BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000957
         (1209 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359477881|ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score = 2023 bits (5240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 999/1209 (82%), Positives = 1099/1209 (90%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQD+ANWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ LKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I QDQEKTE+LK QMQELE +IQ++D KI HTE TLKDLRK+QDQIST TA RSTLF++Q
Sbjct: 228  IEQDQEKTESLKIQMQELENNIQNVDAKIQHTEATLKDLRKLQDQISTKTAERSTLFKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            QKQYAALAEE EDTDEEL  WK  FE  +A  ES ISKLERE +D +TK  FL+Q I+ Y
Sbjct: 288  QKQYAALAEENEDTDEELNEWKTKFEERIALLESKISKLEREMDDTETKGSFLKQTINDY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA  H S  NERDSTIQKLFAR+NLGSLP+ PFSNE ALNF NRI++RL D
Sbjct: 348  IWEISKLQTEAEVHSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFTNRIKTRLMD 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE+DL+DKKKS E+ LK+AWD Y+DAND WK+IEAQKQAK+EIK+GILK I+EKENERDS
Sbjct: 408  LEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEEKENERDS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FELQISN++LSHIDERE  +RIEVERKTNQLAEREFE NIRQKQSEL++++QKIKALNRE
Sbjct: 468  FELQISNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD++A DSEDRVKL+LKK ELENHKKKH+KI+DEYKD+IR VLKGRLP D+DLKKEITQA
Sbjct: 528  KDIMAVDSEDRVKLSLKKGELENHKKKHQKIMDEYKDRIRGVLKGRLPPDKDLKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LRAL  EFDD++SKSREA+KEVNMLQMKI+EV +NLSK  KD+DS+KRFIESKL+SL+QQ
Sbjct: 588  LRALGIEFDDMNSKSREAEKEVNMLQMKIEEVNNNLSKLNKDMDSRKRFIESKLQSLDQQ 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
             FSI++Y K  D AKEKRDVQKSKYNIADGM+QMFDPFERVARAHHVCPCCERPFSAEEE
Sbjct: 648  SFSIESYMKAFDLAKEKRDVQKSKYNIADGMKQMFDPFERVARAHHVCPCCERPFSAEEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQRVKAASSAEHMKVL++ESS+A+S F QLDKLRMVYEEYVK  KETIP+AEKNL
Sbjct: 708  DEFVKKQRVKAASSAEHMKVLAVESSSAESLFLQLDKLRMVYEEYVKXGKETIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
            +ELTEELDQKSQA DDVLGVLAQ+K DK+SVE L+QPVETADRLFQEIQ WQKQVDDLEY
Sbjct: 768  NELTEELDQKSQALDDVLGVLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RGQGVR+MEEIQLEL+   +TKDNL N+LEKLRDEQRYMENDLSNIQIRWHTLREE
Sbjct: 828  KLDFRGQGVRSMEEIQLELNTLQNTKDNLHNDLEKLRDEQRYMENDLSNIQIRWHTLREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            KVKAANTLRDVKKAEEEL+ L+EEK Q+DL EK LAEA GPLSKEKEKLLSDYNDLK KL
Sbjct: 888  KVKAANTLRDVKKAEEELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            + EYE+QAEQK N+QQE+E LLK+ SKIKEYYD +K ER KEL+EK+S SES+++SC  R
Sbjct: 948  DFEYEQQAEQKRNYQQEVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EIL EL++ KD++RNQDQ++RNIEDNLNYR+TKA+VDK   EIE LE+R+LKIGGVS 
Sbjct: 1008 KQEILTELNKSKDLMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSA 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +LGK   ER+RLLSE+NRC GT SVYQ+NIS++KIDLKQ QYKDIDKR+ DQLIQLK
Sbjct: 1068 VEVDLGKLSQERERLLSELNRCHGTTSVYQSNISKHKIDLKQTQYKDIDKRYCDQLIQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID IRIHSDSEGA
Sbjct: 1128 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCIRIHSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS
Sbjct: 1248 DGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIEAQEIFD
Sbjct: 1308 IIEAQEIFD 1316


>gi|449432386|ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 1967 bits (5096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 961/1209 (79%), Positives = 1090/1209 (90%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESV QTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQDEANWPL
Sbjct: 108  MEYKAIESVFQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQA EIKTYKLKLENLQTLKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            ISQDQEKTE++K QMQELEK+IQD+D KIHH E  LKD+RK+QDQIST TA RSTL+++Q
Sbjct: 228  ISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            QKQYAAL+EE EDTDEELK WK  FE  +A  ES +SKLERE ND++TK  FL+Q I+ Y
Sbjct: 288  QKQYAALSEENEDTDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA  HMS  NERDSTI++LFARHNLGS+PN PFS+E A N  NRI+ RL D
Sbjct: 348  IWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVD 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            L++D++DK+ S+++ LK AWD Y+DANDRWKNI+AQK AK +IK GI+K I+EKE+ERDS
Sbjct: 408  LDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEEKESERDS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FELQIS+++LSHIDERE  M+IEVERKTNQLAEREFE  IRQKQS+L+ ++QKIKA+NRE
Sbjct: 468  FELQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD++AGDSEDRVKLALKKAEL+NHKKKH+KIIDEYKDKIR VLKGR P ++DLKKEITQA
Sbjct: 528  KDIMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LRA+  E+DDL+SKSREA+K+VNMLQMKIQEV  NLS+++K+++S+KRF+ESKL+SL+  
Sbjct: 588  LRAVGMEYDDLNSKSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPL 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
             FS+D Y K L+ AKEK+DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF+AEEE
Sbjct: 648  SFSVDLYLKALEGAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQRVKAASSAEHMKVL++ESS++DS+FQQLDKLRMV+EEYVKLS ETIP AEK L
Sbjct: 708  DEFVKKQRVKAASSAEHMKVLAVESSSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKEL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
            H+L EELD+KSQA DDV+GVLAQ+KAD++SVE LVQP++TADRL+QEIQ  QKQVDDL Y
Sbjct: 768  HQLNEELDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RG+GV+T+EEIQ EL+   +TKD L NELEKLRDEQRYMENDL+NIQIRWHTLREE
Sbjct: 828  KLDFRGKGVKTLEEIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            KVKAANTLRDV+KAEEEL+ L EEKGQ+DLDEK LAEA  PLSKEK+KLL+DYN+LK KL
Sbjct: 888  KVKAANTLRDVRKAEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            NREYEE  ++K  FQQE+E LL+  SKIKEY DL+K ER KELQEKK+Q+ES+++ C  R
Sbjct: 948  NREYEELGDKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EIL EL++ KD++RNQDQ+RRNIEDNLNYR+TKA+VD+ A +IESLEE++LKIGGVST
Sbjct: 1008 KQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E E+GK   ER+RLLSE+NR  GTMSVYQ+NIS+NKIDLK  QYKDIDKR+FDQLIQLK
Sbjct: 1068 VEAEIGKLSQERERLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI IHSDSEGA
Sbjct: 1128 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHS
Sbjct: 1248 DGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIE+QEIFD
Sbjct: 1308 IIESQEIFD 1316


>gi|224060335|ref|XP_002300148.1| predicted protein [Populus trichocarpa]
 gi|222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 1942 bits (5031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 966/1209 (79%), Positives = 1076/1209 (88%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDEANWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I QDQEKTE LK Q QELE ++Q++D KIHHTE+TLKD+RK+QDQI+  TA RSTLF +Q
Sbjct: 228  IGQDQEKTEILKVQSQELESNLQNLDAKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAALAEE EDTDEEL+ WK  F+  +A  ES+I KLERE NDM+TK  FL+QNI+ Y
Sbjct: 288  QRQYAALAEENEDTDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA AH S  NERDS IQK++ RHNLG LPNAPFS++ ALN  NR++SRL D
Sbjct: 348  IREISRLQTEAEAHASLKNERDSNIQKMYTRHNLGPLPNAPFSDDVALNLTNRLKSRLVD 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            L++DL+DKK S++  +K A + Y DAN+RWKN EAQKQAK+EIK  IL  I EKE E  S
Sbjct: 408  LDKDLQDKKTSNDTEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNRITEKEREHSS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FE QIS++NLSHIDE+E  MRIEVERKTNQLAEREFE +IRQKQSEL+ ++Q+IK LNRE
Sbjct: 468  FEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQIKVLNRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD+LAGDSEDRVKL+LKK ELENHKKKH+KIIDE KDKIR VLKGRLP D+DLKKEITQ 
Sbjct: 528  KDILAGDSEDRVKLSLKKVELENHKKKHRKIIDECKDKIRGVLKGRLPPDKDLKKEITQT 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LRAL  EFDDL+ KSREA+KEVN+LQMKIQEV +NLSK RKD+DS+KRFIESKL+SL+Q 
Sbjct: 588  LRALGLEFDDLNMKSREAEKEVNVLQMKIQEVNNNLSKQRKDMDSRKRFIESKLQSLDQL 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
             FS+D Y K L+S+KEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE
Sbjct: 648  SFSVDLYLKALESSKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQRVKAASSAEHMKVLS+ESSNAD+ FQQLDKLRMVYEEY K+ KETIP+AEKNL
Sbjct: 708  DEFVKKQRVKAASSAEHMKVLSMESSNADTLFQQLDKLRMVYEEYTKIGKETIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             ELTEEL+QKSQA DDVLGVLAQ KA+K+SVE LVQPVETADRLFQEIQ WQKQVDDLEY
Sbjct: 768  SELTEELEQKSQALDDVLGVLAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RGQGVRTMEE+Q ELS    TKDNL NE+EKLRDEQRYMENDLS+IQIRWH LREE
Sbjct: 828  KLDFRGQGVRTMEEVQSELSSLQGTKDNLHNEVEKLRDEQRYMENDLSHIQIRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            KV AAN LRDVKK+EEELE L+EEK Q++L+EK LAEA GPLS+EKEKL  ++N+LKV+L
Sbjct: 888  KVTAANILRDVKKSEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKVQL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
             REYEEQ +Q  NF+QE++ L++IASKI+EYY+L+K ER KE+QEK S SES+++ C  R
Sbjct: 948  EREYEEQKKQLDNFKQEVDTLVRIASKIREYYNLKKGERLKEMQEKLSLSESQLQGCDAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EIL EL+  K+ VR+QD +RR+IEDNLNYR+ KA+V++   EIESLEER+LKIGG S+
Sbjct: 1008 KQEILAELNDSKNAVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERILKIGGFSS 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
            FE EL K L ER+RLLSE+NR +GTMSVYQ NIS+NKIDLKQ QYKDIDKR+FDQLIQLK
Sbjct: 1068 FEAELAKLLQERERLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKDIDKRYFDQLIQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI IHSDSEGA
Sbjct: 1128 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSYKV+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL+CGILALDEPTTNL
Sbjct: 1188 GTRSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLHCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE+YYRVAKDDHQHS
Sbjct: 1248 DGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIEAQEIFD
Sbjct: 1308 IIEAQEIFD 1316


>gi|356567935|ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score = 1775 bits (4597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 897/1209 (74%), Positives = 1046/1209 (86%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMD+E+PALMGVSKAILENVIFVHQDEANWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHK+QAQEIKTYKLKLENLQTLKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEKTE+ + Q+Q+L+ SIQ++D KIHHTE TLK LRK+Q+QIST TA+RS LF++Q
Sbjct: 228  IAQDQEKTESAECQLQQLDGSIQELDHKIHHTEETLKYLRKLQEQISTKTAQRSILFKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            QKQY AL EEIEDTDEEL  WK  FE  +A  E+ IS+LERE  D+D     L++ I   
Sbjct: 288  QKQYLALTEEIEDTDEELMEWKTKFEERIASLETKISRLERETEDIDCTSSTLKETIAES 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
               I  L +EA AHMS  NERDS+I  LF  +NLGSLP +PFS E ALN  NR++SRL D
Sbjct: 348  IEVIAKLQAEAEAHMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEVALNLTNRVKSRLED 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE+DL+DKKK+++  +KMA+D Y++ANDR K+ EA+ +A    K+GI K I+EK+NE DS
Sbjct: 408  LEKDLDDKKKANDNEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRIEEKKNELDS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             ELQIS+ N S +DERE  +  EV+RK +QL ER+FE N  + + E++++DQKIKA++RE
Sbjct: 468  LELQISDENFSQLDERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVDQKIKAVSRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD++  DS+DRVKL+ KK ELE+ KKKHKKIIDE KDKIR VLKGR+PLD+D+KKEI QA
Sbjct: 528  KDIMVSDSQDRVKLSYKKGELESQKKKHKKIIDEQKDKIRKVLKGRVPLDKDVKKEIMQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LRA+  EFDDL++K REA+KEVN+LQ+KIQEV  NLSKH KD++S+KR+IESKL+SL+QQ
Sbjct: 588  LRAVGAEFDDLNAKYREAEKEVNVLQVKIQEVNSNLSKHHKDLESRKRYIESKLQSLDQQ 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               ID+Y KVL+SAKEKRDVQ+SKYNIADGMRQMFDPFERVARA+HVCPCCERPFS EEE
Sbjct: 648  CSGIDSYLKVLESAKEKRDVQRSKYNIADGMRQMFDPFERVARANHVCPCCERPFSPEEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQRVKA SSA HMKVL++ESSNA+S+FQQLDKLRM+YEEYVKL KETIP +EK L
Sbjct: 708  DSFVKKQRVKATSSAGHMKVLAVESSNAESHFQQLDKLRMLYEEYVKLGKETIPNSEKEL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L EE+D KSQA DDVLGVLAQ+K+DK+ VE LVQPVE ADR+FQEIQ  QKQV+DLE 
Sbjct: 768  QQLKEEMDDKSQALDDVLGVLAQVKSDKDLVETLVQPVENADRIFQEIQALQKQVEDLED 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
              + R QGVRT+EEIQLEL+   STK+NLQ+EL++L+DEQRYME DLS+IQ+RWHT+REE
Sbjct: 828  KHNFRAQGVRTLEEIQLELNTLQSTKENLQSELDRLKDEQRYMEKDLSSIQMRWHTVREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K KA N L+ VK+ EEELE L EEK Q+DLDEK LA+A GPLSKE +KLL+++N+LK++L
Sbjct: 888  KTKATNILQGVKRLEEELERLTEEKTQVDLDEKHLADALGPLSKETDKLLANHNELKIRL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
             REYE+ AEQK ++QQE + L K+ SKIK Y DL+K +R KELQEKKS SES+++S   R
Sbjct: 948  EREYEDLAEQKRSYQQEAQALFKMNSKIKTYSDLKKGDRLKELQEKKSSSESQLQSFDTR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EIL EL++ KD++R QDQ++RNIEDNLNYR+TKA+VD+ A EIE++EE +LK G +ST
Sbjct: 1008 KQEILAELNKSKDLMRGQDQLKRNIEDNLNYRKTKAEVDELAHEIETMEENILKAGRIST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             ETEL K   ER+RLLSE+NRC+GTMSVYQ+NIS+NK+DLKQAQYKDIDKR+FDQLIQLK
Sbjct: 1068 VETELQKLSQERERLLSELNRCRGTMSVYQSNISKNKVDLKQAQYKDIDKRYFDQLIQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY+ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI IHSDSEGA
Sbjct: 1128 TTEMANKDLDRYYSALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE+YYRVAKDDHQHS
Sbjct: 1248 DGPNAESLAAALVRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIE+QEIFD
Sbjct: 1308 IIESQEIFD 1316


>gi|18402837|ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]
 gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50
 gi|7110148|gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana]
 gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana]
 gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana]
 gi|29028758|gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana]
 gi|330253520|gb|AEC08614.1| DNA repair protein RAD50 [Arabidopsis thaliana]
          Length = 1316

 Score = 1768 bits (4580), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 873/1209 (72%), Positives = 1028/1209 (85%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT+KLKLENLQTLKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQE+TE+ K QM ELE S+Q +D ++H+ E+ LKDLRK+QDQ+S  TA RSTLF++Q
Sbjct: 228  IAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLKDLRKLQDQVSIKTAERSTLFKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL EE EDT EELK WK+ FE  +A   + I K+ERE  D +T I  L      Y
Sbjct: 288  QRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA AHM   NERDSTIQ +F  +NLG++P+ PFS E  LN  NRI+SRL +
Sbjct: 348  MLEISKLQTEAEAHMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEVVLNLTNRIKSRLGE 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL DKKKS+E AL  AWD Y+DANDRWK+IEAQK+AK EIK GI K I+EKE ERDS
Sbjct: 408  LEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FE +IS +++   DERE ++++E+ERKT Q +ER FE  I QKQ E+++++ KIK LNRE
Sbjct: 468  FEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQKQHEIYSLEHKIKTLNRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            +DV+AGD+EDRVKL+LKK E EN KKKHKKIIDE KD+IR VLKGRLP ++D+K+EI QA
Sbjct: 528  RDVMAGDAEDRVKLSLKKTEQENLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LR++  E+DDLS KSREA+KEVNMLQMKIQEV ++L KH KD +S+KR+IESKL++L Q+
Sbjct: 588  LRSIEREYDDLSLKSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQE 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
              +ID Y K+L+SAK+KRD +K +YN+A+GMRQMF+PFE+ AR  H CPCCER F+A+EE
Sbjct: 648  SVTIDAYPKLLESAKDKRDDRKREYNMANGMRQMFEPFEKRARQEHSCPCCERSFTADEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
              F+KKQRVKA+S+ EH+K L++ESSNADS FQQLDKLR V+EEY KL+ E IP+AEK L
Sbjct: 708  ASFIKKQRVKASSTGEHLKALAVESSNADSVFQQLDKLRAVFEEYSKLTTEIIPLAEKTL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             E TEEL QKS+A DDVLG+ AQIKADK+S+E LVQP+E ADR+FQEI  +QKQ++DLEY
Sbjct: 768  QEHTEELGQKSEALDDVLGISAQIKADKDSIEALVQPLENADRIFQEIVSYQKQIEDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RG GV+TMEEIQ ELS   S+KD L  ELEKLRD+Q YME D+S +Q RWH +REE
Sbjct: 828  KLDFRGLGVKTMEEIQSELSSLQSSKDKLHGELEKLRDDQIYMERDISCLQARWHAVREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K KAAN LRDV KAEE+LE L EEK QLDLD K L EA GPLSKEKE+LLSDYND+K++ 
Sbjct: 888  KAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRR 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            N+EYEE AE+K N+QQE+E LLK + KI EY+DL+K ER  ++QEK+  S+S+++SC+ R
Sbjct: 948  NQEYEELAEKKRNYQQEVEALLKASYKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
             +E+  EL+R KD++RNQDQ+RRNIEDNLNYR TKAKV++   EIESLEE++L IGG++ 
Sbjct: 1008 KNELAGELNRNKDLMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIAA 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E E+ K L ER+RLLSE+NRC+GT+SVY+++IS+N+++LKQAQYKDIDKRHFDQLIQLK
Sbjct: 1068 VEAEIVKILRERERLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD+DYIRIHSDSEGA
Sbjct: 1128 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSYKVLMQTGD ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPN+ESLA AL RIMEDRKGQENFQLIVITHDERFAQ+IGQRQHAEKYYRVAKDD QHS
Sbjct: 1248 DGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIEAQEIFD
Sbjct: 1308 IIEAQEIFD 1316


>gi|449518167|ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score = 1717 bits (4448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 842/1087 (77%), Positives = 970/1087 (89%)

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            +DQEKTE++K QMQELEK+IQD+D KIHH E  LKD+RK+QDQIST TA RSTL+++QQK
Sbjct: 2    EDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQK 61

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            QYAAL+EE EDTDEELK WK  FE  +A  ES +SKLERE ND++TK  FL+Q I+ Y  
Sbjct: 62   QYAALSEENEDTDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIW 121

Query: 243  EITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLE 302
            EI+ L +EA  HMS  NERDSTI++LFARHNLGS+PN PFS+E A N  NRI+ RL DL+
Sbjct: 122  EISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLD 181

Query: 303  RDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFE 362
            +D++DK+ S+++ LK AWD Y+DANDRWKNI+AQK AK +IK GI+K I+EKE+ERDSFE
Sbjct: 182  KDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEEKESERDSFE 241

Query: 363  LQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKD 422
            LQIS+++LSHIDERE  M+IEVERKTNQLAEREFE  IRQKQS+L+ ++QKIKA+NREKD
Sbjct: 242  LQISHVDLSHIDEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKD 301

Query: 423  VLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALR 482
            ++AGDSEDRVKLALKKAEL+NHKKKH+KIIDEYKDKIR VLKGR P ++DLKKEITQALR
Sbjct: 302  IMAGDSEDRVKLALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALR 361

Query: 483  ALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIF 542
            A+  E+DDL+SKSREA+K+VNMLQMKIQEV  NLS+++K+++S+KRF+ESKL+SL+   F
Sbjct: 362  AVGMEYDDLNSKSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSF 421

Query: 543  SIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDE 602
            S+D Y K L+ AKEK+DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF+AEEEDE
Sbjct: 422  SVDLYLKALEGAKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDE 481

Query: 603  FVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHE 662
            FVKKQRVKAASSAEHMKVL++ESS++DS+FQQLDKLRMV+EEYVKLS ETIP AEK LH+
Sbjct: 482  FVKKQRVKAASSAEHMKVLAVESSSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQ 541

Query: 663  LTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYML 722
            L EELD+KSQA DDV+GVLAQ+KAD++SVE LVQP++TADRL+QEIQ  QKQVDDL Y L
Sbjct: 542  LNEELDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKL 601

Query: 723  DSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKV 782
            D RG+GV+T+EEIQ EL+   +TKD L NELEKLRDEQRYMENDL+NIQIRWHTLREEKV
Sbjct: 602  DFRGKGVKTLEEIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKV 661

Query: 783  KAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR 842
            KAANTLRDV+KAEEEL+ L EEKGQ+DLDEK LAEA  PLSKEK+KLL+DYN+LK KLNR
Sbjct: 662  KAANTLRDVRKAEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNR 721

Query: 843  EYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTD 902
            EYEE  ++K  FQQE+E LL+  SKIKEY DL+K ER KELQEKK+Q+ES+++ C  R  
Sbjct: 722  EYEELGDKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQ 781

Query: 903  EILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE 962
            EIL EL++ KD++RNQDQ+RRNIEDNLNYR+TKA+VD+ A +IESLEE++LKIGGVST E
Sbjct: 782  EILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVE 841

Query: 963  TELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
             E+GK   ER+RLLSE+NR  GTMSVYQ+NIS+NKIDLK  QYKDIDKR+FDQLIQLKTT
Sbjct: 842  AEIGKLSQERERLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTT 901

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT 1082
            EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI IHSDSEGAGT
Sbjct: 902  EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGT 961

Query: 1083 RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1142
            RSYSY+VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG
Sbjct: 962  RSYSYRVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1021

Query: 1143 PNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            PNAESLAAAL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV KDDHQHSII
Sbjct: 1022 PNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDHQHSII 1081

Query: 1203 EAQEIFD 1209
            E+QEIFD
Sbjct: 1082 ESQEIFD 1088


>gi|255563610|ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
 gi|223538045|gb|EEF39658.1| DNA repair protein RAD50, putative [Ricinus communis]
          Length = 1256

 Score = 1665 bits (4312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 873/1154 (75%), Positives = 995/1154 (86%), Gaps = 13/1154 (1%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDEANWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKD+AYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDSAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QD+E+TE+ K Q+Q LE  +Q++D KIH  + TLKDLR +Q++I T T  R TLF++Q
Sbjct: 228  ITQDEERTESSKVQIQALENKVQNVDVKIHQIQTTLKDLRNLQEKIMTKTVERRTLFKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QY AL EE ED DE+L  WK  F+  VA+ ES ISKL+REKND + K  FL++NI  Y
Sbjct: 288  QRQYEALEEENEDPDEDLMEWKTKFDEKVAQMESSISKLKREKNDTEIKTSFLKENITEY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA AH S  NERDSTIQKL ARHNLGSLP AP S++ ALN  NR++SRL+D
Sbjct: 348  IREISRLQTEAEAHNSLKNERDSTIQKLCARHNLGSLPQAPLSDDIALNLTNRLKSRLTD 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            L +DL+DKK S++  +K A D YLD NDRWK+I+AQKQAK EIK GIL  I +KE++R S
Sbjct: 408  LRKDLQDKKTSNDTEVKTAEDCYLDVNDRWKHIDAQKQAKREIKNGILDRITKKEHDRAS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FE +IS++NLSHIDERE  MRIEVERKTNQLAER FE NIRQKQ+EL+ ++Q+IKAL+ E
Sbjct: 468  FEEEISHVNLSHIDEREKNMRIEVERKTNQLAERAFESNIRQKQTELYGIEQEIKALDGE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD+LA  SEDRVKL+LKKA+LENHKKKHKKIIDE+KD+IR VLKGR+P D+D+KKEITQA
Sbjct: 528  KDILAIYSEDRVKLSLKKADLENHKKKHKKIIDEHKDRIRGVLKGRVPSDKDMKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
            LRAL  EFDDL+SKS EA+KEVN+LQMKIQEV +NLSK RKD+DS+KRFIESKL SL+QQ
Sbjct: 588  LRALAVEFDDLNSKSHEAEKEVNVLQMKIQEVNNNLSKLRKDMDSRKRFIESKLHSLDQQ 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
              ++D Y KVL SAK+KRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE
Sbjct: 648  SLTVDCYLKVLGSAKDKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQRVKAASSAEHMKVL+ ESSNADS FQQLDKLRM+YEE+VK+ KETIP+AEKNL
Sbjct: 708  DEFVKKQRVKAASSAEHMKVLAAESSNADSNFQQLDKLRMLYEEFVKIEKETIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
            H+LTEELDQKSQA DDVLGVLAQIKADK+SVE LVQPVETADRL+QEIQ WQKQVDDLEY
Sbjct: 768  HDLTEELDQKSQALDDVLGVLAQIKADKDSVEALVQPVETADRLYQEIQTWQKQVDDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD + QG R+MEEI  ELS    TK+ L NELEKLRDE+RYMENDLS+I          
Sbjct: 828  KLDIQRQGGRSMEEIHSELSSLQDTKEALHNELEKLRDERRYMENDLSHI---------- 877

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
                 NTL +VKKAEEELEHL+EEK Q++LDEK LAEA  PLSKE+EKL S  ++LKVKL
Sbjct: 878  ---XXNTLLNVKKAEEELEHLIEEKNQVELDEKHLAEALVPLSKEREKLRSYNSELKVKL 934

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
             +E EEQ ++  ++Q +++ LLKI SKIKEY DL+K ER KE+QEK S  ES+++SC  R
Sbjct: 935  EQELEEQKKELDSYQWDVDTLLKINSKIKEYNDLKKRERLKEMQEKLSLLESQLQSCDDR 994

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EIL EL++ ++  +NQ+ + R I+DNLNYR+TKA+VDK   EIESLEE +LKIGGVST
Sbjct: 995  KKEILDELNKCENANQNQESLYRKIQDNLNYRKTKAEVDKLTQEIESLEEEMLKIGGVST 1054

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
            FE EL +HL ER+ LLSE+N+C+GTMSVYQ+NIS+NK+DLKQAQYKDIDKR+FDQLIQLK
Sbjct: 1055 FEGELARHLQERESLLSELNKCRGTMSVYQSNISKNKVDLKQAQYKDIDKRYFDQLIQLK 1114

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI IHSDSEGA
Sbjct: 1115 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGA 1174

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSYKV+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1175 GTRSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1234

Query: 1141 DGPNAESLAAALHR 1154
            DGPNAESLAAAL R
Sbjct: 1235 DGPNAESLAAALLR 1248


>gi|297822949|ref|XP_002879357.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325196|gb|EFH55616.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1234

 Score = 1565 bits (4051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 800/1204 (66%), Positives = 946/1204 (78%), Gaps = 86/1204 (7%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT+KLKLENLQTLKDAAYKLRES
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRES 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQE+TE+ K QM ELE SIQ +D ++H+ E+ LKDLRK+QDQ+S  TA RSTLF++Q
Sbjct: 228  IAQDQERTESSKVQMLELETSIQKVDAEVHNKEMMLKDLRKLQDQVSRKTAERSTLFKEQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYA L EE EDT EELK WK+ FE  +A  E+ I K+ERE +D  T I  L      Y
Sbjct: 288  QRQYAELPEENEDTIEELKEWKSKFEERIALLETKIRKMEREMDDTATTIYSLHNAKTNY 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              EI+ L +EA AHM   NERDSTIQK+F+ HNLG++P+ PF  E  LN  NRI+SRL +
Sbjct: 348  MLEISKLQTEAEAHMLLKNERDSTIQKIFSHHNLGNVPSTPFGTEVVLNLTNRIKSRLGE 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL DKKKS+E AL  AWD Y+DANDRWK+IEAQK+AK EIK GI K I+EKE ERDS
Sbjct: 408  LEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDS 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            FE +IS +++   DERE +++IE+ERKT Q +E  FE  I QKQ E+++M+ KIK LNRE
Sbjct: 468  FEFEISTVDVKQTDEREKQVQIELERKTKQNSELGFESKIEQKQHEIYSMEHKIKTLNRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            +DV+AGD+EDRVKL+LKK E EN +KKHKK+                             
Sbjct: 528  RDVMAGDAEDRVKLSLKKTEQENLRKKHKKM----------------------------- 558

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++  E+DDLS KSREA+KEVNMLQMKIQEV ++L KH KD +S+K++IESKL++L Q+
Sbjct: 559  --SIEREYDDLSLKSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKKYIESKLQALKQE 616

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
              +ID Y K+L+SAK++RD +KSKYN+A+GMR+MF+PFE +AR HH CPCCER F+ +EE
Sbjct: 617  SVTIDAYPKLLESAKDERDDRKSKYNMANGMRKMFEPFEDLARQHHYCPCCERSFTTDEE 676

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            + FVKKQRVKA+++ E +K L++ESSNADS FQQLDKLR V+EEY KL+ E IP+AEK+L
Sbjct: 677  NSFVKKQRVKASTTGEQLKKLAVESSNADSVFQQLDKLRAVFEEYSKLTSEIIPLAEKSL 736

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             E TEEL QKSQA DDVLG+ AQIKADK+S+E LV P+E ADR FQEI  +QKQ++DLEY
Sbjct: 737  QEHTEELGQKSQALDDVLGISAQIKADKDSIEALVHPLENADRTFQEIVSYQKQIEDLEY 796

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RG GV+TMEEIQ ELS   S+KD L  ELEKLRD+Q YME D+S +Q RWH +REE
Sbjct: 797  KLDFRGLGVKTMEEIQSELSSLQSSKDKLHGELEKLRDDQIYMERDISCLQARWHAVREE 856

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K KAAN LRDV KAEE+LE L EEK QLDLD K LAEA GPLSKEKE+LLSDYND+K++ 
Sbjct: 857  KAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLAEALGPLSKEKEQLLSDYNDMKIRR 916

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKE--------YYDLRKDERFKELQEKKSQSES 892
            N+EYEE AE+K N+QQE+E LLK +SKI E        Y+DL+K ER  ++QEK+  SES
Sbjct: 917  NQEYEELAEKKRNYQQEVEALLKASSKINEYAYSCFTRYHDLKKGERLNDIQEKQRLSES 976

Query: 893  EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV 952
            +++SC+ R +E+  EL+R KD++RNQDQ+RRNIEDNLNYR TKAKV++            
Sbjct: 977  QLQSCEARKNELAGELNRNKDLMRNQDQLRRNIEDNLNYRTTKAKVEELTP--------- 1027

Query: 953  LKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRH 1012
                           HL     ++  +NRC+GT+SVY+++IS+N+++LK AQYKDIDKRH
Sbjct: 1028 --------------IHLFS---MMLRLNRCRGTVSVYESSISKNRVELKAAQYKDIDKRH 1070

Query: 1013 FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIR 1072
            FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD+DYIR
Sbjct: 1071 FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIR 1130

Query: 1073 IHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA 1132
            IHSDSEGAGTRSYSY                     KVLASLIIRLALAETFCLNCGILA
Sbjct: 1131 IHSDSEGAGTRSYSY---------------------KVLASLIIRLALAETFCLNCGILA 1169

Query: 1133 LDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV 1192
            LDEPTTNLDGPN+ESLA AL RIMEDRKGQENFQLIVITHDERFAQ+IGQRQHAEKYYRV
Sbjct: 1170 LDEPTTNLDGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRV 1229

Query: 1193 AKDD 1196
            AKDD
Sbjct: 1230 AKDD 1233


>gi|157863716|gb|ABV90879.1| DNA repair protein Rad50 [Triticum monococcum]
          Length = 1316

 Score = 1520 bits (3936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 763/1209 (63%), Positives = 968/1209 (80%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRGS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRC+GT+SVYQ+NISR+K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCRGTISVYQSNISRHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863718|gb|ABV90880.1| DNA repair protein Rad50 [Aegilops tauschii]
          Length = 1316

 Score = 1519 bits (3933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 761/1209 (62%), Positives = 968/1209 (80%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  ITQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +L+K +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLAKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KV +   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVPAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863724|gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum]
          Length = 1316

 Score = 1518 bits (3931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 762/1209 (63%), Positives = 967/1209 (79%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRGS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLER  ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLERGMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863726|gb|ABV90884.1| DNA repair protein Rad50 [Aegilops tauschii]
          Length = 1316

 Score = 1516 bits (3926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 761/1209 (62%), Positives = 965/1209 (79%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR + RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKGRLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA +++ + QMKI     +L+K +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVDSEYNDLNSKSQEAGQQLKLAQMKIDAAKSHLAKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAGVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDL RYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLGRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863728|gb|ABV90885.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score = 1516 bits (3925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 759/1209 (62%), Positives = 969/1209 (80%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+++ 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKPQKVLDAKRKHLNSKLQSISKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PF +VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFGKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VE+L++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEILLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV+++++IQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDKIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H   ++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQGKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME+RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMENRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863730|gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score = 1515 bits (3923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/1209 (62%), Positives = 968/1209 (80%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKK+FDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKEFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            ++QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  EQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIK L+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKTLHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863720|gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score = 1514 bits (3919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 757/1209 (62%), Positives = 968/1209 (80%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  QQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIKAL+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGR P ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRPPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+++ 
Sbjct: 588  FGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKPQKVLDAKRKHLNSKLQSISKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PF +VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFGKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VE+L++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEILLRPVDTIDRHVQEIQELEPQVKDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++++QLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDKVQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  EEK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDS GA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSGGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME+RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMENRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|157863722|gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score = 1513 bits (3916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 758/1209 (62%), Positives = 966/1209 (79%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKF DIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFGDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++L+ +IQ +++KI  TE ++ DLRK+Q+QIST    RST F  Q
Sbjct: 228  IAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            ++QYAAL+EE EDTDEELK W+  FE  +A  E+ I+KLERE ND   K   L + I+  
Sbjct: 288  EQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AHMS  +ERDS I+ +F +HNLG +P+APF+N+ A+N  NR ++RLS+
Sbjct: 348  TREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL++KKK++E  L+  W  YL  N R+  ++ Q Q+K E K G+L+ IK+KENERD+
Sbjct: 408  LEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S  NL+ IDERE  ++IEVERKT  L ER++++ I QK+SE++ +D KIK L+RE
Sbjct: 468  AETELSRHNLARIDERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKTLHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  KKK KKI DE+KDK R VLKGRLP ++D+KKEITQA
Sbjct: 528  KDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++ +E++DL+SKS+EA++++ + QMKI     +LSK +K +D+K++ + SKL+S+ + 
Sbjct: 588  FGSVGSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSIAKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ Y K+L  A ++RD Q + ++ A GMRQM++PFE+VAR HH CPCC+R F+ +EE
Sbjct: 648  SVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR    S+AE +KVL+   S A+  F QLD LR++Y+EYVKL KETIP+AEK+L
Sbjct: 708  DLFVKKQRTTGTSTAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L+ +  +K Q  DD++ VLAQ+K D++ VEVL++PV+T DR  QEIQ  + QV DLEY
Sbjct: 768  EQLSADKSEKEQISDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVRDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++++EIQLEL      +D L  E++ LRD+Q+ +  DLSN Q+RWH LREE
Sbjct: 828  KLDSRGQGVKSVDEIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K++A++ L   KKAEE+L H  +EK QL LD+K L EA  PLSKE+E LL +Y  LK + 
Sbjct: 888  KLRASSVLLKFKKAEEDLVHFAKEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERF 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY++ AE+K  FQQEI++L  + ++IK Y D  K E+  ELQE+ + S S+++ C+ R
Sbjct: 948  DQEYDQLAERKRGFQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEAR 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              +I VELD+ K ++R+QDQ++RNI+DNLNYR+TKA+VD+   +IE LE+ VL IG +ST
Sbjct: 1008 KQDISVELDKSKQLLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+Q K
Sbjct: 1068 IEADLKRHAQEKERLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQQK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYR++KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|357149065|ref|XP_003574988.1| PREDICTED: DNA repair protein RAD50-like [Brachypodium distachyon]
          Length = 1316

 Score = 1504 bits (3894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 746/1209 (61%), Positives = 964/1209 (79%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIK+LHKDQAQEIKT++LKLENLQTLKD AY+LR+S
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKRLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDS 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM++ + +IQ +++KI  TE ++ +LR++Q+QIST T+ RST    +
Sbjct: 228  IAQDQEKSDALKTQMEDSKTNIQAVENKILRTETSIDELRRLQEQISTKTSARSTYVTLR 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            +KQYAAL+EE EDTDEEL+ W+  FE  +A + + ISKLER+ ND   K   L + I+  
Sbjct: 288  EKQYAALSEENEDTDEELEEWRTKFEERIALQGTKISKLERDMNDEKAKSSLLSKTINDS 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T  I  L +EA AH+S  +ERDS I+K+F +HNLG +P+ PF+N+ A+N  NR R+RLS+
Sbjct: 348  TLHIGKLQAEADAHISMKHERDSAIRKIFTKHNLGPIPDPPFTNDVAMNLTNRTRARLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL+DKKKS+E  L+  W  YL  N R+  ++ Q Q+K E K GIL+ +K+KENERD+
Sbjct: 408  LEDDLQDKKKSNETQLEFLWGRYLKVNARYSEVDGQIQSKKESKLGILRRMKDKENERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E ++S LNL+ IDERE  ++IEVERKT  LAER+++  I QK++E++ MD KIKAL+RE
Sbjct: 468  AEKELSKLNLARIDERERYLQIEVERKTVALAERDYDKIISQKRTEIYTMDHKIKALHRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +A D++DRVKL LKK ELE  K K  KI DE+ DKIR+VLKGR P ++D+KKEITQA
Sbjct: 528  KDNIASDADDRVKLELKKYELEKCKSKLHKIYDEHNDKIRNVLKGRRPPEKDVKKEITQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
               +  E++ L+SKS+EA++++ ++QMKI+    +LSK +KD+D+K+R + SKL+S+ + 
Sbjct: 588  FGCIDAEYNGLNSKSQEAEQQLKLVQMKIEGARSHLSKLQKDLDAKRRHLNSKLQSITKV 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+T+ KVL+ A E RD   S+  +A+G+++M+DPFE++AR  H CPCC+R F+ +EE
Sbjct: 648  SVDINTFPKVLEGAMEARDKLNSEKIVANGLQKMYDPFEKMAREQHKCPCCDRGFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            D FVKKQR   +S+A+ MK L +E SNA+ +FQQLD LR++Y++YVKL KETI  AEK+L
Sbjct: 708  DLFVKKQRTFGSSNADLMKALEMELSNAEDFFQQLDNLRVIYDQYVKLGKETITSAEKDL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L  +  +K+Q F+D++ VLAQ+K D++ VE+L+ P +  DR  QEIQ  + +V+DLEY
Sbjct: 768  KQLLADESEKAQTFEDLVSVLAQVKMDRDGVEILLHPSDAIDRHVQEIQELEPEVEDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDSRGQGV++ E+IQLEL+ ++ T+D L +E++ LRD+ + +  D +N Q+RWH +REE
Sbjct: 828  KLDSRGQGVKSKEDIQLELNSAMRTRDTLLSEMDDLRDQHKMLSEDFTNAQMRWHAVREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K+ A++ L   KKAEE+L    EEK QL LD+K L EA  PL KE E LL ++  LK +L
Sbjct: 888  KLSASSILHTFKKAEEDLVLFAEEKEQLTLDQKHLEEALVPLRKESESLLQEHKALKERL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY+  AE++  FQQEI+ L  + ++IKEY D +K ER  ELQE+ + S S+++ C+ +
Sbjct: 948  DQEYDHLAERRRGFQQEIDALGTLNTRIKEYVDSKKAERLHELQERHTLSLSQLQECEAK 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
              EI  ELDR K+ +R+QDQ +RNI+DNLNYR+TKA+VD+   +IE LE+ VL  G +ST
Sbjct: 1008 KQEISDELDRSKEKLRSQDQFKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSFGSMST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L ++  E++RLLSE NRCQGT+SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKRNAQEKERLLSEYNRCQGTLSVYQSNISKHKVELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDID I I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQ G AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLI+ITHDERFAQLIGQRQ AEKYYRV+KD+ QHS
Sbjct: 1248 DGPNAESLAAALLRIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRVSKDEQQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|218190791|gb|EEC73218.1| hypothetical protein OsI_07303 [Oryza sativa Indica Group]
          Length = 1323

 Score = 1466 bits (3796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 740/1216 (60%), Positives = 956/1216 (78%), Gaps = 7/1216 (0%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR++
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDN 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM+EL  ++Q ++DKI  TE +L DLR++Q +I++ T+ R+T F  Q
Sbjct: 228  IAQDQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQQEINSSTSARTTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTD+ELK W+  FE  +A  ++ ISKLER+ +D +T   FL + I+  
Sbjct: 288  QQQYAALSEENEDTDDELKEWQTKFEERMALLQNKISKLERDVDDENTTSSFLSKAINDL 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              E   L +EA AHMS  +ERDS I+K+F +HNLG +P+AP ++ AA++  N  +++LS+
Sbjct: 348  MRETGRLQAEADAHMSVKHERDSAIRKIFTKHNLGPIPDAPLTDAAAMHLTNITKAKLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            L  DL+DKKKS+E   +  W  YL+ N R+  +  Q ++K+  K GI + +K+KE+ERD+
Sbjct: 408  LNDDLQDKKKSNEAQKQFLWGRYLEVNTRYSEVVGQIESKVASKKGISRRMKDKESERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E+ +S  NL  IDE+E  ++IEVERK   L ER ++  I QK++E+F++DQKIK L  E
Sbjct: 468  AEMDLSKYNLPRIDEKEKHLQIEVERKALALGERNYDSIINQKRTEIFSLDQKIKTLQWE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +  DS DRV L +KK ELE  KKK  KI DE+KDKIR V KGR+P ++++KKE++QA
Sbjct: 528  KDSIISDSNDRVLLDVKKDELEETKKKLNKIYDEHKDKIRSVFKGRIPSEKEVKKELSQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++  E++DL+SKS+EA +E+ ++QMKI +   +LSK +K++D+K+ ++ESKL+S+ + 
Sbjct: 588  FGSVDREYNDLNSKSQEAAQELKLVQMKILDARSHLSKLQKELDAKRSYVESKLQSITKM 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ + K L  A ++R+  K+  + A GMRQM++PFE +AR  H+CPCC+R F+ +EE
Sbjct: 648  SADINMFPKHLKDAMDEREKHKNNLSYAKGMRQMYEPFENLARELHMCPCCQRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQR    S+AE M  +S E SNA+ +FQQL+KL   YEE+VKL K+ IP+AEKNL
Sbjct: 708  DEFVKKQRTTCESTAERMNKISFECSNAEDFFQQLNKLNATYEEFVKLGKDAIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L  +  +K+Q FDD + VLAQ+K DK++V+VL+QPVE  DR  QEIQ    QV++LEY
Sbjct: 768  KQLLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVEVIDRHVQEIQQLGPQVENLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RGQGV+++E+IQLEL+    T+D L NE++ LRD+QR + + L+N Q+RWH +REE
Sbjct: 828  KLDVRGQGVKSLEQIQLELNSLQRTRDTLNNEVDDLRDQQRTLTDGLTNAQMRWHDIREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K+KA+  +   +KAEE+L HL EEK +L L+EK L E+ GPLSKE+E LL ++  LK KL
Sbjct: 888  KLKASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGPLSKERESLLQEHEALKEKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY + AE+K  FQQEI+ L     +IK Y + +K E+  ELQEK +Q +S++   K R
Sbjct: 948  DQEYHQLAERKREFQQEIDALETHNERIKGYLNSKKGEKLNELQEKHTQLQSDLHKSKER 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
             +E   EL + K+++++QDQ++RNI+DNLNYR TKA+V++   EIE LE++VL IG +ST
Sbjct: 1008 KEEKSAELSKNKELLKSQDQLKRNIDDNLNYRRTKAEVERLTHEIELLEDKVLSIGSLST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L ++  E+DRLLSE NRCQGT SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKQYSQEKDRLLSEYNRCQGTQSVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 -------TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI 1073
                   TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDIDYI I
Sbjct: 1128 VDGMNAQTTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDYISI 1187

Query: 1074 HSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1133
            +SDSEGAGTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL
Sbjct: 1188 NSDSEGAGTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1247

Query: 1134 DEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVA 1193
            DEPTTNLDGPNAESLA AL RIME RKGQENFQLIVITHDERFAQLIGQRQ AEKYYRV+
Sbjct: 1248 DEPTTNLDGPNAESLAGALLRIMESRKGQENFQLIVITHDERFAQLIGQRQLAEKYYRVS 1307

Query: 1194 KDDHQHSIIEAQEIFD 1209
            KD+HQHS IEAQEIFD
Sbjct: 1308 KDEHQHSKIEAQEIFD 1323


>gi|115446227|ref|NP_001046893.1| Os02g0497500 [Oryza sativa Japonica Group]
 gi|41056568|gb|AAP34688.2| DNA repair-recombination protein [Oryza sativa Japonica Group]
 gi|113536424|dbj|BAF08807.1| Os02g0497500 [Oryza sativa Japonica Group]
          Length = 1316

 Score = 1464 bits (3789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 742/1209 (61%), Positives = 959/1209 (79%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR++
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDN 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++ALK QM+EL  ++Q ++DKI  TE +L DLR++Q +I++ T+ R+T F  Q
Sbjct: 228  IAQDQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQQEINSSTSARTTYFTLQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            Q+QYAAL+EE EDTD+ELK W+  FE  +A  ++ ISKLER+ +D +T   FL + I+  
Sbjct: 288  QQQYAALSEENEDTDDELKEWQTKFEERMALLQNKISKLERDVDDENTTSSFLSKAINDL 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              E   L +EA AHMS  +ERDS I+K+F +HNLG +P+AP ++ AA++  N  +++LS+
Sbjct: 348  MRETGRLQAEADAHMSVKHERDSAIRKIFTKHNLGPIPDAPLTDAAAMHLTNITKAKLSN 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            L  DL+DKKKS+E   +  W  YL+ N R+  +  Q ++K+  K GI + +K+KE+ERD+
Sbjct: 408  LNDDLQDKKKSNEAQKQFLWGRYLEVNTRYSEVVGQIESKVASKKGISRRMKDKESERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E+ +S  NL  IDE+E  ++IEVERK   L ER ++  + QK++E+F++DQKIK L  E
Sbjct: 468  AEMDLSKYNLPRIDEKERHLQIEVERKALALGERNYDSIVNQKRTEIFSLDQKIKTLQWE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD +  DS DRV L +KK ELE  KKK KKI DE+KDKIR V KGR P ++++KKE++QA
Sbjct: 528  KDSIISDSNDRVLLDVKKDELEESKKKLKKIFDEHKDKIRIVFKGRTPSEKEVKKELSQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
              ++  E++DL+SKS+EA +E+ ++QMKI +   +LSK +K++D+K+ ++ESKL+S+ + 
Sbjct: 588  FGSVDREYNDLNSKSQEAAQELKLVQMKILDARSHLSKLQKELDAKRSYVESKLQSITKM 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
               I+ + K L  A ++R+ QK+  + A GMRQM++PFE +AR  H+CPCC+R F+ +EE
Sbjct: 648  SADINMFPKHLKDAMDEREKQKNNLSYAKGMRQMYEPFENLARELHMCPCCQRAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQR    S+A+ M  +SLE SNA+ +FQQL+KL   YEE+VKL KE IP+AEKNL
Sbjct: 708  DEFVKKQRTTCESTADRMNKISLECSNAEDFFQQLNKLNATYEEFVKLGKEAIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
             +L  +  +K+Q FDD + VLAQ+K DK++V+VL+QPVET DR  QEIQ    QV++LEY
Sbjct: 768  KQLLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVETIDRHVQEIQQLGPQVENLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LD RGQGV+++E+IQLEL+    T+D L NE++ LRD+QR + + L+N Q+RWH +REE
Sbjct: 828  KLDVRGQGVKSLEQIQLELNSVQRTRDTLNNEVDDLRDQQRTLTDGLTNAQMRWHDIREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            K+KA+  +   +KAEE+L HL EEK +L L+EK L E+ GPLSKE+E LL ++  LK KL
Sbjct: 888  KLKASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGPLSKERESLLQEHEALKEKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            ++EY + AE+K  FQQEI+ L     +IK Y + +K E+  ELQEK +Q +S+++  K R
Sbjct: 948  DQEYHQLAERKREFQQEIDALETHNERIKGYLNSKKGEKLNELQEKHTQLQSDLQKSKER 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
             +E   EL + K+++++QDQ++RNI+DNLNYR TK +V++   EIE LE+++L IG +ST
Sbjct: 1008 KEEKSAELSKNKELLKSQDQLKRNIDDNLNYRRTKDEVERLTHEIELLEDKILSIGSLST 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E+DRLLSE NRCQGT SVYQ+NIS++K++LKQ QYKDI+KR+F+QL+QLK
Sbjct: 1068 IEADLKQHSQEKDRLLSEYNRCQGTQSVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELWQQTYRGQDIDYI I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDYISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLA AL RIME RKGQENFQLIVITHDERFAQLIGQRQ AEKYYRV+KD+HQHS
Sbjct: 1248 DGPNAESLAGALLRIMESRKGQENFQLIVITHDERFAQLIGQRQLAEKYYRVSKDEHQHS 1307

Query: 1201 IIEAQEIFD 1209
             IEAQEIFD
Sbjct: 1308 KIEAQEIFD 1316


>gi|413922540|gb|AFW62472.1| hypothetical protein ZEAMMB73_226461 [Zea mays]
          Length = 1316

 Score = 1440 bits (3727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1209 (60%), Positives = 948/1209 (78%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQ QEIKT++LKLENLQT+KD A+KLRE+
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQMQEIKTFRLKLENLQTVKDQAHKLREN 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++A K+QM++L++ I   + +I   E +L +LR++Q QI      RSTL  QQ
Sbjct: 228  IAQDQEKSDASKSQMEQLKEKICGTEREILQMETSLDELRRLQGQIDIKATERSTLLTQQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             ++ AAL+EE EDTDEEL  W+  FE  +A  E+ ISKL R+ +D  +    L +     
Sbjct: 288  HEKLAALSEENEDTDEELMEWQTKFEERIALLETKISKLVRDMDDEASYSSVLSKQNSEL 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AH++  +ERDS I+ +  +HNLG +P  PF+N+ A+N  NRI++RLS 
Sbjct: 348  THEIGKLQAEADAHLTMKHERDSDIKNICTKHNLGPVPEHPFTNDVAMNLTNRIKARLSS 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL DKKKS+E  L + W  YL  N R+  ++ Q Q+K+E  +GIL+  K+KE ERD+
Sbjct: 408  LENDLLDKKKSNEDQLDVLWKHYLKINARYSEVDGQIQSKIESMSGILRRRKDKEKERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E+++S  NLS IDERE  M+IEVERKT  L ER+++  I QK++E+++++QKIK L RE
Sbjct: 468  AEVELSKFNLSRIDERERHMQIEVERKTLALGERDYDSIISQKRTEVYSLEQKIKVLLRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD++  ++++RVKL LKK  LE+ K K  +I++E+KDKI+ VL+GR P ++D+KKEI QA
Sbjct: 528  KDIINRNADERVKLGLKKDALESSKDKLNEIVNEHKDKIKKVLRGRNPFEKDMKKEINQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
               +  E+++L SKS+EA++E+     K+ +  + L+K R+D+D+K+RF++SKL+S+ Q 
Sbjct: 588  FWPVDKEYNELRSKSQEAEQELKFTHSKVTDAREQLTKLRRDMDAKRRFLDSKLQSILQI 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
              ++D + KVL  A  KRD QK   N A+GMR+M  PFE +AR +HVCPCCER F+ +EE
Sbjct: 648  SANVDMFPKVLQDAMNKRDEQKRLENFANGMREMLAPFEHLARKNHVCPCCERAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQR++ +S+AE  K L++ESSNA++ FQQLDKLR +Y+ YVKL +ETIP+AEKNL
Sbjct: 708  DEFVKKQRMQNSSTAERSKALAMESSNAEALFQQLDKLRTIYDAYVKLVEETIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
            ++   +  QK+QAFDD+LGVLA ++ D+++VE L+QP +T DR   EIQ   K+V+DLEY
Sbjct: 768  NQHLADESQKAQAFDDLLGVLAHVQMDRDAVEALLQPTDTIDRHVHEIQQLVKEVEDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDS G+GV+++EEIQLEL+    T+D L  E++ LRD+ R +  D+S+ Q+RWH  REE
Sbjct: 828  ALDSSGRGVKSLEEIQLELNFLQRTRDTLIVEVDDLRDQHRMLNEDMSSAQVRWHNAREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            KVKA++ L   +K+EEEL  L EEK QL +++KLL E+  PLSKEKE LL +YN LK KL
Sbjct: 888  KVKASSILERFQKSEEELVLLAEEKEQLIVEKKLLEESLDPLSKEKESLLQEYNALKQKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            + EY + AE+K  FQQE++ L +++ KIK Y D +K+E+ KELQ +     S+++SC  +
Sbjct: 948  DEEYHQLAERKREFQQELDALGRLSMKIKGYLDSKKNEKLKELQGRHVLCHSQLQSCMAK 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
               I  EL++ K++++ Q Q++RNI+DNL YR+TKA V++   +IESLEER+L IG +S 
Sbjct: 1008 QQRISAELNKSKELLQGQGQLKRNIDDNLKYRKTKADVEQLTRDIESLEERLLSIGSLSA 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RL SE NR QGT+SVYQ+NIS++K +LK +QYKDI+KR+ +Q +QLK
Sbjct: 1068 IEADLKRHSQEKERLNSEFNRWQGTLSVYQSNISKHKQELKLSQYKDIEKRYTNQFLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFH+MKMEEINKII+ELWQQTYRGQDIDYI I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYTALDKALMRFHSMKMEEINKIIKELWQQTYRGQDIDYISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            DGPNAESLAAAL RIME RKGQENFQLIVITHDERFA LIGQRQ AEKYYRV+KD++QHS
Sbjct: 1248 DGPNAESLAAALLRIMEARKGQENFQLIVITHDERFAHLIGQRQLAEKYYRVSKDENQHS 1307

Query: 1201 IIEAQEIFD 1209
            IIE+QEIFD
Sbjct: 1308 IIESQEIFD 1316


>gi|413922539|gb|AFW62471.1| hypothetical protein ZEAMMB73_226461 [Zea mays]
          Length = 1304

 Score = 1417 bits (3668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/1196 (60%), Positives = 935/1196 (78%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQDE+NWPL
Sbjct: 108  MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQ QEIKT++LKLENLQT+KD A+KLRE+
Sbjct: 168  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQMQEIKTFRLKLENLQTVKDQAHKLREN 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I+QDQEK++A K+QM++L++ I   + +I   E +L +LR++Q QI      RSTL  QQ
Sbjct: 228  IAQDQEKSDASKSQMEQLKEKICGTEREILQMETSLDELRRLQGQIDIKATERSTLLTQQ 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             ++ AAL+EE EDTDEEL  W+  FE  +A  E+ ISKL R+ +D  +    L +     
Sbjct: 288  HEKLAALSEENEDTDEELMEWQTKFEERIALLETKISKLVRDMDDEASYSSVLSKQNSEL 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            T EI  L +EA AH++  +ERDS I+ +  +HNLG +P  PF+N+ A+N  NRI++RLS 
Sbjct: 348  THEIGKLQAEADAHLTMKHERDSDIKNICTKHNLGPVPEHPFTNDVAMNLTNRIKARLSS 407

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            LE DL DKKKS+E  L + W  YL  N R+  ++ Q Q+K+E  +GIL+  K+KE ERD+
Sbjct: 408  LENDLLDKKKSNEDQLDVLWKHYLKINARYSEVDGQIQSKIESMSGILRRRKDKEKERDA 467

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
             E+++S  NLS IDERE  M+IEVERKT  L ER+++  I QK++E+++++QKIK L RE
Sbjct: 468  AEVELSKFNLSRIDERERHMQIEVERKTLALGERDYDSIISQKRTEVYSLEQKIKVLLRE 527

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
            KD++  ++++RVKL LKK  LE+ K K  +I++E+KDKI+ VL+GR P ++D+KKEI QA
Sbjct: 528  KDIINRNADERVKLGLKKDALESSKDKLNEIVNEHKDKIKKVLRGRNPFEKDMKKEINQA 587

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQ 540
               +  E+++L SKS+EA++E+     K+ +  + L+K R+D+D+K+RF++SKL+S+ Q 
Sbjct: 588  FWPVDKEYNELRSKSQEAEQELKFTHSKVTDAREQLTKLRRDMDAKRRFLDSKLQSILQI 647

Query: 541  IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
              ++D + KVL  A  KRD QK   N A+GMR+M  PFE +AR +HVCPCCER F+ +EE
Sbjct: 648  SANVDMFPKVLQDAMNKRDEQKRLENFANGMREMLAPFEHLARKNHVCPCCERAFTPDEE 707

Query: 601  DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNL 660
            DEFVKKQR++ +S+AE  K L++ESSNA++ FQQLDKLR +Y+ YVKL +ETIP+AEKNL
Sbjct: 708  DEFVKKQRMQNSSTAERSKALAMESSNAEALFQQLDKLRTIYDAYVKLVEETIPLAEKNL 767

Query: 661  HELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY 720
            ++   +  QK+QAFDD+LGVLA ++ D+++VE L+QP +T DR   EIQ   K+V+DLEY
Sbjct: 768  NQHLADESQKAQAFDDLLGVLAHVQMDRDAVEALLQPTDTIDRHVHEIQQLVKEVEDLEY 827

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
             LDS G+GV+++EEIQLEL+    T+D L  E++ LRD+ R +  D+S+ Q+RWH  REE
Sbjct: 828  ALDSSGRGVKSLEEIQLELNFLQRTRDTLIVEVDDLRDQHRMLNEDMSSAQVRWHNAREE 887

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            KVKA++ L   +K+EEEL  L EEK QL +++KLL E+  PLSKEKE LL +YN LK KL
Sbjct: 888  KVKASSILERFQKSEEELVLLAEEKEQLIVEKKLLEESLDPLSKEKESLLQEYNALKQKL 947

Query: 841  NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
            + EY + AE+K  FQQE++ L +++ KIK Y D +K+E+ KELQ +     S+++SC  +
Sbjct: 948  DEEYHQLAERKREFQQELDALGRLSMKIKGYLDSKKNEKLKELQGRHVLCHSQLQSCMAK 1007

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
               I  EL++ K++++ Q Q++RNI+DNL YR+TKA V++   +IESLEER+L IG +S 
Sbjct: 1008 QQRISAELNKSKELLQGQGQLKRNIDDNLKYRKTKADVEQLTRDIESLEERLLSIGSLSA 1067

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
             E +L +H  E++RL SE NR QGT+SVYQ+NIS++K +LK +QYKDI+KR+ +Q +QLK
Sbjct: 1068 IEADLKRHSQEKERLNSEFNRWQGTLSVYQSNISKHKQELKLSQYKDIEKRYTNQFLQLK 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TTEMANKDLDRYY ALDKALMRFH+MKMEEINKII+ELWQQTYRGQDIDYI I+SDSEGA
Sbjct: 1128 TTEMANKDLDRYYTALDKALMRFHSMKMEEINKIIKELWQQTYRGQDIDYISINSDSEGA 1187

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            GTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1188 GTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1247

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            DGPNAESLAAAL RIME RKGQENFQLIVITHDERFA LIGQRQ AEKYYRV+KD+
Sbjct: 1248 DGPNAESLAAALLRIMEARKGQENFQLIVITHDERFAHLIGQRQLAEKYYRVSKDE 1303


>gi|347954550|gb|AEP33775.1| Rad50 [Physcomitrella patens]
 gi|347954556|gb|AEP33778.1| Rad50 [Physcomitrella patens]
          Length = 1314

 Score = 1028 bits (2659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1218 (47%), Positives = 817/1218 (67%), Gaps = 20/1218 (1%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESV+QT++ H GEKV LSY+CAD+DRE+PALMGVSKAILENVIFVHQDEANWPL
Sbjct: 108  MEYKAIESVIQTLD-HNGEKVALSYKCADIDREIPALMGVSKAILENVIFVHQDEANWPL 166

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +P+ LKKKFDDIFSATRYTKALEV+KKLHK+QAQ IK YKLKL+NL+ LKDAA+K  E+
Sbjct: 167  AEPAILKKKFDDIFSATRYTKALEVLKKLHKEQAQGIKVYKLKLDNLRNLKDAAHKFHEN 226

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            + QDQ K   L++Q++ELEK+I D   KI+  E  LKD  K++++I+   + R  L +Q+
Sbjct: 227  VEQDQGKANFLRHQIRELEKTITDSRRKINVMEEGLKDYSKLKEEINVKESVRKMLKKQK 286

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI-KFLEQNIDA 239
             +Q  AL EEIEDTDE+L  W+ +F   +AK   ++   ER   D +  + K  +Q+   
Sbjct: 287  DEQQQALHEEIEDTDEDLLTWQKDFNENLAKLRQNLMGSERNLKDAEVDLRKISDQHTRN 346

Query: 240  YTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLS 299
            Y+ +   L +E   +     E ++ I+K+FA HNLG++     + E     + R+  R  
Sbjct: 347  YSLQ-GKLQAEVEGNEKVNMELEAEIRKVFAEHNLGNVGTRSLNYEEYRRLVQRVFQRFE 405

Query: 300  DLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERD 359
            DL RD    K+++       W +   +++ +   + +  AK + KA     I   + +  
Sbjct: 406  DLNRDYSQLKETNRAETAKLWRAVQQSSEEYLGAKNKVTAKQDKKAATEAAIANLDEDIA 465

Query: 360  SFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
            S    IS+  L  +D  E K   EV+  T++  +  +E  I   + E+  +D K+K L R
Sbjct: 466  SGSYAISDNELRRLDAAEKKADAEVKILTSREDDVRYEEVIDDGKREIHELDTKLKILRR 525

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            EKD +A +S D   L L+K ELE+ +   +K++D+ K+ I+  LK RLP  +DLK+EI  
Sbjct: 526  EKDAVACESADLAALRLRKEELEDKELALQKLLDDNKEAIKKALK-RLPETKDLKREIET 584

Query: 480  ALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQ 539
            ALR       +   K   A+KEV  +  +I E + +L+K+++D DSK++ +  +LES+  
Sbjct: 585  ALRVRKENAAETGQKCALAEKEVVKVDSRIHETSLSLAKYQRDRDSKRKMLLGRLESILN 644

Query: 540  QIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEE 599
                I  +Q  L  A + ++  KS +++  GM++MFDPFE+ AR  H CPCCER F+ EE
Sbjct: 645  LTVEITDFQVQLHEAVKAKENIKSTHDLCTGMKKMFDPFEKQARNTHACPCCERGFTPEE 704

Query: 600  EDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKN 659
            EDEFV+KQR+ A+S  + ++  + ++  A+   QQLDKLR ++++Y KLS E IP AEKN
Sbjct: 705  EDEFVRKQRINASSYTDKLRESAAKAQEAEVKVQQLDKLRAIHDDYQKLSNELIPAAEKN 764

Query: 660  LHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLE 719
            L  L +E  + + A +D+LG+LA  +A+ + VE L  P +    L+++++  +KQV D E
Sbjct: 765  LDALRQEKARLTDAHEDMLGLLAHAEAEVDMVEKLRVPADRMTELYKDVENMKKQVADQE 824

Query: 720  YMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLRE 779
            Y LD+R Q  RT+ +I  E+      +D++   +EK+R+E  ++++DL     + H  RE
Sbjct: 825  YKLDTRSQDTRTLADIAAEIRAVEEKRDDIYRRVEKMREEHAFLKDDLLTWVNKLHMARE 884

Query: 780  EKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVK 839
            EK KAA+ + ++ + ++E E L +E  Q+DLD ++  +A     ++KE+   ++ D K  
Sbjct: 885  EKAKAASKITEIDRKKKEKEKLADEIVQIDLDVEIYKQAVSSAQQKKERAEKEHTDFKNT 944

Query: 840  LNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEK-------KSQSE 891
               E EE   Q+IN F QE++ L  +   ++++   RK+E    L E+       KS+ E
Sbjct: 945  KAME-EEVCLQEINKFNQEVDKLRNLLDILQKFSLSRKEEELGRLNEQIRRQEAEKSEKE 1003

Query: 892  SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER 951
            + VKS +   DE+     +   +V NQ +++R I+DNL YR+     ++   +IE LE++
Sbjct: 1004 NVVKSLR---DEVA----KLASVVGNQTELKRKIDDNLQYRKYCRDEEEMIQKIEELEKQ 1056

Query: 952  VLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKR 1011
            +   G + T E +L + + +  +LLSE+NR QGT++VY++N+++NK +L Q+QYKDIDKR
Sbjct: 1057 LADKGDLQTLEADLKRAMNDLQKLLSELNRSQGTIAVYESNVAKNKAELSQSQYKDIDKR 1116

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
            +  QLIQLKTTEMANKDLD+YY+ALDKAL+RFH+MKMEEINKI++ELWQQTYRGQDID+I
Sbjct: 1117 YSTQLIQLKTTEMANKDLDKYYHALDKALLRFHSMKMEEINKIVKELWQQTYRGQDIDFI 1176

Query: 1072 RIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGIL 1131
             I SD+EG GTRSYSY+V+M++GDAEL+MRGRCSAGQKVLASLIIRLALAETFCLNCGIL
Sbjct: 1177 EIRSDAEGMGTRSYSYRVVMRSGDAELDMRGRCSAGQKVLASLIIRLALAETFCLNCGIL 1236

Query: 1132 ALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYR 1191
            ALDEPTTNLD PNAESLA AL RIMEDR+GQENFQLIVITHDERFAQLIGQRQHAE+YYR
Sbjct: 1237 ALDEPTTNLDTPNAESLATALLRIMEDRRGQENFQLIVITHDERFAQLIGQRQHAERYYR 1296

Query: 1192 VAKDDHQHSIIEAQEIFD 1209
            ++KDDHQHSIIE+Q+IFD
Sbjct: 1297 ISKDDHQHSIIESQDIFD 1314


>gi|302822980|ref|XP_002993145.1| ATP-binding cassette transporter, subfamily I, member 3, SmABCI3
            [Selaginella moellendorffii]
 gi|300139036|gb|EFJ05785.1| ATP-binding cassette transporter, subfamily I, member 3, SmABCI3
            [Selaginella moellendorffii]
          Length = 1248

 Score =  994 bits (2571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1222 (47%), Positives = 793/1222 (64%), Gaps = 26/1222 (2%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            MEYKAIESVLQTIN HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL
Sbjct: 38   MEYKAIESVLQTINTHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 97

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             + S LKKKFDDIFSATRYTKAL+VIKKLHKDQ QEIK  KLKLEN+QTLKDAAYKL+E+
Sbjct: 98   SEASVLKKKFDDIFSATRYTKALDVIKKLHKDQTQEIKMQKLKLENVQTLKDAAYKLQET 157

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            I  DQ+KT+ L++ +  L   IQ    KI+  E  L+++R++Q +I+     R+++ + +
Sbjct: 158  IDGDQQKTKQLQDLIAILTPKIQAAQAKINSLEGVLEEIRQLQKEINFKDGVRTSVLKAK 217

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             +QY AL EE ED+DE+L  W+  F   +A+   +I  L+R  +  +T+   L + I   
Sbjct: 218  TEQYNALEEENEDSDEDLAEWQEKFHERIAQSNKEICDLQRSLDAANTQYDTLSELIAQA 277

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
            + ++     E  AH+    + D+ IQ+LF R+ LG+L   P   +A    I RI +RL D
Sbjct: 278  STQVGKFEGEENAHLQDKKQCDALIQQLFDRYKLGNLV-LPLDEQATERSIARITNRLED 336

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKE-KENERD 359
            L++D     K  E  L        D N ++ +   +K  K+  K  I K I E +   RD
Sbjct: 337  LKQDHAKLTKFHEKELATFSKKLDDVNQKYSDASGRKDGKIGQKRSIEKRIDELRTTFRD 396

Query: 360  SFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
            +  L+     L    ER   M  EV+R   ++ +  F+  I +++     ++QKI++L  
Sbjct: 397  TSTLEGE---LRRSAERAASMDTEVKRMQRKMDDMNFDELISEERKNKLGIEQKIRSLRL 453

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            EK  L  D++DR  L LK  +L + ++  KK++++ KDK R  LK +    + +K ++  
Sbjct: 454  EKANLDRDADDRRSLKLKADDLASQQRNLKKLMEDNKDKFRLTLKTQPKDPKTVKSDVEL 513

Query: 480  ALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQ 539
                +   +D+L  +SR+AD  V   +  + +    L+K +++ ++K++ + S+L SL Q
Sbjct: 514  TFGNISKAYDELLDRSRDADMRVAQARAMLDDAKSTLAKQQEEKEAKRKLLISRLYSLFQ 573

Query: 540  QIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF-SAE 598
            Q  +  +Y   L    + RD  K  +++ADGMR+MFDPFER+ARA H CPCCERPF + E
Sbjct: 574  QDLNPSSYPSKLRELSDARDSSKRSHDMADGMRRMFDPFERIARATHACPCCERPFATPE 633

Query: 599  EEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEK 658
            EEDEFV KQRVK +S+A+ +  L+  +S AD+ FQQLDKLR ++EEY KL  + I   EK
Sbjct: 634  EEDEFVDKQRVKRSSTAQRLHELASLTSIADNKFQQLDKLRPLFEEYQKLESQGISATEK 693

Query: 659  NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDL 718
            ++ ++T EL++ ++  +DV  +LAQ KA+   V  L    ++ +  +  +Q  +++V  L
Sbjct: 694  SISDMTMELERSTETQNDVSCLLAQSKAELGLVTELRITAQSIEEAYTSVQNLEREVRTL 753

Query: 719  EYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLR 778
            +  L+     +R+ +++  EL       + L  +L++L++E  YM++DL+N + R H   
Sbjct: 754  QNQLNPES-SLRSPDDVGEELEKHEKQLEELNRKLDRLKEEHDYMKDDLANCKQRKHAEE 812

Query: 779  EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKV 838
             +K      L   K  +EE   L+++  Q+D + +   E   PL++EKE+ L +++ LK 
Sbjct: 813  MKKADLEKKLERNKALKEEEASLVKQMNQIDTEIQFEMEQLEPLAEEKERHLKEFDQLKR 872

Query: 839  KLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFK------------ELQEK 886
            K  +E +   +   +F +E+  L  I  KIKEY      ER K            ELQ +
Sbjct: 873  KFRQEQDVSTQGVNDFDKEVHSLTNIWGKIKEYACSSYVERHKTHNVQTAKRRLSELQAQ 932

Query: 887  KSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIE 946
            K + ES+   C       L E+ R  +++  Q  I RNI DN+ YR+  A+  K   EI+
Sbjct: 933  KDEEESKKSFC-------LAEVQRVNNVLAQQKVIERNIADNIKYRKLCAEEQKCIQEIK 985

Query: 947  SLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYK 1006
            +LEER+L IG    FE EL K L E+  L+ E +R +GT++V+++NI+RNK DLKQ QYK
Sbjct: 986  ALEERMLAIGNTLDFEGELKKALKEKQHLMGEESRHKGTIAVHESNIARNKADLKQPQYK 1045

Query: 1007 DIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQ 1066
            +IDKR+  QLIQLKT EMANKDLD+YYNALD+ALMRFHTMKMEEINKII+ELWQQTYRGQ
Sbjct: 1046 NIDKRYRAQLIQLKTMEMANKDLDKYYNALDRALMRFHTMKMEEINKIIKELWQQTYRGQ 1105

Query: 1067 DIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1126
            DID+I I +D+EG GTRSYSY+V+M+ G AELEMRGRCSAGQKVLA+LIIRLALAETFCL
Sbjct: 1106 DIDFIEIRADAEGTGTRSYSYRVVMRAGGAELEMRGRCSAGQKVLAALIIRLALAETFCL 1165

Query: 1127 NCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHA 1186
            NCGIL LDEPTTNLD  NAES AAAL RIME+R+GQENFQLIVITHDERFAQLIGQRQ  
Sbjct: 1166 NCGILTLDEPTTNLDAQNAESFAAALLRIMEERRGQENFQLIVITHDERFAQLIGQRQLT 1225

Query: 1187 EKYYRVAKDDHQHSIIEAQEIF 1208
            EKYYRV+KD+ QHS+IE QEIF
Sbjct: 1226 EKYYRVSKDERQHSLIEVQEIF 1247


>gi|357462801|ref|XP_003601682.1| DNA repair protein Rad50 [Medicago truncatula]
 gi|355490730|gb|AES71933.1| DNA repair protein Rad50 [Medicago truncatula]
          Length = 1524

 Score =  973 bits (2515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/686 (73%), Positives = 575/686 (83%)

Query: 524  DSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVAR 583
            + +K+FIESKL+SL+QQ   ID+Y KVL+SAKEKRDVQKSKYNIADGMRQMFDPFERVAR
Sbjct: 839  EPRKKFIESKLQSLDQQGSGIDSYLKVLESAKEKRDVQKSKYNIADGMRQMFDPFERVAR 898

Query: 584  AHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
            AHH CPCCER FSAEEED FVKKQR KAASSAEH+K+L++ESS+ADS +QQL+KLR+ YE
Sbjct: 899  AHHFCPCCERSFSAEEEDSFVKKQRGKAASSAEHLKILAVESSSADSDYQQLEKLRIWYE 958

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADR 703
            EYVKLSKETIP AEK L ++ EELD KSQA DDVLG+LAQ+K DKE VE +V+ VE ADR
Sbjct: 959  EYVKLSKETIPNAEKELQQVKEELDHKSQALDDVLGILAQVKTDKELVEPVVKYVEHADR 1018

Query: 704  LFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYM 763
            +F EIQ  QK+V+DLE  L   G  VRT+EEIQLEL     TKDNL  EL  L DEQR M
Sbjct: 1019 IFLEIQTLQKKVEDLESELGCGGPEVRTLEEIQLELVALQGTKDNLHTELTNLMDEQRNM 1078

Query: 764  ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLS 823
            + D+S IQ R    R +K+ AA  L+DVK+ EEELE L EE  Q+DLDEK L EA GPLS
Sbjct: 1079 DTDISGIQSRLQNARADKMNAAMKLQDVKRLEEELERLTEEMTQVDLDEKSLTEAFGPLS 1138

Query: 824  KEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKEL 883
            K K+K+ +DYN+LK++L+ E+E   E+K  +QQE E +  + SKIKEY + +K +R KEL
Sbjct: 1139 KRKDKIRADYNELKLRLDHEFENLVEKKRIYQQEAEAVFGMTSKIKEYSNSKKGDRLKEL 1198

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFAS 943
            QEKKS  ES+++SC+ R  EI+ ELD+ KD++RN D +RR IEDNLNYR+TKA+VD+   
Sbjct: 1199 QEKKSLLESQLQSCETRMQEIIDELDKRKDLLRNTDLLRRKIEDNLNYRKTKAEVDELEH 1258

Query: 944  EIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQA 1003
            EIE LEE +LKIG   T +TE  K   +R RLLSE NRC+GT+ VYQ+NIS+NKIDLKQA
Sbjct: 1259 EIEILEENMLKIGVSDTIQTEHQKLSQDRQRLLSESNRCKGTIDVYQSNISKNKIDLKQA 1318

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
            QYKDIDKR+FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY
Sbjct: 1319 QYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1378

Query: 1064 RGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAET 1123
            RGQDID I IHSDSEG GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAET
Sbjct: 1379 RGQDIDCISIHSDSEGGGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAET 1438

Query: 1124 FCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR 1183
            FCLNCGILALDEPTTNLDGPNAESLAAA+ RIMEDRK QENFQLIVITHDERFAQLIGQR
Sbjct: 1439 FCLNCGILALDEPTTNLDGPNAESLAAAILRIMEDRKSQENFQLIVITHDERFAQLIGQR 1498

Query: 1184 QHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            QHAE+YYRVAKDDHQHSIIE+QEIFD
Sbjct: 1499 QHAERYYRVAKDDHQHSIIESQEIFD 1524



 Score =  629 bits (1623), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 337/523 (64%), Positives = 418/523 (79%), Gaps = 7/523 (1%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           MEYKAIESVLQTINPH+GEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDEANWPL
Sbjct: 134 MEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPL 193

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAY LRE+
Sbjct: 194 QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYTLREN 253

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           I+ DQEK E+LK+Q+Q+L+ SI+D+D KI H + TLK L +++ QIS+ T  RSTLF  Q
Sbjct: 254 ITHDQEKAESLKDQIQQLDGSIKDLDAKIDHVDKTLKHLLELKGQISSKTTERSTLFRSQ 313

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
           QKQY+ L EE E+ DEEL   K  F+  +A  ++ ISKL+REK+D++TK   L++ ID  
Sbjct: 314 QKQYSDLEEEFEEPDEELMESKTKFDEKIANSQTQISKLDREKSDINTKFPVLKKTIDNS 373

Query: 241 TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
             EI+ L +E  AHMS  +ERDS I+ +F R+NLGSLP  PFS E ALN  NR++SRL D
Sbjct: 374 IWEISKLQTE--AHMSLRSERDSCIKNIFDRYNLGSLPKPPFSAEDALNLTNRVKSRLGD 431

Query: 301 LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
           LE+DLEDKK ++   LKMAWD YL+AN+ W+N EA+ Q K E KAGI+K I+EK+NE +S
Sbjct: 432 LEKDLEDKKNANNTELKMAWDCYLNANESWQNTEAKIQTKREHKAGIIKRIEEKKNELES 491

Query: 361 FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
           FEL+ISN+++SH+DERE +++I +E K  Q  EREFE+   + +++   ++QKI+ALNRE
Sbjct: 492 FELEISNIDVSHLDERERELQIRLEGKIKQRDEREFELKKSEIENKALNVEQKIRALNRE 551

Query: 421 KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
              +A DS++R KL+L K +LE  KK   +     KDKIR VLKGR+P D+DLKKEITQA
Sbjct: 552 MLTMATDSKEREKLSLMKGDLETKKKIDDQ-----KDKIRRVLKGRIPSDKDLKKEITQA 606

Query: 481 LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDV 523
           LR ++ EFDDL++K READKEVN+LQMK+QE  +NLSKH+KD+
Sbjct: 607 LRTVVAEFDDLNAKYREADKEVNVLQMKVQEADNNLSKHQKDM 649


>gi|242065154|ref|XP_002453866.1| hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor]
 gi|241933697|gb|EES06842.1| hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor]
          Length = 737

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/737 (63%), Positives = 596/737 (80%)

Query: 473  LKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIES 532
            +KKEI QA   +  E++DL SKS+EA++E+ + Q K+ +  + L+K R+D+D+K+RF++S
Sbjct: 1    MKKEINQAFWPVDKEYNDLKSKSQEAEQELKLTQSKVTDAREQLTKLRRDMDAKRRFLDS 60

Query: 533  KLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCE 592
            KL+S+ Q   ++D + KVL  A  KRD QK   N A+GMR+M  PFE +AR +HVCPCCE
Sbjct: 61   KLQSILQISANVDMFPKVLQDAMNKRDEQKRLENFANGMREMLAPFEHLARKNHVCPCCE 120

Query: 593  RPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKET 652
            R F+ +EEDEFVKKQR++ +S+AE  K L+LESSNA++ FQQLDKLR +Y+ Y+KL +ET
Sbjct: 121  RAFTPDEEDEFVKKQRMQNSSTAEKSKALALESSNAEALFQQLDKLRTIYDAYMKLLEET 180

Query: 653  IPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQ 712
            IP+AEKNL++   +  QK+Q FDD+LGVLAQ+K D+++VEVL+QP +T DR  +EIQ  +
Sbjct: 181  IPLAEKNLNQHLADESQKAQTFDDLLGVLAQVKMDRDAVEVLLQPTDTIDRHVREIQQLR 240

Query: 713  KQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
            K+V++LEY LDS GQGV+++EEIQLEL+    T+D L  E++ LRD+ R +  DLS+ Q+
Sbjct: 241  KEVEELEYTLDSSGQGVKSLEEIQLELNSLQRTRDTLSIEVDDLRDQHRMLNEDLSSAQV 300

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
            RWHT REEKVKA+  L   +K EEEL  L EEK QL +++KLL E+  PLSKEKE LL +
Sbjct: 301  RWHTAREEKVKASKILERFQKFEEELVLLAEEKEQLIIEKKLLEESLDPLSKEKENLLQE 360

Query: 833  YNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSES 892
            YN  K + + EY + AE+K +FQQE++ L ++  KIK Y D RK ER KELQ K +   S
Sbjct: 361  YNASKQRFDEEYHQLAERKRDFQQELDALGRLNMKIKGYLDSRKIERLKELQGKLALCYS 420

Query: 893  EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV 952
            ++++C+ +  +I  EL++ K+++++Q Q++R+I+DNLNYR+TKA+V++   +IESLEERV
Sbjct: 421  QLQNCEAKHKDISAELNKSKELLQSQGQLKRDIDDNLNYRKTKAEVEQLTRDIESLEERV 480

Query: 953  LKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRH 1012
            L IG  S  E +L +H  E++RL SE NRCQGT+SVYQ+NIS++K +LKQ QYKDI+KR+
Sbjct: 481  LSIGSSSAIEADLKRHSQEKERLNSEFNRCQGTLSVYQSNISKHKQELKQTQYKDIEKRY 540

Query: 1013 FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIR 1072
             +QL+QLKTTEMANKDLDRYY ALDKALMRFH+MKMEEINKII+ELWQQTYRGQDIDYI 
Sbjct: 541  TNQLLQLKTTEMANKDLDRYYTALDKALMRFHSMKMEEINKIIKELWQQTYRGQDIDYIS 600

Query: 1073 IHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA 1132
            I+SDSEGAGTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA
Sbjct: 601  INSDSEGAGTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA 660

Query: 1133 LDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRV 1192
            LDEPTTNLDGPNAESLAAAL RIME RKGQENFQLIVITHDERFA LIGQRQ AEKYYRV
Sbjct: 661  LDEPTTNLDGPNAESLAAALLRIMEARKGQENFQLIVITHDERFAHLIGQRQLAEKYYRV 720

Query: 1193 AKDDHQHSIIEAQEIFD 1209
            +KD++QHSIIE+QEIFD
Sbjct: 721  SKDENQHSIIESQEIFD 737


>gi|222622903|gb|EEE57035.1| hypothetical protein OsJ_06817 [Oryza sativa Japonica Group]
          Length = 1614

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/750 (60%), Positives = 574/750 (76%), Gaps = 16/750 (2%)

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
            +P  R +   ++  L  L  + +D  S+ R+ D         +   T  LS   K V +K
Sbjct: 874  VPAVRWVNWTVSFWLAWLPPQLEDELSRRRDGD---------VMGRTQPLSLLDKVVGAK 924

Query: 527  KRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHH 586
            + ++ESKL+S+ +    I+ + K L  A ++R+ QK+  + A GMRQM++PFE +AR  H
Sbjct: 925  RSYVESKLQSITKMSADINMFPKHLKDAMDEREKQKNNLSYAKGMRQMYEPFENLARELH 984

Query: 587  VCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYV 646
            +CPCC+R F+ +EEDEFVKKQR    S+A+ M  +SLE SNA+ +FQQL+KL   YEE+V
Sbjct: 985  MCPCCQRAFTPDEEDEFVKKQRTTCESTADRMNKISLECSNAEDFFQQLNKLNATYEEFV 1044

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            KL KE IP+AEKNL +L  +  +K+Q FDD + VLAQ+K DK++V+VL+QPVET DR  Q
Sbjct: 1045 KLGKEAIPLAEKNLKQLLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVETIDRHVQ 1104

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EIQ    QV++LEY LD RGQGV+++E+IQLEL+    T+D L NE++ LRD+QR + + 
Sbjct: 1105 EIQQLGPQVENLEYKLDVRGQGVKSLEQIQLELNSVQRTRDTLNNEVDDLRDQQRTLTDG 1164

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            L+N Q+RWH +REEK+KA+  +   +KAEE+L HL EEK +L L+EK L E+ GPLSKE+
Sbjct: 1165 LTNAQMRWHDIREEKLKASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGPLSKER 1224

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEK 886
            E LL ++  LK KL++EY + AE+K  FQQEI+ L     +IK Y + +K E+  ELQEK
Sbjct: 1225 ESLLQEHEALKEKLDQEYHQLAERKREFQQEIDALETHNERIKGYLNSKKGEKLNELQEK 1284

Query: 887  KSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIE 946
             +Q +S+++  K R +E   EL + K+++++QDQ++RNI+DNLNYR TK +V++   EIE
Sbjct: 1285 HTQLQSDLQKSKERKEEKSAELSKNKELLKSQDQLKRNIDDNLNYRRTKDEVERLTHEIE 1344

Query: 947  SLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYK 1006
             LE+++L IG +ST E +L +H  E+DRLLSE NRCQGT SVYQ+NIS++K++LKQ QYK
Sbjct: 1345 LLEDKILSIGSLSTIEADLKQHSQEKDRLLSEYNRCQGTQSVYQSNISKHKLELKQTQYK 1404

Query: 1007 DIDKRHFDQLIQLK-------TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
            DI+KR+F+QL+QLK       TTEMANKDLDRYY ALDKALMRFHTMKMEEINKII+ELW
Sbjct: 1405 DIEKRYFNQLLQLKVDGMNVQTTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELW 1464

Query: 1060 QQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1119
            QQTYRGQDIDYI I+SDSEGAGTRSYSY+V+MQTGDAELEMRGRCSAGQKVLASLIIRLA
Sbjct: 1465 QQTYRGQDIDYISINSDSEGAGTRSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLA 1524

Query: 1120 LAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQL 1179
            LAETFCLNCGILALDEPTTNLDGPNAESLA AL RIME RKGQENFQLIVITHDERFAQL
Sbjct: 1525 LAETFCLNCGILALDEPTTNLDGPNAESLAGALLRIMESRKGQENFQLIVITHDERFAQL 1584

Query: 1180 IGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            IGQRQ AEKYYRV+KD+HQHS IEAQEIFD
Sbjct: 1585 IGQRQLAEKYYRVSKDEHQHSKIEAQEIFD 1614



 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 305/526 (57%), Positives = 408/526 (77%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           ME+KAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108 MEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT++LKLENLQTLKD AY+LR++
Sbjct: 168 QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDN 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           I+QDQEK++ALK QM+EL  ++Q ++DKI  TE +L DLR++Q +I++ T+ R+T F  Q
Sbjct: 228 IAQDQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQQEINSSTSARTTYFTLQ 287

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
           Q+QYAAL+EE EDTD+ELK W+  FE  +A  ++ ISKLER+ +D +T   FL + I+  
Sbjct: 288 QQQYAALSEENEDTDDELKEWQTKFEERMALLQNKISKLERDVDDENTTSSFLSKAINDL 347

Query: 241 TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
             E   L +EA AHMS  +ERDS I+K+F +HNLG +P+AP ++ AA++  N  +++LS+
Sbjct: 348 MRETGRLQAEADAHMSVKHERDSAIRKIFTKHNLGPIPDAPLTDAAAMHLTNITKAKLSN 407

Query: 301 LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
           L  DL+DKKKS+E   +  W  YL+ N R+  +  Q ++K+  K GI + +K+KE+ERD+
Sbjct: 408 LNDDLQDKKKSNEAQKQFLWGRYLEVNTRYSEVVGQIESKVASKKGISRRMKDKESERDA 467

Query: 361 FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
            E+ +S  NL  IDE+E  ++IEVERK   L ER ++  + QK++E+F++DQKIK L  E
Sbjct: 468 AEMDLSKYNLPRIDEKERHLQIEVERKALALGERNYDSIVNQKRTEIFSLDQKIKTLQWE 527

Query: 421 KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
           KD +  DS DRV L +KK ELE  KKK KKI DE+KDKIR V KGR P ++++KKE++QA
Sbjct: 528 KDSIISDSNDRVLLDVKKDELEESKKKLKKIFDEHKDKIRIVFKGRTPSEKEVKKELSQA 587

Query: 481 LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
             ++  E++DL+SKS+EA +E+ ++QMKI +   +LSK +K++D +
Sbjct: 588 FGSVDREYNDLNSKSQEAAQELKLVQMKILDARSHLSKLQKELDGQ 633


>gi|302762188|ref|XP_002964516.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4
            [Selaginella moellendorffii]
 gi|300168245|gb|EFJ34849.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4
            [Selaginella moellendorffii]
          Length = 1160

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/729 (48%), Positives = 485/729 (66%), Gaps = 34/729 (4%)

Query: 488  FDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTY 547
            +D+L  +SR+AD  V   +  + +    L+K +++ ++K++ + S+L SL QQ  +  +Y
Sbjct: 457  YDELLDRSRDADMRVAQARAMLDDAKSTLAKQQEEKEAKRKLLISRLYSLFQQDLNPSSY 516

Query: 548  QKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF-SAEEEDEFVKK 606
               L    + RD  KS++++ADGMR+MFDPFER+ARA H CPCCERPF + EEEDEFV K
Sbjct: 517  PSKLRELSDARDSSKSQHDMADGMRRMFDPFERIARATHACPCCERPFATPEEEDEFVDK 576

Query: 607  QRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEE 666
            QRVK +S+A+ +  L+  +S AD+ FQQLDKLR ++EEY KL  + I   EK++ ++T E
Sbjct: 577  QRVKRSSTAQRLHELASLTSIADNKFQQLDKLRPLFEEYQKLESQGISATEKSISDMTME 636

Query: 667  LDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG 726
            L++ ++  +DV  +LAQ KA+   V  L    ++ +  +  +Q  +++V  LE  L+   
Sbjct: 637  LERSTETQNDVSCLLAQSKAELGLVTELRITAQSIEEAYTSVQNLEREVRTLENQLNPES 696

Query: 727  QGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN 786
              +R+ +++  EL       + L  +L++L++E  YM++DL+N + R H    +K     
Sbjct: 697  -SLRSPDDVGEELEKHEKQLEELNRKLDRLKEEHDYMKDDLANCKQRKHAEEMKKADLEK 755

Query: 787  TLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEE 846
             L   K  +EE   L+++  Q+D + +   E   PL++EKE+ L +++ LK K  +E + 
Sbjct: 756  KLERNKALKEEEASLVKQMNQIDTEIQFEMEQLEPLAEEKERHLKEFDQLKRKFRQEQDV 815

Query: 847  QAEQKINFQQEIEMLLKIASKIKEYYDLRKDE-------RFKELQEKKSQSESEVKSCKI 899
              +   +F +E+  L  I  KIK+Y +  K         R  ELQ +K + ES+   C  
Sbjct: 816  STQGVNDFDKEVHSLTNIWGKIKDYVERHKTHNVQTAKRRLSELQAQKDEEESKKSFC-- 873

Query: 900  RTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVS 959
                 L E+ R  +++  Q  I RNI DN+ Y                  +R+L IG   
Sbjct: 874  -----LAEVQRVNNVLAQQKVIERNIADNIKY------------------QRMLAIGNTL 910

Query: 960  TFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQL 1019
             FE EL K L E+  L+ E +  +GT++V+++NI+RNK DLKQ QYK+IDKR+  QLIQL
Sbjct: 911  DFEGELKKALKEKQHLMGEESHHKGTIAVHESNIARNKTDLKQPQYKNIDKRYRAQLIQL 970

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
            KT EMANKDLD+YYNALD+ALMRFHTMKMEEINKII+ELWQQTYRGQDID+I I +D+EG
Sbjct: 971  KTMEMANKDLDKYYNALDRALMRFHTMKMEEINKIIKELWQQTYRGQDIDFIEIRADAEG 1030

Query: 1080 AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             GTRSYSY+V+M+ G AELEMRGRCSAGQKVLA+LIIRLALAETFCLNCGIL LDEPTTN
Sbjct: 1031 TGTRSYSYRVVMRAGGAELEMRGRCSAGQKVLAALIIRLALAETFCLNCGILTLDEPTTN 1090

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  NAES AAAL RIME+R+GQENFQLIVITHDERFAQLIGQRQ  EKYYRV+KD+ QH
Sbjct: 1091 LDAQNAESFAAALLRIMEERRGQENFQLIVITHDERFAQLIGQRQLTEKYYRVSKDERQH 1150

Query: 1200 SIIEAQEIF 1208
            S+IE QEIF
Sbjct: 1151 SLIEVQEIF 1159



 Score =  305 bits (782), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 231/349 (66%), Gaps = 1/349 (0%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           MEYKAIESVLQTIN HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL
Sbjct: 108 MEYKAIESVLQTINTHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            + S LKKKFDDIFSATRYTKAL+VIKKLHKDQ QEIK  KLKLEN+QTLKDAAYKL+E+
Sbjct: 168 SEASVLKKKFDDIFSATRYTKALDVIKKLHKDQTQEIKMQKLKLENVQTLKDAAYKLQET 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           I  DQ+KT+ L++ +  L   IQ    KI+  E  L+++R++Q +I+     R+++ + +
Sbjct: 228 IDGDQQKTKQLQDLIAILTPKIQAAQAKINSLEGVLEEIRQLQKEINFKDGVRTSVLKAK 287

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            +QY AL EE ED+DE+L  W+  F   +A+   +I  L+R  +  +T+   L + I   
Sbjct: 288 TEQYNALEEENEDSDEDLAEWQEKFHERIAQSNKEICDLQRSLDAANTQYDTLSELIAQA 347

Query: 241 TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
           + ++     E  AH+    + D+ IQ+LF R+ LG+L   P   +A    I RI +RL D
Sbjct: 348 STQVGKFEGEENAHLQDKKQCDALIQQLFDRYKLGNLV-LPLDEQATERSIARITNRLED 406

Query: 301 LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILK 349
           L++D     +  E  L        D N ++ +   +K  K+  K+ I K
Sbjct: 407 LKQDHAKLTRFHEKELATFSKKLDDVNQKYSDASGRKDGKIGQKSNISK 455


>gi|62320304|dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis thaliana]
          Length = 554

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/447 (69%), Positives = 365/447 (81%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKAILENVIFVHQDE+NWPL
Sbjct: 108 MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKT+KLKLENLQTLKDAAYKLRES
Sbjct: 168 QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRES 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           I+QDQE+TE+ K QM ELE S+Q +D ++H+ E+ LKDLRK+QDQ+S  TA RSTLF++Q
Sbjct: 228 IAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLKDLRKLQDQVSIKTAERSTLFKEQ 287

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
           Q+QYAAL EE EDT EELK WK+ FE  +A   + I K+ERE  D +T I  L      Y
Sbjct: 288 QRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNY 347

Query: 241 TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
             EI+ L +EA AHM   NERDSTIQ +F  +NLG++P+ PFS E  LN  NRI+SRL +
Sbjct: 348 MLEISKLQTEAEAHMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEVVLNLTNRIKSRLGE 407

Query: 301 LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
           LE DL DKKKS+E AL  AWD Y+DANDRWK+IEAQK+AK EIK GI K I+EKE ERDS
Sbjct: 408 LEMDLLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDS 467

Query: 361 FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
           FE +IS +++   DERE ++++E+ERKT Q +ER FE  I QKQ E+++++ KIK LNRE
Sbjct: 468 FEFEISTVDVKQTDEREKQVQVELERKTKQNSERGFESKIEQKQHEIYSLEHKIKTLNRE 527

Query: 421 KDVLAGDSEDRVKLALKKAELENHKKK 447
           +DV+AGD+EDRVKL+LKK E EN KKK
Sbjct: 528 RDVMAGDAEDRVKLSLKKTEQENLKKK 554


>gi|145341341|ref|XP_001415771.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575994|gb|ABO94063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1313

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 403/1241 (32%), Positives = 665/1241 (53%), Gaps = 68/1241 (5%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +E K ++SV+Q+++   G+ V +S +C D++ EVPALMGVSKAILENV+FVHQ+E+NWPL
Sbjct: 109  LEKKDLDSVIQSVD-DGGKMVSISRKCVDINAEVPALMGVSKAILENVVFVHQEESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             D + LKKKFD+IFSAT+YTKALE I+KL  +Q   I+ +K K+E+L+  KD A KLR +
Sbjct: 168  GDSAGLKKKFDEIFSATKYTKALEHIRKLKTEQTGLIREFKGKVESLKIQKDHAMKLRAT 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
               +++K + L + +  LE  IQ   ++I   E     +R++ ++ + + ARR  +  + 
Sbjct: 228  FETNRDKADDLTDHISSLEAKIQAAQEEIAQIEAVFSSVRQIHEKRNALIARREAVTSEN 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVA--KRESDISKLEREKNDMDTKIKFLEQNID 238
             ++ A++  E+ ++ EEL+   + F    A  K+E D+  L+R+ ND+  +++ L+++ +
Sbjct: 288  ARKLASMNTELTESLEELEKMGDTFNQKFATMKQERDV--LDRKLNDVRLEMEALKEHRE 345

Query: 239  AYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLP--NAPFSNEAALNFI-NRIR 295
                    L +EA AH  R+ ER      +FA+      P      S E A N + N + 
Sbjct: 346  RMIKTAGRLGAEAEAHTKRIAERS-----VFAQSIAKKYPEIGVEISPEIAPNALSNALD 400

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDA--------NDRWKNI---EAQKQAKMEIK 344
            SRLS  ++ + DK +S    L  A  + +D           R + I   +A ++A++E+ 
Sbjct: 401  SRLSMRQQAI-DKMRSKHRDLDTACGAKIDEITERLSSHTQRIQIINEQQAARKARLEV- 458

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQ 404
              I K + E            + +N S I+E EN+    V+R     A +       Q +
Sbjct: 459  --INKELGE------------NAVNESAIEELENR----VKRANEAYASKSKSDFATQLK 500

Query: 405  SELFAMDQKIKALNRE---------KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEY 455
             ++   DQK+  L RE           V AG+SE +V++  KK E        + I+D  
Sbjct: 501  VDMEQADQKLGELEREMTKLRSEQESAVQAGESEMKVRM--KKEEYSTKNNTLETIVDSR 558

Query: 456  KDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDN 515
             +++R++    +P++ +LK  + + L  L  E  +  ++       V +L+ +++     
Sbjct: 559  AEQLREIFGAAMPMNIELKDAVIEKLNELSEETANAQTECNTNTSNVAVLEHELEAARAA 618

Query: 516  LSKHRKDVDSKKRF--IESKLESLNQQIFSIDTYQKVLDSA-KEKRDVQKSKYNIADGMR 572
            L   R++++  K    IE+ +  L    F+   Y++ LD+  +E  DV+++   +   ++
Sbjct: 619  LQSDRRELEEIKSTEKIEANVRLLGAGGFA--GYREALDAVNREVTDVEENLTTLTA-LQ 675

Query: 573  QMFDPFERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSY 631
             +F  F   A  +  C  C+R F S    D F++  +   A++   +  L          
Sbjct: 676  TLFSKFVAEAEKNQTCSLCKRGFPSFNAADTFIQDMQTNIANAPAQIASLEERVQKTRER 735

Query: 632  FQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESV 691
             + L  L      +  +S E IP +E+++  L + L        +    LA  +  +ES 
Sbjct: 736  RELLQALSETASRFKAVS-EKIPNSERDVSNLEDSLADAQAKKKNAEENLADRQRAREST 794

Query: 692  EVLVQPVETADRLFQEIQLWQKQVDDLEY-MLDSRGQGVRTMEEIQLELSGSLSTKDNLQ 750
              L++      RL +E+   Q  +D LE   L+S G+  R+  +I  E+      ++   
Sbjct: 795  ASLLEDAGNISRLAKEVDALQSTIDSLESRYLESNGE-TRSALDISNEIEMLDVKREAAD 853

Query: 751  NELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDL 810
             E   L   +   E +L N++     +REE + A +      + + E+  + +   +   
Sbjct: 854  REKAILVKRKERHETELLNLERNARDMREELLVAQSRGEKRTQLKAEMADISKATAESAA 913

Query: 811  DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIK 869
            ++K + E   P   EKEKL S+    + K + + ++  E +I   Q+ ++ +  ++  I+
Sbjct: 914  EQKRMEEERAPGLAEKEKLSSERESQR-KTHAQEQDALENEIRELQRVVDTITSMSKTIE 972

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
                    ER  E      ++  +++  + +      +L   ++++  Q+ ++R +EDN+
Sbjct: 973  AADAAGTSERLVEHNRSLEETNGKIEELEAKLQTRGKQLKAKEEVIARQNDLKRELEDNI 1032

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
             +   K + +    EI+ L   +  +G +   E +L +    ++   +E    QG +  +
Sbjct: 1033 AFLRGKREEETILKEIDQLTAEMHNMGQMPDVEKKLRQVTNVKNDFRTEAAEAQGRVKAH 1092

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            +  +      LK A+Y +I+KR   QL++LKT EM + DLDRY+ ALDKALM FH  KME
Sbjct: 1093 REAMKAAGDQLKGAEYNNIEKRLSKQLVELKTVEMVSDDLDRYHKALDKALMSFHATKME 1152

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            EINK++RELWQ+TYRGQDID I+I SDS+G  G  SY+Y+V+M  G AELEMRGRCSAGQ
Sbjct: 1153 EINKVVRELWQRTYRGQDIDSIQIRSDSDGTTGRSSYNYRVVMLCGGAELEMRGRCSAGQ 1212

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLA LIIRLALAETFCLNCGILALDEPTTNLD PN+++LA +L  IM+ R+ QENFQLI
Sbjct: 1213 KVLACLIIRLALAETFCLNCGILALDEPTTNLDAPNSDALARSLIEIMKSRRDQENFQLI 1272

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            VITHD  FA ++GQR+  + Y+R+ KDD+QHS IE ++I+D
Sbjct: 1273 VITHDMEFAHVLGQRELTDYYWRITKDDNQHSHIEREDIYD 1313


>gi|308798817|ref|XP_003074188.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri]
 gi|116000360|emb|CAL50040.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri]
          Length = 1313

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 409/1269 (32%), Positives = 686/1269 (54%), Gaps = 124/1269 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +E K ++SV+Q+++ + G+ V +S +C D++ EVPALMGVSKAILENV+FVHQ+E+NWPL
Sbjct: 109  LEKKDLDSVIQSVDAN-GKMVSISKKCVDINAEVPALMGVSKAILENVVFVHQEESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             D + LKKKFD+IFSAT+YTKALE I+KL  +QA  I+ YK K+E+L+  KD A KLR++
Sbjct: 168  GDSAGLKKKFDEIFSATKYTKALEHIRKLKTEQAGLIRDYKGKVESLKIQKDHATKLRDT 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
               +++K+  L   +  LE  I    ++I   E     +R++ D+ + + ARR  +  + 
Sbjct: 228  FETNRDKSSDLTKHVAMLEVKINAAQEEIAQIEAVFAAVREIHDKRNALVARREAVTLEN 287

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVA--KRESDISKLEREKNDMDTKIKFLEQNID 238
             ++ A++  E+ ++ EEL+   + F    A  K+E D+  L+R+ ND   +++ L+ + +
Sbjct: 288  ARKLASMNTELTESLEELEAMGDTFNQKFAALKQERDV--LDRKVNDARLEMEALKDHRE 345

Query: 239  AYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI---NRIR 295
                    L +E  A   R++ER +  Q    RH     P   F+  + ++ +   + + 
Sbjct: 346  RMIKTAGRLSAEVEAQTKRVSERLTFAQSTAKRH-----PELGFAATSEVDPVVLSDALS 400

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKE 355
            SRLS + +   DK ++   ++     + +D  D  + + +  Q    I  G  +  + + 
Sbjct: 401  SRLS-MRQQAIDKMRAKHRSMDAECGAKID--DITERLSSHTQRIAII--GEQQDTRRRR 455

Query: 356  NERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAER-------EFEINIRQKQSELF 408
             E  + +L  + +N S I+E EN+    V R     A +       + ++++ + +  L 
Sbjct: 456  LEEINKDLGENAVNESAIEELENR----VNRANEAYASKSKSDFASQMKVDMEKVEINLS 511

Query: 409  AMDQKIKALNREKD--VLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
             ++++I  L  E++  V AG+SE  +K+ +KK EL   K   + I++   +++RDV    
Sbjct: 512  DIEREINKLRAEQENAVQAGESE--MKIRMKKEELFAKKNSLENIVEHRSEQLRDVFGAA 569

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
            +P++ ++K        AL+ + D+L+    +A +++N    ++  +   ++  + +++S 
Sbjct: 570  MPMNIEMKD-------ALVEKLDELNELVAKAQEQLNASSSRVAVLEHEIAVAKTELESN 622

Query: 527  KRFIES--KLESL--NQQIFSIDT---YQKVLDSA-KEKRDVQKSKYNIADGMRQMFDPF 578
            +R +     LE++  N Q+        Y   L++  +E  DV+     +   ++ +F  F
Sbjct: 623  RRSLNDVIALETIDANAQVLGAGGFAGYANALEAVNREVGDVEAQLTQLT-SLQNLFSKF 681

Query: 579  ERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
               A  +  C  C+R F SAE  D F++  +   A     + V+           + L  
Sbjct: 682  VAEAEKNQSCSLCKRGFPSAESTDSFIQDMQQNMAKVPAQIAVIEERVEKTRERRKLLLD 741

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHEL---------TEELDQKSQAFDDVLGVLAQIKADK 688
            L     ++  LS E +P +E+   EL         TE+L +K            +I   +
Sbjct: 742  LSEAASQFKTLS-EKVPDSERLFAELEVSFATARETEKLCEK------------EIAEKR 788

Query: 689  ESVEVLVQPVETA---DRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLST 745
            +S  V+   +E A    RL +E+Q  Q  V+ L+  +              + ++G   +
Sbjct: 789  QSASVVGSIMEDAGNISRLAKEVQALQDAVEALQLNV--------------VNVTGETRS 834

Query: 746  KDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEK--VKAANTLRDVKKAEEEL---EH 800
              ++ N+LE L D +R   +    I ++    R+E+  ++  N  R+ +   EEL   + 
Sbjct: 835  TLDISNDLEML-DVKREAADRERGILLK----RKERHEMELLNLERNARDLREELLLTKS 889

Query: 801  LMEEKGQLDLDEKLLAEASGPLSKEKEKL-------LSDYNDLKVKLNREYE----EQAE 849
              E++ QL  +   ++EA    + EK+++       L++   L V+  R+ E    EQ+E
Sbjct: 890  RGEKRTQLKAEMAKISEAIAMGASEKQRMEEELAPGLAEKERLAVERERQREMHGQEQSE 949

Query: 850  QKINFQQEIEMLLKIASKIKEYYDL--------RKDERFKELQEKKSQSESEVKSCKIRT 901
             +I+ + E++ L+ + + + +  D         R  E  K L+E   + E      + R 
Sbjct: 950  LEIDIR-ELQRLVDVTAGMNKAIDQADAAGISDRLAEHTKSLEETNGKIEDLGTKLQARA 1008

Query: 902  DEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTF 961
             ++  +    ++++  Q+ ++R +EDN+ +   K + +    +IE L E++  +G ++  
Sbjct: 1009 KQLKAK----EEVIARQNDLKRELEDNIAFLRGKREEETILKDIEELVEQMHNMGQMADV 1064

Query: 962  ETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            E +L      ++ L +E    QG +  +Q  +      L  A Y +IDKR   QL++LKT
Sbjct: 1065 EKKLRLAQGSKNDLRTEAAEAQGRVKAHQEAMKSASDQLNGAAYVNIDKRLSKQLVELKT 1124

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA- 1080
             EM + DLDRY+ ALDKALM FH  KMEEINK++RELWQ+TYRGQDID I+I SDSE   
Sbjct: 1125 VEMVSDDLDRYHKALDKALMSFHASKMEEINKVVRELWQRTYRGQDIDSIQIRSDSETTT 1184

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            G  SY+Y+V+M  G AELEMRGRCSAGQKVLA LIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1185 GRSSYNYRVVMLCGGAELEMRGRCSAGQKVLACLIIRLALAETFCLNCGILALDEPTTNL 1244

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            D PN+++LA +L  IM+ R+ QENFQLIVITHD  FA ++GQR+  + Y+R+ KDD+QHS
Sbjct: 1245 DAPNSDALARSLIEIMKSRRDQENFQLIVITHDMEFAHVLGQRELTDYYWRITKDDNQHS 1304

Query: 1201 IIEAQEIFD 1209
             IE ++I+D
Sbjct: 1305 HIEKEDIYD 1313


>gi|412993707|emb|CCO14218.1| DNA repair protein Rad50 [Bathycoccus prasinos]
          Length = 1365

 Score =  501 bits (1290), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 405/1293 (31%), Positives = 686/1293 (53%), Gaps = 120/1293 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +E K ++ ++Q ++ +TGEKV L+ +CAD++ EVP LMGVSKAILENV+FVHQ+E+NWPL
Sbjct: 109  LEKKDLDQIIQMVDENTGEKVSLTKKCADINAEVPILMGVSKAILENVVFVHQEESNWPL 168

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             + + LKKKFDDIFSAT+YTKALE I+KL  +Q  EIK  + K E L+  KD A KL  +
Sbjct: 169  GEGAVLKKKFDDIFSATKYTKALEHIRKLRVEQVGEIKDARGKCETLRVRKDHAVKLTAT 228

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
               +++K  AL+ Q+  ++++I+     +      L   R++ ++  ++ ++ S +  + 
Sbjct: 229  RDDNEQKARALEAQIASVDENIEKAMKSVEDMTGALAGARRLAEEKLSVESKLSAVKAEN 288

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            +++   +     ++ EEL+  +  F    A  + ++++L  E  D+  +   L+   D+ 
Sbjct: 289  ERKVERVDNVYTESLEELEGLREQFTAKFATMKEELAQLHSEVKDLHMQSDALKDKKDSE 348

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHN--LG-SLPNAPFS-------------- 283
              ++  L +EA  H+ R+ +R    +++ AR N  +G ++ NA  +              
Sbjct: 349  FQKVGRLQAEAEQHVKRLEKRVEHAKEV-ARENAEIGQAICNAILNMSDDGEDEEDDDEE 407

Query: 284  ---------NEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIE 334
                     NE+A N  N  R   S+ E  ++  +K+    L++  D+  +A ++ +N  
Sbjct: 408  DDEMVDATQNESARN--NTQRPSKSERESTMKLFRKALGERLQVLQDAAKNAREKRQNAH 465

Query: 335  AQKQAK-----MEIKAGILKHIKEKENERDSFELQISNLN--------LSHIDERE---- 377
            A+  +      M+ K G  K I++K+  R+     I  +         +  IDE +    
Sbjct: 466  AEATSAIVNVDMKKKRGEEK-IRDKQKLREELRANIDAITKDLTQSATVVAIDEYKKNEQ 524

Query: 378  ------NKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDR 431
                  NK   EVE   +  AE      + + ++E+ ++D++++AL  E++  A   E +
Sbjct: 525  EAKEIFNKRSKEVELAGDGKAE------MTEIENEIESIDKQLQALRSEQEEAARAGETQ 578

Query: 432  VKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR--LPLDRDLKKEITQALR-----AL 484
            VK+ LK+ E+   ++    I++  KD++    +G   +P    L +E+ +  +     A 
Sbjct: 579  VKIRLKRDEIAAKQEALTSILNSRKDRLEAAFRGAQGVPEPLLLSEEVKRIEKERREAAT 638

Query: 485  LTEFDDLSSKS-READK-EVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIF 542
            L E +  SSK+ RE+ + EV+  +  +    D+     +        +    + L   + 
Sbjct: 639  LAERELASSKTMRESRRREVDAAETTLNSWKDDARVCEEQASDAPTVVLLGDKGL---LG 695

Query: 543  SIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF-SAEEED 601
              D   KV +  KE    QK+   +  G   + D  ++ A A+  CP C R F + +E  
Sbjct: 696  VEDAMHKVNEDIKE---AQKTMEYMRAGNVLLTDYLQK-AVANTACPMCTRGFPNIKEMS 751

Query: 602  EFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLH 661
             F K+ R    ++ + +++   + +  ++  ++L  L  +   Y +L ++ IP AE    
Sbjct: 752  AFEKRLRTIIDAAPDQLEINEKKITECEAKREKLLGLTSIAARYKELKEKRIPAAEDEYK 811

Query: 662  ELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY- 720
            +  + LD+           L + K  +++V  +V+   T  R  QE+   + Q+  +   
Sbjct: 812  KAQDTLDEACNTELRFQRALEEAKKARDTVVAVVEDAATISRHAQELNTLETQLRMMPGG 871

Query: 721  MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREE 780
            M   R   +R++  I  +L    + ++N +N+L+ LR ++   +N+L+ +   W      
Sbjct: 872  MTSGREAEIRSITAIAGDLDVEQANRENKENQLKVLRRKKERTDNELAQLDRNWRD---- 927

Query: 781  KVKAANTLRDVKKAEEELEHLMEEKGQLDLDE-------KLLAEASGPLSKEKEKLLSDY 833
               A + L D ++ + +   L EEK +L+ D+       + L     PL  EK+KL  + 
Sbjct: 928  ---AKDALADAERNQLKTISLREEKKKLERDQDQATRDIETLERELPPLEDEKKKLERER 984

Query: 834  NDLKVKLNREYEEQAEQKI-NFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSES 892
             + +VK+ ++ E+  + K    Q+ I+    +   I++Y +    +  +E+Q+       
Sbjct: 985  EE-RVKIEKDNEDAVDDKTRTLQKSIDFFDSLNDPIQKYIESNARQTLREIQKS------ 1037

Query: 893  EVKSCKIRTDEILVEL----DRFKD---IVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
              +S  ++ D  L +L      +K     V  Q +I+R +EDN+  +  K +  +    I
Sbjct: 1038 -FESADVKIDATLKKLATKQKEYKSKEKSVNKQSEIQRTLEDNIALQRGKKEEKELEMRI 1096

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLS--EVNRCQ--GTMSVYQTNISRNKIDLK 1001
            + L+E   K G V     +LG+ L  R+++ +  EV + +  G +  ++     ++ +L 
Sbjct: 1097 KELQETASKFGNVK----DLGEELKRREKVHNQLEVTKAEAAGQVKTHREMARSSEKELN 1152

Query: 1002 QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQ 1061
             A+YK+ID R   + I+ +T EM N DL+RYY ALDKALM FH+ KM +INK+++ELWQ+
Sbjct: 1153 SAEYKNIDSRLSKETIRFQTLEMVNSDLNRYYTALDKALMAFHSSKMGDINKVVKELWQR 1212

Query: 1062 TYRGQDIDYIRIHSDSE-----GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLII 1116
            TYRGQDIDYI+I SD+E       G  SY+Y+V+M    AEL+MRGRCSAGQKVLA LII
Sbjct: 1213 TYRGQDIDYIQIRSDAEKQEGKTGGKSSYNYRVVMICNGAELDMRGRCSAGQKVLACLII 1272

Query: 1117 RLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERF 1176
            RLALAETFCLNCGILALDEPTTNLD PNAESLA +L  IM  R+ QENFQLIVITHD  F
Sbjct: 1273 RLALAETFCLNCGILALDEPTTNLDTPNAESLARSLIDIMHSRREQENFQLIVITHDVEF 1332

Query: 1177 AQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            A ++GQRQ A+ Y+RV KD++QHS +E ++I++
Sbjct: 1333 AHMLGQRQQADYYWRVTKDENQHSCVEREDIYE 1365


>gi|302851368|ref|XP_002957208.1| hypothetical protein VOLCADRAFT_119635 [Volvox carteri f.
            nagariensis]
 gi|300257458|gb|EFJ41706.1| hypothetical protein VOLCADRAFT_119635 [Volvox carteri f.
            nagariensis]
          Length = 1167

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 368/1216 (30%), Positives = 599/1216 (49%), Gaps = 98/1216 (8%)

Query: 43   AILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKL 102
            A+LENVIFVHQ+E+NWPL +   LK+KFDDIF+AT+YTKALE ++KL  ++AQ +K Y+L
Sbjct: 1    AVLENVIFVHQEESNWPLAEGKVLKEKFDDIFAATKYTKALEALRKLRTEKAQSLKEYRL 60

Query: 103  KLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDID-------DKIHHTELT 155
             +E L+ +KD A        + + +    + QM   E  I+D++        K+   +  
Sbjct: 61   SMETLKQVKDMATHHMGQREEAKSRVADCQAQMASFETKIRDLEQQRSALASKLGEIDSL 120

Query: 156  LKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESD 215
             +D+   + Q+  +   R+T  E++ +      E+ E++ EEL+    + + + A ++  
Sbjct: 121  ARDMSSRRGQLEQL---RATNREREDRFRNEGREDFEESSEELQAHLVDSDRVAAGKQQR 177

Query: 216  ISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLG 275
             + LERE     ++ + +             L  EA  H S + ERD  I+       L 
Sbjct: 178  CTALEREVEAARSRKEAMAAQHQRDCLRHGQLAGEAANHASNVAERDRAIRATAVALAL- 236

Query: 276  SLP-------NAPFSNEAALNFINRIRSRLSDLE---RDLEDKKKSDELALKMAWDSYLD 325
             LP       +  FS+ AA  F   + +R+ +LE   R L    +++E  L  A D+   
Sbjct: 237  PLPMQGEQTADGSFSSAAAEGFCREVATRVQELEGRVRALRADARTNEGRLSSAVDAATA 296

Query: 326  ANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVE 385
               R +     K+ ++E          +  N   +   QI     + +  R   +R + E
Sbjct: 297  QLARAQEGLRLKRVQLE----------DNRNAISNCGAQIQGSQFTEVSAR--ALREDAE 344

Query: 386  RKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSE-------DRVKLALKK 438
            R       ++ E +      ++ A  Q+++A  R    L  + +          +L LK+
Sbjct: 345  RAEELYRRKQMEESSSDAARQVEAARQEVEAATRRMSELRAERQRAAAAAEGSARLRLKR 404

Query: 439  AELENHKKKHKKIIDEYKDKIRDVLK---GR-LPLDRDLKKEITQALRALLTEFDDLSSK 494
             +LE+ +++  K++   +  +   L    G  LP    L+      L  L  E  D    
Sbjct: 405  TDLESKEEQLSKVVAARRLDLTKALALPAGEALPAPGALRARAEGVLGRLRGEEADHLRA 464

Query: 495  SREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQI-FSIDTYQKVLDS 553
            S+EA +     +  +      +S+ + D++  +  +   + +   ++  S + Y   + +
Sbjct: 465  SQEAHRAAETAKSALTARRGEVSRCQADMERLRGELRHGMAAAVGEVGVSEEEYNNKIVT 524

Query: 554  AKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS 613
             ++  D ++++      M  +F  +         CP C R FS  E       +RV    
Sbjct: 525  MQQVEDRRRNRLGKCSAMETLFKEYRETVNNGGDCPLCCRGFSEPE-------RRVCLRH 577

Query: 614  SAEHMKVLSLESSNADSYF------QQLDKLRMVYEEYVK---LSKETIPVAEKNLHELT 664
              E MK+L    S  D  F      +QL+ LR +   +V+   L  +   + +       
Sbjct: 578  IDEEMKILP--KSIEDCQFALQQLQRQLEALRALQPAWVRYNDLRAKLPQLQQAEQQLQE 635

Query: 665  EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDS 724
            +  +   +A    +      +  KE   +  + V   DRL  E ++ +K++  L+    +
Sbjct: 636  QVEELSEKAMAAQMDYAEVHERVKELTRINSEVVWHVDRLAGEAEVLRKEIAVLDPAAAT 695

Query: 725  RGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEK-VK 783
               G    E               +  ELE +   ++  E        R +  R+E+ ++
Sbjct: 696  APAGCSVSE---------------IDTELEAVEAARQRAELARDGAMARVNRYRDERALE 740

Query: 784  AANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEAS--GPLSKEKEKLLSDYNDLKVKLN 841
            AA  +  V + + +++ L  E     L+++L A A   GPL  E++ LL   ++ + +  
Sbjct: 741  AAAAVNRVNELQSKIQEL--EAANTVLEQELRAAAGNLGPLETERDSLLRQRDEARQRAQ 798

Query: 842  REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT 901
            RE  E  EQ    Q  +  LL  A  + EY       R  EL    ++  SE+++ + R 
Sbjct: 799  REVTEAEEQLRGAQLHLSQLLDKARVVSEY---EARGRGAEL----ARMGSELEAAQGRI 851

Query: 902  DE---ILV----ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK 954
            +E   +L     EL   +  +     +RR++ D L+ R ++   +  A+E+ ++E RV +
Sbjct: 852  EEQGRVLAAKEEELTALRQELVADAALRRDVVDVLDMRSSRKAEEDLATELAAMEARVAQ 911

Query: 955  IGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFD 1014
            +G   +   +      +RD L S+ +  +G ++  Q   +R + +L   +Y+DI +R + 
Sbjct: 912  VGDPGSLHRQATSLAEQRDALRSQQDVLRGHIAAAQQAAARAQAELNDPKYRDIQQRFYS 971

Query: 1015 QLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIH 1074
            Q + +KTTEMA  DLD+YY AL+KAL+ FHT KM +INKII+ELWQ+TYRGQDIDYI+I 
Sbjct: 972  QQVTVKTTEMAMSDLDKYYKALEKALLVFHTTKMADINKIIKELWQKTYRGQDIDYIQIK 1031

Query: 1075 SDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1134
            +D+EGAG RSY+Y+V+M +G AELEMRGRCSAGQKVLA LIIRLALAETFCLNCGILALD
Sbjct: 1032 ADTEGAGARSYNYRVVMYSGSAELEMRGRCSAGQKVLACLIIRLALAETFCLNCGILALD 1091

Query: 1135 EPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            EPTTNLD  N+ SLA AL  +ME R GQENFQLIVITHDE FAQLIG R+H +  +RV K
Sbjct: 1092 EPTTNLDAENSASLARALKSLMESRSGQENFQLIVITHDENFAQLIGTREHVDTLWRVTK 1151

Query: 1195 DDH-QHSIIEAQEIFD 1209
            D   QH+++  + + D
Sbjct: 1152 DPATQHTLVTPEALRD 1167


>gi|147772258|emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]
          Length = 527

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/332 (71%), Positives = 274/332 (82%), Gaps = 3/332 (0%)

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ 736
            VLGVLAQ+K DK+SVE L+QPVETADRLFQEIQ WQKQVDDLEY LD RGQGVR+MEEIQ
Sbjct: 195  VLGVLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRSMEEIQ 254

Query: 737  LELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE 796
            LEL+   +TKDNL N+LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE
Sbjct: 255  LELNTLQNTKDNLHNDLEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE 314

Query: 797  ELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQ 856
            EL+ L+EEK Q+DL EK LAEA GPLSKEKEKLLSDYNDLK KL+ EYE+QAEQK N+QQ
Sbjct: 315  ELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQAEQKRNYQQ 374

Query: 857  EIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVR 916
            E+E LLK+ SKIKEYYD +K ER KEL+EK+S SES+++SC  R  EIL EL++ KD++R
Sbjct: 375  EVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTELNKSKDLMR 434

Query: 917  NQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLL 976
            NQDQ++RNIEDNLNYR+TKA+VDK   EIE LE+R+LKIGGVS  E +LGK   ER+RLL
Sbjct: 435  NQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSAVEVDLGKLSQERERLL 494

Query: 977  SEVNRC--QGTMSVY-QTNISRNKIDLKQAQY 1005
              V     + T   Y   +I RN +D +  QY
Sbjct: 495  FRVEILFEEHTEDWYLGDHIVRNDLDWRICQY 526


>gi|390603363|gb|EIN12755.1| hypothetical protein PUNSTDRAFT_97607 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1309

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 393/1275 (30%), Positives = 649/1275 (50%), Gaps = 145/1275 (11%)

Query: 1    MEYKAIESVLQTI--NPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            M  K +ES+L     NP  G++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ W
Sbjct: 107  MTMKTLESLLGLAEANPENGKRGVISTKCAEMDVEIPHLLGVSKAVLENVIFCHQEDSYW 166

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL + +TLKKKFDDIF ATRYTKAL+ IK L K++A E+KT K +LE+L   K  A KL+
Sbjct: 167  PLAEAATLKKKFDDIFEATRYTKALQAIKDLRKERAAELKTDKERLESLSREKGHADKLK 226

Query: 119  ESISQDQEKTEALKNQMQELEKSIQD------IDDKIHHTELTLKDLRKMQDQISTMTAR 172
              IS   + + A+  +  E E++  +      I+ K H      K+   M  +I     R
Sbjct: 227  GRIS---DLSAAIAGKEIEYEETQAEYERLVIINKKFHDQAHQFKE---MYMKIQGAQER 280

Query: 173  RSTLFEQQQKQYAALAE---EIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK 229
            R    E+     AA  E   EIE TD+EL++   NF   + ++++   + E ++ D+D +
Sbjct: 281  RKRYHEE----LAAAKENLQEIEGTDQELEDRLANFGTHIQQQKNKRRQEENKRQDVDEE 336

Query: 230  IKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN 289
            +  + +   A  +E+  L ++      R+ ERD  I+ + A++ +    ++P   +  L 
Sbjct: 337  VVAMRRKHVALISELGELRNQEKLQEDRIVERDQMIRDIAAKYGIKGYDHSPLERDKVLE 396

Query: 290  FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILK 349
            F+    SRL DL+R    + ++ +   ++  + Y   N R + +            G L+
Sbjct: 397  FL----SRLGDLQRRQNAETENVQNEARLKSEEY---NRRSRQMH-----------GALE 438

Query: 350  HIKEKENERDSFELQISNLNLS-HIDER--ENKMRIEVERKTNQLAEREFEINIRQKQSE 406
             +K ++N   +   QI+NL  S    ER  E    +  E KT        E +I +K++ 
Sbjct: 439  ALKAQKN---TIRTQITNLQASVAAAERTVEESHDLSTELKT-------LEADIEEKKAR 488

Query: 407  LFAMDQKIKA-----------------------LNREKDVLAGDSEDRVKLALKKAELEN 443
            +  ++ +IKA                       LN E   L+  ++ R +L LK++E + 
Sbjct: 489  IAKIEAEIKAANYDRKLADHAAKARQTEDLREQLNAEMTSLSRQADTRARLDLKRSEFKT 548

Query: 444  HKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN 503
               + K  +     K R ++ G+  L   +++++         E  +L ++S+ A++ + 
Sbjct: 549  KSTEVKHSLSTSNPKFRKLV-GKDALADTMERDLDNVTLEKEREHTELEAESQAANRALQ 607

Query: 504  MLQMKIQEVTDNLSKHRKDV-DSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQK 562
              +  I  +   +   R +V D  KR  E+  +S +  I      Q + D++ E    Q+
Sbjct: 608  QAENLISNLKSQIKAKRDEVKDLNKRVREALRDSESDSI-----AQGIKDASDEITYRQE 662

Query: 563  SKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKV 620
            S  N +DG+ Q ++   +   A   C  C R  +  E   F K  + R+K+ SS E +  
Sbjct: 663  SIGN-SDGLGQAYENLLKTGLAKKTCTACNRGLNDSELKIFEKFLRDRIKS-SSPESIAT 720

Query: 621  LSLESSNADSYFQQLDKLRMVYEEYV---KLSKETIPVAEKNLHELTEELDQKSQAFDDV 677
            +  E +    +  +LD+LR      V   KL  E IP  E+ + E    L   S   +  
Sbjct: 721  VKTELA---EWQAELDRLRECLPLEVSRDKLKNEDIPALEQQIKEQENLLPALSNTAEQA 777

Query: 678  LGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQL 737
            L  L+  K +   + +L Q      R  +E +   ++V ++E  L   G   +T +++Q 
Sbjct: 778  LERLSAAKTELRELSLLKQQANMISRTQRECERLNREVAEIEKELSVTG-STKTADDVQA 836

Query: 738  ELSG-SLSTKDNL--QNELEKLRDEQ----RYMENDLSNIQIRWHTLREEKVKAANTLRD 790
            EL   +LS + N   Q  L   RD Q    R  E DL  ++ R   LR       N +  
Sbjct: 837  ELDELTLSMRSNAREQQMLATERDRQLNAERTHEKDLHEMEKREGGLR-------NQILQ 889

Query: 791  VKKAEEELEHLMEEKGQLDLDEKL----LAEASGPLSKEKEKLLSDYNDLKVKLNREYEE 846
            ++   + LE + +E   L L  K     +A+A  P+ +  ++      +L VK+      
Sbjct: 890  IESTNQRLEGMRKEIADLTLRSKSVDSEIADAKAPIDQLDQEFKEQQRELDVKI-----A 944

Query: 847  QAEQKINFQQEIEMLL----KIASKIKEYYDLRKDERFKELQEKKSQSESEV-----KSC 897
            QA+QK    QE+ +++    ++   I+ Y   +   R +E +E+    ESE+     +S 
Sbjct: 945  QAQQK---SQELNIIVDKLNRVGRDIERYVREKHSRRLQEAEEQIQSIESEISRLTQESE 1001

Query: 898  KIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIG 956
             IR  E + E+D  K++     +I  ++ +NL  R+    + +   EI+S + E   K  
Sbjct: 1002 NIR--EAIAEID--KEMNEGGARIA-SLRENLRVRKLARDIKETEQEIKSYDIESAAK-- 1054

Query: 957  GVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQ-----AQYKDIDKR 1011
                FE    ++  E+ R     N+   + +     +S +K  LK       +YKD++K+
Sbjct: 1055 AQRQFED---RYSTEKKRETDMQNKAGLSAAHIGGELSSSKAQLKTLERDLKEYKDVNKK 1111

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
            + +QLI++K ++MAN DL++Y  ALD A+M++H++KMEE+N I+R LW +TY+G DID I
Sbjct: 1112 YTEQLIKVKMSDMANSDLEKYAKALDNAIMKYHSLKMEEVNDIMRHLWNKTYQGTDIDGI 1171

Query: 1072 RIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGI 1130
            +I  D+EG  + RSY+Y+V+M     E++MRGRCSAGQK+LAS+IIRLAL+++F  NCGI
Sbjct: 1172 KIRYDAEGGASKRSYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGI 1231

Query: 1131 LALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYY 1190
            LALDEPT  LD  N ++LAA+L  I+ +RK Q NFQL++ITHDE F + +GQ +  E Y+
Sbjct: 1232 LALDEPTNALDTENIDALAASLVDIINERKTQSNFQLVIITHDENFLRKLGQSEVMEHYW 1291

Query: 1191 RVAKDDHQHSIIEAQ 1205
            RV++D  Q S+IE Q
Sbjct: 1292 RVSRDSRQKSVIERQ 1306


>gi|348557552|ref|XP_003464583.1| PREDICTED: DNA repair protein RAD50-like [Cavia porcellus]
          Length = 1315

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 364/1243 (29%), Positives = 648/1243 (52%), Gaps = 95/1243 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV +S +C ++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 113  EFKTLEGVI-TRTKH-GEKVSISSKCTEIDREMISALGVSKSVLNNVIFCHQEDSNWPLS 170

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 171  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 230

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  +Q  E  ++ +++++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 231  TSKEAQLISSKEIIQSYENELEPLENRLKEIEHNLSKIMRLDNEIKALESRK----KQME 286

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K    L +++E     TDE+L +  +N + IV ++E  +   +RE + ++ + + L Q  
Sbjct: 287  KDNCELEQKMEKVFQGTDEQLNDLYHNHQRIVREKERRLVDCQRELDKLNKESRLLNQEK 346

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L      PFS+    NF   ++ R
Sbjct: 347  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSDRQIKNFHKLVKER 406

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 407  ----------QEQEAETANQLMNDFVEKETLKQKQIDEIRDKKTGLGRIIELKSEIL--- 453

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE    + ++  L  S   +R  ++  E+ +   +L++ E   NI   ++E+ +  
Sbjct: 454  SKKQNELKHVKCELQQLEGS--SDRILELDQELTKAERELSKAEKNSNIEILKAEVISLQ 511

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 512  NEKVDLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHNDEL-TLLL 570

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +H+  + 
Sbjct: 571  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQHKNHIS 615

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPFERV 581
            ++ +  E +L S   ++F +   Q   +D  + K D++KS    A   G   ++  F  +
Sbjct: 616  NELKRKEEQLSSYEDKLFDVCGSQDFEMDLDRLKEDIEKSSKQRAMLAGATAVYSQF--I 673

Query: 582  ARAHH----VCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLD 636
             +  H     CP C+R F  E E  E +   + K   + + +K   LE    +    ++ 
Sbjct: 674  TQLTHEKQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELKKKEKRRDEML 733

Query: 637  KLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQ 696
             L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V + 
Sbjct: 734  GLVPMRKNIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 793

Query: 697  PVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQ 750
             V   +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + 
Sbjct: 794  DVTIMER-------FQMELKDVERKIAQQAAKLQGVDLNRTVQQVNQEKQEKQHKLDTVS 846

Query: 751  NELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDL 810
            +++E  R   +  +  + +++   + L+ EK++ A  L+  ++ EE+   L  E   L  
Sbjct: 847  SKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIATNLQRRQQLEEQTVELSTEVQSLHR 906

Query: 811  DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQ--AEQKIN-FQQEIEMLLKIASK 867
            +     E   PL    E+L  +  +L    N+++     A+ K+N  +++++ +      
Sbjct: 907  EINDAKEQIKPLETTLERLKQEKEEL---TNKKHTNNKIAQDKLNDLKEKVKNIHGYMKD 963

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            I+ Y    KDE  K+ + + +   +++  C  + ++I  E+   +  +  Q    R ++D
Sbjct: 964  IENYIQDGKDEYKKQKETELNTVTAQLSECDKQKEKISKEMGVMRQDIDTQKIQERWLQD 1023

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGG---VSTFETELGKHLLERDRLLSEVNRCQG 984
             L  R    K ++   E+E   ++ LK  G   V   + E  K  +  D +    +   G
Sbjct: 1024 TLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLKMNIDDIKRNRDLALG 1079

Query: 985  TMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFH 1044
                Y+  I R K +L++ Q++D +++H + +I ++TTE+ANKDLD YY  LD+A+M+FH
Sbjct: 1080 RQKGYEEEIIRFKKELREPQFRDAEEKHREMMIVMRTTELANKDLDLYYKTLDQAIMKFH 1139

Query: 1045 TMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELE 1099
            +MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+
Sbjct: 1140 SMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALD 1199

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R
Sbjct: 1200 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSR 1259

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              Q NFQL++ITHDE F +L+G+ ++ E++YR+ K+  Q S I
Sbjct: 1260 SQQRNFQLLIITHDEDFVELLGRSEYVEQFYRIKKNIDQCSEI 1302


>gi|363739211|ref|XP_414645.3| PREDICTED: DNA repair protein RAD50 [Gallus gallus]
          Length = 1312

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 365/1234 (29%), Positives = 635/1234 (51%), Gaps = 77/1234 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++   Q  ++K  + +L+ L+  K+ A ++++++
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRLKQGTKVKECQTELKYLKQNKEKAQEIQDNL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  A K  ++ +E  +  +   +   E  L ++  + + +  + +RR  + +  Q
Sbjct: 228  ANREAQLSASKENIKSIESQLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDNQ 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + +  + TDE+LK+  +N +  V ++E  +S  +RE +    + +          
Sbjct: 288  DLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELDRASKECQRFNSEKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS IQ L A+  L     APF++     F   ++      
Sbjct: 348  IERGRLQLQADRHQEHIKVRDSLIQALSAQLELDGFEQAPFNDRQIAVFHELLK------ 401

Query: 302  ERDLEDKKKSDELALK------MAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKE 355
            ER   D + +++L  +      M  +      DR   +E     K +I+   L  +K  +
Sbjct: 402  ERQKSDTEAANQLMREFTQKEAMKQEQIDKIRDRKTGLERSIDLKSDIQNKRLAELKNVK 461

Query: 356  NERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIK 415
             E    +L+ S+  ++ +D    KM  E+E+          E  ++  Q+E   +D+ ++
Sbjct: 462  YE--LCQLEGSSDRIAELDREIVKMEHELEKAERNSNVETLEQEVQTLQNEKINLDKVLR 519

Query: 416  ALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKK 475
             L++E + L   +    ++ + K +  + +++ +K+   + +++  +L G  P     KK
Sbjct: 520  RLDQEMEQLNLHTTTITQMEMLKKDKADKEEQIRKVKLRHSEEL-TLLLGYFP----NKK 574

Query: 476  EITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
            ++   L    TE ++  S+    +K++   + +   ++  L K            E +L 
Sbjct: 575  QLEDWLHGKSTEINETRSRHALLNKQLASAEQQKNYISAELRKK-----------EEQLS 623

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRD-VQKS--KYNIADGMRQMFDPF--ERVARAHHVCPC 590
            +   ++F +   Q    +  + +D ++KS  +  +  G   ++  F  +        CP 
Sbjct: 624  NYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPV 683

Query: 591  CERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS 649
            C+R F  E E  + +   + K   + + +K    E    +    ++  L+ + +  V+L 
Sbjct: 684  CQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKKREKKRDEMIGLKPIRQTVVELQ 743

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV----ETADRLF 705
            +  IP     L  +  +               A++K + E  E L+Q V    E A+   
Sbjct: 744  ERDIPDLRNRLQTVNRD--------------FARLKGEIEEQETLLQTVLSEKEGANACL 789

Query: 706  QEIQL---WQKQVDDLEYML---DSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKL 756
            Q+I L   +Q  + D+E  +   +++  GV   RT+ ++  E        D + +++E  
Sbjct: 790  QDITLMERYQTDIRDVERKIAQQEAKLLGVDLNRTVLQVSQEKQAKKHLWDTVTSKIELN 849

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLA 816
            +  ++  +N +  ++   + LR EK++ +++++  ++ EE+   L  E   L  + K   
Sbjct: 850  QKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTTEVQSLSREIKEEK 909

Query: 817  EASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRK 876
            E   PL    EKL  D  DL  K     +E  E+    +++++ + K   +I+ Y    K
Sbjct: 910  EQVFPLDATLEKLQQDKEDLINKRTASNKEIQEKMNAIKEKVKDINKYTKEIENYIQQGK 969

Query: 877  DERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKA 936
            +E  K+ + +  +  S++ +C+ + ++I  E++  +  +  Q    R +EDNL  RE   
Sbjct: 970  EEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQERWLEDNLTLRERNK 1029

Query: 937  KVDKFASEIESLEERVLKIG--GVSTFETELGKHLLERDRLLSEVNRCQ-GTMSVYQTNI 993
            ++      I+ L   V K+G   V   + E  KHL E+   L   +    G    ++  I
Sbjct: 1030 ELKGVEDNIKEL---VKKMGEMKVPQLKNE-QKHLEEKIEALKRNHHVALGRQRGFEEEI 1085

Query: 994  SRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINK 1053
             R K +L+++Q+KD +++H + +I ++TTE+ NKDLD YY ALDKA+M FH+MKM+EINK
Sbjct: 1086 VRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMKMQEINK 1145

Query: 1054 IIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            IIR+LW+ TYRGQDI+YI I SD     S     RSY+Y+V+M  GD  L+MRGRCSAGQ
Sbjct: 1146 IIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQ 1205

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+
Sbjct: 1206 KVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLL 1265

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            VITHDE F +L+G+ ++ E +YR+ K+  Q S I
Sbjct: 1266 VITHDEDFVELLGRSEYVETFYRIRKNIDQCSEI 1299


>gi|60392985|sp|P70388.1|RAD50_MOUSE RecName: Full=DNA repair protein RAD50; Short=mRad50
 gi|1575575|gb|AAC52894.1| RAD50 [Mus musculus]
          Length = 1312

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 360/1240 (29%), Positives = 641/1240 (51%), Gaps = 89/1240 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  +    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRMKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  ++ + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLASSQEIVRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L      PFS     NF   ++ R
Sbjct: 344  AELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKER 403

Query: 298  -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI---KAGI 347
                    S L  DL DK+     ALK      L   DR   +    + K EI   K   
Sbjct: 404  QEREAKTASQLLSDLTDKE-----ALKQRQLDEL--RDRKSGLGRTIELKTEILTKKQSE 456

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
            L+H++ +       +L+ S+  +  +D+   K   E+ +     +    +  +   Q+E 
Sbjct: 457  LRHVRSELQ-----QLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEVMSLQNEK 511

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
              +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  
Sbjct: 512  ADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYF 570

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVD 524
            P  + L+              D L SKS    KE+N  + ++ ++   L+   +++  ++
Sbjct: 571  PNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q +  D  + K +++KS    A   G   ++  F  +
Sbjct: 613  NELKKKEEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              V +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPVRQSIIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLDTVTSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++ + + L+ EK++ A  L+  ++ EE+   L  E   L+ + 
Sbjct: 846  IELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREY--EEQAEQKIN-FQQEIEMLLKIASKIK 869
            K   E   PL    EKL  +  +L   ++R++   + A+ KIN  +++++ +      I+
Sbjct: 906  KDAKEQISPLETALEKLQQEKEEL---IHRKHTSNKMAQDKINDIKEKVKNIHGYMKDIE 962

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
             Y    KD+  K+ + + +    ++  C+   ++I  ++   +  +  Q    R ++DNL
Sbjct: 963  NYIQDGKDDYKKQKETELNGVAVQLNECEKHREKINKDMGTMRQDIDTQKIQERWLQDNL 1022

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMS 987
              R+ +   D+     E  ++ + ++G +   + +     LE   D +    +   G   
Sbjct: 1023 TLRKRR---DELKEVEEEPKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQK 1079

Query: 988  VYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMK 1047
             Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MK
Sbjct: 1080 GYEDEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMK 1139

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRG 1102
            MEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRG
Sbjct: 1140 MEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRG 1199

Query: 1103 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQ 1162
            RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q
Sbjct: 1200 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQ 1259

Query: 1163 ENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             NFQL+VITHDE F +L+G+ ++ EK+YRV K+  Q S I
Sbjct: 1260 RNFQLLVITHDEDFVELLGRSEYVEKFYRVKKNMDQCSEI 1299


>gi|410265884|gb|JAA20908.1| RAD50 homolog [Pan troglodytes]
          Length = 1312

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 366/1242 (29%), Positives = 645/1242 (51%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 730  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 789

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 790  TDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 842

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 843  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 902

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L +K      + A+ K+N  +++++ +      I
Sbjct: 903  REIKDAKEQVSPLETTLEKFQQEKEEL-IKKKNTSNKIAQDKLNDIKEKVKNIHGYMKDI 961

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 962  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDN 1021

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1022 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     RSY+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|153945822|ref|NP_033038.2| DNA repair protein RAD50 [Mus musculus]
 gi|148701627|gb|EDL33574.1| RAD50 homolog (S. cerevisiae) [Mus musculus]
 gi|195934765|gb|AAI68398.1| RAD50 homolog (S. cerevisiae) [synthetic construct]
          Length = 1312

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 362/1241 (29%), Positives = 643/1241 (51%), Gaps = 91/1241 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  +    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRMKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  ++ + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLASSQEIVRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L      PFS     NF   ++ R
Sbjct: 344  AELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKER 403

Query: 298  -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI---KAGI 347
                    S L  DL DK+     ALK      L   DR   +    + K EI   K   
Sbjct: 404  QEREAKTASQLLSDLTDKE-----ALKQRQLDEL--RDRKSGLGRTIELKTEILTKKQSE 456

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
            L+H++ +       +L+ S+  +  +D+   K   E+ +     +    +  +   Q+E 
Sbjct: 457  LRHVRSELQ-----QLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEVMSLQNEK 511

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
              +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  
Sbjct: 512  ADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYF 570

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVD 524
            P  + L+              D L SKS    KE+N  + ++ ++   L+   +++  ++
Sbjct: 571  PNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q +  D  + K +++KS    A   G   ++  F  +
Sbjct: 613  NELKKKEEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              V +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPVRQSIIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLDTVTSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++ + + L+ EK++ A  L+  ++ EE+   L  E   L+ + 
Sbjct: 846  IELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREY--EEQAEQKIN-FQQEIEMLLKIASKIK 869
            K   E   PL    EKL  +  +L   ++R++   + A+ KIN  +++++ +      I+
Sbjct: 906  KDAKEQISPLETALEKLQQEKEEL---IHRKHTSNKMAQDKINDIKEKVKNIHGYMKDIE 962

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
             Y    KD+  K+ + + +    ++  C+   ++I  ++   +  +  Q    R ++DNL
Sbjct: 963  NYIQDGKDDYKKQKETELNGVAVQLNECEKHREKINKDMGTMRQDIDTQKIQERWLQDNL 1022

Query: 930  NYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTM 986
              R+ + ++     E+E   ++ LK +G +   + +     LE   D +    +   G  
Sbjct: 1023 TLRKRRDEL----KEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQ 1078

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
              Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+M
Sbjct: 1079 KGYEDEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSM 1138

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMR 1101
            KMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MR
Sbjct: 1139 KMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMR 1198

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  
Sbjct: 1199 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQ 1258

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            Q NFQL+VITHDE F +L+G+ ++ EK+YRV K+  Q S I
Sbjct: 1259 QRNFQLLVITHDEDFVELLGRSEYVEKFYRVKKNMDQCSEI 1299


>gi|149052578|gb|EDM04395.1| RAD50 homolog (S. cerevisiae) [Rattus norvegicus]
          Length = 1312

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 363/1236 (29%), Positives = 637/1236 (51%), Gaps = 81/1236 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  I    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRIKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  ++ + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   +  + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEARLLNQER 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A   L      PFS     NF   +R R
Sbjct: 344  AELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFHELVRER 403

Query: 298  -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGIL-K 349
                    S L  DL DK+     ALK          D  ++ ++     +E+K  IL K
Sbjct: 404  QEREAKTASQLLSDLTDKE-----ALKQR------QMDEMRDKKSGLGRMIELKTEILTK 452

Query: 350  HIKEKENERDSF-ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
               E  N R+   +L+ S+  +  +D+   K   E+ +     +    +  I   QSE  
Sbjct: 453  KQTELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEKA 512

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P
Sbjct: 513  DLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
              + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++ +
Sbjct: 572  NKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNELK 616

Query: 529  FIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERV 581
              E +L S   ++F +   Q     LD  KE  D++KS    A   G   ++  F  +  
Sbjct: 617  KKEEQLSSYEDKLFDVCGSQDFESDLDRLKE--DIEKSSKQRAMLAGATAVYSQFITQLT 674

Query: 582  ARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                  CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  
Sbjct: 675  DENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVP 734

Query: 641  VYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
            + +  + L ++ IP     L  +  ++ +     ++   +L  +  ++ES +V +  V  
Sbjct: 735  MRQSIIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTI 794

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELE 754
             +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + +++E
Sbjct: 795  MER-------FQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLDTVSSKIE 847

Query: 755  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              R   +  +  + +++ + + L+ EK++ A  L+  ++ EE+   L  E   L+ + K 
Sbjct: 848  LNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQTVELSTEVQSLNREIKD 907

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYD 873
              E   PL    EKL  +  +L  + N    + A+ KIN  +++++ +      I+ Y  
Sbjct: 908  AKEQINPLEIALEKLQQEKEELIHRKNTS-NKMAQDKINDIKEKVKNIHGYMKDIENYIQ 966

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              KD+  K+ + + ++   ++  C    ++I  E+   +  +  Q    R ++DNL  R+
Sbjct: 967  DGKDDYKKQKETELNEVVIQLNECDKHKEKINKEMGTMRQDIDTQKIQERWLQDNLTLRK 1026

Query: 934  TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQT 991
             + ++ +        ++ + ++G +   + +     LE   D +    +   G    Y+ 
Sbjct: 1027 RREELKEVEE---ERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEE 1083

Query: 992  NISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEI 1051
             I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD A+M+FH+MKMEEI
Sbjct: 1084 EILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEI 1143

Query: 1052 NKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSA 1106
            NKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSA
Sbjct: 1144 NKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSA 1203

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQ 1166
            GQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQ
Sbjct: 1204 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQ 1263

Query: 1167 LIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            L+VITHDE F +L+G+ ++ EK+YRV K+  Q S I
Sbjct: 1264 LLVITHDEDFVELLGRSEYVEKFYRVKKNIDQCSEI 1299


>gi|114601587|ref|XP_001163412.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pan troglodytes]
 gi|397518341|ref|XP_003829350.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pan paniscus]
 gi|410211712|gb|JAA03075.1| RAD50 homolog [Pan troglodytes]
 gi|410308950|gb|JAA33075.1| RAD50 homolog [Pan troglodytes]
 gi|410342397|gb|JAA40145.1| RAD50 homolog [Pan troglodytes]
          Length = 1312

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 367/1242 (29%), Positives = 645/1242 (51%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 730  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 789

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 790  TDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 842

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 843  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 902

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I
Sbjct: 903  REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDI 961

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 962  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDN 1021

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1022 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     RSY+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|19924129|ref|NP_005723.2| DNA repair protein RAD50 [Homo sapiens]
 gi|60392986|sp|Q92878.1|RAD50_HUMAN RecName: Full=DNA repair protein RAD50; Short=hRAD50
 gi|5739041|gb|AAD50325.1|AF057299_1 RAD50-2 protein [Homo sapiens]
 gi|1518806|gb|AAB07119.1| Rad50 [Homo sapiens]
 gi|119582733|gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens]
 gi|223459632|gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens]
          Length = 1312

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 366/1242 (29%), Positives = 645/1242 (51%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 730  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 789

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 790  TDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 842

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 843  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 902

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I
Sbjct: 903  REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDI 961

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 962  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDN 1021

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1022 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|297675945|ref|XP_002815909.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pongo abelii]
 gi|395736144|ref|XP_003776707.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Pongo abelii]
          Length = 1312

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 365/1242 (29%), Positives = 646/1242 (52%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +     ++  LD  KE+ +    +  +  G   ++  F
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 730  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 789

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 790  TDVTMMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 842

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 843  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 902

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I
Sbjct: 903  REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDI 961

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 962  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDN 1021

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1022 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHNLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|426349897|ref|XP_004042521.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Gorilla gorilla
            gorilla]
          Length = 1312

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 366/1242 (29%), Positives = 645/1242 (51%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQSELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 730  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 789

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 790  TDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 842

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 843  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 902

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I
Sbjct: 903  REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDI 961

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 962  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDN 1021

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1022 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|11560048|ref|NP_071582.1| DNA repair protein RAD50 [Rattus norvegicus]
 gi|60392975|sp|Q9JIL8.1|RAD50_RAT RecName: Full=DNA repair protein RAD50
 gi|9651650|gb|AAF91229.1|AF218576_1 Rad50 [Rattus norvegicus]
          Length = 1312

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 363/1239 (29%), Positives = 638/1239 (51%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  I    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRIKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  ++ + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   +  + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEARLLNQER 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A   L      PFS     NF   +R R
Sbjct: 344  AELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFHELVRER 403

Query: 298  -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGIL-K 349
                    S L  DL DK+     ALK          D  ++ ++     +E+K  IL K
Sbjct: 404  QEREAKTASQLLSDLTDKE-----ALKQR------QMDEMRDKKSGLGRMIELKTEILTK 452

Query: 350  HIKEKENERDSF-ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
               E  N R+   +L+ S+  +  +D+   K   E+ +     +    +  I   QSE  
Sbjct: 453  KQTELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEKA 512

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P
Sbjct: 513  DLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVDS 525
              + L+              D L SKS    KE+N  + ++ ++   L+   +++  +++
Sbjct: 572  NKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKNHINN 613

Query: 526  KKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIA--DGMRQMFDPF-- 578
            + +  E +L S   ++F +   Q     LD  KE  D++KS    A   G   ++  F  
Sbjct: 614  ELKKKEEQLSSYEDKLFDVCGSQDFESDLDRLKE--DIEKSSKQRAMLAGATAVYSQFIT 671

Query: 579  ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
            +        CP C+R F  E E  E +   + K   + + +K    E    +    ++  
Sbjct: 672  QLTDENQSCCPGCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLG 731

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
            L  + +  + L ++ IP     L  +  ++ +     ++   +L  +  ++ES +V +  
Sbjct: 732  LVPMRQSIIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTD 791

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQN 751
            V   +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + +
Sbjct: 792  VTIMER-------FQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLDTVSS 844

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD 811
            ++E  R   +  +  + +++ + + L+ EK++ A  L+  ++ EE+   L  E   L+ +
Sbjct: 845  KIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQTVELSTEVQSLNRE 904

Query: 812  EKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKE 870
             K   E   PL    EKL  +  +L  + N    + A+ KIN  +++++ +      I+ 
Sbjct: 905  IKDAKEQINPLEIALEKLQQEKEELIHRKNTS-NKMAQDKINDIKEKVKNIHGYMKDIEN 963

Query: 871  YYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLN 930
            Y    KD+  K+ + + ++   ++  C    ++I  E+   +  +  +    R ++DNL 
Sbjct: 964  YIQDGKDDYKKQKETELNEVVIQLNECDKHKEKINKEMGTMRQDIDTKKIQERWLQDNLT 1023

Query: 931  YRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
             R+ + ++ +        ++ + ++G +   + +     LE   D +    +   G    
Sbjct: 1024 LRKRREELKEVEE---ERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD A+M+FH+MKM
Sbjct: 1081 YEEEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YRV K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYVEKFYRVKKNIDQCSEI 1299


>gi|326670885|ref|XP_696859.4| PREDICTED: DNA repair protein RAD50 [Danio rerio]
          Length = 1312

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 360/1254 (28%), Positives = 638/1254 (50%), Gaps = 117/1254 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  I    GEKV LS +CA++DRE+ + +GVS+A+L +VIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVITRIKH--GEKVSLSSKCAEIDREMISSLGVSRAVLNHVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY K LE ++ L + Q   +K+ +++L+ L+  KD A ++RE +
Sbjct: 168  EGKALKQKFDEIFSATRYIKVLETLRTLRQKQTNTVKSCQMELKYLKQNKDKAQEIRELL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            S  + +  + K  +  +E  I  ++ +++  E +L  + K+ + I  + +R+  + +  +
Sbjct: 228  STKETQLASSKESVNRIEGQIDPLERRLNDIESSLGKVMKLDNDIKALDSRKKQMEDDNR 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +    + +  + +D++L++   N +  V ++E  + + +RE      + + + +      
Sbjct: 288  ELEEKMEQVFQGSDDQLQDMYQNHQRTVKEKEKRLVECQRELERAGRECQRMNRIKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLS-- 299
             E   L  EA  H   + +RD+ ++ L +   L      P S     +F  +I+ RL   
Sbjct: 348  VEQGRLQLEADRHTQNIKKRDTQVKTLASFLELEGYDRTPLSERQLQSFYRQIKERLDQD 407

Query: 300  ---------DLER----------DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK 340
                     D+++          DL DKK   E  +++            K+++A+KQ +
Sbjct: 408  SEALNQTMHDMQQKETQKQHNIDDLRDKKTGLERTIELK-----------KDLQAKKQQE 456

Query: 341  MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
                   LK+IK      D  +L+ S+  L  +D    K   E++           ++ +
Sbjct: 457  -------LKNIKS-----DLQKLEGSSNRLQELDTELQKAERELDNAVQACTVDSLKVEV 504

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
             +   E   +DQ  + L++E ++L   +  R ++ + K    + +++ +KI   + +++ 
Sbjct: 505  TELLKEKAQLDQAQRKLDQEMEMLNTHTTARAQMDMMKKTKMDKEEQVRKIKSRHNEELV 564

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
             +L G  P  ++L+              D + SKSRE           I+   + ++K  
Sbjct: 565  SLL-GHFPNKKELE--------------DWIYSKSRE-----------IKSTREQITKMN 598

Query: 521  KDVDS----KKRFI------ESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNI 567
            K++ S    K  +       E +L    +++F++     +Q  L   +++ +    +  +
Sbjct: 599  KELASGEQKKSHYTAEIKRKEEQLAKYEERLFNVCGSQDFQSDLSKLEDELEKCSKQRAM 658

Query: 568  ADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLE 624
              G   ++  F  +        CP C+R F +E E  + +   + K     + +K    +
Sbjct: 659  LAGATAVYSQFISQLTEEGDPCCPVCQRVFPSEAELQDVINDMQSKLRLVPDKLKNTEHD 718

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQI 684
                +    ++  L+ + +  V+L ++ +P     L  +  ++++     ++   +L  +
Sbjct: 719  LKRKERRRDEMMTLKPIRQSLVELQEKELPELRNQLQRVNRDIEKLKGDIEEQETLLCTL 778

Query: 685  KADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSG 741
             +++E+ +  +Q +   DR     QL  K V+       ++ QGV   RTM+++  E   
Sbjct: 779  VSEEETAKACLQDISLMDRF----QLDLKDVERKIAQHAAKLQGVDLSRTMQQVSQEKQE 834

Query: 742  SLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL 801
            +    D   +++E  R   +  +  +  ++   + +R EK++ ++ ++  ++ EE+    
Sbjct: 835  TQHRLDTTSSKIELKRKLIQDQQEQIQALRSSVNEIRGEKLQISSNMQKRQQLEEQCVEF 894

Query: 802  MEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQE---- 857
              E   L  D +   E + PL+   EKL  +  DL V+  R+ +E+ ++KIN  +E    
Sbjct: 895  STEIQTLHRDIRDAKEQASPLAATLEKLQQEKQDL-VERRRKKQEEGQEKINAIKEKMKN 953

Query: 858  IEMLLK-IASKIKEYYDLRKDERFKELQEKKSQ-SESEVKSCKIRTDEILVELDRFKDIV 915
            I +  K I   I+E  D  K+++  ELQE   Q  E+E +  K   D     +   +  +
Sbjct: 954  ITLFEKEITKYIEEGKDSYKEQKETELQEMDKQLHEAEKQREKTNKD-----MGNIRQDI 1008

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
              Q    R ++DNL  R+   ++ + + + E+L   + ++G +   +    +  +ER   
Sbjct: 1009 DTQKVQERWLQDNLTLRKRVEELKEVSRKREAL---IKEMGNMQVLQLRNERREVERKLE 1065

Query: 976  LSEVNR--CQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              + NR    G    Y+  I R + +L + QY   +  + D++I ++TTE+ANKDLD YY
Sbjct: 1066 DLKKNRSVALGRQKGYEDEILRFRKELNEDQYCRAEDLYRDKMIVMRTTELANKDLDIYY 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYK 1088
             ALD+ +MRFH+MKMEEINKIIR+LW+ TYRGQDI+Y+ I SD     S G   R+Y+Y+
Sbjct: 1126 KALDQTIMRFHSMKMEEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRTYNYR 1185

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GDA L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESL
Sbjct: 1186 VVMVKGDAALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESL 1245

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            A AL  I++ R  Q NFQL+VITHDE F +L+G+  + E +YR+ K+  Q S I
Sbjct: 1246 AHALVEIIKSRSRQRNFQLLVITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEI 1299


>gi|301754245|ref|XP_002913000.1| PREDICTED: DNA repair protein RAD50-like [Ailuropoda melanoleuca]
          Length = 1312

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 356/1254 (28%), Positives = 645/1254 (51%), Gaps = 117/1254 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A+  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHIQARDSLIQSLAAQLELDGFERGPFSERHIKNFHRLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E+A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEREAEIASQLMNDFAEKETLKQKQIDEIRDKKIGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  SKKQNELRNVKYELQQLEGS--SDRILELDQELSKAERELSKAEKNSNVEALKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFENDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              V +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  MELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLFREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL    EK   +  +L  K N+  +   ++  + +++++ +      I+ Y 
Sbjct: 906  KDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKDIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
               KD+  K+ + + ++  +++  C+   + I  ++   +  +  Q    R ++DNL  R
Sbjct: 966  QDGKDDYKKQKENELNKVMAQLSECEKHKENINTDMGIMRQDIDTQKIQERWLQDNLTLR 1025

Query: 933  E-------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD 973
            +                    + +V +  +E + LEE++  I               +R+
Sbjct: 1026 KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNI---------------KRN 1070

Query: 974  RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY
Sbjct: 1071 HSLA-IGRQKG----YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYY 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYK 1088
              LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+
Sbjct: 1126 KTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYR 1185

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESL
Sbjct: 1186 VVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESL 1245

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            A AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1246 AHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|184185449|gb|ACC68855.1| RAD50 homolog isoform 1 (predicted) [Rhinolophus ferrumequinum]
          Length = 1312

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 360/1239 (29%), Positives = 641/1239 (51%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFDDIFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDDIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TNKEAQLRSSKEIVKSYENELDPLKNRLKEIEQNLSKVMKLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     +DE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRER 403

Query: 298  -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKH 350
                   LS L  D  +K    E   +   D   D       I       +E+K+ IL  
Sbjct: 404  QEREAETLSQLMNDFAEK----ETLKQKQIDEIRDKKIGLGRI-------IELKSEIL-- 450

Query: 351  IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA- 409
              +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ + 
Sbjct: 451  -SKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNNNVETLKTEVISL 507

Query: 410  ------MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
                  +D+ ++ L++E + L   +  R +L +   +  +  ++ +KI   + D++  +L
Sbjct: 508  QYEKADLDRTLRKLDQEMEQLNHHTTTRTQLEMLTRDKADKDEQIRKIKSRHSDELNSLL 567

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDV 523
             G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  +
Sbjct: 568  -GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHI 611

Query: 524  DSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF-- 578
            +++ +  E +L +   ++F +   Q     LD  KE+ +    +  +  G   ++  F  
Sbjct: 612  NNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFIT 671

Query: 579  ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
            +        CP C+R F  E E  E +   + K   + + +K    +    +    ++  
Sbjct: 672  QLTDDNQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESDLKKKEKRRDEMLG 731

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
            L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  
Sbjct: 732  LVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTD 791

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQN 751
            V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +
Sbjct: 792  VTIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLDTVSS 844

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD 811
            ++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  +
Sbjct: 845  KIELNRKLIQDQQEQIQHLKSVTNELKSEKLQISTNLQRRQQLEEQSVELSTEVQSLHRE 904

Query: 812  EKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEY 871
             K   E  GPL    EKL  +  +L  K N   +   ++  + +++++ +      I+ Y
Sbjct: 905  IKDAKEQVGPLEITLEKLQQEKEELIYKKNTSNKVTQDKMNDIKEKVKNIHVYVKNIENY 964

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++   ++  C+   ++I  E+   +  +  Q    R ++DNL  
Sbjct: 965  IQDGKDDYKKQKETELNKVILQLSECEQHKEKINKEMGIMRQDIDTQKIQERWLQDNLTL 1024

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G  + 
Sbjct: 1025 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQELESKIDNIKRNHSLATGRQTG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I R K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIRFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYMEKFYRIKKNIDQCSEI 1299


>gi|332221676|ref|XP_003259989.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Nomascus leucogenys]
          Length = 1313

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 364/1243 (29%), Positives = 646/1243 (51%), Gaps = 94/1243 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  ++ + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRTRDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522  DVDSKKRFIESKLESLNQQIFSI----DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
             ++++ +  E +L S   ++F +      ++  LD  KE+ +    +  +  G   ++  
Sbjct: 610  HINNELKRKEEQLSSYEDKLFDVCGEFHHFESDLDRLKEEIEKSSKQRAMLAGATAVYSQ 669

Query: 578  F--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQ 634
            F  +        CP C+R F  E E  E +   + K   + + +K    E    +    +
Sbjct: 670  FITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDE 729

Query: 635  LDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVL 694
            +  L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V 
Sbjct: 730  MLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVC 789

Query: 695  VQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDN 748
            +  V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D 
Sbjct: 790  LTDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDT 842

Query: 749  LQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL 808
            + +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L
Sbjct: 843  VSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSL 902

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASK 867
              + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      
Sbjct: 903  YREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKD 961

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            I+ Y    KD+  K+ + + ++  +++  C+   ++I  +    +  +  Q    R ++D
Sbjct: 962  IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDRRIMRQDIDTQKIQERWLQD 1021

Query: 928  NLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQG 984
            NL  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G
Sbjct: 1022 NLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHNLALG 1077

Query: 985  TMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFH 1044
                Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH
Sbjct: 1078 RQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFH 1137

Query: 1045 TMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELE 1099
            +MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+
Sbjct: 1138 SMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALD 1197

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R
Sbjct: 1198 MRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSR 1257

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 SQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1300


>gi|2687853|emb|CAA99729.1| RAD50 homologue hsRAD50 [Homo sapiens]
          Length = 1318

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 364/1248 (29%), Positives = 640/1248 (51%), Gaps = 105/1248 (8%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 116  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 173

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q+++ Y+++L+ L+  K+ A ++R+ I
Sbjct: 174  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVEEYQMELKYLKQYKEKACEIRDQI 233

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 234  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 289

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 290  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 349

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 350  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 407

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 408  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 458

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 459  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 514

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 515  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 573

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E           I +  D L+K  K++ 
Sbjct: 574  GYFPNKKQLE--------------DWLHSKSKE-----------INQTRDRLAKLNKELA 608

Query: 525  SK---KRFIESKLESLNQQIFSID----------TYQKVLDSAKEKRDVQKSKYNIADGM 571
            S    K  I ++LE   +Q+ S +           ++  LD  KE+ +    +  +  G 
Sbjct: 609  SSEQNKNHINNELERKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGA 668

Query: 572  RQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNA 628
              ++  F  +        CP C+R F  E E  E +   + K   + + +K    E    
Sbjct: 669  TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEAISDLQSKLRLAPDKLKSTESELKKK 728

Query: 629  DSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADK 688
            +    ++  L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++
Sbjct: 729  EKRRDEMLGLAPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEE 788

Query: 689  ESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGS 742
            ES +V +  V   +R       +Q ++ D+E  +  +    QG+   RT++++  E    
Sbjct: 789  ESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEK 841

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
                D + +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L 
Sbjct: 842  QHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELS 901

Query: 803  EEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEML 861
             E   L  + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +
Sbjct: 902  TEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNI 960

Query: 862  LKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQI 921
                  I+ +    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q   
Sbjct: 961  HGYMKDIENHIQDGKDDYMKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDTQKIQ 1020

Query: 922  RRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEV 979
             R ++DNL  R+   ++       E  ++ + ++G +   + +     LE   D +    
Sbjct: 1021 ERWLQDNLTLRKRNEEL---KEVEEEGKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNH 1077

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
            N   G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A
Sbjct: 1078 NLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQA 1137

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTG 1094
            +M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  G
Sbjct: 1138 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKG 1197

Query: 1095 DAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHR 1154
            D  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  
Sbjct: 1198 DTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVE 1257

Query: 1155 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 IIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1305


>gi|403416796|emb|CCM03496.1| predicted protein [Fibroporia radiculosa]
          Length = 1271

 Score =  421 bits (1083), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 358/1217 (29%), Positives = 619/1217 (50%), Gaps = 80/1217 (6%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +  K +ES+L   +   G++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ WPL
Sbjct: 108  LTMKTLESILALADEKNGKRAAISTKCAEMDAEIPHLLGVSKAVLENVIFCHQEDSYWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFDDIF AT+YTKAL+ IK L KD+  ++K  K +LE+L   K  A KL+  
Sbjct: 168  AEPSILKKKFDDIFEATKYTKALDNIKALRKDRMADLKAEKERLESLSKEKGHADKLKTR 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDI---DDKIHHTELTLKDLRKMQDQISTMTARRSTLF 177
            +S+      + + +  +L+K  +++   + + + +    +++    D ++   AR    +
Sbjct: 228  MSELTGTIASKEMEHGQLQKQYEELVKANARFYESATKFREIYIKVDTLNEKKAR----Y 283

Query: 178  EQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            +++        +E++ TD+EL +   NF+        D  + +++K  M       EQ +
Sbjct: 284  QEELDTARESVKELDGTDQELTDRLRNFD--------DHMQRQKQKRSMGMS---KEQEV 332

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
            D   A+      +A AH   + +R++TI+++ A++ +      P   +  L FI    ++
Sbjct: 333  DEMLAD----ERKAHAHKQLIEDREATIKQICAKYQIQGFDQTPLERDKVLEFI----TK 384

Query: 298  LSDLER--DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK---AGILKHIK 352
            L DL R  + E  K  DE   K + +    A      +E  KQ K   +   A     + 
Sbjct: 385  LEDLRRRQNTETDKLQDEHNAK-SEEYNTKAMRLHTELEGHKQQKSAFRERIATSTARVS 443

Query: 353  EKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQ 412
            E ENE D  E   S L     D  E   R  VE+    +    F+  +    ++  +M+ 
Sbjct: 444  EAENEVDQAEALTSQLRALQADMDEKSRR--VEKSKTDIKAGNFDQRLSDANAKGRSMEM 501

Query: 413  KIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRD 472
            K   L  E   L+  ++ R +L LK+AEL++        ++    K R ++      D  
Sbjct: 502  KRDELTAEIRTLSLQADARARLDLKRAELKSKSSDLNNTLEINNSKFRKLVGIDAHPD-T 560

Query: 473  LKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIES 532
            +++E+ +       E  DL +++  A K +   +  +  +   LS  +K++    + I  
Sbjct: 561  MEREVERVAIEKEREHTDLENETNIASKNLQAAEANLSNLKAQLSTKQKEIQRLDKKIAF 620

Query: 533  KLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCE 592
            +L+      FS  + +  L  A  + D +K +     G + ++    +V +    CP C 
Sbjct: 621  ELKDAG---FS--SIESGLKEADYEIDTRKEELGKTAGAQDLYLRLLQVGKGRKCCPLCT 675

Query: 593  RPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSK 650
            R  S  E D + K  K+ +K ++ A  +K    E +  +   +QL  L+M       + K
Sbjct: 676  RNMSDLELDVYDKNVKENIKKSTPAA-IKETKSELAMWEDALKQLQGLQMDDNTRETIQK 734

Query: 651  ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQL 710
               P  E  + E  +E+   ++  ++ L  L ++K + + +  + Q   +  +  ++I+ 
Sbjct: 735  IEAPKLEAQIKEHDDEMPILTERAEEALRKLNEVKKEIKEISAMRQHATSVSQTQKDIER 794

Query: 711  WQKQVDDLEYMLDSRGQGVRTMEEIQLEL---SGSLSTKD----NLQNELEKLRDEQRYM 763
             ++++  LE  L + G   +T +++Q EL   S  +   D    NL  E ++L +  R  
Sbjct: 795  LKREISSLESELSATG-STKTADDLQQELDELSAEMRANDREKQNLMTERDRLMNALRNH 853

Query: 764  ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL-----DLDEKLLAEA 818
            + +L  +++R   L+ +       +R+    E  ++ L  +         DLD K+ A+A
Sbjct: 854  DTELGTMRVRESELKSQ-------IREKTALEGRIKELRSDIASFTNQLKDLDVKI-ADA 905

Query: 819  SGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
             GP+ K +++      +L  K++R   ++A Q +N     + L  I   I++Y   RK  
Sbjct: 906  QGPIEKLEQQYHEAQRELNAKISRA--QRASQDLNMS--ADKLESINKTIEKYVRERKAR 961

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            R KE  EK  + E+E++   ++ ++I   +      +        N+ +NL  R  +  +
Sbjct: 962  RLKECNEKIEEHETEIQRLGLQLEDIRSTIHLIDKEISESGASVANLRENLRIRRLRQDI 1021

Query: 939  DKFASEIESLE-ERVLKIGGVSTFETELGKHLLERDR---LLSEVNRCQGTMSVYQTNIS 994
                 EI+ ++ E   K   +  FE    K+ +E+ R   + S+     G +S  Q  + 
Sbjct: 1022 AATQDEIDLIDLEEAAKAKRI--FEE---KYNVEKQRETHIQSKYAHIGGELSSLQAQVK 1076

Query: 995  RNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKI 1054
              + D+K   YKDI K++ DQLI++K ++MAN DL++Y  ALD A+M++H++KMEE+N  
Sbjct: 1077 TLQTDMKD--YKDIGKKYRDQLIKVKMSDMANNDLEKYAKALDNAIMKYHSLKMEEVNDT 1134

Query: 1055 IRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCSAGQKVLAS 1113
            +R LW +TY+G DID I+I SDSEG  T RSY+Y+V+M   + E++MRGRCSAGQK+LAS
Sbjct: 1135 MRHLWNKTYQGTDIDGIKISSDSEGGATKRSYNYRVVMTKDNVEMDMRGRCSAGQKMLAS 1194

Query: 1114 LIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHD 1173
            +IIRLALA++F  NCGILALDEPT  LD  N ++LAA+L  I+ +RKG  +FQL++ITHD
Sbjct: 1195 IIIRLALADSFGQNCGILALDEPTNALDTENIDALAASLVDIINERKGNSSFQLVIITHD 1254

Query: 1174 ERFAQLIGQRQHAEKYY 1190
            E F + +GQ    E Y+
Sbjct: 1255 ENFLRKLGQSNVMEHYW 1271


>gi|354472602|ref|XP_003498527.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
            [Cricetulus griseus]
          Length = 1312

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 352/1229 (28%), Positives = 638/1229 (51%), Gaps = 67/1229 (5%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E ++ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGII-TRKKH-GEKVSLSSKCAEIDREMISCLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  ++ + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLASSQEIVKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A   L      PFS+    NF   +R  
Sbjct: 344  AELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSDRQIKNFHELVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDAN--DRWKNIEAQKQAKMEIKAGIL-KHIKEK 354
                ER   + K + +L   +     L  N  D  ++ ++     +E+K  +L K   E 
Sbjct: 402  ----ERQEREAKTASQLLNDLTEKETLKQNQIDEIRDKKSGLGGMIELKTELLTKKQSEL 457

Query: 355  ENERDSF-ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQK 413
             N ++   +L+ S+  +  +D+   K   E+ +     +    +  +   Q+E   +D+ 
Sbjct: 458  RNVKNELQQLEGSSDRILELDQELTKAERELNKAEKNSSVETLKAEVISLQNEKAELDRS 517

Query: 414  IKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDL 473
            ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P  + L
Sbjct: 518  LRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLL-GYFPNKKQL 576

Query: 474  KKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESK 533
            +              D L SKS+E ++  + L  K+ +   +  +++  ++++ +  E +
Sbjct: 577  E--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKSHINNELKKKEEQ 621

Query: 534  LESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVC 588
            L S   ++F +   Q    D  + K +++KS    A   G   ++  F  +        C
Sbjct: 622  LSSYEDKLFDVCGSQDFESDLGRLKEEIEKSSKQRAMLGGATAVYSQFITQLTDENQSCC 681

Query: 589  PCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK 647
            P C+R F  E E  E +   + K   + + +K    E    +    ++  L  + +  + 
Sbjct: 682  PVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIID 741

Query: 648  LSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQE 707
            L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V   +R    
Sbjct: 742  LKEKEIPELRNKLQSVNRDIQRLKTDIEEQETLLGTIMPEEESAKVCLTDVTIMER---- 797

Query: 708  IQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQR 761
               +Q ++ D+E  +  +    QGV   RT++++  E        D + +++E  R   +
Sbjct: 798  ---FQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQ 854

Query: 762  YMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP 821
              +  + +++ + + L+ EK++ +  L+  ++ EE+   L  E   L  + K   E   P
Sbjct: 855  DQQEQIQHLKSKTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQSLYREIKDAKEQINP 914

Query: 822  LSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERF 880
            L    EK   +  +L +   +   + A+ KIN  +++++ +      I+ Y    KD+  
Sbjct: 915  LETALEKFQQEKEEL-IHRKQTSNKMAQDKINDIKEKVKNINGYMKDIENYIQDGKDDYK 973

Query: 881  KELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDK 940
            K+ + + ++  +++  C    ++I  E+   +  +  Q    R ++DNL  R+ + ++  
Sbjct: 974  KQKETELNEVVAQLNECDKHKEKINKEMGTMRQDIDTQKIQERWLQDNLTLRKRREEL-- 1031

Query: 941  FASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKI 998
                 E  ++ + ++G +   + +     LE   D +    +   G    Y+  I   K 
Sbjct: 1032 -KEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEEEILHFKK 1090

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+L
Sbjct: 1091 ELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDL 1150

Query: 1059 WQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLAS 1113
            W+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLAS
Sbjct: 1151 WRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLAS 1210

Query: 1114 LIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHD 1173
            LIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+VITHD
Sbjct: 1211 LIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHD 1270

Query: 1174 ERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            E F +L+G+ ++ EK+YRV K+  Q S I
Sbjct: 1271 EDFVELLGRSEYVEKFYRVRKNMDQCSEI 1299


>gi|332309233|ref|NP_001193797.1| DNA repair protein RAD50 [Bos taurus]
 gi|296485646|tpg|DAA27761.1| TPA: RAD50 homolog [Bos taurus]
          Length = 1312

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 358/1252 (28%), Positives = 644/1252 (51%), Gaps = 113/1252 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     +DE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   M  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHRLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      ++K  E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEKEAETASQLLNDFVRKEALKQKQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  TKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKYRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  TELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEK 755
               +RL  E++  ++++      L    QG+   R+++++  E        D + +++E 
Sbjct: 793  TIMERLQMELKDVERKIAQQAAKL----QGLDLDRSVQQVNQEKQEKQHKLDTVSSKIEL 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLL 815
             R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K  
Sbjct: 849  NRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLHREIKDA 908

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDL 874
             E   PL    EK   +  +L  K N  +   A+ KIN  +++++ +      I+ Y   
Sbjct: 909  KEQLSPLETTLEKFQQEKEELINKKNTSH-RTAQDKINEIKEKVKNIHSYMKDIENYIQD 967

Query: 875  RKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE- 933
             KD+  K+ + + ++  +++  C    ++I  E+   +  +  Q    R ++DNL  R+ 
Sbjct: 968  GKDDYKKQKETELNKVIAQLSECDKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKR 1027

Query: 934  ------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
                               + +V +  +E + LEE++  I               +R+  
Sbjct: 1028 NEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNI---------------KRNHS 1072

Query: 976  LSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNA 1035
            L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  
Sbjct: 1073 LA-IGRQKG----YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKT 1127

Query: 1036 LDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVL 1090
            LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+
Sbjct: 1128 LDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVV 1187

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA 
Sbjct: 1188 MLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAH 1247

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1248 ALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSQI 1299


>gi|355750168|gb|EHH54506.1| hypothetical protein EGM_15366 [Macaca fascicularis]
          Length = 1312

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 362/1237 (29%), Positives = 645/1237 (52%), Gaps = 83/1237 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILNK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE-----FEINIRQKQSE 406
            K+ E +   +ELQ    +   I E + ++ I+ ER+ ++ AE+       ++ +   Q+E
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAERELSK-AEKNRNVETLKMEVISLQNE 510

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
               +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G 
Sbjct: 511  KADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GY 569

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
             P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++
Sbjct: 570  FPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNE 614

Query: 527  KRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERV 581
             +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +  
Sbjct: 615  LKIKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLT 674

Query: 582  ARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                  CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  
Sbjct: 675  DENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVP 734

Query: 641  VYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
            + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V  
Sbjct: 735  MRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTI 794

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELE 754
             +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E
Sbjct: 795  MER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIE 847

Query: 755  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K 
Sbjct: 848  LNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKD 907

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYD 873
              E   PL    EK   +  ++  K N    + A+ K+N  +++++ +      I+ Y  
Sbjct: 908  AKEQVSPLETTLEKFQQEKEEIINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENYIQ 966

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  R 
Sbjct: 967  DGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLR- 1025

Query: 934  TKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQ 990
               K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    Y+
Sbjct: 1026 ---KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKGYE 1082

Query: 991  TNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
              I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEE
Sbjct: 1083 EEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEE 1142

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCS 1105
            INKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCS
Sbjct: 1143 INKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCS 1202

Query: 1106 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF 1165
            AGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q NF
Sbjct: 1203 AGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQRNF 1262

Query: 1166 QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            QL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1263 QLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|73971132|ref|XP_531901.2| PREDICTED: DNA repair protein RAD50 [Canis lupus familiaris]
          Length = 1312

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 354/1254 (28%), Positives = 643/1254 (51%), Gaps = 117/1254 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E+A ++  D       + + I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEREAEIASQLMNDFAEKETLKQEQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  SKKQNELRNVKYELQQLEGS--SDRILELDQELSKAERELSKAEKNSNVEVLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  +
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDI 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  +  ++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  MELNRKLIQDQQEQIQYLKSTTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQSLSREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL    EK   +  +L  K N+  +   ++  + +++++ +      I+ Y 
Sbjct: 906  KDAKEQLSPLETILEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKDIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
               KD+  K+ + + +Q  +++  C+   + I  E+   +  +  Q    R ++DNL  R
Sbjct: 966  QDGKDDYKKQKENELNQVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQDNLTLR 1025

Query: 933  E-------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD 973
            +                    + +V +  +E + LEE++  I               +R+
Sbjct: 1026 KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNI---------------KRN 1070

Query: 974  RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              L+ + R +G    Y+  I   K +L++ Q++D +++H + +I ++TTE+ NKDLD YY
Sbjct: 1071 HSLA-IGRQKG----YEEEIIHFKRELREPQFRDAEEKHREMMIVMRTTELVNKDLDIYY 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYK 1088
              LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+
Sbjct: 1126 KTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYR 1185

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESL
Sbjct: 1186 VVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESL 1245

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            A AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1246 AHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|327265278|ref|XP_003217435.1| PREDICTED: DNA repair protein RAD50-like [Anolis carolinensis]
          Length = 1312

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 373/1254 (29%), Positives = 648/1254 (51%), Gaps = 117/1254 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++   QAQ +K  +++L  L+  K+ A++++  +
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRLKQAQRVKECQVELRYLKQNKEKAHEIQNQL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            S  + +  A K  ++ +E  ++ + +++   EL L  + K+ + I  + +R+  + +  Q
Sbjct: 228  SNREAQLAASKENVRSIENQLEPLKNRLTEIELNLVKVMKLDNDIKALESRKKQMEKDNQ 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + +  + TDE+L+    N +  V ++E  ++  +RE    + + +   +      
Sbjct: 288  DLQQKMEKVFQGTDEQLREMYQNHQKTVREKERRLTDCQRELERANKECQRFNREKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   ++ RDS IQ L A+  L     APF NE  +N  +++       
Sbjct: 348  VEQGRLQVQADRHQQHISTRDSLIQSLAAQLELEGFKRAPF-NERQINSFHKLVK----- 401

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKM-EI---KAGILKHIKEKENE 357
            ER  +DK+ +D+L  +            ++  EA KQ ++ EI   K G+ + I+ K + 
Sbjct: 402  ERQDKDKEAADQLTRE------------FEEKEATKQKQIDEIRDKKTGLERTIELKSDI 449

Query: 358  RDSFELQISNLN--LSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIK 415
            +    L++ NL   L  ++   +++ +E+++   +LA+   E++  +K  ++  ++++IK
Sbjct: 450  QSKKRLEVKNLKQELQQLEGSSDRL-LEIDQ---ELAKANHELDDAEKNCKVDILEKEIK 505

Query: 416  ALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKK 475
             L +EK  L G         L+K + E  +      I    D ++     +    R +K 
Sbjct: 506  ELQKEKSDLDG--------ILRKLDKEMEQLNLNTTIITQMDMLKKDKADKEEQIRKIKS 557

Query: 476  EITQALRALLTEF-------DDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
               + L +LL  F       D L SK +E ++  + L  K+ +   ++ +++  + ++ +
Sbjct: 558  RHNEELISLLGYFPNKRQLEDWLHSKMKEINQTRDRL-AKLNKELVSVEQNKNHISTELK 616

Query: 529  FIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVAR 583
              E +L S  +Q+F +   Q    D  + + +++K+    A   G   ++  F  +    
Sbjct: 617  KKEEQLSSYEEQLFDVCGSQDFESDLYRLQEEIEKTSKQRAMLAGATAVYSQFITQLTDE 676

Query: 584  AHHVCPCCERPFSAEEE-----DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                CP C+R F  E E     D+  KK R+    + + +K    E    +    ++  L
Sbjct: 677  NQSCCPVCQRVFGTESELQEVIDDLQKKLRL----APDKLKTTESELKRREKRRDEMMSL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
            + V +   +L ++ IP     L  L  E+ +     ++   +LA I  ++ES +  +Q +
Sbjct: 733  KPVRQTISELQEKDIPDLRNKLQALNREIQRLKGEIEEQETLLATIMPEEESAKACLQDI 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYML---DSRGQGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q  + D+E  +    ++ +GV   RT+ ++  E        D +  +
Sbjct: 793  TLMER-------YQTDLRDVERKIAQHSTKLEGVDLGRTLLQVSQEKQEKKHQWDTVTGK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  +  ++  ++ + +++   + L+ EK++  + L+  ++ E++   L  E   ++ + 
Sbjct: 846  IELKQTLKQDQQSQVQSLKSAVNELKAEKLQLCSRLQHRQQLEDQTVELTTEVQSMNREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL     KL  +   L  K N       E+  + +++++ +     +I+ Y 
Sbjct: 906  KEAKEQISPLETTLIKLQQEKEALMNKKNTSCRATQEKINDIKEKVKNINCYVKEIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIR-------TDEILVELDRFKDIVRNQDQIRRNI 925
               K+E        K Q ESE+   K++        ++I  E    +  +  Q    R +
Sbjct: 966  QEGKEEY-------KQQKESELDQVKVQLEECEKKKEKINKETGTIRQDIDTQKIQERWL 1018

Query: 926  EDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK-HL--LERDR-----LLS 977
            EDNL  R    K ++   E+E           +  +  E+G+ H+  L++DR      + 
Sbjct: 1019 EDNLTLR----KRNEDLKEVED---------NIKQYRKEMGEMHVPQLKKDREHLEGRIE 1065

Query: 978  EVNRCQ----GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
            E+ R      G    ++  I R K +L+  Q+KD ++++ + +I ++TTE+ANKDLD YY
Sbjct: 1066 ELKRNHSLALGRQHGFEEEILRYKKELRDPQFKDAEEKYREMMIVMRTTELANKDLDIYY 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYK 1088
             ALD+A+M FH+MKMEEINK IR+LW+ TYRGQDI+YI I SD     S     RSY+Y+
Sbjct: 1126 KALDQAIMTFHSMKMEEINKTIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYR 1185

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GD  L+MRGRCSAGQKVLASLIIRLALAE+FCLNCGILALDEPTTNLD  N ESL
Sbjct: 1186 VVMIKGDTALDMRGRCSAGQKVLASLIIRLALAESFCLNCGILALDEPTTNLDRENIESL 1245

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            A AL  I++ R  Q NFQL+VITHDE F +L+ + ++ EK+YR+ K+  Q S I
Sbjct: 1246 AHALVEIIKSRSQQRNFQLLVITHDEDFVELLSRSEYVEKFYRIKKNLEQCSEI 1299


>gi|335283461|ref|XP_003354322.1| PREDICTED: DNA repair protein RAD50 [Sus scrofa]
          Length = 1312

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 360/1252 (28%), Positives = 627/1252 (50%), Gaps = 113/1252 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV +S +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTVH-GEKVSISSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  +  ++   E  L  + ++ ++I  + +R+  + +   
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKSRLKEIEQNLSKIMRLDNEIKALDSRKRQMEKDNS 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +    + +  + TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q      
Sbjct: 288  ELEQKMEKVFQGTDEQLNDLYHNHQRTVREKEKRLVDCQRELEKLNKESRLLNQEKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS I  L  +  L      PFS     NF   +R R    
Sbjct: 348  VEQGRLQLQADRHQEHIRARDSLIHSLATQLELDGFERGPFSERQIKNFHKLVRER---- 403

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHIKEKE 355
                  +++  E A ++  D       + K I+  +  K      +E+K+ IL    +K+
Sbjct: 404  ------QEREAETASRLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEIL---SKKQ 454

Query: 356  NERDSFELQISNLNLS-----HIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
            NE  + + ++  L  S      +D    K   E+ +          +I +   Q+E   +
Sbjct: 455  NELRNVKYELQQLEGSSDRILELDRELTKAEHELSKAEKNSNVETLKIEVISLQNEKADL 514

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            D+ ++ L++E + L   +  R ++ +   +  +  +  +KI   + D +  +L G  P  
Sbjct: 515  DRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEHIRKIKSRHSDVLSSLL-GYFPNK 573

Query: 471  RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI 530
            + L+              D L SKS    KE+N  + KI ++   L+   ++ +     +
Sbjct: 574  KQLE--------------DWLHSKS----KEINQTRDKIAKLNKELASAEQNKNHIINEV 615

Query: 531  ESK---LESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVA 582
            +SK   L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +   
Sbjct: 616  KSKDEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTD 675

Query: 583  RAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV 641
                 CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  +
Sbjct: 676  ENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPM 735

Query: 642  YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETA 701
             +  + L ++ IP     L  +  ++       ++   +L  I  ++ES +V +  V   
Sbjct: 736  RQSIIDLKEKEIPALRNKLQNVNRDIQSLKIDIEEQDTLLGAIIPEEESAKVCLTDVTIM 795

Query: 702  DRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEK 755
            +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + +++E 
Sbjct: 796  ER-------FQLELKDVERKIAQQAAKLQGVDLHRTIQQVNQEKQEKQHKLDTVASKIEL 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLL 815
             R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K  
Sbjct: 849  NRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLQREIKDA 908

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDL 874
             E   PL    EK   +  +L  K N    + A+ KIN  +++++ +      I+ Y   
Sbjct: 909  KEQVNPLETTLEKFQQEKEELINKKNTS-SKIAQDKINDIKEKVKNIHGYVKDIENYIQD 967

Query: 875  RKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE- 933
             KDE  K+ + + ++   ++  C+   +++  E+   +  +  Q    R ++DNL  R+ 
Sbjct: 968  GKDEYKKQKETELNKVIVQLSECETHKEKVNKEMGIMRQDIDTQKIQERWLQDNLTLRKR 1027

Query: 934  ------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
                               + +V +  +E ++LEE++  I               +R+  
Sbjct: 1028 NEELKEVEEERKQHLKEMGQMQVLQMKNEHQNLEEKIENI---------------KRNHS 1072

Query: 976  LSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNA 1035
            L+ + R +G    Y+  I   K +L++ Q++D D+++ + LI ++TTE+ NKDLD YY  
Sbjct: 1073 LA-IGRQKG----YEEEIIHFKKELREPQFRDADEKYREMLIVMRTTELVNKDLDIYYKT 1127

Query: 1036 LDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVL 1090
            LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+
Sbjct: 1128 LDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVV 1187

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA 
Sbjct: 1188 MLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAH 1247

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1248 ALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|380808574|gb|AFE76162.1| DNA repair protein RAD50 [Macaca mulatta]
          Length = 1312

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 362/1239 (29%), Positives = 644/1239 (51%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILNK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  IELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEY 871
            K   E   PL    EK   +  ++  K N    + A+ K+N  +++++ +      I+ Y
Sbjct: 906  KDAKEQVSPLETTLEKFQQEKEEIINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENY 964

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  
Sbjct: 965  IQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTL 1024

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    
Sbjct: 1025 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|410948146|ref|XP_003980802.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Felis catus]
          Length = 1312

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 354/1230 (28%), Positives = 633/1230 (51%), Gaps = 69/1230 (5%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLISSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      ++K  E+A +M  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEKETEIANQMMNDFAEKETMKQKQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLS-----HIDERENKMRIEVERKTNQLAEREFEINIRQKQSE 406
             +K+NE  + + ++  L  S      +D+  +K   E+ +          +I +   QSE
Sbjct: 451  SKKQNELRNVKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEALKIEVISLQSE 510

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
               +D+ ++ L++E + +   +  R ++ +   +  +  ++ +KI   + D++  +L G 
Sbjct: 511  KADLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKSDKDEQIRKIKSRHSDELTSLL-GY 569

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
             P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++
Sbjct: 570  FPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHLNNE 614

Query: 527  KRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERV 581
             +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +  
Sbjct: 615  LKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLT 674

Query: 582  ARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                  CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  
Sbjct: 675  DENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVP 734

Query: 641  VYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
            + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V  
Sbjct: 735  MRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTI 794

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQ 760
             +R   E++  ++++      L     G RT++++  E        D + +++E  R   
Sbjct: 795  MERFQMELKDVERKIAQQAAKLQGLDLG-RTVQQVNQEKQEKQHKLDTVSSKIELNRKLI 853

Query: 761  RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG 820
            +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K   E   
Sbjct: 854  QDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLFREIKDAKEQLS 913

Query: 821  PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERF 880
            PL    EK   +  +L  K N   +   ++  + +++++ +      I+ Y    KD+  
Sbjct: 914  PLETTLEKFQQEKEELINKKNASNKIAQDKMNDIKEKVKNIHGYMKDIENYIQDGKDDYK 973

Query: 881  KELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDK 940
            K+ + + ++  +++  C+   + I  E+   +  +  Q    R ++DNL  R    K ++
Sbjct: 974  KQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQDNLTLR----KRNE 1029

Query: 941  FASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNK 997
               E+E   ++ LK +G +   + +     LE   D +    +   G    Y+  I   K
Sbjct: 1030 ELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKIDNIKRNHSLAIGRQKGYEEEIIHFK 1089

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
             +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+
Sbjct: 1090 RELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRD 1149

Query: 1058 LWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLA 1112
            LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLA
Sbjct: 1150 LWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLA 1209

Query: 1113 SLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITH 1172
            SLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+VITH
Sbjct: 1210 SLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITH 1269

Query: 1173 DERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            DE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1270 DEDFVELLGRSKYVEKFYRIKKNIDQCSEI 1299


>gi|229368749|gb|ACQ63030.1| RAD50 homolog isoform 1 (predicted) [Dasypus novemcinctus]
          Length = 1312

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 356/1242 (28%), Positives = 645/1242 (51%), Gaps = 93/1242 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  NNKEIQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKVMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKECRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A+  L      PF+     NF   +R R
Sbjct: 344  AELLVEQGRLQQQADRHQEHIRARDSLIQSLAAQLELDGFERGPFNERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E   ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QERESETVNQLMNDFTEKETLKQKQIDEMRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  NKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNSNVETLKTEVVSLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D +  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDDLTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K  +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKFNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  + +   + K   + + +K   L+    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQDIISDLQSKLRLAPDKLKSTELDLKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  V L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  +
Sbjct: 733  VPMRQSIVDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDI 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGIDLNRTIQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  + ++ +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  IELNRKLIQDQQEEIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEY 871
            K   E   PL    EK   +  DL  K N    + A+ K+N  +++++ +      I+ Y
Sbjct: 906  KDAKEQVSPLETTLEKFQQEKEDLINKKNTS-NKIAQDKLNDIKEKVKNIHGYVKDIENY 964

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++  +++  C+   ++I  E+   +  +  Q    R ++DNL  
Sbjct: 965  IQDGKDDYKKQKETELNKIIAQLSECEKHKEKINKEMGVMRQDIDTQKIQERWLQDNLTL 1024

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFET-----ELGKHLLERDRLLSEVNRCQGT 985
            R    K ++   E+E   ++ LK +G +   +      +LG+ +   D +    +   G 
Sbjct: 1025 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLGEKI---DSIKRNHDLALGR 1077

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I R K +L++  ++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1078 QKGYEEEIIRFKKELREPLFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1137

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+M
Sbjct: 1138 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDM 1197

Query: 1101 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
            RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRS 1257

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             Q NFQL++ITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1258 QQRNFQLLIITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|383408891|gb|AFH27659.1| DNA repair protein RAD50 [Macaca mulatta]
          Length = 1312

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 362/1239 (29%), Positives = 643/1239 (51%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ + I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNDIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILNK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  IELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEY 871
            K   E   PL    EK   +  ++  K N    + A+ K+N  +++++ +      I+ Y
Sbjct: 906  KDAKEQVSPLETTLEKFQQEKEEIINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENY 964

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  
Sbjct: 965  IQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTL 1024

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    
Sbjct: 1025 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|119582732|gb|EAW62328.1| RAD50 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
          Length = 1315

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 367/1248 (29%), Positives = 646/1248 (51%), Gaps = 102/1248 (8%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L   MA    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQL---MAKKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 449

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 450  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 505

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 506  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 564

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 565  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 606

Query: 522  DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
             ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 607  HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 666

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  E +   + K   + + +K    E    +    ++
Sbjct: 667  ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 726

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +
Sbjct: 727  LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 786

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNL 749
              V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D +
Sbjct: 787  TDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTV 839

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
             +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L 
Sbjct: 840  SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLY 899

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKI 868
             + K   E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I
Sbjct: 900  REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDI 958

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            + Y    KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DN
Sbjct: 959  ENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDN 1018

Query: 929  LNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGT 985
            L  R    K ++   E+E   ++ LK +G +   + +     LE   D +    N   G 
Sbjct: 1019 LTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGR 1074

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
               Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+
Sbjct: 1075 QKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHS 1134

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEM 1100
            MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+M
Sbjct: 1135 MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDM 1194

Query: 1101 RGRCSAGQK------VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHR 1154
            RGRCSAGQK      VLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  
Sbjct: 1195 RGRCSAGQKAGAFFQVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVE 1254

Query: 1155 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1255 IIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1302


>gi|343426959|emb|CBQ70487.1| probable RAD50-DNA repair protein [Sporisorium reilianum SRZ2]
          Length = 1309

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 375/1264 (29%), Positives = 643/1264 (50%), Gaps = 122/1264 (9%)

Query: 1    MEYKAIESVLQTIN--PHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +LQ  +    TG++  LS +C+++D E+P L+GVSK+ILENVIF HQ+++NW
Sbjct: 108  LTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDEEIPRLLGVSKSILENVIFCHQEDSNW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P++LKKKFDDIF ATRYTKAL+ IK L KD+  ++K  K  LE L+  KD A  ++
Sbjct: 168  PLSEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTNQLKVDKAALEGLKVDKDRADTIK 227

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
              ++        L+  + + E  ++D++++I    +          +   + +R  TL E
Sbjct: 228  TKLTH-------LQADLAQKEAKLEDLNEEIRVKTVQNSKFYDEATRFREIVSRAETLEE 280

Query: 179  QQQ------KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            +++          A    I+D+DE+L+  K  F+  + + +S I  L+R + + + +++ 
Sbjct: 281  KERLHKENMDALQATMTPIKDSDEDLQKRKQKFQSHLDQNQSKIHSLKRRQAEKEDELET 340

Query: 233  LEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
             EQ      +E   L +E  AH+    +R+++I+++     +        ++     F +
Sbjct: 341  QEQRHRKKLSEKGGLEAEKRAHLQAKEKREASIKQIGNELGIKGFGGDGLTDAQIRGFED 400

Query: 293  RIRSRLSDLERDLE-----DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK--- 344
            R++  +  L+ +L      + KK D L+              W+N+ A  +AK   +   
Sbjct: 401  RVKDEVRKLDDELARLREANSKKEDHLS------------QAWQNLRADHRAKQNAREQL 448

Query: 345  AGILKHIKEK----ENERDSFELQISNLNLSHIDERE-NKMRIEVERKTNQLAEREFEIN 399
            AG ++ ++EK    ++E D + L  +++  +   ERE + +  +      +  E +FE  
Sbjct: 449  AGSVRKLREKIKRAQDELDGYALSSTDIEAA---ERERDGLSAKAAAAQKEFEEAKFEEQ 505

Query: 400  IRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKI 459
            IR+K +++   D   +    E ++L   +E R  L LK  +    +   +++ D +K  +
Sbjct: 506  IRKKNADIREKDDLREERTAEINLLNRHAELRASLGLKMQQATTRRNNAQELFDRHKSAL 565

Query: 460  RDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKH 519
             + ++  + L  +++ E+T+ L       ++L + + + ++E       +Q++   LS  
Sbjct: 566  AERVRPDMQLG-EVEGEVTRVLSKHEKRLEELDATNADKNRE-------LQQIESALSFA 617

Query: 520  RKDVDSKKRFIESKLESLNQQIFS--IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            RK + SKK  + ++L+   Q I S   D  ++ +    E+    K +Y   D +      
Sbjct: 618  RKQLKSKKE-LAAELQRAIQAIISPDFDDAEEAVKICAEEIAAAKDEYASIDSLDSFLRR 676

Query: 578  FERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQ--- 634
              R A+    C  C R  S  E D   K      +SS    K  +L++ + D + ++   
Sbjct: 677  VLREAKGKGHCFACNRGVSPSEYDAIEKHVSSTLSSSNTAQKKKTLKA-DIDGWTERNAE 735

Query: 635  ------LDKLRMVYE--EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKA 686
                   D  R V +  E V+L        EK +     EL   ++A +     +A+++A
Sbjct: 736  CQTALAKDAQRKVIQDVEIVEL--------EKTISTKEAELKVAAEAAEASSAEVAKMQA 787

Query: 687  DKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLE---LSGSL 743
            + + ++ L +      RL  E      +V +L+  L S G   +T E++Q E   L+ S+
Sbjct: 788  ELKELQALRRVGTDIARLLSEANDLDAEVQNLQGDLASTG-STQTGEQVQAEIDQLAASI 846

Query: 744  STKDNLQNELEKLRDEQRYM----ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELE 799
                   N L++ R+ +R +    E D    ++   T ++E  K A+  + +++   ELE
Sbjct: 847  KVLKRELNALQQDRETKRTLINSLERDAHRAEVAVITKKQEYAKKASVEQQLQEMNAELE 906

Query: 800  HLMEEKGQLDLDEKLLAEASGPLSK---EKEKLLSDYNDLKVKLNREYEEQAEQKINFQQ 856
               +    LD++   +  A+GP+ +   E E   ++ ++ + KL    ++        + 
Sbjct: 907  EQQKRIKTLDVE---IESANGPIRRARDEHEAFKAEASEAESKLRARADK-------LEG 956

Query: 857  EIEMLLKIASKIKEYYDLRKDERFKELQE-------KKSQSESEVKSCKIRTDEILVELD 909
              + + ++ + +  Y   R D+R +E +E       K      EVK    +  E+  EL 
Sbjct: 957  WAKQICELNAAVNAYIQQRGDQRLEECKEAIQELVDKMQAIHREVKELTDKVAELQKEL- 1015

Query: 910  RFKDIVRNQDQ-IRRNIEDNLNYRETKAKVDKFASEIESLE----ERVLKIGGVSTFETE 964
                   NQ Q   RNI DN+ YR+    V K   EI SL+    +R  K      F  +
Sbjct: 1016 -------NQSQATERNILDNIRYRQLAKDVAKIEEEINSLDLEQAQRSRK-----HFADK 1063

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
              +   E +RL  E +   G ++  ++ I   +++L+  ++K + + +  +LI++KT+EM
Sbjct: 1064 YTEAKEEENRLNGEASHLSGELASLRSQIKGRELELRD-EFKGVHQNYKRKLIEVKTSEM 1122

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTR 1083
            AN DL++Y  AL+ A+MR+H +KMEEIN IIR LWQ+TY+G DID I I SD+EGA G R
Sbjct: 1123 ANNDLEKYAKALENAIMRYHAIKMEEINDIIRYLWQKTYQGTDIDTILIKSDNEGARGNR 1182

Query: 1084 SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
            SY+Y+V M     E++MRGRCSAGQKVLAS+IIRLALAE+F  NCGILALDEPTTNLD  
Sbjct: 1183 SYNYRVCMVKDTVEMDMRGRCSAGQKVLASIIIRLALAESFGSNCGILALDEPTTNLDKD 1242

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            N E+LA +L  ++++R      QLIVITHDE F  L+GQ    E Y+RV++D HQ SIIE
Sbjct: 1243 NIEALARSLADLIKERAENSQLQLIVITHDEDFLTLLGQNDVLEYYWRVSRDVHQKSIIE 1302

Query: 1204 AQEI 1207
             + I
Sbjct: 1303 RERI 1306


>gi|284004946|ref|NP_001164819.1| DNA repair protein RAD50 [Oryctolagus cuniculus]
 gi|217273043|gb|ACK28136.1| RAD50 homolog isoform 1 (predicted) [Oryctolagus cuniculus]
          Length = 1312

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 357/1237 (28%), Positives = 645/1237 (52%), Gaps = 83/1237 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  ++ + +++   E +L  + ++ ++I  + +R+    +Q Q
Sbjct: 228  TSKESQLTSSKEIVKSYENDLEPLKNRLKEIEHSLSKIMRLDNEIKALDSRK----KQMQ 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TD++L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDDQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PF+     NF   +R R
Sbjct: 344  SELLIEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFNERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDAN--DRWKNIEAQKQAKMEIKAGILKHIKEKE 355
                ER+ E    +++L    A    L     D  ++ +A     +E+K+ IL   K+ E
Sbjct: 404  ---QEREAET---ANQLMNDFAEKETLKQKQIDEIRDKKAGLGRIIELKSEILSR-KQSE 456

Query: 356  NERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA------ 409
             +   +ELQ     L    +R  ++  E+++   +L++ E   N+   ++E+ +      
Sbjct: 457  LKNVKYELQ----QLEGSSDRILELDQELKKAERELSKAEKNSNVETLKTEVISLQNEKA 512

Query: 410  -MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P
Sbjct: 513  DLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
              + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++ +
Sbjct: 572  NKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNELK 616

Query: 529  FIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVAR 583
              E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +    
Sbjct: 617  RKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDE 676

Query: 584  AHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVY 642
                CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  + 
Sbjct: 677  NQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMR 736

Query: 643  EEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETAD 702
            +  V L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V   +
Sbjct: 737  QSIVDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIME 796

Query: 703  RLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEKL 756
            R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E  
Sbjct: 797  R-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELN 849

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLA 816
            R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K   
Sbjct: 850  RKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVDLSTEVQSLLREIKDAK 909

Query: 817  EASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLR 875
            E   PL    EK   +  +L +       + A+ K+N  +++++ +      I+ Y    
Sbjct: 910  EQVNPLETALEKFQQEKEEL-ISKKHASNKIAQDKLNDIKEKVKNIHGYVKDIENYIQDG 968

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
            KD+  K+ + + ++  +++  C+   + I  E+   +  +  Q    R ++DNL  R   
Sbjct: 969  KDDYKKQKETELNKVTAQLSECEKHKETINKEMGIMRQDIDTQKIQERWLQDNLTLR--- 1025

Query: 936  AKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLERDRLLSEVNRCQ----GTMSVYQ 990
             K ++   E+E   ++ LK +G +   + +  +  L+ +  +  + R      G    Y+
Sbjct: 1026 -KRNEELKEVEEERKQHLKEMGQMQVLQMKNEQQKLQEN--IENIKRNHSLALGRQKGYE 1082

Query: 991  TNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
              I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEE
Sbjct: 1083 EEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEE 1142

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCS 1105
            INKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCS
Sbjct: 1143 INKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCS 1202

Query: 1106 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF 1165
            AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NF
Sbjct: 1203 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNF 1262

Query: 1166 QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            QL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1263 QLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|426229215|ref|XP_004008686.1| PREDICTED: DNA repair protein RAD50 [Ovis aries]
          Length = 1312

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 360/1257 (28%), Positives = 647/1257 (51%), Gaps = 123/1257 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + +  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     +DE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   M  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      ++K  E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEKESETASQLLNDFTRKEALKQKQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  TKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTAARTQMEMLNKDKADKDEQIRKIKYRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS-----KH 519
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+     K+
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKN 609

Query: 520  RKDVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFD 576
              +++ K++  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++ 
Sbjct: 610  HINIELKRK--EEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYS 667

Query: 577  PF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQ 633
             F  +        CP C+R F  E E  E +   + K   + + +K    E    +    
Sbjct: 668  QFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRD 727

Query: 634  QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
            ++  L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V
Sbjct: 728  EMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKV 787

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQ 750
             +  V   +RL  E++  ++++      L    QG+   R+++++  E        D + 
Sbjct: 788  CLTDVTIMERLQMELKDVERKIAQQAAKL----QGLDLDRSVQQVNQEKQEKQHKLDTVS 843

Query: 751  NELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDL 810
            +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  
Sbjct: 844  SKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR 903

Query: 811  DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIK 869
            + K   E   PL    EK   +  +L  K N  + + A+ KIN  +++++ +      I+
Sbjct: 904  EIKDAKEQLSPLETTLEKFQQEKEELVNKKNTSH-KIAQDKINEIKEKVKNIHSYMKDIE 962

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
             Y    KD+  K+ + + ++  +++  C+   ++I  E+   +  +  Q    R ++DNL
Sbjct: 963  NYIQDGKDDYKKQKETELNKVIAQISECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNL 1022

Query: 930  NYRE-------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLL 970
              R+                    + +V +  +E + LEE++  I               
Sbjct: 1023 TLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNI--------------- 1067

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            +R+  L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD
Sbjct: 1068 KRNHSLA-IGRQKG----YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLD 1122

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSY 1085
             YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y
Sbjct: 1123 IYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNY 1182

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N 
Sbjct: 1183 NYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENI 1242

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1243 ESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSEI 1299


>gi|402218631|gb|EJT98707.1| hypothetical protein DACRYDRAFT_101755 [Dacryopinax sp. DJM-731 SS1]
          Length = 1564

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 365/1255 (29%), Positives = 637/1255 (50%), Gaps = 108/1255 (8%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +  K +E +L T +   G++  +S +CA+MD E+P L+GVSK++LENVIF HQ+E+ WPL
Sbjct: 368  LTMKTLEGILGTADEARGKRSTISTKCAEMDIEIPRLLGVSKSVLENVIFCHQEESYWPL 427

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +P+ LKKKFDDIF AT+YTKAL+ IK L KD+  ++K  K KLE+L+  K+ A KLR  
Sbjct: 428  AEPAALKKKFDDIFEATKYTKALDSIKSLRKDRVADLKAEKEKLESLKLEKNRASKLRTQ 487

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQIST---MTARRSTLF 177
            I   Q    A+ ++  ELE+   + +      +   ++  K ++ ++    +T R+  L 
Sbjct: 488  IGTLQT---AIGDKEAELERLTAECEQLALSNQRFYENAVKFKETLTRVEYLTKRKEDLV 544

Query: 178  EQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIK-FLEQN 236
            +  +  + ++ E ++D  E++ +   +FE  ++++ES  +KL  + ND   +++ +  ++
Sbjct: 545  KNAESLHKSIKEIVDD--EDIGSKIKSFEQRMSQQESRRAKLTEDLNDELERLQVYRRKH 602

Query: 237  IDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
             D  TA+   L++E  A+  ++  R+  I  + ++ +L    +    N    +F  R++ 
Sbjct: 603  ADGMTAQ-GRLMAEKEAYSRQIATREDLIHDIASKRHLRGFEHGSLDNAKIEDFTRRLQ- 660

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDAND-RWKNIEAQKQAKMEIKAGILKHIKEKE 355
                   DL   + +  L LK    + L+  D R + +  ++ +  ++     K I + +
Sbjct: 661  -------DLLAAQNTQTLQLKNQSRTRLEELDSRLRKLSNERASNQQVINDAQKDISKLK 713

Query: 356  NERDSFELQISNLNLSHIDERENKMRIEVERK-----------TN---QLAEREFEINIR 401
             + D+F  QI +  +   + R     ++ E +           TN    LAER  EI  +
Sbjct: 714  QDVDNFTAQIDSSRMVDAELRRVGAELQSEEEKQSILHTASEATNFDRALAERNKEIRDQ 773

Query: 402  QKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRD 461
            Q   E          L RE+  L   ++ R +L+ ++ E++  +      +   + K   
Sbjct: 774  QDARE---------KLERERQGLMQQADTRARLSSRQQEMKRRRDNINTWLSSMEQKFEQ 824

Query: 462  VLKGRLPLDRDLKKEITQALR---ALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSK 518
             + G  P +  ++ EI+QA+R   A++ E +  S+ +            K +++  + S+
Sbjct: 825  AV-GHKPEENTMEGEISQAIREKEAVIAEEERTSTNA----------VAKYKQIESSKSR 873

Query: 519  HRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKE-----KRDVQKSKYNIADGMRQ 573
             ++D+  KK F++++   +N+           +D   E     K DV ++   I+     
Sbjct: 874  LQQDLQGKKDFVQTQRRRINEGKGDFPNIPAAVDFKTEELEQVKNDVAETAATIS----- 928

Query: 574  MFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESSNADSY 631
            +F+    +    H C  C+RP +  E   F +   + ++  +S E  K   +  +     
Sbjct: 929  LFNKIRDIGVKSHKCRACDRPLTDAELPAFQRHISRLLEKLNSPEAQKENEVTVNKLMED 988

Query: 632  FQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKA---DK 688
             ++L   +   EE  KL    IP+  + L+ +   L+    A D+    L Q +A   D 
Sbjct: 989  LRKLQDFQRDEEELNKLESVEIPIMARELNGVETSLESAILAADEAESRLKQGRASLRDL 1048

Query: 689  ESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSG-----SL 743
            +S+++    V TA     EI   Q+ +D L   L   G   R+MEE++ +L+       +
Sbjct: 1049 QSLKLTAAQVTTAS---SEIADIQRDIDQLMERLSIEGT-TRSMEELETDLNTVNNRIKI 1104

Query: 744  STKD--NLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTL----RDVKKAEEE 797
              +D  +L  E ++   EQR +E  + ++Q+R   L ++KVK   +L    +D K+A   
Sbjct: 1105 CEQDRQDLTAEKDRTLMEQRSLERRIHDLQLRQRDL-QDKVKERTSLEQRVKDSKEAMLS 1163

Query: 798  LEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQE 857
             E  +EE+ Q    ++L      PL +  E+  +++    +    E EE        ++ 
Sbjct: 1164 KEKSIEERRQAVSRDEL------PL-RNLERERAEFEKTSIA---EIEESVSISNELEKN 1213

Query: 858  IEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRN 917
            +E L    + I+ Y   RKD +   + ++    E+ +       + I   +      V  
Sbjct: 1214 VERLRTANAPIELYIRERKDRQLDAINQEIGDMETHITEANTAAESIRASVALLDKEVGE 1273

Query: 918  QDQIRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLLERDR-L 975
            Q  I  N+ DN+  RET+  + +  +EI + + E + K     +FE    K+ L +++  
Sbjct: 1274 QSTIMSNLRDNVRLRETQQGIAEVEAEIATHDLESMAK--ARRSFE---DKYSLSKEKEA 1328

Query: 976  LSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
            L+   R    G ++  +  + + + DL    YKDIDKR+ DQLI +K +++ N DL++Y 
Sbjct: 1329 LANSKRSHIGGEVTSMKAQLRQLQDDLT-TDYKDIDKRYTDQLITVKMSDLVNNDLEKYA 1387

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR-SYSYKVLMQ 1092
             ALD A+MR+H +KMEE+N  ++ LW +TY+G DID I+I SD EG  TR +Y+Y+V+M 
Sbjct: 1388 KALDNAIMRYHGLKMEEVNDTMKHLWNRTYQGTDIDGIKIRSDVEGGATRRTYNYRVVMT 1447

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
                E++MRGRCSAGQK+LAS+IIRLAL+++F  NCGILALDEPT  LD  N E+LAA+L
Sbjct: 1448 KDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTNALDAENVEALAASL 1507

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
              ++ +R+   NFQLIVITHDE+F Q +      E Y+RV++D  Q S+IE   I
Sbjct: 1508 ADLINERRNAANFQLIVITHDEKFLQKLASTDVMEFYWRVSRDAKQKSVIERNRI 1562


>gi|281211350|gb|EFA85515.1| DNA recombination/repair protein [Polysphondylium pallidum PN500]
          Length = 1301

 Score =  415 bits (1066), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 370/1266 (29%), Positives = 632/1266 (49%), Gaps = 137/1266 (10%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E++ +++ LQ+ N   G+KV  S+RC+D+D+E+P LMGV+K IL+NVIF HQ+E+ WPL 
Sbjct: 110  EFRQMDASLQSFNSE-GQKVSKSFRCSDLDKEIPELMGVAKPILKNVIFCHQEESLWPLS 168

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            + + LK KFD+IFSA RYTKAL+ IK   K+ + +IK  +LKLE + T ++ + ++ + I
Sbjct: 169  ESAKLKVKFDEIFSAVRYTKALKSIKDKKKEVSTQIKESRLKLEVVTTNREHSNRINKEI 228

Query: 122  SQDQEKTEALKNQMQELEKSIQD-------IDDKIHHTELTLKDLRKMQDQISTMTARRS 174
            +   ++   LK+ +++    +++       I  K+   +  ++++R M+        R+ 
Sbjct: 229  AAMNQQLVTLKDTLKQTASQLKEKRQQYDLITAKVTQVDAAVQEVRAME-------VRKV 281

Query: 175  TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIV-----AKRE--SDISKLEREKNDMD 227
             + + + + Y+ L E  +++D EL    N+F+  V     A++E   +++KL+ E++ + 
Sbjct: 282  EMEKARDRMYSGLTEVFDESDAELVFMTNSFQDEVNQMLQAQKELSDNLAKLQTERDTLA 341

Query: 228  TKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNE-----RDSTIQKLFARHNLGSLPNAPF 282
             K        ++ + E+  L       + +M E     RD  + +L +R+NL   P    
Sbjct: 342  AKK-------NSNSIEMGKL-----GQLLKMAEELAGNRDKQLAELASRYNLTYEPGK-- 387

Query: 283  SNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 342
                + + +  +  +L+D+   +                  L   DR+K   ++ ++   
Sbjct: 388  ----SQDVVESLTKKLNDISAVI------------------LANQDRFKQQISEAESAAN 425

Query: 343  IKAGILKHIKEKENERDSFELQISNLN-----LSHIDERENKMRIEVERKTNQ----LAE 393
                  K ++E+ N+ DS      NLN     L  ID  + K+ + +    NQ    +AE
Sbjct: 426  ESNIEKKQLEERINQLDS------NLNANMRKLEQIDAEKKKV-LSLSENANQYHQAIAE 478

Query: 394  REFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDR-------VKLALKKAEL---EN 443
             E  I   +   +L   D+KIK++ +++  L    E +        ++AL+++ L   +N
Sbjct: 479  SESTIEKLESDFQLAGYDEKIKSMIQQRKELEMSIEQKRTSITQANQMALQRSSLTFKQN 538

Query: 444  HKKKHKKIIDEY----KDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREAD 499
              +  +  I EY    K  + D+L G    +      ++  LR L    +  S + RE  
Sbjct: 539  ELRTKQACISEYLVNNKAMLDDLLNGEYTAEN-----LSSKLRDLGMSLESDSKERREES 593

Query: 500  KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTY---QKVLDSAKE 556
             +VN   +K    ++N     K V  +K     +LE L  Q+  +D+      + DS K 
Sbjct: 594  NDVNTQLIK----SEN---ELKIVIREKNAKIQQLEKLGVQLGKLDSAIVGDNIDDSIKT 646

Query: 557  KRD----VQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAA 612
              +    +QKS   I +    ++  +   A     C  C+   + ++   F+ K      
Sbjct: 647  LSNRLLQLQKS-LAILESEDVLYKEYIEKANNQKECSLCQNQMNDDDLHSFIHKLESHTD 705

Query: 613  SSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQ 672
               + +  L+ E        + L   + +YE  +KL +E IP+ EK   ++ + L +   
Sbjct: 706  GIPDKLATLTKEIKTTKDNLEILTANKPMYELQIKLKQEEIPMLEKREQDIQQTLTESLL 765

Query: 673  AFDDVLGVLAQIKADK-ESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRT 731
             F   +    Q+  +K + +  +V    + + L  E +    +V+  E +L   G G  +
Sbjct: 766  PFKKTIEESQQLLDNKMKKLNQMVLVASSVNMLCVETKKIVAEVEQQEQLLGVSG-GALS 824

Query: 732  MEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDV 791
            +E++  E     S  D++Q E+E+L  + +   ++L+ +Q      RE   KA+      
Sbjct: 825  VEQLNQEYDQLKSKSDSIQKEIERLTVDSKKNRSELNRLQQIVIQNRELLSKASG----- 879

Query: 792  KKAEEELEHLMEEKGQL-DLDEKLLAEAS-------GPLSKEKEKLLSDYNDLKVKLNRE 843
                E +EHL + + +L  ++E L+A+ S       G  +K  E      N L+ +L  E
Sbjct: 880  --QTEIVEHLKQSEKELRAINEDLIAKLSDFTQQLEGITAKSVE-FSGQLNSLREQLESE 936

Query: 844  YEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDE 903
              +  ++K  F  ++  +  +  +I     L K E+ + L     + +  + S      +
Sbjct: 937  SSKMTKEKTIFSNKLSAIKNLQQQIPSDL-LEKQEKLESLAMSNREIDINIDSINEDYSK 995

Query: 904  ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFET 963
             +   D+ K+ +   +  +R I DNL YR+ K   +  + EI    ++ L I  + T E 
Sbjct: 996  GVAHTDQIKNDLAQSEITKRVISDNLGYRQQKLNCESLSKEIT---KKNLSINSIITPEE 1052

Query: 964  E-LGKHLLERDRLL-SEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            + L K L     LL S++++  G +   + +I   + +L +  Y  ++  + D L+Q +T
Sbjct: 1053 QSLLKSLTADINLLKSKIDKSSGQVEAIEQHIRTAQTELAKPIYNSVETVYRDLLVQAET 1112

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG 1081
             E+ NKDLD+YY ALDKALM++H +KM+EINK IRELW  TYRG DID I I SD     
Sbjct: 1113 LELINKDLDKYYKALDKALMKYHVLKMDEINKTIRELWTATYRGNDIDTIEIRSDESTTA 1172

Query: 1082 TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             +  +Y+V+M  GD EL+MRGRCSAGQKVLA L+IRLALAE FC NCGILALDEPT+NLD
Sbjct: 1173 KKVINYRVVMLKGDVELDMRGRCSAGQKVLACLVIRLALAENFCTNCGILALDEPTSNLD 1232

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSI 1201
              N ES A AL  I+E +K Q  FQLI+ITHDE F Q +G+   A+ Y+RV KD +QHS+
Sbjct: 1233 RANIESFATALLNIIEAKKTQSGFQLIIITHDEEFVQYLGRGNFADYYWRVTKDANQHSL 1292

Query: 1202 IEAQEI 1207
            +E +EI
Sbjct: 1293 VERKEI 1298


>gi|71005132|ref|XP_757232.1| hypothetical protein UM01085.1 [Ustilago maydis 521]
 gi|46096811|gb|EAK82044.1| hypothetical protein UM01085.1 [Ustilago maydis 521]
          Length = 1309

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 361/1257 (28%), Positives = 636/1257 (50%), Gaps = 108/1257 (8%)

Query: 1    MEYKAIESVLQTIN--PHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +LQ  +    TG++  LS +C+++D E+P L+GVS++ILENVIF HQ+++NW
Sbjct: 108  LTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDDEIPRLLGVSRSILENVIFCHQEDSNW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P++LKKKFDDIF ATRYTKAL+ IK L KD+  ++K  K  LE L+  KD A  ++
Sbjct: 168  PLSEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTVQLKVDKAALEGLKVDKDRADTIK 227

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
              ++Q       L+  + + E  ++D++D+I    +          +   + +R  TL E
Sbjct: 228  AKLTQ-------LQADLAQKEAKLEDLNDEIRVKTIQNSKFYDEATRFREIVSRAETLEE 280

Query: 179  QQQ------KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            +++      +   A    I+DTDEEL   K  F   + + ++ I  L+R + + + +++ 
Sbjct: 281  KERLHKENMEALQATMTPIKDTDEELHKRKQEFHSYLDQNQNKIHSLKRRQAEKEDELET 340

Query: 233  LEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
             E+      +E   L +E  AH+    +R+++I+ +    ++        ++     F +
Sbjct: 341  HERRHRNKLSEKGGLEAEKRAHLHAKEKREASIKHIGNELDIKGFGGDGLTDTQIQAFEH 400

Query: 293  RIRSRLSDLERDLEDKKKSDELA-LKMAWDSYLDA-NDRWKNIEAQKQAKMEIKAGIL-- 348
            R++          E +K  DELA L+ A     D     W+N+ A+ +AK   +  ++  
Sbjct: 401  RVKD---------EVRKLDDELANLRQANSEKDDVLTTVWQNLRAELRAKQNAREQLIDS 451

Query: 349  -----KHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQK 403
                 + IK  ++E D   L  +++  + +D   + +  +     N+  E +++  IR+K
Sbjct: 452  VRKLREKIKRAQDELDGNALSTADIEAAELDR--DGLSAKATAAQNEFEEAKYDEQIRKK 509

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
             +E+   D   +    E ++L   +E R  L  KK +    +   +++ D  K  + +++
Sbjct: 510  NAEIREKDDLREERTSEINLLNRHAELRASLGFKKEQQTARRDSAQQLFDRNKAALIELV 569

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDV 523
            +  L L   ++ E+T+AL       ++L + +   ++E       +Q++   +S  RK +
Sbjct: 570  RSDLELPA-VENEVTRALSKREKRLEELEADNANRNRE-------LQQIESAISFTRKQL 621

Query: 524  DSKKRFIESKLESLNQQIFS--IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERV 581
             +K+  + + L+   Q I S   D  ++ +    E+    K +Y   D +        R 
Sbjct: 622  KTKQD-MAADLQKSVQDILSPDFDDAEEAVKICAEEIAAAKDEYASIDSLDSFLRRVLRE 680

Query: 582  ARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVL----------SLESSNAD 629
            A+    C  C R  +  E +   K     + + ++A+  K L          + E   A 
Sbjct: 681  AKGKGHCFACNRGVTPGEYEAIEKHVANTLSSGNTAQKKKTLMADIDGWTERNAECQTAL 740

Query: 630  SYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKE 689
            +   Q   ++ V  E V+L K    +  K +   +     ++ + D     L +++A+ +
Sbjct: 741  AKDAQRKAIQDV--EIVELQK---TILSKQVELESAAKAAEASSAD-----LTKMRAEVK 790

Query: 690  SVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNL 749
             ++ L +      RL  E      +V  L+  L S G   +T E++Q E+    ++   L
Sbjct: 791  DLQALRRVGSDIARLLSEANDLDAEVQKLQVNLASTG-STQTAEQVQAEIDQLTASIKAL 849

Query: 750  QNELEKL---RDEQRYM----ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
            + EL  L   R+ +R +    E D    ++   T R+E  K ++    +++   +LE   
Sbjct: 850  KRELNVLQQDRETKRTLINSLERDAHRAEVTVITKRQEYAKRSSMEEQLQEMNADLEDHQ 909

Query: 803  EEKGQLDLDEKLLAEASGPLSKEKEKLLS-------DYNDLKVKLNREYEEQAEQKINFQ 855
            +    L+++   +  A+GP+ + K++L +         N L+ + +R  E  A+Q     
Sbjct: 910  KRIKSLEVE---IEGANGPIRRAKDELEAFKAAASEAENTLRARADR-LEGWAKQ----- 960

Query: 856  QEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIV 915
                 + ++ + +  Y   R D+  +E +E   +   ++++      E+  ++   +  V
Sbjct: 961  -----IRELNAAVNAYIHQRGDQHLEECEEAIQELVGQIQAIHREVKELTDKVAELQKEV 1015

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE----ERVLKIGGVSTFETELGKHLLE 971
                   RNI DN+ YR+    V+K   EI SL+    +R  K      F  +  +   E
Sbjct: 1016 NQSQATERNIADNIRYRQLAKDVEKIEQEINSLDLEQAQRSRK-----HFADKYTEAKEE 1070

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDR 1031
             +RL  E +   G ++  ++ I   +++L+  +++ + + +  +LI++KT+EMAN DL++
Sbjct: 1071 ENRLNGEASHLSGELASLRSQIKGRELELRD-EFRGVHQNYKRKLIEVKTSEMANNDLEK 1129

Query: 1032 YYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVL 1090
            Y  AL+ A+MR+HT+KMEEIN IIR LWQ+TY+G DID I I SD+EGA G RSY+Y+V 
Sbjct: 1130 YAKALETAIMRYHTIKMEEINDIIRYLWQKTYQGTDIDTILIKSDNEGARGNRSYNYRVC 1189

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M     E++MRGRCSAGQKVLAS+IIRLALAE+F  NCGILALDEPTTNLD  N E+LA 
Sbjct: 1190 MVKDTVEMDMRGRCSAGQKVLASIIIRLALAESFGSNCGILALDEPTTNLDKDNIEALAR 1249

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            +L  ++++R      QLIVITHDE F  L+GQ    E Y+RV++D HQ S+IE + I
Sbjct: 1250 SLADLIKERAENSQLQLIVITHDEEFLTLLGQNDVLEYYWRVSRDVHQKSVIERERI 1306


>gi|281348671|gb|EFB24255.1| hypothetical protein PANDA_000728 [Ailuropoda melanoleuca]
          Length = 1311

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 354/1254 (28%), Positives = 643/1254 (51%), Gaps = 118/1254 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L A+  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQEHIQARDSLIQSLAAQLELDGFERGPFSERHIKNFHRLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E+A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEREAEIASQLMNDFAEKETLKQKQIDEIRDKKIGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  SKKQNELRNVKYELQQLEGS--SDRILELDQELSKAERELSKAEKNSNVEALKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFENDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              V +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  MELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLFREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL    EK   +  +L  K N+  +   ++  + +++++ +      I+ Y 
Sbjct: 906  KDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKDIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
               KD+  K+ + + ++  +++  C+   + I  ++   +  +  Q    R ++DNL  R
Sbjct: 966  QDGKDDYKKQKENELNKVMAQLSECEKHKENINTDMGIMRQDIDTQKIQERWLQDNLTLR 1025

Query: 933  E-------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD 973
            +                    + +V +  +E + LEE++  I               +R+
Sbjct: 1026 KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNI---------------KRN 1070

Query: 974  RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY
Sbjct: 1071 HSLA-IGRQKG----YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYY 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYK 1088
              LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+
Sbjct: 1126 KTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYR 1185

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GD  L+MRGRCSAGQK  ASLIIRLALAETFCLNCGILALDEPTTNLD  N ESL
Sbjct: 1186 VVMLKGDTALDMRGRCSAGQKA-ASLIIRLALAETFCLNCGILALDEPTTNLDRENIESL 1244

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            A AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1245 AHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1298


>gi|403255929|ref|XP_003920657.1| PREDICTED: DNA repair protein RAD50 [Saimiri boliviensis boliviensis]
          Length = 1312

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 360/1239 (29%), Positives = 647/1239 (52%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K+ ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKDIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQERETKSANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE-----FEINIRQKQSE 406
            K+ E +   +ELQ    +   I E + ++ I+ ER  ++ AE+       ++ +   Q+E
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAERDLSK-AEKNSNVETLKMEVINLQNE 510

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
               +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G 
Sbjct: 511  KADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GY 569

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
             P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++
Sbjct: 570  FPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNE 614

Query: 527  KRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERV 581
             +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +  
Sbjct: 615  LKRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLT 674

Query: 582  ARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                  CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  
Sbjct: 675  DENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVP 734

Query: 641  VYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
            + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES ++ +  V  
Sbjct: 735  MRQSVIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTI 794

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELE 754
             +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E
Sbjct: 795  MER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIE 847

Query: 755  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K 
Sbjct: 848  LNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKD 907

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYD 873
              E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I+ Y  
Sbjct: 908  AKEQISPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENYIQ 966

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  R 
Sbjct: 967  DGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLR- 1025

Query: 934  TKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLERDRLLSEVNRCQ----GTMSV 988
               K ++   E+E   ++ LK +G +   + +     LE +  +  + R      G    
Sbjct: 1026 ---KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEN--IENIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|167045855|gb|ABZ10522.1| RAD50 homolog isoform 1 (predicted) [Callithrix jacchus]
          Length = 1312

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 359/1237 (29%), Positives = 645/1237 (52%), Gaps = 83/1237 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSA RY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSAARYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQERETKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE-----FEINIRQKQSE 406
            K+ E +   +ELQ    +   I E + ++ I+ ER+ ++ AE+       ++ +   Q+E
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAERELSK-AEKNSNVETLKMEVINLQNE 510

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
               +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G 
Sbjct: 511  KADIDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GY 569

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
             P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++
Sbjct: 570  FPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNE 614

Query: 527  KRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERV 581
             +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +  
Sbjct: 615  LKRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLT 674

Query: 582  ARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                  CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  
Sbjct: 675  DENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVP 734

Query: 641  VYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
            + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES ++ +  V  
Sbjct: 735  MRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTI 794

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELE 754
             +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E
Sbjct: 795  MER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIE 847

Query: 755  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K 
Sbjct: 848  LNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKD 907

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYD 873
              E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I+ Y  
Sbjct: 908  AKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENYIQ 966

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  R 
Sbjct: 967  DGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLR- 1025

Query: 934  TKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLERD--RLLSEVNRCQGTMSVYQ 990
               K ++   E+E   ++ LK +G +   + +     LE +   +    N   G    Y+
Sbjct: 1026 ---KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIENIKRNHNLALGRQKGYE 1082

Query: 991  TNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
              I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEE
Sbjct: 1083 EEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEE 1142

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCS 1105
            INKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCS
Sbjct: 1143 INKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCS 1202

Query: 1106 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF 1165
            AGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q NF
Sbjct: 1203 AGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQRNF 1262

Query: 1166 QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            QL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1263 QLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|321265544|ref|XP_003197488.1| DNA repair protein Rad50 [Cryptococcus gattii WM276]
 gi|317463968|gb|ADV25701.1| DNA repair protein Rad50, putative [Cryptococcus gattii WM276]
          Length = 1289

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 382/1274 (29%), Positives = 644/1274 (50%), Gaps = 122/1274 (9%)

Query: 1    MEYKAIESVLQT--INPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +L    +    G++  +S +C++MD EVP L+GVS+AIL+NVIF HQ+E+NW
Sbjct: 68   LTMKTLEGILAKTDVGDGNGKRNTISTKCSEMDEEVPYLLGVSRAILDNVIFCHQEESNW 127

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P+ LKKKFDDIF AT+YTKAL+ IK L K++  E+K  K +L+ L+  KD A +LR
Sbjct: 128  PLSEPAALKKKFDDIFEATKYTKALDNIKSLRKERMAELKVDKERLKFLKADKDKAERLR 187

Query: 119  ----ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRS 174
                ESISQ+  K   L N ++E  ++I+ I +   + E TL   R++ +Q  ++  ++ 
Sbjct: 188  KDLEESISQENRKQAELDN-LKERYETIK-IRNAEFYEEATL--FRQIFEQSKSLKEKKK 243

Query: 175  TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLE 234
             ++E  +K      +E++++ EEL + + NF+   A  E+   +LE +++  + K   LE
Sbjct: 244  -MYEDNRKHSKLNMQEMDESTEELLHMQQNFD---AHLETLKMQLEEKEDAKEMKESLLE 299

Query: 235  QNIDAYTAEITNLLSEAGAHMSR-------MNERDSTIQKLFARHNLGSLPNAPFSNEAA 287
            +      A+  NL+++ G  ++        + ER++ I+++   H+L     +P  +   
Sbjct: 300  E----LRADERNLVNKQGGLVAHRQTYERNLREREAAIRQIAKTHDLVGYDYSPLEDSKV 355

Query: 288  LNFINRIRSRLSDLERDL-----EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 342
              F+N+I   +   E DL     E+ +K  EL          D  DR   ++A  QA  +
Sbjct: 356  AEFVNKIYEMVRKAENDLKKFQAENNRKERELQ---------DELDRLSTLKASAQATKK 406

Query: 343  IKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVE----RKTNQLAEREFE- 397
             K   +  + EK    ++    ISN ++  ++  +NK+ IE+E    +   ++A+ +++ 
Sbjct: 407  SKEDQIIKLTEKIRTSEATFHSISNPSV-ELELNQNKL-IELEADLAKFQTEIADAKYDE 464

Query: 398  -IN-----IRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKI 451
             IN     IRQK+ E  ++  ++  LNR+ D        R KL L++ ELE    +   +
Sbjct: 465  KINQRGLLIRQKELERDSISAELAVLNRKAD-------SRAKLDLQRNELEGKNSQITTL 517

Query: 452  IDEYKDKIRDVLKGRLPLDRDLKKE---------ITQALRALLTEFDDLSSKSREADKEV 502
            +  ++ K R++++  +    DLK E         I++  R L+ E +  S+ +R+  +  
Sbjct: 518  LKTHEAKFRELVEADI---HDLKPEDIEDKVIGAISRKDRDLMQEENSASALNRDHSQ-- 572

Query: 503  NMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQK 562
              +Q  +    + L+  +++V S +R IE+ + ++NQ     +   +   +  E  D+ +
Sbjct: 573  --VQASLNRAREELTIKKREVQSMQREIEAAIYNVNQPAEGEEVPAEEAKNLAEAFDICR 630

Query: 563  SKYNIAD-------GMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAAS 613
            S+            G R +++      +   VC  C R    EE++   +  + +++   
Sbjct: 631  SEIETVQRAIMDKQGSRVVWEGLLATVKVGGVCEACNRGIKHEEKNAVTRHMEAKIRQLM 690

Query: 614  SAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK---LSKETIPVAEKNLHELTEELDQK 670
             AE   V   E     S+ + LD L  V     K   L +  IP  E  + E  E+L   
Sbjct: 691  EAEQAGV-DAEIEVEKSWTEILDTLIRVEPHEAKIQDLQRRVIPRLEAQIEEGEEKLRSL 749

Query: 671  SQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVR 730
             +  DD    + ++K+    ++ L       + L+ EI   +     L+  L+S G   +
Sbjct: 750  VKEVDDSKASIQKLKSASRDLQSLKSTASYINHLYLEISDLKANAKRLQTELESSGSS-K 808

Query: 731  TMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ--IRWHTLREEKVKAANTL 788
            T+EE+Q ++         L  E +    E+    N L  IQ  I   +L   ++KA    
Sbjct: 809  TVEEVQKDVDRVTKVIKTLSREQQDFSSEKELKVNALRAIQDEIGRKSLHIGRLKAQ--- 865

Query: 789  RDVKKAEEE-LEHLMEEKGQL-----DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR 842
            +D +K EEE L  +    G L     DLD+ +   A  P  KEK + L  +   +    +
Sbjct: 866  QDKRKMEEEALNDMQNTLGSLRNELQDLDQTVQT-AEAPW-KEKNETLGRFRTERANTEK 923

Query: 843  EYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTD 902
            E   Q     +   E+E   K     + Y     D + +E +   S  + ++        
Sbjct: 924  EASTQVRMYQSSLGEVEGKHKAC---QAYMAEGNDRKIRENEIAMSDIKRQISHSNDDRA 980

Query: 903  EILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE 962
             +  E+      +   + ++ NI  NL YRE   K++   +E++ L+        + +  
Sbjct: 981  ALEAEIFALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELD--------LDSAA 1032

Query: 963  TELGKHLLERDRLLSEVNRCQGTMSVYQTNI-----SRNKIDLK-QAQYKDIDKRHFDQL 1016
                K   E   +L E    QG M++ Q  +     +R K++   +  YK+IDK+H +QL
Sbjct: 1033 ESRAKFNKEYKGMLDEETEAQGLMAITQGGLLEMRANRQKMEKTLKMDYKNIDKQHKEQL 1092

Query: 1017 IQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD 1076
            I+   +E AN DL++Y  ALD A++++H++KM+EIN  I  LW +TY+G DID IRI SD
Sbjct: 1093 IKTTISEYANNDLEKYAKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSD 1152

Query: 1077 SEGAGT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1133
             + A T   +SY+Y+V+M   + EL+MRGRCSAGQKVLAS+IIRLALAE+F   CG+LAL
Sbjct: 1153 HDEASTSTRKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLAL 1212

Query: 1134 DEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVA 1193
            DEPTTNLD  N  +LA +L  I+ +R+ Q NFQLIVITHDE F Q + ++   E Y+RV+
Sbjct: 1213 DEPTTNLDQENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVS 1272

Query: 1194 KDDHQHSIIEAQEI 1207
            +D  Q S++E Q +
Sbjct: 1273 RDASQKSVLERQRV 1286


>gi|224068135|ref|XP_002188800.1| PREDICTED: DNA repair protein RAD50 [Taeniopygia guttata]
          Length = 1312

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 378/1264 (29%), Positives = 651/1264 (51%), Gaps = 137/1264 (10%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +ESV+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLESVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKAVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++   Q+ ++K  + +L+ L+  K+ A ++++ +
Sbjct: 168  EGKALKQKFDEIFSATRYIKALEALRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            S  + +  A K  +  +E  ++ +   +   E  L  + ++ +++  + +R+  + +  Q
Sbjct: 228  SNREAQLAASKENVISIENQLEPLKSSLAVVEQNLTKVMRLDNEVKALESRKRQMEKDNQ 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + E  + TDE+L++   N + IV ++E  +   +R   D+D   K  ++    + 
Sbjct: 288  DLQQKMEEVFQGTDEQLRDRYQNHQKIVKEKEKRLLDCKR---DLDRATKECQR----FN 340

Query: 242  AEITNLLSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRI 294
            +E + LL E G        H   +  RDS IQ L A+  L     APF+     +F   +
Sbjct: 341  SEKSELLIERGRLQLQADRHQEHIVTRDSLIQSLAAQLELDGFEQAPFTERHIASFRRLV 400

Query: 295  RSRLSDLERDLEDKKK-SDELALK--MAWDSYLDANDRWKNIEAQKQAKMEI---KAGIL 348
            + R    +RD E   +   E A K  M      +  D+   +E     K +I   K   L
Sbjct: 401  KDR---QDRDTEAANRMMREFAQKETMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQAEL 457

Query: 349  KHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
            K++K +  + + F  +IS L     DE   KM  E+E+          E  ++  Q+E  
Sbjct: 458  KNVKCELQQLEGFSDRISEL-----DEEIGKMEHELEKAERNSNVETLEQEVQTLQNEKI 512

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + L   +    ++ + K +    + + +K+   + +++  +L G  P
Sbjct: 513  NLDKALRRLDQEMEQLNLHTTTITQMEMLKKDKAEKEDQIRKVKSRHSEELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
              + L+              D L  K+++ ++  + L         NL+K    V+  K 
Sbjct: 572  NKKQLE--------------DWLHGKNKKINQTRDTLA--------NLNKRLASVEYDKT 609

Query: 529  FI-------ESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKS--KYNIADGMRQMFDPF 578
            +        E++L S   ++F +   Q    D  K + +++KS  +  +  G   ++  F
Sbjct: 610  YASNELKKKEAQLSSHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLAGATAVYSQF 669

Query: 579  --ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
              +        CP C+R F  E E  + +   + K   + + +K    E    +    ++
Sbjct: 670  ITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKRKEKKRDEM 729

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQ-AFDDVLGVLAQIKADKESVEVL 694
              L+ +    V+L  + IP           +L  K Q A  D+ G+  +I+  +  ++  
Sbjct: 730  MSLKPLRRTVVELQDKEIP-----------DLRSKIQNANRDLTGLKGEIEEQESLLQTA 778

Query: 695  VQPVETADRLFQEIQL---WQKQVDDLEYML---DSRGQGV---RTMEEIQLE------L 739
            +   E A    Q+I L   +Q  + D+E  +   +++  GV   RT+ ++  E      L
Sbjct: 779  LSEEEGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVNLSRTVHQVSKEKQDKKHL 838

Query: 740  SGSLSTKDNLQNELEKLRDEQ----RYMENDLS--NIQI-----RWHTLREEKVKAANTL 788
              ++++K  L  +L++ +  Q    R   NDL    +QI     R   L E+ V+    +
Sbjct: 839  WDTVTSKIELNQKLKQDQQSQIQQLRSAVNDLKAEKLQIVSSMQRRRQLEEQTVEVTTEV 898

Query: 789  ----RDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREY 844
                R++K+AEE++         L LD KL       L +EKE+L++     +   N+E 
Sbjct: 899  QALCREIKEAEEQV---------LPLDAKL-----DKLQQEKEELVNK----RTASNKET 940

Query: 845  EEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
            +E+     +  ++++ + K   +I+ Y    K++  K+ + +  +  S + +C+ + ++I
Sbjct: 941  QEKMN---SINEKVKDIYKYVKEIENYIQQGKEDYKKQKESELDEVNSRLAACEKQKEKI 997

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
              E++  +  +  Q    R +EDNL  R+   ++ +    I+ L + + ++  V   + E
Sbjct: 998  NKEMEMTRQDIDTQKIRERWLEDNLTLRKRNEELKEVEDNIKQLMKEMGEM-KVPQMKNE 1056

Query: 965  LGKHLLERDRLLSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTE 1023
              KHL E+   L   +    G    ++  I R + +L++ Q+KD ++++ D +I ++TTE
Sbjct: 1057 -QKHLEEKIESLKRNHHVALGRQRGFEEEIVRFRKELREPQFKDAEEKYRDMMIVMRTTE 1115

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT- 1082
            + NKDLD YY ALDKA+M FH+MKMEEINKIIR+LW+  YRGQDI+YI I SD++ + + 
Sbjct: 1116 LVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLWRSIYRGQDIEYIEIRSDADESVSA 1175

Query: 1083 ----RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
                R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFC+NCGILALDEPTT
Sbjct: 1176 TDKRRNYNYRVVMVKGDTALDMRGRCSAGQKVLASLIIRLALAETFCINCGILALDEPTT 1235

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ E +YR+ K+  Q
Sbjct: 1236 NLDRENIESLAHALVEIIKSRLHQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQ 1295

Query: 1199 HSII 1202
             S I
Sbjct: 1296 CSEI 1299


>gi|47219261|emb|CAG11723.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1335

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 359/1268 (28%), Positives = 649/1268 (51%), Gaps = 124/1268 (9%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K++E V+  I    GEKV LS +CADMDRE+ + +GVSK +L +VIF HQ+E+NWPL +
Sbjct: 111  FKSLEQVITRIKD--GEKVSLSSKCADMDREMISSLGVSKPVLNHVIFCHQEESNWPLSE 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK+KFD IF+AT+Y KAL+ +++L   QA  +K  +++L  L+  K+ A ++RE+++
Sbjct: 169  GKALKEKFDAIFAATKYIKALDTMRQLRLKQALAVKECQMELGYLKLNKEKAQQIREAVA 228

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              + +  A +N +Q++E  IQ ++D++   ++ L  + K+ + I  + +R+  + E  ++
Sbjct: 229  TKEAQLMASRNSVQQIENQIQPLEDRLTDIDIKLSKVMKLDNDIKALESRKKQMEEDNKE 288

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
                + +  + +DE+L++  +N +  V ++E  ++  ++E      + + L +       
Sbjct: 289  LEETMEQVFQGSDEQLQDNYHNHQRTVREKERRLTDCQKELEKAGRECQRLNRVKADLLV 348

Query: 243  EITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLE 302
            E   L  EA  H   +  RD+ ++ L +  +L      PFS     +F   +  RL   E
Sbjct: 349  EQGRLQLEADRHAHNIRTRDAQVRSLSSYLDLEGYDRTPFSALQLQSFHRHVTERLEQ-E 407

Query: 303  R----------------------DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK 340
            R                      D+ DKK   E  +++  D         +NI A+ Q  
Sbjct: 408  RQTLAGAMAELQEKEQQKQQAIDDMRDKKTGLERTVELKRDLQGKKQQELRNIRAELQG- 466

Query: 341  MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
            +E  +  L+ + E E  +   ELQ S +  S+++E +N++ +E++R+   L         
Sbjct: 467  LEGSSSRLQEL-ESELAKAERELQ-SAVQGSNVEELKNEV-VELQREKADL--------- 514

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
                      D+  + L++E + L   +  R ++ + K E    + + +KI   + + + 
Sbjct: 515  ----------DRSQRQLDKEMETLNTHTTARTQMDMLKREKTEKEDQVRKIKSRHSEDLV 564

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS--- 517
             +L G  P  R+L+              D + SKS    KE++  + ++ ++  NL+   
Sbjct: 565  SLL-GHFPNKRELE--------------DWIYSKS----KEISATRDRLAKLNKNLASSE 605

Query: 518  KHRKDVDSKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQM 574
            +++    ++ R  E +L S  +  F++   Q +  D +K + D++K     A   G   +
Sbjct: 606  QNKNHTAAELRKKEQQLASDEETFFNVCGNQDLEQDLSKLQEDLEKVSRQRAMLAGATAV 665

Query: 575  FDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSY 631
            +  F  +        CP C+R F  E E  E +   + K     + ++    +    +  
Sbjct: 666  YTQFISQLTEEREPCCPVCQRTFPMESELQEVISGMQSKLRLVPDKLRNTEQDLKRKERK 725

Query: 632  FQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESV 691
               +  LR V +  V+L ++ +P     L  +  E+++     ++   +L  + +++E+ 
Sbjct: 726  RDDMVALRPVRQTIVQLQEKELPELRNRLQTVNREIEKLKSEVEEQESLLVILMSEEETA 785

Query: 692  EVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDN 748
            +  +Q +   DR   +++  ++++      L    QGV   RT++++  E        D 
Sbjct: 786  KACLQDISLMDRYLMDLKEVERKIAQHSAKL----QGVDLSRTVQQVSQEKQEIQHRLDT 841

Query: 749  LQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL 808
              +++E  R   +  ++ +  ++   +  REEK++ ++ ++  ++ E++      E   L
Sbjct: 842  TSSKMELKRKLIQDQQDQIQLLKSAVNETREEKLQLSSNMQKRQQLEDQCVEFTTEIQSL 901

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASK 867
              D +   E   PLS   E+L  +  +L +   R+ +E+ ++KIN   ++ + +  +  +
Sbjct: 902  TRDIREAKEQLSPLSVALERLQQEKQEL-LDRKRQRQEEGQEKINAINEKAKAVSALERE 960

Query: 868  IKEYYDLRKDERFKELQEKKSQ-SESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIE 926
            I +Y +  KDE +KE +E + Q + S++   +   +++  E+   +  +  Q    R ++
Sbjct: 961  ISKYVEEGKDE-YKEQKESELQETNSQLHEAEKHKEKVSKEMGTIRQDIDTQKVQERWLQ 1019

Query: 927  DNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV--NR--C 982
            DNL  R+   ++ +  S+ ++L +   ++G +     +L +   E +R L E+  NR   
Sbjct: 1020 DNLTLRKRVEELKEVVSKRDALRK---EMGNMQVL--QLRQERREVERQLEELKKNRSIA 1074

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
             G    ++  I   + +L++ QY+  D+RH +++I L+TTE+  KDLD YY ALD+ +M+
Sbjct: 1075 VGRQKGFEEEILHYRKELREDQYEKADERHKNKMITLRTTELVIKDLDLYYKALDQTIMK 1134

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQ-----------------------DIDYIRIHSD--- 1076
            FH+MKM+EINKI+R+LW+ TYRGQ                       DI+YI I SD   
Sbjct: 1135 FHSMKMDEINKIVRDLWRSTYRGQGAALRQVTPARLLWTRLMALLPPDIEYIEIRSDLDD 1194

Query: 1077 --SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1134
              S G   R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALD
Sbjct: 1195 NASAGVKRRTYNYRVVMVKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1254

Query: 1135 EPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            EPTTNLD  N  SLA AL  I++ R  Q NFQL+VITHDE F +L+G+  + E +YR+ K
Sbjct: 1255 EPTTNLDRDNIVSLAHALVEIIKSRSRQRNFQLLVITHDEDFVELLGRSSYIEHFYRIRK 1314

Query: 1195 DDHQHSII 1202
            +  Q+S I
Sbjct: 1315 NQDQNSEI 1322


>gi|149726377|ref|XP_001504492.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Equus caballus]
          Length = 1312

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 358/1262 (28%), Positives = 644/1262 (51%), Gaps = 133/1262 (10%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ +   L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESGLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +   H   +  RDS IQ L ++  L      PFS     NF   +R R
Sbjct: 344  SDLLVEQGRLQLQEDRHREHVRARDSLIQSLASQLELDGFERGPFSERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E A  +  D     + + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEREAETASHLMNDYAEKESLKQKQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451  TKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKSSNVEMLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS-----KH 519
            G  P  + L+              D L SKS    KE+N  + ++  +   L+     K+
Sbjct: 568  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLARLNKELASAEQNKN 609

Query: 520  RKDVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFD 576
              +++ K++  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++ 
Sbjct: 610  HINIEIKRK--EEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYS 667

Query: 577  PF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQ 633
             F  +        CP C+R F  E E  E +   + K   + + +K    E    +    
Sbjct: 668  QFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRD 727

Query: 634  QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
            ++  L  V +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V
Sbjct: 728  EMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDVEEQETLLGVIMPEEESAKV 787

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKD 747
             +  V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D
Sbjct: 788  CLTDVSIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD 840

Query: 748  NLQNELEKLRDEQRYMENDLSNIQIR---WHTLREEKVKAANTLRDVKKAEEELEHLMEE 804
             + +++E  R   +++++    IQ      + L+ EK++ +  L+  ++ EE+   L  E
Sbjct: 841  TVSSKIELNR---KFIQDQQEQIQYLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTE 897

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKI 864
               L  + K   E   PL    EK   +  +L  K N   +   ++  + +++++ +   
Sbjct: 898  VQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNSSNKIAQDKMNDIKEKVKNIHNY 957

Query: 865  ASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRN 924
               I+ Y    KD+  K+ +++ ++  +++  C+   ++I  ++   +  +  Q    R 
Sbjct: 958  VKDIENYIQDGKDDYKKQKEDELNKVIAQLSECEKHKEKINTDMRIMRQDIDTQKIQERW 1017

Query: 925  IEDNLNYRE-------------------TKAKVDKFASEIESLEERVLKIGGVSTFETEL 965
            ++DNL  R+                    + +V +  +E + LEE++  +          
Sbjct: 1018 LQDNLTLRKRNEELKEVEEERKHHLKEMGQMQVLQMKNEHQELEEKIDNV---------- 1067

Query: 966  GKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMA 1025
                 +R+  L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ 
Sbjct: 1068 -----KRNHSLA-IGRQKG----YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELV 1117

Query: 1026 NKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGA 1080
            NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S   
Sbjct: 1118 NKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSAAD 1177

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
              R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL
Sbjct: 1178 KRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1237

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            D  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S
Sbjct: 1238 DRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCS 1297

Query: 1201 II 1202
             I
Sbjct: 1298 EI 1299


>gi|302680923|ref|XP_003030143.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8]
 gi|300103834|gb|EFI95240.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8]
          Length = 1297

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 342/1240 (27%), Positives = 634/1240 (51%), Gaps = 88/1240 (7%)

Query: 1    MEYKAIESVLQTIN-PHTGEK-VCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            M  K +ES+L   +    G+K   +S +CA+MD E+P L+GVSK++LENVIF HQ+++ W
Sbjct: 108  MTMKTLESILAVADEAQQGKKRGVISTKCAEMDTEIPQLLGVSKSVLENVIFCHQEDSYW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +PSTLKKKFDDIF AT+YTKAL+ IK L KD+  E+KT K++LE L   K    KL+
Sbjct: 168  PLSEPSTLKKKFDDIFEATKYTKALDSIKSLRKDRVAELKTEKVRLEGLARDKAQYDKLK 227

Query: 119  ESISQDQEKT---EALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRST 175
              IS+  +     EA  +Q++   +++ D + K++         R+    +  +  R+  
Sbjct: 228  ARISELSQTIVAKEAEYDQVKVEYEAMVDANQKLYEQ---ANAFRETYMNVQNLENRKKQ 284

Query: 176  LFEQQQKQYAALAEEIEDTDEELK----NWKNNFEGIVAKRESDISKLEREKNDMDTKIK 231
            L +Q  ++  A  +E E +DEEL+    N + + E    +R ++I+     K D++ ++K
Sbjct: 285  L-KQDIEEAKAEMKEEEGSDEELRERLRNHEKHIEKEKGRRLTEINA----KEDLEEELK 339

Query: 232  FLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI 291
             + +     TA +  L +E  A   R+ +R+  I++L A+H +      P   +  + FI
Sbjct: 340  AMREEQMHDTARLGKLRAEKEAQEQRIRDREQIIRELAAKHGISGFNITPLGADKVVEFI 399

Query: 292  NRI----RSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGI 347
            +R+    R    +L+   +D+ + + L L+   DS        K   A+KQA +      
Sbjct: 400  SRLDDAYRKSKEELDAQTQDEHQKELLELEKKVDSLRTRKSTMKTALAEKQASITRDEAT 459

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
            L  +++          Q++ ++ S I+++  K++    +   Q+    ++  I +K  E 
Sbjct: 460  LDDMQD-------IPAQLATVD-SEIEDKTEKLK----KLREQIRTAAYDKQIEEKAREA 507

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
              +D +    +RE   L+  +E R KL LK+ E+++  K+ +  I+  + K R +++ + 
Sbjct: 508  RLLDDQRNEASREFRFLSSQAEIRAKLQLKRTEVQSKTKEVQATIETSRVKFRKIMQ-KD 566

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
            P+   ++K++ +A     +E + L       DK+       +Q     ++  R++V + K
Sbjct: 567  PVAETMEKDLDKARIERESEQETL-------DKQATNAASVVQNSETAITTMRQEVKTNK 619

Query: 528  RFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHV 587
              I     ++ + +    T +K +  AKE+ + ++ +     G + + + + ++   H  
Sbjct: 620  ERIRVLDRNIKKVLGERPTIEKAIAEAKEEIEFRRKRIEGLKGGKTLLERWLQIGEEHKK 679

Query: 588  CPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK 647
            CP C R     E  EF K  R    ++    K L    +  + + Q+L +L  +  + ++
Sbjct: 680  CPACVRMMDDRELREFEKTMREHIGNA--DPKKLDGTKNEMEEWEQELVELEGLIPQQLE 737

Query: 648  LS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
            L   KE  P  E  +    + L + S   D++   +  ++     V+ L        RL 
Sbjct: 738  LERLKEETPALEAKIKAQEDALPELSAQADEITDKIDLLRKQANEVQALKLQAANITRLQ 797

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYME- 764
            ++++  +++++++E+ L +               +GS  + D+LQ E+EK+ D+ R +E 
Sbjct: 798  KDVERLKEEIEEIEHDLSA---------------TGSTKSTDDLQAEIEKMTDQIRLLER 842

Query: 765  -------------NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD 811
                         N + + +   H+L+  +++  + +  +K  E  +    +   ++ +D
Sbjct: 843  EKNHLTADSNRMNNSVISTERELHSLQTRRMELTSKVEKMKTLETNIAEAKKRIEEIAVD 902

Query: 812  EK----LLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASK 867
            +K     + EA GP+    + L + +  ++ +L    E  +E       + + L  I   
Sbjct: 903  QKDIDVRIREAQGPI----DALNAQWESIRAELRAIIETASEHTRALSLDSDKLNNINKA 958

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            ++ Y   +      E      Q + E+     R +     +++    +      + ++ +
Sbjct: 959  LQSYVKEKSQRILDECSNTVEQRKVEINELSERVEAQRRVIEKIDKEINESGASQASLRE 1018

Query: 928  NLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTM 986
            N+  R+ + ++ +  +EI+ ++ E + +      F+ +      +   L  + +   G +
Sbjct: 1019 NIRVRKMQKEIVEIQTEIDKVDMEEIAR--SRRAFKDQYKPAKEKETELQGQYSHIGGML 1076

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
            +  +  +S  + DL+   +KDI+K++ +QLI++K ++MAN DL++Y  ALD A+M++H++
Sbjct: 1077 TSSREQLSTWEHDLRD--FKDINKKYTEQLIRVKMSDMANNDLEKYAKALDSAIMKYHSL 1134

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCS 1105
            KMEE+N  +R LW +TY+G DID I+I SD EG  + RSY+Y+V+M     E++MRGRCS
Sbjct: 1135 KMEEVNDTMRHLWNKTYQGTDIDGIKIRSDVEGGASKRSYNYRVVMTKDQVEMDMRGRCS 1194

Query: 1106 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF 1165
            AGQK+LAS+IIRLAL+++F  NCGILALDEPT  LD  N ++LA++L  I+ +RK   NF
Sbjct: 1195 AGQKMLASIIIRLALSDSFGQNCGILALDEPTNALDTENIDALASSLVDIINERKNHSNF 1254

Query: 1166 QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
            QLI+ITHDE F + +GQ +  E Y+RV +D  Q SIIE Q
Sbjct: 1255 QLIIITHDENFLRKLGQSEVMEHYWRVVRDSRQKSIIERQ 1294


>gi|355691588|gb|EHH26773.1| hypothetical protein EGK_16836 [Macaca mulatta]
          Length = 1295

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 363/1245 (29%), Positives = 645/1245 (51%), Gaps = 96/1245 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 90   EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 147

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 148  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 207

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 208  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 263

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 264  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 323

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 324  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 381

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L   MA    L    + K I+  +  K      +E+K+ IL   
Sbjct: 382  ----ERQEGEAKTANQL---MAKKETL----KQKQIDEIRDKKTGLGRIIELKSEILNK- 429

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 430  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 485

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 486  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 544

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 545  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 589

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 590  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 649

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 650  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 709

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 710  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 769

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 770  TIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSK 822

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 823  IELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 882

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEY 871
            K   E   PL    EK   +  ++  K N    + A+ K+N  +++++ +      I+ Y
Sbjct: 883  KDAKEQVSPLETTLEKFQQEKEEIINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENY 941

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  
Sbjct: 942  IQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTL 1001

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    
Sbjct: 1002 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG 1057

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1058 YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1117

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1118 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1177

Query: 1104 CSAGQK------VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIME 1157
            CSAGQK      VLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++
Sbjct: 1178 CSAGQKAGAFFQVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIK 1237

Query: 1158 DRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1238 SRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1282


>gi|328871118|gb|EGG19489.1| DNA recombination/repair protein [Dictyostelium fasciculatum]
          Length = 1306

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 358/1260 (28%), Positives = 625/1260 (49%), Gaps = 120/1260 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E++ I+S LQ+ N + G+KV  SYRC+D+D+E+P LMG +K +L+NVIF HQ+E+NWPL 
Sbjct: 110  EFRQIDSSLQSFN-NDGQKVSKSYRCSDLDKEIPELMGAAKPVLKNVIFCHQEESNWPLS 168

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            + + LK KFD+IFSA RYTKAL+ IK   K+   ++K +KLKLE + T ++ A++L + +
Sbjct: 169  ESAKLKVKFDEIFSAVRYTKALKSIKDKKKELNTQLKEFKLKLEVVDTNREHAHRLTKEV 228

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
             Q + +  +LK+ +Q + + +    + +      +K++  +  ++  M AR++ +   + 
Sbjct: 229  KQMENQVVSLKDSIQRMNEQLGQKREIVEKIARAMKNVDSVISEVQVMEARKNEMERNKN 288

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            + Y +L E  E+ DEEL      F+  V +  S   +L   +         L Q  +   
Sbjct: 289  QIYNSLVEVFEEPDEELVFMIKGFDEEVNRMHSAYQELSENQ-------ARLVQEKEQAA 341

Query: 242  AEITNLLSEAGAHMSRMN-------ERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRI 294
             E+  L  E+G   + +        ERD+ I  L  R+++  +     +N +    +  +
Sbjct: 342  REMNRLAVESGQAKASLTTKKKNEQERDAHISDLVKRYHI--INGEDDTNPSIDQLLGLL 399

Query: 295  RSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEK 354
             ++  ++   +E+ +KS++ +L    +   D N++    +  ++   +    I  +  +K
Sbjct: 400  ATKFQEINSMIEEDRKSNQESLSSIQE---DLNNQTGKRQTLRERIHQFSTQIDDN-NQK 455

Query: 355  ENERDSFELQISNLN--LSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQ 412
             N  D     + NLN  L    ++ N ++ E+E+     A    +  I  K  E  +++Q
Sbjct: 456  LNNYDKERTSVINLNKNLEAFAQQSNVLQDEIEQLEQTTANSNNQSLITAKTEEKKSIEQ 515

Query: 413  KIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRD 472
            +++  N E   ++                      H  II       +D+L  +  +D  
Sbjct: 516  QMEISNDEIRKMSS---------------------HATIISRINQLKKDILSKQQLIDSK 554

Query: 473  LKKEITQALRALLTE---------FDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDV 523
            L++   Q L+ +L           F  L    +E D+ +++ Q +  ++ D L++   ++
Sbjct: 555  LQENQVQ-LKQILGSNNQPKVNGLFQQLIKSKKELDESLSIKQEEFDDINDQLNRSENEL 613

Query: 524  DSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKS-------------KYNIADG 570
                R    +L   NQQ+ +I     +LD   E +D+ KS              Y I + 
Sbjct: 614  ----RLYRDELSKKNQQLSTIKPKLSILDQ-DELKDLSKSISILNLKLHKLEKNYAILES 668

Query: 571  MRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADS 630
               ++  +   A     C  CE+  + EE  +FV+K +         ++ +  E +    
Sbjct: 669  EDILYKEYIEKAHDEKECALCEKELN-EELPQFVEKLQQHTHDIPLKLEDIKKEMNQTRK 727

Query: 631  YFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
             ++QL+ ++  Y+ Y++LS+  IP   K   E+ + +         V   L +IK+ +E+
Sbjct: 728  RYEQLEAIKPQYDIYIQLSETEIPQHNKRQEEILKSISSLEPTRQLVTTELNEIKSKREN 787

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVR---------TME-------E 734
               ++   E  D++       QK+  +LE  L S    ++         T+E       +
Sbjct: 788  CNKMLLIAERLDQV-------QKESLELEADLKSTSSQIQNDSLIDQNETLESKMSRYDQ 840

Query: 735  IQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA 794
            +Q E++    + D+L N+ +KL +   Y +  L +++ +    +     +   L  +K++
Sbjct: 841  LQKEIAVLSRSIDDLSNQSKKLAETLMYKKQQLLSLKEKLSNQK----GSEQILERIKQS 896

Query: 795  EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINF 854
            E E  +++ +  +     K   +  G L + K+K + +        NRE     ++K  F
Sbjct: 897  EIETNNIISQLTKNLQSTKQEMKELGSLIEIKQKEMQEKTLENETRNREL---VQEKTIF 953

Query: 855  QQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT-DEILV----ELD 909
            ++++  L  + ++I    D+       EL+ K      E    +I T D+ +      L+
Sbjct: 954  ERKLHQLRSVINQIASAGDV-------ELKHKTIVEAIETIGVQISTVDQDMATGSGHLE 1006

Query: 910  RFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
              K  +  +D+ +R I DNL YR+ K  ++   ++I+  ++    IG + T E       
Sbjct: 1007 AIKSQLSERDKAKRAITDNLQYRQLKLNIETMLNQIQRKKDV---IGSMITAEDAANHKS 1063

Query: 970  LERD--RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
            L  D   L S V++  G++   +        +L +  YK +D+ + D L+Q++T +  NK
Sbjct: 1064 LSADISVLKSRVDQSTGSVEALEQQKRNLTQELNKPVYKTVDEVYRDLLVQIETLDFVNK 1123

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSY 1087
            D+D+YY ALDKALM++HT+KMEEINK IRELWQ TY+G DID I I S+      ++ +Y
Sbjct: 1124 DMDKYYKALDKALMKYHTLKMEEINKTIRELWQSTYKGNDIDTIEIRSEEATGAKKTLNY 1183

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            +V+M  G+ EL+MRGRCSAGQKVLA LIIRLALAE FC +CGILALDEPT++LD  N ES
Sbjct: 1184 RVVMVKGEVELDMRGRCSAGQKVLACLIIRLALAENFCSSCGILALDEPTSHLDRANIES 1243

Query: 1148 LAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             A  L  I+E RK Q  FQLI+ITHDE F Q + +   A+ Y+RV KD +QH+ IE +EI
Sbjct: 1244 FATGLLNIIEARKNQRGFQLIIITHDEEFVQYLSRGNFADYYWRVTKDSNQHTSIEKKEI 1303


>gi|238637251|ref|NP_001154855.1| RAD50 homolog [Xenopus laevis]
 gi|224555762|gb|ACN56470.1| Rad50 [Xenopus laevis]
          Length = 1312

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 358/1235 (28%), Positives = 640/1235 (51%), Gaps = 79/1235 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  I    GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRIKH--GEKVSLSTKCAEMDKEMISALGVSAAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK KFD+IFSATRY KALE +KK+   QA  ++ Y+++++NL+  K+ A ++++++
Sbjct: 168  EGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVREYQVEIKNLKQNKEKAREIQDNL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
               +++    K  ++ +E  ++ + D++   +  L  + ++ ++I  + +R+ T+ +  Q
Sbjct: 228  QSKEKQLAVSKENVKSIESQLEPLKDRLADIQRNLSKVMRLDNEIKALESRKRTMEQDNQ 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + +  + TDEEL     N +  V ++E  ++  +RE +    + + L +      
Sbjct: 288  DLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREMDRACKESQRLNREKGELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             +   L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++      
Sbjct: 348  VQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVK------ 401

Query: 302  ERDLEDKKKSDELALKMAWDSYLDAN--DRWKNIEAQKQAKMEIKAGIL--KHIKEKENE 357
            ER  +D+  ++++  + +    +     D  ++ +   +  +E+K+     KH   K  +
Sbjct: 402  ERQEKDEAHANQILREFSEREAMKQRQLDEMRDKKTGLERTIELKSSTQSKKHTDLKNVK 461

Query: 358  RDSFELQISNLNLSHIDERENKMRIE---VERKTNQLAEREFEINIRQKQSELFAMDQKI 414
             +  +L+ S+  L  +DE   K   E   VE+  N  A R   + ++ ++SEL   D+ +
Sbjct: 462  YELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVLQLQNQKSEL---DRNV 518

Query: 415  KALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
            + L++E + +   +  R ++ + K +  +  ++ +KI   + D++  +L G  P  + L+
Sbjct: 519  RKLDQEMEQMNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDEL-SLLLGYFPNKKQLE 577

Query: 475  KEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL---SKHRKDVDSKKRFIE 531
                          D L SK     K++N  + K+  +T  L    +++  + ++ R  E
Sbjct: 578  --------------DWLYSKR----KDINQTRDKLARLTKELVAAEQNKNHLSNELRRKE 619

Query: 532  SKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARAHH 586
             +  S  +++F +   Q    D ++ + D++K+    A   G   ++  F          
Sbjct: 620  EQSASFEEKVFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQP 679

Query: 587  VCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEY 645
             CP C+R F +E E  + +   + K     + +K    E    +     + +L+ + +  
Sbjct: 680  CCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKSAEGELKRKEKRKDDMMELKPMRQML 739

Query: 646  VKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
              L ++ IP     L  +  E+ +     D+   ++A   +++ES +  +Q +   +R  
Sbjct: 740  ADLKEKEIPEIRNKLVTINREIQRLKNDVDEQETLIATFASEEESAKACLQDISLMER-- 797

Query: 706  QEIQLWQKQVDDLEYML---DSRGQGVR---TMEEIQLELSGSLSTKDNLQNELEKLRDE 759
                 +Q ++ D+E  +    ++ QGV    T++++  E        DN+  ++E LR  
Sbjct: 798  -----YQMELRDVERKIAQYATKLQGVDLNCTVQQVSQEKQEKQHNLDNVSGKIELLRKR 852

Query: 760  QRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEAS 819
             +  +  +  ++   + L  EK+  ++ L+  ++ EE+   L  E   L  + K   E  
Sbjct: 853  IQDQQEQVQQLKSAVNELTAEKLHISSNLQRRQQLEEQNVELTTELQCLAREIKEAREQL 912

Query: 820  GPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDER 879
             PL    +KL  +  +L  +    Y E A++K+N  +E    + + +K  E Y     E 
Sbjct: 913  FPLESTLQKLQQEKQELLQRKESSYRE-AQEKVNDIKEKVKKINLLTKDIEKYSQDGKEE 971

Query: 880  FKELQEKKSQSE-SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            FKE +E + Q     +  C+   +++  E+   +  +  Q    R ++DNL  R      
Sbjct: 972  FKEQKESELQELIGRLNECEKLKEKVNREMVTIRQDIDTQKIQERCLQDNLTLR------ 1025

Query: 939  DKFASEIESLEE---RVLKIGG---VSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN 992
             K   E++ +EE   ++LK  G   V   + E  +   + + L +  +   G    ++  
Sbjct: 1026 -KRIEELKRVEEERHQLLKEMGQMKVVQMKNEYQELENKSESLKTNHSLALGRQKGFEDE 1084

Query: 993  ISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEIN 1052
            I R K +L+ +QYK+ ++++ +++I ++TTE+A KDLD YY  LD+A+M++H++KMEEIN
Sbjct: 1085 ILRFKKELEGSQYKEAEEKYREKMIVMRTTELAIKDLDIYYKTLDQAIMKYHSIKMEEIN 1144

Query: 1053 KIIRELWQQTYRGQDIDYIRIHSDSEGAGT-----RSYSYKVLMQTGDAELEMRGRCSAG 1107
            KI+R+LW+ TYR QDI+YI I SD++ + T     R+Y+Y+V+M  GD  L+MRGRCSAG
Sbjct: 1145 KIVRDLWRSTYRSQDIEYIEIQSDADESVTAADKRRTYNYRVVMIKGDTALDMRGRCSAG 1204

Query: 1108 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQL 1167
            QKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQL 1264

Query: 1168 IVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            IVITHDE F +L+G+ ++ E +YR+ K+  Q S I
Sbjct: 1265 IVITHDEDFVELLGRSEYVEHFYRIKKNIDQCSEI 1299


>gi|449269182|gb|EMC79984.1| DNA repair protein RAD50 [Columba livia]
          Length = 1314

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 367/1258 (29%), Positives = 644/1258 (51%), Gaps = 123/1258 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEK  LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKASLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KAL+ ++++   Q+ ++K  + +L+ L+  K+ A +++  +
Sbjct: 168  EGKALKQKFDEIFSATRYIKALDTLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            S  + +  A K+ ++ +E  ++ +   +   E  L    ++ + +  + +RR  + +  +
Sbjct: 228  SNREAQLAASKDNVKSIESQLEPLKSSLAAVEQNLVKAMRLDNDVKALESRRRQMEKDNE 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + +  + TDE+L++   N +  V ++E  +S  +RE   +D   K  ++    + 
Sbjct: 288  DLQQKMKKVFQGTDEQLRDRYQNHQRTVNEKEKRLSDCKRE---LDRATKECQR----FN 340

Query: 242  AEITNLLSEAGA-------HMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRI 294
            +E + LL E G        H   +  RDS IQ L A+  L     AP +     +F   +
Sbjct: 341  SEKSELLIERGRLQLQADRHQEHITTRDSLIQSLAAQLELDGFERAPLNERHVASFHVLL 400

Query: 295  RSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKM-EI---KAGILKH 350
            + R    ERD E    ++ L  + A              EA KQ ++ EI   K G+ + 
Sbjct: 401  KERQ---ERDAE---AANHLMREFARK------------EAMKQKQIDEIRDKKTGLERT 442

Query: 351  IKEKENERDSFELQISNL-----NLSHIDERENKMRIEVERKTNQL--AER-----EFEI 398
            I  K + ++  ++++ N+      L    +R  ++  E+ +  ++L  AER     + E+
Sbjct: 443  IDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQEIVKTEHELEKAERNSNVEKLEL 502

Query: 399  NIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDK 458
             +R  Q+E   +D+ ++ L++E + L   +    ++ + K +  + +++ +KI   + D+
Sbjct: 503  EVRTLQNEKINLDKTLRKLDQEMEQLNLHTATITQMEILKKDKADKEEQIRKIKSRHSDE 562

Query: 459  IRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSK 518
            +  +L G  P    L+              D L SK++           KI +  DNL K
Sbjct: 563  LTSLL-GYFPNKNQLE--------------DWLHSKNK-----------KINQTRDNLGK 596

Query: 519  HRKDV----------DSKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKS--KY 565
              K +           S+ R  E +L     QIF +   Q    D  K + +++KS  + 
Sbjct: 597  LNKRLASVEYDKSHASSELRRKEEQLSLHEAQIFDVCGSQDFDSDLNKLQDEIEKSSKQR 656

Query: 566  NIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLS 622
             +  G   ++  F  +        CP C+R F  E E  + +   + K   + + +K   
Sbjct: 657  AVLAGATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTE 716

Query: 623  LESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
             E    +    ++  L+ + +  V+L    IP     +            A  D++ +  
Sbjct: 717  SELKRKELKRDEMMSLKPLRQTVVELQNTDIPGLRNKIQ----------NANRDLVSLKG 766

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQL---WQKQVDDLEYML---DSRGQGV---RTME 733
            +I+  +  ++  +   E A    Q+I L   +Q  + D E  +   +++  GV   R++ 
Sbjct: 767  EIEEQESQLQAALSEEEGAKACLQDITLMERYQADIRDCERKIAQQEAKLLGVDLSRSVL 826

Query: 734  EIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
            ++  E        D +  ++E  +  ++  +  +  ++   + L+ E+++ +++++  ++
Sbjct: 827  QVSQEKQEKKHLWDTVTGKIELNQKLKQDQQTQIQQLKSAVNELKAERLQISSSMQRRRQ 886

Query: 794  AEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN 853
             EE+   L  E   L  + K   E + PL    EKL  +  DL  K     +E  E+   
Sbjct: 887  LEEQTVELTTEVQSLCREIKEAQEQAFPLDATLEKLQQEKEDLMNKRTTSNKEAQEKISV 946

Query: 854  FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKD 913
             +++++ + K   +I+ Y   RKD+  K+ + +  + +S++ +C+ + ++I  E++  + 
Sbjct: 947  IKEKVKDINKYVKEIENYIQQRKDDYKKQKEAELEEVKSQLAACEKQKEKISKEMETIRQ 1006

Query: 914  IVRNQ--DQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLE 971
             +  Q  D   R +EDNL  R+    + +    I+ L   V ++G +   + +  +  LE
Sbjct: 1007 DIDTQKVDIQERWLEDNLTLRKRNEDLKEVEDNIKQL---VKEMGEMKVPQMKNEQKRLE 1063

Query: 972  R--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
               + L    +   G    ++  I R K +L+++Q++D D+++ + +I ++TTE+ NKDL
Sbjct: 1064 EKIESLKRNHDVALGRQRGFEEEIVRFKKELRESQFRDADEKYREMMIVMRTTELVNKDL 1123

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRS 1084
            D YY ALDKA+M FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     RS
Sbjct: 1124 DLYYKALDKAIMTFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRS 1183

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N
Sbjct: 1184 YNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDREN 1243

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ E +YR+ K+ +Q S I
Sbjct: 1244 IESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIYQCSEI 1301


>gi|417413722|gb|JAA53175.1| Putative dna repair protein rad50 abc-type atpase/smc superfamily,
            partial [Desmodus rotundus]
          Length = 1269

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 360/1238 (29%), Positives = 635/1238 (51%), Gaps = 85/1238 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 67   EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 124

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q+++  + +L+ L+  K+ A ++R+ I
Sbjct: 125  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVRECQTELKYLKQNKEEACEIRDQI 184

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R++ + +   
Sbjct: 185  TSKEAQLTSSKEIVRSYESELDPLKNRLREIEQNLSKIMKLDNEIKALESRKTQMEKDNS 244

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +    + +  + TDE+L +  +N +  V ++E  +   +R    ++ + + L Q      
Sbjct: 245  ELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLIDCQRVLEKLNKESRLLNQEKSELL 304

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R    
Sbjct: 305  VEQGRLQLQADRHQENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHRLVRER---- 360

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
                  ++K +E A ++  D       + + I+  +  K  I  G +  +K +   +   
Sbjct: 361  ------QEKEEETASQLMSDFAEKETLKQRQIDEIRDKK--IGLGRIIELKSEILSKKQS 412

Query: 362  ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREK 421
            EL+     L  ++   +++ +E++R   +L + E E+N  +K S + A+  ++ +L  EK
Sbjct: 413  ELKNVKCELQQLEGSSDRI-LELDR---ELTKAEHELNKAEKNSNVEALKTEVTSLQNEK 468

Query: 422  DVLAGDSEDRV--KLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRD-----LK 474
              L     DR+  KL  +  +L +H     ++    KDK           D+D     +K
Sbjct: 469  ADL-----DRIVRKLDQEMEQLNHHTTTRAQLEMLTKDKA----------DKDEQIRKIK 513

Query: 475  KEITQALRALLTEF-------DDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
               +  L +LL  F       D L SKS+E ++  + L  K+ +   +  +++  ++++ 
Sbjct: 514  SRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNEL 572

Query: 528  RFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVA 582
            +  E +L +   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +   
Sbjct: 573  KRKEEQLSNYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTD 632

Query: 583  RAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV 641
                 CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  +
Sbjct: 633  ENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPM 692

Query: 642  YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETA 701
             +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V   
Sbjct: 693  RQGIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIMPEEESAKVCLTDVTIM 752

Query: 702  DRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEK 755
            +R       +Q ++ D+E  +  +    QGV   RT++++  E        D + +++E 
Sbjct: 753  ER-------FQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLDTVSSKIEL 805

Query: 756  LRDEQRYMENDLSNIQ-IRWHT--LREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
             R   +++++    IQ +R  T  L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 806  NR---KFIQDQQEQIQHLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 862

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL    +K   +  +L  K N   +   ++  + +++++ +      I+ Y 
Sbjct: 863  KDAKEQISPLETTLDKFQQEKEELICKKNTSIKIIQDKISDIKEKVKNIHGYMKNIENYI 922

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
               KD+  K+ + + ++  +++   +   ++I  E+   +  +  Q    R ++DNL  R
Sbjct: 923  QDGKDDYKKQKETELNKVIAQLSESEKHHEKIHKEMGTMRQDIDTQKIQERWLQDNLTLR 982

Query: 933  ETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVY 989
                K ++   E+E   +R LK +G +   + +     LE   D +    +   G    Y
Sbjct: 983  ----KRNEELKEVEEERKRHLKEMGQMQVLQMKNEHQNLEEKIDNIKRNHSLAIGRQKGY 1038

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            +  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKME
Sbjct: 1039 EDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKME 1098

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRC 1104
            EINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRC
Sbjct: 1099 EINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRGRC 1158

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q N
Sbjct: 1159 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLALALVEIIKSRSQQRN 1218

Query: 1165 FQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            FQL+VITHDE F +L+G+ ++ E +YRV K+  Q S I
Sbjct: 1219 FQLLVITHDEDFVELLGRSKYVETFYRVKKNVDQCSEI 1256


>gi|281183185|ref|NP_001162505.1| DNA repair protein RAD50 [Papio anubis]
 gi|297295039|ref|XP_001099384.2| PREDICTED: DNA repair protein RAD50-like [Macaca mulatta]
 gi|159461525|gb|ABW96800.1| RAD50 homolog, isoform 1 (predicted) [Papio anubis]
          Length = 1311

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 360/1239 (29%), Positives = 642/1239 (51%), Gaps = 88/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284  KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVK-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILNK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453  KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  IELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEY 871
            K   E   PL    EK   +  ++  K N    + A+ K+N  +++++ +      I+ Y
Sbjct: 906  KDAKEQVSPLETTLEKFQQEKEEIINKKNTS-NKIAQDKLNDIKEKVKNIHGYMKDIENY 964

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
                KD+  K+ + + ++  +++  C+   ++I  ++   +  +  Q    R ++DNL  
Sbjct: 965  IQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTL 1024

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    
Sbjct: 1025 R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQK  ASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKA-ASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1259

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1260 NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1298


>gi|395817602|ref|XP_003782255.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Otolemur garnettii]
          Length = 1312

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 349/1239 (28%), Positives = 639/1239 (51%), Gaps = 87/1239 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GE+V LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYL------DANDRWKNIEAQKQAKMEIKAGILKHI 351
                ER  ++ + +++L    A    L      +  D+   +    + K+EI++      
Sbjct: 402  ----ERQEKEAETANQLMNDFAEKEALKQKQIDEIRDKKTGLGRIIELKLEIQSK----- 452

Query: 352  KEKENERDSFELQ---ISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
            K+ E +   +ELQ    S+  +  +D+   K   E+ +          ++ +   Q+E  
Sbjct: 453  KQHELKNAKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVEALKMEVISLQNEKV 512

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + +   +  R ++ +   +  +  ++ +KI   + D++  +L G  P
Sbjct: 513  DLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
              + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++ +
Sbjct: 572  NKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNELK 616

Query: 529  FIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVAR 583
              E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +    
Sbjct: 617  KKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLADE 676

Query: 584  AHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVY 642
                CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  + 
Sbjct: 677  NQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMR 736

Query: 643  EEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETAD 702
            +  + L ++ IP     L  +  ++ +     ++   +L  +  ++ES +V +  V   +
Sbjct: 737  QSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIME 796

Query: 703  RLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEKL 756
            R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E  
Sbjct: 797  R-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELN 849

Query: 757  RDEQRYMENDLSNIQIRWHT---LREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEK 813
            R   + +++    IQ+   T   L+ EK++ ++ L+  ++ EE+   L  E   L  + K
Sbjct: 850  R---KLIQDQQEQIQLLKSTTNELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIK 906

Query: 814  LLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYY 872
               E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I+ Y 
Sbjct: 907  DAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYVKDIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            +  K++  K+ + + ++  +++  C+   ++I  E+   +  +  Q    R ++DNL  R
Sbjct: 966  EDGKEDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLR 1025

Query: 933  ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQ----GTMSV 988
            +   ++ +        ++ + ++G +   + +     LE +  +  + R      G    
Sbjct: 1026 KRNEELKEVEE---ERKQHLKEMGQMQVLQMKNEHQKLEEN--IENIKRNHSLALGRQKG 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q 
Sbjct: 1201 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR 1260

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1261 NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1299


>gi|432109532|gb|ELK33706.1| DNA repair protein RAD50 [Myotis davidii]
          Length = 1331

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 366/1267 (28%), Positives = 650/1267 (51%), Gaps = 124/1267 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+  I    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVITRIKH--GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++RE I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIREQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +   N +  + ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYLNHQRTIREKERKLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L ++  L    + PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQQQADRHQENIRARDSLIQSLASQLELDGFEHGPFSERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      ++K +E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEKEEETASQLMNDFAEKETLKQKQIDEIRDKKIGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R +++  E+ +  ++L++ E   N+   ++E+ +  
Sbjct: 451  SKKQNELKNVKSELQQLEGS--SDRIHELDQELTKAEHELSKAEKNSNVETLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKSRHSDELNSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P    L+              D L SKSRE ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKNQLE--------------DWLHSKSREINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--E 579
             + +  E +L S   ++F +   Q    D  + K +++KS    A   G   ++  F  +
Sbjct: 613  IELKRKEEQLSSYEDKLFDVCGSQDFESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                +   CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDESQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  +  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNE 752
               +R       +Q ++ D+E  +  +    QG+   RT++++  E        D + ++
Sbjct: 793  TIMER-------FQMELKDVERKIAQQAAKLQGLDLDRTLQQVNQEKQEKQHKLDTVSSK 845

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            +E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + 
Sbjct: 846  IELNRKLIQDQQEQIQHLRGVTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREI 905

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            K   E   PL    EK   +  +L  K N  +    ++  + +++++ +      I+ Y 
Sbjct: 906  KDAKEQISPLEITLEKFQQEKEELIFKKNTSHRITQDKMNDIKEKVKNIHGYVKNIENYI 965

Query: 873  DLRKDERFK----ELQEKKSQ-SESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
               KD+  K    EL +  +Q SESE    KI TD  ++  D     +  Q    R ++D
Sbjct: 966  QDGKDDYKKQKETELNKVIAQLSESEKHKEKINTDMGIMRQD-----IDTQKIQERWLQD 1020

Query: 928  NLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETE-----LGKHL--LERDRLLSEV 979
            NL  R    K ++   E+E   ++ LK +G +   + +     LG+ +  ++R   L+ +
Sbjct: 1021 NLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQLKNEHQNLGEKIENIKRSHSLA-I 1075

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
             R +G    Y+  I   K +L+  Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A
Sbjct: 1076 GRQKG----YEEEIIHFKKELRSPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQA 1131

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTG 1094
            +M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  G
Sbjct: 1132 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKG 1191

Query: 1095 DAELEMRGRCSAGQK-------------------VLASLIIRLALAETFCLNCGILALDE 1135
            D  L+MRGRCSAGQK                   VLASLIIRLALAETFCLNCGILALDE
Sbjct: 1192 DTALDMRGRCSAGQKAGTQNLGATFTQRIDRETNVLASLIIRLALAETFCLNCGILALDE 1251

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA +L  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+
Sbjct: 1252 PTTNLDRENIESLAHSLVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKN 1311

Query: 1196 DHQHSII 1202
              Q S I
Sbjct: 1312 IDQCSEI 1318


>gi|344266003|ref|XP_003405070.1| PREDICTED: DNA repair protein RAD50 [Loxodonta africana]
          Length = 1312

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 360/1253 (28%), Positives = 645/1253 (51%), Gaps = 115/1253 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +   N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYRNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  +   +  RDS I+ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRYQEHIRARDSLIRSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                ER   + + +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402  ----ERQEGEAETANQLMNDFAEKEAL----KQKQIDEIRDKKIGLGRIIELKSEILSK- 452

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            K+ E +   +ELQ     L    +R  ++  E+ +   +L++ E   ++   ++E+ +  
Sbjct: 453  KQSELKNVKYELQ----QLEGSSDRILELEQELTKAERELSKAEKNSSVEALKTEVMSLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLSKDKADKDEQIRKIKSRHGDELTSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  ++
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHIN 612

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIA--DGMRQMFDPF- 578
            ++ +  E +L S   ++F +   Q     LD  KE  D++KS    A   G   ++  F 
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKE--DIEKSSKQRAMLAGATAVYSQFI 670

Query: 579  -ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLD 636
             +        CP C+R F  E E  E +   + K   + + +K    E    +     + 
Sbjct: 671  TQLTDENQSCCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDDML 730

Query: 637  KLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQ 696
             L  + +  V L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V + 
Sbjct: 731  GLVPMRQSIVDLREKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 790

Query: 697  PVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNEL 753
             V   +RL  E++  ++++      L    QG+   RT++++  +        D + +++
Sbjct: 791  DVTIMERLQMELKDVERKIAQQAAKL----QGIDLDRTVQQVNQDKQEKQHKLDTVSSKI 846

Query: 754  EKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEK 813
            E  R   +  +  +  ++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K
Sbjct: 847  ELNRKLIQDQQEQVQQLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIK 906

Query: 814  LLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD 873
               E   PL    EK   +  +L  K N+  +   ++  + +++++ +      I+ Y  
Sbjct: 907  DAKEQVSPLETTLEKFQQEKEELINKKNKSNKIIQDKLNDIKEKVKNIQSYVKDIENYIQ 966

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              KD+  K+ + + ++  +++  C+ + ++I  E+   +  +  Q    R ++DNL  R+
Sbjct: 967  DGKDDYKKQKETELNKVITQLSECEKQKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRK 1026

Query: 934  -------------------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDR 974
                                + +V +  +E + LEE++         ET      ++R+ 
Sbjct: 1027 RNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKI---------ET------IKRNH 1071

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
             L+ + R +G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY 
Sbjct: 1072 SLA-LGRQKG----YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYK 1126

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKV 1089
             LD+A+M+FH+MKMEEINKIIRELW+ TYRGQDI+YI I SD     S     R+Y+Y+V
Sbjct: 1127 TLDQAIMKFHSMKMEEINKIIRELWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRV 1186

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
            +M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA
Sbjct: 1187 VMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLA 1246

Query: 1150 AALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1247 HALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYMEKFYRIKKNMDQCSEI 1299


>gi|388851655|emb|CCF54651.1| probable RAD50-DNA repair protein [Ustilago hordei]
          Length = 1309

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 354/1249 (28%), Positives = 635/1249 (50%), Gaps = 92/1249 (7%)

Query: 1    MEYKAIESVLQTIN--PHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +LQ  +    TG++  LS +C+++D E+P L+GVSK+ILENVIF HQ+++NW
Sbjct: 108  LTMKTLEGLLQIADEDAKTGKRGTLSTKCSELDEEIPRLLGVSKSILENVIFCHQEDSNW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P++LKKKFDDIF ATRYTKAL+ IK L KD+  ++K  K  LE L+  KD A  ++
Sbjct: 168  PLSEPASLKKKFDDIFEATRYTKALDNIKTLRKDRTNQLKVDKAALEGLKVDKDRADTIK 227

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
              ++        L+  + + E  ++D++++I    +          +   + +R  TL E
Sbjct: 228  TKLTH-------LQADLAQKEAKLEDLNEEIRIKTVQNSKFYDEATRFREIVSRAETLEE 280

Query: 179  QQQ------KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            +++      +   A    I+DTDEEL+  K +F   + + +S I+ L++   + + +++ 
Sbjct: 281  KERLHKENMEALQATMTPIKDTDEELQKRKQSFRSHLDQAQSKINSLKKRTAEKEDELET 340

Query: 233  LEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
             EQ      +E   L +E  AH+    +R+++I+++     +        ++    +F +
Sbjct: 341  NEQRHRKKLSEKGGLEAEKRAHVQAKEKREASIKQIANELGIKGFGGEDLTDTQIRSFED 400

Query: 293  RIRSRLSDLERDLE-----DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGI 347
            R++  +  L+ +       + KK DEL               W+N+ A+ +AK   +  +
Sbjct: 401  RVKEEVRKLDDEFARLRETNSKKDDELTTA------------WQNLRAELRAKQNAREQL 448

Query: 348  LKHI-------KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
               +       K  +++ D + L  SN ++   +   + +  +V     ++ E +++  I
Sbjct: 449  TDSVRKLKDKVKRAQDDLDGYAL--SNADIEAAERDRDNLSAKVAAAQKEVEEAKYDEQI 506

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
            R+K +E+   D+  +    E ++L   +E R  L LK  +    +   + + D +K  + 
Sbjct: 507  RKKNAEIREKDELREERTSEINLLNRHAELRASLGLKMQQATTRRNNAQGLFDRHKSSLS 566

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
            D +   + L RD++ E+ + L        +L + + + ++E       +Q+V   +S  R
Sbjct: 567  DRICTDMEL-RDVENEVVRVLTKHEKRLGELEAVNSDKNRE-------LQQVESAISFAR 618

Query: 521  KDVDSKKRFIESKLESLNQQIFS--IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF 578
            K + SK+  + ++L+     I S   D  ++ +    E+    K +Y   D +       
Sbjct: 619  KQIKSKQE-VAAELQQTVSSILSPDFDDAEEAVKICAEEIAAAKDEYASIDSLDSFLRRV 677

Query: 579  ERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
             R A+    C  C R  +  E +   K      +SS    K  +L++ + D + ++  + 
Sbjct: 678  LREAKGKGHCFACNRGVTPSEYEAIEKHVNTTLSSSNTTEKKKTLKA-DIDGWSERSAEC 736

Query: 639  RM-VYEEYVKLSKETIPVAE--KNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
            ++ + ++  + + E + + +    +     EL + ++A +     +A+++ + + ++ L 
Sbjct: 737  QIALAKDAQRKAIEEVEIVDLRNTISSKEAELKEAAEAAETSSAEVAKMQTELKELQSLR 796

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLE---LSGSLSTKDNLQNE 752
            +      RL  E      +V  L+  L + G   +T E++Q E   L+ S+       N 
Sbjct: 797  RVGNDIARLLSEASDLDSEVQSLQSDLATTG-STQTGEQVQAEIDQLAASIKVLKRELNV 855

Query: 753  LEKLRDEQRYM----ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL 808
            L++ R+ +R +    E D    ++   T R+E  K A+    +++   +LE   +    L
Sbjct: 856  LQQDRETKRTLINSFERDAHRAEVTVITKRQEYAKKASIEEQLQEMNADLEEQQKRIKSL 915

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQ-QEIEMLLK---- 863
            D +   +  +S P+ + K+ L S     K + ++     AE K+  +  ++E+  K    
Sbjct: 916  DAE---IESSSTPIRRAKDGLES----FKAEASK-----AENKLRARVDKLEVWAKQIRE 963

Query: 864  IASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRR 923
            + + +  Y   R  +R +E +E   +   +++       E+  ++   +  V       R
Sbjct: 964  LNAAVNAYIQQRGTQRLEECEEAIQELVEKIQGIHRDVKELTDKITELQKEVNQSQATER 1023

Query: 924  NIEDNLNYRETKAKVDKFASEIESLE----ERVLKIGGVSTFETELGKHLLERDRLLSEV 979
            NI DN+ YR+    V +   EI SL+    +R  K      F  +  +   E +RL  E 
Sbjct: 1024 NILDNIRYRQLAKDVLQIEEEINSLDLEQAQRSRK-----HFADKYTEAKEEENRLNGEA 1078

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
            +   G ++  ++ I   +++L+  ++K + + +  +LI++KT+EMAN DL++Y  AL+ A
Sbjct: 1079 SHLSGELASLRSQIKGRELELRD-EFKGVHQNYKRKLIEVKTSEMANNDLEKYAKALENA 1137

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            +MR+H +KMEEIN IIR LWQ+TY+G DID I I SD+EGA G RSY+Y+V M     E+
Sbjct: 1138 IMRYHAIKMEEINDIIRYLWQKTYQGTDIDTILIKSDNEGARGNRSYNYRVCMVKDTVEM 1197

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLAS+IIRLALAE+F  NCGILALDEPTTNLD  N E+LA +L  ++++
Sbjct: 1198 DMRGRCSAGQKVLASIIIRLALAESFGSNCGILALDEPTTNLDKDNIEALARSLADLIKE 1257

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            R      QLIVITHDE F  L+GQ    E Y+RV++D HQ SIIE + I
Sbjct: 1258 RAENSQLQLIVITHDEEFLTLLGQNDVLEYYWRVSRDVHQKSIIERERI 1306


>gi|348518948|ref|XP_003446993.1| PREDICTED: DNA repair protein RAD50-like [Oreochromis niloticus]
          Length = 1312

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 343/1227 (27%), Positives = 642/1227 (52%), Gaps = 65/1227 (5%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K++E V+       GEKV LS +C ++DRE+ + +GVSK +L +VIF HQ+E+NWPL +
Sbjct: 111  FKSLEQVI--TRWKDGEKVSLSSKCGELDREMISSLGVSKPVLNHVIFCHQEESNWPLSE 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK KFD IF+AT+Y KALE +++L   Q+Q +K  +++L  L+  K+ A ++RE++ 
Sbjct: 169  GKALKDKFDSIFAATKYIKALETMRQLRLKQSQIVKECQVELRYLKQNKEKAQQIRETVD 228

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              + +  A K+ +Q++E  I+ +++++   +L L  + K+ ++I  + +R+  + E  ++
Sbjct: 229  TKEAQLMASKDSVQQIENQIEPLENRLMDIDLKLGKVMKLDNEIKALDSRKKQMEEDNKE 288

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
                + +  + +DEEL+    N +  V ++E  +++ ++E      + + L +       
Sbjct: 289  LEETMEQVFQGSDEELQEIYQNHQRTVREKERRLTECQKELERAGRECQRLNRIKAELLV 348

Query: 243  EITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLE 302
            E   L  EA  H   +  RD+ ++ L     +      PF+     +F   +  RL   +
Sbjct: 349  EQGRLQLEADRHTQNIRNRDTQVRSLSTYLEMEGYDRPPFTALQLESFHRHVTQRLEQEK 408

Query: 303  RDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFE 362
              L     + +   +    S  +  D+   +E   + K +++       K++E      E
Sbjct: 409  GTLSQVMVNLQEKEQQKQQSIDEMRDKKTGLERTVELKRDMQGK-----KQQELRSVRAE 463

Query: 363  LQISNLNLSHIDERENKMRIEVERKTNQLAER----EFEINIRQKQSELFAMDQKIKALN 418
            LQ    + + + E EN++  +VER+     +     + +  + + Q E   +D+K + L+
Sbjct: 464  LQRLEGSSTRLQELENEL-AKVERELQSAIQNSNVEQLKAEVSELQREKAELDRKQRKLD 522

Query: 419  REKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEIT 478
            +E + L      R ++ + K +    +++ +KI   + + +  +L G+ P  R L+    
Sbjct: 523  QEMETLNTHMTSRTQMDMLKKDKGEKEEQVRKIKSRHSEDLVPLL-GQFPNKRVLE---- 577

Query: 479  QALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLE 535
                      D + SKS    KE+N  + ++ ++  +L+   +++  + ++ R  E +L 
Sbjct: 578  ----------DWIYSKS----KEINSTRNRLAKLNKDLASSEQNKSHISAELRKKEQQLT 623

Query: 536  SLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARAHHVCPC 590
            S  ++ F++   Q +  D +K + D++K     A   G   ++  F  +        CP 
Sbjct: 624  SDEEKFFNVCGSQDLDQDLSKLQEDLEKMSKQRAMLAGATAVYTQFISQLTEDREPCCPV 683

Query: 591  CERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS 649
            C+R F +E +  E +   + K     + +K    +    +    ++  L+ V +  V+L 
Sbjct: 684  CQRTFPSESDLQEVINDMQSKLRLVPDKLKNTEQDLKRKERKKDEMMALKPVRQSIVQLQ 743

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQ 709
            ++ +P  +  L  +  E+++     ++   +LA + +++E+ +  +  +   DR     Q
Sbjct: 744  EKELPELKNRLQTVNREIERLKGDVEEQETLLATLMSEEETAKACLPDISLLDRY----Q 799

Query: 710  LWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            +  K+V+       ++ QGV   RT +++  E   +    D   +++E  R   +  +  
Sbjct: 800  MDLKEVERKIAQHAAKLQGVDLTRTTQQVSQEKQETQHKLDTTSSKMELKRKLIQDQQEQ 859

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            +  ++   +  R EK++ ++ ++  ++ EE+      E   L  D +   E   PLS   
Sbjct: 860  IQTLRSAVNETRAEKLQLSSDMQKQQQLEEQCAEFTTEIQSLTRDIREAKEQLSPLSAAL 919

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQE 885
            EKL  +  +L ++  R+ +E+ ++KI+  ++ ++ +  +   I +Y D  KDE +KE +E
Sbjct: 920  EKLQQEKQEL-LERKRQKQEEGQEKISSIKERLKAITTLERDITKYVDEGKDE-YKEQKE 977

Query: 886  KK-SQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASE 944
             +  ++ +++   +   ++I  E+   +  +  Q    R ++DNL  R+   ++ +   +
Sbjct: 978  SELHETNTQLHEAEKHKEKINKEIGNIRQDIDTQKVQERWLQDNLTLRKRVEELKEVVGK 1037

Query: 945  IESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQ----GTMSVYQTNISRNKIDL 1000
             E+L   +  +G +   +  L +   E +R L ++ R +    G    ++  I   + +L
Sbjct: 1038 REAL---MKDMGNMQVMQ--LRQERREAERKLEDLKRNRSIALGRQKGFEDEILHYRKEL 1092

Query: 1001 KQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQ 1060
            ++ QY   D+R+ +++I ++TTE+  KDLD YY ALD+ +M+FH+MKM+EINKIIR+LW+
Sbjct: 1093 REDQYDKADERYRNKMITMRTTELVIKDLDLYYKALDQTIMKFHSMKMDEINKIIRDLWR 1152

Query: 1061 QTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLI 1115
             TYRGQDI+Y+ I SD     S G   R Y+Y+V+M  GD  L+MRGRCSAGQKVLASLI
Sbjct: 1153 STYRGQDIEYVEIRSDVDENSSAGVRRRVYNYRVVMVKGDTALDMRGRCSAGQKVLASLI 1212

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL++ITHDE 
Sbjct: 1213 IRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLLIITHDED 1272

Query: 1176 FAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            F +L+G+  + E +YR+ K+  Q+S I
Sbjct: 1273 FVELLGRSSYIEHFYRIRKNQDQNSEI 1299


>gi|126290113|ref|XP_001366194.1| PREDICTED: DNA repair protein RAD50 [Monodelphis domestica]
          Length = 1312

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 381/1276 (29%), Positives = 651/1276 (51%), Gaps = 161/1276 (12%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++ +  DQ+  +K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRSVRHDQSVRVKECQTELKYLKQNKEKALEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
               + +  + K  ++  E  +  +   +   E  L  + ++ + I  + +R+    +Q +
Sbjct: 228  VSKEAQLASSKEFVKSYENELGPLKTHLKEIEQNLSKIVRLDNDIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE +  + + K L    
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDMYHNHQRTVREKERKLIDCQRELDRTNKESKLLNHEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L     APF+     NF   ++  
Sbjct: 344  SGLLVEQGRLQLQANHHQQNIRARDSLIQALATHLELDGYERAPFNERQIKNFQKLVKE- 402

Query: 298  LSDLERDLE-DKKKSDELALK--MAWDSYLDANDRWKNIEAQKQAKMEI---KAGILKHI 351
                ER++E +++  ++ A K  M      +  D+   +E   + K+EI   K   LK++
Sbjct: 403  --IEEREIETNRRMMNDFAGKESMKQKQIDEIRDKKTGLERIIELKLEIQNKKQTELKNV 460

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMD 411
            K        +ELQ    +   I E + ++R     KT      E E+   +K S + A+ 
Sbjct: 461  K--------YELQELEGSSDRILELDQELR-----KT------ELELGKAEKNSNIGALK 501

Query: 412  QKIKALNREKDVLAGDSEDRVKLALKKAELENH----KKKHKKIIDEYKDKIRDVLKGRL 467
            +++ AL REK    GD +  ++   ++ E  NH    + + + +  +  DK   +     
Sbjct: 502  EEVPALLREK----GDLDRSLRKLDQEMEQLNHHTMTRTQMEMLTRDKADKDEQI----- 552

Query: 468  PLDRDLKKEITQALRALLTEF-------DDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
               R +K      L +LL  F       D L SKS    KE+N  + ++ +    L+   
Sbjct: 553  ---RKIKSRHNDELTSLLGYFPNKKQLEDWLHSKS----KEINQTRDRLAKFNKELASAE 605

Query: 521  KDVDSKKRFIESKLESLNQ---QIFSIDTYQ-------KVLDSAKEKRDVQKSKYNIADG 570
            ++ +     ++ K E L+Q   ++F +   Q       K++D   EK   Q++   +  G
Sbjct: 606  QNKNHINHELKQKEEQLSQYEDKLFDVCGSQDFESDLDKLMDEI-EKSSKQRA---MLAG 661

Query: 571  MRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSN 627
               ++  F  +        CP C+R F  E E  + +   + K   + + +K    E   
Sbjct: 662  ATAVYSQFITQLTDEKQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKR 721

Query: 628  ADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD 687
             +    ++ +L+ + +  ++L +  IP     L  +  ++       ++   +L  I  +
Sbjct: 722  REKRRNEMMELKPMRQSIIELKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTIIPE 781

Query: 688  KESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELS---- 740
            +ES +  +  V   +RL  E++  ++++      L    QGV   RT++++  E      
Sbjct: 782  EESAKACLTDVTIMERLQMELRDVERKIAQQAAKL----QGVDLDRTVQQVNQEKQEKQH 837

Query: 741  --GSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEEL 798
               ++S+K  L  +L  ++D+Q  +++  S +    + L+ EK++ ++ L+  ++ EE+ 
Sbjct: 838  RLDTVSSKIELNRKL--IQDQQEQIQHLKSTV----NELKSEKLQISSNLQRRQQLEEQT 891

Query: 799  EHLMEEKGQL-----DLDEKLLA-EAS-GPLSKEKEKLLSDYNDLKVKLNREYEEQAEQK 851
              L  E   L     D  E+L   EA+ G L +EKE+L++  N             A++K
Sbjct: 892  VELSTEVQSLHREIKDSKEQLCPLEATLGKLQQEKEELINKKNT--------SNSAAQEK 943

Query: 852  IN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDR 910
            +N  +++++ +      I+ Y    KD    + + + +   S++  C+ + D+I  E+  
Sbjct: 944  LNDIKEKVKNISSYMKDIENYIQDGKDSYKTQKEAELNNVISQLNECEKQKDKISKEMGT 1003

Query: 911  FKDIVRNQDQIRRNIEDNLNYRE-------------------TKAKVDKFASEIESLEER 951
             +  +  Q    R ++DNL  R+                    + +V +  +E ++LEE+
Sbjct: 1004 MRQDIDMQKVQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQLKNEYQTLEEK 1063

Query: 952  VLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKR 1011
            +         ET      L+R+  L+ + R +G    Y+  I   K +L++ Q+ D +++
Sbjct: 1064 I---------ET------LKRNHSLA-LGRQKG----YEEEIIHFKRELREPQFSDAEEK 1103

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
            + + +I ++TTE+ NKDLD YY ALD A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI
Sbjct: 1104 YREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYI 1163

Query: 1072 RIHSDSEGAGT-----RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1126
             I SD++   T     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCL
Sbjct: 1164 EIRSDTDENVTASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCL 1223

Query: 1127 NCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHA 1186
            NCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ 
Sbjct: 1224 NCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYV 1283

Query: 1187 EKYYRVAKDDHQHSII 1202
            EK+YR+ K+  Q S I
Sbjct: 1284 EKFYRIRKNIDQCSEI 1299


>gi|355715053|gb|AES05210.1| RAD50-like protein [Mustela putorius furo]
          Length = 1311

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 346/1234 (28%), Positives = 637/1234 (51%), Gaps = 77/1234 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQAELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+  + +   
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNS 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +    + +  + TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q      
Sbjct: 288  ELEKKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS IQ L  +  L      PF+     NF   +R R    
Sbjct: 348  VEQGRLQLQADRHQEHIQARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRER---- 403

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHIKEKE 355
                  +++  E+A ++  D       + K I+  +  K      +E+K+ IL    +K+
Sbjct: 404  ------QEREAEIASQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEIL---TKKQ 454

Query: 356  NERDSFELQISNLNLS-----HIDERENKMRIEV---ERKTNQLAEREFEINIRQKQSEL 407
            NE  + + ++  L  S      +D+  +K   E+   E+  N  A +   IN++ ++++L
Sbjct: 455  NELRNVKHELQQLEGSSDRILELDQELSKAERELSKAEKNNNVEALKTEVINLQNEKADL 514

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
               D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  
Sbjct: 515  ---DRTLRKLDQEMEQLNYHTTTRTQMEMLTRDKADKDEQIRKIKSRHSDELTSLL-GYF 570

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVD 524
            P  + L+              D L SKS    KE+N  + ++ ++   L+   +++  V+
Sbjct: 571  PNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKNHVN 612

Query: 525  SKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +     ++  L+  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKKKEERLSSYEDKLFDVCGSQDFESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  E +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V
Sbjct: 733  VPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQDTLLGTIMPEEESAKVCLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEK 755
               +RL  E++  ++++      L    QG+   RT++++  E        D + +++E 
Sbjct: 793  TIMERLQMELKDVERKIAQQAAKL----QGIDLDRTVQQVNQEKQEKQHKLDTVSSKMEL 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLL 815
             R   +  +  + +++   + L+ EK+  +  L+  ++ EE+   L  E   L  + K  
Sbjct: 849  NRKLIQDQQEQIQHLKSTTNELKSEKLHISTNLQRRQQLEEQTVELSTEVQSLFREIKDA 908

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLR 875
             E   PL    EK   +  ++  K N+  +   ++  + +++++ +      I+ Y    
Sbjct: 909  KEQLSPLETTMEKFQQEKEEIINKKNKSNKIAQDKMNDIKEKVKNIHGYMKDIENYIQDG 968

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
            KD+  K+ + + ++  +++   +   + I  ++   +  +  Q    R ++DNL  R+  
Sbjct: 969  KDDYKKQKENELNKVVAQLNEYEKHKENINKDMGIMRQDIDTQKIQERWLQDNLTLRKRN 1028

Query: 936  AKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNI 993
             ++       E  ++ + ++G +   + +     LE   D +    +   G    Y+  I
Sbjct: 1029 EEL---KEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHDLAVGRQKGYEEEI 1085

Query: 994  SRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINK 1053
               K +L++ QY+D ++++ + LI ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINK
Sbjct: 1086 IHFKRELREPQYRDAEEKYREMLIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINK 1145

Query: 1054 IIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            IIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQ
Sbjct: 1146 IIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQ 1205

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+
Sbjct: 1206 KVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLL 1265

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            VITHDE F +L+G+ ++ +K+YR+ K+  Q S I
Sbjct: 1266 VITHDEDFVELLGRSEYVDKFYRIKKNIDQCSEI 1299


>gi|410914658|ref|XP_003970804.1| PREDICTED: DNA repair protein RAD50-like [Takifugu rubripes]
          Length = 1312

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 360/1259 (28%), Positives = 640/1259 (50%), Gaps = 129/1259 (10%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K++E V+  I    GEKV LS +C DMDRE+ + +GVSK +L +VIF HQ+E+NWPL +
Sbjct: 111  FKSLEQVITRIKD--GEKVSLSSKCGDMDREMISSLGVSKPVLNHVIFCHQEESNWPLSE 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK+KFD IF+AT+Y KALE +++L   Q Q +K  +++L  L+  K+ A ++RE+++
Sbjct: 169  GKALKEKFDAIFAATKYIKALETMRQLRHKQTQTVKECQVELRYLKQNKEKAQQIRETVA 228

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              + +  A ++ +Q++E  I  +++++   +  L  + K+ + I  + +R+  + EQ  K
Sbjct: 229  TKEAQLMASRDSVQQIEDRITPLENQLTDIDTKLGKVMKLDNDIKALESRKKQM-EQDNK 287

Query: 183  QYAALAEEI-EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +     E++ + +DE+L++   N +  V ++E  ++  ++E      + + L +      
Sbjct: 288  ELEETMEQVFQGSDEQLQDVYQNHQRTVKQKERRLADNQKELEKAGRECQRLNRVKADLL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRL--- 298
             E   L  EA  HM  +  RD+ ++ L +   L      PFS+    +F   +  RL   
Sbjct: 348  VEQGRLRLEADRHMDNIMTRDTQVRSLSSYLGLEGYDRPPFSDLQLDSFHRHVTERLEQE 407

Query: 299  --------SDLER----------DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK 340
                    ++L+           D+ DKK   E  +++  D         ++I AQ Q +
Sbjct: 408  KETVSQVMAELQEKEQRKQQSIDDMRDKKTGLERTVELKRDLQGKKQQELRDIRAQLQ-R 466

Query: 341  MEIKAGILKHIKEKENERDSFELQI-SNLNLSHIDERENKMRIEVERKTNQLAEREFEIN 399
            +E   G    ++E E+E    E ++ S +  S+++E +N+                    
Sbjct: 467  LE---GSSSRLQELESELAKVERELHSTIQSSNVEELKNE-------------------- 503

Query: 400  IRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLAL---KKAELENHKKKHKKIIDEYK 456
            + + Q E   +D   + L++E ++L   +  R ++ +   +K E E+H +K   I   + 
Sbjct: 504  VGELQREKTDLDHSQRRLDKEMEMLNTHTTARTQMDMLNREKMEKEDHIRK---IKSRHS 560

Query: 457  DKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL 516
            + +  +L G  P   +L+              D + SKS+E           I    D L
Sbjct: 561  EDLVSLL-GHFPNKIELE--------------DWIYSKSKE-----------ITNTRDRL 594

Query: 517  SKHRKDVDSK---KRFIESKLESLNQQIFSID-TYQKVLDSAKEKRDVQKSKYNIAD--- 569
            +K  KD+ S    K  I ++L    QQ+ + + T+  V  S   ++D+ K + ++     
Sbjct: 595  AKLNKDLASSEQNKNHIAAELRKKEQQLVNDEETFFNVCGSQDLEQDLSKLQEDLEKVSK 654

Query: 570  ------GMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKV 620
                  G   ++  F  +        CP C+R F +E E  E +   + K     + ++ 
Sbjct: 655  QRAMLAGATAVYTQFISQLTEEREPCCPVCQRTFPSESELQEVISDMQSKLRLVPDKLRN 714

Query: 621  LSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGV 680
               +    +     +  LR V    V L ++ +P     L  +  E+++ +   ++   +
Sbjct: 715  TEQDLKKKERKRDDMVALRPVRLTIVHLQEKELPELRNRLQTVNREIEKLNGDIEEQETL 774

Query: 681  LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQL 737
            L  + +++E+ +  +Q +   +R   +++  ++++        +R QGV   RT++++  
Sbjct: 775  LRTLMSEEETAKACLQDISLMNRYLMDLKEVERKI----AQHAARLQGVDLSRTIQQVSQ 830

Query: 738  ELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEE 797
            E        D   +++E  R   +  ++ +  ++   +  REEK++ ++ ++  ++ EE+
Sbjct: 831  EKQEIQHKLDTTSSKMELKRKLIQDQQDQIQMLKSAVNETREEKLQLSSNMQKCQQLEEQ 890

Query: 798  LEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQ 856
                  E   L  D +   E   PLS   EKL  +  +L +   R+ +E+ ++KIN  ++
Sbjct: 891  CVEFTTEIQSLTRDIREAKEQLSPLSVALEKLQQEKQEL-LDHKRQRQEEGQEKINAIKE 949

Query: 857  EIEMLLKIASKIKEYYDLRKDERFKELQEKKSQ-SESEVKSCKIRTDEILVELDRFKDIV 915
              + L  +  +I +Y    +DE +KE +E + Q ++S++   +   ++I  E+   +  +
Sbjct: 950  RAKFLSALEGEISKYVKEGRDE-YKEHKEFELQGTDSQLHEAEKHKEKISKEMGTIRQDI 1008

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTF-------ETELGKH 968
              Q    R ++DNL  R+   +V++    I   +  +  +G +          E E    
Sbjct: 1009 DTQKVQERWLQDNLTLRK---RVEELKEVISKRDVLLKDMGNMQVLQLRQERREAENKLE 1065

Query: 969  LLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKD 1028
             L+++R ++ + R +G    ++  I   + +L++ QY   D+ + +++I L+TTE+  KD
Sbjct: 1066 DLKKNRSIA-LGRQKG----FEEEILHYRKELREDQYDKADEHYKNKMITLRTTELVIKD 1120

Query: 1029 LDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTR 1083
            LD YY ALD+ +M+FH+MKM+EINKI+R+LW+ TYRGQDI YI I SD     S G   R
Sbjct: 1121 LDLYYKALDQTIMKFHSMKMDEINKIVRDLWRSTYRGQDIQYIEIRSDVDDSSSAGVKRR 1180

Query: 1084 SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
             Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  
Sbjct: 1181 VYNYRVVMVKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRD 1240

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            N ESLA AL  I+  R  Q NFQL+VITHDE F +L+G+  + E +YR+ K+  Q+S I
Sbjct: 1241 NIESLAHALVEIIRSRSRQRNFQLLVITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEI 1299


>gi|443895345|dbj|GAC72691.1| DNA repair protein RAD50 [Pseudozyma antarctica T-34]
          Length = 1309

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 361/1271 (28%), Positives = 631/1271 (49%), Gaps = 136/1271 (10%)

Query: 1    MEYKAIESVLQTIN--PHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +LQ  +    TG++  LS +C+++D E+P L+GVS++ILENVIF HQ+++NW
Sbjct: 108  LTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDEEIPRLLGVSRSILENVIFCHQEDSNW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P++LKKKFDDIF ATRYTKAL+ IK L KD+  ++K  K  LE L+  KD A  ++
Sbjct: 168  PLAEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTNQLKVDKAALEGLKVDKDRADTIK 227

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
              ++        L+  + + E  ++D++++I    +          +   + +R  TL E
Sbjct: 228  SKLTH-------LQADLAQKEAKLEDLNEEIRIKTVQNSKFYDEATRFREIVSRAETLEE 280

Query: 179  QQQ------KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            +++      +   A    I+D DE+L+  K  F   + +  + IS L+       T+I  
Sbjct: 281  KERLHKENMEALKATMTPIKDNDEDLQKRKQTFRAQLDQSHAKISTLQ-------TRIAK 333

Query: 233  LEQNIDAYTAEITNLLSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNE 285
             E  ++A+       LS+ G       AH+    +R++ ++++     +        S+ 
Sbjct: 334  REDELEAHEQRHRKKLSDKGGLEAEKRAHVQAKEKRETAVKRISNELGIKGFAGDGLSDA 393

Query: 286  AALNFINRIRSRLSDLERDL-----EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK 340
               +F NR++  +  L+ +L      + +K D+L               W+N  A+ +AK
Sbjct: 394  QIRSFENRVKEDMRKLDDELGRLREANAQKDDQLTTA------------WQNARAELRAK 441

Query: 341  MEIKAGILKH-------IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAE 393
               +  ++ +       IK  + E D + L  +++  +   ERE+ +  ++     +  +
Sbjct: 442  QNAREQLVDNVRKLREKIKRAQEELDGYALSDADVEAA-TRERES-LAAKLTAAQKEFTD 499

Query: 394  REFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIID 453
              ++  IR+K +E+   D   +    E ++L   +E R  LALK  +  + +   + + +
Sbjct: 500  ANYDEQIRRKNAEIREKDDLREERTAEINLLNRHAELRASLALKMQQAGSRRTNAQGLFE 559

Query: 454  EYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVT 513
             +K  I   +   + L   ++ E+ + L  L  +  ++ +K+ E +++       +QEV 
Sbjct: 560  RHKASISQHVASDVELS-SVEHELMRTLSKLEKQASEVEAKNVEKNRQ-------LQEVE 611

Query: 514  DNLSKHRKDVDSKKRFIESKLESLNQQIFSI-----DTYQKVLDSAKEKRDVQKSKYNIA 568
              +S  RK + SK    E+    L Q I +I     D+ ++ +    E+    K +Y   
Sbjct: 612  STISFARKQLKSK----EAAANELQQAITAILSPDFDSAEEAVKVCAEEIAAAKDEYASI 667

Query: 569  DGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESS 626
            D +        R A+    C  C R  +  E +   K     +  +++AE  K L    +
Sbjct: 668  DSLDSFLRRVLREAKGKGHCFACNRGVNPSEYEAIEKHVSSTLSTSNTAEKKKTLK---A 724

Query: 627  NADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKA 686
            + D + ++  + +    + V+L      +    + EL + LD K      V     +  A
Sbjct: 725  DIDGWTERSAECQTALAKDVQLK----AIRGTEMAELQKTLDTKEAELKQVAAAAEEASA 780

Query: 687  DKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK 746
            +   ++  ++ +++  R+  +I     +  DLE    S  +G+++     L  +GS  T 
Sbjct: 781  EVSKIQSQLKELQSLRRVGSDIARLLAEAGDLE----SEVRGLQS----DLATTGSTQTG 832

Query: 747  DNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTL-RDVKKAEEEL------- 798
            + +Q E+++L    R ++ +L+ +Q      RE K    N+L RD  +AE  +       
Sbjct: 833  EQVQAEIDQLASSIRVLKRELNVLQ----QDRETKRTLINSLERDAHRAEVAVITKQQEQ 888

Query: 799  -------EHLMEEKGQLDLDEK----LLAE---ASGPLSKEKEKL---LSDYNDLKVKLN 841
                    HL E    L+  +K    L AE   ++ P+ + KE+L    ++  + + KL 
Sbjct: 889  AKKTAVQTHLGEMNADLEEQQKRIKSLEAEIETSNAPIRRAKEELETFKAEAGEAENKLK 948

Query: 842  REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT 901
            R  +E        +   + + ++ + +  Y   R DER +E +E  +    ++++     
Sbjct: 949  RRADE-------LEGWAKQIRELNAAVNAYIQQRGDERLEECEEAINTLVEQIQAIHRDV 1001

Query: 902  DEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE----ERVLKIGG 957
             E+  +    +  +       RNI DN+ YR+    V +   EI SL+    +R  K   
Sbjct: 1002 KELTDKAAELQKELNQSQATERNILDNIRYRQLAKDVAQIEEEINSLDLEQAQRSRK--- 1058

Query: 958  VSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLI 1017
               F  +  +   E ++L  E +   G ++  ++ I   + +L+  ++K + + +  +LI
Sbjct: 1059 --HFADKYTEAKEEENKLNGEASHLSGELASLRSQIKGREAELRD-EFKGVHQNYKRKLI 1115

Query: 1018 QLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS 1077
            ++KT+EMAN DL++Y  AL+ A+MR+H +KMEEIN I+R LWQ+TY+G DID I I SD+
Sbjct: 1116 EVKTSEMANNDLEKYAKALENAIMRYHAIKMEEINDIVRYLWQKTYQGTDIDTILIKSDN 1175

Query: 1078 EGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            EGA G RSY+Y+V M     E++MRGRCSAGQKVLAS+IIRLALAE+F  NCGILALDEP
Sbjct: 1176 EGARGKRSYNYRVCMVKDTVEMDMRGRCSAGQKVLASIIIRLALAESFGSNCGILALDEP 1235

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N E+LA +L  ++++R      QLIVITHDE F  L+GQ    E Y+RV++D 
Sbjct: 1236 TTNLDKDNIEALARSLADLIKERAENSQLQLIVITHDEDFLTLLGQNDVLEYYWRVSRDV 1295

Query: 1197 HQHSIIEAQEI 1207
            HQ SIIE + I
Sbjct: 1296 HQKSIIERERI 1306


>gi|395331066|gb|EJF63448.1| hypothetical protein DICSQDRAFT_83114 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1308

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 364/1253 (29%), Positives = 633/1253 (50%), Gaps = 107/1253 (8%)

Query: 1    MEYKAIESVL---QTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
            +  K +ES+L   + +   +G++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ 
Sbjct: 108  LTMKTLESILGLAENVEKGSGKRGVISTKCAEMDTEIPHLLGVSKAVLENVIFCHQEDSY 167

Query: 58   WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
            WPL +P+ LKKKFDDIF AT+YTKAL+ IK L KD+  E+K    +LE+L   K  A KL
Sbjct: 168  WPLSEPAALKKKFDDIFEATKYTKALDNIKALRKDRVAELKAETERLESLAREKGHADKL 227

Query: 118  RESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTEL---TLKDLRKMQDQISTMTARRS 174
            ++ I++  +K  A   + +EL+ +    D ++   ++   T    R++  ++  +  R+ 
Sbjct: 228  KDRITEMNDKIAARTAEYEELKAAY---DQQVRSNQILNDTGSKFREIYVKVDQLNQRKD 284

Query: 175  TLFEQQQKQYAALA----EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
                 Q K+   LA    +EIE TD+EL          V   +  I   ++++   + ++
Sbjct: 285  -----QYKEELNLAKENLQEIEGTDDELAER-------VRTHDDYILNQKQKRKTQEGRL 332

Query: 231  KFLEQNIDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFS 283
            +  E  I A  A    L+S+ G  ++       RM ERD  I  L AR ++     +   
Sbjct: 333  EDAEDAIRAARASHVELMSKQGELLAEERLVDQRMLERDELIHDLAARFHIKGFEQSSIK 392

Query: 284  NEAALNFINRIRSRLSDLER---------DLEDKKKSDELALKMAWDSYLDANDRWKNIE 334
             E A  FI    + L+D++R          +E + +++E   K        +     ++E
Sbjct: 393  REEAQQFI----AALNDVKRRQHAETDRLQVESRTRNEEYNFK--------SRQLHTDLE 440

Query: 335  AQKQAKMEIK---AGILKHIKEKENERDSFELQISNLN--LSHIDERENKMRIEVERKTN 389
              KQ +  ++   + +   I   E E D+     S L    + I+E+ N++     R   
Sbjct: 441  GHKQERRSLRERVSTLQGRITGAEREVDAARALTSRLAELKADIEEKRNRL----ARARE 496

Query: 390  QLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHK 449
            + A   FE  IR+  S+   ++++   LN E   L+  ++ R KL L++ +L+    + K
Sbjct: 497  EFASAGFEDKIREAVSQSAKLNERRDDLNDELRTLSLQADSRAKLELQRTQLKAKTGEIK 556

Query: 450  KIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKI 509
              ID    K R ++ G      ++++E+ +A      E  +L  +S  A K +   Q  +
Sbjct: 557  TTIDLCNAKFRKLV-GVDARPENMEQELDRAALEKEREQSELEVQSSNASKNLQAAQASL 615

Query: 510  QEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIAD 569
              +   +   + ++ +  + I++ L+          + +  +D A ++  ++      + 
Sbjct: 616  SNLRAQVRAKQDEIKNLDKRIQAGLKEGEYD----GSVEDAIDGATKEIGIRNEDLGKSA 671

Query: 570  GMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKK-QRVKAASSAEHMKVLSLESSNA 628
            G   +++ F +  R+   CP C R     E   F K        S+ + +K L  E  + 
Sbjct: 672  GSHDVYERFLKTGRSKKCCPLCVRGLDDREMATFEKNIMEALKKSTPQAIKELQKELQDW 731

Query: 629  DSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADK 688
            +S  ++L  L ++      +    +P  EK +     E+   +   ++    LA++  D 
Sbjct: 732  ESELKRLQDLAVLSASKNNVQTAELPSLEKQIKVKEAEIPALTTEAEEAAAKLAEVSRDL 791

Query: 689  ESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV------RTMEEIQLELSGS 742
            + + V+ Q   +  +  ++IQ  ++ +  LE  L + G         R +++++ EL  S
Sbjct: 792  KEIAVMRQHAVSVSKAQKDIQRLKQDIAALESDLVATGSTKTADDVQRELDQVKDELKAS 851

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
               KDNL  + E      R +E DL       H    E+ +  N LRD  + E  +E + 
Sbjct: 852  DRRKDNLIQDREGKNAVLRQLEADL-------HKKELEESECRNQLRDKDELERRIEEMK 904

Query: 803  EE--KGQL---DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREY--EEQAEQKINFQ 855
             E    Q+   DLD K+ AEA  P+    EKL  ++ +L+ +LN +    ++A Q++N  
Sbjct: 905  AEIATAQIRLKDLDTKI-AEAQEPI----EKLEREHKELERELNAKILQAQKASQELNMG 959

Query: 856  QEIEMLLKIASKIKEYYDLRKD---ERFKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
             +     K+ S+ K  Y   K+   +R +EL E   + E EV+   +  ++I  +L    
Sbjct: 960  AD-----KLESQNKWLYRNSKEKIGQRVRELNELIDEKELEVREQALTLEQIRAKLGDID 1014

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLLE 971
              +        N+ +N+ +R  K  +    +E+++++ E   K   + T +  + K   +
Sbjct: 1015 KEISEAAVTLANLRENIRFRRLKRDLAATEAELDAIDMEEAAKAKRIWTEKWNVEKQ--K 1072

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDR 1031
               L ++     G +S  +  +   + D+  A +K+++K++ DQLI++K ++M N DL++
Sbjct: 1073 ETELQTKYAHIGGEVSSLKAQLKTLEGDM--ADFKNVNKKYRDQLIKVKMSDMVNNDLEK 1130

Query: 1032 YYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVL 1090
            Y  ALD A+M++H++KMEE+N  +R LW +TY+G DID I+I SDSEG  T RSY+Y+V+
Sbjct: 1131 YAKALDNAIMKYHSLKMEELNDTMRHLWNKTYQGTDIDGIKICSDSEGGATKRSYNYRVV 1190

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M     E++MRGRCSAGQK+LAS+IIRLALA++F  NCGILALDEPT  LD  N ++LAA
Sbjct: 1191 MTKDQVEMDMRGRCSAGQKMLASIIIRLALADSFGQNCGILALDEPTNALDTENIDALAA 1250

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            +L  I+ +R+   NFQL++ITHDE F + +GQ    E Y+RV++D  Q SIIE
Sbjct: 1251 SLVDIINERRDHANFQLVIITHDENFLRKLGQSNVMEYYWRVSRDSRQKSIIE 1303


>gi|169858554|ref|XP_001835922.1| RAD50 [Coprinopsis cinerea okayama7#130]
 gi|116503092|gb|EAU85987.1| RAD50 [Coprinopsis cinerea okayama7#130]
 gi|157428273|gb|ABV56236.1| RAD50 [Coprinopsis cinerea]
          Length = 1309

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 363/1257 (28%), Positives = 645/1257 (51%), Gaps = 110/1257 (8%)

Query: 1    MEYKAIESVLQTINPH-TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWP 59
            +  K +ES+L   +P  T ++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ WP
Sbjct: 108  LTMKTLESILGLDDPGKTNKRAVISTKCAEMDVEIPQLLGVSKAVLENVIFCHQEDSYWP 167

Query: 60   LQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR- 118
            L +PS LKKKFD+IF AT+YTKAL+ IK L KD+  ++K  + +L +L+  KD A KLR 
Sbjct: 168  LAEPSILKKKFDEIFEATKYTKALDNIKALRKDRVADLKAEQERLSSLKLQKDRADKLRL 227

Query: 119  ------ESISQDQEKTEALKNQMQELEKS---IQDIDDKIHHTELTLKDLRKMQDQISTM 169
                   +I   + + E  K Q +E++ S     D + K     L ++ L + +      
Sbjct: 228  RMKDLNATIVAKEAEYENAKAQYEEVQNSNRIFYDYNSKFREIYLKVESLEEKK------ 281

Query: 170  TARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK 229
             ++R  L E +   +    +EI  TD++L+N  N F+  V  +   ++K ER + D++ +
Sbjct: 282  KSKRMDLEEARDGNF----QEISGTDDDLQNRLNRFDAHVDSQRERLAKEERRRQDIEDE 337

Query: 230  IKFLEQNIDAYTAEI-TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
            +  L +N +   +E+      EA    +R+ ER+  ++++  + N+  + +         
Sbjct: 338  LTDL-RNREVQLSEMKAQYEVEAKNQRARVIEREELVREIAKQFNITGISSQSLDKSQVS 396

Query: 289  NFINRIRSRLSDLERD---------LEDKKKSDEL-ALKMAWDSYLDANDRWKNIEAQKQ 338
             F+    SRL+DL RD         L+   K+DE  A ++  D         + ++  K 
Sbjct: 397  QFL----SRLTDLRRDRTSEIEQLQLDASAKNDEFNAQRLELD---------RQVQTHKI 443

Query: 339  AKMEIKAGILKH---IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE 395
             K  +K  + +    IK+ + + D      ++LN    + +E + RI+  RK  ++A  E
Sbjct: 444  RKTTLKDQLSERNASIKQAQRQLDEQATHQASLNSLQEEMQEKEERIKKLRK--EMANSE 501

Query: 396  FEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEY 455
             +  +++K      +++K ++L  E   L+  ++ R KL LK+ E+     + + I+   
Sbjct: 502  HDKKLQEKIDLARQLEEKRESLMEETRALSTQADSRAKLDLKRTEIRTKTVEIQTIMKTV 561

Query: 456  KDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDN 515
              K R+  K  L  D   + E+ + +R    + D L +    A   ++ ++ ++  +   
Sbjct: 562  NQKYREHAKRDLDAD-TAEIEVDRVIRQKEDDVDRLEAGLGSARASLHSVETEMANIKAQ 620

Query: 516  LSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYN-IADGMRQM 574
            +S    + +   + I S L +     F +   + V D+     +V +++ N I   + + 
Sbjct: 621  ISAKESECEKHTKKITSSLRA-----FDLSPDKAVNDAI----EVAQTEINHIRSDLEKQ 671

Query: 575  FDP---FERV---ARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESS 626
            F P   ++R+      +H+C  C R   + E  +F    +  +K A   E  + L+ +  
Sbjct: 672  FGPIAVYQRILEEGVNNHICLGCNRGLRSSELKDFKNHLEGMIKDAEKTEK-RDLNNDLE 730

Query: 627  NADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEE---LDQKSQAFDDVLGVLAQ 683
              +     L  L+ +      ++ + IP  +  L E  EE   L++K++   + L    +
Sbjct: 731  EWNRTLVSLTNLKGIEHSRHNITTKEIPALKATLEEKREEHQVLEEKAETLGEEL---EE 787

Query: 684  IKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL 743
             K   +++  L Q V T  RL +EI+  +K+V DLE  L   G   +T++++Q EL+   
Sbjct: 788  AKDTLKALSTLKQNVSTVSRLKKEIERAEKEVSDLETDLSLSG-STKTVDDVQAELNEIT 846

Query: 744  STKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLME 803
            S    ++ E + +  E+      L + + R + L+ E+ K  N L +V K  E ++ +  
Sbjct: 847  SRLRAIEKERQAISTERERQTTALHSFETRLNDLKVEEQKLLNQLNEVDKLSERVQQMKN 906

Query: 804  E----KGQL-DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQE 857
            +      QL DLD K+ AEA  P+   +E+      D   K++     QA+  +      
Sbjct: 907  DIVTFTAQLKDLDTKI-AEAQAPIQGLEEEQRQVKQDFDAKMS-----QAQSLLGQLNAR 960

Query: 858  IEMLLKIASKIKEYYDLRKD-------ERFKELQEKKSQSESEVKSCKIRTDEILVELDR 910
             + L  +   ++ Y   ++D       E  K+ +E + ++ S ++ C+     I  E++ 
Sbjct: 961  TDKLAAVHKDVERYARDKRDRLLEECIENIKQCKEHQGEATSRLQGCREAIKVIEKEIN- 1019

Query: 911  FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHL 969
                       + N+ +N+  R+ + ++ +  +EIES + E   K      F+ +  K  
Sbjct: 1020 ------EAGASQTNLRENIRVRKLQKEILEIQAEIESYDVEEAAK--ARRNFQDQWEKRK 1071

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
             + +RL    +   G +S  ++  +  + D+K+  +KD++K + +QL+++K ++MAN DL
Sbjct: 1072 EKEERLNKSTHHLAGELSSLKSQHATLESDIKE--FKDVNKMYTEQLVKVKISDMANSDL 1129

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYK 1088
            ++Y  ALD A+M++H +KMEE+N  ++ LW +TY+G DID I+I SD EG  + RSY+Y+
Sbjct: 1130 EKYAKALDNAIMKYHGLKMEEVNDTMKHLWNKTYQGTDIDGIKIKSDVEGGASKRSYNYR 1189

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M     E++MRGRCSAGQK+LAS+IIRLAL+++F  NCGILALDEPT  LD  N ++L
Sbjct: 1190 VVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTNALDTENIDAL 1249

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
            A +L  I+ +RK   NFQLI+ITHDE F + +GQ    E Y+RV++D  Q S+IE Q
Sbjct: 1250 AESLVDIINERKSHSNFQLIIITHDENFLRKLGQSDVMEYYWRVSRDARQKSVIERQ 1306


>gi|58262284|ref|XP_568552.1| telomere maintenance protein [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|57230726|gb|AAW47035.1| telomere maintenance protein, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1289

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 377/1271 (29%), Positives = 643/1271 (50%), Gaps = 116/1271 (9%)

Query: 1    MEYKAIESVLQT--INPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +L    +   +G++  +S +C++MD EVP L+GVS+AILENVIF HQ+E+NW
Sbjct: 68   LTMKTLEGILAKTDVGDSSGKRNTISTKCSEMDEEVPYLLGVSRAILENVIFCHQEESNW 127

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P+ LKKKFDDIF AT+YTKAL+ IK L K++  E+K  K +L+ L+  KD A +LR
Sbjct: 128  PLSEPAALKKKFDDIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKADKDKAERLR 187

Query: 119  ----ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRS 174
                ESISQ+  K   L N ++E  ++I+ I +   + E T    R++ +Q  ++  ++ 
Sbjct: 188  KDLEESISQENRKQTELDN-LKERYETIK-IRNAEFYEEAT--HFRQIYEQSKSLKEKKK 243

Query: 175  TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEG----IVAKRESDISKLEREKNDM-DTK 229
             ++E  +K      +E++++ EEL + + NF+     +  +R       E+E++++ D +
Sbjct: 244  -MYEDNRKHSKLNMQEMDESTEELLHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLR 302

Query: 230  IKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN 289
            +K  E+N+         L++    +   + ER++ I+++   H+L     +P  +     
Sbjct: 303  VK--ERNLANRQG---GLVAHRQTYERNLREREAAIRQIAKAHDLVGYDYSPLEDSKVAE 357

Query: 290  FINRIRSRLSDLERDL-----EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK 344
            F+++I   +   E DL     E+ +K  EL  ++   S +  +      +A K++K E  
Sbjct: 358  FVDKIYEMVRKAENDLKKLQTENSRKERELQEELDRLSTMKTS-----AQATKKSKEEQI 412

Query: 345  AGILKHIKEKEN-----ERDSFELQISNLNLSHIDERENKMRIEV-----ERKTNQLAER 394
              + + I+  E         S EL+++   L+ ++   +K + E+     + K NQ    
Sbjct: 413  IRLTEKIRTSEATFHSISNPSVELELNQNKLTELEADLSKFQAEITDAKYDEKINQKG-- 470

Query: 395  EFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDE 454
               + IRQK+ E   ++ ++  LNR+ D        R KL L++ ELE    +   ++  
Sbjct: 471  ---LLIRQKELERDNINAELAVLNRKAD-------SRAKLDLQRNELEGKNSQISTLLKT 520

Query: 455  YKDKIRDVLKGRLPLDRDLKKE---------ITQALRALLTEFDDLSSKSREADKEVNML 505
            ++ K R++++  +    D+K E         I++  R L+ E ++ S+ +R+  +    +
Sbjct: 521  HEAKFRELVEVDI---HDVKPEDIEDKVIGAISRKDRDLIQEENNASALNRDHSQ----V 573

Query: 506  QMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKY 565
            Q  +    + L+  ++++ + +R IE+ + ++NQ     +   +   +  E  D+ +S+ 
Sbjct: 574  QASLSRAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEEAKNLAEAFDICRSEI 633

Query: 566  N-----IAD--GMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAE 616
                  I D  G R +++      +A  VC  C R    EE++   +  + +++    AE
Sbjct: 634  ESVQRAIMDKQGSRVVWEGLLTTVKAGGVCEACNRGIKHEEKNAVTRHMEAKIRQLMEAE 693

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVK---LSKETIPVAEKNLHELTEELDQKSQA 673
               V   E     S+ + LD L  V     K   L +  IP  E  + E  E+L    + 
Sbjct: 694  QAGV-DAEIEVEKSWTEILDALIRVEPHEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKE 752

Query: 674  FDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTME 733
             DD    + ++K+    ++ L       +RL+ E    +  V  L+  L+S G   +T+E
Sbjct: 753  VDDSKTSIQKLKSASRDLQNLKATASYINRLYIETGDLKANVKRLQTELESSGSS-KTVE 811

Query: 734  EIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ--IRWHTLREEKVKAANTLRDV 791
            E+Q E+         L  E +    E+    N L   Q  I   +L   ++KA    +D 
Sbjct: 812  EVQKEVDRVSQEIKTLSREQQAFSSEKELKVNALRATQDEIGRKSLHIGRLKAQ---QDK 868

Query: 792  KKAEEE-LEHLMEEKGQL-----DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
            +K EEE L  +    G L     DLD+ + A A  P  KEK + L  +   +    +E  
Sbjct: 869  RKMEEEALSDMQNTLGTLHDELQDLDQTVQA-AEAPW-KEKNETLGRFRTERANAEKEAS 926

Query: 846  EQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEIL 905
             Q     +   EIE   K     + Y     D + +E +   S+ + ++         + 
Sbjct: 927  TQVRMYQSSLGEIEGKHKAC---QAYVAEGNDRKIRENEAAMSEIKRQISQSNDARAALE 983

Query: 906  VELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETEL 965
             E+      +   + ++ NI  NL YRE   K++   +E++ L+        + +     
Sbjct: 984  AEISALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELD--------LDSAAESR 1035

Query: 966  GKHLLERDRLLSEVNRCQGTMSVYQTNI-----SRNKIDLK-QAQYKDIDKRHFDQLIQL 1019
             K   E   +L E    QG M++ Q  +     +R K++   +  YK+IDK H +QLI+ 
Sbjct: 1036 AKFNKEYKGMLDEETEAQGLMAITQGGLLEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKT 1095

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
              +E AN DL++Y  ALD A++++H++KM+EIN  I  LW +TY+G DID IRI SD + 
Sbjct: 1096 TISEYANNDLEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDE 1155

Query: 1080 AGT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            A T   +SY+Y+V+M   + EL+MRGRCSAGQKVLAS+IIRLALAE+F   CG+LALDEP
Sbjct: 1156 ASTSTRKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEP 1215

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N  +LA +L  I+ +R+ Q NFQLIVITHDE F Q + ++   E Y+RV++D 
Sbjct: 1216 TTNLDQENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDA 1275

Query: 1197 HQHSIIEAQEI 1207
             Q S++E Q +
Sbjct: 1276 SQKSVLERQRV 1286


>gi|301620437|ref|XP_002939584.1| PREDICTED: DNA repair protein RAD50 [Xenopus (Silurana) tropicalis]
          Length = 1269

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 362/1232 (29%), Positives = 619/1232 (50%), Gaps = 116/1232 (9%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRMKH-GEKVSLSTKCAEMDKEMISALGVSSAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK KFD+IFSATRY KALE ++K+  +QAQ ++ Y+++++ L+             
Sbjct: 168  EGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVREYQVEIKYLK------------- 214

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
             Q++EK   +++ +Q  EK +    + +   E  L+ L+  Q                  
Sbjct: 215  -QNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKVFQG----------------- 256

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                        TDEEL +   N +  V ++E    KL   + DMD   K   Q ++   
Sbjct: 257  ------------TDEELSDMYQNHQRTVREKER---KLNDHQRDMDRACKE-SQRLNREK 300

Query: 242  AEI----TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
             E+      L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++  
Sbjct: 301  GELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVK-- 358

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDAN--DRWKNIEAQKQAKMEIKAGIL--KHIKE 353
                ER  +D+  ++++  + +    +     D  ++ +   +  +E+K+     KH   
Sbjct: 359  ----ERQEKDEAHANQILREFSEREAMKQRQIDEIRDKKTGLERTIELKSSTQSKKHTDL 414

Query: 354  KENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQK 413
            K  + +  +L+ S+  L  +DE   K   E+E              + Q QS+   +D+ 
Sbjct: 415  KNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVAQLQSQKSDLDRN 474

Query: 414  IKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDL 473
            ++ L++E + L   +  R ++ + K +  +  ++ +KI   + D++  ++ G  P  + L
Sbjct: 475  VRKLDQEMEQLNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDELSSLI-GYFPNKKQL 533

Query: 474  KKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL---SKHRKDVDSKKRFI 530
            +              D L SK     K+VN  + K+   T  L    +++  + ++ R  
Sbjct: 534  E--------------DWLYSKR----KDVNQTREKLARFTKELVAAEQNKNHLSNELRRK 575

Query: 531  ESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARAH 585
            E +  S  +++F +   Q    D ++ + D++K+    A   G   ++  F         
Sbjct: 576  EEQSTSFEEKVFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQ 635

Query: 586  HVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEE 644
              CP C+R F +E E  + +   + K     + +K    E    +    ++ +L+ + + 
Sbjct: 636  PCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKAAEGELKRKEKRKDEMMELKPMRQM 695

Query: 645  YVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
               L ++ +P     L  +  E+ +     ++   ++A   +++ES +  +Q +   +R 
Sbjct: 696  LADLKEKEVPEIRNKLVAINREIQRLKNDVEEQETLIATFVSEEESAKACLQDISLMER- 754

Query: 705  FQEIQLWQKQVDDLEYMLD---SRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRD 758
                  +Q ++ D+E  +    ++ QGV   RT++++  E      + DN+  ++E LR 
Sbjct: 755  ------YQMELRDVERKIAQYATKLQGVDLNRTVQQVNQEKQEKQHSLDNVSGKIELLRK 808

Query: 759  EQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEA 818
              +  +  +  ++   + L  EK+  ++ L+  ++ EE+   L  E   L  + K   E 
Sbjct: 809  RIQDQQEQVQQLKSTVNELTAEKLHISSNLQRRQQLEEQNVELTTELQCLSREIKEAKEQ 868

Query: 819  SGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
              PL    +K   +  +L  +    Y E A++K+N  +E    + + SK  E Y     E
Sbjct: 869  VFPLESTLQKFQQEKQELLQRKELSYRE-AQEKVNDIKEKVKKINLFSKDIEKYIQDGKE 927

Query: 879  RFKELQEKKSQSE-SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAK 937
             FKE +E + Q   + +  C+ + ++I  E+   +  +  Q    R ++DNL  R+   +
Sbjct: 928  DFKEQKECELQELIARLNECEKQKEKINREMVNIRQDIDTQKIQERCLQDNLTLRKRIEE 987

Query: 938  VDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNISR 995
            + +   E + L   + ++G +   + +     LE   + L +  +   G    ++  I R
Sbjct: 988  LKRVEEERQQL---LKEMGQMKVMQMKNEHQELENKSETLKTNHSLALGRQKGFEDEILR 1044

Query: 996  NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKII 1055
             K +L++ QYKD ++++ D++I ++TTE+A KDLD YY  LD+A+M+FH+MKMEEINKII
Sbjct: 1045 FKKELREPQYKDAEEKYRDKMIVMRTTELAIKDLDIYYKTLDQAIMKFHSMKMEEINKII 1104

Query: 1056 RELWQQTYRGQDIDYIRIHSDS-EGAGT----RSYSYKVLMQTGDAELEMRGRCSAGQKV 1110
            R+LW+ TYRGQDI+YI I SD+ EG       R+Y+Y+V+M  GD  L+MRGRCSAGQKV
Sbjct: 1105 RDLWRSTYRGQDIEYIEIRSDADEGVSAADKRRTYNYRVVMIKGDTALDMRGRCSAGQKV 1164

Query: 1111 LASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVI 1170
            LASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+VI
Sbjct: 1165 LASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLVVI 1224

Query: 1171 THDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            THDE F +L+G+ ++ E +YR+ K+  Q S I
Sbjct: 1225 THDEDFVELLGRSEYVEHFYRIKKNIDQCSEI 1256


>gi|134118852|ref|XP_771929.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50254533|gb|EAL17282.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1329

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 376/1271 (29%), Positives = 642/1271 (50%), Gaps = 116/1271 (9%)

Query: 1    MEYKAIESVLQT--INPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +L    +   +G++  +S +C++MD EVP L+GVS+AILENVIF HQ+E+NW
Sbjct: 108  LTMKTLEGILAKTDVGDSSGKRNTISTKCSEMDEEVPYLLGVSRAILENVIFCHQEESNW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P+ LKKKFDDIF AT+YTKAL+ IK L K++  E+K  K +L+ L+  KD A +LR
Sbjct: 168  PLSEPAALKKKFDDIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKADKDKAERLR 227

Query: 119  ----ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRS 174
                ESISQ+  K   L N ++E  ++I+ I +   + E T    R++ +Q  ++  ++ 
Sbjct: 228  KDLEESISQENRKQTELDN-LKERYETIK-IRNAEFYEEAT--HFRQIYEQSKSLKEKKK 283

Query: 175  TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEG----IVAKRESDISKLEREKNDM-DTK 229
             ++E  +K      +E++++ EEL + + NF+     +  +R       E+E++++ D +
Sbjct: 284  -MYEDNRKHSKLNMQEMDESTEELLHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLR 342

Query: 230  IKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN 289
            +K  E+N+         L++    +   + ER++ I+++   H+L     +P  +     
Sbjct: 343  VK--ERNLANRQG---GLVAHRQTYERNLREREAAIRQIAKAHDLVGYDYSPLEDSKVAE 397

Query: 290  FINRIRSRLSDLERDL-----EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK 344
            F+++I   +   E DL     E+ +K  EL  ++   S +  +      +A K++K E  
Sbjct: 398  FVDKIYEMVRKAENDLKKLQTENSRKERELQEELDRLSTMKTS-----AQATKKSKEEQI 452

Query: 345  AGILKHIKEKEN-----ERDSFELQISNLNLSHIDERENKMRIEV-----ERKTNQLAER 394
              + + I+  E         S EL+++   L+ ++   +K + E+     + K NQ    
Sbjct: 453  IRLTEKIRTSEATFHSISNPSVELELNQNKLTELEADLSKFQAEITDAKYDEKINQKG-- 510

Query: 395  EFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDE 454
               + IRQK+ E   +  ++  LNR+ D        R KL L++ ELE    +   ++  
Sbjct: 511  ---LLIRQKELERDNISAELAVLNRKAD-------SRAKLDLQRNELEGKNSQISTLLKT 560

Query: 455  YKDKIRDVLKGRLPLDRDLKKE---------ITQALRALLTEFDDLSSKSREADKEVNML 505
            ++ K R++++  +    D+K E         I++  R L+ E ++ S+ +R+  +    +
Sbjct: 561  HEAKFRELVEVDI---HDVKPEDIEDKVIGAISRKDRDLIQEENNASALNRDHSQ----V 613

Query: 506  QMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKY 565
            Q  +    + L+  ++++ + +R IE+ + ++NQ     +   +   +  E  D+ +S+ 
Sbjct: 614  QASLSRAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEEAKNLAEAFDICRSEI 673

Query: 566  N-----IAD--GMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAE 616
                  I D  G R +++      +A  VC  C R    EE++   +  + +++    AE
Sbjct: 674  ESVQRAIMDKQGSRVVWEGLLTTVKAGGVCEACNRGIKHEEKNAVTRHMEAKIRQLMEAE 733

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVK---LSKETIPVAEKNLHELTEELDQKSQA 673
               V   E     S+ + LD L  V     K   L +  IP  E  + E  E+L    + 
Sbjct: 734  QAGV-DAEIEVEKSWTEILDTLIRVEPHEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKE 792

Query: 674  FDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTME 733
             D+    + ++K+    ++ L       +RL+ E    +  V  L+  L+S G   +T+E
Sbjct: 793  VDESKTSIQKLKSASRDLQNLKATASYINRLYIETGDLKANVKRLQTELESSGSS-KTVE 851

Query: 734  EIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ--IRWHTLREEKVKAANTLRDV 791
            E+Q E+         L  E +    E+    N L   Q  I   +L   ++KA    +D 
Sbjct: 852  EVQKEVDRVSQEIKTLSREQQAFSSEKELKVNALRATQDEIGRKSLHIGRLKAQ---QDK 908

Query: 792  KKAEEE-LEHLMEEKGQL-----DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
            +K EEE L  +    G L     DLD+ + A A  P  KEK + L  +   +    +E  
Sbjct: 909  RKMEEEALSDMQNTLGTLHDELRDLDQTVQA-AEAPW-KEKNETLGRFRTERANAEKEAS 966

Query: 846  EQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEIL 905
             Q     +   EIE   K     + Y     D + +E +   S+ + ++         + 
Sbjct: 967  TQVRMYQSSLGEIEGKHKAC---QAYVAEGNDRKIRENEAAMSEIKRQISQSNDARAALE 1023

Query: 906  VELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETEL 965
             E+      +   + ++ NI  NL YRE   K++   +E++ L+        + +     
Sbjct: 1024 AEISALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELD--------LDSAAESR 1075

Query: 966  GKHLLERDRLLSEVNRCQGTMSVYQTNI-----SRNKIDLK-QAQYKDIDKRHFDQLIQL 1019
             K   E   +L E    QG M++ Q  +     +R K++   +  YK+IDK H +QLI+ 
Sbjct: 1076 AKFNKEYKGMLDEETEAQGLMAITQGGLLEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKT 1135

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
              +E AN DL++Y  ALD A++++H++KM+EIN  I  LW +TY+G DID IRI SD + 
Sbjct: 1136 TISEYANNDLEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDE 1195

Query: 1080 AGT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            A T   +SY+Y+V+M   + EL+MRGRCSAGQKVLAS+IIRLALAE+F   CG+LALDEP
Sbjct: 1196 ASTSTRKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEP 1255

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N  +LA +L  I+ +R+ Q NFQLIVITHDE F Q + ++   E Y+RV++D 
Sbjct: 1256 TTNLDQENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDA 1315

Query: 1197 HQHSIIEAQEI 1207
             Q S++E Q +
Sbjct: 1316 SQKSVLERQRV 1326


>gi|197215656|gb|ACH53047.1| RAD50 homolog isoform 1 (predicted) [Otolemur garnettii]
          Length = 1311

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 352/1240 (28%), Positives = 639/1240 (51%), Gaps = 90/1240 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GE+V LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228  TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDSRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344  SELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYL------DANDRWKNIEAQKQAKMEIKAGILKHI 351
                ER  ++ + +++L    A    L      +  D+   +    + K+EI++      
Sbjct: 402  ----ERQEKEAETANQLMNDFAEKEALKQKQIDEIRDKKTGLGRIIELKLEIQSK----- 452

Query: 352  KEKENERDSFELQ---ISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
            K+ E +   +ELQ    S+  +  +D+   K   E+ +          ++ +   Q+E  
Sbjct: 453  KQHELKNAKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVEALKMEVISLQNEKV 512

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP 468
             +D+ ++ L++E + +   +  R ++ +   +  +  ++ +KI   + D++  +L G  P
Sbjct: 513  DLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GYFP 571

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
              + L+              D L SKS+E ++  + L  K+ +   +  +++  ++++ +
Sbjct: 572  NKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHINNELK 616

Query: 529  FIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVAR 583
              E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +    
Sbjct: 617  KKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLADE 676

Query: 584  AHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVY 642
                CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  + 
Sbjct: 677  NQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMR 736

Query: 643  EEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETAD 702
            +  + L ++ IP     L  +  ++ +     ++   +L  +  ++ES +V +  V   +
Sbjct: 737  QSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIME 796

Query: 703  RLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEKL 756
            R       +Q ++ D+E  +  +    QG+   RT++++  E        D + +++E  
Sbjct: 797  R-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELN 849

Query: 757  RDEQRYMENDLSNIQIRWHT---LREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEK 813
            R   + +++    IQ+   T   L+ EK++ ++ L+  ++ EE+   L  E   L  + K
Sbjct: 850  R---KLIQDQQEQIQLLKSTTNELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIK 906

Query: 814  LLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYY 872
               E   PL    EK   +  +L  K N    + A+ K+N  +++++ +      I+ Y 
Sbjct: 907  DAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQDKLNDIKEKVKNIHGYVKDIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            +  K++  K+ + + ++  +++  C+   ++I  E+   +  +  Q    R ++DNL  R
Sbjct: 966  EDGKEDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLR 1025

Query: 933  ETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLERDRLLSEVNRCQ----GTMS 987
                K ++   E+E   ++ LK +G +   + +     LE +  +  + R      G   
Sbjct: 1026 ----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEN--IENIKRNHSLALGRQK 1079

Query: 988  VYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMK 1047
             Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MK
Sbjct: 1080 GYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMK 1139

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRG 1102
            MEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRG
Sbjct: 1140 MEEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRG 1199

Query: 1103 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQ 1162
            RCSAGQK  ASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q
Sbjct: 1200 RCSAGQKA-ASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQ 1258

Query: 1163 ENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1259 RNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 1298


>gi|242213363|ref|XP_002472510.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728401|gb|EED82296.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1254

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 365/1263 (28%), Positives = 613/1263 (48%), Gaps = 181/1263 (14%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +  K +ES+L   +   G++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ WPL
Sbjct: 108  LTMKTLESILALADEKKGKRGAISTKCAEMDAEIPHLLGVSKAVLENVIFCHQEDSYWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFDDIF AT+YTKAL+ IK L KD+A E+K  K +L++L T K  A KLR  
Sbjct: 168  AEPSILKKKFDDIFEATKYTKALDSIKALRKDRAAELKAEKERLQSLSTEKAHADKLRSR 227

Query: 121  ISQDQEKTEALKNQMQELEKSIQDI---DDKIHHTELTLKDLRKMQDQISTMTARRSTLF 177
            +S       + + + ++L++  + +   + K + +    ++     D ++    R     
Sbjct: 228  VSDLNATIASKEAEYEQLKRDYERLVTANAKFYESATKFRETYMKLDTLNEKKTRYQAEL 287

Query: 178  EQQQKQYAALAEE-----IEDTDEELKNWKNNFEGIV----AKRESDISKLEREKNDMDT 228
            E  ++    + E      I+ TD+EL +   NF+  +     KR+S++ K    +  ++ 
Sbjct: 288  EDTRENVRDIEENTIINVIKGTDKELADRLKNFDKDLLDQQQKRKSEMYK----QAGIED 343

Query: 229  KIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
             I+ ++Q   +   E   L  E  AH  ++ +R++ I+++ A+H L    + P   E  L
Sbjct: 344  DIRAVQQAHVSLVGEQAKLELELQAHEQQIRDREALIREISAKHQLKGYDHTPLEREKVL 403

Query: 289  NFINRIRSRLSDLER--DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG 346
            +FI    S+LS+L R  +LE                     D+ +N  AQ +        
Sbjct: 404  DFI----SKLSELRRRHNLE--------------------TDKLQNDTAQSR-------- 431

Query: 347  ILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVER---KTNQLAEREFEINIRQK 403
                + E E+E D   +  S L     D  +   R+E  +   K+    +R  E N + +
Sbjct: 432  ----VTEAESELDKASVLASQLRTLQADMEDKARRVESTKADIKSGNFEQRLAEANTKAR 487

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
                  M+ K   L  E   L+  ++ R +L LK+AEL++   + K  +D   +K   ++
Sbjct: 488  N-----MEMKRDELTAEIRTLSLQADARARLDLKRAELKSKSSELKNTLDFNNNKFLKLI 542

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN---------------MLQMK 508
             G       +++E+ +       E  DL S+S  ++KE+                +L++ 
Sbjct: 543  -GTDARPDSMEQEVERVNIEKERELSDLESESNISNKELQTGTANLEAQGIRRYVVLRLI 601

Query: 509  IQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIF-------SIDTYQKVLDSAKEKRDVQ 561
            I   TD L                +L +LN++I          DT    L+SA+++ +++
Sbjct: 602  ICSFTDTL----------------ELLALNERIKEALKQYEGSDTIDAALESAQDELNLR 645

Query: 562  KSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVL 621
            K +       + + D   +  +A   CP C R     E   F KK          H+   
Sbjct: 646  KGEQARGTDSKAVLDGLMKRGKARKCCPLCARNMDDRELSLFEKK----------HV--- 692

Query: 622  SLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVL 681
                    S+ Q L++++      V+ +K+ I + E                 ++ L  L
Sbjct: 693  --------SWCQVLEEIQKYTPAAVQENKKEIRMWE-----------------EETLRKL 727

Query: 682  AQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLEL-- 739
              IK D + + VL Q   T  +  ++I+   +++  LE  L + G   +T +++Q EL  
Sbjct: 728  NDIKKDIKEISVLRQHAATVTQTQKDIERLNREIASLEADLATTG-STKTADDLQEELDA 786

Query: 740  -SGSLSTKD----NLQNELEKLRDEQRYMENDLSNIQIRWHTLREE---KVKAANTLRDV 791
             S +L   D    NL  E E+L +  R  E++LS++++R   L+ E   K      +++ 
Sbjct: 787  LSSALRATDREKQNLLTERERLTNAFRTHESELSSMRVRESELKSELREKTALEGRIKEW 846

Query: 792  KKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQK 851
            K        L++     DLD K+ A+A GP+    ++L S +++ + +LN    +     
Sbjct: 847  KADITNFSALVK-----DLDAKI-ADAQGPI----DRLESQFHETQRELNANISQAQRTA 896

Query: 852  INFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRF 911
             +     + L  I   I+ Y   R+    KE  EK  + E+E++   ++ +E+   +   
Sbjct: 897  QDLNMSADKLDSINKTIERYVRERRGRSLKECNEKIEEHEAEIQKLGLQLEEVRNNIQLI 956

Query: 912  KDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLL 970
               +        N+ +NL  R  +  +    +EI+S++ E   K   +  F+ +      
Sbjct: 957  DKGISESGATVANLRENLRIRRLRQDIAATQAEIDSIDLEEAAKAKRI--FDEKYNVEKQ 1014

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            +  +L S+     G +S  Q  +   + D  Q  +KD+ K++ DQLI++K ++MAN DL+
Sbjct: 1015 KETQLQSKYAHIGGEISSLQAQLKTLQGD--QDDFKDVSKKYRDQLIRVKMSDMANNDLE 1072

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKV 1089
            +Y  ALD A+M++H++KMEE+N  +R LW +TY+G DID I+I S+ EG  T RSY+Y+V
Sbjct: 1073 KYAKALDNAIMKYHSLKMEEVNDTMRHLWNKTYQGTDIDGIKISSEGEGGATKRSYNYRV 1132

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
            +M     E++MRGRCSAGQK+LAS+IIRLALA++F  NCGILALDEPT  LD  N ++LA
Sbjct: 1133 VMTKDQVEMDMRGRCSAGQKMLASIIIRLALADSFGQNCGILALDEPTNALDTENIDALA 1192

Query: 1150 AALHRIMEDRKGQENFQLIVITHDE-RFA--------QLIGQRQHAEKYYRVAKDDHQHS 1200
            A+L  I+ +RK   NFQLI+IT     FA         +IG         RV++D  Q S
Sbjct: 1193 ASLVDIINERKSNSNFQLIIITMTRTSFASWARAMSWSIIGM------LTRVSRDSRQKS 1246

Query: 1201 IIE 1203
            IIE
Sbjct: 1247 IIE 1249


>gi|395504380|ref|XP_003756530.1| PREDICTED: DNA repair protein RAD50 [Sarcophilus harrisii]
          Length = 1312

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 376/1269 (29%), Positives = 656/1269 (51%), Gaps = 147/1269 (11%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++ + ++Q   +K  + +L+ L+  K+ A ++R+ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRLVRQNQTGRVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
               + +  + K  ++  +  +  +   +   E  L  + ++ + I  + +R+    +Q +
Sbjct: 228  VSKEAQLASSKEFVKSYDNELGPLKIHLKEIEQNLSKIVRLDNDIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE +  + + K L    
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDMYHNHQRTVREKERRLIDCQRELDRTNKESKLLNHEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L     APF+     NF   ++  
Sbjct: 344  SELLVEQGRLQLQADRHQQNIRARDSLIQSLATHLELDGFERAPFNERQIKNFQKLVK-- 401

Query: 298  LSDLE-RDLE-DKKKSDELALK--MAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKE 353
              D+E R+ E +++  ++ A K  M      +  D+   +E   + K+EI++     +K 
Sbjct: 402  --DIEERETEANRRMMNDFAGKESMKQKQIDEIRDKKTGLERIVELKLEIQSKKQTELKN 459

Query: 354  KENERDSFELQISNLNLSHIDERENKMRI---EVERKTNQLA-EREFEINIRQKQSELFA 409
             + E    EL+ S+  +  +D+   K  +   + E  +N  A + E    +R+K      
Sbjct: 460  VKYELQ--ELEGSSDRILELDQELGKTELALGKAEENSNVAALKEELPTLLREKGD---- 513

Query: 410  MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPL 469
            +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P 
Sbjct: 514  LDRSLRKLDQEMEQLNHHTMTRTQMEMLTRDKADKDEQIRKIKSRHNDELTSLL-GYFPN 572

Query: 470  DRDLK-------KEITQALRALLTEFD-DLSSKSREADKEVNMLQMKIQEVTDNLSKHRK 521
             + L+       KEI Q  R  L +F+ +L+S    A++  N +  ++++  + LSK+  
Sbjct: 573  KKQLEDWLHSKSKEINQT-RDRLAKFNKELAS----AEQNKNHINNELKQKEEQLSKYED 627

Query: 522  ---DVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF 578
               DV   + F ES L+ L      +D  +K   S+K++  +  +    +  + Q+ D  
Sbjct: 628  KLFDVCGSQDF-ESDLDKL------MDEIEK---SSKQRAMLAGATAVYSQFITQLTDE- 676

Query: 579  ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
                     CP C+R F  E E  + +   + K   + + +K    E    +    ++  
Sbjct: 677  -----NQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKRREKRRDEMMG 731

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
            L+ + +  + L +  IP     L  +  ++       ++   +L  I  ++ES +  +  
Sbjct: 732  LKPIRQNIIDLKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTIIPEEESAKACLTD 791

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELS------GSLSTKDN 748
            V   +RL  E++  ++++      L    QGV   RT++++  E         ++S+K  
Sbjct: 792  VTIMERLQMELRDVERKIAQQAAKL----QGVDLDRTVQQVNQEKQEKQHRLDTVSSKIE 847

Query: 749  LQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL 808
            L  +L  ++D+Q  +++  S +    + L+ EK++ ++ L+  ++ EE+   L  E   L
Sbjct: 848  LNRKL--IQDQQEQIQHLKSTV----NELKSEKLQISSNLQRRQQLEEQTVELSTEVQSL 901

Query: 809  -----DLDEKL--LAEASGPLSKEKEKLLSDYND----LKVKLNREYEEQAEQKINFQQE 857
                 D  E+L  L    G L +EKE+L+   N     ++ KLN + +E+ +   ++ ++
Sbjct: 902  HREIKDSKEQLYPLEATLGKLQQEKEELIKKKNTSISAVQEKLN-DIKEKVKNISSYMKD 960

Query: 858  IEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRN 917
            IE  ++     K+ Y ++ +    ++        S++  C+ + D+I  E+   +  +  
Sbjct: 961  IENYIQDG---KDNYKMQNEAELNKVI-------SQLNECEKQKDKISKEMGTMRQDIDM 1010

Query: 918  QDQIRRNIEDNLNYRE-------------------TKAKVDKFASEIESLEERVLKIGGV 958
            Q    R ++DNL  R+                    + +V +  +E ++LEE++      
Sbjct: 1011 QKVQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQLKNEYQALEEKI------ 1064

Query: 959  STFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQ 1018
               ET      L+R+  L+ + R +G    Y+  I   K +L++ Q+ D ++++ + +I 
Sbjct: 1065 ---ET------LKRNHSLA-LGRQKG----YEEEIIHFKRELREPQFSDAEEKYREMMIV 1110

Query: 1019 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-- 1076
            ++TTE+ NKDLD YY ALD A+M+FH MKMEEINKIIR+LW+ TYRGQDI+YI I SD  
Sbjct: 1111 MRTTELVNKDLDIYYKALDHAIMKFHGMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDTD 1170

Query: 1077 ---SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1133
               S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILAL
Sbjct: 1171 ENISASDKRRNYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1230

Query: 1134 DEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVA 1193
            DEPTTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ 
Sbjct: 1231 DEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIR 1290

Query: 1194 KDDHQHSII 1202
            K+  Q S I
Sbjct: 1291 KNIDQCSEI 1299


>gi|302653707|ref|XP_003018676.1| hypothetical protein TRV_07308 [Trichophyton verrucosum HKI 0517]
 gi|291182336|gb|EFE38031.1| hypothetical protein TRV_07308 [Trichophyton verrucosum HKI 0517]
          Length = 1233

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 379/1237 (30%), Positives = 612/1237 (49%), Gaps = 108/1237 (8%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 54   GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 113

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 114  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 173

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAE---EIE 192
            L K ++ + D      L  K  ++ +     + A      E +  Q +   L +   E++
Sbjct: 174  LSKEMRRVAD------LADKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVD 227

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            ++DE L++    FE   A+ ++    L +EK  MD K + +EQN      + T    E G
Sbjct: 228  ESDEWLRSTLEQFESRQAEYQNQEESL-KEKY-MDLK-ELIEQNRHKLGLKQT----ECG 280

Query: 253  ------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE 306
                  A   R  ER   + K  AR N     +         +F++RI+    +  + LE
Sbjct: 281  KNENDKAQFDRQVERRVRLIKDIARQNNFRGFDGDLDEMEINDFMDRIQKLTKERNQALE 340

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              K+  +  LK       DA      +  +K A  E+K    K I   + E D+ + +I 
Sbjct: 341  KAKREAQNQLK-------DAQTLLNQLSQRKSALQEVKNAAKKQISMNDKEADTIQRRID 393

Query: 367  NLNLSH-----IDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREK 421
             +++       I+ R  +    +E++ ++     +E +I++  +EL  +++K   LN E 
Sbjct: 394  EMDVDEGKRAVIEARMEETEKNLEKEKDKAKNASWESDIQKNDTELRLLEEKSSKLNAEL 453

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQAL 481
                  + D  +L   K EL++ ++  + +   + D+I  ++             I Q  
Sbjct: 454  IQGTKKAGDLARLDHLKKELKDRERSLETMSSAHGDRISKLVDSSWS-----PSSIEQRY 508

Query: 482  RALLTEFDDL-SSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDV-DSKKRFIESKLES 536
            + +L E   L ++  RE D   KE+ ++  K++ V  NL +H  DV ++ K+  E+  + 
Sbjct: 509  QDVLKEASTLVTTAERERDGTGKELELIDFKLKNVRKNLQQHSADVENAAKKINETIGDE 568

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
              +   ++   Q  LD A++  D    +Y    G+ +  +     A    VC  C RPF 
Sbjct: 569  PEEYPHTVKQKQTELDMARKDAD----QYA---GLGEYLNKCLDAANDKKVCRTCARPFK 621

Query: 597  AEEEDEFVK---KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETI 653
             E E +  K   K  +K A+  +   V  +E+  AD   + +  +   YE +++L+   I
Sbjct: 622  TESELQIFKNKLKALIKKATDEDV--VAEIEAREAD--LENVRGVGTFYETWIRLTGTDI 677

Query: 654  PVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQK 713
            P  +K    L  E +      ++   ++ Q    K  +E L + V T  R   EI   Q 
Sbjct: 678  PALKKEQSGLETEREGVLAKLEEHDRIVDQRVESKRDIESLSKNVTTISRYNNEILTLQT 737

Query: 714  QVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIR 773
            Q+ DL    D  G   RT+E+IQ E++       +L+    KL  E      D+  ++++
Sbjct: 738  QIQDLSAKQDETGTS-RTLEDIQDEIATLGENARSLKRISSKLTHELNQSRVDVGKLELK 796

Query: 774  WHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDY 833
                          LRD+++  + +   +E+K  L      + E     SK++E + +  
Sbjct: 797  --------------LRDLRRELDNVNFELEKKATL---VSRVEEYRNQNSKQRETIENAD 839

Query: 834  NDLK------VKLNREYEE---QAEQK-INFQQEIEML------LKIASK-IKEYYDLRK 876
            ND++       K    YE+   + EQ+    QQE+  L      L +AS+ I  Y     
Sbjct: 840  NDIEGLVPEVSKAQARYEDISARGEQREKELQQEVSGLNDSLHQLDLASEDITNYI---- 895

Query: 877  DERFKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
             ER    Q ++S+ E      E+KS +    ++  EL+     +++ +  +R   DNL Y
Sbjct: 896  -ERGGPAQLERSKRELQNILDEIKSLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRY 954

Query: 932  RETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQT 991
            R+    +     EI  LE +  ++   S F+ E  ++  E + L ++     G M     
Sbjct: 955  RQESKALINVNREIADLESQNAEVDR-SRFKEESERNTREHNALAAKQASKMGEMKSKDD 1013

Query: 992  NISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEI 1051
             + +   D     YKD   +  +  I+++TT+ A +DL RY  ALDKA+MR+H +KMEEI
Sbjct: 1014 QLMQLLADW-NTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMRYHGLKMEEI 1072

Query: 1052 NKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKV 1110
            N+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKV
Sbjct: 1073 NRIIGELWQKTYRGTDVDTILIRSDNESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQKV 1132

Query: 1111 LASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVI 1170
            LAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVI
Sbjct: 1133 LASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVI 1192

Query: 1171 THDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            THDE F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1193 THDEEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1229


>gi|198401788|gb|ACH87544.1| Rad50 [Platynereis dumerilii]
 gi|198401793|gb|ACH87548.1| Rad50 [Platynereis dumerilii]
          Length = 1229

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 373/1251 (29%), Positives = 622/1251 (49%), Gaps = 175/1251 (13%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +++K ++ VL+  +   GE V ++ R AD++RE+P+L+GVSKAILENVIF HQ+E+NWPL
Sbjct: 109  VQFKTLDGVLRK-SLADGEHVDITSRHADLNREIPSLLGVSKAILENVIFCHQEESNWPL 167

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +   LK+KFDDIF+ +R+  AL+ I+KL       ++  K  L   + L +A    R+S
Sbjct: 168  SEGKALKQKFDDIFATSRFGDALDEIRKLR------MRKVKGDLNEAEVLLEAT---RDS 218

Query: 121  ISQDQEKTEALK----------NQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMT 170
            I++  E  E LK          N + EL++ +  +  +   +E T KDLRK   ++ T T
Sbjct: 219  IAKIDENIEPLKTKLRKINEKQNSIYELQRKVDALRFQKKESEQTQKDLRKNIKKLFTGT 278

Query: 171  ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
             R                        EL+    +F+ IV  +E +++KL+ E N  + K+
Sbjct: 279  TR------------------------ELEQQLRDFKEIVEAKEEELAKLKTELNKTEDKL 314

Query: 231  KFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNF 290
            +           E   L  E   H+  + +RD T++ +  R+ +             L F
Sbjct: 315  EECGMQKSEILLEHGKLEQEQKQHLENVKKRDQTVKNVAGRYGI-------------LGF 361

Query: 291  INRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI---KAGI 347
             +       DLE D  D +K  E  L+     YLD++         KQ K E    +  I
Sbjct: 362  SD-------DLEDD--DIQKFKE-KLEAKCKEYLDSS---------KQVKAEFDKKERDI 402

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
             K + E   E+                    KM  E+  K + + +   EI  ++   EL
Sbjct: 403  QKKVDEARGEK-------------------TKMETELTMKRDTMEKNTAEI--KKLGKEL 441

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAE--LENHKKKHKKIIDEYKDKIRDVLKG 465
                Q++ A        + DS + VK  L++AE  LE+ +K     +DE K  I+ + + 
Sbjct: 442  ----QRVDA--------SADSLNTVKNDLRRAEKDLEDLEKSLN--VDELKGDIKTMQED 487

Query: 466  RLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
            +L LDR LK         L  E D L+ K  EA  +++M +       D + K ++    
Sbjct: 488  KLELDRKLKN--------LEYELDQLA-KDSEARTQLDMFKKDKTSKQDQIRKMQQRQKK 538

Query: 526  KKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF-ERVARA 584
            ++   + K + LN     I+ +   L   + K   ++   ++  G   +   + E++ + 
Sbjct: 539  EQEVTKYKEQFLNI-CNGIENFDGELTQTETKIKQKREDLSLVQGTLVVLKKYIEKLRKD 597

Query: 585  HHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
               CP C R F A+ E DE ++    K  +    M  ++     +   + ++ +L+ V  
Sbjct: 598  DAPCPLCRRNFDAQSEIDELIRDLEDKMENLPSKMTSVNRVIKESQEKYDKMQQLKPVRA 657

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP-VETAD 702
              V L  + +P  +     +  ++        ++   L ++K + ES+   +QP + + D
Sbjct: 658  NVVDLDSKELPTLKDRQQSIENQMKTLKSDIAEMTETL-EMKQNDESMARRIQPDLNSID 716

Query: 703  RLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRY 762
            R   EI+       DL+  + ++            +L+GS S + ++++   + +D Q  
Sbjct: 717  RFNMEIK-------DLDRKISTQSN----------KLTGSSSDR-SVKDVNSERQDLQLI 758

Query: 763  MENDLSNIQ-----IRWHT------------LREEKVKAANTLRDVKKAEEELEHLMEEK 805
            +EN  S I+     I  HT            L+ +K+   N ++  +K EE+ E LM E 
Sbjct: 759  VENKNSEIEHKRKKINDHTEHRHKLSGEVNDLKSQKLAIENDVQQRQKLEEKRESLMAEN 818

Query: 806  GQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIA 865
              L ++ +    A  P+ ++ +KL+++ +++    + ++E++ E+    +     +  + 
Sbjct: 819  DFLCVEIQDTEGAIEPVQEKIDKLMTEKSEIVKTRDSKFEQEKEKFTQAKTSQREITSLD 878

Query: 866  SKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNI 925
              IK Y    +D+  ++ ++K  + E + +  + +   +  ++   ++ + +Q    R +
Sbjct: 879  ETIKVYLSKGRDKVLQQNEKKMKKIEDDAQYLETQRQSVNEKMTEIQEDLHSQKFKEREL 938

Query: 926  EDNLNYRETKAKVDKFASEIESLEERVLKIGGV--STFETELGKHLLERDRLLSEVNRCQ 983
            +DNL  +E + +  K   +I+ LE+    +GG+  +T E +  K   E + L  E N+  
Sbjct: 939  KDNLTLKEKEEQCGKLDVDIKKLED---DLGGLEATTLEQDRLKLNKEYNDLDREKNQLL 995

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G++  +Q  I RNK  LK   ++D +K+  D LI LKTTEMA  DL++YY ALD+ +M +
Sbjct: 996  GSLRGHQDTIQRNKDRLKGDLFRDAEKKFQDSLITLKTTEMACSDLEKYYKALDRTIMSY 1055

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GAGT----RSYSYKVLMQTGDAEL 1098
            H  KM EINKIIRELW+ TY+G DI+ I I S+ E G+G     RSY+Y+V+M  GD  +
Sbjct: 1056 HQKKMSEINKIIRELWRNTYKGHDIETIEIRSNEEEGSGAAAKRRSYNYRVVMLKGDTPI 1115

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ 
Sbjct: 1116 DMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAGALVDIIKS 1175

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            R GQ NFQL+VITHDE F +L+G+  + + +++V K+ + HS +    I D
Sbjct: 1176 RSGQSNFQLVVITHDEDFVELLGRSDYVDYFFKVKKNKNGHSELSKTSIQD 1226


>gi|332821874|ref|XP_003310856.1| PREDICTED: DNA repair protein RAD50 [Pan troglodytes]
 gi|397518343|ref|XP_003829351.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Pan paniscus]
          Length = 1173

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 349/1206 (28%), Positives = 621/1206 (51%), Gaps = 91/1206 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K Y+++L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + K+ ++I  + +R+    +Q +K  + L E++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMKLDNEIKALDSRK----KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +    RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R      ER   + K +++L    A    L    + K I
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEGEAKTANQLMNDFAEKETL----KQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERK 387
            +  +  K      +E+K+ IL   K+ E +   +ELQ    +   I E + ++ I+ ER 
Sbjct: 291  DEIRDKKTGLGRIIELKSEILSK-KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER- 347

Query: 388  TNQLAEREFEINIRQKQSELFAM-------DQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              +L++ E   N+   + E+ ++       D+ ++ L++E + L   +  R ++ +   +
Sbjct: 348  --ELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKD 405

Query: 441  LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADK 500
              +  ++ +KI   + D++  +L G  P  + L+              D L SKS    K
Sbjct: 406  KADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS----K 446

Query: 501  EVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSA 554
            E+N  + ++ ++   L+   +++  ++++ +  E +L S   ++F +     ++  LD  
Sbjct: 447  EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRL 506

Query: 555  KEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKA 611
            KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   + K 
Sbjct: 507  KEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKL 566

Query: 612  ASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
              + + +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +  
Sbjct: 567  RLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLK 626

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QG 728
               ++   +L  I  ++ES +V +  V   +R       +Q ++ D+E  +  +    QG
Sbjct: 627  NDIEEQETLLGTIMPEEESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQG 679

Query: 729  V---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
            +   RT++++  E        D + +++E  R   +  +  + +++   + L+ EK++ +
Sbjct: 680  IDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS 739

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
              L+  ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N    
Sbjct: 740  TNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-N 798

Query: 846  EQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
            + A+ K+N  +++++ +      I+ Y    KD+  K+ + + ++  +++  C+   ++I
Sbjct: 799  KIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKI 858

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFET 963
              ++   +  +  Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + 
Sbjct: 859  NEDMRIMRQDIDTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQM 914

Query: 964  ELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +     LE   D +    N   G    Y+  I   K +L++ Q++D ++++ + +I ++T
Sbjct: 915  KSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRT 974

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----- 1076
            TE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     
Sbjct: 975  TELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENV 1034

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            S     RSY+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEP
Sbjct: 1035 SASDKRRSYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP 1094

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+ 
Sbjct: 1095 TTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNI 1154

Query: 1197 HQHSII 1202
             Q S I
Sbjct: 1155 DQCSEI 1160


>gi|5739043|gb|AAD50326.1|AF057300_1 truncated RAD50 protein [Homo sapiens]
 gi|119582734|gb|EAW62330.1| RAD50 homolog (S. cerevisiae), isoform CRA_c [Homo sapiens]
          Length = 1173

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 348/1206 (28%), Positives = 621/1206 (51%), Gaps = 91/1206 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K Y+++L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + K+ ++I  + +R+    +Q +K  + L E++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMKLDNEIKALDSRK----KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +    RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R      ER   + K +++L    A    L    + K I
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEGEAKTANQLMNDFAEKETL----KQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERK 387
            +  +  K      +E+K+ IL   K+ E +   +ELQ    +   I E + ++ I+ ER 
Sbjct: 291  DEIRDKKTGLGRIIELKSEILSK-KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER- 347

Query: 388  TNQLAEREFEINIRQKQSELFAM-------DQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              +L++ E   N+   + E+ ++       D+ ++ L++E + L   +  R ++ +   +
Sbjct: 348  --ELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKD 405

Query: 441  LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADK 500
              +  ++ +KI   + D++  +L G  P  + L+              D L SKS    K
Sbjct: 406  KADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS----K 446

Query: 501  EVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSA 554
            E+N  + ++ ++   L+   +++  ++++ +  E +L S   ++F +     ++  LD  
Sbjct: 447  EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRL 506

Query: 555  KEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKA 611
            KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   + K 
Sbjct: 507  KEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKL 566

Query: 612  ASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
              + + +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +  
Sbjct: 567  RLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLK 626

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QG 728
               ++   +L  I  ++ES +V +  V   +R       +Q ++ D+E  +  +    QG
Sbjct: 627  NDIEEQETLLGTIMPEEESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQG 679

Query: 729  V---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
            +   RT++++  E        D + +++E  R   +  +  + +++   + L+ EK++ +
Sbjct: 680  IDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS 739

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
              L+  ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N    
Sbjct: 740  TNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-N 798

Query: 846  EQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
            + A+ K+N  +++++ +      I+ Y    KD+  K+ + + ++  +++  C+   ++I
Sbjct: 799  KIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKI 858

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFET 963
              ++   +  +  Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + 
Sbjct: 859  NEDMRLMRQDIDTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQM 914

Query: 964  ELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +     LE   D +    N   G    Y+  I   K +L++ Q++D ++++ + +I ++T
Sbjct: 915  KSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRT 974

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----- 1076
            TE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     
Sbjct: 975  TELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENV 1034

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEP
Sbjct: 1035 SASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP 1094

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+ 
Sbjct: 1095 TTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNI 1154

Query: 1197 HQHSII 1202
             Q S I
Sbjct: 1155 DQCSEI 1160


>gi|426349899|ref|XP_004042522.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Gorilla gorilla
            gorilla]
          Length = 1173

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 348/1206 (28%), Positives = 621/1206 (51%), Gaps = 91/1206 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K Y+++L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + K+ ++I  + +R+    +Q +K  + L E++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMKLDNEIKALDSRK----KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +    RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R      ER   + K +++L    A    L    + K I
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEGEAKTANQLMNDFAEKETL----KQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERK 387
            +  +  K      +E+K+ IL   K+ E +   +ELQ    +   I E + ++ I+ ER 
Sbjct: 291  DEIRDKKTGLGRIIELKSEILSK-KQSELKNVKYELQQLEGSSDRILELDQEL-IKAER- 347

Query: 388  TNQLAEREFEINIRQKQSELFAM-------DQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              +L++ E   N+   + E+ ++       D+ ++ L++E + L   +  R ++ +   +
Sbjct: 348  --ELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKD 405

Query: 441  LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADK 500
              +  ++ +KI   + D++  +L G  P  + L+              D L SKS    K
Sbjct: 406  KADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS----K 446

Query: 501  EVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSA 554
            E+N  + ++ ++   L+   +++  ++++ +  E +L S   ++F +     ++  LD  
Sbjct: 447  EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRL 506

Query: 555  KEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKA 611
            KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   + K 
Sbjct: 507  KEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKL 566

Query: 612  ASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
              + + +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +  
Sbjct: 567  RLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLK 626

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QG 728
               ++   +L  I  ++ES +V +  V   +R       +Q ++ D+E  +  +    QG
Sbjct: 627  NDIEEQETLLGTIMPEEESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQG 679

Query: 729  V---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
            +   RT++++  E        D + +++E  R   +  +  + +++   + L+ EK++ +
Sbjct: 680  IDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS 739

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
              L+  ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N    
Sbjct: 740  TNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-N 798

Query: 846  EQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
            + A+ K+N  +++++ +      I+ Y    KD+  K+ + + ++  +++  C+   ++I
Sbjct: 799  KIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKI 858

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFET 963
              ++   +  +  Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + 
Sbjct: 859  NEDMRIMRQDIDTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQM 914

Query: 964  ELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +     LE   D +    N   G    Y+  I   K +L++ Q++D ++++ + +I ++T
Sbjct: 915  KSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRT 974

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----- 1076
            TE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     
Sbjct: 975  TELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENV 1034

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEP
Sbjct: 1035 SASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP 1094

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+ 
Sbjct: 1095 TTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNI 1154

Query: 1197 HQHSII 1202
             Q S I
Sbjct: 1155 DQCSEI 1160


>gi|395736146|ref|XP_003776708.1| PREDICTED: DNA repair protein RAD50 isoform 3 [Pongo abelii]
          Length = 1173

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 348/1206 (28%), Positives = 621/1206 (51%), Gaps = 91/1206 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K Y+++L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + K+ ++I  + +R+    +Q +K  + L E++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMKLDNEIKALDSRK----KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +    RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R      ER   + K +++L    A    L    + K I
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEGEAKTANQLMNDFAEKETL----KQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERK 387
            +  +  K      +E+K+ IL   K+ E +   +ELQ    +   I E + ++ I+ ER 
Sbjct: 291  DEIRDKKTGLGRIIELKSEILSK-KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER- 347

Query: 388  TNQLAEREFEINIRQKQSELFAM-------DQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              +L++ E   N+   + E+ ++       D+ ++ L++E + L   +  R ++ +   +
Sbjct: 348  --ELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKD 405

Query: 441  LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADK 500
              +  ++ +KI   + D++  +L G  P  + L+              D L SKS    K
Sbjct: 406  KADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS----K 446

Query: 501  EVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSA 554
            E+N  + ++ ++   L+   +++  ++++ +  E +L S   ++F +     ++  LD  
Sbjct: 447  EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRL 506

Query: 555  KEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKA 611
            KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   + K 
Sbjct: 507  KEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKL 566

Query: 612  ASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
              + + +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +  
Sbjct: 567  RLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLK 626

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QG 728
               ++   +L  I  ++ES +V +  V   +R       +Q ++ D+E  +  +    QG
Sbjct: 627  NDIEEQETLLGTIMPEEESAKVCLTDVTMMER-------FQMELKDVERKIAQQAAKLQG 679

Query: 729  V---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
            +   RT++++  E        D + +++E  R   +  +  + +++   + L+ EK++ +
Sbjct: 680  IDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS 739

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
              L+  ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N    
Sbjct: 740  TNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-N 798

Query: 846  EQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
            + A+ K+N  +++++ +      I+ Y    KD+  K+ + + ++  +++  C+   ++I
Sbjct: 799  KIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKI 858

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFET 963
              ++   +  +  Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + 
Sbjct: 859  NEDMRIMRQDIDTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQM 914

Query: 964  ELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +     LE   D +    N   G    Y+  I   K +L++ Q++D ++++ + +I ++T
Sbjct: 915  KNEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRT 974

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----- 1076
            TE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     
Sbjct: 975  TELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENV 1034

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEP
Sbjct: 1035 SASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP 1094

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+ 
Sbjct: 1095 TTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNI 1154

Query: 1197 HQHSII 1202
             Q S I
Sbjct: 1155 DQCSEI 1160


>gi|326476317|gb|EGE00327.1| DNA repair protein Rad50 [Trichophyton tonsurans CBS 112818]
          Length = 1326

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 383/1239 (30%), Positives = 617/1239 (49%), Gaps = 112/1239 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 120  GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 179

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 180  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 239

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAE---EIE 192
            L K ++ + D      L  K  ++ +     + A      E +  Q +   L +   E++
Sbjct: 240  LSKEMRRVAD------LADKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVD 293

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            ++DE L++    FE   A+ ++    L +EK  MD K + +EQN      + T    E G
Sbjct: 294  ESDEWLRSTLEQFESRQAEYQNQEESL-KEKY-MDLK-ELIEQNRHKLGLKQT----ECG 346

Query: 253  AH------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE 306
             H        R  ER   + K  AR N     +    +    +F++RI+    +  + LE
Sbjct: 347  KHENDKAQFDRQVERRVRLIKDIARQNNFRGYDGDLDDMEINDFMDRIQKLTKERNQALE 406

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              K+  +  LK       DA      +  +K A  E+K    K I   + E D+ + +I 
Sbjct: 407  KAKREAQSQLK-------DAQTLLNQLSQRKSALQEVKNAAKKQISMNDKEADTIQRRID 459

Query: 367  NLNLSH-----IDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREK 421
             +++       I+ R  +    +ER+ ++     +E +I++  +EL  +++K   LN E 
Sbjct: 460  EMDVDEGKRAVIEARMEETEKNLEREKDKAKNASWESDIQKNDTELRLLEEKASKLNAEL 519

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL-PLDRDLKKEITQA 480
                  + D  +L   K EL++ ++  + +   + D+I  ++     P D      I Q 
Sbjct: 520  IQGTKKAGDLARLDHLKKELKDRERSLETMSSAHGDRISKLVDSTWSPSD------IEQK 573

Query: 481  LRALLTEFDDL-SSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDV-DSKKRFIESKLE 535
             + +L E   L ++  RE D   KE+ +L  K++ V  NL +H  DV ++ K+  E+  +
Sbjct: 574  YQDVLKEASTLVTTAERERDGTGKELELLDFKLKNVRKNLQQHSADVENAAKKINETIGD 633

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
               +   +I   Q  LD A++  D    +Y    G+ +  +     A    VC  C RPF
Sbjct: 634  EPEEYPHTIKQKQTELDMARKDAD----QYA---GLGEYLNKCLDAANDKKVCRTCARPF 686

Query: 596  SAEEEDEFVK---KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKET 652
              E E +  K   K  +K A+  +   V  +E+  AD   + +  +   YE +++L+   
Sbjct: 687  KTESELQIFKNKLKALIKKATDED--VVAEIEAREAD--LENVRGMGTFYETWIRLTGTD 742

Query: 653  IPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQ 712
            IP  +K    L  E +      ++   ++ Q    K  +E L + V T  R   EI   Q
Sbjct: 743  IPALKKEQSGLEAEREGILAKLEEHDRIVDQRVESKRDIESLSKNVATISRYNNEILTLQ 802

Query: 713  KQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
             Q+ DL    +  G   RT+E+IQ E++       +L+    KL  E      D+  +++
Sbjct: 803  TQIQDLSAKQEETGTS-RTLEDIQDEITTLGEKTRSLKRVSSKLTHELNQSRVDVGKLEL 861

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
            +              LRD+++  + +   +E+K  L      + E     SK++E + + 
Sbjct: 862  K--------------LRDLRRELDNVNFELEKKATL---VSRVEEYRNQNSKQRETIENA 904

Query: 833  YNDLK------VKLNREYEE---QAEQK-INFQQEIEML------LKIASK-IKEYYDLR 875
             ND++       K    YE+   + EQ+    Q E+  L      L +AS+ I  Y    
Sbjct: 905  DNDIEDLIPEFSKAQARYEDISARGEQREKELQLEVSGLNDSLHQLDLASEDITNYI--- 961

Query: 876  KDERFKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLN 930
              ER    Q ++S+ E      E+K  +    ++  EL+     +++ +  +R   DNL 
Sbjct: 962  --EREGPAQLERSKRELQNILDEIKRLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLR 1019

Query: 931  YR-ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
            YR E+KA V+    EI  LE +  ++   S F+ E  ++  E + L ++     G M   
Sbjct: 1020 YRQESKALVN-VNREIADLESQNAEVDR-SRFKEESERNTREHNALAAKQASKMGEMKSK 1077

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
               + +   D     YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H +KME
Sbjct: 1078 DDQLMQLLADW-NTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGLKME 1136

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            EIN+II ELWQ+TYRG D+D I I SD+E + G RSY+Y+V M   DAE++MRGRCSAGQ
Sbjct: 1137 EINRIIGELWQKTYRGTDVDTILIRSDNESSRGNRSYNYRVCMVKQDAEMDMRGRCSAGQ 1196

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLI
Sbjct: 1197 KVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLI 1256

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            VITHDE F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1257 VITHDEEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1295


>gi|332221678|ref|XP_003259990.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Nomascus leucogenys]
          Length = 1174

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 342/1206 (28%), Positives = 619/1206 (51%), Gaps = 90/1206 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K Y+++L+ L+  K+ A ++R+ I+  + +  + K  ++  E  ++ + +++   E  L 
Sbjct: 65   KEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELEPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + ++ ++I  + +R+    +Q +K  + L E++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMRLDNEIKALDSRK----KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +    RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRTRDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R      ER   + K +++L    A    L    + K I
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEGEAKTANQLMNDFAEKETL----KQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERK 387
            +  +  K      +E+K+ IL   K+ E +   +ELQ    +   I E + ++ I+ ER 
Sbjct: 291  DEIRDKKTGLGRIIELKSEILSK-KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER- 347

Query: 388  TNQLAEREFEINIRQKQSELFAM-------DQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              +L++ E   N+   + E+ ++       D+ ++ L++E + L   +  R ++ +   +
Sbjct: 348  --ELSKAEKNSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKD 405

Query: 441  LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADK 500
              +  ++ +KI   + D++  +L G  P  + L+              D L SKS    K
Sbjct: 406  KADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS----K 446

Query: 501  EVNMLQMKIQEVTDNLS---KHRKDVDSKKRFIESKLESLNQQIFSI----DTYQKVLDS 553
            E+N  + ++ ++   L+   +++  ++++ +  E +L S   ++F +      ++  LD 
Sbjct: 447  EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGEFHHFESDLDR 506

Query: 554  AKEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVK 610
             KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +   + K
Sbjct: 507  LKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSK 566

Query: 611  AASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQK 670
               + + +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ + 
Sbjct: 567  LRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRL 626

Query: 671  SQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---Q 727
                ++   +L  I  ++ES +V +  V   +R       +Q ++ D+E  +  +    Q
Sbjct: 627  KNDIEEQETLLGTIMPEEESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQ 679

Query: 728  GV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKA 784
            G+   RT++++  E        D + +++E  R   +  +  + +++   + L+ EK++ 
Sbjct: 680  GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQI 739

Query: 785  ANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREY 844
            +  L+  ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N   
Sbjct: 740  STNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS- 798

Query: 845  EEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDE 903
             + A+ K+N  +++++ +      I+ Y    KD+  K+ + + ++  +++  C+   ++
Sbjct: 799  NKIAQDKLNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEK 858

Query: 904  ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFET 963
            I  +    +  +  Q    R ++DNL  R+   ++ +        ++ + ++G +   + 
Sbjct: 859  INEDRRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEE---ERKQHLKEMGQMQVLQM 915

Query: 964  ELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +     LE   D +    N   G    Y+  I   K +L++ Q++D ++++ + +I ++T
Sbjct: 916  KNEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRT 975

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----- 1076
            TE+ NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     
Sbjct: 976  TELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENV 1035

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            S     R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEP
Sbjct: 1036 SASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP 1095

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+ 
Sbjct: 1096 TTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNI 1155

Query: 1197 HQHSII 1202
             Q S I
Sbjct: 1156 DQCSEI 1161


>gi|302503516|ref|XP_003013718.1| hypothetical protein ARB_00169 [Arthroderma benhamiae CBS 112371]
 gi|291177283|gb|EFE33078.1| hypothetical protein ARB_00169 [Arthroderma benhamiae CBS 112371]
          Length = 1275

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 376/1234 (30%), Positives = 609/1234 (49%), Gaps = 102/1234 (8%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 56   GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 115

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 116  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 175

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAE---EIE 192
            L K ++ + D      L  K  ++ +     + A      E +  Q +   L +   E++
Sbjct: 176  LSKEMRRVAD------LADKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVD 229

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            ++DE L++    FE   A+ ++    L +EK  MD K + +EQN      + T    E G
Sbjct: 230  ESDEWLRSTLEQFESRQAEYQNQEESL-KEKY-MDLK-ELIEQNRHKLGLKQT----ECG 282

Query: 253  ------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE 306
                  A   R  ER   + K  AR N     +         +F++RI+    +  + LE
Sbjct: 283  KNENDKAQFDRQVERRVRLIKDIARQNNFRGFDGDLDEMEINDFMDRIQKLTKERNQALE 342

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              K+  +  LK       DA      +  +K A  E+K    K I   + E D+ + +I 
Sbjct: 343  KAKREAQNQLK-------DAQTLLNQLSQRKSALQEVKNAAKKQISMNDKEADTIQCRID 395

Query: 367  NLNL---------SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKAL 417
             +++         + ++E EN +  E ++  N      +E +I++   EL  ++++   L
Sbjct: 396  EMDVDEGKRAVIEARMEETENYLEKEKDKAKNA----SWESDIQKNDIELRLLEEQSSKL 451

Query: 418  NREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
            N E       + D  +L   K EL++ ++  + +   + D+I  ++             I
Sbjct: 452  NAELIQGTKKAGDLARLDHLKKELKDRQRSLETMSSAHGDRISKLVDSSWS-----PSNI 506

Query: 478  TQALRALLTEFDDL-SSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDV-DSKKRFIES 532
             Q  + +L E   L ++  RE D   KE+ ++  K++ V  NL +H  DV ++ K+  E+
Sbjct: 507  EQRYQDVLKEASTLVTAAERERDGTGKELELIDFKLKNVRKNLQQHSADVENAAKKINET 566

Query: 533  KLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCE 592
              +   +   ++   Q  LD A++  D    +Y    G+ +  +     A    VC  C 
Sbjct: 567  IGDEPEEYPHTVKQKQTELDMARKDAD----QYA---GLGEYLNMCLDAANDKKVCRTCA 619

Query: 593  RPFSAEEEDEFVK---KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS 649
            RPF  E E +  K   K  +K A+  +   V  +E+  A+   + +  +   YE +++L+
Sbjct: 620  RPFKTESELQIFKNKLKALIKKATDEDV--VAEIEAREAE--LENVRGVGTFYETWIRLT 675

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQ 709
               IP  +K    L  E +      ++   ++ Q    K  +E L + V T  R   EI 
Sbjct: 676  GTDIPALKKEQSGLETEREGVLAKLEERDRIVDQRVESKRDIESLSKNVATISRYNNEIL 735

Query: 710  LWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSN 769
              Q Q+ DL    D  G   RT+E+IQ E++       +L+    KL  E      D+  
Sbjct: 736  TLQTQIQDLSAKQDETGTS-RTLEDIQDEIATLGEKARSLKRISSKLTHELNQSRVDVGK 794

Query: 770  IQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG---PLSKEK 826
            ++++   LR E     N   +++K    +  + E + Q     +++  A      L  E 
Sbjct: 795  LELKLRDLRRE---LDNVNFELEKKATLVSRVEEYRNQNSKQREIIENADNDIEGLVPEV 851

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASK-IKEYYDLRKDER 879
             K  + Y D+  +      EQ E+++  QQE+  L      L +AS+ I  Y      ER
Sbjct: 852  SKAQARYEDISAR-----GEQREKEL--QQEVSGLNDSLHQLDLASEDITNYI-----ER 899

Query: 880  FKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRET 934
                Q ++S+ E      E+K+ +    ++  EL+     +++ +  +R   DNL YR+ 
Sbjct: 900  GGPAQLERSKRELQNILDEIKTLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRYRQE 959

Query: 935  KAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNIS 994
               +     EI  LE +  ++   S F+ E  ++  E + L ++     G M      + 
Sbjct: 960  SKALINVNREIADLESQNAEVDR-SRFKEESERNTREHNALAAKQASKMGEMKSKDDQLM 1018

Query: 995  RNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKI 1054
            +   D     YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H +KMEEIN+I
Sbjct: 1019 QLLADW-NTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGLKMEEINRI 1077

Query: 1055 IRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLAS 1113
            I ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVLAS
Sbjct: 1078 IGELWQKTYRGTDVDTILIRSDNESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLAS 1137

Query: 1114 LIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHD 1173
            +IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHD
Sbjct: 1138 IIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVITHD 1197

Query: 1174 ERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            E F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1198 EEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1231


>gi|449548873|gb|EMD39839.1| hypothetical protein CERSUDRAFT_63389 [Ceriporiopsis subvermispora B]
          Length = 1261

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 372/1262 (29%), Positives = 620/1262 (49%), Gaps = 172/1262 (13%)

Query: 1    MEYKAIESVLQ---TINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
            M  K +ES+L          G++  +S +CA+MD E+P L+GVSKA+LENVIF HQ+++ 
Sbjct: 108  MTMKTLESILALADKTGGREGKRGVISTKCAEMDTEIPHLLGVSKAVLENVIFCHQEDSY 167

Query: 58   WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
            WPL +PSTLKKKFDDIF AT+Y+KAL+ IK L KD+  E+K  K +L+ L   K  A KL
Sbjct: 168  WPLSEPSTLKKKFDDIFEATKYSKALDSIKALRKDRVAELKVEKERLDGLSREKARADKL 227

Query: 118  RE-------SISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMT 170
                     +I+  + + E LK Q + L K+ Q   D       +    R++  ++  +T
Sbjct: 228  NNRKSDLNCTIAAKEIEYEELKKQYELLVKANQKFYD-------SATKFREIYLKVEDLT 280

Query: 171  ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRE----SDISKLEREKNDM 226
             +R+   E+  +    L +E++ +DEEL +   NF+  +A+++    S+ SKL+  ++D+
Sbjct: 281  KQRARYQEELDETRETL-QELDGSDEELADRMKNFDAHIARQKQKQLSENSKLQAIEDDL 339

Query: 227  ----DTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPF 282
                +T +K    +ID         L+E  +   R+ + +  I+++ A+H +     +P 
Sbjct: 340  KSARETHVKL---SIDQ-----GEYLAEEKSQEQRIKDCEGLIREISAKHQIKGYDVSPL 391

Query: 283  SNEAALNFINRIRSRLSDLERDLEDKKKSDELA--LKMAWDSY------LDAN-DRWKNI 333
              +  L+FI    S L DL +     K++D L        D Y      L  N DR K  
Sbjct: 392  GRDKTLDFI----SLLGDLLQ--RQHKETDRLQEEANGHTDEYNRNSRQLQMNLDRLK-- 443

Query: 334  EAQKQAKMEIKAGILK---HIKEKENERD---SFELQISNLNLSHIDERENKMRIEVERK 387
              Q++A +  +   L+   H  E E E     + EL+    ++  I+ R  K R E+E+ 
Sbjct: 444  --QERATLHDRVTSLQEKIHNTEIEVEAAQALTAELRTLKADMEEIEHRIKKSREEIEKA 501

Query: 388  T--NQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHK 445
                 LAE+    N + K  EL     K + LN E    +  +E R +L LKK EL+   
Sbjct: 502  KYDEHLAEK----NTKAKNLEL-----KREVLNAELSKTSAQAEARARLDLKKTELKGKS 552

Query: 446  KKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNML 505
             + K I++    + R ++ G       +++E+ +       E  DL  +S  A++ + + 
Sbjct: 553  AEVKNILNVNSARFRKLV-GSEAQPETMEQELDRVFSRKERECVDLEKQSAAANQSLQVA 611

Query: 506  QMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKY 565
            Q ++  +   L          K+F                             D+ K+  
Sbjct: 612  QTELTNLRREL----------KQFC----------------------------DIGKN-- 631

Query: 566  NIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES 625
               DG   +F  F +V +    CP C R     E   F K       SS E       E 
Sbjct: 632  ---DGAHGIFKHFLQVGQVKRNCPLCSRDMDVSELATFEK------TSSPEATARFQSEL 682

Query: 626  SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIK 685
            +  +   + L  L        KL  E +P+    + E  EEL       +++   L  +K
Sbjct: 683  TEWEQCLRDLQSLTTYSVSSSKLRSE-VPMLIAKVEEKEEELPILIGKAEELQERLNFMK 741

Query: 686  ADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELS---GS 742
             + + +  L Q      R  ++++  ++++ DLE  L   G  ++++++I+ EL    G 
Sbjct: 742  RELKDMSNLRQQATVVSRTQRDVERLEREIKDLERTLSDAG-SLKSVQDIERELDSVVGE 800

Query: 743  LSTKDNLQNELEKLRDEQ----RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEEL 798
            L   D  +  L   RD Q    R  EN+L  +Q+R   L        + LRD    E  +
Sbjct: 801  LRANDRERQNLMTERDRQMSAVRTHENELHGMQLRHSELN-------SRLRDRSALERRI 853

Query: 799  EHLMEEKGQLD-----LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN 853
            E + ++    +     LD K++ EA  P+ + +E+    + +L  +L     +QA Q +N
Sbjct: 854  EDMRQDITSANARIKELDGKII-EAQAPIDQLEEQYHLSHRELTSRLAEA--QQASQALN 910

Query: 854  FQQE-IEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
               + ++M  K   +++ Y   ++  R KE + + ++ E  ++   +R +     +   +
Sbjct: 911  ADSDRLQMNHK---QVERYIRDKRHLRLKECEARINEYEERIQDLSLRAEAARQVISLIE 967

Query: 913  DIVRNQDQIRRNIEDNLNYRE-------TKAKVDKFASEIESLEERVLKIGGVSTFETEL 965
              +        N+  N+  R        T+A+++ F  E  +  +R+ +           
Sbjct: 968  KEINESGASMANLRANIRVRRLLRDIAATEAEINSFDMEEAARAKRIFQ----------- 1016

Query: 966  GKHLLERDR---LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
             K+  E+ +   L S+     G +S +++ + +   DL++  +K I+K++ DQL+++K +
Sbjct: 1017 EKYQFEKQKETELQSKYAHVGGELSSFKSQVQQLDNDLQE--FKSINKKYRDQLVKVKMS 1074

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT 1082
            +MAN DL++Y  ALD A+M++H +KMEE+N  +R LW +TY+G DID I+I SDSEG  +
Sbjct: 1075 DMANNDLEKYAKALDSAIMKYHALKMEEVNDTMRHLWNKTYQGTDIDGIKISSDSEGGPS 1134

Query: 1083 -RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             R+Y+Y+V+M     E++MRGRCSAGQK+LAS+IIRLALA++F  NCGILALDEPT  LD
Sbjct: 1135 KRTYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALADSFGQNCGILALDEPTNALD 1194

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSI 1201
              N ++LAA+L  I+ +RK   NFQLI+ITHDE F + +GQ    E Y+RV++D  Q S+
Sbjct: 1195 TENIDALAASLVDIINERKNHANFQLIIITHDENFLRKLGQSDVMEYYWRVSRDSRQKSV 1254

Query: 1202 IE 1203
            IE
Sbjct: 1255 IE 1256


>gi|393212661|gb|EJC98161.1| hypothetical protein FOMMEDRAFT_171500 [Fomitiporia mediterranea
            MF3/22]
          Length = 1320

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 368/1266 (29%), Positives = 629/1266 (49%), Gaps = 113/1266 (8%)

Query: 1    MEYKAIESVLQTI--NPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +ES+L     NP+ G++  +S +CA++D E+P L+GVSKA+LENVIF HQ+++ W
Sbjct: 108  LTMKTLESILSLADGNPN-GKRATISTKCAEIDAEIPNLLGVSKAVLENVIFCHQEDSYW 166

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL +P+ LKKKFDDIF ATRYTKAL+ IK L K++  E+K  K +LE+L   K  A KL+
Sbjct: 167  PLAEPAALKKKFDDIFEATRYTKALDAIKALRKERVAELKVDKERLESLSREKAHADKLK 226

Query: 119  -------ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTA 171
                    SIS  + + E L+ +  +L  S +   +          ++  +Q+ +   T 
Sbjct: 227  ARVHDSQSSISVKEMRHEKLREECDQLIASNKRFYESATKFREKYIEIEHLQNDVERYT- 285

Query: 172  RRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIK 231
                   +  ++  A  +E+ ++D++L   + NF+    + E  + + ER   D    ++
Sbjct: 286  -------KDLEEAMAHVKEMTESDDQLAERRRNFDRYKKEAEQKLLREERRLQDTLEDLE 338

Query: 232  FLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI 291
               +N+     E   L +E   H   + ERD  I ++  + +       P+  E  L+F 
Sbjct: 339  TARKNLMTLRQERGGLEAEKKKHEQDVEERDKEIHRIAEQFHFRGFERLPYEREQLLSF- 397

Query: 292  NRIRSRLSDLER----DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGI 347
               R  L D+ +     LE  +     A     D   + +   + +E QK    +  A +
Sbjct: 398  ---RGLLDDMAKRSIGHLEKLQGEAATAQAEFKDKQANLHTEHRLLEQQKFNLQDQIASL 454

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
             K I   E+   S       L+    D +E   RIE  +  +++ +  +E  I++  +++
Sbjct: 455  QKSISTSESTLSSGHSLPRELSTLQADMQEKAARIESIK--SEIKDAMYEAKIQEASNKI 512

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
             A+++K + LN+E   L+  ++ R KL L +A+++   +  K II+    K R ++   +
Sbjct: 513  RALEEKRENLNQELKNLSLQADARAKLDLIRADVQKKAQDMKDIIEINNAKFRKLIGLDI 572

Query: 468  ---PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
                ++RD+ + + Q  R    E  D+ + + +A+  +  L+  +  +T  L + R D+ 
Sbjct: 573  RAENMERDVDRTLGQKER----EAADIENDANDANANLRHLESTVSTMTSQLKQKRDDLK 628

Query: 525  SKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARA 584
               + ++ +LE          + Q  LD A  +   ++++    +G +++++   R  +A
Sbjct: 629  GLDKRLKDELEGHA-------SVQTALDEADAELADRRARLTTGEGTKKVYELLLRSGKA 681

Query: 585  HHVCPCCERPFSAEEEDEFVKKQRVKAAS-SAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
               C  C R     E  +F K    +    S E    +  E+   +   ++L  L  +  
Sbjct: 682  LKKCTACNRALGDHEMKDFEKHLEGQMNKLSPEAQAEIKEEAKEWEDEVKRLQGLLPMEL 741

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADR 703
               +L  + IP  E  L +    + +   + D     L +++ + + ++ L Q   T   
Sbjct: 742  TRDRLKAQEIPQLETRLKQTEASVSEALSSKDIAQEKLEKMRQELKELQTLKQQASTVTD 801

Query: 704  LFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYM 763
            L    +  + +V  LE  L + G  V+T +++Q EL+       NL  E+ KL  E+  +
Sbjct: 802  LRASSERLRGEVARLEESLSATG-SVKTADDVQEELA-------NLSTEIRKLEREKSTI 853

Query: 764  ENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL------LAE 817
            +ND    QI     +E+++ A      +K  E  L H ++E  Q  +++KL      L E
Sbjct: 854  QNDREQ-QINRLRRQEDELNA------IKLQESSLRHKVQE--QKLVEDKLVTMQQELKE 904

Query: 818  ASGPLSKEKEKLLSDYNDLKVKLNREY----EEQAEQKINFQQEIEML------LKIASK 867
            +S  L   +EK+ +    L+ +L REY    EE  EQ    Q++ E +      L  A+K
Sbjct: 905  SSERLKSLEEKIKTALQPLE-RLQREYDLFKEESDEQVKKAQEQCEQVRRNQDALGRANK 963

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCK--IRTDEILVELDR-----FKDIVRNQDQ 920
              E Y   ++ R +ELQ    + E  + +C+  IR  E  +E  R      +  +   D 
Sbjct: 964  DIEVY--VRNRRGRELQ----RCEENIDACEESIREHESSIEEIRKTKGGLEKEIHESDS 1017

Query: 921  IRRNIEDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLLERDRLLSEV 979
               N+ DN   R+ +  + +   +IE+ + E   K      F+ +          + +E 
Sbjct: 1018 FLANLRDNERIRKLRKNIAENKEKIEAFDMEEAAK--ARRQFDEKYAAEKKREGDMEAEY 1075

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
            +R  G +S  +  +   + DL  +++KD+ K++ DQLI++K ++MAN DL++Y  ALD A
Sbjct: 1076 SRLGGELSSLKDQLKVLEKDL--SEFKDVTKQYTDQLIKVKMSDMANNDLEKYAKALDNA 1133

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSY----------- 1087
            +M++H++KMEE+N  +R LW +TY+G DID I+I SD EG  + RSY+Y           
Sbjct: 1134 IMKYHSLKMEEVNDTMRHLWNKTYQGTDIDGIKIRSDVEGGASKRSYNYRVGSLSYSPHM 1193

Query: 1088 ------KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
                  KV+M     E++MRGRCSAGQK+LAS+IIRLAL+++F  NCGILALDEPT  LD
Sbjct: 1194 PFMRTEKVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTNALD 1253

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSI 1201
              N ++LAA+L  I+ +RK   NFQLI+ITHDE F + +GQ    E Y+RV++D  Q SI
Sbjct: 1254 VENIDALAASLVDIINERKNHANFQLIIITHDENFLRKLGQANVMEYYWRVSRDSRQKSI 1313

Query: 1202 IEAQEI 1207
            IE Q +
Sbjct: 1314 IERQRV 1319


>gi|296826796|ref|XP_002851033.1| DNA repair protein Rad50 [Arthroderma otae CBS 113480]
 gi|238838587|gb|EEQ28249.1| DNA repair protein Rad50 [Arthroderma otae CBS 113480]
          Length = 1285

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 378/1246 (30%), Positives = 619/1246 (49%), Gaps = 126/1246 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 106  GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 165

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ E L+ +  E
Sbjct: 166  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEGLRAESHE 225

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAE---EIE 192
            L K ++ +       EL  K  ++ +     + A      E +  Q +   L +   E++
Sbjct: 226  LSKEMRRV------AELADKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVD 279

Query: 193  DTDEELKNWKNNFEGIVAK-RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L++    FE   A+ RE + S  E+    MD K + +EQN      + T    E 
Sbjct: 280  ESDEWLQSTLEQFESRQAEYREQEDSLKEKY---MDLK-ELIEQNRHKLGIKQT----EC 331

Query: 252  G------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
            G      A   R  ER   + K  AR N        F  +     IN    R+  L ++ 
Sbjct: 332  GKNENDKAQYDRQVERRGKLIKDIARQN----NFRGFDGDLDETDINDFMERMQKLSKE- 386

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
              + ++ E A + A +   DA      +  ++ A  E+K    K I   + E D+ + +I
Sbjct: 387  --RHQALEKAKREAQNQLRDAQTLLNQLSQRRSALQEVKNAAKKQISLNDKEADTIQRRI 444

Query: 366  SNLNL-----SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNRE 420
              +++     + I+ R  +    ++++  +     +E +++Q ++E+ +++ K   LN E
Sbjct: 445  DEIDVDEGKRAMIESRMEETEKNLKKEKEKAKNASWETDLQQNEAEIQSLEDKSSKLNAE 504

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
                   + D  +L   K EL++ ++  + +   + D+I +++             + Q 
Sbjct: 505  LIQGTKKAGDLARLDHLKKELKDRERSLETMSGAHGDRISNLVDPSWT-----PSNVEQG 559

Query: 481  LRALLTEFDDL-SSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL-E 535
             ++ L +  DL ++  RE D   KE+  L  K++    +L +H  +V++  + I   + +
Sbjct: 560  YQSALKKASDLITTAERERDGSSKELEHLDFKLKNARKSLQQHSAEVENAAKKINDVIGD 619

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
               +   ++   Q  LD A++  D    +Y    G+ +  +     A    VC  C RPF
Sbjct: 620  EPEEYPHTVKQKQTELDMARKDAD----QYA---GLGEYLNKCLDAANGKKVCRTCARPF 672

Query: 596  SAEEEDEFVKKQRVKAASSAEHMKVLS-LESSNADSYFQQLDKLRMVYEEYVKLSKETIP 654
              E E +  K + +     A    V++ +E+  AD   + + +L  VYE +++L+   IP
Sbjct: 673  KTESELQIFKNKLMALIKKATDEDVVAEIEAREAD--LENVRELGTVYETWIRLTGTDIP 730

Query: 655  VAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQ 714
              +K   +L  E +      ++   ++AQ    K ++E L + +    R   EI + QKQ
Sbjct: 731  ALKKEQSDLESEREGVLAKLEERDSIVAQRMESKRNIESLSKNIAIIVRYNSEILILQKQ 790

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKD--------NLQNELE-----------K 755
            + DL    +  G   RT+E+IQ E++ +L  K          L +EL            K
Sbjct: 791  IGDLSAKQEETGSS-RTLEDIQDEIA-TLGEKSRELKRVAGKLTHELNQSRVDVGRLELK 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD-EKL 814
            LRD QR ++N  +N Q+   T    +V+    L    K  E +E+        D D E L
Sbjct: 849  LRDLQRELDN--TNFQLEKKTTLVSRVEECRNLN--LKQRETIENA-------DNDIEGL 897

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASK- 867
            + E S   ++        ++D+  +      EQ E+++  QQEI  L      L++AS+ 
Sbjct: 898  IPEVSTAQAR--------HDDISTR-----SEQREREL--QQEISSLTDSLHQLELASED 942

Query: 868  IKEYYDLRKDERFKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIR 922
            I  Y      ER    Q ++S+ E      E+K  +    ++  EL+     +++ +  +
Sbjct: 943  ITNYI-----ERGGPAQLERSKRELQNISDEIKRLEAEQTDLTRELNSISTRLKDSESTK 997

Query: 923  RNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRC 982
            R   DNL YR+    +     EI  LE +  ++   S F  E  ++  E + L ++    
Sbjct: 998  RQYSDNLRYRQESKALISVNQEISDLESQNAEVDR-SRFREESERNTREHNALAAKQASK 1056

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
             G M      + +   D     YKD   +  +  I+++TT+ A  DL RY  ALDKA+M+
Sbjct: 1057 MGEMKSKDDQLMQLLADW-NTDYKDAGAKFKEAHIKVETTKAAVDDLGRYGGALDKAIMK 1115

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMR 1101
            +H++KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MR
Sbjct: 1116 YHSLKMEEINRIIGELWQKTYRGTDVDTILIRSDNESARGNRSYNYRVCMVKQDAEMDMR 1175

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ 
Sbjct: 1176 GRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQ 1235

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            Q NFQLIVITHDE F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1236 QANFQLIVITHDEEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1281


>gi|410948148|ref|XP_003980803.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Felis catus]
          Length = 1173

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 339/1195 (28%), Positives = 611/1195 (51%), Gaps = 69/1195 (5%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSK++L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K  + +L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEIVKSYENELDPLKNRLKEIEQNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + ++ ++I  + +R+    +Q +K  + L +++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMRLDNEIKALDSRK----KQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +   +RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI 333
            L      PFS     NF   +R R          ++K  E+A +M  D       + K I
Sbjct: 241  LDGFERGPFSERHIKNFHKLVRER----------QEKETEIANQMMNDFAEKETMKQKQI 290

Query: 334  EAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLS-----HIDERENKMRI 382
            +  +  K      +E+K+ IL    +K+NE  + + ++  L  S      +D+  +K   
Sbjct: 291  DEIRDKKTGLGRIIELKSEILS---KKQNELRNVKYELQQLEGSSDRILELDQELSKAER 347

Query: 383  EVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELE 442
            E+ +          +I +   QSE   +D+ ++ L++E + +   +  R ++ +   +  
Sbjct: 348  ELSKAEKNSNVEALKIEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKS 407

Query: 443  NHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEV 502
            +  ++ +KI   + D++  +L G  P  + L+              D L SKS+E ++  
Sbjct: 408  DKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKSKEINQTR 452

Query: 503  NMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRD 559
            + L  K+ +   +  +++  ++++ +  E +L S   ++F +     ++  LD  KE+ +
Sbjct: 453  DRL-AKLNKELASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIE 511

Query: 560  VQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAE 616
                +  +  G   ++  F  +        CP C+R F  E E  E +   + K   + +
Sbjct: 512  KSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPD 571

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDD 676
             +K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +     ++
Sbjct: 572  KLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEE 631

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ 736
               +L  I  ++ES +V +  V   +R   E++  ++++      L     G RT++++ 
Sbjct: 632  QETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLG-RTVQQVN 690

Query: 737  LELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE 796
             E        D + +++E  R   +  +  + +++   + L+ EK++ +  L+  ++ EE
Sbjct: 691  QEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEE 750

Query: 797  ELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQ 855
            +   L  E   L  + K   E   PL    EK   +  +L  K N    + A+ K+N  +
Sbjct: 751  QTVELSTEVQSLFREIKDAKEQLSPLETTLEKFQQEKEELINKKN-ASNKIAQDKMNDIK 809

Query: 856  QEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIV 915
            ++++ +      I+ Y    KD+  K+ + + ++  +++  C+   + I  E+   +  +
Sbjct: 810  EKVKNIHGYMKDIENYIQDGKDDYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDI 869

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER-- 972
              Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + +     LE   
Sbjct: 870  DTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKI 925

Query: 973  DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
            D +    +   G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD Y
Sbjct: 926  DNIKRNHSLAIGRQKGYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIY 985

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSY 1087
            Y  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y
Sbjct: 986  YKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNY 1045

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            +V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ES
Sbjct: 1046 RVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIES 1105

Query: 1148 LAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            LA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 1106 LAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEI 1160


>gi|258573809|ref|XP_002541086.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901352|gb|EEP75753.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1267

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 367/1240 (29%), Positives = 620/1240 (50%), Gaps = 114/1240 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL+NVIF HQDE+ WPL +PS LKKKFD+IF A 
Sbjct: 88   GERTAISSRVAELDQIMPQYLGVSKAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQ 147

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  KD A +  + +   QE+ EAL+ +  +
Sbjct: 148  KYTKAIDNIKALRKKQNEELGKYKIMEQHAKEDKDKADRAEKRLMSLQERIEALRAETHD 207

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAEEIEDTD 195
            L K ++         EL  K  ++ +     + A      E +  Q +   L + + + D
Sbjct: 208  LSKEMR------RAAELADKAWKESESYAEVLGALEGKRIEAKSIQTSIENLKQHLVEVD 261

Query: 196  EELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH- 254
            E  + W  +       R++D    +R++  +  K   L++NI+     +    +E G H 
Sbjct: 262  ES-EEWLESTLEQFGSRQAD---YQRQEEALKEKYVDLKENIETNRRRLGLKQAEYGKHE 317

Query: 255  -----MSRMNERDSTIQKLFARHN-----LGSLPNAPFSNEAALN-FINRIRSRLSDLER 303
                   R  ER   + +  AR N      G L      +E  +N F+ RI+    D  +
Sbjct: 318  NDKAQFERQVERRGKLIRDIARQNNLRGFEGDL------DEMEINEFMLRIQKLYKDRNQ 371

Query: 304  DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFEL 363
             LE  K+  +  L+       +A      +  +K    E+K    K I + + E DS++ 
Sbjct: 372  ALERAKREAQAELR-------EAQSLLNQLSQRKSTLQEVKNAARKQISQNDKEADSYQR 424

Query: 364  QISNLNLSHIDERENKMRI------EVERKTNQLAER----EFEINIRQKQSELFAMDQK 413
            +     L+ ID  E KM I      E E + NQ  ++     ++ ++  K  EL +++++
Sbjct: 425  R-----LNEIDIDEGKMAILQSRIEETESRLNQAKDKAKIASWDKDLHTKNMELRSLEEE 479

Query: 414  IKALNREKDVLAGDSE--DRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL-KGRLPLD 470
              +LN E  ++ G     D  +L   K EL++ ++  + +   + D++  ++ K   P  
Sbjct: 480  SASLNAE--LIEGTKRVGDLARLDHLKKELKDRERSLETMTSAHGDRVSQLVSKTWNP-- 535

Query: 471  RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI 530
             ++++E    L    T           A +E+  +++ ++    +L +H++++D     +
Sbjct: 536  SNIEQEYQSVLNVASTSLTKTERDRDGASRELEYVEVTLKTARRSLQQHKQELD---HCV 592

Query: 531  ESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPC 590
            E   E+ +++      Y  V+   + + ++ K   +   G+ +        A+   VC  
Sbjct: 593  ERIREATDEEPAE---YPDVVKQRQTQLEMAKKDMDQYAGLGEYLSKCLEAAKQKKVCRT 649

Query: 591  CERPFSAEEE-DEF-VKKQRV--KAASSAEHMKVLSLE-----SSNADSYFQQLDKLRMV 641
            C RPF  ++E  EF VK + +  KA  +A+  +V  LE     + NA +Y          
Sbjct: 650  CSRPFKTDKEFQEFKVKLESLVKKATMNADDEEVQHLEENLEFARNAQTY---------- 699

Query: 642  YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETA 701
            Y+ +V++S  TIP  +K +  L  E ++     +D   ++++    K  +E L + V T 
Sbjct: 700  YDSWVRISNTTIPETDKEIARLESEREELLAKVEDYDRIVSEKGESKRDIESLAKTVATI 759

Query: 702  DRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQR 761
             +   EI+  + Q+ +L       G   RT+E+IQ  L+        L+  + K+ +E+ 
Sbjct: 760  AKYESEIKTLRSQIQELSAKQQDSGDS-RTLEDIQDMLATVGEESRELRRTITKITNEKD 818

Query: 762  YMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP 821
                +++ ++++   +R E   A   L   KKA   +E  +EE   L+  ++   E +  
Sbjct: 819  QSRAEITELELQLRDVRSELDNAKFQLD--KKAS--IETRLEEYRNLNAKQRESIEKADQ 874

Query: 822  ----LSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASKIKEY 871
                L+ E  K  + Y D+  +      EQ E+++  QQ++  L      L++A++    
Sbjct: 875  DIENLAPEVSKAQAKYEDISSR-----SEQKEREL--QQDVASLSDSLHQLELANEDIVS 927

Query: 872  YDLRKDERFKELQEKKSQSE---SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            Y+ R   R  +L+  K + E   +E++  +     I  +L+     +++ +  +R   DN
Sbjct: 928  YNDRGGPR--QLERSKRELENITTEIEQLESEQGSITRQLNAVSARLKDSENTKRQYSDN 985

Query: 929  LNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSV 988
            L YR     + +  +EIE LE +  ++   + F  E  +   E +   +      G M  
Sbjct: 986  LRYRREMRVLGEVKAEIERLEAQNAEVDR-ARFRQESARRTEEYNHFSAHQASKMGEMKA 1044

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
                + +   D     YKD   +  +  I+++TT+ A  DL RY  ALDKA+M++H++KM
Sbjct: 1045 KDNELMQLLADW-NTDYKDAAFKFKETHIKVETTKAAVDDLGRYGGALDKAIMKYHSLKM 1103

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAG 1107
            EEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V+M   DAE++MRGRCSAG
Sbjct: 1104 EEINRIIEELWQRTYRGTDVDTILIRSDNENAKGNRSYNYRVVMVKQDAEMDMRGRCSAG 1163

Query: 1108 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQL 1167
            QKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQL
Sbjct: 1164 QKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANFQL 1223

Query: 1168 IVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            IVITHDE F + +     ++ YYRV++ D Q SIIE Q I
Sbjct: 1224 IVITHDEEFLRHMHCGDFSDYYYRVSRSDRQKSIIERQSI 1263


>gi|213404310|ref|XP_002172927.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275]
 gi|212000974|gb|EEB06634.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275]
          Length = 1296

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 343/1224 (28%), Positives = 600/1224 (49%), Gaps = 121/1224 (9%)

Query: 11   QTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKF 70
            Q +    GE+  +S RCA++D++VP  +GV++A+L+ VIF HQ+E+ WPL +P+TLKK+F
Sbjct: 115  QLLVTKNGERSTVSNRCAELDQQVPLSLGVTRALLDYVIFCHQEESFWPLSEPATLKKRF 174

Query: 71   DDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEA 130
            D+IF + RY KAL+ IK L KDQ  +IK     L + ++ K+ A K+ + + ++Q+K  A
Sbjct: 175  DEIFESMRYAKALDQIKVLRKDQTNQIKVDNATLAHFKSDKERAEKIEDILHENQKKVAA 234

Query: 131  LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEE 190
            LK ++  L++               L ++ K QD+          LF+  +K + ++   
Sbjct: 235  LKAEVDLLDEE--------------LVEVAKEQDE----------LFQHTEKIWFSM--- 267

Query: 191  IEDTDEELKNWKNNFEGIVAKRESDISKLER---EKNDMDTKIKFLEQNIDAYTAEITNL 247
                 + +++WK        K E ++   +R   E N ++++++   Q   ++ A +   
Sbjct: 268  ----KKRMRSWKICPCHYSEKVEGEMEWYQRSENEINSLNSQLQITRQKNSSFLAIVGQA 323

Query: 248  LSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLED 307
             +E   H  R+ ERD  +++L + +      +       +L        ++  LE + + 
Sbjct: 324  RAEVKLHEERLQERDRLMKELKSIYGYDIQSSEGVYEAHSL--------KIKSLEAEWKS 375

Query: 308  KKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISN 367
             K+ +E  +          + + +NI AQK   M+ +    K +   EN  +S + ++S 
Sbjct: 376  IKQKNEHGIS-------QISSKIENIRAQKSFLMQERQQNKKRMAVFENNINSLKKRLSE 428

Query: 368  L--NLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVL- 424
               N   I    + + + +      L+    E      +S+L AM Q+++ LN       
Sbjct: 429  FEGNFEDI----SALEVSIADAETALSSYRSEYVKSDWESKLTAMKQELRELNESYQNTV 484

Query: 425  ------AGDSEDRVKLALKKAE----LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
                  A  + DR KL++ ++     +E  +    ++I EY +  R+ +           
Sbjct: 485  ELVHKAASQANDRAKLSMLRSRKLKLMEQKQSLFDELIAEYTEITREKVTSETI------ 538

Query: 475  KEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQ---EVTDNLSKHRKDVDSKKRFIE 531
             ++  +L+ L    D L+ + +   KE   L +K+    E  +++++  ++ D+     +
Sbjct: 539  -DLASSLKTLSANVDKLTLEEQRVSKESTELNLKLTLAYERNESIAEQLEEFDA-----Q 592

Query: 532  SKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCC 591
             K  + N    S +  +      ++++D+   ++ +       ++   +V+   H C  C
Sbjct: 593  LKSSTGNPDQLSSEIEEIEAQIEEQRKDLHSLQFGVL-----FYERAIKVSDEKHACQLC 647

Query: 592  ERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKE 651
             R     E  EF K       +     + L  E +  ++   QL  L  + E Y+ LS +
Sbjct: 648  RRGLDDSERKEFTKYCNSMVLTIPSKAQDLEKELTQLETTLNQLRSLLPIQERYIALSSD 707

Query: 652  TIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLW 711
             +  A+K + EL ++    S+   +    L   K   + +  L   +   DR+  E    
Sbjct: 708  -LEKAKKEIAELEDDFSSVSKKHKEKQASLELEKEKLQKLTALSSKMSNVDRMRDEALTT 766

Query: 712  QKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ 771
             + + +LE  L + G    T+E +Q +L        +L+ +  + R+E R  EN   + +
Sbjct: 767  GESIRELETTLSNTGTA-ETIESLQEKLK-------DLETQTSQKREEYRVFENAFEDAK 818

Query: 772  IRWHTLREEKVKAANTLRDVKKAEEELEH----LMEEKGQLDLDEKLLAEASGPLSKEKE 827
             +  +L  +K + +  LR+ K    E ++    L + K  L+  E  +   +  LS   E
Sbjct: 819  KQLVSLESKKSEDSMMLRETKLRLREKQNIQMNLNDNKSNLEEGEIAVQNINKKLSSNDE 878

Query: 828  KLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDER----FKEL 883
            ++     +L  +LN    E  ++   F +++ +  +  +K++      K++      K  
Sbjct: 879  EM----QELDKQLNSLKNEAQDELNCFSEKLRIAREQYTKLQSLMVAIKNDTSADALKTA 934

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFAS 943
            +E   Q+ S++K+ + +  E   E   F+  + N     RNI DNL YR  K ++ +  S
Sbjct: 935  EENCEQTSSQIKNFEEKIQEKTNERAEFEKKLHNLKDNERNIADNLRYRRLKQQLSQSMS 994

Query: 944  EIESLEERVLKIG------GVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNK 997
             ++ L++ +  +            + + G+   +R   L E  + +G        I+ N 
Sbjct: 995  RLQQLKKELQNVDRENFMLNSQNLKEKYGQLNAKRAGFLGECRQLEG-------QIAHNT 1047

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
             +L Q  YKD  +R+  QLI+ KT + AN+DL +Y  ALD A+M+FH++KM E+N+II E
Sbjct: 1048 REL-QIDYKDAKERYRRQLIKTKTLDKANEDLGKYGRALDNAIMQFHSLKMNEVNRIIDE 1106

Query: 1058 LWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
             W+QTY G DID I I SD+E  G RSY+Y+V M  GDAEL+MRGRCSAGQKVLA +IIR
Sbjct: 1107 AWKQTYCGTDIDTILIRSDNETKGNRSYNYRVCMVKGDAELDMRGRCSAGQKVLACIIIR 1166

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCGILALDEPTTNLD  N  SLA +L RI+E R+ Q NFQLIVITHDERF 
Sbjct: 1167 LALAECFGINCGILALDEPTTNLDDENICSLAQSLARIVEFRRRQRNFQLIVITHDERFI 1226

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSI 1201
            +L+    + + YYRV +D++Q+SI
Sbjct: 1227 RLMNTESYCDYYYRVTRDENQNSI 1250


>gi|297790052|ref|XP_002862938.1| hypothetical protein ARALYDRAFT_920987 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297308718|gb|EFH39197.1| hypothetical protein ARALYDRAFT_920987 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 186

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/186 (96%), Positives = 182/186 (97%)

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR 1083
            MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD+DYIRIHSDSEGAGTR
Sbjct: 1    MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTR 60

Query: 1084 SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
            SYSYKVLMQTGD ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP
Sbjct: 61   SYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 120

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            N+ESLA AL RIMEDRKGQENFQLIVITHDERFAQ+IGQRQHAEKYYRVAKDD QHSIIE
Sbjct: 121  NSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIE 180

Query: 1204 AQEIFD 1209
            AQEIFD
Sbjct: 181  AQEIFD 186


>gi|226289954|gb|EEH45438.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb18]
          Length = 1299

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 377/1242 (30%), Positives = 604/1242 (48%), Gaps = 118/1242 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 120  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 179

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 180  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKENKDRADRAEKRSIKLQEEIEALRAESHE 239

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L K ++         EL  K  ++ +  +  +        E +  Q   + L +   E++
Sbjct: 240  LSKEMR------RAAELADKAWKESESYVQILGTLEGKRIEAKSIQTSISNLQQHLVEVD 293

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKND-MDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE   A+        +RE+ + +  K   L Q I+   A++    +E 
Sbjct: 294  ESDEWLERALEQFESKQAQ--------DREQEESLKQKYVDLRQLIEDNRAKLGLKQAEY 345

Query: 252  GAH------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
            G H        R  +R   + K  AR N     +    +    +F+ RIR +LS      
Sbjct: 346  GKHENDKAQFERQLKRQEKLIKEIARQNSIRGFDDDLDDMQVNDFMQRIR-KLS------ 398

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            +D+ ++ E A + A     +A      +  +K A  E+K    K I   ++E DS++ ++
Sbjct: 399  KDQNQALERARREAQVEQREAQSLLNQLGQRKSALQEVKNAARKQITSNDHEADSYQRRL 458

Query: 366  SNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNRE 420
              + +   D+   + RIE  ER  N+   +     ++  I+   +E+  ++ +   LN E
Sbjct: 459  DEIEIDEGDKAVLESRIEETERSLNEAKGKAKAASWDSAIQSTTAEIRLLEDESSKLNAE 518

Query: 421  ---KDVLAGDSE--DRVKLALKKAE--LENHKKKHKKIIDEYKDKIRDVLKGRLP--LDR 471
                   AGD    D +K  LK  E  LE  K  H + I ++      V +   P  LD+
Sbjct: 519  LIEGTKRAGDLARLDHLKRELKDRERSLETMKGAHAERIKKF------VTQEWSPSTLDQ 572

Query: 472  DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE 531
            + +  +  A  AL     +   K RE    +     K++    +L + R ++   K+ IE
Sbjct: 573  EYQTALEAATNALTHVERERDGKCRE----LEHTDFKLKTTRKDLLQKRNEL---KQCIE 625

Query: 532  SKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCC 591
               +S+N +    + Y  +L   + + D+ K   +   G+          AR   VC  C
Sbjct: 626  KIRDSVNDEP---EEYPDILKQRQVQLDMAKKDADQYAGLGDYLSKCMDAARQKKVCRMC 682

Query: 592  ERPFSAEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
             RPF  E E        D  VK+    AA  +       LE++ + S F         Y 
Sbjct: 683  SRPFKTEGEFQIFLNKLDALVKRATQDAADESLRQLEEDLEAAQSASTF---------YG 733

Query: 644  EYVKLSKETIPVAEK---NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
             +V+LS   IP  EK    L    E+L  + +  D ++   A++K D   VE L + V T
Sbjct: 734  SWVRLSNTEIPALEKEEAKLESQREDLLSQIEDHDKIVSKRAELKKD---VESLSKTVAT 790

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLR 757
              +   EI + + Q+ +L     +  Q V   RT+E+IQ +LS        LQ  + KL 
Sbjct: 791  ISKYDSEIGILRSQIQEL----STNQQDVMSSRTLEDIQEQLSEIGEKSRELQKVISKLS 846

Query: 758  DEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAE-----EELEHLME------EKG 806
             E+     +++ ++++   +R     A + L   KKA      EE  +L        EK 
Sbjct: 847  SEKDQSRTEITTLELKLRDVRSNLGNANHQLE--KKANLIARVEEYRNLNAKQRESIEKA 904

Query: 807  QLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIAS 866
              D+D  L+ E S        K  + Y+D+  +  R  +E  ++       +  L     
Sbjct: 905  DRDID-NLVPEVS--------KAQARYDDISSRAERREKELQQEASQLSDSLHQLNLANE 955

Query: 867  KIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIE 926
            +I  Y +     +    +++    E E+ + +     I  E++     +++ +  +R   
Sbjct: 956  EITSYIERDGPAQLSRCEKEVCSIEMEIANLEKEQGSITKEINEISIRLKDSESTKRQYA 1015

Query: 927  DNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTM 986
            DNL YR+  A ++   + IE L  +  ++   S F+ E  +   E + L ++     G M
Sbjct: 1016 DNLRYRQETAALEDVNTTIEELTAQNAEVDR-SRFKEESERRTREHNALSAKQASKMGEM 1074

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
                  + +   D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H++
Sbjct: 1075 KSKDDQLMQLLADW-NTDYKDAGPKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSL 1133

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCS 1105
            KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCS
Sbjct: 1134 KMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAEMDMRGRCS 1193

Query: 1106 AGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF 1165
            AGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NF
Sbjct: 1194 AGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRSRQQQSNF 1253

Query: 1166 QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            QLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1254 QLIVITHDEEFLRHMKCGDFSDYYYRVSRNERQKSIIERQSI 1295


>gi|395817604|ref|XP_003782256.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Otolemur garnettii]
          Length = 1173

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 337/1204 (27%), Positives = 617/1204 (51%), Gaps = 87/1204 (7%)

Query: 38   MGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEI 97
            +GVSK++L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KALE ++++ + Q Q++
Sbjct: 5    LGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKV 64

Query: 98   KTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLK 157
            K  + +L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   E  L 
Sbjct: 65   KECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLS 124

Query: 158  DLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAKRE 213
             + ++ ++I  + +R+    +Q +K  + L +++E     TDE+L +  +N +  V ++E
Sbjct: 125  KIMRLDNEIKALDSRK----KQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKE 180

Query: 214  SDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN 273
              +   +RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L  +  
Sbjct: 181  RKLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLE 240

Query: 274  LGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYL------DAN 327
            L      PFS     NF   +R      ER  ++ + +++L    A    L      +  
Sbjct: 241  LDGFERGPFSERQIKNFHKLVR------ERQEKEAETANQLMNDFAEKEALKQKQIDEIR 294

Query: 328  DRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ---ISNLNLSHIDERENKMRIEV 384
            D+   +    + K+EI++      K+ E +   +ELQ    S+  +  +D+   K   E+
Sbjct: 295  DKKTGLGRIIELKLEIQSK-----KQHELKNAKYELQQLEGSSDRILELDQELTKAEREL 349

Query: 385  ERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENH 444
             +          ++ +   Q+E   +D+ ++ L++E + +   +  R ++ +   +  + 
Sbjct: 350  SKAEKNSNVEALKMEVISLQNEKVDLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKADK 409

Query: 445  KKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNM 504
             ++ +KI   + D++  +L G  P  + L+              D L SKS+E ++  + 
Sbjct: 410  DEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKSKEINQTRDR 454

Query: 505  LQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQ 561
            L  K+ +   +  +++  ++++ +  E +L S   ++F +     ++  LD  KE+ +  
Sbjct: 455  L-AKLNKELASAEQNKNHINNELKKKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKS 513

Query: 562  KSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHM 618
              +  +  G   ++  F  +        CP C+R F  E E  E +   + K   + + +
Sbjct: 514  SKQRAMLAGATAVYSQFITQLADENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKL 573

Query: 619  KVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVL 678
            K    E    +    ++  L  + +  + L ++ IP     L  +  ++ +     ++  
Sbjct: 574  KSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQE 633

Query: 679  GVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTM 732
             +L  +  ++ES +V +  V   +R       +Q ++ D+E  +  +    QG+   RT+
Sbjct: 634  TLLGTVMPEEESAKVCLTDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTV 686

Query: 733  EEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHT---LREEKVKAANTLR 789
            +++  E        D + +++E  R   + +++    IQ+   T   L+ EK++ ++ L+
Sbjct: 687  QQVNQEKQEKQHKLDTVSSKIELNR---KLIQDQQEQIQLLKSTTNELKSEKLQISSNLQ 743

Query: 790  DVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAE 849
              ++ EE+   L  E   L  + K   E   PL    EK   +  +L  K N    + A+
Sbjct: 744  RRQQLEEQTVELSTEVQSLHREIKDAKEQVSPLETTLEKFQQEKEELINKKNTS-NKIAQ 802

Query: 850  QKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVEL 908
             K+N  +++++ +      I+ Y +  K++  K+ + + ++  +++  C+   ++I  E+
Sbjct: 803  DKLNDIKEKVKNIHGYVKDIENYIEDGKEDYKKQKETELNKVIAQLSECEKHKEKINKEM 862

Query: 909  DRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK-IGGVSTFETELGK 967
               +  +  Q    R ++DNL  R    K ++   E+E   ++ LK +G +   + +   
Sbjct: 863  GIMRQDIDTQKIQERWLQDNLTLR----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEH 918

Query: 968  HLLERDRLLSEVNRCQ----GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTE 1023
              LE +  +  + R      G    Y+  I   K +L++ Q++D ++++ + +I ++TTE
Sbjct: 919  QKLEEN--IENIKRNHSLALGRQKGYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTE 976

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SE 1078
            + NKDLD YY  LD+A+M+FH+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S 
Sbjct: 977  LVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSA 1036

Query: 1079 GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
                R+Y+Y+V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT
Sbjct: 1037 SDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1096

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q
Sbjct: 1097 NLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQ 1156

Query: 1199 HSII 1202
             S I
Sbjct: 1157 CSEI 1160


>gi|432895825|ref|XP_004076180.1| PREDICTED: DNA repair protein RAD50-like [Oryzias latipes]
          Length = 1311

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 331/1231 (26%), Positives = 637/1231 (51%), Gaps = 73/1231 (5%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K++E V+  +    GE+V LS +C ++DRE+ + +GVSK +L NVIF HQ+E+NWPL +
Sbjct: 111  FKSLEQVITRMKD--GERVSLSSKCGELDREMISSLGVSKPVLNNVIFCHQEESNWPLSE 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK KFD IF+AT+Y KALE +++L   Q+  +K  +++L  L+  K+ A ++RE+++
Sbjct: 169  GKALKDKFDSIFAATKYIKALETMRQLRLKQSVTVKECQVELRYLKENKEKAQQIRETVA 228

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            + + +  A K+ +Q ++  I+ +++++   +  L  + ++ + I  + +R+  + EQ  K
Sbjct: 229  KKEAQLMASKDSIQLIDGQIEPLENRLIEIDTKLGKVLRLDNDIRLLESRKKQM-EQDNK 287

Query: 183  QYAALAEEI-EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +     E++ + +D+EL++   N +  V  +E  ++  ++E      + + L +      
Sbjct: 288  ELLETMEQVFQGSDQELQDVYQNHQRTVKDKERRLADCQKELERAGRECQRLNRVKADLL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  EA   M  +  RD+ ++ L +   +     +PF+     +F   +  RL   
Sbjct: 348  VEQGRLQLEADRQMQCIKNRDTQVRSLSSYLEMEGYDRSPFTALQLESFHRHVTQRLEQ- 406

Query: 302  ERDLEDKKKSDELALKMAWDSYLD-ANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
            E++   +  +D    +      +D   D+   +E   + K +++    K  +E  + R  
Sbjct: 407  EKETFSQAMADLQEKEQQKQQSIDEMRDKKTGLERTVELKRDMQG---KKQQELRSIRAD 463

Query: 361  FE-LQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
             + L+ S+  L  +D    K   +++         E ++ + + Q E   +D+  + L++
Sbjct: 464  LQRLEGSSTRLQELDNELTKAEHDLQSAVQSSNVEELKVEVEELQKEKSELDRTQRQLDQ 523

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            E   L   +  R ++ + K +  + +++ +KI   + + +  +L G  P  R+L+     
Sbjct: 524  EMQTLNVHTTARTQMEMLKKDKLDKEEQIRKIKSRHNEDLVTLL-GHFPNKRELE----- 577

Query: 480  ALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK----------RF 529
                     D L SKS+E           I    D L+K  KD+ S +          R 
Sbjct: 578  ---------DWLYSKSKE-----------INGTRDRLAKLNKDLASNEQNKSHTAAELRK 617

Query: 530  IESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARA 584
             E +L S  ++ F++   Q +  D  K + D++K+    A   G   ++  F  +     
Sbjct: 618  KEQQLTSDEEKFFNVCGSQDLEQDLGKLQEDLEKASKQRAMLAGATAVYTQFISQLTEER 677

Query: 585  HHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
               CP C+R F +E +  + +   + K     + +K    +    +    ++  LR V +
Sbjct: 678  EPCCPVCQRTFPSESDLQDVINDMQSKLRLVPDKLKNTEQDLKRKERKRDEMMALRPVRQ 737

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADR 703
              V++ ++ +P     L  +  ++++     +    +L+++ +++++ +  +Q +   DR
Sbjct: 738  SIVQVQEKELPELRNRLQTVNRDIERLKADVEKQETLLSRLMSEEDTAKSCLQDISLMDR 797

Query: 704  LFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQ 760
               +++  ++++      L     GV   RT++++  E   +    D + ++++  R+  
Sbjct: 798  YMMDLREVERKIAQQAAKL----HGVDLNRTIQQVSQEKQETQHKLDTISSKMDLKRNLI 853

Query: 761  RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG 820
            +  ++ +  ++   +  + EK++ ++ ++  ++ EE+      E   L  D +   E   
Sbjct: 854  QSQQDQIQMLKSEVNERKAEKLQLSSDMQKQQQLEEQCVEFTTEIQALTRDIREAKEQLA 913

Query: 821  PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDER 879
            PL+   EKL  +   L ++L ++ +E+  +KIN   + ++ +  +  +I +Y    KD+ 
Sbjct: 914  PLTAALEKLQQEKQSL-MELKKQKQEEGREKINGINERVKAITTLEREIHKYVSDGKDQ- 971

Query: 880  FKELQEKKSQ-SESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            +KE +E + Q + +++   + + ++I  E+   +  +  Q    R ++DNL  R+ + ++
Sbjct: 972  YKEQKESELQETTTQLHEAEKQKEKINKEMGNIRQDIDTQKVQERLLQDNLTLRKREEEL 1031

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNR--CQGTMSVYQTNISRN 996
             +  ++ E+L   +  IG +   +    +  +ER     + NR    G    ++  I  +
Sbjct: 1032 REVVAKHEAL---LKDIGNMQVLQLRQERRDVERKLEDLKKNRSIALGRQKGFEDEILHH 1088

Query: 997  KIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIR 1056
            + +L++ QY   ++R+ +++I ++TTE+   DL+ YY ALD+ +M+FH+MKM+EINKIIR
Sbjct: 1089 RKELREDQYDKAEERYKNKMITMRTTELVINDLNLYYKALDQTIMKFHSMKMDEINKIIR 1148

Query: 1057 ELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVL 1111
            +LW+ TYRGQDI+Y+ I SD     S G   R Y+Y+V+M  GD  L+MRGRCSAGQKVL
Sbjct: 1149 DLWRSTYRGQDIEYVEIRSDVDENASAGVKRRVYNYRVVMVKGDTALDMRGRCSAGQKVL 1208

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVIT 1171
            ASLIIRLALAET CLNCGILALDEPTTNLD  N ESLA AL  I++ R  Q NFQL++IT
Sbjct: 1209 ASLIIRLALAETLCLNCGILALDEPTTNLDRENIESLALALVDIIKSRSRQRNFQLLIIT 1268

Query: 1172 HDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            HDE F +L+G+  + E +YR+ K+  Q+S I
Sbjct: 1269 HDEDFVELLGRSSYIEHFYRIRKNQDQNSEI 1299


>gi|392863946|gb|EJB10719.1| rad50 [Coccidioides immitis RS]
          Length = 1355

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 367/1241 (29%), Positives = 611/1241 (49%), Gaps = 116/1241 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+AIL+NVIF HQDE+ WPL +PS LKKKFD+IF A 
Sbjct: 169  GERTSISSRVAELDQIMPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQ 228

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  +  +  KD A +  +   Q QE+ EAL+ +  E
Sbjct: 229  KYTKAIDNIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHE 288

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
            L K ++   D+ DK        K+     + +  +  +R  + +  Q     L + + + 
Sbjct: 289  LSKEMKKAADLADK------AWKESESYAEILGALEGKRIEV-KSIQTSIDNLKQHLVEV 341

Query: 195  DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
            DE  + W    E  + +  S  ++   ++  +  K   L++NI+    ++    +E G H
Sbjct: 342  DES-EEW---LESTLEQFGSRQAEYREQEESLKEKYVDLKENIERNRHQLGLKQAEYGKH 397

Query: 255  ------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD---- 304
                    R  ER   + +  AR N  +L    F  +     IN    RL  L RD    
Sbjct: 398  ENDKAQFERQVERRGKLIRDIARQN--NLRG--FEGDLDEMEINEFMQRLQKLSRDRNQT 453

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF--- 361
            L+  K+  ++ L+       +       +  +K A  E K      I + + E DS+   
Sbjct: 454  LDRAKREAQVELR-------EVQSLLNRLSQRKSALQEGKNAARNQISQNDKEADSYQHR 506

Query: 362  --ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
              E++I    L+ ++ R  +    +++  ++     +E +++ K +EL +++++   LN 
Sbjct: 507  LNEIEIDEGKLAILESRIEETEGRLQQAKDKAKTASWEKDLQTKNAELRSLEEESSLLNA 566

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            E       + D  +L   K EL++ ++  + +   + D+I  ++             I Q
Sbjct: 567  ELIEGTKKAGDLARLDHLKKELKDRERSLETMASAHGDRISQLISQAWN-----PSNIEQ 621

Query: 480  ALRALLTEFD-DLSSKSRE---ADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
              +++L E    L+   R+   A KE+  +++ ++    +L +H++++D   + I   ++
Sbjct: 622  EFQSVLNEATVSLTKAQRDRDGASKELEYIEVTMKNARKSLQQHKQELDDCVQRIREAID 681

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
               ++      Y  V+   +   ++ K   +   G+ +        AR   VC  C R F
Sbjct: 682  DEPEE------YPDVVKQKQSSLEMAKKDVDQYAGLGEYLGKCLEAARQKKVCRTCGRGF 735

Query: 596  SAEEE--DEFVKKQRV--KAASSAEHMKVLSLE-----SSNADSYFQQLDKLRMVYEEYV 646
              E+E  D  +K + +  KA  +AE   V+ LE     + NA +Y          Y+ +V
Sbjct: 736  KTEKEFHDFSLKLENLLKKATMNAEDENVVQLEEDLEIARNAQTY----------YDTWV 785

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +LS  TIP AEK +  L  E ++     +D   ++++    K  +E L + V T  +   
Sbjct: 786  RLSNTTIPEAEKEISRLELEREELLVKVEDHDAIVSEKGESKRDIESLSKTVATIAKYEG 845

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EI+  + Q+ DL       G   RT+EEIQ  ++        L+  + K+ +E+     +
Sbjct: 846  EIKTLKVQIQDLSTKQQQPGSS-RTLEEIQDMIATIGEGCRELKRAIAKITNERDQSRTE 904

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG----PL 822
            ++ ++++   +R E   A   L   KKA   +E  +EE   L+  ++   E +      L
Sbjct: 905  ITELELQLRDVRSELDNARFQLD--KKAS--IEARLEEYRNLNTKQRESIEKADHDIESL 960

Query: 823  SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASKIKEYYDLRK 876
              E  K  + ++D+  +      EQ E+++  QQE+  L      L +AS+    Y+ R 
Sbjct: 961  VPEVSKAQAKFDDINARA-----EQREREL--QQEVSSLSDSLHQLDLASEDIVSYNDRG 1013

Query: 877  DERFKELQEKKSQSES---EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE 933
              R  +L+  K + E+   E++  +     +  +L+     +++ +  +R   DNL YR 
Sbjct: 1014 GPR--QLERSKREVENITKEIEQLEAEQGSLTRQLNAVSARLQDSENTKRQYSDNLRYRR 1071

Query: 934  TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNI 993
                + +  +EI  LE            E +  +   E DR   E N    T +     +
Sbjct: 1072 EMRALGEVRAEIARLE--------AQNAEVDRARFKEESDRRTREYNFLSATQASKMGEM 1123

Query: 994  SRNKIDLKQ------AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMK 1047
                  L Q        YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H++K
Sbjct: 1124 KSKDNQLLQLLADWNTDYKDAAFKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHSLK 1183

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSA 1106
            MEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V+M   DAE++MRGRCSA
Sbjct: 1184 MEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVVMVKQDAEMDMRGRCSA 1243

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQ 1166
            GQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQ
Sbjct: 1244 GQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQ 1303

Query: 1167 LIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            LIVITHDE F + +     ++ YYRV++ D Q SIIE Q I
Sbjct: 1304 LIVITHDEEFLRHMQCGDFSDYYYRVSRSDKQKSIIERQSI 1344


>gi|54792259|emb|CAF18543.1| RAD50 protein [Gallus gallus]
          Length = 1250

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 344/1188 (28%), Positives = 605/1188 (50%), Gaps = 85/1188 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++   Q  ++K  + +L+ L+  K+ A ++++++
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRLKQGTKVKECQTELKYLKQNKEKAQEIQDNL 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  A K  ++ +E  +  +   +   E  L ++  + + +  + +RR  + +  Q
Sbjct: 228  ANREAQLSASKENIKSIESQLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDNQ 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                 + +  + TDE+LK+  +N +  V ++E  +S  +RE +    + +          
Sbjct: 288  DLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELDRASKECQRFNSEKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS IQ L A+  L     APF++     F   ++      
Sbjct: 348  IERGRLQLQADRHQEHIKVRDSLIQALSAQLELDGFEQAPFNDRQIAVFHELLK------ 401

Query: 302  ERDLEDKKKSDELALK------MAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKE 355
            ER   D + +++L  +      M  +      DR   +E     K +I+   L  +K  +
Sbjct: 402  ERQKSDTEAANQLMREFTQKEAMKQEQIDKIRDRKTGLERSIDLKSDIQNKRLAELKNVK 461

Query: 356  NERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIK 415
             E    +L+ S+  ++ +D    KM  E+E+          E  ++  Q+E   +D+ ++
Sbjct: 462  YE--LCQLEGSSDRIAELDREIVKMEHELEKAERNSNVETLEQEVQTLQNEKINLDKVLR 519

Query: 416  ALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKK 475
             L++E + L   +    ++ + K +  + +++ +K+   + +++  +L G  P     KK
Sbjct: 520  RLDQEMEQLNLHTTTITQMEMLKKDKADKEEQIRKVKLRHFEEL-TLLLGYFP----NKK 574

Query: 476  EITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
            ++   L    TE ++  S+    +K++   + +   ++  L K            E +L 
Sbjct: 575  QLEDWLHGKSTEINETRSRHALLNKQLASAEQQKNYISAELRKK-----------EEQLS 623

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRD-VQKS--KYNIADGMRQMFDPF--ERVARAHHVCPC 590
            +   ++F +   Q    +  + +D ++KS  +  +  G   ++  F  +        CP 
Sbjct: 624  NYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPV 683

Query: 591  CERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS 649
            C+R F  E E  + +   + K   + + +K    E    +    ++  L+ + +  ++L 
Sbjct: 684  CQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKKREKKRDEMIGLKPIRQTVLELQ 743

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV----ETADRLF 705
            +  IP     L  +  +               A++K + E  E L+Q V    E A+   
Sbjct: 744  ERDIPDLRNRLQTVNRD--------------FARLKGEIEEQETLLQTVLSEKEGANACL 789

Query: 706  QEIQL---WQKQVDDLEYML---DSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKL 756
            Q+I L   +Q  + D+E  +   +++  GV   RT+ ++  E        D + +++E  
Sbjct: 790  QDITLMERYQTDIRDVERKIAQQEAKLLGVDLNRTVLQVSQEKQAKKHLWDTVTSKIELN 849

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLA 816
            +  ++  +N +  ++   + LR EK++ +++++  ++ EE+   L  E   L  + K   
Sbjct: 850  QKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTTEVQSLSREIKEEK 909

Query: 817  EASGPLSKEKEKLLSDYNDL---KVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYY 872
            E   PL    EKL  D  DL   +   N+E +E    KIN  +++++ + K   +I+ Y 
Sbjct: 910  EQVFPLDATLEKLQQDKEDLINKRTASNKEIQE----KINAIKEKVKDINKYTKEIENYI 965

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
               K+E  K+ + +  +  S++ +C+ + ++I  E++  +  +  Q    R +EDNL  R
Sbjct: 966  QQGKEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQERWLEDNLTLR 1025

Query: 933  ETKAKVDKFASEIESLEERVLKIG--GVSTFETELGKHLLERDRLLSEVNRCQ-GTMSVY 989
            E   ++      I+ L   V K+G   V   + E  KHL E+   L   +    G    +
Sbjct: 1026 ERNKELKGVEDNIKEL---VKKMGEMKVPQLKNE-QKHLEEKIEALKRNHHVALGRQRGF 1081

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            +  I R K +L+++Q+KD +++H + +I ++TTE+ NKDLD YY ALDKA+M FH+MKM+
Sbjct: 1082 EEEIVRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMKMQ 1141

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRC 1104
            EINKIIR+LW+ TYRGQDI+YI I SD     S     RSY+Y+V+M  GD  L+MRGRC
Sbjct: 1142 EINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRC 1201

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
            SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL
Sbjct: 1202 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHAL 1249


>gi|384499176|gb|EIE89667.1| hypothetical protein RO3G_14378 [Rhizopus delemar RA 99-880]
          Length = 1115

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 347/1212 (28%), Positives = 578/1212 (47%), Gaps = 134/1212 (11%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K I++ L   +P TGE   +S RCADMD E+P  +GV KAIL+NVIF HQ+E+NWPL + 
Sbjct: 19   KTIDNSLLRYDPVTGEAFSISSRCADMDAELPLHLGVPKAILDNVIFCHQEESNWPLSES 78

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            S LKKKFDDIFS+ RY  AL+ IK + K+  Q++K   ++LE L+     A K+R  ++Q
Sbjct: 79   SLLKKKFDDIFSSKRYAVALDNIKDVKKEAVQDVKIGNVRLEALKADTVKAKKIRADLTQ 138

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
              ++T A  N +  +E  I     ++       +D+    DQI  +  +R          
Sbjct: 139  LNQQTAAKLNALDLIEAKIDQAQQEVARLSDVFRDIHLTSDQIQQIINKRDFYLTTIHSL 198

Query: 184  YAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAE 243
               L+   E T EELK   +       +   +   L  ++  ++ K+K  +  +      
Sbjct: 199  QDTLSPRPEST-EELKRLLDEHRVSEGRVSDERDGLMEKRRGLERKLKTAQDELSRKHTT 257

Query: 244  ITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLER 303
            +  L++       +M  R   I+ + + HNL S      S  AAL     +R +++ LE 
Sbjct: 258  VGKLMAAKEQMEDQMQRRIELIESINSTHNL-SFSIHDGSKAAAL-----LRKQVATLEA 311

Query: 304  DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFEL 363
                K+K D++A   A +     +D  + +++Q  + +E K  + K I+  + + +S   
Sbjct: 312  ----KQKKDKMA---ALNQQNTLSDELQLLKSQHMSIIESKKHLTKLIENDKMQIESLRT 364

Query: 364  QISNLNLSHIDERENKMRIEVERKTNQLAER-EFEINIRQKQSELFAMDQKIKAL-NREK 421
            ++S  ++S  +  E K R+E E     + ER  FE      Q+  F +  +I+ + N  K
Sbjct: 365  KLSEFDVSANEIEEGKERVEKE-----VRERASFE-----NQTLSFILANEIETVGNNLK 414

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQAL 481
             +L            +KA+ E   K+H + I EY       L G+ P  +DL+K++ Q  
Sbjct: 415  RILP-----------RKADRERTYKEHLETI-EY-------LLGKRPDAKDLEKDLLQFK 455

Query: 482  RALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESK------LE 535
                    +L      A+KE +  + KI     ++S  RKD+   +  I +       ++
Sbjct: 456  EEKERNVKELKESRDTANKEFSAAEGKIGVARHHISVRRKDIQKYETTIRAACGDHDLMD 515

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
            +LN              + K   D+++   NI  G   ++  F   A+A   CP C R F
Sbjct: 516  TLNA-------------TEKTIMDLREQLANI-HGAELIYGKFFEKAKASKCCPLCTRGF 561

Query: 596  SAE-EEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS--KET 652
              + + D F  K +       +  + L+ +   ++       +LR    +++KL   K+ 
Sbjct: 562  GEDAQNDAFQGKLQTIMKRIPDQREKLNEKLKKSEEKKV---RLRAAQGDWIKLEALKKD 618

Query: 653  IPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQ 712
            +   EKNL E   E D      D     L +I++    V+ L++P E   RL +E  + Q
Sbjct: 619  VGSIEKNLMEFESEKDHALNRADVASAELIEIESYTNKVDRLLKPAEEMSRLLKECDVLQ 678

Query: 713  KQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
            K + ++               E +L   GS  T  + Q ++E+L                
Sbjct: 679  KNITEI---------------EDELSYMGSTRTLTDCQKDMEEL---------------- 707

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
                     +K       +K+ EE ++  ME+  +++ D   L E     ++  EK +  
Sbjct: 708  --------SLKRVGLDMQLKEYEENMKTHMEQLKKVEHDIAPLEEQVQATTEAHEKAVDA 759

Query: 833  YNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSES 892
            +        R  EE      N + +  M L+ A ++ E+      E       K   +  
Sbjct: 760  W--------RMTEE------NMRAQQNMYLRHADRLDEFNRRIAREEASVGAGKFENTMK 805

Query: 893  EVKSCKIRTDEILVE----LDRFKDIVRNQDQ---IRRNIEDNLNYRETKAKVDKFASEI 945
            E+   +   D + V+    LD+   I +++ +   + R+++D + +RE +  +    +E+
Sbjct: 806  EIADLESLMDRLQVDIKSTLDQINVIEKDEAERRTVERDLQDQITFRERQVDLANCENEL 865

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQY 1005
              L+E+   +  V+    +L K        + +    +G +   +  I R + +L    Y
Sbjct: 866  RQLQEKQGDVD-VALLSEQLKKAQDNETNYIDQRGSIRGELVQMRDQIRRYEAELAN-DY 923

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
              +D R+ +  I +K+ E+A  DL++Y   L  A+M++HT+KM+++NK+IRELW  TY+G
Sbjct: 924  ASVDGRYGELFIDVKSKELAIGDLEKYSKILQMAIMKYHTLKMQDLNKMIRELWVNTYQG 983

Query: 1066 QDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
             DIDYI + +D EG    RS++Y+V+M    +EL MRGRCSAGQKVLAS+IIRLALAETF
Sbjct: 984  GDIDYIEVRADDEGTTANRSFNYRVVMIQNGSELNMRGRCSAGQKVLASIIIRLALAETF 1043

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ 1184
            C+NCG+  LDEPTTNLD  N ESLA ++ RI++ ++GQ NFQ +VITHDE F + + +  
Sbjct: 1044 CVNCGVFTLDEPTTNLDRENIESLAQSIVRIIQRKRGQSNFQFVVITHDEEFVEYLSRYD 1103

Query: 1185 HAEKYYRVAKDD 1196
               +YYRV KDD
Sbjct: 1104 ILGQYYRVKKDD 1115


>gi|303312857|ref|XP_003066440.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta
            SOWgp]
 gi|240106102|gb|EER24295.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta
            SOWgp]
          Length = 1217

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 367/1243 (29%), Positives = 612/1243 (49%), Gaps = 120/1243 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+AIL+NVIF HQDE+ WPL +PS LKKKFD+IF A 
Sbjct: 31   GERTSISSRVAELDQIMPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQ 90

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  +  +  KD A +  +   Q QE+ EAL+ +  E
Sbjct: 91   KYTKAIDNIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHE 150

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
            L K ++   D+ DK        K+     + +  +  +R  + +  Q     L + + + 
Sbjct: 151  LSKEMKKAADLADK------AWKESESYAEILGALEGKRIEV-KSIQTSIDNLKQHLVEV 203

Query: 195  DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
            DE  + W    E  + +  S  ++   ++  +  K   L++NI+    ++    +E G H
Sbjct: 204  DES-EEW---LESTLEQFGSRQAEYREQEESLKEKYVDLKENIERNRHQLGLKQAEYGKH 259

Query: 255  ------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD---- 304
                    R  ER   + +  AR N  +L    F  +     IN    RL  L RD    
Sbjct: 260  ENDKAQFERQVERRGKLIRDIARQN--NLRG--FEGDLDEMEINEFMQRLQKLSRDRNQT 315

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF--- 361
            L+  K+  ++ L+       +       +  +K A  E K      I + + E DS+   
Sbjct: 316  LDRAKREAQVELR-------EVQSLLNRLSQRKSALQEGKNAARNQISQNDKEADSYQHR 368

Query: 362  --ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
              E++I    L+ ++ R  +    +++  ++     +E +++ K +EL +++++   LN 
Sbjct: 369  LNEIEIDEGKLAILESRIEETEGCLQQAKDKAKTASWEKDLQTKNAELRSLEEESSLLNA 428

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL-KGRLPLDRDLKKEIT 478
            E       + D  +L   K EL++ ++  + +   + D+I  ++ +   P +      I 
Sbjct: 429  ELIEGTKKAGDLARLDHLKKELKDRERSLETMASAHGDRISQLISQAWNPSN------IE 482

Query: 479  QALRALLTEFD-DLSSKSRE---ADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL 534
            Q  +++L +    L+   R+   A KE+  +++ ++    +L +H++++D   + I   +
Sbjct: 483  QEFQSVLNDATVSLTKAQRDRDGASKELEYIEVTMKNARKSLQQHKQELDDCVQRIREAI 542

Query: 535  ESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERP 594
            +   ++      Y  V+   +   ++ K   +   G+ +        AR   VC  C R 
Sbjct: 543  DDEPEE------YPDVVKQKQSSLEMAKKDVDQYAGLGEYLGKCLEAARQKKVCRTCGRG 596

Query: 595  FSAEEE--DEFVKKQRV--KAASSAEHMKVLSLE-----SSNADSYFQQLDKLRMVYEEY 645
            F  E+E  D  +K + +  KA  +AE   V+ LE     + NA +Y          Y+ +
Sbjct: 597  FKTEKEFHDFSLKLENLLKKATMNAEDENVVQLEEDLEIARNAQTY----------YDTW 646

Query: 646  VKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
            V+LS  TIP AEK +  L  E ++     +D   ++++    K  +E L + + T  +  
Sbjct: 647  VRLSNTTIPEAEKEISRLELEREELLVKVEDHDAIVSEKGESKRDIESLSKTITTIAKYE 706

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEN 765
             EI+  + Q+ DL       G   RT+EEIQ  ++        L+  + K+ +E+     
Sbjct: 707  GEIKTLKVQIQDLSTKQQQPGSS-RTLEEIQDTIATIGEGCRELKRAIAKITNERDQSRT 765

Query: 766  DLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG----P 821
            +++ ++++   +R E   A   L   KKA   +E  +EE   L+  ++   E +      
Sbjct: 766  EITELELQLRDVRSELDNARFQLD--KKAS--IEARLEEYRNLNTKQRESIEKADHDIES 821

Query: 822  LSKEKEKLLSDYNDLKVKLNREYEEQAEQK-INFQQEIEML------LKIASKIKEYYDL 874
            L  E  K  + ++D+  +        AEQK    QQE+  L      L +AS+    Y+ 
Sbjct: 822  LVPEVSKAQAKFDDINAR--------AEQKERELQQEVSSLSDSLHQLDLASEDIVSYND 873

Query: 875  RKDERFKELQEKKSQSES---EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
            R   R  +L+  K + E+   E++  +     +  +L+     +++ +  +R   DNL Y
Sbjct: 874  RGGPR--QLERSKREVENITKEIEQLEAEQGSLTRQLNAVSARLQDSENTKRQYSDNLRY 931

Query: 932  RETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQT 991
            R     + +  +EI  LE            E +  +   E DR   E N    T +    
Sbjct: 932  RREMRALGEVKAEIARLE--------AQNAEVDRARFKEESDRRTREYNFLSATQASKMG 983

Query: 992  NISRNKIDLKQ------AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
             +      L Q        YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H+
Sbjct: 984  EMKSKDNQLLQLLADWNTDYKDAAFKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHS 1043

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRC 1104
            +KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V+M   DAE++MRGRC
Sbjct: 1044 LKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVVMVKQDAEMDMRGRC 1103

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            SAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q N
Sbjct: 1104 SAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQAN 1163

Query: 1165 FQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            FQLIVITHDE F + +     ++ YYRV++ D Q SIIE Q I
Sbjct: 1164 FQLIVITHDEEFLRHMQCGDFSDYYYRVSRSDKQKSIIERQSI 1206


>gi|295661183|ref|XP_002791147.1| DNA repair protein rad50 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281074|gb|EEH36640.1| DNA repair protein rad50 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1280

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 365/1230 (29%), Positives = 604/1230 (49%), Gaps = 94/1230 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 69   GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 128

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 129  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHE 188

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L K ++         EL  K  ++ +  +  +        E +  Q   + L +   E++
Sbjct: 189  LSKEMR------RAAELADKAWKESESYVQILGTLEGKRIEAKSIQTSISNLQQHLVEVD 242

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKND-MDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE   A+        +RE+ + +  K   L Q I+   A++    +E 
Sbjct: 243  ESDEWLQQALEQFESKQAQ--------DREQEESLKQKYVDLRQLIEDNRAKLGLKQAEY 294

Query: 252  GAH------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
            G H        R  +R   + K  AR N          +    +F+ RIR +LS      
Sbjct: 295  GKHENGKAQFERQLKRREKLIKEIARQNSIRGFGDDLDDMQVNDFMQRIR-KLS------ 347

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            +D+ ++ E A + A     +A      +  +K A  E+K    K I   + E D+++ ++
Sbjct: 348  KDQNQALERARREAQVEQREAQTLLNQLGQRKSALQEVKNAARKQITSNDREADAYQRRL 407

Query: 366  SNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNRE 420
              +++   ++   + RIE  ER  N+  ++     ++  I+ K  E+  ++ +   LN E
Sbjct: 408  DEIDIDEGNKAVLESRIEETERSLNEAKDKAKVASWDSAIQNKTEEIRLLEDESSKLNAE 467

Query: 421  KDVLAGD--SEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEIT 478
              V+ G   + D  +L   K EL++ ++  + +   + ++I+  +         L +E  
Sbjct: 468  --VIEGTKRAGDLARLDHLKRELKDRERSLETMKGAHTERIKKFVTQEWS-PSTLDQEYQ 524

Query: 479  QALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLN 538
             AL A       +  +     +E+     K++    +L + R ++   K+ IE   +S+N
Sbjct: 525  TALEAATNALTHVERERNGIGRELEHTDFKLKTTRKDLLQKRNEL---KQCIEKIRDSVN 581

Query: 539  QQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAE 598
             +    + Y  +L   + + D+ K   +   G+          AR   VC  C RPF  E
Sbjct: 582  DEP---EEYPDILKQRQVQLDMAKKDADQYAGLGDYLSKCMDAARQKKVCRMCSRPFKTE 638

Query: 599  EE--------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKL 648
             E        D  VK+   +AA   E+++ L   LE++ + S F         Y  +V+L
Sbjct: 639  GEFQIFLNKLDALVKRATQEAAD--ENLRQLEEDLETAQSASTF---------YGSWVRL 687

Query: 649  SKETIPVAEK---NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
            S   IP  E+    L    E+L  + +  D ++   A++K D   VE L + V T  +  
Sbjct: 688  SNTEIPALEREEAKLESQREDLLSQIEDHDKIVSKHAELKKD---VESLSKTVATISKYD 744

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRY 762
             EI + + Q+ +L     +  Q V   RT+E+IQ +LS        LQ  + KL  E+  
Sbjct: 745  SEIGILRSQIQEL----STNQQDVMSSRTLEDIQGQLSEIGERSRELQKVISKLSSEKDQ 800

Query: 763  MENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG-- 820
               +++ ++++   +R     A   L   KKA   L   +EE   L+  ++   E +   
Sbjct: 801  SRTEITTLELKLRDVRSNLGNANYQLE--KKAN--LIARVEEYRNLNAKQRESIENADRD 856

Query: 821  --PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
               L  E  K  + Y+D+  +  R  +E  +        +  L     +I  Y +     
Sbjct: 857  IDNLVPEVSKAQARYDDISSRAERREKELHQVASQLSDSLHQLNLANEEITSYIERDGPA 916

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            +    +++    E E+ + +     I  E++     +++ +  +R   DNL YR+  A +
Sbjct: 917  QLSRCEKEVRSIEMEIANLEKEQGSITKEINEISSRLKDSESTKRQYADNLRYRQETAAL 976

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
            +   + IE L  +  ++   S F+ E  +   E + L ++     G M      + +   
Sbjct: 977  EDVNTTIEELTAQNAEVDR-SRFKEESERRTREHNALSAKQASKMGEMKSKDDQLMQLLA 1035

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H++KMEEIN II EL
Sbjct: 1036 DWN-TDYKDAGLKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINCIIEEL 1094

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVLAS+IIR
Sbjct: 1095 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIR 1154

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 1155 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRSRQQQSNFQLIVITHDEEFL 1214

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1215 RHMKCGDFSDYYYRVSRNERQKSIIERQSI 1244


>gi|403162315|ref|XP_003322557.2| hypothetical protein PGTG_04094 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375172554|gb|EFP78138.2| hypothetical protein PGTG_04094 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1359

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 363/1240 (29%), Positives = 625/1240 (50%), Gaps = 118/1240 (9%)

Query: 22   CLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTK 81
             +S +CA+MD EVP  +G+SKAILENVIF HQ+E+NWPL +P++LKKKFD+IF AT+YTK
Sbjct: 185  TISTKCAEMDSEVPRHLGISKAILENVIFCHQEESNWPLSEPASLKKKFDEIFEATKYTK 244

Query: 82   ALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKS 141
            AL+ IK + K+ A E+K  K K   L   K+ A KL+ +I +      A K Q +ELE  
Sbjct: 245  ALDNIKSIKKEAAVELKVDKEKYAALVVDKNRAEKLQNTIDKLTAGISAKKEQYKELEIK 304

Query: 142  IQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEE-----IEDTDE 196
            ++D+ +       + K   +   +   +    STL +++  + A +AE+     +E  D 
Sbjct: 305  VKDLGE-------SNKSFYEQAARFHQVVNEHSTLSDKKANK-AKIAEDLKEDMVEMADS 356

Query: 197  ELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEIT---NLLSEAGA 253
             +       E   +   S   +L   K+++ T    L ++   + A++T    L ++A  
Sbjct: 357  TMSQLHEQREQSKSSLSSHTQRLASAKSELATVEGELTKSRHKHQAKLTEFGQLKAQAQR 416

Query: 254  HMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN-FINRIRSRLSDLERDLEDKKKSD 312
             ++ + ER   I  + + HN+        +NE  +  F N +R R   +   L+  K + 
Sbjct: 417  KLAALGERQKIIVDVSSTHNIPEF-QLEITNEYQVTEFFNLLRDRQKLVVTKLQSTKTAG 475

Query: 313  ELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFE-LQISNLNLS 371
            + A +       +  ++    + QKQA  +  + I   I   +N  D    ++++  ++ 
Sbjct: 476  KKAEEERQTEIYELKNQRGATQQQKQACSDRMSVIRVKI---QNLMDQIGGIKVTKGDIK 532

Query: 372  HIDERENKMRIEVERKTNQLAERE---FEINIRQKQSELFAMDQKIKALNREKDVLAGDS 428
            ++ E    +  ++E   N   E E    +  I+ KQ  +  ++   + L+ E   L  +S
Sbjct: 533  YLSE---NLEAKLESSKNLKEENENAGHDQRIKAKQEGIRQLEDARENLHAELVGLNRES 589

Query: 429  EDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEF 488
            + R KL+LK++++   ++  + +I+E+  K R+++K      +  +KEI   LR      
Sbjct: 590  DTRAKLSLKRSDVMRKQQGIEALIEEHGAKFRELVKMEFA-PKTAEKEIISVLRMTERTL 648

Query: 489  DDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI---- 544
             + +    +  K++   + K+Q    NL+             E++LE+L ++I  +    
Sbjct: 649  SEATQHYTKVTKDMQTNETKLQMNKSNLAS-----------TEAELETLEKKINRVTKGT 697

Query: 545  DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFV 604
                 + D+  E +D+Q+   N    +    +   R ++  + C  C R F  EEE    
Sbjct: 698  SLTSGIRDTELEIQDLQRD-LNAVGFLVAFHEKLLRDSKEPNKCGICHRMFKNEEEMAVF 756

Query: 605  KKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE---EYVKLSKETIPVAEKNLH 661
            ++            KV +   +    +  QL++ + +        KL    I   +K + 
Sbjct: 757  ERHCQNTIDRQPAEKVQN--ETKLQGWKAQLERFKKILPLDISATKLRDTDITNLKKEIS 814

Query: 662  ELTEELDQKSQAFDDVLGVLAQIKADK-----ESVEVLVQPVETADRLFQEIQLWQKQVD 716
             L  + D  S+  ++     A+IK DK       +E+  +    A R+ +EI   Q ++ 
Sbjct: 815  TLESQFDSASRKVEE-----AKIKVDKLKDLIGELEICKRSAADASRMSEEIDELQNEIK 869

Query: 717  DLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQ-------NELEKL---RDEQRY---- 762
            +LE  L+S G   RT +++Q EL       D+LQ        ELE     RD +R     
Sbjct: 870  NLERDLESSGTK-RTADQVQEEL-------DDLQLQIGESKRELESHIADRDRKRMAIHN 921

Query: 763  MENDLSNIQIRWHTLREEKVKAAN---TLRDVKKAEEELEHLMEEKGQLDLDEKLLAEAS 819
            +E+++  +++  ++ R++K +  N      D KK   +LE   +E       E+ L + +
Sbjct: 922  LESEIHQLELNLNSKRQQKKERDNFEAQREDFKKEIADLEQKTKEI------EETLKKFA 975

Query: 820  GPL-SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
             PL +KE E       +++ +      EQ  +  ++ + +  L  I S+I+ + ++    
Sbjct: 976  EPLRAKEIE-----LEEIRAENVAAEAEQTNELQSYNKSLSRLETINSEIQRFNEMDIGA 1030

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQ---IRRNIEDNLNYRETK 935
              +  Q    + ++ V+  K  T +I    D  + + + QD+   + RNI DN+ YR  K
Sbjct: 1031 NSERCQR---EIQALVEKIKAITQQISKLQDDLQALDKEQDRAKALERNITDNIRYRNYK 1087

Query: 936  AKVDKFASEIESLEERVLKIG------GVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
                    EI+ LE+++ +I           ++ E  K       L +E  +  G + + 
Sbjct: 1088 L-------EIQELEDKISRIDVGKAREACQKYDAEYHKAEKWLADLKAEQAKLGGEIGMD 1140

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            + N+ + K++ +++ +KDI KRH  QL+++KT E+AN+DLD+Y  ALD+A+M++H+ KM 
Sbjct: 1141 KNNL-KEKMEERESDFKDIIKRHRAQLVKVKTVEIANQDLDKYAKALDQAIMKYHSHKMA 1199

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            EIN  I+ LW +TY+G DID I I S++E A   RSY+Y+V+M     E++MRGRCSAGQ
Sbjct: 1200 EINDTIQTLWNKTYQGTDIDNISIKSENENAKSNRSYNYRVVMMKDQVEMDMRGRCSAGQ 1259

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLAS+IIRLALAE+F  NCGILALDEPTTNLD  N ++LA +L  I+++R+ Q NFQL+
Sbjct: 1260 KVLASIIIRLALAESFGTNCGILALDEPTTNLDKENIDALANSLAEIIKERRDQANFQLV 1319

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIF 1208
            VITHDE F   +GQ    +KY+RV+++  Q SIIE Q + 
Sbjct: 1320 VITHDEDFLNRLGQADVLDKYWRVSRNQQQKSIIERQRMI 1359


>gi|315056489|ref|XP_003177619.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893]
 gi|311339465|gb|EFQ98667.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893]
          Length = 1274

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 378/1236 (30%), Positives = 600/1236 (48%), Gaps = 138/1236 (11%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 127  GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 186

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 187  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 246

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA--LAE---EIE 192
            L K ++ +       EL  K  ++ +     + A      E +  Q +   L +   E+E
Sbjct: 247  LSKEMRRV------AELADKAWKESESYAEILGALEGKRIEAKSIQTSINNLRQHLVEVE 300

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            ++DE L++    FE   A+  S    L +EK  MD K + +EQN      + T    E G
Sbjct: 301  ESDEWLQSTLEQFESRQAEYRSQEDTL-KEKY-MDLK-ELIEQNRHKLGLKQT----ECG 353

Query: 253  ------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE 306
                  A   R  ER   + K  AR N     +         +F++RI+    +  + LE
Sbjct: 354  KNENDKAQFDRQVERRVRLIKDIARQNNFRGYDGDLDEMEINDFMDRIQKLTKERSQALE 413

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              K+  +  LK       DA      +  +K A  E K    K I   + E D+ +  I+
Sbjct: 414  KAKQEAQSQLK-------DAQSLLNQLSQRKSALQEAKNAAKKQISVNDKESDTIQRSIN 466

Query: 367  NLNL-----SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREK 421
             +++     + I+ R  +    +E++  +     +E +I+Q  SEL +++ K   LN E 
Sbjct: 467  EMDVDEGKRAAIESRMEETEKILEKEKEKAKNASWETDIQQNDSELRSLEDKSSKLNAE- 525

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQAL 481
             ++ G      K A   A L++ KK       E KD+  DVLK    L            
Sbjct: 526  -LIQG-----TKKAGDLARLDHLKK-------ELKDR-DDVLKEASTL------------ 559

Query: 482  RALLTEFDDLSSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL-ESL 537
                     +++  RE D   KE+ ++  K++    +L +H  DV++  + I   + +  
Sbjct: 560  ---------VTTAERERDGTGKELELIDFKLKNARKSLHQHGADVENAAKKINDVIGDEP 610

Query: 538  NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSA 597
             +   ++   Q  LD A++  D    +Y    G+ +  +          VC  C RPF  
Sbjct: 611  EEYPHTVKQKQTELDMARKDAD----QYA---GLGKYLNMCLDAVNDKKVCRTCARPFKT 663

Query: 598  EEEDEFVK---KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIP 654
            E E +  K   K  +K A+  +   V  +E+  A+   + + ++   YE + +L+   IP
Sbjct: 664  ESELQIFKNKLKALIKKATDED--AVAEIEAREAE--LENVREVGTFYETWNRLTNTDIP 719

Query: 655  VAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQ 714
              +K   +L  E +      +D   ++AQ    K  +E L + + T  R   EI   Q Q
Sbjct: 720  ALKKEQSDLETEREVVLTKLEDHDKIVAQRVESKRDIESLSKNIATIVRYNNEISTLQTQ 779

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRW 774
            + +L    +  G   RT+E+IQ E++        L+    KL  E      D+  ++++ 
Sbjct: 780  IQELSAKQEETGTS-RTLEDIQDEIATLGEKSRQLKRASSKLTHELNQSRVDVGKLELKL 838

Query: 775  HTLR----------EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSK 824
              LR          E+K    + + D +    +    +E K   D+ E L+ E S     
Sbjct: 839  RDLRRDLDNVNFQLEKKATLVSRVEDYRNQNLKQREAIE-KADNDI-ESLVPEVS----- 891

Query: 825  EKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASK-IKEYYDLRKD 877
               K  + ++D+  +      EQ E+++  QQE+  L      L +AS+ I  Y      
Sbjct: 892  ---KAQARHDDISTR-----GEQREREL--QQEVSGLNDSLHQLDLASEDITNYI----- 936

Query: 878  ERFKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            ER    Q ++S+ E      E+K  +    ++  EL+     +++ +  +R   DNL YR
Sbjct: 937  ERGGPAQLERSKRELQNISDEIKRLEAEQTDLTRELNSISTRLKDSESTKRQYSDNLRYR 996

Query: 933  ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN 992
            +    +     EI  LE +  ++   S F+ E  ++  E + L ++     G M      
Sbjct: 997  QESKALISVNQEIADLESQNAEVDR-SRFKEESERNTREHNALAAKQASKMGEMKSKDDQ 1055

Query: 993  ISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEIN 1052
            + +   D     YKD   +  +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN
Sbjct: 1056 LMQLLADW-NTDYKDAGAKFKEAHIKVETTKAAVDDLGRYGGALDKAIMKYHGLKMEEIN 1114

Query: 1053 KIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVL 1111
            +II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVL
Sbjct: 1115 RIIGELWQKTYRGTDVDTILIRSDNESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVL 1174

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVIT 1171
            AS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVIT
Sbjct: 1175 ASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRTRQQQANFQLIVIT 1234

Query: 1172 HDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            HDE F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1235 HDEEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1270


>gi|325088021|gb|EGC41331.1| DNA repair protein RAD50 [Ajellomyces capsulatus H88]
          Length = 1298

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 362/1259 (28%), Positives = 598/1259 (47%), Gaps = 160/1259 (12%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 127  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 186

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A ++ E         EAL+ +  E
Sbjct: 187  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRVDE--------IEALRAESHE 238

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L + ++         EL  K  ++ +     +        E +  Q     L E   E++
Sbjct: 239  LSQQMR------RAAELADKAWKESESYAQILGTLEGKRIEAKSIQSSITNLQEHLVEVD 292

Query: 193  DTDEELKNWKNNFEGIVAK-RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE    + RE ++S        +  K   L+Q I+    ++    +E 
Sbjct: 293  ESDEWLERTLEQFESQQTQYREQEVS--------LKEKYVELKQVIEDNRTKLGLKQAEY 344

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+K+  ++N+    +    +     F+ RIR    D  + 
Sbjct: 345  GKHENDKAQFERQLGRREKLIKKIARQNNIRGFDD-DLDDMQVNEFMQRIRKLSKDQNQA 403

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +A      +  +K A  E+K    K I   + E DS++ +
Sbjct: 404  LERARQEAQMELR-------EAQSLLNQLSQRKSALQEVKNAARKQISSNDIEADSYQRR 456

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  N+  E+     ++  I+ K +E+  ++ +   LN 
Sbjct: 457  LDGIDIDEGSKAVLESRIEETERSLNEAKEKAKTASWDSTIQSKTAEIRLLEDESSKLNA 516

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL---PLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 517  ELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTPEWNPSTLDQEYQRA 576

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +A  AL     D    SRE    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 577  LQEATNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLLQRRNEL---KQCIQKIRDA 629

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        AR   VC  C RPF 
Sbjct: 630  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAARQKKVCRMCSRPFK 686

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKL 648
             E E        D  VK+    A   +       LE + + S F         Y+ +V+L
Sbjct: 687  TEGEFQIFLNKLDALVKRATQDAVDESMQQLEADLEVAQSVSTF---------YDTWVRL 737

Query: 649  SKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEI 708
            S   IP  EK   +L  + +      +D   ++++    K++VE L + V T  +   EI
Sbjct: 738  SSTEIPALEKEESQLESQREDLLSQVEDHDKIVSERVESKKNVESLSKTVATISKYDSEI 797

Query: 709  QLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLS 768
            +  + Q+ +L       G G RT+E+IQ ++S         Q  + KL +E+     +++
Sbjct: 798  KTLRSQIQNLLANQQDVG-GTRTLEDIQEQISAIGEKSREFQKVISKLNNEKDQSRTEIT 856

Query: 769  NIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEK 828
             ++++              LRDV+ +     + +E+K  L                    
Sbjct: 857  ALELK--------------LRDVRSSLNNANYQLEKKASL------------------AA 884

Query: 829  LLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD---LRKDERFKELQE 885
             + +Y +L  K  RE  EQA+Q      +IE L    SK +  YD    R   R +ELQ+
Sbjct: 885  RVEEYRNLNAK-QREAIEQADQ------DIESLTPEVSKAQALYDDISSRAGARERELQQ 937

Query: 886  KKSQSESEVKSCKIRTDEILVELDR------------------------------FKDI- 914
            + SQ    +    +  +EI    DR                               KDI 
Sbjct: 938  EASQLSDSLHQLNLTNEEITSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKDIN 997

Query: 915  -----VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
                 +++ +  +R   DNL YR   A ++   + IE L  +  ++      E    +  
Sbjct: 998  AISARLKDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESE-RRT 1056

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
             E + L +      G M      + +   D     YKD   +  +  I+++TT+ A  DL
Sbjct: 1057 REHNALSARQASKMGEMKSKDDQLMQLLADWN-TDYKDAAVKFKEAHIKVETTKAAVDDL 1115

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYK 1088
             RY +ALDKA+M++H++KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+
Sbjct: 1116 GRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYNYR 1175

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V M   DAE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SL
Sbjct: 1176 VCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSL 1235

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            A +LH I++ R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1236 AESLHDIIKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSIIERQSI 1294


>gi|378729964|gb|EHY56423.1| DNA repair protein RAD50 [Exophiala dermatitidis NIH/UT8656]
          Length = 1305

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 352/1244 (28%), Positives = 618/1244 (49%), Gaps = 93/1244 (7%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K++E+ L  I+ H GEK  +S R A++D  +P  +GVS AIL+NVIF HQDE+ WPL DP
Sbjct: 111  KSLENSL-NISRH-GEKSVISSRVAELDIRIPQALGVSAAILDNVIFCHQDESFWPLSDP 168

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            STLKKKFD+IF A +YTKA++ IK++ K   +E+  YK+   + +T KD A K++ ++S+
Sbjct: 169  STLKKKFDEIFEAQKYTKAIDNIKQIRKKHNEELGKYKIMEAHAKTDKDRAVKVQRTMSR 228

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKD-LRKMQDQISTMTARRSTLFEQQQK 182
             QE+ E+++ +++EL       ++KI +     +D  RK +D    + +      E Q +
Sbjct: 229  LQEEVESMRAKVEEL-------EEKIKNARRLAEDAWRKGEDYARILGSLEGKRIEAQGR 281

Query: 183  QYAALA-----EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            Q    +     EE+ + D+ L+   + F+    +   ++ + + E  ++  +IK L +  
Sbjct: 282  QSTIDSLKLHLEEVSEPDDWLQETLDEFQTKQQELRDEMRRRQEEYIELQDRIKELGKER 341

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN-FINRIRS 296
            +           E   H  ++  R   ++++ A+H +    +   S+E+ +  F+ RI+ 
Sbjct: 342  ERKVQLKGKYEQEQEEHERQLVRRKEMVREVAAKHQIRGYDD--LSDESQVEEFLFRIKK 399

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKEN 356
             L D +R   D+ K +  A +    + ++       +  +K A  + K    K +   + 
Sbjct: 400  MLKD-QRTALDRIKLEHTAERREAQTLVN------RLTERKAALQDNKVSTRKQMDINDR 452

Query: 357  ERDSFE-----LQISNLNLSHIDERENKMRIEVERKTNQLAERE-FEINIRQKQSELFAM 410
            E   F+     +++   + + ++ R + +  ++ R+  Q AE   ++  +++  +EL + 
Sbjct: 453  EAADFQRRADKIEVDEGSRAVVESRIDHLNAKI-RQARQAAEASGWDKKLQEASAELRSY 511

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            +     LN E       +E+  +LA  K EL+  ++    +++ + ++I  VL G     
Sbjct: 512  EDLSSRLNDEIVHATKQAEELARLAHLKQELKERQRSLGTLLNAHSERINKVL-GEDWTP 570

Query: 471  RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI 530
              ++K    AL +   E      +     +E++ LQ + + + D+L++ + +     + I
Sbjct: 571  TTVEKVYQGALGSAAGEAASAERERDSVGRELDQLQFRQKTIRDDLARKKAEAGKCDKEI 630

Query: 531  ESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMF-DPFERVARAHHVCP 589
               ++         + Y++ L  A+   +  +       G+   +    E +      C 
Sbjct: 631  RQVVQD------GPEGYEEALQQAQADAEYAREDSGQFAGLHDYYLKVLETLKSEKPACR 684

Query: 590  CCERPFSAEEEDEFVK-KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKL 648
             C R F    +    K K+R++        +  S  S  A++ +++L  L +V E + KL
Sbjct: 685  TCARTFKGPNDPALEKMKKRIEGLVEKTLAQAESTTSKEAEAEYRRLLDLGIVNETFKKL 744

Query: 649  SKETIPVAEKNLHELT---EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
             K  IP AEK+L  L+   E L  K +  D ++      K + ES+   V  +   D   
Sbjct: 745  VKTEIPAAEKDLSTLSGEKEALLAKIEKHDKIVEQRQHAKRELESIGRTVASIAKYD--- 801

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEN 765
             +I+    Q+++       R  G RT+E+I+ EL+         QN + +LR EQ     
Sbjct: 802  ADIKSLNAQIEEYSAKQSQRAGG-RTLEDIREELNAVAEKVRATQNLINRLRTEQEQSRV 860

Query: 766  DLSNIQIRWHTLREEKVKAANTLRDVKKAE-----EELEHLMEEKG----QLDLD-EKLL 815
             LS +++    L+ E       L   KKA      EE   L +++     +LD D EKL 
Sbjct: 861  TLSTMELELRDLKGELSNVGFQLE--KKASLAARVEEFRALNQKQRATLEKLDQDIEKLD 918

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLR 875
             E +   +K        Y D+  + + + +E + ++    + +  L  +  +++ Y D  
Sbjct: 919  PEIATAKAK--------YEDVDQRASAKEQEMSYEQSKLSESVSGLDILNDQVRSYVDRD 970

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
               +   +  + +  E E++  + +  ++  ++++  D +R+ +  RR   DNL YR+  
Sbjct: 971  GPNQLARINRELAHLERELERMQGQQSQLTRDINKINDQIRDSEATRRRYSDNLRYRQET 1030

Query: 936  AKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSV------- 988
              + +   EIE LE +  +      F+ E  K   E ++L +      G M         
Sbjct: 1031 RALAQLRIEIEELESKNAE-ADRDRFQKESEKWTHEHNKLSALQAGVMGEMKSKDAQLVE 1089

Query: 989  ----YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFH 1044
                Y+T++S   I  K+A             I+++ T+ A +DL RY  ALDKA+M++H
Sbjct: 1090 LLQDYKTDLSDAAIRYKEAH------------IKVEATKAAVEDLGRYGGALDKAIMKYH 1137

Query: 1045 TMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GAGTRSYSYKVLMQTGDAELEMRGR 1103
            ++KMEEIN II ELW++TY+G D+D I I +D+E G G RSY+Y+V+M    AE++MRGR
Sbjct: 1138 SLKMEEINSIIEELWRKTYKGTDVDTIMIRADNESGRGNRSYNYRVVMVKRGAEMDMRGR 1197

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+IIRLALAE F  NCG++ALDEPTTNLD  N ESLA +L  I++ R+ Q 
Sbjct: 1198 CSAGQKVLASIIIRLALAECFSANCGLIALDEPTTNLDRENIESLAHSLRDIIKYRQQQA 1257

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NFQLI+ITHDE F + +   +    YYR+++D  Q+SII  Q I
Sbjct: 1258 NFQLIIITHDEDFLRQMDCAEFTGYYYRISRDQMQNSIIRRQSI 1301


>gi|240281885|gb|EER45388.1| DNA repair protein RAD50 [Ajellomyces capsulatus H143]
          Length = 1421

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 365/1261 (28%), Positives = 601/1261 (47%), Gaps = 164/1261 (13%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 250  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 309

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A ++ E         EAL+ +  E
Sbjct: 310  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRVDE--------IEALRAESHE 361

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L + ++         EL  K  ++ +     +        E +  Q     L E   E++
Sbjct: 362  LSQQMR------RAAELADKAWKESESYAQILGTLEGKRIEAKSIQSSITNLQEHLVEVD 415

Query: 193  DTDEELKNWKNNFEGIVAK-RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE    + RE ++S        +  K   L+Q I+    ++    +E 
Sbjct: 416  ESDEWLERTLEQFESQQTQYREQEVS--------LKEKYVELKQVIEDNRTKLGLKQAEY 467

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+K+  ++N+    +    +     F+ RIR    D  + 
Sbjct: 468  GKHENDKAQFERQLGRREKLIKKIARQNNIRGFDD-DLDDMQVNEFMQRIRKLSKDQNQA 526

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +A      +  +K A  E+K    K I   + E DS++ +
Sbjct: 527  LERARQEAQMELR-------EAQSLLNQLSQRKSALQEVKNAARKQISSNDIEADSYQRR 579

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  N+  E+     ++  I+ K +E+  ++ +   LN 
Sbjct: 580  LDGIDIDEGSKAVLESRIEETERSLNEAKEKAKTASWDSTIQSKTAEIRLLEDESSKLNA 639

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL---PLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 640  ELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTPEWNPSTLDQEYQRA 699

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +A  AL     D    SRE    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 700  LQEATNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLLQRRNEL---KQCIQKIRDA 752

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        AR   VC  C RPF 
Sbjct: 753  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAARQKKVCRMCSRPFK 809

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYV 646
             E E        D  VK+    A    E M+ L   LE + + S F         Y+ +V
Sbjct: 810  TEGEFQIFLNKLDALVKRATQDAVD--ESMQQLEEDLEVAQSVSTF---------YDTWV 858

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +LS   IP  EK   +L  + +      +D   ++++    K++VE L + V T  +   
Sbjct: 859  RLSSTEIPALEKEESQLESQREDLLSQVEDHDKIVSERVESKKNVESLSKTVATISKYDS 918

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EI+  + Q+ +L       G G RT+E+IQ ++S         Q  + KL +E+     +
Sbjct: 919  EIKTLRSQIQNLLANQQDVG-GTRTLEDIQEQISAIGEKSREFQKVISKLNNEKDQSRTE 977

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            ++ ++++              LRDV+ +     + +E+K  L                  
Sbjct: 978  ITALELK--------------LRDVRSSLNNANYQLEKKASL------------------ 1005

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD---LRKDERFKEL 883
               + +Y +L  K  RE  EQA+Q      +IE L    SK +  YD    R   R +EL
Sbjct: 1006 AARVEEYRNLNAK-QREAIEQADQ------DIESLTPEVSKAQALYDDISSRAGAREREL 1058

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDR------------------------------FKD 913
            Q++ SQ    +    +  +EI    DR                               KD
Sbjct: 1059 QQEASQLSDSLHQLNLTNEEITSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKD 1118

Query: 914  I------VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK 967
            I      +++ +  +R   DNL YR   A ++   + IE L  +  ++      E    +
Sbjct: 1119 INAISARLKDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESE-R 1177

Query: 968  HLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
               E + L +      G M      + +   D     YKD   +  +  I+++TT+ A  
Sbjct: 1178 RTREHNALSARQASKMGEMKSKDDQLMQLLADWN-TDYKDAAVKFKEAHIKVETTKAAVD 1236

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYS 1086
            DL RY +ALDKA+M++H++KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+
Sbjct: 1237 DLGRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYN 1296

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V M   DAE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  
Sbjct: 1297 YRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIR 1356

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQE 1206
            SLA +LH I++ R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q 
Sbjct: 1357 SLAESLHDIIKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSIIERQS 1416

Query: 1207 I 1207
            I
Sbjct: 1417 I 1417


>gi|225558965|gb|EEH07248.1| DNA repair protein rad50 [Ajellomyces capsulatus G186AR]
          Length = 1454

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 362/1261 (28%), Positives = 605/1261 (47%), Gaps = 156/1261 (12%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 275  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 334

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + Q++ EAL+ +  E
Sbjct: 335  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKLQDEIEALRAESHE 394

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L + ++         EL  K  ++ +     +        E +  Q     L E   E++
Sbjct: 395  LSQQMR------RAAELADKAWKESESYAQILGTLEGKRIEAKSIQSSITNLQEHLVEVD 448

Query: 193  DTDEELKNWKNNFEGIVAK-RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE    + RE ++S        +  K   L+Q I+     +    +E 
Sbjct: 449  ESDEWLERTLEQFESQQTQYREQEVS--------LKEKYVELKQVIEDNRTRLGLKQAEY 500

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+++  ++N+    +    +     F+ RIR    D  + 
Sbjct: 501  GKHENDKAQFERQLGRREKLIKEIARQNNIRGFDD-DLDDMQVNEFMQRIRKLSKDQNQA 559

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +A      +  +K A  E+K    K I   + E DS++ +
Sbjct: 560  LERARQEAQMELR-------EAQSLLNQLSQRKSALQEVKNAARKQISSNDIEADSYQRR 612

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  N+  E+     ++  I+ K +E+  ++ +   LN 
Sbjct: 613  LDGIDIDEGSKAVLESRIEETERSLNEAKEKAKAASWDSTIQSKTAEIRLLEDESSKLNA 672

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL---PLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 673  ELIEGTKRAGDLARLDHFKKELKDRERSLETMEGAHSDRIKKFLTPEWNPSTLDQEYQRA 732

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +A  AL     D    SR+    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 733  LQEATNALTRVERDRDGVSRQ----LEHAEFKLKTTRKDLLQRRNEL---KQCIQKIRDA 785

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        AR   VC  C RPF 
Sbjct: 786  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAARQKKVCRMCSRPFK 842

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYV 646
             E E        D  VK+    A    E M+ L   LE++ + S F         Y+ +V
Sbjct: 843  TEGEFQNFLNKLDALVKRATQDAID--ESMQQLEEDLEAAQSVSTF---------YDTWV 891

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +LS   IP  EK   +L  + +      +D   ++++    K++VE L + V T  +   
Sbjct: 892  RLSSTEIPALEKEESQLESQREDLLSQVEDHDKIVSERVESKKNVESLSKTVATISKYDS 951

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EI+  + Q+ +L       G G RT+E+IQ ++S         Q  + KL +E+     +
Sbjct: 952  EIKTLRSQIQNLLANQQDVG-GTRTLEDIQEQISAIGERSREFQKVISKLNNEKDQSRTE 1010

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            ++ ++++              LRDV+   +   + +E+K  L                  
Sbjct: 1011 ITALELK--------------LRDVRSNLDNANYQLEKKASL------------------ 1038

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD---LRKDERFKEL 883
               + +Y +L  K  RE  EQA+Q      +IE L    SK +  YD    R   R +EL
Sbjct: 1039 AARVEEYRNLNAK-QREAIEQADQ------DIESLAPEVSKAQALYDDISSRAGAREREL 1091

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDR------------------------------FKD 913
            Q++ SQ    +    +  +E++   DR                               KD
Sbjct: 1092 QQEASQLSDSLHQLSLTNEEVMSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKD 1151

Query: 914  I------VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK 967
            I      +++ +  +R   DNL YR   A ++   + IE L  +  ++      E    +
Sbjct: 1152 INAISARLKDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESE-R 1210

Query: 968  HLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
               E + L +      G M      + +   D     YKD   +  +  I+++TT+ A  
Sbjct: 1211 RTREHNALSARQASKMGEMKSKDDQLMQLLADWN-TDYKDAAVKFKEAHIKVETTKAAVD 1269

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYS 1086
            DL RY +ALDKA+M++H++KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+
Sbjct: 1270 DLGRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYN 1329

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V M   DAE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  
Sbjct: 1330 YRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIR 1389

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQE 1206
            SLA +LH I++ R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q 
Sbjct: 1390 SLAESLHDIIKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSIIERQS 1449

Query: 1207 I 1207
            I
Sbjct: 1450 I 1450


>gi|154275250|ref|XP_001538476.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414916|gb|EDN10278.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1261

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 360/1259 (28%), Positives = 599/1259 (47%), Gaps = 152/1259 (12%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 82   GERTSISSRMAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 141

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + Q++ EAL+ +  E
Sbjct: 142  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKLQDEIEALRAESHE 201

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L + ++         EL  K  ++ +     +        E +  Q     L E   E++
Sbjct: 202  LSQQMR------RAAELADKAWKESESYAQILGTLEGKRIEAKSIQSSITNLQEHLVEVD 255

Query: 193  DTDEELKNWKNNFEGIVAK-RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE    + RE ++S        +  K   L+Q I+     +    +E 
Sbjct: 256  ESDEWLERTLEQFESQQTQYREQEVS--------LKEKYVELKQVIEDNRTRLGLKQAEY 307

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+++  ++N+    +    +     F+ RIR    D  + 
Sbjct: 308  GKHENDKAQFERQLGRREKLIKEIARQNNIRGFDH-DLDDMQVNEFMQRIRKLSKDQNQA 366

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +A      +  +K A  E+K    K I   + E DS++ +
Sbjct: 367  LERARQEAQMELR-------EAQSLLNQLSQRKSALQEVKNAARKQISSNDIEADSYQRR 419

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  N+   +     ++  I+ K +E+  ++ +   LN 
Sbjct: 420  LDGIDIDEGSKAVLESRIEETERSLNEAKGKAKAASWDSTIQSKTAEIRLLEDESSKLNA 479

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL---PLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 480  ELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTQEWNPSTLDQEYQRA 539

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +A  AL     D    SRE    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 540  LQEATNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLLQRRNEL---KQCIQKIRDA 592

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        AR   VC  C RPF 
Sbjct: 593  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAARQKKVCRMCSRPFK 649

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKL 648
             E E        D  VK+    A   +       LE++ + S F         Y+ +V+L
Sbjct: 650  TEGEFQIFLNKLDALVKRATQDAVDESMQQLEEDLEAAQSVSTF---------YDTWVRL 700

Query: 649  SKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEI 708
            S   IP  EK    L  + +      +D   ++++    K++VE L + V T  +   EI
Sbjct: 701  SSTEIPALEKEESHLESQREILLSQVEDHDKIVSERVESKKNVESLSKTVATVSKYDSEI 760

Query: 709  QLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLS 768
            +  + Q+ +L       G G RT+E+IQ ++S         Q  + KL +E+     +++
Sbjct: 761  KTLRSQIQNLLANQQDVG-GTRTLEDIQEQISAIGEKSREFQKVISKLNNEKDQSRTEIT 819

Query: 769  NIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEK 828
             ++++              LRDV+   +   + +E+K  L                    
Sbjct: 820  ALELK--------------LRDVRNNLDNANYHLEKKASL------------------AA 847

Query: 829  LLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD---LRKDERFKELQE 885
             + +Y +L  K  RE  EQA+Q      +IE L    SK +  YD    R   R +ELQ+
Sbjct: 848  RVEEYRNLNAK-QREAIEQADQ------DIESLAPEVSKAQALYDDISSRAGARERELQQ 900

Query: 886  KKSQSESEVKSCKIRTDEILVELDR------------------------------FKDI- 914
            + SQ    +    +  +EI    DR                               KDI 
Sbjct: 901  EASQLSDSLHQLSLTNEEITSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKDIN 960

Query: 915  -----VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
                 +++ +  +R   DNL YR   A ++   + IE L  +  ++      E    +  
Sbjct: 961  AISARLKDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESE-RRT 1019

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
             E + L +      G M      + +   D     YKD   +  +  I+++TT+ A  DL
Sbjct: 1020 REHNALSARQASKMGEMKSKDDQLMQLLADWN-TDYKDAAVKFKEAHIKVETTKAAVDDL 1078

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYK 1088
             RY +ALDKA+M++H++KMEEIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+
Sbjct: 1079 GRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYNYR 1138

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V M   DAE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SL
Sbjct: 1139 VCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSL 1198

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            A +LH I++ R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1199 AESLHDIIKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSIIERQSI 1257


>gi|189197015|ref|XP_001934845.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980793|gb|EDU47419.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1306

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 347/1240 (27%), Positives = 610/1240 (49%), Gaps = 110/1240 (8%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GEK  +S R A++D+ +P  +GVSKAIL+NVIF HQ+++ WPL D STLKKKFD+IF A 
Sbjct: 123  GEKHSISTRVAELDQIIPQYLGVSKAILDNVIFCHQEDSLWPLSDASTLKKKFDEIFEAM 182

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA+E IK + KD+        ++L  L  ++  A + +    + +++   L +++++
Sbjct: 183  KYTKAIENIKGIRKDR-------NIELGQLNIIEANAKEDKTRAKKSEDRQAKLFDEIEK 235

Query: 138  LEKSIQDIDDKIHHTELTLKD----LRKMQDQISTMTARRSTLFEQQQKQYAALAE---E 190
            L     D+D K    +    D      + +  ++ + A+R TL   +Q   A L +   E
Sbjct: 236  LRDMYTDLDAKCTEAQQKASDSYNHAARFEQIVAQLEAKRMTLNINKQN-VAELQDSMKE 294

Query: 191  IEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA---EITNL 247
            + ++DEEL++  + +E  VA   + +++L+ E ++     + LEQN  A  A   EI   
Sbjct: 295  LGESDEELQSMLDQYEERVATYATQVAELKEEYHEFK---QHLEQNRGALGAKQSEIGKY 351

Query: 248  LSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLS-DLERDLE 306
             ++   H  +M +R++TI++   RH +    +   + +    F  +I S++S D  R LE
Sbjct: 352  EAQKEQHERQMQQRENTIKEAAKRHAIRGF-DYDITEKQVPEF-QQILSKMSRDQNRALE 409

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKE-KENERDSFELQI 365
              ++  +  L+ A       N R   +   K+A    ++ I+ + K   E +R   +++ 
Sbjct: 410  RAREETQRDLRDAQGVLNKLNTRKSGLSQSKEA---ARSQIMTNDKRISELQRTMNQIKA 466

Query: 366  SNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLA 425
               + + + ER+  +  +++  T   A   +E  I +    L  ++ + + L  E    +
Sbjct: 467  DEGSEAILQERKQDVEKQLQDATAASASERYEERISEAARNLQTLEDRKERLTAEFGDAS 526

Query: 426  GDSEDRVKLALKKAEL--ENH-----KKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEIT 478
              + +   + +K+ EL  + H     KK H K + +  D   D      P        + 
Sbjct: 527  KQARESASIDVKREELGRQQHSLATMKKVHGKRLSQLVDSEWD------PAT------LE 574

Query: 479  QALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI---ESKLE 535
               + +L+E    + K +EA    ++ Q K+ +V   LS        K++ +   E+K++
Sbjct: 575  ATFQQVLSE---KAGKVKEAASRRDIAQTKLDKVNFQLSSSESQAKQKRKELQKYETKVK 631

Query: 536  SLNQQ--IFSIDTYQKVLDSAKEKRDVQKSKYNIA-DGMRQMFDPFERVARAHHVCPCCE 592
               Q+  +   D   + L+   E     K+K++   D M +  +  E+    H++C  C 
Sbjct: 632  EAIQKDDVSDFDETLQQLEEEYEASSSDKAKFDAQIDYMTKCLESAEK----HNICRLCT 687

Query: 593  RPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVKLS 649
            R    +E+++F     +K           ++++ NAD  F +L+  R     YE   +L 
Sbjct: 688  RSLHDDEDEDFTTAGFIKKLKDIIAKAKNTMQADNADEIFAELEAARNAKPSYELATRLR 747

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQ 709
            +  +P  +K +  L  E D  ++  ++   V+  ++A+K+ VE L + V++    +  +Q
Sbjct: 748  QNELPDIQKTITNLASERDTLNKQLEEQDAVIHDLEAEKQEVEALSKEVQSIVGYYTRVQ 807

Query: 710  LWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKL---RDEQRYMEND 766
              + ++ +L     S G   R ++ IQ +L        + +N L++L   RD+ R   N 
Sbjct: 808  ELEVEIKELAQKQKSAGLS-RGIDAIQSDLQQVSDDGRSARNTLDQLVAARDKAR---NL 863

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            ++++++    +  E   A + L++ +   E +E    E        + L +    ++ E 
Sbjct: 864  ITSLELSVRDINAELHNAQSKLKEKRALAERIEEFKRENNNQREAMRSLDQDMDNINPEI 923

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEK 886
            E+    Y+D+  + N       ++     + +  L K   +I  Y      ++ +     
Sbjct: 924  EQAQYKYDDINRRGNDRVHRTHDEASKLSESLRQLEKANEEINAYISRGGPQQLERTHRD 983

Query: 887  KSQSESEVKSCKIRTDEILVELDR----FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFA 942
                + E+   +I TD  +V L R     +D +R+ D  RR I +NL YR+ K  ++   
Sbjct: 984  IENLQGEI--VRIETD--MVNLTRKIKKLEDTMRDTDMSRRTITENLRYRKAKRSLETLQ 1039

Query: 943  SEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI--DL 1000
             EIE LE                     ERD+   E       +   Q NI +  +  D+
Sbjct: 1040 IEIEKLE-----------------GEGAERDKEHYEREAEHWDLKYRQLNIDKTGVERDM 1082

Query: 1001 KQAQ-------------YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMK 1047
            K                YKD  +++ +  I+++TT+ A +DL RY  ALDKA+M++HT+K
Sbjct: 1083 KNKDDQLTELMEEYSNLYKDSAQQYREAHIRVETTKAAIEDLGRYAGALDKAIMKYHTLK 1142

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAG 1107
            MEEIN+I+ ELW+  Y+G D+D IRI SD +G G R Y+Y+V+M   D E++MRGRCSAG
Sbjct: 1143 MEEINRILAELWRNAYQGTDVDTIRIASDGDGKGNRVYNYRVVMIKQDTEMDMRGRCSAG 1202

Query: 1108 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQL 1167
            QKVLAS++IRLALAE F  NCG++ALDEPTTNLD  N + LA +L +I++ R+ Q NFQL
Sbjct: 1203 QKVLASIVIRLALAECFGTNCGLIALDEPTTNLDQQNIKGLAESLSQIIQTRRKQANFQL 1262

Query: 1168 IVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            +VITHDE+F + +    + + Y+RV +D  Q S IE Q I
Sbjct: 1263 LVITHDEQFLREMNCADYTDSYWRVGRDVKQESYIERQNI 1302


>gi|119500032|ref|XP_001266773.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181]
 gi|119414938|gb|EAW24876.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181]
          Length = 1306

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 354/1219 (29%), Positives = 618/1219 (50%), Gaps = 72/1219 (5%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+A+L++VIF HQDE+ WP+ +PS LKK+FD+IF A 
Sbjct: 127  GERTAISSRVAELDQILPQYLGVSRAVLDSVIFCHQDESLWPMSEPSVLKKRFDEIFEAM 186

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ EAL+ +  +
Sbjct: 187  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEALRAETHQ 246

Query: 138  LEKSIQDI----DDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIED 193
            L + ++ +    D     +E   + L  ++ +     + +ST+     K++     E++D
Sbjct: 247  LSQEMRRVAELADKAWKESESYARVLGTLEGKRIEAKSLQSTI--DNLKRHLV---ELDD 301

Query: 194  TDEELKNWKNNFEGIVAKRESDISKLEREK-NDMDTK--IKFLEQNIDAYTAEITNLLSE 250
             DE L++   N E   +K+     + E +K N M+ K  I+   Q +    AE     ++
Sbjct: 302  PDEWLQS---NLEQFESKQLQYQQQEEAQKENYMEIKDRIEQARQKLGVKQAEYGKYEND 358

Query: 251  AGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKK 309
              A+  R  ER   + +  AR HN+    N     +   +F+ +IR  L +  + LE  K
Sbjct: 359  K-ANFERQVERRQRMTREIARSHNIRGFDNIQDQTDID-DFMRKIRKLLKEQNQALERVK 416

Query: 310  KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLN 369
            +  +  L+       +       I  +K A  E K    + I   + E  +++ +++ ++
Sbjct: 417  REAQTELR-------EVQSTLNEIGQRKSALQESKNAAKRQIGANDKEASNYQAKLNEID 469

Query: 370  LSHIDERENKMRIE-VERKTNQLAEREFEINIRQK----QSELFAMDQKIKALNRE---K 421
            +    +   +  IE +  + N   +R    ++ Q+     SEL A++ +   LN E    
Sbjct: 470  VDEGVQAAVEANIEDISSRLNDAKDRARSASLDQEIQDVNSELHALEDEGTRLNAELIEA 529

Query: 422  DVLAGDSE--DRVKLALKKAE--LENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
               AGD    D +K  LK+ E  LE  K  H + + +Y      +     P    L++E 
Sbjct: 530  TKRAGDFARLDHLKKELKERERSLETMKAAHGERLAKY------IGANWGPAT--LEQEF 581

Query: 478  TQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESL 537
             + L        +  S+    ++E+  ++ K++     L++ +K+++S    I    E++
Sbjct: 582  QRVLEEETRNVSNAESQRDGVNRELEQVEFKLKTAKKTLAQRQKELNSCATEIR---EAI 638

Query: 538  NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSA 597
            N++    + Y   L   + + DV +     + G+   F      A+    C  C+R F A
Sbjct: 639  NEEP---EEYPDALKQRQAQLDVARRDAEQSAGLGDYFMRCLETAKQVKACRLCQRAFRA 695

Query: 598  EEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVKLSKETIP 654
            + E    +K+       A+    + +E  + + +  +LD  R V   Y+ + +LSK  IP
Sbjct: 696  DAEFNVFQKRLEGLVKKAQ----IGVEEEDVERFEAELDAARAVSTAYDTWTRLSKTEIP 751

Query: 655  VAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQ 714
              EK   +   + D+     ++   ++++    K  VE L + V T  R   EI+  + Q
Sbjct: 752  DLEKEEDQYVLQRDELLDQLENHDKIVSEKVEKKRDVEALSKTVNTIVRYESEIKTIRSQ 811

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRW 774
            + DL           RT+E+IQ E++G       L+  L KL +++     +++N++++ 
Sbjct: 812  IQDLSANQQD-NTATRTLEDIQEEIAGIGEKTRALKKTLSKLTNDREQARTEMNNLELQ- 869

Query: 775  HTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLL---S 831
              LR+ + +  N    +++  + L  + E K   +   + +A+A   + +   +LL   +
Sbjct: 870  --LRDARSRLDNAKFQLERKSDLLARIEEYKNLNNQQREAIAKADRDIEELTPELLKYQA 927

Query: 832  DYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQS 890
             Y+D+  ++  RE E Q  Q I+   E    L +A++  + Y+ R      E   ++ Q+
Sbjct: 928  QYDDISQRVEAREREMQ--QGISQLSESIRQLDLATEEIDSYNERGGPSQLERSRRELQT 985

Query: 891  -ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLE 949
             E+E+   +     I  E+++    +++ +  +R   DNL YR+    + + ++EIE L 
Sbjct: 986  IETEISQLEAEQANITKEINKISAQLKDSENTKRQYSDNLTYRQATRVLAEVSAEIEDLA 1045

Query: 950  ERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDID 1009
             +  ++   S F+ E  +   E + L ++     G M      + +   D     YKD  
Sbjct: 1046 AQNAEVDR-SRFKEESERRTREHNALAAKQASKMGEMKSKDDQLMQLLADWN-TDYKDAA 1103

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
             ++ +  I+++TT+ A  DL RY  ALDKA+M++H++KMEEIN II ELWQ+TYRG D+D
Sbjct: 1104 SKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINAIIGELWQKTYRGTDVD 1163

Query: 1070 YIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
             I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIRLALAE F +NC
Sbjct: 1164 TILIRSDNENAKGNRSYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNC 1223

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1188
            G++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +     ++ 
Sbjct: 1224 GLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRHMQCGDFSDY 1283

Query: 1189 YYRVAKDDHQHSIIEAQEI 1207
            YYRV++++ Q SIIE Q I
Sbjct: 1284 YYRVSRNEKQKSIIERQSI 1302


>gi|440637483|gb|ELR07402.1| hypothetical protein GMDG_02537 [Geomyces destructans 20631-21]
          Length = 1319

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 351/1246 (28%), Positives = 614/1246 (49%), Gaps = 120/1246 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+AIL++VIF HQDE+ WP+ +PS LK+KFD+IF A 
Sbjct: 134  GERTTISSRVAELDQIMPQYLGVSEAILDSVIFCHQDESLWPMSEPSVLKRKFDEIFEAL 193

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA+E IK + K+Q   +  +K+  +  +T KD   +  +   Q Q++ E L+ + + 
Sbjct: 194  KYTKAIENIKTVRKNQGIALAKHKMFEDQYKTEKDRGERAEKKSIQLQDEIEKLRTESEH 253

Query: 138  LEKSIQ-DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDE 196
            L + +Q  +D    +T    K  ++ Q  ++ +  +R      Q ++     ++++D   
Sbjct: 254  LTRDMQVALDSARENT----KQAQEFQGIVNELKNKRY-----QAERRREDVDDLKDNLT 304

Query: 197  ELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMS 256
            EL+      E ++A+ E  +     E+         L + +     +    L+E G + +
Sbjct: 305  ELQESDQKLEDMLARSEDTMETNRAEEQSYQESYAELRKELGLCRQKQAGRLAEQGQYKA 364

Query: 257  -------RMNERDSTIQKLFARHNL----GSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
                   ++ +R+  +++   +H +    G + +   ++     FI+R+     D  R+L
Sbjct: 365  EKENYDRQITDREKLVKEAARKHQVRGYEGDIDDGLINS-----FIDRMGKLAKDKSREL 419

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            E  ++S E       D   +A     ++++++ A  + K    + + +      S +  I
Sbjct: 420  ERIQQSLE-------DDLREAQSILTSLQSRRSACTQDKVNARQLVTDNNKRIVSMQDSI 472

Query: 366  SNLNLSHIDERE--------NKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKAL 417
             N+    IDE E        +++R ++ + TN   +  ++  ++ + S+L  ++ +   L
Sbjct: 473  GNI---QIDEGEKAKLESTLSELREKLNKSTNDAEQSGWDKLLQSENSKLRDLEVERSRL 529

Query: 418  NREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
            N +    +  +EDR +L   + EL++ ++    +   Y DK+  ++        D  K  
Sbjct: 530  NDQLVQSSRMAEDRAQLDYYRKELKDRQRSLDTMKATYGDKLSSIVG-------DDWKAT 582

Query: 478  TQALRALLTEFDDL----SSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE-- 531
            T     L  +F D     +S ++EA  + ++   ++Q+V   L   R   DS+KR +E  
Sbjct: 583  T-----LAADFQDALDQKTSATQEAQIQRDVTVQEMQQVEFKLLTAR---DSRKRKLEEM 634

Query: 532  ---------SKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVA 582
                     S L    Q + +I+ Y   L   +  RD+ KS  +    + + +      A
Sbjct: 635  KSCEKAVLNSILSPEGQALPTIEDYLPELSKLESDRDLIKSDIDNFTHLNKFWSGCIETA 694

Query: 583  RAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVY 642
               + C  C+R F   E+   + K R K A  A   + L++E    +        +R  Y
Sbjct: 695  ERENQCHLCDRKFQPGEKSATISKLRSKLAKDAR--ETLTVELKEMEDMCGDAQAVRSQY 752

Query: 643  EEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES---VEVLVQPVE 699
            E +V+LS   +P  EK++ +L    DQ+S     + G    ++ ++ +   +E L + V 
Sbjct: 753  ETHVRLSTAELPALEKDIKKLD---DQRSTLIKRLEGQDNSVREEESAKLDIESLAKSVS 809

Query: 700  TADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKL--- 756
            T  R   +I  +++Q+  +       G  + ++ +IQ +        D L++++ KL   
Sbjct: 810  TIVRYVTDITGFEEQIASIASQQKLSGSHL-SVNDIQSQQEICNKKSDELKSQIAKLVKE 868

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEK----GQ---LD 809
            +DE R      S I +    LR+   K       +++ EE L+ + E K    GQ   ++
Sbjct: 869  KDESR------SRINLLELDLRDAGSKMVEANHQMQRKEELLQRIQEMKEVNAGQQEAIN 922

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQ-QEIEMLLKIASK- 867
              +  L      +   + KL +  N+ K K      E+A    +F+  E    L++A K 
Sbjct: 923  RADSSLKSLEPEIKNAEAKLTNIRNEGKTK------EKAVGDESFKISETVNKLRLADKA 976

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            I++Y D     + K  ++     E E+        ++  + +  K+ + N ++I+RNI D
Sbjct: 977  IRDYIDDDGPGKLKACEQSIIDLEREISRIDAEISDVTEKANAIKEQIDNSERIKRNISD 1036

Query: 928  NLNYRETKAKVDKFASEIESLEER-----VLKIGGVSTFETELGKHLLERDRLLSEVNRC 982
            N+ YR+ K  +D   +EI  LE R     +L++        E  K  +   +LL+     
Sbjct: 1037 NIKYRKFKRALDVLNAEIVELELRNANEDLLRLS------REAEKQNMRHQKLLANRGPI 1090

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
             G M      +    +D  + +YKD  K + +  I+++ T+ A +DL RY  ALD+A+M+
Sbjct: 1091 LGAMRAKDDELRGILLDW-ETEYKDAAKNYRESHIKVEITKAAIEDLARYGTALDQAIMK 1149

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRS-YSYKVLMQTGDAELEMR 1101
            +H++KMEEIN+I  ELWQ TY+G D+D I I SD+E A  RS Y+Y+V M   DAE++MR
Sbjct: 1150 YHSLKMEEINRIAGELWQSTYQGTDVDTILIRSDAENAAGRSNYNYRVCMVKQDAEMDMR 1209

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQ+VLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ 
Sbjct: 1210 GRCSAGQRVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHGIIRTRQA 1269

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            Q NFQLIVITHDE F + +      + YYR+++DD Q SIIE Q I
Sbjct: 1270 QSNFQLIVITHDEEFLRYMKCADFCDHYYRISRDDKQKSIIERQTI 1315


>gi|392574394|gb|EIW67530.1| hypothetical protein TREMEDRAFT_33359 [Tremella mesenterica DSM 1558]
          Length = 1312

 Score =  369 bits (948), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 347/1251 (27%), Positives = 633/1251 (50%), Gaps = 92/1251 (7%)

Query: 1    MEYKAIESVLQTINPHTGE--KVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            +  K +E +L   + + GE  +  +S +C++MD E+P L+GVSKAILENVIF HQ++++W
Sbjct: 108  LTMKTLEGILAKTDENGGEGKRNTISTKCSEMDEELPLLLGVSKAILENVIFCHQEDSSW 167

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL D S+LKK+FD+IF ATRYTKAL+ IK + K++  E+K  K +L  L+  K+ A ++R
Sbjct: 168  PLSDASSLKKRFDEIFEATRYTKALDNIKAIRKERTAELKVDKERLNFLKADKNKAERMR 227

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
              + +  E+ +  + +++ L +  ++I              +    +   +  R++ L +
Sbjct: 228  AELKKAIEEEQEKQEEVERLREKFEEIKQVNMQYYAEASGFQSKFQEAENLKIRKNMLEK 287

Query: 179  QQQKQYAALAEEIEDTDEELK---NWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQ 235
             QQ+    + E  E T E L+   N+  + + +  ++   +   ++E+  M+ +++  E+
Sbjct: 288  NQQRTLEGMKEMTESTKELLEMIANFDQHLKSLEGRKMRLVESRDKEEASME-ELRRRER 346

Query: 236  NIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIR 295
            N+ +       L++    +   + ER+  +++    HN      +P      + FI+   
Sbjct: 347  NLASTQG---GLIANRKIYERNLKERELAVREAAKIHNYAGYDYSPLEENKIVEFID--- 400

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG-------IL 348
              L DL R  E ++K      K+  D      D  + ++    A+ E  A        I+
Sbjct: 401  -ILHDLVRRAETEQK------KVQMDGARKERDLQRELDRLAAARTETMATKKSKQDHIV 453

Query: 349  K---HIKEKENERDS-----FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
            K   +I+ KE + +S      E+++    L+  +E   ++  ++         RE  + I
Sbjct: 454  KFNENIRTKEAQFESVSSVNVEVELLEGKLAEAEEVRARLENDISESRYDETIREKSLAI 513

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
            RQK+++   ++ ++  LNR+ D        R +L++K+ EL++   +    +  +  K +
Sbjct: 514  RQKETDRDKINAELAILNRQSD-------SRAQLSIKRNELQSKSSQVIASVASHSAKFK 566

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
            +++   L  +  ++++IT +      E  +  + +  +++ ++ LQ  I      L+  R
Sbjct: 567  ELVGTDLEAE-SMEEKITLSAGRRDRELVEAEAAASASNRTLSQLQTSINIAKSTLATKR 625

Query: 521  KDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFER 580
             ++   ++ IE+ L   ++        +   +        QK+  N AD M++ +     
Sbjct: 626  DELRRLEQAIEAGLSESSKSTIEEAISEAEEELEYR----QKNLLN-ADAMKEHWAKMLE 680

Query: 581  VARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
            V +  H C  C+R   A +E  F K  + ++K  S+A  +K +  E    + +  +LDKL
Sbjct: 681  VGKTKHKCLGCDRSLLASDEKAFEKYVQLQLKRFSTA-GLKEMQEEE---EGWKLELDKL 736

Query: 639  RMV--YEEYVK-LSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
            R +   E  VK L ++ IP  E  + + ++ L+++ +  ++    + + K     ++ L 
Sbjct: 737  RKLQPSELTVKELKEQIIPTLETQISDESKRLEKEQEEVEETKVRVGKAKLVVRDLQTLK 796

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
                   R+  E +  +  V  LE  L+S G  ++T+EE+Q E+    +    LQ E + 
Sbjct: 797  NAASMISRILGETKDLENDVKRLERDLESSG-SLKTVEEVQGEVERVTNEIKTLQREQQT 855

Query: 756  LRDEQRYMENDLSNIQ--IRWHTLREEKVKAANTLRD-----VKKAEEELEHLMEEKGQL 808
            L  E+    N L + Q  I   TLR  ++K     R+     +K+ ++++  L  E  +L
Sbjct: 856  LSSEKELKLNSLRSQQDDITRKTLRLNQLKGQQERREREEAALKELQDQVIALQAELKEL 915

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN---FQQEIEMLLKIA 865
            D      A+A+    +E    LS +     ++ R+  E  +  +N   +Q  +  L    
Sbjct: 916  D----TAAQAADAPWREMNDTLSRH-----RVERQNAEN-DAGLNVGMYQSSLHELEGKH 965

Query: 866  SKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNI 925
                 Y     D R +E + +  + + ++ S       +  ++ + +D +  Q  ++ NI
Sbjct: 966  RACVTYVAEGNDRRMRENEAQIDEIKRDLISASETRSSLETQISKVQDELSRQGAVKSNI 1025

Query: 926  EDNLNYRETKAKVDKFASEIESLE-ERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQG 984
              N+ YRE   ++DK   ++E+++ E++ K      F T+    L E  ++ +   R QG
Sbjct: 1026 NANITYREQAREIDKVQEDLEAIDLEQMAK--SRREFNTKYSAKLEEETKVQNSWQRAQG 1083

Query: 985  TMSVYQTNISRNKIDLKQA---QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALM 1041
             +      I++N+  L++     YK++D+   DQLI+ K +E AN DL++Y  ALD A++
Sbjct: 1084 LL----VGINQNREKLEKTLEEDYKNVDRLFRDQLIKTKVSETANNDLEKYGKALDNAIL 1139

Query: 1042 RFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQTGDAE 1097
            R+H++KM+EIN ++  LW   Y+G DID I+I SD + A +    +SY+Y+V+M   D E
Sbjct: 1140 RYHSIKMDEINSLLAHLWGIVYQGTDIDCIKIMSDHDEASSTSTRKSYNYRVVMVKNDVE 1199

Query: 1098 LEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG-PNAESLAAALHRIM 1156
            L+MRGRCSAGQKVLAS+IIRLALAE+F   CG+LALDEPTTNLD   N  SLA AL  I+
Sbjct: 1200 LDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLDAYENINSLAEALAEII 1259

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             +R+ Q NFQL+VITHDE F Q +      E Y+RV++D +Q+S++E Q +
Sbjct: 1260 RERRRQANFQLVVITHDEAFLQRLAAHDVLEYYWRVSRDSNQNSVLERQRV 1310


>gi|358058196|dbj|GAA95988.1| hypothetical protein E5Q_02646 [Mixia osmundae IAM 14324]
          Length = 1310

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 349/1236 (28%), Positives = 605/1236 (48%), Gaps = 121/1236 (9%)

Query: 22   CLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTK 81
             LS + A++D EVP  +GVSKAILENVIF HQ+++NWPL +PS LKKKFDDIF AT+YTK
Sbjct: 134  TLSTKAAELDEEVPIHLGVSKAILENVIFCHQEDSNWPLSEPSILKKKFDDIFEATKYTK 193

Query: 82   ALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKS 141
            AL+ I+   K+   E+K  K +   L+  ++ + K+   + +   + E  + Q++ L   
Sbjct: 194  ALKSIQDTRKESVVELKIEKERESALKIDRERSDKIERGLEKLDGEIERKEAQLERLTAD 253

Query: 142  IQDIDD--------KIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIED 193
            I+ +D          + H ++    + K Q     MT  R T+   +          +E+
Sbjct: 254  IRKLDSDTKDFYERAVKHNDI----ISKAQTLQHRMTTTRETMANLETNMTL-----LEE 304

Query: 194  TDEELKNWKNNFEGIV---AKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSE 250
            TD+EL      F+  +    +R  + ++ + ++ D+  +   L  +++A   E+ +L + 
Sbjct: 305  TDDELTAKMQGFQQTLETNGERRREKARAKAKEEDVYAR---LGSSLNARATELGSLSAR 361

Query: 251  AGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKK 310
                 +   ER + +Q+L  RH++    ++  S++  ++F    R RL +  R LE +  
Sbjct: 362  LQEQDTARQERATLVQELGIRHDISGFSSSQISDDMVVDF----RRRLQNAYRALESEIA 417

Query: 311  SDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNL 370
            + ++  K    S  DA  + ++ ++ +QA        L+ +  ++  R    ++I+  ++
Sbjct: 418  ALKITHKRKQGSIADARRKLESDQSNEQA--------LRRVTGEKTARTQQSIKITEESI 469

Query: 371  SHIDERENKMRI-EVERKTNQ----LAERE-----FEINIRQKQSELFAMDQKIKALNRE 420
              ID  E  +   E + K+ +    LAE+E     ++  I Q Q +   ++ K +   +E
Sbjct: 470  RAIDINETAIAFTEADLKSAKDRLMLAEKEMKDANYDATIAQLQFDDRELEDKRETAQKE 529

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQA 480
               L   +  R +LA+K+ +    +    K+I +   K   +L G + +     ++++ A
Sbjct: 530  FASLQSQAGVRAELAIKRQDAGRRQTALDKLIADNNVKATALLGGGI-VSATFDEQVSTA 588

Query: 481  LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE---SKLESL 537
            L        D S +     +   + + + ++ ++ +S+ R+ VD   R +E   SK + +
Sbjct: 589  LA-------DKSEQLAVVQRTAAVSERQQKDCSETISRLRRQVD---RLLEDQRSKQKEI 638

Query: 538  NQQIFSIDTYQKVLDSAKEKR-DVQKS-----KYNIADGMRQMFDPFERVARAHHVCPCC 591
               +   D Y  + ++ +  R ++Q S     +  ++ G       + +  R    C CC
Sbjct: 639  KDGLADTDGYASIAEAIERDRAELQSSQDELGRQQVSSGFYDNLLEYGKKGR----CFCC 694

Query: 592  ERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKE 651
             RP S E      K  R K     + +K L  E  +  ++    ++L  +  +  +L + 
Sbjct: 695  RRPMSPEAILVHDKNLRDKIRDIPDQIKQLEGERDSWQTFLADWERLLPIENDLKRLEEI 754

Query: 652  TIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLW 711
             +P A+  L    ++L       +   G ++ +K     ++VL +      RL +E+Q  
Sbjct: 755  DLPKAQTELKGAEDKLTAADYDLESARGRMSDLKLGVSDLQVLKRAAIDMARLGRELQGL 814

Query: 712  QKQVDDLEYMLDSRGQGVRTMEEIQLE---LSGSLSTKDNLQNELEKLRDEQR----YME 764
               V DLE  L   G  ++T+ ++Q E   LSG +  K      L   +D+Q      M 
Sbjct: 815  NADVADLETSLAHTGS-IKTVADVQTELDALSGQMKEKKREMQLLANKKDQQNRLITGMR 873

Query: 765  NDLSNIQIRWHTLREEKVKAA---NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP 821
              +S  Q++ +  + +  + A   NTL   +K     +  MEE  Q       L    GP
Sbjct: 874  ETVSTCQMKLNQQKNDLARRAELQNTLAAAQKDVGASKIAMEEGRQ------RLQAMQGP 927

Query: 822  LSKEKEKL---LSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
            L   +++L   L+D++        E      +     + +  L  +A +++ Y     + 
Sbjct: 928  LDAARDELEQALADHSS-------EVAVHTTKLGGLDKSLSSLDALAQRVQRYETDGTEA 980

Query: 879  RFK----ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRET 934
            + +     +++ ++Q +   K+ K  TDEI   LD+     ++    +RN+EDN  YR  
Sbjct: 981  KLRACEAAIKDIEAQRKGGQKTIKALTDEI-AALDKQSSEAQS---YQRNLEDNQRYRNY 1036

Query: 935  KAKVDKFASEIESLE----ERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQG--TMSV 988
            K ++ K   E+  L+     R  K      FE        E++    +  +  G   MS 
Sbjct: 1037 KKELAKSNDELSDLDVESANRAKK-----QFEASYTASRAEQESKSGQQAKLAGELEMSR 1091

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
             Q    R ++D    +YKDI KRH DQ+I +KT +MA  D+++Y  ALD A+M +H+ KM
Sbjct: 1092 QQQKERRGELD---EEYKDIRKRHLDQVINVKTLDMAIHDMEKYGKALDSAIMAYHSAKM 1148

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG-TRSYSYKVLMQTGDAELEMRGRCSAG 1107
            +EIN IIRELW +TY G DID I I SD +GA   R+Y+Y+V+M     +++MRGRCSAG
Sbjct: 1149 QEINNIIRELWTKTYTGSDIDKIAIVSDGDGATKARTYNYRVVMDKDGVQMDMRGRCSAG 1208

Query: 1108 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQL 1167
            QKVLAS+IIRLALAE+F  +CGI+ALDEPTTNLD  N  SLA AL  I+++RK  + FQL
Sbjct: 1209 QKVLASIIIRLALAESFSASCGIMALDEPTTNLDRANIASLAIALSDIVKERKNAK-FQL 1267

Query: 1168 IVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            I+ITHDE     +G   H ++YY V +++++ S+IE
Sbjct: 1268 IIITHDEELLNHLGGSSHIDRYYYVKRENNR-SVIE 1302


>gi|327294469|ref|XP_003231930.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892]
 gi|326465875|gb|EGD91328.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892]
          Length = 1279

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 369/1239 (29%), Positives = 595/1239 (48%), Gaps = 140/1239 (11%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 120  GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 179

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 180  KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 239

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ-------KQYAALAEE 190
            L K ++ + D      L  K  ++ +     + A      E +        KQ+     E
Sbjct: 240  LSKEMRRVAD------LADKAWKESESYAEILGALEGKRIEAKSIQSINNLKQHLV---E 290

Query: 191  IEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSE 250
            ++++DE L++    FE   A+ ++    L +EK  MD K + +EQN      + T    E
Sbjct: 291  VDESDEWLRSTLEQFESRQAEYQNQEESL-KEKY-MDLK-ELIEQNRHKLGLKQT----E 343

Query: 251  AG------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
             G      A   R  ER   + K  AR N     +         +F++R++    +  + 
Sbjct: 344  RGKNENDKAQFDRQVERRVRLIKDIARQNNFRGYDCDLDEIEINDFMDRVQRLTKERNQA 403

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  K+  +  LK       DA      +  +K A  E+K    K I   + E D+ + +
Sbjct: 404  LEKAKRESQNQLK-------DAQTLLNQLSQRKSALQEVKNSAKKQISMNDKEADAIQRR 456

Query: 365  ISNLNLSH-----IDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
            I  +++       I+ R  +    +E++ ++     +E +I++  +EL  +++K   LN 
Sbjct: 457  IDEIDVDEGKRAVIEARMEETEKNLEKEKDKAKNASWESDIQKNDTELRLLEEKSCKLNA 516

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            E       + D  +L   K EL++ ++  + +   + D+I  ++             I Q
Sbjct: 517  ELIQGTKKAGDLARLDHLKKELKDRERSLETMSSAHGDRISKLVDSSWS-----PSNIEQ 571

Query: 480  ALRALLTEFDDL-SSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
              + +L E   L ++  RE D   KE+ ++  K++ V  NL +H  DV +  + I     
Sbjct: 572  RYQDVLKEASTLVTTAERERDGTGKELELIDFKLKNVRKNLQQHSADVQNAAKKIN---- 627

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVC-PCCERP 594
                        + + D  +E     K K    D  R+  D +  +    + C       
Sbjct: 628  ------------ETIGDEPEEYPHTVKQKQTELDMARKDADHYAGLGEYLNKCLDAANDK 675

Query: 595  FSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIP 654
              A +ED                  V  +E+  AD   + +  +   YE +++L+   IP
Sbjct: 676  KKATDED-----------------VVAEIEAREAD--LENVRGVGTFYETWIRLAGTDIP 716

Query: 655  VAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQ 714
              +K    L  E +      ++   ++ Q    K  +E L + V T  R   EI   Q Q
Sbjct: 717  ALKKEQSGLETEREGVLAKLEEHDRIVDQRVESKRDIESLSKNVATISRYNNEILTLQTQ 776

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRW 774
            + DL    +  G   RT+E+IQ              +E+  L ++ R ++   S +    
Sbjct: 777  IQDLSAKQEETGTS-RTLEDIQ--------------DEIATLGEQSRSLKRISSKLT--- 818

Query: 775  HTLREEKVKAAN---TLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLS 831
            H L + +V A      LRD+++  + +   +E+K  L      + E     SK++E + +
Sbjct: 819  HELNQSRVDAGKLELKLRDLRRELDNVNFELEKKATL---VSRVEEYRNQNSKQRETIEN 875

Query: 832  DYNDLK------VKLNREYEE---QAEQK-INFQQEIEML------LKIASK-IKEYYDL 874
              ND++       K    YE+   + EQ+    QQEI  L      L +AS+ I  Y   
Sbjct: 876  ADNDIEGLDPEVSKAQARYEDISARGEQREKELQQEISGLNDSLHQLDLASEDITNYI-- 933

Query: 875  RKDERFKELQEKKSQSE-----SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
               ER    Q ++S+ E      E+KS +    ++  EL+     +++ +  +R   DNL
Sbjct: 934  ---ERGGPAQLERSKRELQDILDEIKSLEAEQTDLTRELNNISTRLKDSESTKRQYSDNL 990

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
             YR+    +     EI  LE +  ++   S F+ E  ++  E + L ++     G M   
Sbjct: 991  RYRQESKALINVNREIADLESQNAEVD-RSRFKEESERNTREHNALAAKQASKMGEMKSK 1049

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
               + +   D     YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H +KME
Sbjct: 1050 DDQLMQLLADW-NTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGLKME 1108

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            EIN+II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQ
Sbjct: 1109 EINRIIGELWQKTYRGTDVDTILIRSDNESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQ 1168

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLI
Sbjct: 1169 KVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLI 1228

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            VITHDE F + +      + YYRV++++ Q SIIE Q I
Sbjct: 1229 VITHDEEFLRSMQCGDFCDYYYRVSRNERQKSIIERQSI 1267


>gi|296412283|ref|XP_002835854.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629650|emb|CAZ80011.1| unnamed protein product [Tuber melanosporum]
          Length = 1345

 Score =  366 bits (940), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 339/1250 (27%), Positives = 615/1250 (49%), Gaps = 130/1250 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S RCA++D+ +P  +GVSKA+LE VIF HQDE+ WPL +P+ LKK+FD+IF A 
Sbjct: 162  GERSTISSRCAELDQVMPQYLGVSKAVLEYVIFCHQDESLWPLSEPAVLKKRFDEIFEAL 221

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+   K+ LE  +T KD   + +    +  ++ E+++ ++ E
Sbjct: 222  KYTKAIDNIKILRKKQNEELGNLKILLEQYRTDKDRGERAKRRSDELHDEIESMRLEVTE 281

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
            L + I +I   +          +  ++ I+T+ A++              A  +E   +E
Sbjct: 282  LSRQISEI---VAQQAQLFATAKGFEETIATLNAKKQE------------ARTMETYIDE 326

Query: 198  LKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNL---------- 247
            +     +FE      ESD ++LER +++   ++   +++I+A  A+   +          
Sbjct: 327  ISQHLTHFE------ESD-AELERMQHEYGKRMNTYQEHIEAKKAKYVEVDRDLDRVRRR 379

Query: 248  ----LSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
                L+E G       A  +++ ER+  I+++  RH +    ++   +     FI+++  
Sbjct: 380  LGEKLTEEGRIQAEQTAFEAQLVEREKLIKEISRRHGIRGF-DSQLDDSQIREFIDKVSG 438

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKEN 356
               D    LE  K+ +   ++ A +   +  ++ +++   K         +   +   + 
Sbjct: 439  MSRDQSLTLERIKRENAEEMRGAQEELNEIINKRRSLTGLKDHHQSSGRSVDDTLAALQQ 498

Query: 357  ERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE-------FEINIRQKQSELFA 409
            E DS ++          + +E  ++ +++ K +Q A  E       F+ +IR + S+L  
Sbjct: 499  ELDSIDVN---------EGQEAILKSQLQDKEHQHATAEQSFRNSSFDGSIRAENSKLRG 549

Query: 410  MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPL 469
            ++ +++++  E       +++R KL   K ELE  +   + +    K+KI D L  +   
Sbjct: 550  IEDELESVTTELAKGTKQADERAKLGFLKKELETRRMALETMSVANKEKI-DRLIDQPWT 608

Query: 470  DRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRF 529
               ++ ++ + L     E  + +S     ++E+  ++ +I    D +   + +    +R 
Sbjct: 609  ASTVESQLQRVLSNRQDELTEATSLRDGVNQELGNIETRINIAKDGIRTKKLEASRCERE 668

Query: 530  IESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCP 589
            + +  ++  Q+   I  Y  V +  ++     +++       +Q F+   +  + H  C 
Sbjct: 669  VRAAYDAEEQE--DIRQYPGVAEEVEKNLTEARTRLEQVGFYKQYFETAVKTLQEHGSCV 726

Query: 590  CCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK-LRMV------Y 642
             C R F    E    +K   +  ++    ++ S+ ++N +   ++L++ L+ +      +
Sbjct: 727  LCRRNF----ESALDRKNFQELVTT----RLQSVMTANTEDIIRELEEDLKHIKDAAPSF 778

Query: 643  EEYVKLSKETIPVAEKNLHELT-------EELDQKSQAFDDVLGVLAQIKADKE-SVEVL 694
              + +L++  +P  E +L +L        EE +Q  +         A  KA K+   E L
Sbjct: 779  GSWKRLTEIELPKLEADLQKLNQTKELLLEEYNQHEKN--------ATEKAHKKFEAESL 830

Query: 695  VQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELS----GSLSTK---D 747
              PV    +  +EI  ++KQV+D   +L   G G RT+EE+Q E+     G+   K   +
Sbjct: 831  RAPVAEIAKYTREISNYEKQVEDASRLLQELG-GSRTIEEMQSEMQRLNDGAKVIKRRIN 889

Query: 748  NLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQ 807
             L  E E  R     ++  + ++++++  L  +  KA + ++ ++  ++E   +M     
Sbjct: 890  VLIAEKETARHSITLLDGQVRDLRMKFGELNFKISKAQDLVKRIESHKQEA--VMHTTAI 947

Query: 808  LDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASK 867
             ++D+K+  E +  + + + K+    +D   K NR   +     +   +    L +    
Sbjct: 948  EEIDQKI-RELAPKIQRAEAKVQMIQDDGAGKENRHQRD----AMKLAESDMQLKRTQHG 1002

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            I  Y +    E+    + +    + EVK  +     I VE++  +          R+I +
Sbjct: 1003 IGNYLNRGGPEQLNRCRHQVQTLQVEVKKHEAEVTSIRVEVNNLEIEEGTATSTERSIHE 1062

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD---------RLLSE 978
            NL +R+ K  ++K   EI  LE +            +  +H  +R+         RL SE
Sbjct: 1063 NLRFRKNKRDLEKLNVEIRELEGK----------NADAERHRFQRNAEVLSDKHMRLSSE 1112

Query: 979  VNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDK 1038
             +   G M      + +   D  Q  Y D  +++ + L +++TT  A  DL +Y  ALDK
Sbjct: 1113 KSAKAGEMRSKDKQLEQLIADY-QTDYADAKQKYKETLAKVQTTTGATNDLAKYGAALDK 1171

Query: 1039 ALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAE 1097
            A+MR+H++KMEEIN+II ELW+ TYRG D+D I I SD+E A G RSY+Y+V M   DAE
Sbjct: 1172 AVMRYHSLKMEEINRIIEELWKSTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAE 1231

Query: 1098 LEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIME 1157
            ++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++
Sbjct: 1232 MDMRGRCSAGQKVLASIIIRLALAECFGINCGLIALDEPTTNLDSDNIRSLAKSLHEIIQ 1291

Query: 1158 DRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             R+ Q NFQLIVITHDE F + +  + + + YYRV+++D Q SIIE Q I
Sbjct: 1292 TRQAQSNFQLIVITHDEDFLKEMQCQDYCDHYYRVSRNDRQKSIIERQSI 1341


>gi|159125506|gb|EDP50623.1| DNA repair protein Rad50 [Aspergillus fumigatus A1163]
          Length = 1303

 Score =  366 bits (940), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 355/1249 (28%), Positives = 610/1249 (48%), Gaps = 132/1249 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+A+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 111  GERTAISSRVAELDQIMPQYLGVSRAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 170

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+              + +   +D+EK +  +     
Sbjct: 171  KYTKAIDNIKALRKKQNEELAKYKI--------------MEQHAKEDKEKADRAE----- 211

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
             ++SI                  K+QD+I ++ A    L  Q+ ++ A LA++     E 
Sbjct: 212  -KRSI------------------KLQDEIESLRAETHQL-SQEMRRVAELADKAWKESES 251

Query: 198  LKNWKNNFEG--IVAKR-ESDISKLEREKNDMDTKIKFLEQNIDAYTA------------ 242
                    EG  I AK  +S I  L+R   ++D   ++L+ N++ + +            
Sbjct: 252  YAQILGTLEGKRIEAKSLQSTIDNLKRHLVELDDPDEWLQSNLEQFESKQLQYQQQEEAQ 311

Query: 243  -----EITNLLSEA-----------------GAHMSRMNERDSTIQKLFAR-HNLGSLPN 279
                 EI + + +A                  A+  R  ER   + +  AR HN+    N
Sbjct: 312  KENYMEIKDRIEQARQKLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDN 371

Query: 280  APFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQA 339
                ++   +F+ +IR  L +  + LE  K+  +  L+       +       I  +K A
Sbjct: 372  IQDQSDID-DFMRKIRKLLKEQNQALERVKREAQTELR-------EVQSTLNEIGQRKSA 423

Query: 340  KMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIE-VERKTNQLAER---- 394
              E K    + I   + E  +++ +++ +++    +   +  IE +  + N   +R    
Sbjct: 424  LQESKNAAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISSRLNHAKDRARSA 483

Query: 395  EFEINIRQKQSELFAMDQKIKALNRE---KDVLAGDSE--DRVKLALKKAE--LENHKKK 447
              +  I+   SEL A++ +   LN E       AGD    D +K  LK+ E  LE  K  
Sbjct: 484  SLDKEIQDMNSELHALEDEGARLNAELIEATKRAGDFARLDHLKKELKERERSLETMKAA 543

Query: 448  HKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQM 507
            H + + +Y      +     P    L++E  + L        +  S+    ++E+  ++ 
Sbjct: 544  HGERLAKY------IGANWNPAT--LEQEFQRVLEEETRNVSNAESQRDGVNRELEQVEF 595

Query: 508  KIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNI 567
             ++     L++ +K+++S    I    E++N++    + Y   L   + + DV +     
Sbjct: 596  NLKTSKKTLAQRQKELNSCATEIR---EAINEEP---EEYPDALKQRQAQLDVARRDAEQ 649

Query: 568  ADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSN 627
            + G+   F      A+    C  C+R F A+ E    +K+       A+    + +E  +
Sbjct: 650  SAGLGDYFMRCLETAKQVKACRLCQRAFRADAEFTVFQKRLEGLVKKAQ----IGVEEED 705

Query: 628  ADSYFQQLDKLRMV---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQI 684
             + +  +LD  R V   Y+ + +LSK  IP  EK   +   + D+     ++   ++++ 
Sbjct: 706  VERFEAELDAARAVSTAYDTWTRLSKTEIPDLEKEEDQYALQRDELLNQLENHDKIVSEK 765

Query: 685  KADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLS 744
               K  VE L + V T  R   EI+  + Q+ DL           RT+E+IQ E++G   
Sbjct: 766  IEKKRDVEALSKTVNTIVRYESEIRTIRSQIQDLSSNQQD-NTATRTLEDIQEEIAGIGD 824

Query: 745  TKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEE 804
                L+  L KL +++     +++N++++   LR+ + K  N    +++  + L  + E 
Sbjct: 825  KTRALKKTLSKLINDREQARTEMNNLELQ---LRDARSKLDNVKFQLERKSDLLARIEEY 881

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLL---SDYNDLKVKLN-REYEEQAEQKINFQQEIEM 860
            K   +   + + +A   + +   +LL   + Y+D+  ++  RE E Q  Q I+   E   
Sbjct: 882  KNFNNQQREAITKADRDIEELTPELLKYQAQYDDISQRVEAREREMQ--QGISQLSERIR 939

Query: 861  LLKIASKIKEYYDLRKDERFKELQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQD 919
             L +A++  + Y+ R      E   ++ Q+ E+E+   +     I  E+++    +++ +
Sbjct: 940  QLDLATEEIDSYNERGGPSQLERSRRELQTIEAEISQLEAEQANITKEINKISAQLKDSE 999

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
              +R   DNL YR+    + + ++EIE+L  +  ++   S F+ E  +   E + L ++ 
Sbjct: 1000 NTKRQYSDNLTYRQATRALAEVSAEIENLAAQNAEVDR-SRFKEESERRTREHNALAAKQ 1058

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
                G M      + +   D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA
Sbjct: 1059 ASKMGEMKSKDDQLMQLLADWN-TDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKA 1117

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            +M++H++KMEEIN II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE+
Sbjct: 1118 IMKYHSLKMEEINAIIGELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKSGAEM 1177

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  
Sbjct: 1178 DMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRA 1237

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1238 RQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNEKQKSIIERQSI 1286


>gi|70993434|ref|XP_751564.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293]
 gi|66849198|gb|EAL89526.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293]
          Length = 1312

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 355/1249 (28%), Positives = 610/1249 (48%), Gaps = 132/1249 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVS+A+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 120  GERTAISSRVAELDQIMPQYLGVSRAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 179

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+              + +   +D+EK +  +     
Sbjct: 180  KYTKAIDNIKALRKKQNEELAKYKI--------------MEQHAKEDKEKADRAE----- 220

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
             ++SI                  K+QD+I ++ A    L  Q+ ++ A LA++     E 
Sbjct: 221  -KRSI------------------KLQDEIESLRAETHQL-SQEMRRVAELADKAWKESES 260

Query: 198  LKNWKNNFEG--IVAKR-ESDISKLEREKNDMDTKIKFLEQNIDAYTA------------ 242
                    EG  I AK  +S I  L+R   ++D   ++L+ N++ + +            
Sbjct: 261  YAQILGTLEGKRIEAKSLQSTIDNLKRHLVELDDPDEWLQSNLEQFESKQLQYQQQEEAQ 320

Query: 243  -----EITNLLSEA-----------------GAHMSRMNERDSTIQKLFAR-HNLGSLPN 279
                 EI + + +A                  A+  R  ER   + +  AR HN+    N
Sbjct: 321  KENYMEIKDRIEQARQKLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDN 380

Query: 280  APFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQA 339
                ++   +F+ +IR  L +  + LE  K+  +  L+       +       I  +K A
Sbjct: 381  IQDQSDID-DFMRKIRKLLKEQNQALERVKREAQTELR-------EVQSTLNEIGQRKSA 432

Query: 340  KMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIE-VERKTNQLAER---- 394
              E K    + I   + E  +++ +++ +++    +   +  IE +  + N   +R    
Sbjct: 433  LQESKNAAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISSRLNHAKDRARSA 492

Query: 395  EFEINIRQKQSELFAMDQKIKALNRE---KDVLAGDSE--DRVKLALKKAE--LENHKKK 447
              +  I+   SEL A++ +   LN E       AGD    D +K  LK+ E  LE  K  
Sbjct: 493  SLDKEIQDMNSELHALEDEGARLNAELIEATKRAGDFARLDHLKKELKERERSLETMKAA 552

Query: 448  HKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQM 507
            H + + +Y      +     P    L++E  + L        +  S+    ++E+  ++ 
Sbjct: 553  HGERLAKY------IGANWNPAT--LEQEFQRVLEEETRNVSNAESQRDGVNRELEQVEF 604

Query: 508  KIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNI 567
             ++     L++ +K+++S    I    E++N++    + Y   L   + + DV +     
Sbjct: 605  NLKTSKKTLAQRQKELNSCATEIR---EAINEEP---EEYPDALKQRQAQLDVARRDAEQ 658

Query: 568  ADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSN 627
            + G+   F      A+    C  C+R F A+ E    +K+       A+    + +E  +
Sbjct: 659  SAGLGDYFMRCLETAKQVKACRLCQRAFRADAEFTVFQKRLEGLVKKAQ----IGVEEED 714

Query: 628  ADSYFQQLDKLRMV---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQI 684
             + +  +LD  R V   Y+ + +LSK  IP  EK   +   + D+     ++   ++++ 
Sbjct: 715  VERFEAELDAARAVSTAYDTWTRLSKTEIPDLEKEEDQYALQRDELLNQLENHDKIVSEK 774

Query: 685  KADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLS 744
               K  VE L + V T  R   EI+  + Q+ DL           RT+E+IQ E++G   
Sbjct: 775  IEKKRDVEALSKTVNTIVRYESEIKTIRSQIQDLSSNQQD-NTATRTLEDIQEEIAGIGD 833

Query: 745  TKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEE 804
                L+  L KL +++     +++N++++   LR+ + K  N    +++  + L  + E 
Sbjct: 834  KTRALKKTLSKLINDREQARTEMNNLELQ---LRDARSKLDNVKFQLERKSDLLARIEEY 890

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLL---SDYNDLKVKLN-REYEEQAEQKINFQQEIEM 860
            K   +   + + +A   + +   +LL   + Y+D+  ++  RE E Q  Q I+   E   
Sbjct: 891  KNLNNQQREAITKADRDIEELTPELLKYQAQYDDISQRVEAREREMQ--QGISQLSERIR 948

Query: 861  LLKIASKIKEYYDLRKDERFKELQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQD 919
             L +A++  + Y+ R      E   ++ Q+ E+E+   +     I  E+++    +++ +
Sbjct: 949  QLDLATEEIDSYNERGGPSQLERSRRELQTIEAEISQLEAEQANITKEINKISAQLKDSE 1008

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
              +R   DNL YR+    + + ++EIE+L  +  ++   S F+ E  +   E + L ++ 
Sbjct: 1009 NTKRQYSDNLTYRQATRALAEVSAEIENLAAQNAEVDR-SRFKEESERRTREYNALAAKQ 1067

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
                G M      + +   D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA
Sbjct: 1068 ASKMGEMKSKDDQLMQLLADWN-TDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKA 1126

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            +M++H++KMEEIN II ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE+
Sbjct: 1127 IMKYHSLKMEEINAIIGELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKSGAEM 1186

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  
Sbjct: 1187 DMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRA 1246

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1247 RQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNEKQKSIIERQSI 1295


>gi|261205742|ref|XP_002627608.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081]
 gi|239592667|gb|EEQ75248.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081]
          Length = 1300

 Score =  365 bits (936), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 351/1230 (28%), Positives = 600/1230 (48%), Gaps = 94/1230 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 116  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 175

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 176  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHE 235

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L + ++         EL  K  ++ +     +        E +  Q     L E   E++
Sbjct: 236  LSQQMR------KAAELADKAWKESESYAQILGTLEGKRIEAKSIQASITNLQEHLVEVD 289

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            ++DE L+   + FE         I   E+E++ +  K   L+Q I+     +    +E G
Sbjct: 290  ESDEWLERTLDQFES------QQIQYREQEES-LKEKYMELKQVIEDNRTRLGLKQAEYG 342

Query: 253  AHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
             H +       ++  R+  I+++  ++N+    +    +    +F+ RIR    D  + L
Sbjct: 343  KHENDKAQFERQLRRREKLIKEIARQNNIRGFDD-DLDDMQVSDFMQRIRKLSKDQNQTL 401

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            E  ++  ++ L+       +       +  +K    E+K    K I   + E DS + ++
Sbjct: 402  ERARREAQMELR-------EVQSLLNQLSQRKSTLQEVKNASRKQISSNDIEADSHQRRL 454

Query: 366  SNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNRE 420
              +++    +   + RIE  ER  ++  E+     ++  I+ K SE+  ++ +   LN E
Sbjct: 455  DEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSEIRLLEDESSKLNAE 514

Query: 421  KDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK---GRLPLDRDLKKEI 477
                   + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ +
Sbjct: 515  LIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTREWNPSTLDQEYQRAL 574

Query: 478  TQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESL 537
             +   AL     D    SRE    +   + K++    +L + R ++   K+ I+   +++
Sbjct: 575  QETTNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLQQRRNEL---KQCIQKIRDAV 627

Query: 538  NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSA 597
            + +      Y  +L   + + D+ K   +   G+ +        A+   VC  C RPF  
Sbjct: 628  DDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAAKQKKVCRMCSRPFKT 684

Query: 598  EEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS 649
            E E        D  VK+    A   +       LE++   S F         Y+ +V+LS
Sbjct: 685  EGEFQIFLNKLDALVKRATQDAVDESMQQLEEDLEAAQGVSTF---------YDTWVRLS 735

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQ 709
               IP  EK   +L  + ++     +D   ++++    K++VE L + V T  +   EI+
Sbjct: 736  TTEIPALEKEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTVATISKYDGEIK 795

Query: 710  LWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSN 769
              + QV DL         G RT+E+IQ ++S        LQ  + KL +E+     +++ 
Sbjct: 796  TLRSQVQDL-LANQQDVSGSRTLEDIQEQISAIGEKSRELQKIISKLNNEKDQSRTEITA 854

Query: 770  IQIRWHTLR----------EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEAS 819
            ++++   +R          E+K   A  + + +K   +    +E K   D+ E L+ E S
Sbjct: 855  LELKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIE-KADHDI-ESLVPEVS 912

Query: 820  GPLSKEKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
                    K  + Y+D+  +   RE+E Q E        +  L     +I  Y +     
Sbjct: 913  --------KAQARYDDIASRAEAREHELQLEAS-QLSDSLHQLDLANEEITSYNERGGPA 963

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            +  + +++    ESE+ S +     I  +++     +++ +  +R   DNL YR   A +
Sbjct: 964  QLIKCEKEVHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRETAAL 1023

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
            +   + IE L  +  ++      E    +   E + L +      G M      + +   
Sbjct: 1024 EDVNATIEELSAQNAEVDRSRFREESE-RRTREHNALSARQASKMGEMKSKDDQLMQLLA 1082

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H++KMEEIN+II EL
Sbjct: 1083 DWN-TDYKDATVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEEL 1141

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVLAS+IIR
Sbjct: 1142 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIR 1201

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q NFQLIVITHDE F 
Sbjct: 1202 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDEEFL 1261

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1262 RHMQCGDFSDYYYRVSRNERQKSIIERQSI 1291


>gi|239611181|gb|EEQ88168.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ER-3]
          Length = 1470

 Score =  364 bits (935), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 352/1231 (28%), Positives = 602/1231 (48%), Gaps = 96/1231 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 291  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 350

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 351  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHE 410

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAE---EI 191
            L + ++   ++ DK        K+       + T+  +R    +  Q     L E   E+
Sbjct: 411  LSQQMRKAAELADK------AWKESESYAQILGTLEGKR-IEAKSIQASITNLQEHLVEV 463

Query: 192  EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            +++DE L+   + FE         I   E+E++ +  K   L+Q I+     +    +E 
Sbjct: 464  DESDEWLERTLDQFES------QQIQYREQEES-LKEKYMELKQVIEDNRTRLGLKQAEY 516

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+++  ++N+    +    +    +F+ RIR    D  + 
Sbjct: 517  GKHENDKAQFERQLRRREKLIKEIARQNNIHGFDD-DLDDMQVSDFMQRIRKLSKDQNQT 575

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +       +  +K    E+K    K I   + E DS + +
Sbjct: 576  LERARREAQMELR-------EVQSLLNQLSQRKSTLQEVKNAARKQISSNDIEADSHQRR 628

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  ++  E+     ++  I+ K SE+  ++ +   LN 
Sbjct: 629  LDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSEIRLLEDESSKLNA 688

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK---GRLPLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 689  ELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTREWNPSTLDQEYQRA 748

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +   AL     D    SRE    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 749  LQETTNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLQQRRNEL---KQCIQKIRDA 801

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        A+   VC  C RPF 
Sbjct: 802  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAAKQKKVCRMCSRPFK 858

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKL 648
             E E        D  VK+    A   +       LE++   S F         Y+ +V+L
Sbjct: 859  TEGEFQIFLNKLDALVKRATQDAVDESMQQLEEDLEAAQGVSTF---------YDTWVRL 909

Query: 649  SKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEI 708
            S   IP  EK   +L  + ++     +D   ++++    K++VE L + V T  +   EI
Sbjct: 910  STTEIPALEKEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTVATISKYDGEI 969

Query: 709  QLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLS 768
            +  + QV DL         G RT+E+IQ  +S        LQ  + KL +E+     +++
Sbjct: 970  KTLRSQVQDL-LANQQDVSGSRTLEDIQEHISAIGEKSRELQKIISKLNNEKDQSRTEIT 1028

Query: 769  NIQIRWHTLR----------EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEA 818
             ++++   +R          E+K   A  + + +K   +    +E K   D+ E L+ E 
Sbjct: 1029 ALELKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIE-KADHDI-ESLVPEV 1086

Query: 819  SGPLSKEKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKD 877
            S        K  + Y+D+  +   RE+E Q E        +  L     +I  Y +    
Sbjct: 1087 S--------KAQARYDDIASRAEAREHELQLEAS-QLSDSLHQLDLANEEITSYNERGGP 1137

Query: 878  ERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAK 937
             +  + +++    ESE+ S +     I  +++     +++ +  +R   DNL YR   A 
Sbjct: 1138 AQLIKCEKEVHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRETAA 1197

Query: 938  VDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNK 997
            ++   + IE L  +  ++      E    +   E + L +      G M      + +  
Sbjct: 1198 LEDVNATIEELSAQNAEVDRSRFREESE-RRTREHNALSARQASKMGEMKSKDDQLMQLL 1256

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
             D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H++KMEEIN+II E
Sbjct: 1257 ADW-NTDYKDATVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEE 1315

Query: 1058 LWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLII 1116
            LWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVLAS+II
Sbjct: 1316 LWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIII 1375

Query: 1117 RLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERF 1176
            RLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q NFQLIVITHDE F
Sbjct: 1376 RLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDEEF 1435

Query: 1177 AQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1436 LRHMQCGDFSDYYYRVSRNERQKSIIERQSI 1466


>gi|327356683|gb|EGE85540.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1485

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 355/1233 (28%), Positives = 605/1233 (49%), Gaps = 100/1233 (8%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 306  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 365

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 366  KYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHE 425

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAE---EI 191
            L + ++   ++ DK        K+       + T+  +R    +  Q     L E   E+
Sbjct: 426  LSQQMRKAAELADK------AWKESESYAQILGTLEGKRIEA-KSIQASITNLQEHLVEV 478

Query: 192  EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            +++DE L+   + FE         I   E+E++ +  K   L+Q I+     +    +E 
Sbjct: 479  DESDEWLERTLDQFES------QQIQYREQEES-LKEKYMELKQVIEDNRTRLGLKQAEY 531

Query: 252  GAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
            G H +       ++  R+  I+++  ++N+    +    +    +F+ RIR    D  + 
Sbjct: 532  GKHENDKAQFERQLRRREKLIKEIARQNNIHGFDD-DLDDMQVSDFMQRIRKLSKDQNQT 590

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++  ++ L+       +       +  +K    E+K    K I   + E DS + +
Sbjct: 591  LERARREAQMELR-------EVQSLLNQLSQRKSTLQEVKNAARKQISSNDIEADSHQRR 643

Query: 365  ISNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNR 419
            +  +++    +   + RIE  ER  ++  E+     ++  I+ K SE+  ++ +   LN 
Sbjct: 644  LDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSEIRLLEDESSKLNA 703

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK---GRLPLDRDLKKE 476
            E       + D  +L   K EL++ ++  + +   + D+I+  L        LD++ ++ 
Sbjct: 704  ELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTREWNPSTLDQEYQRA 763

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            + +   AL     D    SRE    +   + K++    +L + R ++   K+ I+   ++
Sbjct: 764  LQETTNALTRVERDRDGVSRE----LEHAEFKLKTTRKDLQQRRNEL---KQCIQKIRDA 816

Query: 537  LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            ++ +      Y  +L   + + D+ K   +   G+ +        A+   VC  C RPF 
Sbjct: 817  VDDEPAE---YPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAAKQKKVCRMCSRPFK 873

Query: 597  AEEE--------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYV 646
             E E        D  VK+    A    E M+ L   LE++   S F         Y+ +V
Sbjct: 874  TEGEFQIFLNKLDALVKRATQDAVD--ESMQQLEEDLEAAQGVSTF---------YDTWV 922

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +LS   IP  EK   +L  + ++     +D   ++++    K++VE L + V T  +   
Sbjct: 923  RLSTTEIPALEKEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTVATISKYDG 982

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EI+  + QV DL         G RT+E+IQ  +S        LQ  + KL +E+     +
Sbjct: 983  EIKTLRSQVQDL-LANQQDVSGSRTLEDIQEHISAIGEKSRELQKIISKLNNEKDQSRTE 1041

Query: 767  LSNIQIRWHTLR----------EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLA 816
            ++ ++++   +R          E+K   A  + + +K   +    +E K   D+ E L+ 
Sbjct: 1042 ITALELKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIE-KADHDI-ESLVP 1099

Query: 817  EASGPLSKEKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLR 875
            E S        K  + Y+D+  +   RE+E Q E        +  L     +I  Y +  
Sbjct: 1100 EVS--------KAQARYDDIASRAEAREHELQLEAS-QLSDSLHQLDLANEEITSYNERG 1150

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
               +  + +++    ESE+ S +     I  +++     +++ +  +R   DNL YR   
Sbjct: 1151 GPAQLIKCEKEVHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRET 1210

Query: 936  AKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISR 995
            A ++   + IE L  +  ++      E    +   E + L +      G M      + +
Sbjct: 1211 AALEDVNATIEELSAQNAEVDRSRFREESE-RRTREHNALSARQASKMGEMKSKDDQLMQ 1269

Query: 996  NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKII 1055
               D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H++KMEEIN+II
Sbjct: 1270 LLADW-NTDYKDATVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRII 1328

Query: 1056 RELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
             ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M   DAE++MRGRCSAGQKVLAS+
Sbjct: 1329 EELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASI 1388

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDE 1174
            IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q NFQLIVITHDE
Sbjct: 1389 IIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDE 1448

Query: 1175 RFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1449 EFLRHMQCGDFSDYYYRVSRNERQKSIIERQSI 1481


>gi|310790058|gb|EFQ25591.1| hypothetical protein GLRG_00735 [Glomerella graminicola M1.001]
          Length = 1307

 Score =  363 bits (932), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 356/1255 (28%), Positives = 626/1255 (49%), Gaps = 111/1255 (8%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K +E  L  +  + GE+  +S R A MD  +P  +GVS+AIL+ VIF HQDE+ WP+ +P
Sbjct: 109  KTLEGSL--VYNNNGERTVISSRVAQMDEFIPRELGVSRAILDYVIFCHQDESLWPMSEP 166

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLK---DAAYK---- 116
            + LKK+FD IF A RYTKA++ +K L K Q +E+   K+  E  +  K   D A K    
Sbjct: 167  AALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELAKLKIFEEQDRINKEKGDRAEKRSMA 226

Query: 117  LRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL 176
            L+  I + +EK  AL  +M+EL++ I++  ++ +     + DL+  +DQ++         
Sbjct: 227  LQTDIEESREKCTALTLEMEELQEQIREKHEQANSYLNVVNDLKFKRDQLAY-------- 278

Query: 177  FEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQN 236
                  +  ++A+ I+ T EEL       E  +A+ E  +++ E E N+   +   L+++
Sbjct: 279  ------REGSIAD-IKMTLEELFEDDAYLENALAQYEERMARYEEEANENKARYAELQKD 331

Query: 237  IDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNL----GSLPNAPFSNE 285
            +     E++  L+E G H S       ++  R   ++     H      G L +A     
Sbjct: 332  LTQSRRELSAKLAEQGKHQSDKDKYERQLQSRMQLVRDAAGLHGFRGYDGDLKDAQIKA- 390

Query: 286  AALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKA 345
                F  RI+  L++ +RDL+  +K +   L  A     +   R       +    +   
Sbjct: 391  ----FNERIQKLLAEKKRDLDRAQKENARELDEATSVITELEGRKATTTQNRVFAKQRMG 446

Query: 346  GILKHIKEKENERDSFELQISNLNLSH-----IDERENKMRIEVERKTNQLAEREFEINI 400
             I K I       +  ++ I+ L++       +D +   +   +++    L+  +++  +
Sbjct: 447  AIDKRI-------NVLQMDINRLDIDEGAKAILDSQFEDVESRLKKANESLSNADYDNQL 499

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
            +Q+  +L+ ++ + + L RE       + +R +L L+K EL + K+K   + + +K K+ 
Sbjct: 500  QQENEKLWQLESENEKLGRELMECTRLASERAQLDLRKKELSDRKRKLDTLTNTWKPKL- 558

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
            D   G       L+ +  +AL+      + + +++R+    V   Q K+    D   K+ 
Sbjct: 559  DTHVGTAWQTDTLEAKFHEALK----HQNRIVAEARQKRDSVRDKQQKV----DFRLKNA 610

Query: 521  KDVDSK--------KRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMR 572
            KDV +K        +  + S L+++     +ID Y++ +   +E  +   +  ++ D + 
Sbjct: 611  KDVGAKNSDEAQRCRSAVVSALQAVRDGA-TIDDYEEEVKMHEEDVETYATDISLLDALA 669

Query: 573  QMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES------- 625
              +   ++     + C  C+R F   ++   V K R     S + +K L           
Sbjct: 670  DYYRGCQKTLLEKNKCRLCDRSF---DDKSNVAKSRF----SDKLIKFLDPNKKEKAEED 722

Query: 626  -SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEK--NLHELTEELDQKSQAFDDVLGVLA 682
             +N+ +    L K++  YE Y +L  E   V E+  +L    E L+++ +  D ++G   
Sbjct: 723  LANSTALLDSLRKVKAQYETYQRLMAELPSVKEEVASLEYECETLERELEEHDAIVGAEE 782

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
                D ES+   V  +  A    ++I+  + QVD +     S G   R+++EI  EL   
Sbjct: 783  GKLTDIESLNKTVISITQA---LKDIRDSEAQVDRI-MTQQSSGTVSRSVDEIH-ELQAL 837

Query: 743  LSTK-DNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL 801
             + +  +++N++ K   +++ M++ ++++++    LR    KA N L   K  + +++ L
Sbjct: 838  CNEQIRSMKNKISKTTSDRQRMKDQINSLELEKSELRNNLSKALNQLERKKDFQNQIQTL 897

Query: 802  MEEK-GQLDL----DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQ-AEQKINFQ 855
             E++  Q DL    D++L  E+  P   E   +  D     ++  R  E+  AE++    
Sbjct: 898  KEDQVHQRDLIIRADQEL--ESIEPEIAEARSVRDD----TLQRGRAKEQAIAEERDKVA 951

Query: 856  QEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIV 915
              +  L  + + I++Y D          Q   +  E  + S      ++ V  ++ K  +
Sbjct: 952  DSVTELKMVENDIQDYIDRGGPSNLAANQRAIASLEKSIASLDKEISDLTVRTNKLKQDI 1011

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER-DR 974
             N D+ ++NI +NL YR+   +++    +IE LE R        T  TE  K L  R +R
Sbjct: 1012 DNGDRKKQNISNNLKYRQNLQQLEILRRDIEELESRDAD-EDYRTLITE-AKQLENRHNR 1069

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
            L+++     G M   +       +   + +YK   K++ +  I+++TT+ A +DL RY +
Sbjct: 1070 LVADRGSIMGQMKT-KDEELERLLLEWEQEYKSAAKKYRESHIKVETTKAAIEDLGRYIS 1128

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA--GTRSYSYKVLMQ 1092
            ALD A+MR+H++KMEE+N+I  ELWQ TY+G DID I I SD+E A  G RSY+Y+V M 
Sbjct: 1129 ALDTAIMRYHSLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNENATTGRRSYNYRVCMV 1188

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
              D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +L
Sbjct: 1189 KQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESL 1248

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            H I++ R+ Q NFQLIVITHDE F + +      + ++RV +DD Q+S+I  + I
Sbjct: 1249 HAIIKARQAQSNFQLIVITHDEEFLRHMRCNDFCDSFFRVRRDDKQNSVITKESI 1303


>gi|425768648|gb|EKV07166.1| DNA repair protein Rad50 [Penicillium digitatum PHI26]
 gi|425775942|gb|EKV14182.1| DNA repair protein Rad50 [Penicillium digitatum Pd1]
          Length = 1210

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 370/1280 (28%), Positives = 600/1280 (46%), Gaps = 194/1280 (15%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKK+FD+IF A 
Sbjct: 31   GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKRFDEIFEAL 90

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  KD A +  +   + Q++ EAL+ + Q 
Sbjct: 91   KYTKAIDNIKALRKKQNEELGKYKIMEQHAKEDKDKADRAEKRSVKLQDEIEALREETQR 150

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
            +                                        Q+ ++ A LA++     E 
Sbjct: 151  MS---------------------------------------QEMRRVAELADKAWTQSES 171

Query: 198  LKNWKNNFEG--IVAKR-ESDISKLEREKNDMDTKIKFLEQNIDAY-TAEITNLLSEAGA 253
                    EG  I AK  ++ I  L+R   ++D   ++LE  ++ + T ++     E   
Sbjct: 172  FAQVLGALEGKRIEAKSIQTTIDNLKRHLIELDDSDEWLESTLEQFETKQVQYQQQEESQ 231

Query: 254  HMSRMNERDSTIQKLFARHNLG--SLPNAPFSNEAA---------LNFINRIR------- 295
              S M  +D   Q    RH LG     N  F N+ A          N IN I        
Sbjct: 232  KESYMEIKDQIEQ---TRHRLGLKQAENGKFENDKANFERQSQRRQNMINEIARANNIRG 288

Query: 296  -----------SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK 344
                       + +  ++R L ++ +S +   + A     +  +    I  +K A  E K
Sbjct: 289  LGEKIDQSEIDTFMQKIKRLLREQNQSLDRVKREAQRELREVQETLNEIGQRKSALQETK 348

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDER-ENKMRIEVERKTNQLAEREFEINIRQK 403
                + I   ENE  +++     LN   +DE  +  +  +VE  T+ L   +        
Sbjct: 349  NAAKRQIAANENEATTYQ---KKLNEIEVDEGFQAALESKVEDITSNLEHAKDRAKTASW 405

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHK---KIIDEYKDKIR 460
              ++   + +I+ L  E   L  +  D  K A + A L++ KK+ K   + +   K    
Sbjct: 406  DQDIQDANAEIRRLEDENSRLNSELIDSTKKAGELARLDHLKKESKDRERSLQTMKGAYS 465

Query: 461  DVLKGRLPLD---RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS 517
            D L+  +  D     L++   QAL     +  D+  +     +E+  ++ K++    NL 
Sbjct: 466  DRLEKAIGSDWKPETLERGFQQALDIESKQVADVERERDGVSRELEHVEFKLKTAKKNLK 525

Query: 518  KHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            + +K++D   + I + +++   +      Y +++   + + D+ +   +   GM +    
Sbjct: 526  QQQKELDECVKEIHNAVDAEPSE------YPEIVKERQAQYDLARKDADQYAGMGEYLTK 579

Query: 578  FERVARAHHVCPCCERPFSAEEE--------DEFVKKQRVKAASSAEHMKVL--SLESSN 627
                A+   +C  C+R F  E E        D  VKK  + A    E +K L   LE++ 
Sbjct: 580  CLDAAKRTKLCRTCQRSFKNEAELQTFTKKLDALVKKAGLDAED--ETLKSLEEDLETAR 637

Query: 628  ADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD 687
            A S           Y+ +V+LS+  IP  E+   E   + DQ  +  +   G ++++   
Sbjct: 638  AAS---------ASYDTWVRLSETVIPELEQEEQECESQRDQLLEKLETQDGKVSEMTES 688

Query: 688  KESVEVLVQPVETADRLFQEIQLWQKQVDDLEY-MLDSRGQGVRTMEEIQLELSGS---- 742
            K  VE L + V T  R   EI+  + Q+ +L     DS     RT+E+IQ E++ +    
Sbjct: 689  KRDVEGLAKTVSTIARYDVEIKTIRSQIQELSTKQQDS--STARTLEDIQEEIASNNEKS 746

Query: 743  ----------LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWH-----TLREEKVKAANT 787
                       + K+  ++E+ KL  E R M+++L N++ +       T+R E+ K  NT
Sbjct: 747  RELKKTLAKVTNEKEMTRSEINKLELEFRDMKSNLDNVKFQLEKKADLTVRMEEFKKLNT 806

Query: 788  L-RD-VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
              RD ++KA+ ++E L  E         L A+A              Y+D+  + ++   
Sbjct: 807  QQRDAIEKADRDIEGLTPEL--------LQAQAR-------------YDDISQRADK--- 842

Query: 846  EQAEQKINFQQEIEML------LKIASKIKEYYDLRKD----ERFK-ELQEKKSQSESEV 894
                ++ + Q EI  L      L +A+     Y+ R      ER K ELQE     E+E+
Sbjct: 843  ----RERDLQHEIGRLSDNIHQLDLANDDINSYNQRGGPGQLERSKKELQE----IEAEI 894

Query: 895  KSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK 954
               +    EI  E+++    +++ +  +R   DNL YR+    ++    E+E LE     
Sbjct: 895  SKLEADQSEITREINKISTQLKDSENTKRQYSDNLTYRQATRSLNTVVEEVEQLE----- 949

Query: 955  IGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQ------AQYKDI 1008
                   E + G+   E +R   E N      +     +      L Q        YKD 
Sbjct: 950  ---AQNAEVDRGRFKQESERWTREHNSLAAKQASKMGEMKSKDDQLMQLLADWNTDYKDA 1006

Query: 1009 DKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1068
              ++ +  I+++TT+ A +DL RY  ALDKA+M++H +KM EIN I  ELWQ+TYRG D+
Sbjct: 1007 SSKYKECHIKVETTKAAVEDLARYGGALDKAIMQYHGLKMAEINAIAGELWQKTYRGTDV 1066

Query: 1069 DYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
            D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIRLALAE F +N
Sbjct: 1067 DTILIRSDNENAKGNRSYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFGVN 1126

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +     ++
Sbjct: 1127 CGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMKCGDFSD 1186

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             YYRV++++ Q SIIE Q I
Sbjct: 1187 YYYRVSRNERQKSIIERQSI 1206


>gi|358365293|dbj|GAA81915.1| DNA repair protein Rad50 [Aspergillus kawachii IFO 4308]
          Length = 1294

 Score =  362 bits (929), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 362/1227 (29%), Positives = 615/1227 (50%), Gaps = 88/1227 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 115  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 174

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ EAL+ +  +
Sbjct: 175  KYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEALREETHQ 234

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L + ++ +       EL  K  ++ +     + A      E +  Q           E++
Sbjct: 235  LSQEMRRV------AELADKAWKESESYSQVLGALEGKRIEAKSIQTTIDNLKRHLVELD 288

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREK--NDMDTK--IKFLEQNIDAYTAEITNLL 248
            D+DE L++    FE     R+    + E  K  N M+ K  I+   Q +    AE     
Sbjct: 289  DSDEWLQSNLEQFES----RQLQYQQQEEAKKENYMELKEQIEQTRQRLGVKQAEYGKFE 344

Query: 249  SEAGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALN-FINRIRSRLSDLERDLE 306
            ++  A+  R  ER   + K  AR HN+    N    ++A ++ F+ R+R  L D    LE
Sbjct: 345  NDK-ANFERQVERRQRMTKEVARAHNIRGYDN--VEDQADVDEFMRRVRKILKDQNLALE 401

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              KK  +  L+       D       I  QK A  E K    + I   + E  +++ +++
Sbjct: 402  RVKKEAQSELR-------DVQATLNQIGQQKSALQESKNAAKRQIASNDREAATYQGKLN 454

Query: 367  NLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNREK 421
             +N+    +   +  IE +  + +Q  ER     ++  I+   S++  ++ +   LN E 
Sbjct: 455  EINVDEGVQAALESNIEDIGSRLDQAKERARSASWDKEIQNVNSQIRDLEDESSRLNTEL 514

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL---PLDRDLKKEIT 478
                  + D  +L   K EL+  ++  + +   + +++   +        L++D +  I 
Sbjct: 515  IEATKKAGDLARLDHLKKELKERERGLETMKGAHGERLAKFVNANWRPESLEQDYQHVIE 574

Query: 479  QALRALLTEFDDLSSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
            +  R        +S   RE D   +E+  ++ K++ V   LS+ +K++   K  I+   +
Sbjct: 575  EESR-------HVSRAERERDGVSRELEQVEFKMKGVKKTLSQRQKEL---KECIKEIRD 624

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDV-QKSKYNIADGMRQMFDPFERVARAHHVCPCCERP 594
            +++ +    + Y ++L   + + D+ +K     A   + M D  + V  A+ +C  C R 
Sbjct: 625  AVDDEP---EEYPEILKERQAQLDLARKDAEQYAGVSKYMADCLDTVKSAN-MCRLCMRT 680

Query: 595  FSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLR---MVYEEYVKLSKE 651
            F  E E +  K +       A+ +    +E        + L+  R     Y+ + +L + 
Sbjct: 681  FRTENELQTFKNKLEGLVKRAKRV----MEDDEIPRLEEDLNTAREASTAYDTWCRLKQT 736

Query: 652  TIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLW 711
             IP  EK   E T + D+     ++   ++++    K+ VE L + V T  R   EI+  
Sbjct: 737  EIPDLEKEEEEYTAQQDKLLSQLEENDKIVSEKADKKKEVESLSKTVSTIVRYDSEIKSI 796

Query: 712  QKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ 771
            + QV DL           RT+E+IQ E++G       ++  L KL  E+    ++++ ++
Sbjct: 797  RSQVQDLSSKQHDTN-ASRTLEDIQDEIAGIGEKSRAMKKTLSKLTHEKEQTLSEMNKLE 855

Query: 772  IRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP---LSKEKEK 828
            ++   LR+ K    N    +++  + L  + E K   +   + +A+A      L+ E  K
Sbjct: 856  LQ---LRDVKSNLDNVKFKLERKADLLARIEEYKNLNNQQREAIAKADKEIEDLTPELLK 912

Query: 829  LLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASKIKEYYDLRKDERFKE 882
            + + Y+D+  +       +A +K + QQEI  L      L++A++  + Y+ R      E
Sbjct: 913  VQAKYDDISQRA------EAREK-DMQQEISQLYENVHQLELANEEIDAYNERGGPHQLE 965

Query: 883  LQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKF 941
              +++ QS E+E+ + +I    I  E+++    +++ +  +R   DNL YR+    +D  
Sbjct: 966  RSKRELQSIENEISNLEIEQANITKEINKISAQLKDSENTKRQYADNLTYRQATRSLDAV 1025

Query: 942  ASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLK 1001
              EIE L  +  ++   S F+ E  +   E + L ++     G M      + +   D  
Sbjct: 1026 TEEIEQLAAQNAEVDR-SRFKEESERRAREHNALAAKQASKMGEMKGKDDQLMQLLADW- 1083

Query: 1002 QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQ 1061
               YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN II ELWQ+
Sbjct: 1084 NTDYKDAAGKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIISELWQK 1143

Query: 1062 TYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIRLAL
Sbjct: 1144 TYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRLAL 1203

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLI 1180
            AE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +
Sbjct: 1204 AECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHM 1263

Query: 1181 GQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
                 ++ YYRV++++ Q SIIE Q I
Sbjct: 1264 QCGDFSDYYYRVSRNEKQKSIIERQSI 1290


>gi|111380638|gb|ABH09696.1| RAD50-like protein [Talaromyces marneffei]
          Length = 1208

 Score =  362 bits (928), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 361/1249 (28%), Positives = 635/1249 (50%), Gaps = 133/1249 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 31   GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 90

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +   
Sbjct: 91   KYTKAIDNIKALRKKQNEELAKFKIMEQHSKEDKDKADRAEKRSIKLQEEIEALREETHR 150

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ-----KQYAALAE 189
            + + ++   D+ DK        K+       I T+  +R      Q      K++     
Sbjct: 151  ISQEMRNAADLADK------AWKESESYAQVIGTLEGKRIEARSVQSTIDNLKRHLV--- 201

Query: 190  EIEDTDEELKNWKNNFEG--IVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT---AEI 244
            E++++DE L++    FE   +  +++ D  K ER    MD K + +E N D      AE+
Sbjct: 202  EVDESDEWLQSTLEQFESRQLEYQQQEDAQK-ERY---MDIKEQ-IESNRDQLGLKQAEV 256

Query: 245  TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
                ++      ++  R++ I K FAR N     +          F+ R++  + +  + 
Sbjct: 257  GKYENDKDQFERQIGRRENMI-KEFARENNIRGFDDTLDEPKIDEFMRRMQKMVKEHTQA 315

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF--- 361
            LE  +K  +  ++       +  +    I  +K A  E K    + I + + E  S    
Sbjct: 316  LERARKEGQSEVR-------ETQNVLNQIAQRKSAFKEAKNVARRQISDNDKEAASVQSR 368

Query: 362  --ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
              E+ +    ++ ++ ++ +++  +ER  +     +++ +++   +EL +++ +   LN+
Sbjct: 369  LNEIDVDEGTVAVLESQKEEVQSRLERLKDVARGAKWDKDLQDANTELRSLENESTKLNQ 428

Query: 420  EKDVLAGD--SEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
            E  ++AG   + D  +LA  K EL++ +++ + +   + D++  ++  +   D +L++E 
Sbjct: 429  E--LIAGTKKAGDLARLAHMKKELKDRERQLETMSGAHGDRLSQLVSAQWSPD-NLEREY 485

Query: 478  TQALRALLTEFDDLSSKSREA-DKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
             Q + A +     L+ ++R+   +E++ ++ K+++    L K +K+ D   + I   ++ 
Sbjct: 486  -QNVVADVANSMTLAERNRDGIGRELDQVEFKLKDCRATLEKRKKERDQCLKKIRDAIDD 544

Query: 537  LNQQIFSI-DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
               +   I  T Q  +D  +  +DV++       GM   F+          +C  C RPF
Sbjct: 545  DPTEYLDILQTRQNHMDQTR--KDVEQFA-----GMHGYFNMCLDALDQKKMCRTCMRPF 597

Query: 596  SAEEEDEFVKKQ-----RVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVK 647
              E E    K +     +   +SS E +K    +  NA          RMV   Y+ +++
Sbjct: 598  KNETEMRTFKNRLEGLIKKNFSSSDEDLKQAEEDYENA----------RMVNTDYDTWLR 647

Query: 648  LSKETIPVAEKNLHELT---EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
            L++  IP  EKN  +     EE+ +K ++ D  +   A+    K  +E L + V +  R+
Sbjct: 648  LTETAIPELEKNEEQFQGQKEEILKKLESHDTTVDERAE---KKREIESLSRTVTSIVRI 704

Query: 705  FQEIQLWQKQVDDLEYMLDSRGQG--VRTMEEIQ--------------LELSGSLSTKDN 748
              EI+  + Q+ ++   L  + QG   R +E+IQ              L +S   S KD 
Sbjct: 705  DGEIKSLRSQIAEV---LSEQPQGDFSRVLEDIQNDIAAIGEKSRAIKLTISKLSSEKDQ 761

Query: 749  LQNELEK----LRDEQRYMENDLSNIQIRWHTL-REEKVKAANTLR--DVKKAEEELEHL 801
             +++L K    LRD Q  + N    ++ +   L R E+ K +N  +   ++KA+ +++ L
Sbjct: 762  SRDDLNKAELALRDVQGSLANASHELEKKTGLLARVEEYKKSNAKQRESIEKADRDIDQL 821

Query: 802  MEE--KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIE 859
              E  K Q  LD+  ++  +    +E ++ L+  +D   +LN   +E             
Sbjct: 822  EPEIAKAQAKLDD--ISRRAEAKERELQQALTRLSDRVNQLNLANDE------------- 866

Query: 860  MLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQD 919
                    IK Y D    E+  + +++    + E+K  + +  E   E+++    +++ D
Sbjct: 867  --------IKSYIDRGGPEQLNKSRKELENIQQEIKKLEEQQSETTREINKISAQLKDSD 918

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
              RR   DN++YR++   +++   EI+ LEE+  +I   S F+ E  +   + + L ++ 
Sbjct: 919  NTRRQYSDNISYRQSCRLLEEVQREIQQLEEQNAEIDR-SRFKEESERWTRKHNALAAQQ 977

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
                G M      + +   D     YKD    + +  I+++TT+ A  DL RY  ALDKA
Sbjct: 978  ASKMGEMKSKDDQLLQLLADWN-TDYKDAAANYKEAHIKVETTKAAVDDLGRYGGALDKA 1036

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            +M++H++KMEEIN+I+ ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE+
Sbjct: 1037 IMKYHSLKMEEINRIVEELWQRTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEM 1096

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQ+VLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ 
Sbjct: 1097 DMRGRCSAGQRVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKT 1156

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            R+ Q NFQLIVITHDE F   +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1157 RQQQANFQLIVITHDEEFLHHMQCADFSDYYYRVSRNERQKSIIEKQSI 1205


>gi|212542011|ref|XP_002151160.1| DNA repair protein Rad50 [Talaromyces marneffei ATCC 18224]
 gi|210066067|gb|EEA20160.1| DNA repair protein Rad50 [Talaromyces marneffei ATCC 18224]
          Length = 1329

 Score =  361 bits (926), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 361/1249 (28%), Positives = 635/1249 (50%), Gaps = 133/1249 (10%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 151  GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 210

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +   
Sbjct: 211  KYTKAIDNIKALRKKQNEELAKFKIMEQHSKEDKDKADRAEKRSIKLQEEIEALREETHR 270

Query: 138  LEKSIQ---DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ-----KQYAALAE 189
            + + ++   D+ DK        K+       I T+  +R      Q      K++     
Sbjct: 271  ISQEMRNAADLADK------AWKESESYAQVIGTLEGKRIEARSVQSTIDNLKRHLV--- 321

Query: 190  EIEDTDEELKNWKNNFEG--IVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT---AEI 244
            E++++DE L++    FE   +  +++ D  K ER    MD K + +E N D      AE+
Sbjct: 322  EVDESDEWLQSTLEQFESRQLEYQQQEDAQK-ERY---MDIKEQ-IESNRDQLGLKQAEV 376

Query: 245  TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
                ++      ++  R++ I K FAR N     +          F+ R++  + +  + 
Sbjct: 377  GKYENDKDQFERQIGRRENMI-KEFARENNIRGFDDTLDEPKIDEFMRRMQKMVKEHTQA 435

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF--- 361
            LE  +K  +  ++       +  +    I  +K A  E K    + I + + E  S    
Sbjct: 436  LERARKEGQSEVR-------ETQNVLNQIAQRKSAFKEAKNVARRQISDNDKEAASVQSR 488

Query: 362  --ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
              E+ +    ++ ++ ++ +++  +ER  +     +++ +++   +EL +++ +   LN+
Sbjct: 489  LNEIDVDEGTVAVLESQKEEVQSRLERLKDVARGAKWDKDLQDANTELRSLEDESTKLNQ 548

Query: 420  EKDVLAGD--SEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
            E  ++AG   + D  +LA  K EL++ +++ + +   + D++  ++  +   D +L++E 
Sbjct: 549  E--LIAGTKKAGDLARLAHMKKELKDRERQLETMSGAHGDRLSQLVSAQWSPD-NLEREY 605

Query: 478  TQALRALLTEFDDLSSKSREA-DKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
             Q + A +     L+ ++R+   +E++ ++ K+++    L K +K+ D   + I   ++ 
Sbjct: 606  -QNVVADVANSMTLAERNRDGIGRELDQVEFKLKDCRATLEKRKKERDQCLKKIRDAIDD 664

Query: 537  LNQQIFSI-DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
               +   I  T Q  +D  +  +DV++       GM   F+          +C  C RPF
Sbjct: 665  DPTEYLDILQTRQNHMDQTR--KDVEQFA-----GMHGYFNMCLDALDQKKMCRTCMRPF 717

Query: 596  SAEEEDEFVKKQ-----RVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVK 647
              E E    K +     +   +SS E +K    +  NA          RMV   Y+ +++
Sbjct: 718  KNETEMRTFKNRLEGLIKKNFSSSDEDLKQAEEDYENA----------RMVNTDYDTWLR 767

Query: 648  LSKETIPVAEKNLHELT---EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
            L++  IP  EKN  +     EE+ +K ++ D  +   A+    K  +E L + V +  R+
Sbjct: 768  LTETAIPELEKNEEQFQGQKEEILKKLESHDTTVDERAE---KKREIESLSRTVTSIVRI 824

Query: 705  FQEIQLWQKQVDDLEYMLDSRGQG--VRTMEEIQ--------------LELSGSLSTKDN 748
              EI+  + Q+ ++   L  + QG   R +E+IQ              L +S   S KD 
Sbjct: 825  DGEIKSLRSQIAEV---LSEQPQGDFSRVLEDIQNDIAAIGEKSRAIKLTISKLSSEKDQ 881

Query: 749  LQNELEK----LRDEQRYMENDLSNIQIRWHTL-REEKVKAANTLR--DVKKAEEELEHL 801
             +++L K    LRD Q  + N    ++ +   L R E+ K +N  +   ++KA+ +++ L
Sbjct: 882  SRDDLNKAELALRDVQGSLANASHELEKKTGLLARVEEYKKSNAKQRESIEKADRDIDQL 941

Query: 802  MEE--KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIE 859
              E  K Q  LD+  ++  +    +E ++ L+  +D   +LN   +E             
Sbjct: 942  EPEIAKAQAKLDD--ISRRAEAKERELQQALTRLSDRVNQLNLANDE------------- 986

Query: 860  MLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQD 919
                    IK Y D    E+  + +++    + E+K  + +  E   E+++    +++ D
Sbjct: 987  --------IKSYIDRGGPEQLNKSRKELENIQQEIKKLEEQQSETTREINKISAQLKDSD 1038

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
              RR   DN++YR++   +++   EI+ LEE+  +I   S F+ E  +   + + L ++ 
Sbjct: 1039 NTRRQYSDNISYRQSCRLLEEVQREIQQLEEQNAEIDR-SRFKEESERWTRKHNALAAQQ 1097

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
                G M      + +   D     YKD    + +  I+++TT+ A  DL RY  ALDKA
Sbjct: 1098 ASKMGEMKSKDDQLLQLLADW-NTDYKDAAANYKEAHIKVETTKAAVDDLGRYGGALDKA 1156

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            +M++H++KMEEIN+I+ ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE+
Sbjct: 1157 IMKYHSLKMEEINRIVEELWQRTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEM 1216

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQ+VLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ 
Sbjct: 1217 DMRGRCSAGQRVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKT 1276

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            R+ Q NFQLIVITHDE F   +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1277 RQQQANFQLIVITHDEEFLHHMQCADFSDYYYRVSRNERQKSIIEKQSI 1325


>gi|134055356|emb|CAK43910.1| unnamed protein product [Aspergillus niger]
          Length = 1294

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 358/1232 (29%), Positives = 613/1232 (49%), Gaps = 98/1232 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 115  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 174

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ EAL+ +  +
Sbjct: 175  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEALREETHQ 234

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L + ++ +       EL  K  ++ +     + A      E +  Q           E++
Sbjct: 235  LSQEMRRV------AELADKAWKESESYSQVLGALEGKRIEAKSIQTTIDNLKRHLVELD 288

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREK--NDMDTK--IKFLEQNIDAYTAEITNLL 248
            D+DE L++    FE     R+    + E  K  N M+ K  I+   Q +    AE     
Sbjct: 289  DSDEWLQSNLEQFES----RQLQYQQQEEAKKENYMELKEQIEQTRQRLGVKQAEYGKFE 344

Query: 249  SEAGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALN-FINRIRSRLSDLERDLE 306
            ++  A+  R  ER   + K  AR HN+    N    ++A ++ F+ R+R  L D  + LE
Sbjct: 345  NDK-ANFERQVERRQRMTKEVARAHNIRGFDN--VEDQADVDEFMRRVRKILKDQNQVLE 401

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              KK  +  L+       D       I  QK A  E K    + I   + E  +++ +++
Sbjct: 402  RVKKEAQSELR-------DVQATLNQIGQQKSALQESKNAAKRQIASNDREAATYQGKLN 454

Query: 367  NLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNREK 421
             +N+    +   +  IE +  + +Q  +R     ++  I+   S++  ++ +   LN E 
Sbjct: 455  EINVDEGVQAALESNIEDIGSRLDQAKQRARSASWDKEIQNVNSQIRDLEDESSRLNSEL 514

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP---LDRDLKKEIT 478
                  + D  +L   K EL+  ++  + +   + +++   +        L++D +  I 
Sbjct: 515  IEATKKAGDLARLDHLKKELKERERSLETMKGAHGERLMKFVNANWSPESLEQDYQHVIE 574

Query: 479  QALRALLTEFDDLSSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
            +  R        +S   RE D   +E+  ++ K++ V   LS+ +K++   K  I+   +
Sbjct: 575  EESR-------HVSRAERERDGVSRELEQVEFKMKGVRKTLSQRQKEL---KECIKEIRD 624

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDV-QKSKYNIADGMRQMFDPFERVARAHHVCPCCERP 594
            +++ +    + Y ++L   + + D+ +K     A   + M D  E V  A+ +C  C R 
Sbjct: 625  AVDDEP---EEYPEILKERQAQLDLARKDAEQYAGVSKYMADCLETVKSAN-MCRLCMRT 680

Query: 595  FSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLR---MVYEEYVKLSKE 651
            F  E E +  + +       A+ +    +E  +     + L+  R     Y+ + +L + 
Sbjct: 681  FRTENELQTFRNKLEGLVKRAKRV----MEDDDIPRLEEDLNTAREASTAYDAWCRLKQT 736

Query: 652  TIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLW 711
             IP  EK   E   + D+     ++   ++++    K+ VE L + V T  R   EI+  
Sbjct: 737  EIPDLEKEEEEYIAQQDKLLSQLEENDKIVSEKADKKKDVESLSKTVNTIVRYDSEIKAI 796

Query: 712  QKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ 771
            + QV +L           RT+E+IQ E++G       L+  L KL  E+    ++++ ++
Sbjct: 797  RSQVQELSTKQQDTN-ASRTLEDIQDEIAGIGEKSRALKKTLSKLTHEKEQTLSEMNKLE 855

Query: 772  IRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL--------DLDEKLLAEASGPLS 823
            ++              LRDVK   + ++  +E K  L        +L+ +   EA     
Sbjct: 856  LQ--------------LRDVKSNLDNVKFKLERKADLLARIEEYKNLNNQQ-REAIAKAD 900

Query: 824  KEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASKIKEYYDLRKD 877
            KE E L  +   ++ K +   +    ++ + QQEI  L      L++A++  + Y+ R  
Sbjct: 901  KEIEDLTPELLKVQAKYDDISQRAEARERDMQQEISHLYENIHQLELANEEIDAYNERGG 960

Query: 878  ERFKELQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKA 936
                E  +++ QS E+E+ + ++    I  ++++    +++ +  +R   DNL YR+   
Sbjct: 961  PHQLERSKRELQSIENEISNLEVEQANITKDINKISAQLKDSENTKRQYADNLTYRQATR 1020

Query: 937  KVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRN 996
             +D+   EIE L  +  ++   S F+ E  +   E + L ++     G M      + + 
Sbjct: 1021 SLDEVTEEIEQLAAQNAEVDR-SRFKEESERRAREHNALAAKQASKMGEMKSKDDQLMQL 1079

Query: 997  KIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIR 1056
              D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN II 
Sbjct: 1080 LADW-NTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIIS 1138

Query: 1057 ELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLI 1115
            ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+I
Sbjct: 1139 ELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASII 1198

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE 
Sbjct: 1199 IRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEE 1258

Query: 1176 FAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1259 FLRHMQCGDFSDYYYRVSRNEKQKSIIERQSI 1290


>gi|317026241|ref|XP_001389243.2| DNA repair protein Rad50 [Aspergillus niger CBS 513.88]
          Length = 1342

 Score =  359 bits (921), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 358/1232 (29%), Positives = 613/1232 (49%), Gaps = 98/1232 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 150  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 209

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ EAL+ +  +
Sbjct: 210  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEALREETHQ 269

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L + ++ +       EL  K  ++ +     + A      E +  Q           E++
Sbjct: 270  LSQEMRRV------AELADKAWKESESYSQVLGALEGKRIEAKSIQTTIDNLKRHLVELD 323

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREK--NDMDTK--IKFLEQNIDAYTAEITNLL 248
            D+DE L++    FE     R+    + E  K  N M+ K  I+   Q +    AE     
Sbjct: 324  DSDEWLQSNLEQFES----RQLQYQQQEEAKKENYMELKEQIEQTRQRLGVKQAEYGKFE 379

Query: 249  SEAGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALN-FINRIRSRLSDLERDLE 306
            ++  A+  R  ER   + K  AR HN+    N    ++A ++ F+ R+R  L D  + LE
Sbjct: 380  NDK-ANFERQVERRQRMTKEVARAHNIRGFDN--VEDQADVDEFMRRVRKILKDQNQVLE 436

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
              KK  +  L+       D       I  QK A  E K    + I   + E  +++ +++
Sbjct: 437  RVKKEAQSELR-------DVQATLNQIGQQKSALQESKNAAKRQIASNDREAATYQGKLN 489

Query: 367  NLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNREK 421
             +N+    +   +  IE +  + +Q  +R     ++  I+   S++  ++ +   LN E 
Sbjct: 490  EINVDEGVQAALESNIEDIGSRLDQAKQRARSASWDKEIQNVNSQIRDLEDESSRLNSEL 549

Query: 422  DVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP---LDRDLKKEIT 478
                  + D  +L   K EL+  ++  + +   + +++   +        L++D +  I 
Sbjct: 550  IEATKKAGDLARLDHLKKELKERERSLETMKGAHGERLMKFVNANWSPESLEQDYQHVIE 609

Query: 479  QALRALLTEFDDLSSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
            +  R        +S   RE D   +E+  ++ K++ V   LS+ +K++   K  I+   +
Sbjct: 610  EESR-------HVSRAERERDGVSRELEQVEFKMKGVRKTLSQRQKEL---KECIKEIRD 659

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDV-QKSKYNIADGMRQMFDPFERVARAHHVCPCCERP 594
            +++ +    + Y ++L   + + D+ +K     A   + M D  E V  A+ +C  C R 
Sbjct: 660  AVDDEP---EEYPEILKERQAQLDLARKDAEQYAGVSKYMADCLETVKSAN-MCRLCMRT 715

Query: 595  FSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLR---MVYEEYVKLSKE 651
            F  E E +  + +       A+ +    +E  +     + L+  R     Y+ + +L + 
Sbjct: 716  FRTENELQTFRNKLEGLVKRAKRV----MEDDDIPRLEEDLNTAREASTAYDAWCRLKQT 771

Query: 652  TIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLW 711
             IP  EK   E   + D+     ++   ++++    K+ VE L + V T  R   EI+  
Sbjct: 772  EIPDLEKEEEEYIAQQDKLLSQLEENDKIVSEKADKKKDVESLSKTVNTIVRYDSEIKAI 831

Query: 712  QKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ 771
            + QV +L           RT+E+IQ E++G       L+  L KL  E+    ++++ ++
Sbjct: 832  RSQVQELSTKQQDTN-ASRTLEDIQDEIAGIGEKSRALKKTLSKLTHEKEQTLSEMNKLE 890

Query: 772  IRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL--------DLDEKLLAEASGPLS 823
            ++              LRDVK   + ++  +E K  L        +L+ +   EA     
Sbjct: 891  LQ--------------LRDVKSNLDNVKFKLERKADLLARIEEYKNLNNQQ-REAIAKAD 935

Query: 824  KEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEML------LKIASKIKEYYDLRKD 877
            KE E L  +   ++ K +   +    ++ + QQEI  L      L++A++  + Y+ R  
Sbjct: 936  KEIEDLTPELLKVQAKYDDISQRAEARERDMQQEISHLYENIHQLELANEEIDAYNERGG 995

Query: 878  ERFKELQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKA 936
                E  +++ QS E+E+ + ++    I  ++++    +++ +  +R   DNL YR+   
Sbjct: 996  PHQLERSKRELQSIENEISNLEVEQANITKDINKISAQLKDSENTKRQYADNLTYRQATR 1055

Query: 937  KVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRN 996
             +D+   EIE L  +  ++   S F+ E  +   E + L ++     G M      + + 
Sbjct: 1056 SLDEVTEEIEQLAAQNAEVDR-SRFKEESERRAREHNALAAKQASKMGEMKSKDDQLMQL 1114

Query: 997  KIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIR 1056
              D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN II 
Sbjct: 1115 LADW-NTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIIS 1173

Query: 1057 ELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLI 1115
            ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+I
Sbjct: 1174 ELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASII 1233

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE 
Sbjct: 1234 IRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEE 1293

Query: 1176 FAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1294 FLRHMQCGDFSDYYYRVSRNEKQKSIIERQSI 1325


>gi|389631835|ref|XP_003713570.1| DNA repair protein RAD50 [Magnaporthe oryzae 70-15]
 gi|351645903|gb|EHA53763.1| DNA repair protein RAD50 [Magnaporthe oryzae 70-15]
          Length = 1316

 Score =  358 bits (920), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 341/1263 (26%), Positives = 624/1263 (49%), Gaps = 114/1263 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +  K I+  L+      GE V LS + A++D  VP  MGV  AILENVIF HQD++ WPL
Sbjct: 107  LNVKTIDGTLRV--ETNGEHVSLSKKNAELDEMVPEKMGVPAAILENVIFCHQDDSLWPL 164

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFD++F A +YTKA++ +K L K   ++++ +K               L E+
Sbjct: 165  SEPSVLKKKFDELFEAIKYTKAIDNLKLLRKKHGEQLRIFK--------------NLEET 210

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQ----------ISTMT 170
              QD+EK E     ++ LE  I +++ K   T   +   RK +            I T  
Sbjct: 211  SKQDKEKGERYGKAIKVLEAEIAELEKKYKTTLDKMDKYRKEEATKRQEANSFFGIVTDL 270

Query: 171  ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
              +  L+E++++    +A+E+ +T E + + +   E  +++    + +++ +      K 
Sbjct: 271  QNKKVLYEERKQ----MADELLETIERMSDSEEELEAALSQYADKVKQMKDDATGKTAKY 326

Query: 231  KFLEQNIDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFS 283
              L+ ++ A    + + L++ G H++       +++ R S +++   +H +    +   +
Sbjct: 327  TELKGDLGALRKSLQDKLADRGKHVADKEHHDRQVSARLSMVKEAAQQHGIRGF-DGDLT 385

Query: 284  NEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI 343
                 +F NR++  L + +R++    +  E        +  D   R +++   + +  + 
Sbjct: 386  EAQVKSFENRVQKLLDEKKREVAVYDQELEKLKTSHGKAVADLTARRESLNRARDSAQKR 445

Query: 344  KAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQK 403
             + I   ++ K  +R   +L + +   + +D    ++  E+    N L + E +  I + 
Sbjct: 446  ISDI--DLRLKGLQRSVGDLHVDDGAKAVLDSNSTQLETELREAYNALQQSELDDEINEA 503

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
               L  +  +   LN E       + +R +L L++ E EN     K ++  + DK+  + 
Sbjct: 504  NDNLGRLQGEASRLNNELVQCTHLASERAQLDLRRKEAENQNVYLKSVMATWGDKLAALA 563

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSR---EADKEVNMLQMKIQEVTDNLSKHR 520
             G  P++ +   ++ Q +  L  +   +S+K     EA +E+  L  K+    + ++K  
Sbjct: 564  GG--PVEPETIGKVYQQI--LDQQSAAVSAKKSLVDEAQQEIRQLDYKVSSAREEVTKTT 619

Query: 521  KDVD-SKKRFIESKLESLNQQ--IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            KD + ++K   ++ ++S ++   +  + TY   L S +E   V ++  ++ D + + ++ 
Sbjct: 620  KDTERAEKAVCDALMQSKDEDDDVHPVHTYLDRLASLQESLSVAETDLHLFDALAEYYEK 679

Query: 578  FERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD--SYFQQL 635
             ++     + C  CER F   + D+F K + V+     +++     E  NAD     +Q+
Sbjct: 680  AKKKMERDNKCTLCERSFG--DSDKFFKSKLVQKI--VKNLDQTQKEVVNADIQRLRKQV 735

Query: 636  DKLRMV---YEEYVKLSKETIPVAEK--NLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
            D LR V   Y+ Y +   +  P+ EK  +L    E + +K +  D  +  L   + D ES
Sbjct: 736  DILRAVRTNYDTYQRTKAQLPPLEEKLQDLESEKEAMIRKQETLDKEMSALEDKRLDTES 795

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ-LELSGSLSTKDNL 749
            +   V+ +  A     +I   +KQ++ L     S G  +R+  EIQ  ++  S  T+  L
Sbjct: 796  MGKAVRSITDA---VAKIADSEKQIERLASQQSSSG-NIRSAHEIQEAQVKNSEQTR-AL 850

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLR------EEKVKAANTL-RDVKKAEEELEHLM 802
              +L KL  +++  ++ +S +++    L+       +KV+  N L + ++  + E + + 
Sbjct: 851  SLQLNKLVADRQRKKDLISQLELNKSELQRKLSEFNQKVERKNDLIKQIESLKTERDQMQ 910

Query: 803  EEKGQL-----DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQE 857
            E K +      DL++ L    S               D +V   RE  ++A ++ N   E
Sbjct: 911  ETKDEGAKELEDLEQNLFKAES-------------IRDEEVGRAREKLQKATEQKNLVAE 957

Query: 858  -IEMLLKIASKIKEYYD-------LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELD 909
             +  L  ++S I++Y D          D   K L++   + ES++        ++  E++
Sbjct: 958  TVGKLKSLSSDIQDYLDRGGPGLAAANDRTIKNLEQSLERMESDIT-------KLTAEIN 1010

Query: 910  RFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
              +    N D+ ++NI+DNL Y  T   VDK   EIE+LE+R  +       + E     
Sbjct: 1011 NLRQEADNSDRKKKNIQDNLAYNRTLRIVDKLEKEIEALEDRNAQ-EDWERLDGEANMLK 1069

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
            ++ D L  + +  +GT+   +   + +++   Q  Y D   +  +  I+++TT+ A +D+
Sbjct: 1070 MKFDDLSGKSHVLKGTLETKKAEQA-SRVAEYQQDYSDARLKFREAHIKVETTKAAIEDM 1128

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-----RS 1084
              Y  AL+KA+M +H++KMEE+N+I  ELW+ TY+G DID I I S+ E + T     R+
Sbjct: 1129 GSYSAALEKAIMSYHSLKMEEVNRIADELWRSTYQGTDIDTILIRSEVETSATASTTRRT 1188

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y++ M   D E++MRGRCSAGQKVLAS+IIRLALAE+F ++CG++ALDEPTTNLD  N
Sbjct: 1189 YNYRLCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLIALDEPTTNLDEAN 1248

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
              SLA +LH I++ R+ Q NFQLIVITHDE F + +      + +YRV +D+ Q S I  
Sbjct: 1249 IRSLAVSLHNIIQARQAQSNFQLIVITHDEAFLRAMQCSDFCDTFYRVRRDEMQRSTISR 1308

Query: 1205 QEI 1207
            + I
Sbjct: 1309 ENI 1311


>gi|440467842|gb|ELQ37036.1| DNA repair protein RAD50 [Magnaporthe oryzae Y34]
 gi|440478587|gb|ELQ59406.1| DNA repair protein RAD50 [Magnaporthe oryzae P131]
          Length = 1316

 Score =  358 bits (920), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 341/1263 (26%), Positives = 624/1263 (49%), Gaps = 114/1263 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +  K I+  L+      GE V LS + A++D  VP  MGV  AILENVIF HQD++ WPL
Sbjct: 107  LNVKTIDGTLRV--ETNGEHVSLSKKNAELDEMVPEKMGVPAAILENVIFCHQDDSLWPL 164

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFD++F A +YTKA++ +K L K   ++++ +K               L E+
Sbjct: 165  SEPSVLKKKFDELFEAIKYTKAIDNLKLLRKKHGEQLRIFK--------------NLEET 210

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQ----------ISTMT 170
              QD+EK E     ++ LE  I +++ K   T   +   RK +            I T  
Sbjct: 211  SKQDKEKGERYGKAIKVLEAEIAELEKKYKTTLDKMDKYRKEEATKRQEANSFFGIVTDL 270

Query: 171  ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
              +  L+E++++    +A+E+ +T E + + +   E  +++    + +++ +      K 
Sbjct: 271  QNKKVLYEERKQ----MADELLETIERMSDSEEELEAALSQYADKVKQMKDDATGKTAKY 326

Query: 231  KFLEQNIDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFS 283
              L+ ++ A    + + L++ G H++       +++ R S +++   +H +    +   +
Sbjct: 327  TELKGDLGALRKSLQDKLADRGKHVADKEHHDRQVSARLSMVKEAAQQHGIRGF-DGDLT 385

Query: 284  NEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI 343
                 +F NR++  L + +R++    +  E        +  D   R +++   + +  + 
Sbjct: 386  EAQVKSFENRVQKLLDEKKREVAVYDQELEKLKTSHGKAVADLTARRESLNRARDSAQKR 445

Query: 344  KAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQK 403
             + I   ++ K  +R   +L + +   + +D    ++  E+    N L + E +  I + 
Sbjct: 446  ISDI--DLRLKGLQRSVGDLHVDDGAKAVLDSNSTQLETELREAYNALQQSELDDEINEA 503

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
               L  +  +   LN E       + +R +L L++ E EN     K ++  + DK+  + 
Sbjct: 504  NDNLGRLQGEASRLNNELVQCTHLASERAQLDLRRKEAENQNVYLKSVMATWGDKLAALA 563

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSR---EADKEVNMLQMKIQEVTDNLSKHR 520
             G  P++ +   ++ Q +  L  +   +S+K     EA +E+  L  K+    + ++K  
Sbjct: 564  GG--PVEPETIGKVYQQI--LDQQSAAVSAKKSLVDEAQQEIRQLDYKVSSAREEVTKTT 619

Query: 521  KDVD-SKKRFIESKLESLNQQ--IFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            KD + ++K   ++ ++S ++   +  + TY   L S +E   V ++  ++ D + + ++ 
Sbjct: 620  KDTERAEKAVCDALMQSKDEDDDVHPVHTYLDRLASLQESLSVAETDLHLFDALAEYYEK 679

Query: 578  FERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD--SYFQQL 635
             ++     + C  CER F   + D+F K + V+     +++     E  NAD     +Q+
Sbjct: 680  AKKKMERDNKCTLCERSFG--DSDKFFKSKLVQKI--VKNLDQTQKEVVNADIQRLRKQV 735

Query: 636  DKLRMV---YEEYVKLSKETIPVAEK--NLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
            D LR V   Y+ Y +   +  P+ EK  +L    E + +K +  D  +  L   + D ES
Sbjct: 736  DILRAVRTNYDTYQRTKAQLPPLEEKLQDLESEKEAMIRKQETLDKEMSALEDKRLDTES 795

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ-LELSGSLSTKDNL 749
            +   V+ +  A     +I   +KQ++ L     S G  +R+  EIQ  ++  S  T+  L
Sbjct: 796  MGKAVRSITDA---VAKIADSEKQIERLASQQSSSG-NIRSAHEIQEAQVKNSEQTR-AL 850

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLR------EEKVKAANTL-RDVKKAEEELEHLM 802
              +L KL  +++  ++ +S +++    L+       +KV+  N L + ++  + E + + 
Sbjct: 851  SLQLNKLVADRQRKKDLISQLELNKSELQRKLSEFNQKVERKNDLIKQIESLKTERDQMQ 910

Query: 803  EEKGQL-----DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQE 857
            E K +      DL++ L    S               D +V   RE  ++A ++ N   E
Sbjct: 911  ETKDEGAKELEDLEQNLFKAES-------------IRDEEVGRAREKLQKATEQKNLVAE 957

Query: 858  -IEMLLKIASKIKEYYD-------LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELD 909
             +  L  ++S I++Y D          D   K L++   + ES++        ++  E++
Sbjct: 958  TVGKLKSLSSDIQDYLDRGGPGLAAANDRTIKNLEQSLERMESDIT-------KLTAEIN 1010

Query: 910  RFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
              +    N D+ ++NI+DNL Y  T   VDK   EIE+LE+R  +       + E     
Sbjct: 1011 NLRQEADNSDRKKKNIQDNLAYNRTLRIVDKLEKEIEALEDRNAQ-EDWERLDGEANMLK 1069

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
            ++ D L  + +  +GT+   +   + +++   Q  Y D   +  +  I+++TT+ A +D+
Sbjct: 1070 MKFDDLSGKSHVLKGTLETKKAEQA-SRVAEYQQDYSDARLKFREAHIKVETTKAAIEDM 1128

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-----RS 1084
              Y  AL+KA+M +H++KMEE+N+I  ELW+ TY+G DID I I S+ E + T     R+
Sbjct: 1129 GSYSAALEKAIMSYHSLKMEEVNRIADELWRSTYQGTDIDTILIRSEVETSATASTTRRT 1188

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y++ M   D E++MRGRCSAGQKVLAS+IIRLALAE+F ++CG++ALDEPTTNLD  N
Sbjct: 1189 YNYRLCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLIALDEPTTNLDEAN 1248

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
              SLA +LH I++ R+ Q NFQLIVITHDE F + +      + +YRV +D+ Q S I  
Sbjct: 1249 IRSLAVSLHNIIQARQAQSNFQLIVITHDEAFLRAMQCSDFCDTFYRVRRDEMQRSTISR 1308

Query: 1205 QEI 1207
            + I
Sbjct: 1309 ENI 1311


>gi|448521108|ref|XP_003868427.1| Rad50 DNA double-strand break repair factor [Candida orthopsilosis Co
            90-125]
 gi|380352767|emb|CCG25523.1| Rad50 DNA double-strand break repair factor [Candida orthopsilosis]
          Length = 1302

 Score =  358 bits (920), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 361/1265 (28%), Positives = 627/1265 (49%), Gaps = 146/1265 (11%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K++E  L  I    G+K  +S + A++D +VP  +G S AIL+NVIF HQDE+ WPL
Sbjct: 113  ITFKSMEGQLAYI--ENGKKTSISSKNAELDSQVPIFLGASTAILDNVIFCHQDESLWPL 170

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             + S LKKKFDDIF A+++TK ++ +K + KD A +IK  +  + +L+  KD A K+R+ 
Sbjct: 171  SEASVLKKKFDDIFEASKFTKVIDNLKSIKKDMATDIKLIEQSVNHLKIDKDRAKKVRDR 230

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +++     +    ++ EL   I+  D +      T ++ +K       +  ++++L E  
Sbjct: 231  LAEMNHSVDTFAAEISELNIQIEQKDLEAEKLFATNQEFQKTLSDYENLLMKKASLDETI 290

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             +  +++ E + D+DEEL + + NF  IVA+ +  I KL++ ++ ++T ++         
Sbjct: 291  DRIKSSI-EILPDSDEELFHKQENFAAIVAENKESIGKLQKVEDGLNTSLR-------EK 342

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLF---------ARHNLGSLPNAPFSNEAALNFI 291
            T E   ++   G+  ++  E D+   KL           + NLG   +   +N     F 
Sbjct: 343  TEEYNEMIRLDGSLKAKRAEYDANKGKLTKLMNENAKEIKINLGDDESRNLTN-----FK 397

Query: 292  NRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHI 351
            N I ++L DL++  E+K+              L +N R   +E+QKQ K +I+  I+K  
Sbjct: 398  NAITAKLVDLQK--EEKE--------------LISNYRSIEVESQKQLK-KIEDEIIKDE 440

Query: 352  KEKEN-ERD---------SFE--LQISNLNLSHIDERENKMRI---EVERKTNQLAEREF 396
            +  E  ERD         SF+  L  S+ + S +  R++++ +   E++ K ++   +E 
Sbjct: 441  QSMEYIERDLQKSQQSLSSFKKRLDASSNDESELVSRKDELDVTIKELDNKKSKKEVKEL 500

Query: 397  EINIRQKQSEL----FAMDQKIKALNREKDVLAGDSEDRVK-----LALKKAELENHKKK 447
            +I I +  +E     F +D+  K L+   +    +   R+K     + LK AE+    K 
Sbjct: 501  DIKITKANAENAKLEFELDEVAKKLSTSSE--QSELRTRIKFLEDEIKLKNAEI---TKI 555

Query: 448  HKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQM 507
             +KI +EYK+    V+ G L +D   +    +    L +E D    K      E++ L  
Sbjct: 556  SQKINNEYKE----VVGGDLDIDF-AEPNFKEKYEELKSELDSQQKKVYGIQSEIDSLMS 610

Query: 508  KIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVL-DSAKEKRDVQKSKYN 566
                + +N+S +   +D  K  I   +     Q   ID Y+ +L D  ++ R+V +   N
Sbjct: 611  SRSGILNNISNNSLKIDELKTDITEVI-----QESEIDEYENILRDLEEDYRNVTED-VN 664

Query: 567  IADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESS 626
             ++  +        +A  +  C  C+R F      +F+ + R       +  K+  ++  
Sbjct: 665  TSEVTKSYGKSALEMAEKNKCCLLCKRMFDDPALTKFIAELR----QGFDEEKIRKVKR- 719

Query: 627  NADSYFQQLDKLRMV------YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGV 680
            NA+   ++LD  + +      Y E V L     P  EK L    ++++  + +       
Sbjct: 720  NAEEIGKELDATKSISLKVINYRECVALK----PKLEKELSIFDDKINTLNNSLKSETKT 775

Query: 681  LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELS 740
               ++   ES   L +P++ A RL  E+Q    +VD L   LD  G  V ++EE+Q +  
Sbjct: 776  FESLRHTFESANDLKKPLDDASRLNHEVQDLDFKVDKLNDELDEFGSAVGSVEELQKQQR 835

Query: 741  GSLSTKDNLQNELEKLRDEQ-------RYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
                    ++ E+  L DE+       + +EN++ + ++    L     + +N  R ++ 
Sbjct: 836  AIHVKIREVRQEVSDLSDEKYKVQKDIQRLENNVKDTKLTISNLERSLAEVSNIKRSIED 895

Query: 794  AEEELEHLMEEKGQLDLDEKLLAEASGP--LSKEKEKLLSDYNDLKVKLNREYEEQAEQK 851
            +E  +  L  E    ++  KLL         S E E++  D++    K+++  +      
Sbjct: 896  SETSIASL--ESKSKEMRSKLLHSRKDRDRASHELEQVQIDHSLAGNKMSKRIKSLNTLV 953

Query: 852  INFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEIL---VEL 908
             +FQ     LL   S   E  +L K      +++     E+ VK C     +IL    E+
Sbjct: 954  ESFQ----TLLTAMSDF-EAIELPK------MKKNSDNMEAIVKECDSIKAQILENSSEI 1002

Query: 909  DRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKH 968
             +++ +V +  ++  NI  N++YR          ++I  L+E   ++  +     +L K 
Sbjct: 1003 RKYEKLVMDSSRVEHNIMSNIDYR----------AQINRLDETEFQLNSMDIENAQLQKE 1052

Query: 969  LLERD--RLLSEVNRCQ-------GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQL 1019
              +++  R+  E++          G +   +  I   K +L   +YK++D+ + ++ I+L
Sbjct: 1053 EYQQNSKRIRDEISNLSSEHAGKVGEVKQIKDQIETLKKEL-ATEYKNVDEMYHEEWIKL 1111

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS-- 1077
            +T  + + D+  Y  ALD A+M++H++KME+IN+I+ ELW QTY+G DI  I I SD   
Sbjct: 1112 QTNLLVSNDIQNYSKALDNAIMKYHSIKMEDINRILTELWSQTYQGTDISTIAIKSDVNL 1171

Query: 1078 EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPT 1137
            +  G RSY+Y+V+M    +EL+MRGRCSAGQKVLAS++IRLALAE F  NCGI+ALDEPT
Sbjct: 1172 QTKGNRSYNYRVVMVKDSSELDMRGRCSAGQKVLASILIRLALAECFGSNCGIIALDEPT 1231

Query: 1138 TNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDH 1197
            TNLD  NAE+LA AL+R+++ RK Q NFQLIVITHDE+F  L   R   + YYR+ +D+ 
Sbjct: 1232 TNLDSENAEALATALNRVIDYRKRQSNFQLIVITHDEKF--LSHLRGFTDHYYRIDRDEK 1289

Query: 1198 QHSII 1202
              S I
Sbjct: 1290 SKSRI 1294


>gi|147772260|emb|CAN60640.1| hypothetical protein VITISV_022226 [Vitis vinifera]
          Length = 246

 Score =  358 bits (920), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 179/220 (81%), Positives = 183/220 (83%), Gaps = 31/220 (14%)

Query: 982  CQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALM 1041
            C GT SVYQ+NIS++KIDLKQ QYKDIDKR+ DQLIQLKTTEMANKDLDRYYNALDK   
Sbjct: 52   CHGTTSVYQSNISKHKIDLKQTQYKDIDKRYCDQLIQLKTTEMANKDLDRYYNALDK--- 108

Query: 1042 RFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYK-----VLMQTGDA 1096
                                   GQDID IRIHSDSEGAGTRSYSYK     VLMQTGDA
Sbjct: 109  -----------------------GQDIDCIRIHSDSEGAGTRSYSYKDIFVQVLMQTGDA 145

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL RIM
Sbjct: 146  ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIM 205

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD
Sbjct: 206  EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 245


>gi|171694914|ref|XP_001912381.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947699|emb|CAP59861.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1320

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 336/1244 (27%), Positives = 614/1244 (49%), Gaps = 107/1244 (8%)

Query: 17   TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
            + ++  +S R  ++D+ VP  +GVS A+LE VIF HQDE+ WP+ +PS LKK+FD+IF A
Sbjct: 126  SSDRHVISTRVMELDKLVPEKLGVSPAVLEAVIFCHQDESMWPMSEPSALKKRFDEIFEA 185

Query: 77   TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
             +YTK ++ +K L K + +E++  K++    +  K+ A K+   I Q  ++ E  + +  
Sbjct: 186  MKYTKVIDNLKVLRKRKGEELRELKIQETQDKVNKERADKVGRLIIQMSQEIEEAQTKCS 245

Query: 137  ELEKSI----QDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE 192
            ++ K +    ++I DK       LK +  +Q++   +  +   + E + +      EE+ 
Sbjct: 246  DILKQMGAKAKEIKDKHEQANSFLKIVNDLQNKTEKLEYKSEAIRELRSR-----IEELP 300

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            D+D+ L+N    +   + +  +D  + + ++ ++   +K   Q+ D +TA++    +E G
Sbjct: 301  DSDDVLRNTLAEYAQTIERTVADRDRKQAQQQELQADLK---QSRDRHTAKV----AEQG 353

Query: 253  AHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
             H S       ++  RD  + +   RH +    +     +   +F  RI+  L+D +R+L
Sbjct: 354  KHQSDKDKYERQLATRDRMVHEAAERHEIRGY-DGDLDGDLIESFYERIQKALNDKKREL 412

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            E  +KS+  A ++   S + A      +E +KQ+    +A   + I     E  + + ++
Sbjct: 413  ERLQKSN--AEELDKKSSVIAE-----LEGRKQSLNRDRASAKQRIMAIGRESATVQGEL 465

Query: 366  SNLNLSHIDE-------RENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALN 418
             +L++    E       +E + RIE  +   Q A+   +  I++ Q E++ ++ +   L 
Sbjct: 466  GSLDVDEGSEAALRAEMKEVEARIEAAKADEQSAD--LDDQIKKVQDEIWQLETQAAKLG 523

Query: 419  REKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEIT 478
            RE       + +R +L L+K +L + ++    + + + +++  +L      D  ++ +  
Sbjct: 524  RELVECTRLASERAQLDLRKKQLTDRRRDLDILKNTWSEQLSALLGANWTPD-TVEADFQ 582

Query: 479  QALRALLTEFDDLSSKSRE----ADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL 534
             ALR    + D + +++R+      +E+  ++ K+    D  +K   ++ S +R +   L
Sbjct: 583  SALR----KQDGVVAEARKQKDATQQELKQVEYKLSTTRDRHTKLLTEMKSCQRDVLKAL 638

Query: 535  ESL----NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPC 590
             +     + +   ID Y+      + +    +S   + + M+  +   + VA  H+ C  
Sbjct: 639  RATRDENDPEHPPIDNYEAQTKHVETELAQIESDLKLTEEMKTYYTKVKTVAEKHNKCNL 698

Query: 591  CERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSK 650
            C+R F  +E+ +     ++  A   E  + L  + ++  +  +QL  +R  Y+ Y +L K
Sbjct: 699  CDRDFHNQEDVKRRVFNKIAKALGDEVKQELEADKADFAARLRQLKAVRAQYDTYGRLEK 758

Query: 651  ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQL 710
            E +P     L+  T + +   +  +D      + +  +  ++ L + V    +  ++IQ 
Sbjct: 759  E-VPTLSAELNVCTTQKEDLVRRLEDKDLAFGKAEEQRREMDSLSKNVLKISQNHKDIQE 817

Query: 711  WQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNI 770
             ++QV   E    S     R+ +EI  E +         Q  L KL  E++ +++  S +
Sbjct: 818  AERQV---ERSQQSSSVTTRSPDEINEEQTTYAEQTRVAQTRLNKLTVERQRLKDLASQL 874

Query: 771  QIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLL 830
            ++    LR +   AA  L   K  ++++    EE+ QL        E+      + E L 
Sbjct: 875  EVERLELRHKIATAAQQLERKKSLQDQIRRFKEEQAQL-------RESVQTADNDLEALE 927

Query: 831  SDYNDLKVKLN--REYEEQAEQKINFQQE-----IEMLLKIASKIKEYYDLRKDERFKEL 883
             +    +  L+  R++    EQ +  +++     +  L  I  +I+EY +          
Sbjct: 928  PEMATARSALDEVRQHGRAKEQNVTEKRDAIGGTVSELRMINGEIQEYLERGGPSNLASN 987

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFAS 943
            Q   +  E+ + S +    ++ V++++    + N D  +RNI DNL YR+   +      
Sbjct: 988  QRAITTLEATIASIEAEMKDLTVQINKLNKEIDNSDAKKRNISDNLTYRKNLRERVALQQ 1047

Query: 944  EIE--------------SLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
            EIE              SLE R+L        E + G    ER+RL+  V      +S  
Sbjct: 1048 EIEELKSRKAEEDYQRLSLEARIL--------EDQRGLLTAERERLMGSVASKDDQLSRL 1099

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            Q       +DLK A+ K     + +  I+++TT+ A  DL R   ALD A+M+FH++KME
Sbjct: 1100 QEEYD---LDLKGAKAK-----YKESHIKVETTKAAIDDLGRGTMALDHAIMQFHSLKME 1151

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT------RSYSYKVLMQTGDAELEMRGR 1103
            EIN+II ELW++TY+G DID I+I SD E          R+Y+Y+V M  GD E++MRGR
Sbjct: 1152 EINRIIGELWRETYQGTDIDTIQIRSDVESGAGSGGGGKRNYNYRVSMVKGDTEMDMRGR 1211

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N  SLA++LHRI++ R+ Q 
Sbjct: 1212 CSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDSDNIRSLASSLHRIIKARQSQG 1271

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            N QLIVITHDE F + +  +   + +YRV ++  Q+S+I  + I
Sbjct: 1272 NLQLIVITHDEEFLKHMRCQDFCDTFYRVERNARQNSVIRVENI 1315


>gi|449528203|ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 299

 Score =  357 bits (917), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 171/192 (89%), Positives = 183/192 (95%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQDEANWPL
Sbjct: 108 MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQA EIKTYKLKLENLQTLKDAAYKLRES
Sbjct: 168 QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRES 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           ISQDQEKTE++K QMQELEK+IQD+D KIHH E  LKD+RK+QDQIST TA RSTL+++Q
Sbjct: 228 ISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQ 287

Query: 181 QKQYAALAEEIE 192
           QKQYAAL+EE E
Sbjct: 288 QKQYAALSEENE 299


>gi|429849881|gb|ELA25211.1| DNA repair protein rad50 [Colletotrichum gloeosporioides Nara gc5]
          Length = 1307

 Score =  356 bits (914), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 343/1251 (27%), Positives = 620/1251 (49%), Gaps = 103/1251 (8%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K +E  L   N   GE+   S R A MD  +P  +GVS+AIL+ VIF HQDE+ WP+ +P
Sbjct: 109  KTLEGSLACNN--NGERTVTSSRVAQMDEWIPRELGVSRAILDYVIFCHQDESLWPMSEP 166

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDA-------AYK 116
            + LKK+FD IF A RYTKA++ +K L K Q +E+   K+  E  +  K+        A +
Sbjct: 167  AALKKQFDQIFEAMRYTKAVDNLKLLRKKQGEELSKLKIFEEQDRINKEKGDRAEKRATE 226

Query: 117  LRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL 176
            L   I   + K + +  +M++L++ I++  ++ +     + DL+  +DQ++      S L
Sbjct: 227  LEAEIEAARAKCKTMSAEMEDLQEQIREKHEQANSFLRIVNDLKFKRDQLTYREGAISDL 286

Query: 177  FEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQN 236
                        EE+ + DE LKN    +E         +S+ + E ++  T+   L+++
Sbjct: 287  --------KMTLEELSEDDEYLKNALEQYE-------ERMSRYQEEADENKTQYNELQRD 331

Query: 237  IDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNL----GSLPNAPFSNE 285
            + +   E++  L+E G H S       ++  R   +++    H      G L ++     
Sbjct: 332  MTSSRKELSLKLAEQGKHQSDKDKYERQLQSRMELVRQAAEMHGFRGYDGDLKDSQIKT- 390

Query: 286  AALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKA 345
                F  RI+  L+D +RDLE  +K +   L  A +   +       +E +K    + + 
Sbjct: 391  ----FNERIQKLLADKKRDLERVQKENARELDQATNVITE-------LEGRKATMTQNRV 439

Query: 346  GILKHIKEKENERDSFELQISNLNLSH-----IDERENKMRIEVERKTNQLAEREFEINI 400
               + +   E   +  ++ I+ L++       +D +   +   +++    LA  +F+  +
Sbjct: 440  FAKQRLGAIEKRVNVLQMDINRLDIDEGAKAILDSQFEDVESRLKKANESLAAADFDAQL 499

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
            +Q   +L+ ++ + + L RE       + +R +L L+K EL + K+K   + + +K K+ 
Sbjct: 500  QQDNEKLWQLESENEKLGRELMECTRLASERAQLDLRKKELSDRKRKLDTLTNTWKSKL- 558

Query: 461  DVLKGRLPLDRDLKKEITQALRA---LLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS 517
            D   G       L+ +    +++   +L E       +R+  ++V+    +++   +   
Sbjct: 559  DTHVGTAWQTETLESQYHDVIKSQNKVLAEARQKRESARDKHQKVDY---RLKSAKETGQ 615

Query: 518  KHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            K   +    +  + + L+S+     +I+ Y++     +E  +  ++  ++ D +   +  
Sbjct: 616  KKTAEASRCQETVVNALKSVRDGA-TIEDYEEEYKLHEEDVETYQTDISLLDALADYYRG 674

Query: 578  FERVARAHHVCPCCERPFSAEE-------EDEFVKKQRVKAASSAEHMKVLSLESSNADS 630
             ++  +  + C  C+R F  ++        D+ VK         AE       + +N+ +
Sbjct: 675  CQKTLQDKNKCRLCDRGFDDKQNVAKSRFSDKLVKFLDPNKKEKAEE------DLANSTN 728

Query: 631  YFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
                L K++  YE Y +L  E IP  ++    L  E +   +  ++   + +  +     
Sbjct: 729  LLNSLRKVKPQYETYQRLMAE-IPGVKEECSSLEAECEALERQLEEHDAIASAEEEKLND 787

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNL 749
            VE L + V    +  ++I+  + QVD +     S     R+ +EI  EL  + + +  +L
Sbjct: 788  VESLNKTVINITQALKDIKDSESQVDRI-MSQQSSSVASRSADEIH-ELQATCNEQIRSL 845

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD 809
            +N++ K   E++ M++ L+ +++    LR +  KA N L   K  + +++ L +++    
Sbjct: 846  KNKILKTSTERQRMKDQLNALELEKSELRNKLSKALNQLERKKDFQNQIQTLKDDQTH-- 903

Query: 810  LDEKLLAEASGPLSK---EKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIAS 866
               +L+++A   L K   E  +  S  ND   K   + +   E++      +  L  +  
Sbjct: 904  -QRELISKADEDLEKIEPEITEARSVRNDTLQKGRTKEQGIVEERDKVANSVTELKMVEC 962

Query: 867  KIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQD 919
             I++Y D      L  +ER    L++  +  + E+    +RT+++  ++D       N D
Sbjct: 963  DIQDYIDRGGPSNLASNERAIAALEKSIAGLDKEISDLTVRTNKLKQDID-------NGD 1015

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER-DRLLSE 978
            + ++NI +N+ YR+   +++    +I+ LE R        T   E  K L  R  RL++E
Sbjct: 1016 RKKQNISNNIKYRQNLQQLEVLRRDIQDLEARDAD-EDYRTLAAE-AKQLENRHSRLVAE 1073

Query: 979  VNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDK 1038
                 G M+     + R   +  Q +YKD  K+  +  I+++TT+ A +DL RY  ALDK
Sbjct: 1074 RGSVMGQMTTKDKELERVLEEWNQ-EYKDAAKKFRESHIKVETTKAAIEDLGRYSAALDK 1132

Query: 1039 ALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA--GTRSYSYKVLMQTGDA 1096
            A+M++H++KMEE+N+I  ELWQ TY+G DID I I SD+E A  G RSY+Y+V M   D 
Sbjct: 1133 AIMQYHSLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNENASTGRRSYNYRVCMVKQDT 1192

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +LH I+
Sbjct: 1193 EMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHAII 1252

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + R+ Q NFQLIVITHDE F + +      + ++RV +DD Q+S+I  + I
Sbjct: 1253 KARQAQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVRRDDKQNSVITKESI 1303


>gi|406865047|gb|EKD18090.1| DNA repair protein rad50 [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 1374

 Score =  355 bits (910), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 331/1248 (26%), Positives = 600/1248 (48%), Gaps = 84/1248 (6%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +ES L   +  +GE++ +S   AD +  VP  +GVS AILENVIF HQDE+ WP+ +
Sbjct: 167  FKTLESNLMMKSKRSGERISISSTVADCNAIVPQQLGVSSAILENVIFCHQDESLWPMLE 226

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LK KFD+IF A +YTKA+E I K+ K   + +   K+   N + LKD + K+   + 
Sbjct: 227  PSKLKLKFDEIFEAQKYTKAIENIIKVKKGHQENLGKLKIHESNFKELKDMSVKIEHKMH 286

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL--FEQQ 180
            + QE+ +AL  +   L++ I D + K+   +  L  L   Q    ++  +R     +E  
Sbjct: 287  RLQEEIDALTEKRSALDREIADAE-KVSREKRGL--LETAQGVKYSLAQKRGQAENYEYT 343

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             +  +    E++++DE L++    +E  +A  ++   +L  + N +   +K   + I A 
Sbjct: 344  LESLSDNLTELQESDEWLRDTLGQYEQRMADYQTSRVELMEKHNHLGRDVKKNREQISAK 403

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
              E     S+   +  ++ +R + IQ+    H++    +     +A   F+ ++     D
Sbjct: 404  EIEQGQRQSQQETYERQLIQRVNYIQEAAQEHSIRGY-DGDLGEDAIRQFVGKLHKLSKD 462

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDS 360
             +R+L   +K+    LK          +R   +   KQ K+     I       +NER  
Sbjct: 463  KDRELAGARKTTSEELKQTQGVLSQLENRQATL---KQEKVHAGQAIT------DNER-R 512

Query: 361  FELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKA---- 416
              L+ S +N   IDE    +   +E K N+L E    ++    ++E    DQK+KA    
Sbjct: 513  IRLKQSEMNSISIDEGAKAV---LESKINELQEM---LDKATSKAEAAGWDQKLKAEKSR 566

Query: 417  ----------LNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
                      LN E       ++DR  L   K + +  +     +I  YKD++ + +   
Sbjct: 567  LQQLEEQLEKLNDELFQSNKLAKDRAALDYAKQQAKESRSSLNAMISTYKDQLTEAIGNW 626

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD-S 525
             P  ++L  E    L+   +  DD  +    A + +N +  +++    +L+K   ++  +
Sbjct: 627  TP--QNLATEYESVLQQRKSAVDDAKANQDNAIQRLNEIGFELKTARSSLAKKNNELQKN 684

Query: 526  KKRFIESKLESLNQQIFSIDTYQKVLDSAKE-KRDVQKSKY--NIADGMRQMFDPFERVA 582
            + +   S LE   +    I T  + L   +E + D+ K +     A  ++QM+D F    
Sbjct: 685  QAKLFTSILEVEGEDPVEITTLDQYLQEYQELEADLAKCRSLSTGAGSLKQMYDKFIETI 744

Query: 583  RAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHM------KVLSLESSNADSYFQQLD 636
               + C  CER F+ +        QR  A++  + M      +VL  E    +  F+  +
Sbjct: 745  DQKNCCRLCEREFANQ-------TQRAHASTKLKKMIADLDKEVLKEELEANEKAFKVAE 797

Query: 637  KLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQ 696
              R +Y+   KL    IP    ++  L  E   +    +    ++   ++ K  +E   +
Sbjct: 798  PARPLYDVCKKLQDIEIPALNNDIKRLEGEKATRVATCERHDRLVYDEESAKRDMEGFAK 857

Query: 697  PVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKL 756
             V    +   EI   + ++  L       G  + T++++  +++        L+ ++EKL
Sbjct: 858  AVSDITKYNNEIFKHENEITKLSSQDMLSGSSL-TIDDLGEQIAACNEKIRALKPKIEKL 916

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTL---RDVKKAEEEL-EHLMEEKGQLDLDE 812
             +++    N++ +++ R      E  +A N L   +D+  A +E  E++ ++K  +   +
Sbjct: 917  VNDKENSRNEIIDLERRLGAATTELDRAQNALEKKQDIISAIDEFREYINQQKATVSKAD 976

Query: 813  KLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
              L       +K + +    + D+K++ + +  E    K      +     +  +I  Y 
Sbjct: 977  AELESLEPDFAKARRQ----HEDVKLRGDTKANEIQAAKDKVASTVNKFKIVEDEINGYI 1032

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            +    ++ K    +  + + E ++ +     I+ E+++ KD + + D+ +++I+DN+ YR
Sbjct: 1033 ENGGPDKLKACTREIKRLKDEQETIEKEIAAIVQEINKLKDRIADSDKTKKDIQDNIRYR 1092

Query: 933  ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL-------LSEVNRCQGT 985
            + + +++   +EI  LE            + E   +L E +R         +E     GT
Sbjct: 1093 KARRELEAVRTEIAELE--------THNADEEYEMYLREYNRSEKRRELKTAERGPITGT 1144

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
            ++    ++ +   D  +  YK   + +    I+++TT+ A  D+ +   ALD A+++FH+
Sbjct: 1145 ITAKDEDLGKTMEDY-ETDYKSAAEDYRKAHIEVETTKAAIDDMVKCTKALDSAILQFHS 1203

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQTGDAELEMR 1101
            +KMEEIN I  ELW+ TY+G D+D I + SD+E   T    R+++Y+V+M   DAE++MR
Sbjct: 1204 VKMEEINSIAGELWRATYQGTDVDTIMVRSDNENVSTTTTRRNFNYRVVMVKQDAEMDMR 1263

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQKVLA +IIRLALAE F +NCG++ALDEPTTNLD  N  +LA +LH+I+E R+ 
Sbjct: 1264 GRCSAGQKVLACIIIRLALAECFGVNCGVIALDEPTTNLDEDNIRALAGSLHKIIEQRRH 1323

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            Q NFQLI+ITHDE F + +      + YYRV+++  Q S+IE Q + D
Sbjct: 1324 QPNFQLIIITHDEEFLKEMKCNDFTDSYYRVSRNAAQKSVIEVQSLAD 1371


>gi|354545490|emb|CCE42218.1| hypothetical protein CPAR2_807670 [Candida parapsilosis]
          Length = 1315

 Score =  354 bits (909), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 348/1251 (27%), Positives = 617/1251 (49%), Gaps = 119/1251 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K++E  L  I    G+K  +S + A++D ++P  +G S AIL+NVIF HQDE+ WPL
Sbjct: 127  VTFKSMEGQLAYI--ENGKKTSISSKNAELDSQIPIFLGASTAILDNVIFCHQDESLWPL 184

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             + S LKKKFDDIF A+R+TK ++ +K + KD A +IK  +  + +L+  KD A K+R+ 
Sbjct: 185  SEASVLKKKFDDIFEASRFTKVIDNLKSIKKDMATDIKLIEQSVNHLKIDKDRAKKVRDR 244

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +++  +  E   +++ EL   I+  D +      T ++ +K       +  +R++L E  
Sbjct: 245  LTEMNQSVETFASEISELNIQIEQKDIEAEKLFATNQEFQKTLSDYENLLMKRTSLTETI 304

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
             +  +++ E + D+DEEL + + NF  IVA+ +  I KL+   ++       L  +++  
Sbjct: 305  DRIKSSI-EILPDSDEELLHKQENFAAIVAENKESIRKLQNVGDN-------LSSSLNEK 356

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKL--FARHNLGS---LPNAPFSNEAALNFINRIR 295
            T E   L+   G+  ++  + DS   KL    ++N      L     +N A   F + + 
Sbjct: 357  TEEYNELIRLDGSLKAKKADYDSNKVKLTQIIKNNAAEVEELGGDELTNLA--KFKDAVT 414

Query: 296  SRLSDL---ERDLEDKKKSDEL----ALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGIL 348
            S+L DL   E+DL+   KS E+     LK   D  +      + I++  Q   +    + 
Sbjct: 415  SKLVDLQKQEKDLQSTNKSIEIEKQKLLKEVEDKIIKDEQSLEYIDSDVQKSQQSLLQLK 474

Query: 349  KHIKEKENERDSFELQISNL--NLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSE 406
            + +    N+      Q   L   +  +D ++NK  ++           + +I I +  +E
Sbjct: 475  RKLDATSNDESDLVSQKGELATTIEELDAKKNKKEVD-----------KLDIQITKANAE 523

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
               ++ +   L++     +  SE R K+   + E+E       KI  ++  + ++V    
Sbjct: 524  NVKLEFEADELSKRLSKSSKQSELRTKIKYLQDEIELKNASITKIAKKFNSEYKEV--AG 581

Query: 467  LPLDRDLKK-EITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
            + LD D  + ++ +    L TE +    K      E++ ++   Q + +N+S +   +D 
Sbjct: 582  IDLDVDFAEAKLEERYEELKTEVETQQKKVYGIQSEIDSMKSSRQGILNNISDNLSKIDK 641

Query: 526  KKRFIESKLESLNQQIFSIDTYQKVL-DSAKEKRDVQKSKYNIADGMRQMFDPFERVARA 584
             K  I   +     Q   ID Y+ +L D  ++ R+V +   N ++  +        +A  
Sbjct: 642  LKSDITDVI-----QESEIDEYENILYDLEEDYRNVTED-VNTSEVTKSYGKSALEMAEK 695

Query: 585  HHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV--- 641
            +  C  C+R F      +FVK+  +K     E ++ +     NA+   ++LD  + +   
Sbjct: 696  NKCCLLCKRMFDDPALQKFVKE--LKQGFDEEKIREVK---RNAEEIGKELDATKRISLK 750

Query: 642  ---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
               Y E   L     P  E +L+ L +++++ S         L  ++   E    L +P+
Sbjct: 751  VINYRECATLK----PKLEADLNVLDDKINELSDTLKTETKTLEGMRHSFEFAVNLKKPL 806

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK--------DNLQ 750
            + A RL  E+Q    +VD L   LD  G  + ++EE+Q +    +S K         +L 
Sbjct: 807  DDASRLNLEVQDLDLKVDKLNDELDEFGSTITSIEELQNQ-QQEISVKRREVRQHVTDLN 865

Query: 751  NELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDL 810
            +E  K++   + +EN + + ++    L     +  N  R ++  E  +  L  E   L++
Sbjct: 866  DEKYKVQKNIQRLENKVKDTRLTISNLERSLAEVQNIKRSIQDVETNIAGL--ESNGLEM 923

Query: 811  DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEI----EMLLKIAS 866
              +L       L KE+++   +   ++++     EE+  +++     I    + LL   +
Sbjct: 924  RSRL-----SRLRKERDRAFLELKQIQME-QSSAEEKMSKRVKLIGSIVDTFQTLLTAVT 977

Query: 867  KIKEYYDLRKDERFKELQEKKSQSESEVK---SCKIRTDEILVELDRFKDIVRNQDQIRR 923
               E  DL K      L+E  ++ E+ VK   S K +  E    + +F+ +V +  ++  
Sbjct: 978  DF-ETIDLPK------LEENFAKMEAIVKETDSIKAQISENSNVVKKFEKLVMDSSRVEH 1030

Query: 924  NIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLE------RDRLLS 977
            NI  N++YR          +++  L+E   ++  +     +L K   +      RD +  
Sbjct: 1031 NIVANIDYR----------AQVSRLDETEFQLNSMDIENAQLQKEEYQQNSKRIRDEISD 1080

Query: 978  EVNRCQGTMSVYQTNISRNKID-LKQ---AQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              +R  G   V +    +++I+ LK+    +YK++D+ + ++ I+L+T  + + D+  Y 
Sbjct: 1081 LSSRHAG--KVGEVKQIKDQIETLKKELATEYKNVDEMYHEEWIKLQTNLLVSNDIQNYS 1138

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYSYKVLM 1091
             ALD A+M++H++KME+IN+I+ ELW QTY+G DI  I I SD   +  G RSY+Y+V+M
Sbjct: 1139 KALDNAIMKYHSIKMEDINRILTELWSQTYQGTDISTIAIKSDVNLQAKGNRSYNYRVVM 1198

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
                +EL+MRGRCSAGQKVL+S++IRLALAE F  NCGI+ALDEPTTNLD  NAE+LA A
Sbjct: 1199 VKDSSELDMRGRCSAGQKVLSSILIRLALAECFGSNCGIIALDEPTTNLDSENAEALATA 1258

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            L+R+++ RK Q NFQLIVITHDE F  L   R   + YY++ +D+   S I
Sbjct: 1259 LNRVIDYRKRQSNFQLIVITHDEMF--LSHLRGFTDHYYKIDRDEKSKSRI 1307


>gi|242769947|ref|XP_002341877.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500]
 gi|218725073|gb|EED24490.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500]
          Length = 1328

 Score =  354 bits (908), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 345/1243 (27%), Positives = 624/1243 (50%), Gaps = 121/1243 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 150  GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 209

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  +K+  ++ +  KD A +  +   + QE+ EAL+ +  +
Sbjct: 210  KYTKAIDNIKALRKKQNEELAKFKIMEQHSKEDKDKADRAEKRSIKLQEEIEALREETHQ 269

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            + + +++        EL  K  ++ +     + A      E +  Q           E++
Sbjct: 270  ISQEMRNA------AELADKAWKESESYAQVIGALEGKRIEARSIQLTIDNLKRHLVEVD 323

Query: 193  DTDEELKNWKNNFEG--IVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSE 250
            ++DE L++    FE   +  +++ D  K ER   D+  +I+   + +    AE     ++
Sbjct: 324  ESDEWLQSSLEQFESRQLEYQQQEDAQK-ERYM-DIKEQIESTREQLGLKQAETGKYEND 381

Query: 251  AGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN-FINRIRSRLSDLERDLEDKK 309
                  ++  R++ I++    +N+    +A   +E+ ++ F++R++  + +  + LE  +
Sbjct: 382  KDQFERQIRRRENMIKEFARENNIRGFDDAL--DESKIDEFMHRMQKMVKEHSQALERAR 439

Query: 310  KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLN 369
            K  +  L+       +  +    I  +K A  E K    + I +  N+R++  +Q S LN
Sbjct: 440  KEGQSELR-------ETQNVLNQIAQRKSAFQETKNVARRQIAD--NDREAASVQ-SRLN 489

Query: 370  LSHIDE----------RENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
               +DE           E + R+E  +   ++A   ++ +++   ++L +++ +   LN+
Sbjct: 490  EIDVDEGTVAVLESKKEEAQSRLEKLKDAARVAT--WDKDLQDANTQLRSLEDESTKLNQ 547

Query: 420  EKDVLAGD--SEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL-P--LDRDLK 474
            E  ++AG   + D  +LA  K EL++ +++ + +   + +++  ++  +  P  L+R+ +
Sbjct: 548  E--LIAGTKKAGDLARLAHLKKELKDRERQLETMSGAHGNRLSQLVSEQWNPDNLEREYQ 605

Query: 475  KEITQALRALLTEFDDLSSKSREA-DKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESK 533
              +T A   +      L+ ++R+   +E++ ++ K+++    L K +K+ D   + I   
Sbjct: 606  NVLTDASNNMT-----LAERNRDGVGRELDQVEYKLKDCRTALEKRKKERDECVKKIRDA 660

Query: 534  LESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCER 593
            ++           Y  VL + +   D  +       GM + F+       +  +C  C R
Sbjct: 661  IDD------DPTEYSDVLQTRQNHLDQTRKDVEQFTGMHEYFNMCLEAVDSKKMCRTCMR 714

Query: 594  PFSAEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---Y 642
            PF  E E        +  +KK     +SS E +K    +  NA          RM    Y
Sbjct: 715  PFKNETEMRTFRNRLEGLIKK---NFSSSDEDLKQAEEDYENA----------RMANTDY 761

Query: 643  EEYVKLSKETIPVAEKN---LHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVE 699
            + +++L++  IP  EKN        EE+ +K ++ D  +   A+    K  +E L + V 
Sbjct: 762  DTWLRLTETAIPELEKNEEQYQSQKEEILKKLESHDTTVDDRAE---KKREIESLSRTVT 818

Query: 700  TADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDE 759
            +  R+  EI+  + Q+ ++      +    R +E+IQ              N++  + ++
Sbjct: 819  SIVRIDSEIKSLRSQIAEVSSK-QQQTDSTRVLEDIQ--------------NDIAAVGEK 863

Query: 760  QRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL----------D 809
             R ++  +S +       R+E  +A   LRDVK   +   H +E+K  L          +
Sbjct: 864  SRAIKLTISKLSSEKEQSRDELNRAELALRDVKSNLDNGSHQLEKKTSLLARVEEYKRMN 923

Query: 810  LDEKLLAEASG----PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIA 865
              ++   E +      L  E  K  + ++D+  +   +  E  +   +    +  L    
Sbjct: 924  AKQRESIENADRYIEQLEPEIAKAQAKFDDINRRAESKERELQQALTHLSDRLHQLNLAN 983

Query: 866  SKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNI 925
             +IK Y D    E+  + +++    + ++K+ +    EI   +++    +++ D  RR  
Sbjct: 984  DEIKSYIDRGGPEQLIKSRKELEDIQQQIKTLEGEQSEITRAINKISAQLKDSDNTRRQY 1043

Query: 926  EDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGT 985
             DNL+YR++   +++   EI+ LEE+  +I   S F+ E  +   + + L ++     G 
Sbjct: 1044 SDNLSYRQSCRLLEEVQDEIQQLEEQNAEIDR-SRFKEESERWTRKHNALAAQQASKMGE 1102

Query: 986  MSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
            M      + +   D     YKD    + +  I+++TT+ A  DL RY  ALDKA+M++H+
Sbjct: 1103 MKSKDDQLLQLLADWN-TDYKDAAANYKEAHIKVETTKAAVDDLGRYGGALDKAIMKYHS 1161

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRC 1104
            +KMEEIN+I+ ELWQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRC
Sbjct: 1162 LKMEEINRIVEELWQRTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRC 1221

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            SAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q N
Sbjct: 1222 SAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKTRQQQAN 1281

Query: 1165 FQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            FQLIVITHDE F   +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1282 FQLIVITHDEEFLHHMQCGDFSDYYYRVSRNERQKSIIERQSI 1324


>gi|391870133|gb|EIT79321.1| DNA repair protein RAD50, ABC-type ATPase/SMC superfamily
            [Aspergillus oryzae 3.042]
          Length = 1309

 Score =  352 bits (902), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 358/1230 (29%), Positives = 611/1230 (49%), Gaps = 94/1230 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 130  GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 189

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ E L+ + Q+
Sbjct: 190  KYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQQEIETLREETQQ 249

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L   ++ +       EL  K  R+ +     +        E +  Q           E++
Sbjct: 250  LSLEMRRV------AELADKAWRESESYSQVLGTLEGKRIEAKSIQSTIDNLKRHLVELD 303

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK--IKFLEQNIDAYTAEITNLLSE 250
            D+DE L++    FE    + E    +  R++N M+ K  I+   Q +    AE     ++
Sbjct: 304  DSDEWLQSNLEQFESKQLQYEQ--QEEARKENYMEIKEQIERTRQKLGVKQAEYGKFEND 361

Query: 251  AGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKK 309
              A+  R  ER   + K  AR +N+    N    N+    F+ ++R  L D  + L+  K
Sbjct: 362  K-ANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVD-EFMRKVRKLLKDQNQTLDRVK 419

Query: 310  KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLN 369
            +  +  L+    +  D       I  QK A  E K    + I   + E  +++ +++ +N
Sbjct: 420  REAQGELREVQTALND-------IAQQKSALQETKNAAKRQIAANDKESTTYQGKLNEIN 472

Query: 370  LSHIDER-ENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDS 428
               +DE  +  +   +E   + L + +          E+  ++ +I+ L  E   L  + 
Sbjct: 473  ---VDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKEIHDINSEIRGLEDESSRLNSEL 529

Query: 429  EDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKG----RLP--LDRDLKKE-ITQAL 481
             D  K A   A L++ KK+ K+     +++  + +KG    RL   + +D K + + Q  
Sbjct: 530  IDATKRAGDLARLDHLKKELKE-----RERSLETMKGAHGERLSKFVGQDWKPDTLEQEF 584

Query: 482  RALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQI 541
            + +L E    S +   A+ E + +  ++++V   L   +K +  +++ ++  +E + + I
Sbjct: 585  QHVLEEE---SKQVSRAENERDGVSRELEQVEFRLKNTKKVLGQRQKALKECIEEIREAI 641

Query: 542  FS-IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
                + + +VL   + + D+ +       G+ +         +   VC  C R F ++ E
Sbjct: 642  NDEPEEFPEVLKQRQAQLDIARKDAEQYAGIGEYMATCLETVKQSKVCRLCHRGFKSDAE 701

Query: 601  --------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKLSK 650
                    +  VKK   K  +  E +K L   LE++ + S           Y+ + +  +
Sbjct: 702  LQTFRNKLENLVKK--AKRDADDEDVKNLEEDLEAARSAS---------TSYDTWSRFQQ 750

Query: 651  ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQL 710
              IP  EK   +   + D+     +D   ++++    K  VE L + V T  R   EI+ 
Sbjct: 751  TEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEALAKTVNTIVRYDGEIKS 810

Query: 711  WQKQVDDLEYMLDSRGQ---GVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDL 767
             + Q+ DL     S+ Q     RT+E+IQ E++        L+  L KL  E+   + ++
Sbjct: 811  IRSQIQDL----SSKQQDTTSARTLEDIQEEIAAIGEKSRALKKSLSKLTHEKEQTQTEI 866

Query: 768  SNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP---LSK 824
            +N++++   LR+ K    N    +++  + L  + E K   +   + +A+A      L+ 
Sbjct: 867  NNLELQ---LRDVKSNLDNAKFQLERKSDLLARIEEYKNLNNQQREAIAKADRDIEDLTP 923

Query: 825  EKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKEL 883
            E  K+ + Y+D+  +   RE E Q  Q I+   E    L++A++  + Y+    ER    
Sbjct: 924  ELLKVQAKYDDISQRAEAREREMQ--QTISQMSESVHQLELANEEIDAYN----ERGGPT 977

Query: 884  QEKKSQSESE-----VKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            Q ++S+ E E     +   +     I  E+++    +++ +  +R   DNL YR+    +
Sbjct: 978  QLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSENTKRQYADNLTYRQATRAL 1037

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
            D+   EIE L  +  ++   S F+ E  +   E + L ++     G M      + +   
Sbjct: 1038 DEVTQEIEQLAAQNAEVDR-SRFKDESERRTREHNALAAKQAGRMGEMKSKDDQLMQLLA 1096

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN I+ EL
Sbjct: 1097 DWN-TDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIVGEL 1155

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIR
Sbjct: 1156 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIR 1215

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 1216 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQAQSNFQLIVITHDEEFL 1275

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1276 RYMQCGDFSDYYYRVSRNEKQKSIIERQSI 1305


>gi|317138239|ref|XP_001816777.2| DNA repair protein Rad50 [Aspergillus oryzae RIB40]
          Length = 1448

 Score =  352 bits (902), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 358/1230 (29%), Positives = 611/1230 (49%), Gaps = 94/1230 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 252  GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 311

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ E L+ + Q+
Sbjct: 312  KYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQQEIETLREETQQ 371

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L   ++ +       EL  K  R+ +     +        E +  Q           E++
Sbjct: 372  LSLEMRRV------AELADKAWRESESYSQVLGTLEGKRIEAKSIQSTIDNLKRHLVELD 425

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK--IKFLEQNIDAYTAEITNLLSE 250
            D+DE L++    FE    + E    +  R++N M+ K  I+   Q +    AE     ++
Sbjct: 426  DSDEWLQSNLEQFESKQLQYEQ--QEEARKENYMEIKEQIERTRQKLGVKQAEYGKFEND 483

Query: 251  AGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKK 309
              A+  R  ER   + K  AR +N+    N    N+    F+ ++R  L D  + L+  K
Sbjct: 484  K-ANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVD-EFMRKVRKLLKDQNQTLDRVK 541

Query: 310  KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLN 369
            +  +  L+    +  D       I  QK A  E K    + I   + E  +++ +++ +N
Sbjct: 542  REAQGELREVQTALND-------IAQQKSALQETKNAAKRQIAANDKESTTYQGKLNEIN 594

Query: 370  LSHIDER-ENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDS 428
               +DE  +  +   +E   + L + +          E+  ++ +I+ L  E   L  + 
Sbjct: 595  ---VDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKEIHDINSEIRGLEDESSRLNSEL 651

Query: 429  EDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKG----RLP--LDRDLKKE-ITQAL 481
             D  K A   A L++ KK+ K+     +++  + +KG    RL   + +D K + + Q  
Sbjct: 652  IDATKRAGDLARLDHLKKELKE-----RERSLETMKGAHGERLSKFVGQDWKPDTLEQEF 706

Query: 482  RALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQI 541
            + +L E    S +   A+ E + +  ++++V   L   +K +  +++ ++  +E + + I
Sbjct: 707  QHVLEEE---SKQVSRAENERDGVSRELEQVEFRLKNTKKVLGQRQKALKECIEEIREAI 763

Query: 542  FS-IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
                + + +VL   + + D+ +       G+ +         +   VC  C R F ++ E
Sbjct: 764  NDEPEEFPEVLKQRQAQLDIARKDAEQYAGIGEYMATCLETVKQSKVCRLCHRGFKSDAE 823

Query: 601  --------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKLSK 650
                    +  VKK   K  +  E +K L   LE++ + S           Y+ + +  +
Sbjct: 824  LQTFRNKLENLVKK--AKRDADDEDVKNLEEDLEAARSAS---------TSYDTWSRFQQ 872

Query: 651  ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQL 710
              IP  EK   +   + D+     +D   ++++    K  VE L + V T  R   EI+ 
Sbjct: 873  TEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEALAKTVNTIVRYDGEIKS 932

Query: 711  WQKQVDDLEYMLDSRGQ---GVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDL 767
             + Q+ DL     S+ Q     RT+E+IQ E++        L+  L KL  E+   + ++
Sbjct: 933  IRSQIQDL----SSKQQDTTSARTLEDIQEEIAAIGEKSRALKKSLSKLTHEKEQTQTEI 988

Query: 768  SNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP---LSK 824
            +N++++   LR+ K    N    +++  + L  + E K   +   + +A+A      L+ 
Sbjct: 989  NNLELQ---LRDVKSNLDNAKFQLERKSDLLARIEEYKNLNNQQREAIAKADRDIEDLTP 1045

Query: 825  EKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKEL 883
            E  K+ + Y+D+  +   RE E Q  Q I+   E    L++A++  + Y+    ER    
Sbjct: 1046 ELLKVQAKYDDISQRAEAREREMQ--QTISQMSESVHQLELANEEIDAYN----ERGGPT 1099

Query: 884  QEKKSQSESE-----VKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            Q ++S+ E E     +   +     I  E+++    +++ +  +R   DNL YR+    +
Sbjct: 1100 QLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSENTKRQYADNLTYRQATRAL 1159

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
            D+   EIE L  +  ++   S F+ E  +   E + L ++     G M      + +   
Sbjct: 1160 DEVTQEIEQLAAQNAEVD-RSRFKDESERRTREHNALAAKQAGRMGEMKSKDDQLMQLLA 1218

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN I+ EL
Sbjct: 1219 DWN-TDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIVGEL 1277

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIR
Sbjct: 1278 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIR 1337

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 1338 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQAQSNFQLIVITHDEEFL 1397

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1398 RYMQCGDFSDYYYRVSRNEKQKSIIERQSI 1427


>gi|346325821|gb|EGX95417.1| Recombination/repair protein Rad50 [Cordyceps militaris CM01]
          Length = 1307

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 346/1244 (27%), Positives = 610/1244 (49%), Gaps = 90/1244 (7%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GEK   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVLN--NGEKTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLEN----LQTLKDAAYKLRE 119
            S LKK+FD+IF A +YTKA+E +K L K Q +E+     KL+N     +  KD   +  +
Sbjct: 168  SVLKKRFDEIFEALKYTKAIENLKVLRKKQVEELG----KLQNDEFHNKGNKDRGDRAEK 223

Query: 120  SISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQ 179
             ++  Q + EA + + + +   +Q+  DKI           ++   +  +  +R  L  +
Sbjct: 224  RMTGLQAEIEAAREKCEAITAHMQETQDKIKQKHEQANSFLQI---VQNLGNKREQLDYR 280

Query: 180  QQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDA 239
            Q        +E+  T +EL     + E  + + E  + +   E     T+   L+Q++  
Sbjct: 281  QDA-----VDELRQTIDELPEDDRSLERQLVQYEESMRRQSEEAQRNKTQYGDLQQDLVK 335

Query: 240  YTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
                ++  L+E G H S       ++  R   +Q+    H      +   ++     F +
Sbjct: 336  SRKSLSTKLAEQGKHQSDKEKHERQLKMRMEMVQEAAQHHGFRGYED-DLTDALIKQFND 394

Query: 293  RIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIK 352
            +I+   ++ +R+LE  +K +   L  A  +           E QK A+ + +       K
Sbjct: 395  KIQKLFAEKKRELERLQKENAAELDKASATI-------SEFEGQKAARTQDRVSA----K 443

Query: 353  EKENERDSFELQISNLNLSHIDERENKMRI------EVERKTNQLAEREFEI-----NIR 401
            +++   +   + + N   S ID  E    I      E+E K +Q+  REFE       I 
Sbjct: 444  QRQGAIEKRTIVLQN-EASSIDVDEGLKAILDGQLGELESKFSQV-HREFETAAWDNQIS 501

Query: 402  QKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRD 461
             + ++L+ ++ + + L RE       + +R +L  ++ EL + K K   + + ++ K+  
Sbjct: 502  DENAKLWQLESESEKLGRELIECTRLASERAQLDFRRKELSDRKLKLTSLTETWRSKLDK 561

Query: 462  VLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRK 521
            V+ G    + DL+ +    L A      +   +  +  ++   +  K++ V +   + + 
Sbjct: 562  VIGGDWSPE-DLEAKFQALLAAQNKALQEARQQQEQTRQKQARVDFKLKTVKETCEQKQT 620

Query: 522  D-VDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFER 580
            D ++ KK+ +++ L+++      I+ Y + + + +++ +  +   ++ D ++  +   +R
Sbjct: 621  DQIECKKKVLQA-LQNVRDSAV-IEDYTEEVSATEQQIETLRDDLSLIDALKDYYTKCKR 678

Query: 581  VARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES--SNADSYFQQLDKL 638
               A   C  C+R F  + +   + + RVK          +  E   S A S  Q L  +
Sbjct: 679  ALDAKKTCLLCDRHFD-DSQAASIDRLRVKIDRHLNSKTKIEAEQDLSEASSTLQSLVAV 737

Query: 639  RMVYEEYVKLSKETIPVAE--KNL---HELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
            R  Y+ Y +L KE   + +  K++   HE TE L ++  A      V+A  +  K  +  
Sbjct: 738  RSQYDTYERLGKELPGLRDERKSIEADHESTERLLEEHDA------VVAAEEDKKRDMND 791

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNL-QNE 752
            + + V    +  +EI+  + QV+ +     S G G R+ +EI  +L G++S +    +N 
Sbjct: 792  MSKTVSNITQTLREIKDSEGQVERIASQQQSVGTG-RSADEIH-DLQGTVSEQMRASKNR 849

Query: 753  LEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDE 812
            + KL ++++   + +S +++    LR    K + TL  + K ++ L  +   K +     
Sbjct: 850  VAKLSNDRQRARDQISTLELEKSELRN---KISLTLGQLDKKQDLLGQIQSLKEEQTHQR 906

Query: 813  KLLAEASGPLSKEKEKLLS--DYNDLKVKLNREYEEQ-AEQKINFQQEIEMLLKIASKIK 869
            + +  A   L K + ++       D  +K  R  E+   E + +    I  +  I S I+
Sbjct: 907  EAIQRADEELEKVEPRITEARSIRDETLKRGRAKEQVVTESRDSVATSINEIKMIESDIR 966

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
            +Y D          Q   +  E  + + +    E+    ++ K  + N D+ ++NI DNL
Sbjct: 967  DYEDRGGASNLASNQRAIATLEQNITTTETEISELTQRTNKLKQDIDNGDRTKKNINDNL 1026

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK-HLLER--DRLLSEVNRCQGTM 986
            NYR+    ++    EI  LE+R         +E   G+   LE   +RL +E     G+M
Sbjct: 1027 NYRKHLRMLETLRGEINELEDR----NAHEDYERLQGEARALENQSNRLFAERGSVMGSM 1082

Query: 987  SVYQTNISRNKIDLKQAQ--YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFH 1044
                 ++ R    LK+ +  YKD  +++ +  I+++TT+ A +DL +   A+DKA+M+FH
Sbjct: 1083 KTKDEDLDRL---LKEWEMDYKDAKQKYRESHIRVETTKAAIEDLAQCGAAVDKAVMQFH 1139

Query: 1045 TMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGR 1103
             MKM E+N+I  ELWQ TY+G DID I I SD+EG  G R+Y+Y++ M   DAE++MRGR
Sbjct: 1140 AMKMAEVNRIAGELWQSTYQGTDIDTILIRSDNEGTTGRRNYNYRLCMVKQDAEMDMRGR 1199

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+I+RLALAE+F +NCG++ALDEPTTNLD  N +SLA +LH I+  R+ Q 
Sbjct: 1200 CSAGQKVLASIIVRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHNIIRTRQAQS 1259

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NFQLIVITHDE F + +      + ++RV +DD Q+S+I  + I
Sbjct: 1260 NFQLIVITHDEDFLRHMRCSDFCDSFFRVKRDDKQNSVISRESI 1303


>gi|238504128|ref|XP_002383296.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357]
 gi|83764631|dbj|BAE54775.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220690767|gb|EED47116.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357]
          Length = 1326

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 358/1230 (29%), Positives = 611/1230 (49%), Gaps = 94/1230 (7%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 130  GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 189

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  K+ A +  +   + Q++ E L+ + Q+
Sbjct: 190  KYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQQEIETLREETQQ 249

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAA-----LAEEIE 192
            L   ++ +       EL  K  R+ +     +        E +  Q           E++
Sbjct: 250  LSLEMRRV------AELADKAWRESESYSQVLGTLEGKRIEAKSIQSTIDNLKRHLVELD 303

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK--IKFLEQNIDAYTAEITNLLSE 250
            D+DE L++    FE    + E    +  R++N M+ K  I+   Q +    AE     ++
Sbjct: 304  DSDEWLQSNLEQFESKQLQYEQ--QEEARKENYMEIKEQIERTRQKLGVKQAEYGKFEND 361

Query: 251  AGAHMSRMNERDSTIQKLFAR-HNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKK 309
              A+  R  ER   + K  AR +N+    N    N+    F+ ++R  L D  + L+  K
Sbjct: 362  K-ANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVD-EFMRKVRKLLKDQNQTLDRVK 419

Query: 310  KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLN 369
            +  +  L+    +  D       I  QK A  E K    + I   + E  +++ +++ +N
Sbjct: 420  REAQGELREVQTALND-------IAQQKSALQETKNAAKRQIAANDKESTTYQGKLNEIN 472

Query: 370  LSHIDER-ENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDS 428
               +DE  +  +   +E   + L + +          E+  ++ +I+ L  E   L  + 
Sbjct: 473  ---VDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKEIHDINSEIRGLEDESSRLNSEL 529

Query: 429  EDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKG----RLP--LDRDLKKE-ITQAL 481
             D  K A   A L++ KK+ K+     +++  + +KG    RL   + +D K + + Q  
Sbjct: 530  IDATKRAGDLARLDHLKKELKE-----RERSLETMKGAHGERLSKFVGQDWKPDTLEQEF 584

Query: 482  RALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQI 541
            + +L E    S +   A+ E + +  ++++V   L   +K +  +++ ++  +E + + I
Sbjct: 585  QHVLEEE---SKQVSRAENERDGVSRELEQVEFRLKNTKKVLGQRQKALKECIEEIREAI 641

Query: 542  FS-IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE 600
                + + +VL   + + D+ +       G+ +         +   VC  C R F ++ E
Sbjct: 642  NDEPEEFPEVLKQRQAQLDIARKDAEQYAGIGEYMATCLETVKQSKVCRLCHRGFKSDAE 701

Query: 601  --------DEFVKKQRVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKLSK 650
                    +  VKK   K  +  E +K L   LE++ + S           Y+ + +  +
Sbjct: 702  LQTFRNKLENLVKK--AKRDADDEDVKNLEEDLEAARSAS---------TSYDTWSRFQQ 750

Query: 651  ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQL 710
              IP  EK   +   + D+     +D   ++++    K  VE L + V T  R   EI+ 
Sbjct: 751  TEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEALAKTVNTIVRYDGEIKS 810

Query: 711  WQKQVDDLEYMLDSRGQ---GVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDL 767
             + Q+ DL     S+ Q     RT+E+IQ E++        L+  L KL  E+   + ++
Sbjct: 811  IRSQIQDL----SSKQQDTTSARTLEDIQEEIAAIGEKSRALKKSLSKLTHEKEQTQTEI 866

Query: 768  SNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP---LSK 824
            +N++++   LR+ K    N    +++  + L  + E K   +   + +A+A      L+ 
Sbjct: 867  NNLELQ---LRDVKSNLDNAKFQLERKSDLLARIEEYKNLNNQQREAIAKADRDIEDLTP 923

Query: 825  EKEKLLSDYNDLKVKLN-REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKEL 883
            E  K+ + Y+D+  +   RE E Q  Q I+   E    L++A++  + Y+    ER    
Sbjct: 924  ELLKVQAKYDDISQRAEAREREMQ--QTISQMSESVHQLELANEEIDAYN----ERGGPT 977

Query: 884  QEKKSQSESE-----VKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            Q ++S+ E E     +   +     I  E+++    +++ +  +R   DNL YR+    +
Sbjct: 978  QLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSENTKRQYADNLTYRQATRAL 1037

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
            D+   EIE L  +  ++   S F+ E  +   E + L ++     G M      + +   
Sbjct: 1038 DEVTQEIEQLAAQNAEVDR-SRFKDESERRTREHNALAAKQAGRMGEMKSKDDQLMQLLA 1096

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H +KMEEIN I+ EL
Sbjct: 1097 DWN-TDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIVGEL 1155

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIR
Sbjct: 1156 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIR 1215

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 1216 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQAQSNFQLIVITHDEEFL 1275

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1276 RYMQCGDFSDYYYRVSRNEKQKSIIERQSI 1305


>gi|353227488|emb|CCA77996.1| probable RAD50-DNA repair protein [Piriformospora indica DSM 11827]
          Length = 1235

 Score =  348 bits (894), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 348/1282 (27%), Positives = 626/1282 (48%), Gaps = 162/1282 (12%)

Query: 1    MEYKAIESVLQTINPHTGE----KVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEA 56
            M  K +E+VL  + P  GE    +  +S RCADMD E+P L+GVSKA+L+NVIF HQ+++
Sbjct: 39   MTMKTLEAVLTAL-PKEGEPEGKRHTISTRCADMDAEIPNLLGVSKAVLDNVIFCHQEDS 97

Query: 57   NWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK 116
             WPL +PS LKKKFD+IF A++YTKAL+ I+ + KD+  E     LKL+N + L+ AA  
Sbjct: 98   YWPLSEPSILKKKFDEIFEASKYTKALDAIRAIRKDRVVE-----LKLDN-ERLQAAA-- 149

Query: 117  LRESISQDQEKTEA--LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTAR-- 172
                    +EKT A  L+N++ +L  ++   D + +          ++ D+ S +  +  
Sbjct: 150  --------REKTHADKLRNRIADLNATVTAKDSEYN----------EVHDKASALAHQNK 191

Query: 173  ----RSTLFEQQQKQYAALAEE-----------------IEDTDEELKNWKNNFEGIVAK 211
                R+T F +  ++Y A  E+                 ++ TD EL+  + NF+  V  
Sbjct: 192  EFYERATQFREIYREYEAAQEKRAYLEKTLKEINENLEKLDGTDAELEERRANFDQEVQV 251

Query: 212  RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFAR 271
            R+    +  R+  D + ++K + + +      +  L +E  A+   +  RD+ +++L  +
Sbjct: 252  RKMTCDRKARDLRDEEERLKDVRRLLGEEQTRLGQLQAEKQAYNRNLTRRDNFVRELSGK 311

Query: 272  HNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWK 331
            + +    +        L+F    R+R+ DL R    + ++      M  +  +  N+  +
Sbjct: 312  YGIKGFDSDSLDQRQWLDF----RTRMDDLHRRTLSQFEA------MQAEGRVKDNEYNE 361

Query: 332  NIEAQKQAKMEIKA---GILKHIKEKENERDSFELQISNLNLSH------IDERENKMRI 382
            NI   +    +I+A    + K + E+++     E QI ++   +        E E KM+ 
Sbjct: 362  NIRKLQADIAKIQAERDSMAKLVNERQHAVKDAEAQIDSIQTKNSEFKGVTGEIEQKMK- 420

Query: 383  EVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELE 442
             ++    +L    ++  + QK + +  +++    LN E        E+R  L+L++ E +
Sbjct: 421  RIQTLQEELDASNYDAQLEQKSAAIHDLNRHYDRLNDELASSTLQMENRTTLSLRRDEAQ 480

Query: 443  NHKKKHKKIIDEYKDKIRDVLKGRLP----LDRDLKKEITQALRALLTEFDDLSSKSREA 498
             ++ + + I +    +    + GR P    ++RD+ + I++  R    E  DL  +   +
Sbjct: 481  KYELEIQTIFESISGRFHQAV-GRKPQVESIERDIDRSISEKER----EIKDLEVEVNGS 535

Query: 499  DKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKR 558
             + V     +I+     L   +K ++ + + ++ KL S+  +  S++    ++D+ ++  
Sbjct: 536  SRRV----AQIESTISTLKSRQKQLEDEAKTLDKKLTSIRGEHPSVNA--GLIDAQEQLN 589

Query: 559  DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAE 616
              Q       D  R  ++   +  R   +C  C RP + +E   F +     +K  SSA+
Sbjct: 590  LCQDEIAKHIDSSR-WYNEILKAGRTRKLCTSCNRPITDDEMAAFEQHVSNLLKKDSSAK 648

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYE---EYVKLSKETIPVAEKNLHELTEELDQK--- 670
              ++          +  +L ++++       + K+ K  IP   +   +L E L+     
Sbjct: 649  RAEL----EDELTQWQAELSRMQLALPLEVNWEKMKKTEIPKLIQEHTKLQETLNDAILE 704

Query: 671  ----SQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG 726
                ++  D     L  +++ K+ V  +V   +  D   Q       QV +LE  L + G
Sbjct: 705  ATACTERLDTAKLSLKTLQSLKQQVNNIVGATQRRDIALQ-------QVKNLEETLRA-G 756

Query: 727  QGVRTMEEIQLELS----GSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKV 782
              +++++EIQ ELS    G    +  LQ++ E+     R ++ +L  +QIR   LR E  
Sbjct: 757  ATMKSLDEIQAELSTIQQGIERERQMLQSDRERHSSSIRILQTELYQLQIRERELRTE-- 814

Query: 783  KAANTLRDVKKAEEELEHLMEE--KGQL---DLDEKLLAEASGP---LSKEKEKLLSDYN 834
                 +++ K+ EE      EE  K ++   DLD +L A A+ P   L +E+EK  S + 
Sbjct: 815  -----IQEGKRLEELTATYTEEIKKSRMKIKDLDAQL-ARANEPVDALVREQEKHHSLH- 867

Query: 835  DLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESE 893
              K ++N     +A++ I   + +++ L   A  I+EY   +     K  QE     E  
Sbjct: 868  --KARVN-----EAQEAIQAIKSDLDRLDLAAGTIEEYLRNQGPRNLKRCQEAVVDLEEA 920

Query: 894  VKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVL 953
            +++     + +  E+ R    V +       ++DNL  R         A EI  ++ R  
Sbjct: 921  IRTGIQDIEALRAEVGRLTKEVASSSLTASTLKDNLRAR-------ALAREIAQIDARTA 973

Query: 954  KIG------GVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKD 1007
             +           F+ +  +     D    +  R  G ++  +  ++  + D+++  YKD
Sbjct: 974  ALDLEEASRARQQFDEKYNRAKAAEDDAYRQSQRLVGELTSLRNQLTGLERDMRE--YKD 1031

Query: 1008 IDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD 1067
              +++ +QLI+ K  +M N DL++Y  ALD A+M++H++KM E+N  +R LW +TY+G D
Sbjct: 1032 ASRKYTEQLIKTKMADMVNNDLEKYAKALDSAIMKYHSVKMAEVNDTMRYLWNRTYQGTD 1091

Query: 1068 IDYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFC 1125
            ID I+I S+ EG G+   +Y+Y+V+M     E++MRGRCSAGQK+LAS+IIRLAL+++F 
Sbjct: 1092 IDGIKIISEGEGGGSGRRNYNYRVVMVKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFG 1151

Query: 1126 LNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQH 1185
             NCG+LALDEPT  LD  N E+LA +L  I+ +R+ Q NFQLI+ITHDE F + +G+   
Sbjct: 1152 ANCGVLALDEPTNALDVDNIEALAQSLVDIIRERRTQANFQLIIITHDENFLRKLGEASV 1211

Query: 1186 AEKYYRVAKDDHQHSIIEAQEI 1207
             + Y+RV++D  Q S +E   I
Sbjct: 1212 IDYYWRVSRDGRQKSTVEKNAI 1233


>gi|255726318|ref|XP_002548085.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240134009|gb|EER33564.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 1307

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 349/1251 (27%), Positives = 624/1251 (49%), Gaps = 116/1251 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K +E  L  I    GEK+ +S + +++D ++P  +G S AILENVIF HQD++ WPL
Sbjct: 113  VTFKTLEGQLAMI--EGGEKISISSKNSELDTQIPIYLGASPAILENVIFCHQDDSLWPL 170

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFDDIF A+++TK L+ +K + KD   +IK  +  + +L+  KD A K+++ 
Sbjct: 171  SEPSALKKKFDDIFEASKFTKVLDNLKIIKKDMTTDIKLIEQSVNHLKIDKDRAKKVQDR 230

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +++  E  +    ++ +L   I+  + +      T ++ +K       +  ++ TL EQ 
Sbjct: 231  LTELTESADTYTEEIADLNIQIERKEKEAEDLFATNQEFQKTLSDYENLLIKKQTLEEQI 290

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            ++   ++ E + D+D+EL N + NF  I  ++   I  L+ + + M+ K+K   +N +  
Sbjct: 291  ERTKRSI-EILPDSDQELMNKQENFAAITEEKSRTIEDLQTKSSRMNEKLKDRTKNYN-- 347

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSD 300
                 +L+   G+   +  E +  ++++    N        + +   ++     +S ++ 
Sbjct: 348  -----DLIRLDGSLKGKKVEYEQNLEEISQIMN-------DYGDSLGVSLSEDTQSNITK 395

Query: 301  LERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKEN--ER 358
             + +LE   K    A+       L  N R   IEA+KQ++++    +L  I  +E   E 
Sbjct: 396  FKGELEKAHK----AILSEQKRLLTDNKR---IEAEKQSELQ---DVLNAISREEQHFEY 445

Query: 359  DSFELQISNLNL----SHIDEREN------KMRIEVERKTNQLAE-------REFEINIR 401
             + +++ +N  L      +D   N      + RIE++    QL E       +EF+  I 
Sbjct: 446  ATNDMETNNQKLLVLRRKVDAGSNDETELIEKRIELDSTNKQLQEKRDLNEVKEFDNKIM 505

Query: 402  QKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRD 461
            +  SE+  ++  +  L ++       SE R K+   +  +++   +  +II    D  ++
Sbjct: 506  ETNSEISKLEFSLDELAKKVSTSNKQSELRSKVTFLEDSVKSKNAEISRIISVITDNYQE 565

Query: 462  VLKGRLPLDRDLKKEITQALRALLTEFDDLSSK--SREADKEVNMLQMKIQEVTDNLSKH 519
            V+  +L +D      + Q +  L  + +D   K  S E++ E+N      ++  +++ K+
Sbjct: 566  VVGSKLDIDVG-DSLLNQKISHLQIKHEDQQKKVMSLESELEIN------KKTLESILKN 618

Query: 520  RKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFE 579
             KD  +K   +++ + ++ ++    +    V +  +  RDV +   N A+  +       
Sbjct: 619  AKDNSAKLESLKAAITTVIEEDEIDEYESIVQELEENYRDVSED-VNTAEVTKDFKGSAI 677

Query: 580  RVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
            ++A     C  C+R F     D F+K  KQ V   S  + +K  ++E  N       LD 
Sbjct: 678  QMAEKSKCCLLCKRLFEEGGLDVFIKDLKQSVD-ESKIQEIKSRAVEIKN------DLDS 730

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLG-VLAQIKADKESVEV--- 693
            ++ V  + +   +    V+E  L    ++L   S + D  L      +KA K+ ++    
Sbjct: 731  VKSVNLKILNYRECLANVSE--LESKIKDLRSNSYSIDKELTEATKDMKATKDLLDAALS 788

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS-LSTKDNLQNE 752
            L +P+  A R+  E+Q    Q+D+L   L   G  V ++ E+Q +   + +  KD  QN 
Sbjct: 789  LKKPLSDATRINLEVQDIDIQIDELNEDLTGFGSNVASVGELQKQQQDTNIKLKDMRQNL 848

Query: 753  LE------KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG 806
             E      K++ E + +EN + +I+++   L        N   ++ + E+ +  L     
Sbjct: 849  NEWTESKYKVQREVQRLENRVKDIKLQISNLERSLADVTNIKDNINETEKVIAKL----- 903

Query: 807  QLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR------EYEEQAEQKINFQQEIEM 860
                 E  L E    L    EKL SD    +  L +      E EE+ ++K+   Q+I+ 
Sbjct: 904  -----EDRLKEIKDSL----EKLRSDKETKERALKKAQDEIQESEERIQKKV---QDIQD 951

Query: 861  LLKIASKIKE---YYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRN 917
            L    S + E   YY     ++ +E   K  Q   E +S  ++ +E    +   +  V +
Sbjct: 952  LYSSFSSLNESISYYQAHIAKKLEENTSKMQQVSHECESLTLKIEEYTGSIKSLEKEVMD 1011

Query: 918  QDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETEL---GKHLLERDR 974
              ++  NI  N++YR   +++D+   ++ S++     I    T + E     + L E   
Sbjct: 1012 ASRVEHNILANIDYRGQLSRLDEAELQLNSMD-----IENAQTRKDEYQEKSRQLREAIS 1066

Query: 975  LLSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
             L+  +  + G +   +  IS  K +L + +YK++++ + ++ I+L+T  + + DL  Y 
Sbjct: 1067 SLTADHAGKIGEVKQIKDQISGLKKEL-ETEYKNVNQNYHEEWIKLQTNLLVSNDLQNYS 1125

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYSYKVLM 1091
             ALD A+M++H++KMEEIN+I+ ELW QTYRG DI  I I SD   +  G RSY+Y+V+M
Sbjct: 1126 KALDNAIMKYHSIKMEEINRILTELWSQTYRGSDIATIAIKSDVNLQAKGNRSYNYRVVM 1185

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
                +EL+MRGRCSAGQKVLAS++IRLALAE F  NCG++ALDEPTTNLD  N+E+LAAA
Sbjct: 1186 IKDTSELDMRGRCSAGQKVLASILIRLALAECFGANCGMIALDEPTTNLDAENSEALAAA 1245

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            L +I+E RK Q NFQLIVITHD++F   +   +  + +YR+ +D+   S I
Sbjct: 1246 LTKIIEYRKAQANFQLIVITHDQKFLTHMQADRFTDHFYRIQRDETSKSRI 1296


>gi|301123681|ref|XP_002909567.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4]
 gi|262100329|gb|EEY58381.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4]
          Length = 1280

 Score =  346 bits (887), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 341/1238 (27%), Positives = 607/1238 (49%), Gaps = 158/1238 (12%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +KA++ V+Q  N   GEKV L+++C ++D+ +P ++GVSKAILE+VIF HQ+++NWPL
Sbjct: 108  ISFKALDGVIQVAN-ELGEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPL 166

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            ++ + LKK+FD+IF + RYTKALE I+KL K +    K YK  L+ L      A ++R+ 
Sbjct: 167  REGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTAHMKTAEEIRDK 226

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTM---TARR---- 173
            I + QE+       +QE+ +  ++ D KI   + TL++L+++Q+++ +      RR    
Sbjct: 227  IERMQER-------LQEVAEEGEEADGKIARADETLRELQQLQEEVKSFHLQLERRQEDV 279

Query: 174  STLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFL 233
            +T  +  +  Y  + + + DTDEEL++  NN++  +    S  ++L+ +K  +  +    
Sbjct: 280  ATKEQSARSAYNKIEKIMSDTDEELQSCLNNYDATIENHRSAFARLQEQKEKLQREQHKT 339

Query: 234  EQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINR 293
             +   A   E T + +  G +   + +   T  KL  ++     P      E   +F+  
Sbjct: 340  NEEYVALRNEKTRVETNIGMYQKMVADLIDTASKLSTKYRFHLQP-LTSQQEDIWSFLAE 398

Query: 294  IRSRLSDLERD---LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKH 350
             RS + D + +   L+ K++ ++ AL            R ++    K   +E     L  
Sbjct: 399  FRSVVKDKQEEVNKLDAKQRQEDDALMTELSELTSQAKRLQDDLKSKTQSLE----ALNR 454

Query: 351  IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
             K+   +R      +  L  + +  + +      E  ++Q++E E  +   + +  + A+
Sbjct: 455  DKQVVADR------LRALGGAGLHSQRD-----AEEMSSQVSEAEKTLADYRAKHNVAAL 503

Query: 411  DQKIKALNREKDVLAGDSED--------RVKLALKKAELENHKKKHKKIIDEY----KDK 458
              +I+  NR+   + G  ED        R+  A + AE E  + +++K ++ +    ++K
Sbjct: 504  KDEIQGFNRQMSGINGVVEDLGQEISQLRI-YATRNAETEFQRSEYRKKLESFQANLQEK 562

Query: 459  IRDVLK----GRLPLDRDLKKEITQALRALLTEFDDL-SSKSREAD---KEVNMLQMKIQ 510
            + D+ +    G  P DR        +L + +   DDL   + R  D   KE    + ++ 
Sbjct: 563  VADIEEIFEGGEKPTDR-------ASLVSGIRYVDDLIGERKRSLDTKRKEQASAEQRLI 615

Query: 511  EVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADG 570
            E T +     K++++  R  +++LE  +     +   +++LD      D++ ++  + + 
Sbjct: 616  ENTTSSKLAEKELNA-LRLKKNQLERQH-----VSGLKELLDRVIPGHDLKSAELGVREA 669

Query: 571  MRQMFDPFERVAR----------------AHHVCPCCERPFSAEEEDEF--VKKQRVKAA 612
             R   D  ++V R                  H CP CER  S EEE  F  V   +    
Sbjct: 670  ERAYADAKDKVVRRKNMVLFLNIYKKKGLKDHCCPLCERDMSPEEEQAFESVLSDKTDDG 729

Query: 613  SSAEHM-KVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
              A+ + K   LE S+     Q L +L           KE +P   K +     EL+   
Sbjct: 730  KVADKIKKAEDLEKSS----LQTLTEL-----------KEKMPSWRKWI-----ELE--- 766

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQE-----------IQLWQKQVDDLEY 720
             A  + +  L +I A ++++E+ VQ  + A  L QE           +++ +K  D+LEY
Sbjct: 767  TAIPEKVSELEEIYAAQKALEIDVQDKKAAFELAQEHFDAARVAKSDMEILRKSADELEY 826

Query: 721  -----------MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSN 769
                       M  S+G   R++ +++ E     +    L ++L++ + E   +   L  
Sbjct: 827  SDVEITKKEARMRGSQGASGRSLADVEAEKDAKQAKVQELNHQLQRKQKELDRINEMLQQ 886

Query: 770  IQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSK---EK 826
            +Q   H+ +EEK++       ++   +E +  ++E+ +L   EK L EA   L K   E 
Sbjct: 887  LQNDVHSRKEEKLR-------LETQRKEYDEAVKEQNRLREQEKALKEACAKLKKSEPEV 939

Query: 827  EKLLSDYNDLKVKLNREYEEQAE-QKINFQQEIEMLLKIASKIK--EYYDLRKDER-FKE 882
             +++      +    +E  EQ   Q+   QQ        + K K  ++ +L K ER  + 
Sbjct: 940  GRVVRAKATQRQTRRKEASEQLHVQRSELQQRQGDFRVFSDKCKQVQHGELDKLERQVQA 999

Query: 883  LQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFA 942
            L +  +Q++    +      ++  ++   +  +   +  +R I+DN++YRE + +++K  
Sbjct: 1000 LSDTIAQTKQREDTAVQALADLAPQMQSAQTNLSQNEVGKRQIQDNIDYRELQKQLEKMR 1059

Query: 943  SEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN----ISRNKI 998
            +E+  L+     IG + + + ++   +   D  LS        M   +      +   K+
Sbjct: 1060 TEVADLQNH---IGNLPSLD-DVNDRVESADAALSSAKHSASVMVGKRQQLLEELREQKV 1115

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
             L+    KD+++++  +LIQ +TT+MA  DLDRY+ ALD++L+++H+ K+EEIN IIR L
Sbjct: 1116 KLRVPTLKDVEEKYRHKLIQFETTQMAVTDLDRYFKALDESLLQYHSKKVEEINTIIRSL 1175

Query: 1059 WQQTYRGQDIDYIRIHSDSE-GA---GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
            WQ TY+GQDID I + S  + GA     RSY Y+V+M+   A ++MRGRCSAGQKVLA+L
Sbjct: 1176 WQITYKGQDIDTIELVSGQQDGAVSKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAAL 1235

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
            +IRLALAETFCLNCGILALDEPTTNLD  N   LA A+
Sbjct: 1236 VIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAI 1273


>gi|342890233|gb|EGU89081.1| hypothetical protein FOXB_00354 [Fusarium oxysporum Fo5176]
          Length = 1311

 Score =  345 bits (885), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 344/1256 (27%), Positives = 621/1256 (49%), Gaps = 114/1256 (9%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 114  KTLDCSLVVVN--NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 171

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K Q +++     KL+N     +A  K+ +    
Sbjct: 172  AALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLG----KLQN----DEAHNKVNKDRGD 223

Query: 124  DQEK-TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              EK  +AL+ +++   ++ + I  ++  T+  ++++R+  +    +    +T  EQ + 
Sbjct: 224  RAEKRMKALQAEIEGSRETCESISSEMEETQDKIRNIRETANSHLAIVQNLNTKREQLEY 283

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            +  A+ +E++ T +EL +     EG +A  E  +  L+ E +    +   L+  +     
Sbjct: 284  REEAV-KELKATIDELPDDDGKLEGDLAHYEDRMQHLQDEADQNKAQYNELQTELGKSRK 342

Query: 243  EITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIR 295
            E++  LSE G H S       ++  R  TIQ+    +      +   S+    +F +R++
Sbjct: 343  ELSAKLSEQGKHQSDKDKYERQLKIRMETIQEAAQSYGFSGF-DGDLSDHHVKSFNDRLQ 401

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG-ILKHIKEK 354
              LS+ +RDLE  +K +   L  A     +   R K    Q +   + + G I K     
Sbjct: 402  KLLSEKKRDLERLQKENSAELDRATGVITELEGR-KAARTQDRVSAKQRMGAIEKRTSVL 460

Query: 355  ENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKI 414
            +NE  S ++ +     + +D +   + I  +         +++  I  +  +L  ++ + 
Sbjct: 461  QNE--SSQIDVDEGAKAVLDGQMQDLEIRFQTAQKTFENADWDRQISDENDKLHQLENEN 518

Query: 415  KALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
              L RE       + +R +L  +K EL + K+K   +   +K K+  +L        D +
Sbjct: 519  DKLGRELVECTRLASERAQLDYRKKELGDRKRKLDTLTSTWKPKLDKILGS------DWQ 572

Query: 475  KE-ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESK 533
             E +    +AL+    D S    EA K    ++ K Q+V   L   ++  + K +    +
Sbjct: 573  PETLDSKFQALVK---DQSKIVSEAQKRREQIRQKQQKVDFKLRTSKESHEKKSK----E 625

Query: 534  LESLNQQIF----------SIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVAR 583
              +  QQ+           +++ Y++ ++  + + +  ++  ++ D +   +   +R+  
Sbjct: 626  AATCQQQVVNALLAVRDNATVEDYKEEIEVTESQVEELRNDLSLFDALVDYYTKCKRLLD 685

Query: 584  AHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD--SYFQQLDKLRMV 641
                C  C+R F   ++++    +R+ +    +H+       +  D       L+KLR V
Sbjct: 686  TKRKCLLCDRHF---DDNQAASMERL-SKRIDKHLDPKGKVDTEKDLKDTVANLEKLRSV 741

Query: 642  ---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
               Y+ Y +L+ E +P   +       E D   +  ++   V++  +  ++ +E + + V
Sbjct: 742  RGSYDTYERLTAE-LPSLREECKVAEAEFDALERQVEEQGSVVSAEEEKQKDLEDMSKTV 800

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGV-RTMEEIQLELSGSLSTK-DNLQNELEKL 756
             +  +  ++I   + QVD +  M      GV R+ +EI  EL   LS +  NL+N + KL
Sbjct: 801  LSIAQTVKDIAESENQVDRI--MSQQMSGGVTRSPDEIH-ELQAGLSDQMRNLKNRIVKL 857

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG---------- 806
              +++  ++ L+++++    LR +  +AA  L   +  + +++ L EE            
Sbjct: 858  TTDRQRTKDQLNSLELEKSELRNKISRAAGQLDKKQDLQNQIQALKEEASHQRDVIQRAD 917

Query: 807  -QLDLDEKLLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIE 859
             +L+  E  + EA           + KE++++D  D                 N   E++
Sbjct: 918  EELETIEPSITEARSARDEVLRRGRAKEQVIADARDAVA--------------NSVNEMK 963

Query: 860  MLLKIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
            M+    + I++Y D      L  +ER    L++  + +E EV    +RT+++  ++D   
Sbjct: 964  MM---DADIQDYIDRGGPSNLASNERSIATLEKTITSTEKEVTDLTVRTNKLKQDID--- 1017

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER 972
                N D+ ++NI+DNLNYR+    +D    EI  LE+R          + E        
Sbjct: 1018 ----NGDRKKKNIKDNLNYRKNLRTIDVIRQEIAELEDRNAD-EDYERLQAEARMQENHY 1072

Query: 973  DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
            +RLL+E     G+M      + R  +   +  YKD  +++ +  I+++TT+ A +DL + 
Sbjct: 1073 NRLLAERGSVMGSMKTKDEELGR-LLQEWEMDYKDAKRKYRESHIRVETTKAAIEDLAQC 1131

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG-AGTRSYSYKVLM 1091
             +A+DKA+M+FH+MKM E+N+I  ELWQ TY+G DID I I SD+E   G R+Y+Y++ M
Sbjct: 1132 SSAVDKAVMQFHSMKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESNTGKRNYNYRLCM 1191

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
               D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +
Sbjct: 1192 VKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAES 1251

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +D+ Q+S+I  + I
Sbjct: 1252 LHMIIKARQAQSNFQLIVITHDEDFLRHMRCSDFCDSFFRVKRDERQNSVISRESI 1307


>gi|408400423|gb|EKJ79504.1| hypothetical protein FPSE_00323 [Fusarium pseudograminearum CS3096]
          Length = 1307

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 342/1256 (27%), Positives = 615/1256 (48%), Gaps = 114/1256 (9%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++S L  +N   GE+   S R A MD  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDSSLVVVN--NGERTTTSTRQAQMDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K Q +++     KL+N     +A  K+ +    
Sbjct: 168  AALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLG----KLQN----DEAHNKVNKDRGD 219

Query: 124  DQEK-TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              EK  +AL+ +++   ++ + I  ++  T+  ++  R+  +    +     T  EQ + 
Sbjct: 220  RAEKRMKALQAEIEGSRETCESISAEMEETQEKIRTTRETANSHLAIVQNLDTKREQLEY 279

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            +  A+ +E++ T EEL +     E  +A  E  +  L+ + +    +   L++ +     
Sbjct: 280  REEAV-KELKSTIEELHDDDGKLESDLAHYEDRMQHLQDDADQNKAQYNELQKELGQSRK 338

Query: 243  EITNLLSEAGAHMSRMN--ERDSTIQKLFARHNLGSLPNAPFSNE----AALNFINRIRS 296
            E++  LSE G H S  +  ER   IQK   +    S   + F  +       +F +R++ 
Sbjct: 339  ELSAKLSEQGKHQSDKDKYERQLKIQKEMIQEAAQSYGFSGFDGDLPDSQVKSFNDRLQK 398

Query: 297  RLSDLERDLE--DKKKSDELALKMAWDSYLDANDRWKN---IEA-QKQAKMEIKAGILKH 350
             L++ +R+LE   K+ S EL       + L+     +    + A Q+ + +E +  +L++
Sbjct: 399  LLAEKKRELERLQKENSSELDQATGVITELEGRKAARTQDRVSAKQRMSAIEKRTAVLQN 458

Query: 351  ----IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSE 406
                I   E  +   + Q+ +L+           R +  +KT + A+  ++  +  +  +
Sbjct: 459  ESSQIDVDEGAKAVLDGQMQDLD----------SRFKTAQKTFENAD--WDRQLSDENDK 506

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
            L +++     L RE       + +R +L  ++ EL + K+K   +   +K K+  VL   
Sbjct: 507  LHSLESDNDRLGRELVECTRLASERAQLDYRRKELNDRKRKLDTLTSTWKPKLDKVLGS- 565

Query: 467  LPLDRDLKKEITQA-LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
                 D + +  ++  +AL+   + + S   EA K  +  + K Q+V   L   ++  D 
Sbjct: 566  -----DWEPQTLESKFQALVKNQNKVVS---EAQKRRDQTRQKQQKVDFRLRTTKESRDK 617

Query: 526  KKRFIESKLESLNQQIFS----------IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMF 575
            K +    +  +  QQ+ +          +D Y++ +++A+ + +  ++  ++ D +   +
Sbjct: 618  KAK----EAATCQQQVVNALLTVRDNAIVDDYKEEVEAAESQVEELRNDLSLFDALVDYY 673

Query: 576  DPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD-----S 630
               +R+      C  C+R F   +E +    +R+ +    +H+       +  D     S
Sbjct: 674  TKCKRLLDTKRKCLLCDRHF---DESQAAGMERL-SKRIDKHLDPKGKVDTEKDLKEMVS 729

Query: 631  YFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
              ++L   R  Y+ Y +L+ E +P   +       E D   +  ++   +++  +  ++ 
Sbjct: 730  SLEKLRSARGSYDTYERLTAE-LPSLREECKTTEAEFDALERQVEEQASIVSTEEEKQKD 788

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNL 749
            +E + + V    +  ++I   + QVD +     S G   R+ +EI  EL  SLS +   L
Sbjct: 789  LEDMSKTVANITQTIRDIAESETQVDRIMSQQMS-GGATRSPDEIH-ELQASLSDQMRTL 846

Query: 750  QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG--- 806
            +N + KL  +++  ++ L+++++    LR +  +AA  L   +  + +++ L EE     
Sbjct: 847  KNRISKLTTDRQRTKDQLNSLELEKSELRNKISRAAGQLDKKQDLQNQIQALKEEVSHQR 906

Query: 807  --------QLDLDEKLLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEEQAEQKI 852
                    +L+  E  + EA           + KE+++ D  D                 
Sbjct: 907  DVIQRADDELETIEPSITEARSARDEVLRHGRAKEQVIVDARD----------------- 949

Query: 853  NFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
            N    +  +  + + I+ Y D          Q   +  E  + S +    ++ V  ++ K
Sbjct: 950  NVANSVNEMKMMDADIQGYIDRGGPSNLASNQRAIATLEKTIASTEKEVTDLTVRTNKLK 1009

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER 972
              + N D+ ++NI+DNLNYR+    +D    EI  LEER          + E        
Sbjct: 1010 QDIDNGDRKKKNIKDNLNYRKNLRTIDVIRQEIAELEERNAD-EDYERLQAEARMQENHY 1068

Query: 973  DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
            +RLL+E     GTM      + R  +   +  YKD  K++ +  I+++TT+ A +DL + 
Sbjct: 1069 NRLLAERGSVMGTMKTKDEELGR-LLQEWEMDYKDAKKKYRESHIRVETTKAAIEDLAQC 1127

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG-AGTRSYSYKVLM 1091
             +A+DKA+M+FH+MKM EIN+I  ELWQ TY+G DID I I SD+E   G R+Y+Y++ M
Sbjct: 1128 SSAVDKAVMQFHSMKMAEINRIAGELWQSTYQGTDIDTILIRSDNESNTGKRNYNYRLCM 1187

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
               D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +
Sbjct: 1188 VKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAES 1247

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +D+ Q+S+I  + I
Sbjct: 1248 LHMIIKARQAQSNFQLIVITHDEDFLRHMRCSDFCDSFFRVRRDERQNSVISRESI 1303


>gi|294656912|ref|XP_002770330.1| DEHA2D17314p [Debaryomyces hansenii CBS767]
 gi|199431834|emb|CAR65684.1| DEHA2D17314p [Debaryomyces hansenii CBS767]
          Length = 1309

 Score =  343 bits (881), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 354/1257 (28%), Positives = 615/1257 (48%), Gaps = 147/1257 (11%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G K  +S + A++D  +P  +G S+AIL+ VIF HQD++ WPL + S LKK+FDDIF A+
Sbjct: 127  GTKTTISTKNAELDTSIPIYLGASRAILDYVIFCHQDDSLWPLSEASVLKKRFDDIFEAS 186

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            ++TK L+ +K + KD   +IK  +  + +L+  K  A K+ E ++   +K +    ++  
Sbjct: 187  KFTKVLDNLKTIKKDMTTDIKLIEQSVHHLKIDKSRAKKINEKVNDLNQKVDTYTEEIAT 246

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
            +   I++ + +     L+ +   +   +I  +   + +  EQ  +   ++ + + D+DEE
Sbjct: 247  ITMDIEEKEKEAEALFLSNQQFHETLSKIEHLNFIQKSYKEQIDRLNKSIYK-LPDSDEE 305

Query: 198  LKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSR 257
            L+   NN+E I  ++ S I +L    ND + K   L +N+     E   ++   G+  S+
Sbjct: 306  LREQLNNYENITNEKASQIKRL----NDENVK---LHENLKDKRNEFNQIIRLEGSLKSK 358

Query: 258  MNERDSTIQKLFARHNLGSLPNAPFSNEAALN----------------FINRIRSRLSDL 301
                     + F + N+ +L N    ++   +                F   I  +L DL
Sbjct: 359  ---------EEFYKENVINLSNLVLKSQDYFDLSYTDVDLKDDDKIEEFKETIEKKLQDL 409

Query: 302  ERD---LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENER 358
            + D   L +K   DE  L+ A     ++  R K  + Q     +I+ G  K I E + + 
Sbjct: 410  KSDYNTLVNKHSEDESLLESAVQEVTNSIAREK--QHQDYCNDDIERG-RKKINEFKKKM 466

Query: 359  DSFELQISNLNLSHIDERENKMRIEVERKTNQLAER------EFEINIRQKQSELFAMDQ 412
            D  +    +L +    E E+ +    E+K+   + R       +  ++   + EL  +++
Sbjct: 467  DHLQYNEGDLEIER-SELESLLSRYEEKKSQSDSSRYESKVDSYNGDLLTLEHELEELNK 525

Query: 413  KIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRD 472
            KI A N++ DV A       KL+L    + +  K   KII   +    +  +  LPL  +
Sbjct: 526  KISASNKQSDVHA-------KLSLLNEAIMHKSKALLKIISSNEKLFSE--RTTLPLKAE 576

Query: 473  LKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIES 532
              +EI       LT++  +SS S E +KE  ++  K ++  D+L+          +  E 
Sbjct: 577  TCEEI-------LTKY--ISSNSDEVEKEQVVVSTKSKKF-DSLNALLDSNSETMKSYEE 626

Query: 533  KLESLNQQIFS------IDTYQKVLDSAKEK-RDVQKSKYNIADGMRQMFDPFERVARAH 585
            ++    ++I        ID Y+++L+  +E  RD  ++  N  +  RQ       +A+  
Sbjct: 627  RIGKYKERILKEITEDEIDQYEQILEDLEEDFRDTSEA-LNTFEVSRQFKIKAIEIAKKD 685

Query: 586  HVCPCCERPFSAEEEDEFV-------KKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
              C  C R F +     FV       KK  V+  +    +    LES+ A         +
Sbjct: 686  EHCTLCLRSFDSPGLKNFVSLLQDDVKKMNVEELTKNVEIAKKELESTKA---------I 736

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
                 +Y KLS E   +        ++ L+ K + F+  L  L  +K++ +++  L  P+
Sbjct: 737  NSDVLQYRKLSSEVTDLKSHIDKTKSDTLNAK-EDFETGLNRLGNLKSNMDALNSLKNPI 795

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ-LELSGSLSTKD-NLQ-NELEK 755
                R+  +I    +Q++ L+  L   G     ++E+Q L+ S ++  KD  +Q NE+ +
Sbjct: 796  YDIVRIKNDINDSNRQIEALKDELSEYGVSKTPLDELQQLQQSKNMEIKDLRIQINEINE 855

Query: 756  LR----DEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD 811
            L+     E   +EN++ + Q+               + +++++  +L++L E    +D +
Sbjct: 856  LKFTKQKELARLENNIKDKQL--------------AISNMERSFVDLKNLRE---SIDEN 898

Query: 812  EKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEE-----QAEQKINFQQ--EIEMLLKI 864
            EK + E +   S + + +L +++D   K N   EE      + +KI  ++   ++ + KI
Sbjct: 899  EKHINELNKK-STDIKNVLDEFHD---KQNVHQEELRKTKDSNKKIREKEVSNVDKIEKI 954

Query: 865  ASKIKEYYDLRKD------ERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQ 918
             S     Y+  K        + KE++ K  ++ES  K  +I   E    + R +  +   
Sbjct: 955  VSNFLSLYNATKSFLKIELPKLKEVETKIRETESVTKGVEIEISESESHIKRLEKSINES 1014

Query: 919  DQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE------LGKHLLER 972
               + NI DNL YR  + +++   +++ SL+    +       ET       L K   + 
Sbjct: 1015 SNFKSNIRDNLEYRNVQKELEGIDNQVHSLDISNAQAKKDEYQETSKNLRNILTKLNADY 1074

Query: 973  DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
               + EV + +  +S  Q  +S         +YK+ID+ + ++ I+L+T  + + D+  Y
Sbjct: 1075 AGKVGEVRQMKDQISSLQNELSN--------EYKNIDRTYHEEWIKLQTNMLVSNDIQTY 1126

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYSYKVL 1090
              ALD A+M++H+MKME+IN+I+ ELW+QTY+G D+D I I SD   +  G RSY+Y+V+
Sbjct: 1127 SKALDNAIMKYHSMKMEDINRILGELWRQTYKGTDVDTISIKSDVNVQAKGNRSYNYRVV 1186

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M   D+EL+MRGRCSAGQKVL S++IRLALAE F  NCGI+ALDEPTTNLD  N ESLA 
Sbjct: 1187 MYKQDSELDMRGRCSAGQKVLTSILIRLALAECFGANCGIIALDEPTTNLDSENTESLAQ 1246

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            AL++I+E RK Q+NFQLIVITHDE+F   I      + +YRV +D+HQ SII +  I
Sbjct: 1247 ALNKIIEFRKNQKNFQLIVITHDEKFLSHINGDNFTDHFYRVQRDEHQKSIIRSLPI 1303


>gi|406606394|emb|CCH42168.1| DNA repair protein [Wickerhamomyces ciferrii]
          Length = 1256

 Score =  342 bits (878), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 327/1228 (26%), Positives = 618/1228 (50%), Gaps = 78/1228 (6%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E   Q +  H GE+  +S +CA++D +VP  +GVSKAIL+ VIF HQDE+ WPL +
Sbjct: 71   FKTLEG--QLLALHRGERTTISTKCAELDAQVPTYLGVSKAILDYVIFCHQDESLWPLAE 128

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LKK+FD+IF A ++TKAL+ IK + KD A EIK     +++L+T K+ A +++E IS
Sbjct: 129  PSVLKKRFDEIFEALKFTKALDNIKVIRKDMAVEIKLLDQSVKHLKTDKERADRVKEKIS 188

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
               ++ E  + +   LE+ +Q I  + +    + ++ +K+  ++ +    + +L EQ  +
Sbjct: 189  VSNKQIEDYREETALLEEDLQRIAKESNELFKSNQEFQKVLSKLESYKHSQRSLNEQISR 248

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
               +    + ++DE+++    NF+ +V + +S ++ L+ E +D  + +K L Q+      
Sbjct: 249  LEDS-TRLLPESDEDIQYKLANFQSMVQEAQSKVNDLKYEVSDKQSNLKTLRQDYSHMIR 307

Query: 243  EITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLE 302
            E   L  +   +   +  R++ +  + ++  + S      S+    +F + + S + + E
Sbjct: 308  EEGQLKGKEAEYQENLQRRETLVNSIASKLGIDS------SSGDVQSFESELTSLVDNSE 361

Query: 303  RDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFE 362
            R LE         +K A  +  D + + K +   K  + + +   L  I+  E E  +  
Sbjct: 362  RSLES-------LVKTAKRAEADLSQKLKLVSDSKLKERQHRDYTLSDIEAHEKEIKAQN 414

Query: 363  LQISNLNLSHIDERENKMRIE-VERKTNQL-AEREFE---INIRQKQSELFAMDQKIKAL 417
             +I++L+++       K ++E +E K N+L  E+  E    +I+ K +E+  ++ +++ +
Sbjct: 415  NKINDLDVNEGGLEYEKTKLEDLETKLNKLKGEKVVENLLKDIKTKNTEISNLEIELENI 474

Query: 418  NREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEI 477
              E       ++   K++L K E    +K   K+I+   +  +        LD+  + ++
Sbjct: 475  GNELSQSHKQADAHAKISLLKDEKRYREKALAKLIETNNEIFQKEQLNIEDLDKSYRAKV 534

Query: 478  TQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESL 537
             +A           +++++  + +++ LQ +  ++    S  +  + + ++ +ES L+  
Sbjct: 535  NKA-----------TAEAKRGEIDLSKLQDQFSKLESEASFKKTTISNYEKELESSLQKY 583

Query: 538  NQQI-FSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFS 596
            N ++ F ID Y   L  A+++  +      +     +       +A + H C  C R F 
Sbjct: 584  NDEVEFGIDDYDDELGDAEKQYKLALENLKVTKTTLEFNKKALEIAESDHSCFLCSRKFD 643

Query: 597  AEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPV 655
             +     F+K  + K    AE  K    +      Y   L  L  + +  VK  K+ +  
Sbjct: 644  DKPGLTNFLKALKEKTNGDAE--KSFQEDVVETKEYLDSLRSLSQIVDR-VKTLKDKVKT 700

Query: 656  AEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQV 715
             E  + +      +    F        + K   ES+  +   V    R+  ++     Q+
Sbjct: 701  LESEVAKSEPGYKKVESEFTTQKAKADEAKHKLESLNDIKNAVSEITRMKHDLSNVSSQL 760

Query: 716  DDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWH 775
             D E  L+  G   ++++E+Q E     +T   L+ E+  L +E+   + ++S   I   
Sbjct: 761  SDKEKELNDYGYSAKSLDELQKEQKEKHTTLKILRTEVNTLLEEKDSKQREVS---ILEG 817

Query: 776  TLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYND 835
             ++++++  +   R + + E  L+ + E K ++   ++  A+++G L + +E++    ++
Sbjct: 818  NVKDKRLAISIIERGLVEKENLLKSIEEYKNKIVKLQEQAAKSNGILEELEEQVNQASSE 877

Query: 836  LKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERF------KELQEKKSQ 889
            L  K       Q E +++ + +   + K     KE+ +L     +      K+L   K Q
Sbjct: 878  LSAK-------QRENEVSIKNQQNEVSKFKDHQKEFSNLNGSITYYVDVDSKKLA--KCQ 928

Query: 890  SESEVKSCKI--RTDEILVELDRFKD---IVRNQDQIRRNIEDNLNYRETKAKVDKFASE 944
             E  + S  I    +EI   L R  D    + +     RN+++NL+ R  + ++D    +
Sbjct: 929  EEVSLISTLIAEHEEEIESTLARVSDEEKKLADTSSEERNLKNNLDIRHMQKQLDNIEHD 988

Query: 945  IESLEERVLKIGGVSTFETELGKHLLERDRLLSE-VNRCQGTMSVYQTNISRNKIDLKQ- 1002
            IESL+            E+E  ++  ER  +L E  ++    ++     + + +  +KQ 
Sbjct: 989  IESLD--------AQNAESERDRYE-ERSAVLREQYSKMNADLAGKMGEVKQIEDQVKQF 1039

Query: 1003 -----AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
                  ++K +++ + ++ ++L+T  + + DL+ Y  ALD A+M++H++KM+EIN+ I E
Sbjct: 1040 EKELRTEFKQVEQAYQEEWVKLQTKTLVSNDLNTYSKALDSAIMQYHSIKMKEINRTIDE 1099

Query: 1058 LWQQTYRGQDIDYIRIHSDSEGA--GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLI 1115
            LW+ TY G D+D I I SD   A  G R+Y+Y+V+M   DAEL+MRGRCSAGQKVLAS+I
Sbjct: 1100 LWKGTYSGTDVDTIMIKSDQNTASKGNRTYNYRVVMVKQDAELDMRGRCSAGQKVLASII 1159

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAE F  NCG++ALDEPTTNLD  N ESLA +L  I+E R+ Q+NFQLIVITHDE+
Sbjct: 1160 IRLALAECFGTNCGVIALDEPTTNLDAENIESLARSLGNIIEMRQSQKNFQLIVITHDEK 1219

Query: 1176 FAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            F   +   ++ + +Y+V +++ Q S I+
Sbjct: 1220 FLTYMNAAKYTDHFYKVRRNEAQKSQID 1247


>gi|402077911|gb|EJT73260.1| DNA repair protein RAD50 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1317

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 334/1261 (26%), Positives = 628/1261 (49%), Gaps = 125/1261 (9%)

Query: 4    KAIESVLQTIN-PHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            K ++  L+  N P T   V LS + AD+DR +P  MGV  AILE+VIF HQ+++ WPL +
Sbjct: 110  KTLDGTLKIYNGPDT---VSLSKKNADLDRMIPDKMGVPSAILESVIFCHQEDSLWPLSE 166

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LKKKFD++F A +YTKA++ +K L K    +++ Y+    + +  K           
Sbjct: 167  PSVLKKKFDELFEAVKYTKAIDALKVLRKKHGDDLRVYRTNEADAKRYK----------- 215

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQ-----------ISTMTA 171
               EK E+L+ ++++L   ++D++ +    +  +KD+  +  Q           +S +T 
Sbjct: 216  ---EKGESLEKEIRKLRAELEDLNAQY---DTAIKDMNAVGRQEKAKREEAMSFLSVVTD 269

Query: 172  RRST--LFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTK 229
             R+   L+E +++    +AEE++++ + +       E ++++ +  + ++E+E+ D+  +
Sbjct: 270  LRNKVDLYETRKQ----IAEELKESIDRMSEPDEELEAMLSEYKDKVKQMEQEREDLTAQ 325

Query: 230  IKFLEQNIDAYTAEITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPF 282
               L Q I +    +    +E G H S       ++  R S I +   +H +    +   
Sbjct: 326  YNNLHQEIVSSRKSLAEKHTERGKHASDQEHHERQLTARLSMIHEAAQQHEIRGY-DGDL 384

Query: 283  SNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 342
            ++     F  RI S L++ +R+L +  ++ E  LK   DS +        + A+++  + 
Sbjct: 385  TDTKVHGFEARIESILTNKKRELAELNQTQE-RLKNQHDSQIS------KLGARREYLVT 437

Query: 343  IKAGILKHIKE-----KENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFE 397
             +AG LK IKE        +RD+ +L +     + ++ +  ++  ++  +   L E + +
Sbjct: 438  NRAGTLKRIKELGERSARLQRDANDLDVDEGARAVLEAQATQLEEKLRGEQEGLKEADLD 497

Query: 398  INIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKD 457
              I ++  +L  ++ ++  LN E    +  + +R +L L+K E ++       + + + +
Sbjct: 498  SQINKETDQLNQLESQVARLNSELVQCSHLASERAQLDLRKKEAKDQGLYLHSVTETWAE 557

Query: 458  KIRDVLKGRLPLDRDLKKEITQALRALLTE-FDDLSSKSREAD---KEVNMLQMKIQEVT 513
            K+   L G  PLD      I  + + +L +   D+++K +  D   +E     MK+    
Sbjct: 558  KL-SALTG-APLD---PSTIGASYQEVLDQRHSDVAAKRKLVDSTHQEQKQFDMKLSVAR 612

Query: 514  DN---LSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADG 570
            D    L+K  +  ++  R   S+++  ++    I+++   L + +E     ++   + D 
Sbjct: 613  DEERALTKELERCEAVARKALSQVKREDEPEPQIESFLATLTATEEDLSTTETDIALFDA 672

Query: 571  MRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHM-----KVLSLES 625
            + + +   ++     + C  CER F   E D   K + ++    A+H+      +L  E 
Sbjct: 673  LLKHYGAADKKLNEDNKCSLCERTFG--ERDGLAKSKLMRKI--AKHLDPAEKNILKEEK 728

Query: 626  SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIK 685
                     L   R  YE Y + ++E++P A+  + +L    D   +  +     L   +
Sbjct: 729  VVLSRNVVILKNARKSYEAYQR-AQESLPGAQDKIKDLESSKDAVVKDLEAHDAALRDAE 787

Query: 686  ADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLST 745
                 VE + + V +       I+  +K+++ L     S    VR+ +EIQ +L      
Sbjct: 788  EKLREVESMAKAVRSITDAQARIRETEKEIERLSSQ-QSSISAVRSAQEIQDDLVDCSER 846

Query: 746  KDNLQNELEKLR-DEQR------YMENDLSNIQIRWHTLREEKVKAAN---TLRDVKKAE 795
               L N++ KL  D QR       +E D S +Q +     ++ V+  +    +  +KK  
Sbjct: 847  TRALSNKISKLSADRQRRKDMVSQLELDKSGLQRKMSEFEQKLVRKRDLVAQMETLKKDR 906

Query: 796  EELEHLMEEKG-QLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINF 854
             EL    EE G +L+  E  +A+A     +E        ++  +K+    +    Q+ + 
Sbjct: 907  AELAEKKEEDGIELEQLEPKIAKAKALREQE-------VSEGFIKI----QAADSQRSSI 955

Query: 855  QQEIEMLLKIASKIKEYYD------LRKDE-RFKELQEKKSQSESEVKSCKIRTDEILVE 907
               +E L  I+++I+ Y +      L   E   + L++   ++E E+       +++  +
Sbjct: 956  TSTVEKLKSISAEIENYVERGGPGLLAASELSIRNLEQVIERTEKEL-------NKLTAK 1008

Query: 908  LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK 967
            +++ +  + +  +  +NI+DNLN+ +T+  ++    EI  LE R  +    +  + E   
Sbjct: 1009 INKLRQELADSGRKEKNIKDNLNFNKTQRVLETLQREIGQLERRNAE-EDWNRIDAEANA 1067

Query: 968  HLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
               +RD L  + +   GT+S  +  +  N+ ++ +  YKD   ++ +  I+++TT+ A +
Sbjct: 1068 FKHKRDMLSGKSHSLMGTISTKEEVLLSNE-EMYEQDYKDARTKYREAHIKVETTKAAIE 1126

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----- 1082
            D+  Y  AL++A++ FH++KMEE+N+I  ELW+ TY+G DID I I S++EG+ T     
Sbjct: 1127 DMASYVAALEQAILSFHSLKMEEVNRIAGELWRATYQGTDIDTISIKSEAEGSSTTTSTL 1186

Query: 1083 -RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             RSY+Y++ M  GD E++MRGRCSAGQKVLAS+IIRLALAE+F ++CG++ALDEPTTNLD
Sbjct: 1187 RRSYNYRLCMVKGDLEMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLVALDEPTTNLD 1246

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSI 1201
              N  SLA +LH I++ R+ Q NFQLI+ITHDE F + +      + +YRV +D+ Q S 
Sbjct: 1247 EANIRSLAVSLHSIIQARQAQANFQLIIITHDEAFLRAMQVSDFCDTFYRVRRDEMQRSR 1306

Query: 1202 I 1202
            I
Sbjct: 1307 I 1307


>gi|322705558|gb|EFY97143.1| DNA repaire protein UVS6 [Metarhizium anisopliae ARSEF 23]
          Length = 1307

 Score =  340 bits (871), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 336/1260 (26%), Positives = 611/1260 (48%), Gaps = 132/1260 (10%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVVN--NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K   +++   +    + +  KD   +  + ++ 
Sbjct: 168  AALKKRFDEIFEALKYTKAIDNLKVLRKKHVEQLGKLQNDEAHNKANKDRGERAEKRMTG 227

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             Q + E  + + + L   +Q+  DKI          RK +   S +   ++   +++Q +
Sbjct: 228  LQAEIEDAREKCETLSAEMQETQDKIR---------RKHEQANSFLQIVQNLGNKKEQLE 278

Query: 184  YAALA-EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            Y   A  E++ T EEL     + E  +A+ E+ + +   E     ++   L+Q +     
Sbjct: 279  YRQDAVNELKQTFEELHEDDASLETALAQYENSMERYREEAEQSKSQYNDLQQELADSRK 338

Query: 243  EITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIR 295
             ++  LSE G + S       ++  R   +Q+    H      +   + +   +F  +I+
Sbjct: 339  NLSTKLSEQGKNQSDKDKYERQVKARMEMVQEAAVTHGFRGY-DGDLTEQHVKSFNEKIQ 397

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKE 355
              L++ +RDLE  +K +   L  A     +       +E +K A+ + +    + I   E
Sbjct: 398  KLLAEKKRDLERLQKENATELDKATGVITE-------LEGRKAARTQDRVSAKQRIGAIE 450

Query: 356  NERDSFELQISNLNLSH-----IDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
                  + + S +++       +D +   +     R   Q+ +  ++  I  +  +L+ +
Sbjct: 451  KRTSVLQNEASLIDVDEGAKAILDGQLEDISARFSRAQTQMEQANWDKQISDENDKLWQL 510

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            + + + L RE       + +R +L  +K E+ + K+K + + + +K K+   + G   LD
Sbjct: 511  ETENEKLGRELVECTRLASERAQLDYRKKEVTDRKRKLETLTNTWKSKLAAAIGGDWDLD 570

Query: 471  R---DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
                     +TQ  +AL           ++A + +   + K Q++   L   R+  +SK 
Sbjct: 571  TLETKFHTALTQQNKAL-----------QDARRSLEQTKQKQQKIEYRLKNARESQESKS 619

Query: 528  RFIESKLESLNQQIFS----------IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            R    + E+  +Q+ +          ID Y++ + S +++ +  +++ ++ D +   ++ 
Sbjct: 620  R----EAETCKKQVLTALHEVRDGAVIDDYKEEVGSVEQQVEDYRNELSLFDALVDYYNK 675

Query: 578  FERVARAHHVCPCCERPFSAEEE---DEFVKK--QRVKAASSAEHMKVLSLESSNADSYF 632
             +R+  +   C  CER F   +    D   KK  + +      +  K L      A +  
Sbjct: 676  CKRMLESKKRCLLCERHFDDGQSASLDRLSKKIEKNLDPKGKVDVEKDLK----EAMAGL 731

Query: 633  QQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVE 692
            + L K+R  Y+ Y +L+ E +P        +  E D   +  ++    +A        ++
Sbjct: 732  ESLRKVRSSYDTYQRLTAE-LPSIRDECKAIESEYDVLERQLEEHESRVAGEDGRVRDLD 790

Query: 693  VLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNLQN 751
             L + V    +L ++IQ  + QVD +     S G   R+ +EI  EL  S+  +   L+N
Sbjct: 791  DLSKTVSGISQLMKDIQDSESQVDRIMSQQLS-GGTTRSADEIH-ELQASIGEQMRGLKN 848

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN-------------TLRD-------- 790
             + KL  +++ M++ L ++++    LR +  KA                LRD        
Sbjct: 849  RVAKLTTDRQRMKDQLGSLELERSELRNKIGKAVGQLDKKNDIQNQIQALRDDMTHQRET 908

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQ 850
            +++A+EELE +        +D +   + +    + KE+++ D  D               
Sbjct: 909  IQRADEELEKVEPSI----VDARSARDDTLQRGRAKEQVIVDERDGIA------------ 952

Query: 851  KINFQQEIEMLLKIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDE 903
              N   EI+ML    + I++Y D      L  + R    L++  S +E ++    +R ++
Sbjct: 953  --NSVSEIKML---DNDIQDYIDRGGPSNLASNLRAIAALEKSISNTEKDIADLTVRANK 1007

Query: 904  ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFET 963
            +  ++D       + D++++NI DNL+YR+   +++    EIE LE+R          ++
Sbjct: 1008 LKQDID-------SGDRMKKNISDNLHYRKHLRQLEVLRGEIEELEDRNAH-EDYERLQS 1059

Query: 964  ELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTE 1023
            E      + +RLL+E     GTM      + R  +   +  YK   +++ +  I+++TT+
Sbjct: 1060 EARSLENQSNRLLAERGSVMGTMKTKDEELGR-LLQEWEMDYKGAKQKYRESHIRVETTK 1118

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG-AGT 1082
             A +DL +   A+DKA+M+FH+MKM E+N+I  ELWQ TY+G DID I I SD+E  +G 
Sbjct: 1119 AAIEDLAQCGAAVDKAVMQFHSMKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESNSGK 1178

Query: 1083 RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1142
            R+Y+Y++ M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD 
Sbjct: 1179 RNYNYRLCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDR 1238

Query: 1143 PNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             N +SLA +LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +D  Q+S+I
Sbjct: 1239 DNIKSLAESLHMIIKTRQAQSNFQLIVITHDEDFLRHMRCSDFCDSFFRVKRDATQNSVI 1298


>gi|443925117|gb|ELU44037.1| RAD50 protein [Rhizoctonia solani AG-1 IA]
          Length = 1378

 Score =  338 bits (868), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 339/1276 (26%), Positives = 613/1276 (48%), Gaps = 145/1276 (11%)

Query: 1    MEYKAIESVLQTINPH--TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
            M  K +E +L T +      ++  +S +CA++D E+P L+GVSK++LENVIF HQ+++ W
Sbjct: 174  MTMKTLEGILATSDGAKDNNKRGVISTKCAELDAEIPHLLGVSKSVLENVIFCHQEDSYW 233

Query: 59   PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
            PL + S LKKKFDDIF ATRYTKAL+ IK L K++  ++K  K +L +L   K  A +L+
Sbjct: 234  PLAEASVLKKKFDDIFEATRYTKALDNIKSLRKERVADLKADKERLHSLGLEKAHADRLK 293

Query: 119  ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQD---QISTMTARRS- 174
              I    E T  +  + QE E++   +D ++           + Q    ++  +  RRS 
Sbjct: 294  SKID---ELTNQVAEKTQESEETEAGLDAQVAANTKFYDSATRFQQIFLKVEHLEERRSQ 350

Query: 175  -TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVA----KRESDISKLEREKNDMDTK 229
              L  ++ K+   L   ++D  + LK+  +N++   A    KR +  ++L +E++ +   
Sbjct: 351  VILNMEELKKTVTL---VDDPTDVLKSKVDNYDAHCANQRTKRATKATELLQEEDSLAEA 407

Query: 230  IKFLEQNIDAYTAEITNLLSEAGAHMSRMN------ERDSTIQKLFARHNLGSLPNAPFS 283
             +  ++ ++        +  +A    +  N      +RD+ I  +  ++  G  PN   +
Sbjct: 408  RQDHQEAVNM----CGEMRGQAKVRQTNTNCNILNAKRDTEINNIGTKY--GIRPNTSAN 461

Query: 284  NEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI 343
                 + +    +RL ++ R       +  L L+   + Y   ++ +++    K+ +++ 
Sbjct: 462  GSLDRDSVVEFNARLGEMAR-------AQALELERLQNEYEVKSNEYQS----KKTELQT 510

Query: 344  KAGILKHIKEK---------------ENERDSFELQISNLNLSHIDERENKMRIEVERKT 388
            +   LKH KE                E   D+  L  + L L+     +   R+   +  
Sbjct: 511  EENALKHEKETLKTQMQRNRSQISTAETSLDTLRLLETELKLAASAVLDAYDRLSAAKAA 570

Query: 389  NQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKH 448
             Q  E  FE  I ++ + L     + + L ++   L   +E R KL LK+A+    + + 
Sbjct: 571  AQ--ESSFESQIAERTNALGIKTDERERLQQKLADLQSQAETRAKLGLKRADFSRKQAEI 628

Query: 449  KKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMK 508
              II  + ++ + +L      D  +++++ QAL     E   L + +  A +E++ ++  
Sbjct: 629  DTIIGIHNERFKAILGTDAEAD-TMERDVDQALIIKDKEIARLEADASAASREMHSVESA 687

Query: 509  IQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIF--SIDTYQKVLDSAKEKRDVQKSKYN 566
            +    + + K   ++ + ++ I+S L          +I   Q  LD+  E+   Q     
Sbjct: 688  LTSYREQIRKKEAELKALEQRIKSGLADSEHSTVGPAIKAAQAELDNWLEREIGQH---- 743

Query: 567  IADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESS 626
              +G    +    +  + H  C  C R    ++  EF K   V         K L     
Sbjct: 744  --EGAGHFYSKILKDGKTHKKCVICNRKMDEDQLIEFEKT--VGGHIQKRDTKYLEECKQ 799

Query: 627  NADSYFQQLDKLRM---VYEEYVKLSKETIPVAEKNLHEL---TEELDQKSQAFDDVLGV 680
            + + +  ++ +L+    V E   KL  E +P  +    EL   T +   ++Q   D    
Sbjct: 800  SREDWAAEVGRLQALLPVEETRDKLRDEELPAMQIRAEELDSKTAKATAEAQEVCDTETA 859

Query: 681  LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLEL- 739
            +  +K+ ++ ++ L        R  QE++  Q+++   E  L + G   +T EE+Q E+ 
Sbjct: 860  VKAVKSIQKELQSLKSQAGFITRTQQEVKSLQREIQQHERDLAATG-STQTAEEVQAEID 918

Query: 740  --SGSLSTKDNLQNELEKLRDEQ----RYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
                 + T D  +  L   RD Q    R +EN+ S+ Q+    L+       N ++D   
Sbjct: 919  QCGAHIKTLDRERTSLMAERDRQYQTLRTLENEYSSRQLEESELK-------NRMKDQDS 971

Query: 794  AEEELEHL----MEEKGQLDLDEKLLAEASGPLSK---EKEKLLSDYNDLKVKLNREYEE 846
              +E+E L    +E   +L   +  LA A  PL +   E+++  S++N     ++R+ +E
Sbjct: 972  ITKEIETLTKDNLEASARLKAIDGKLAGAQQPLQRLEQEQKRFQSEHNSTISLVSRKVQE 1031

Query: 847  QAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILV 906
                       I+ L  I++ I         ER K L   K++ +  ++ C+ R  E  +
Sbjct: 1032 -------LNSAIDRLENISAPI---------ERSKFLDVSKNRYDRALRQCETRVSEAAI 1075

Query: 907  ELDRFKDIVRNQ----DQIRRNIE----------DNLNYRETKAKVDKFASEIESLEERV 952
             +   +  V+       +I R I           DNL+ R+ K  ++   +EI   +   
Sbjct: 1076 SIAELEQSVQELREELAEIDREIHEAGATLAKFRDNLSLRKMKQDIENIQTEIAQHD--- 1132

Query: 953  LKIGGVSTFETELGKHLLERDR---LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDID 1009
            L+  G +  + +  ++ +E+D+   L S+  R  G + + ++ +  +K +L  +Q++ I+
Sbjct: 1133 LEQAGAAKAQFD-ERYQIEKDKENKLRSKQARLAGELGILKSQLKSSKQELA-SQFQGIN 1190

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            +++  QL+Q+K  +MAN DL++Y  ALD A+M++H +KMEE+N  +R LW +TY+G    
Sbjct: 1191 EKYTKQLVQVKMADMANNDLEKYAKALDNAIMKYHALKMEEVNDTMRHLWNKTYQG---- 1246

Query: 1070 YIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCG 1129
                   + G  T SY+Y+V+M     E++MRGRCSAGQK+LAS+IIRLAL+++F  NCG
Sbjct: 1247 -------TGGWPTASYNYRVVMMKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCG 1299

Query: 1130 ILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKY 1189
            ILALDEPT  LD  N ++LA++L  I+ +R+   NFQLI+ITHDE F + +GQ +  E Y
Sbjct: 1300 ILALDEPTNALDTENIDALASSLVDIINERRHLSNFQLIIITHDESFLRKLGQAEVMEYY 1359

Query: 1190 YRVAKDDHQHSIIEAQ 1205
            +RV++D  Q S+IE Q
Sbjct: 1360 WRVSRDSRQKSVIERQ 1375


>gi|115389648|ref|XP_001212329.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194725|gb|EAU36425.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1210

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 357/1262 (28%), Positives = 597/1262 (47%), Gaps = 158/1262 (12%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 31   GERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAM 90

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+              + +   +D+EK +  +     
Sbjct: 91   KYTKAIDNIKALRKKQNEELAKYKI--------------MEQHAKEDKEKADRAE----- 131

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
             ++SI                  K+QD+I  + A    L  Q+ ++ A LA++     E 
Sbjct: 132  -KRSI------------------KLQDEIEALRAETHQL-SQEMRRVAELADKAWKESES 171

Query: 198  LKNWKNNFEG--IVAKR-ESDISKLEREKNDMDTKIKFLEQNIDAYTA------------ 242
                    EG  I AK  ++ I  L+R   ++D   ++LEQN++ + +            
Sbjct: 172  YSQVLGALEGKRIEAKSVQTTIDNLKRHLVELDDPDEWLEQNLEQFESRQVQFQQQEEAQ 231

Query: 243  -----EITNLL-----------SEAG------AHMSRMNERDSTIQKLFAR-HNLGSLPN 279
                 EI + +           +E G      A+  R  ER   + K  AR +N+    N
Sbjct: 232  KESYMEIKDRIEQCRHKMGVKQAEYGKYENDKANYERQIERRQRMAKEMARSNNIRGFDN 291

Query: 280  APFSNEAALN-FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQ 338
                ++A ++ F+ ++R  L D  + L+  K+  +  L+    +  D   R       K 
Sbjct: 292  --VQDQAHMDEFMKKVRKLLKDHNQALDRIKREAQGELREVQTTLNDIGQR-------KS 342

Query: 339  AKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIE-VERKTNQLAER--- 394
            A  E K    + I   E E  S++ +++ +N+    +   +  IE +    NQ  ER   
Sbjct: 343  ALHETKNAAKRQIAANEKEAASYQGKLNEINVDEGVQAALEANIEDIMSSLNQAKERAQS 402

Query: 395  -EFEINIRQKQSELFAMDQKIKALNRE---KDVLAGDSE--DRVKLALKKAE--LENHKK 446
              ++  I+   SE+  ++ +   LN E       AGD    D +K  LK+ E  LE  K 
Sbjct: 403  ASWDKEIQNVNSEIRGLEDESARLNSELIDATKRAGDLARLDHLKKELKERERSLETMKG 462

Query: 447  KHKKIIDEYKDKIRDVLKGRLP--LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNM 504
             H   + +Y      V     P  L+++ +  + Q  + + T  +   + SRE    +  
Sbjct: 463  AHGGRLAKY------VGADWKPDTLEQEFQHSLDQESKLVSTAENKRDAVSRE----LEQ 512

Query: 505  LQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSK 564
            ++ K+ +V   L++ +K +   K  +E   E++  +    + + ++L   + + D+ +  
Sbjct: 513  VEFKLSDVKKTLAQRQKAL---KECVEEIREAVGDEP---EEFPEILKQRQAQLDIARKD 566

Query: 565  YNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE--------DEFVKKQRVKAASSA- 615
                 G+ +        A+   VC  C R F  + E        +  VKK +  A     
Sbjct: 567  AEQYAGIGEYMKTCLDTAKQAKVCRLCTRGFKNDTELQSFRNKLENLVKKAQRDAQDDEV 626

Query: 616  ----EHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
                E + V    SS               Y+ +++L    IP  EK   E   + D   
Sbjct: 627  RGFEEDVNVARAASS--------------AYDMWLRLKDTEIPELEKEEGEYLNKRDGLL 672

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEY-MLDSRGQGVR 730
               ++   ++++    K  VE L + V T  +   EI+  + Q+ DL     DS     R
Sbjct: 673  AELENHDKIVSEKMEKKRDVEALSKTVNTIVKYDGEIKSIRAQIQDLSSKQQDSNSS--R 730

Query: 731  TMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRD 790
            T+E+IQ E++        L+  L KL +++    +++++++++   LR+ K    N    
Sbjct: 731  TLEDIQDEINAISEKSRALKKTLLKLTNDKDQTRSEINSLELQ---LRDVKSNLDNAKFQ 787

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEASG----PLSKEKEKLLSDYNDLKVKLNREYEE 846
            +++  + L   ME+   L+  ++   E +      L+ E  ++ + Y+D+  +  +   E
Sbjct: 788  LERKADLLTR-MEQYKTLNTQQREAIEKADKDIEALTPELLQVQAKYDDISQRAEQRERE 846

Query: 847  QAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILV 906
              +      + I  L     +I+ Y+      +  + + +    E E+   +     I  
Sbjct: 847  MQQTISQLSENIHQLELSNEEIEAYHGRGGPSQLDQSKRELESIEQEISQLEEEQATITR 906

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            E+++    +++ +  +R   DNL YR+     +K   EIE LE +  ++   S F+ E  
Sbjct: 907  EINKISAQLKDSENTKRQYADNLTYRQANRTFEKVTEEIEQLEAQNAEVDR-SRFKEESE 965

Query: 967  KHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN 1026
            +   E + L ++     G M      + +   D     YKD   ++ +  I+++TT+ A 
Sbjct: 966  RRTREHNALAAKQASKMGEMKSKDDQLMQLLADWN-TDYKDAAAKYKEAHIKVETTKAAV 1024

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSY 1085
             DL RY  ALDKA+M++H +KMEEIN II ELWQ+TYRG D+D I I SD+E A G RSY
Sbjct: 1025 DDLARYGGALDKAIMKYHGLKMEEINAIIGELWQKTYRGTDVDTILIRSDNENAKGNRSY 1084

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V M    AE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N 
Sbjct: 1085 NYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNI 1144

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
             SLA +LH I+  R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q
Sbjct: 1145 RSLAESLHDIIRARRLQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNEKQKSIIERQ 1204

Query: 1206 EI 1207
             I
Sbjct: 1205 SI 1206


>gi|322692510|gb|EFY84416.1| DNA repaire protein UVS6 [Metarhizium acridum CQMa 102]
          Length = 1307

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 331/1253 (26%), Positives = 604/1253 (48%), Gaps = 118/1253 (9%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVVN--NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K   +++   +    + +  KD   +  + ++ 
Sbjct: 168  AALKKRFDEIFEALKYTKAIDNLKVLRKKHVEQLGKLQNDEAHNKANKDRGERAEKRMTG 227

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             Q + E  + + + L   +Q+  DKI          RK +   S +   ++   +++Q +
Sbjct: 228  LQAEIEDAREKCEALSAEMQETHDKIR---------RKYEQANSFLQIVQNVGNKKEQLE 278

Query: 184  YAALA-EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            Y   A  E++ T +EL     + E  +A+ E+ + +   E     ++   L+Q +     
Sbjct: 279  YRQDAVNELKQTFDELHEDDASLETALAQYENSMERYREEAEQSKSQYNDLQQELADSRK 338

Query: 243  EITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIR 295
             ++  LSE G H S       ++  R   +Q+    H      +   +     +F  +I+
Sbjct: 339  NLSTKLSEQGKHQSDKDKYERQVKARMEMLQEAAVTHGFRGY-DRDLTEHHVKSFNEKIQ 397

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKE 355
              L++ +RDLE  +K +   L  A     +       +E +K A+ + +    + I   E
Sbjct: 398  KLLAEKKRDLERLQKENAAELDKATGVITE-------LEGRKAARTQDRVSAKQRIGAIE 450

Query: 356  NERDSFELQISNLNLSH-----IDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
                  + + S +++       +D +   +     R   Q+ +  ++ +I  +  +L+ +
Sbjct: 451  KRTSVLQNEASLIDVDEGAKAILDGQLEDICARFSRAQAQMEQANWDQHISDENDKLWQL 510

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            + + + L RE       + +R +L  +K E+ + K+K + + + +K K+   +     LD
Sbjct: 511  ETENEKLGRELVECTRLASERAQLDYRKKEVADRKRKLETLTNTWKSKLATAIGSDWELD 570

Query: 471  R---DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
                     +TQ  +AL           ++A + +   + K Q+V   L   R+  +SK 
Sbjct: 571  TLETKFHTVLTQQNKAL-----------QDARRSLEQAKQKQQKVEYRLKNARESQESKS 619

Query: 528  RFIESKLESLNQQIFS----------IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDP 577
            R      E+  +Q+ +          ID YQ+ + S +++ +  +++ ++ D +   +  
Sbjct: 620  R----DAETCKKQVLTALHKVRDGAVIDDYQEEVGSVEQQVEDYRNELSLFDALVDYYSK 675

Query: 578  FERVARAHHVCPCCERPFSAEEE---DEFVKK--QRVKAASSAEHMKVLSLESSNADSYF 632
             +R+  +   C  CER F   +    D   KK  + +      +  K L    ++ DS  
Sbjct: 676  CKRMLESKKRCLLCERHFDDGQSASLDRLSKKIEKNLDPKGKVDVEKDLKEAMASLDS-- 733

Query: 633  QQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVE 692
              L  +R  Y+ Y +L+ E +P        +  E D   +  ++    +A        ++
Sbjct: 734  --LRSVRSSYDTYKRLTAE-LPSIRDECKAIESEYDALERQLEEHESRVAGEDGRVRDLD 790

Query: 693  VLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNLQN 751
             L + V +  +L ++IQ  + QVD +     S G   R+ +EI  EL  S+  +   L+N
Sbjct: 791  DLSKTVSSVSQLMKDIQDSESQVDRIMSQQLS-GGTTRSADEIH-ELQASIGEQMRGLKN 848

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN-------------TLRD-------- 790
             + KL  +++ M++ L ++++    LR +  +A                LRD        
Sbjct: 849  RVAKLTTDRQRMKDQLGSLELERSELRNKIGQAVGQLDKKNDIQNQIQALRDDMIHQRET 908

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQ 850
            +++A+EELE +        +D +   + +    + KE+++ D  D+              
Sbjct: 909  IQRADEELEKVEPSI----VDARSARDDTLRRGRAKEQVIVDERDVIA------------ 952

Query: 851  KINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDR 910
              N   E+++L    + I++Y D          Q   +  E  + + +    ++ V  ++
Sbjct: 953  --NSVSEMKLL---DNDIQDYIDRGGPSNLASNQRAIAALEKSISNTEKDIADLTVRANK 1007

Query: 911  FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLL 970
             K  + + D++++NI DNLNYR+   +++    EIE LE+R          ++E      
Sbjct: 1008 LKQDIDSGDRMKKNISDNLNYRKHLRQLEVLRREIEELEDRNAH-EDYERLQSEARSLEN 1066

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            + +RLL+E     G+M      + R  +   +  YK   +++ +  I+++TT+ A +DL 
Sbjct: 1067 QSNRLLAERGSVMGSMKTKDEELGR-LLQEWEMDYKGAKQKYRESHIRVETTKAAIEDLA 1125

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG-AGTRSYSYKV 1089
            +   A+DKA+M+FH+MKM E+N+I  ELWQ TY+G DID I I SD+E  +G R+Y+Y++
Sbjct: 1126 QCGAAVDKAVMQFHSMKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESTSGKRNYNYRL 1185

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
             M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA
Sbjct: 1186 CMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLA 1245

Query: 1150 AALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             +LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +D  Q+S+I
Sbjct: 1246 ESLHMIIKTRQAQSNFQLIVITHDEDFLRHMRCSDFCDSFFRVKRDATQNSVI 1298


>gi|398409066|ref|XP_003855998.1| putative RAD50 [Zymoseptoria tritici IPO323]
 gi|339475883|gb|EGP90974.1| putative RAD50 [Zymoseptoria tritici IPO323]
          Length = 1303

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 334/1238 (26%), Positives = 597/1238 (48%), Gaps = 108/1238 (8%)

Query: 17   TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
             GE+  +S R A++D  +P  +GVS+A+LE+VIF HQ+E+ WP+  P  LK+KFD IF A
Sbjct: 123  AGERNVISSRVAEIDTMMPRFLGVSRAVLESVIFCHQEESLWPMSSPKDLKEKFDQIFEA 182

Query: 77   TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
             +YTKA++ IK L K++  E+   K   E  +   D A KL++ +    ++++A+++Q++
Sbjct: 183  LKYTKAIDNIKILQKNKKIELVQLKANEEIAKANNDKAIKLQKKLQTLTDQSDAMRDQVK 242

Query: 137  ELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYA--ALAE---EI 191
            E    +Q  + +   +E   K   + +  +  +  RR    E+Q K+ +  +L E   E+
Sbjct: 243  EY--GVQQREAQSRASEY-FKKAGENELIVGKLQGRR---IEKQTKEESVRSLRENIVEM 296

Query: 192  EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
             D+D++L+     ++  V   + D+S  + +   ++  I+       A   E  +  ++ 
Sbjct: 297  TDSDQQLETMLQQYDERVEAYQDDLSAKKGQYQALEGNIQSARNRRIAKERECGSFEAQK 356

Query: 252  GAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKS 311
             ++  ++  R   I++    H++    +   ++  A  F++RI     + + + E  +  
Sbjct: 357  ESYDRQVEGRKRMIKETARSHDIRGY-DLEINDVQAKAFMDRITKMAREQQEEFEQARLE 415

Query: 312  DELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLS 371
             +  L+         N+R   +   K    +   G  + I   +++R+  ++ +     +
Sbjct: 416  LQDLLQQQQKELNRINERKSALGQSKATARQTITGYERKISSIQSQRN--QIDVDEGARA 473

Query: 372  HIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDR 431
             ++ R  + + ++ +    LA   ++  I    SEL  ++   + L+ E    +    + 
Sbjct: 474  ALESRLQEKKGQLAKLQEALASAAWDTKIDGDNSELRRLEDVREKLDAESADASRRGGET 533

Query: 432  VKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDL 491
             +L L K  ++  ++    +   + DK+  VL G+      ++++  +AL+A   E ++ 
Sbjct: 534  AQLDLLKKGIQEDQRSLDTMTSSHGDKLTTVL-GKAWSPTTIERDFERALKAADAELEEA 592

Query: 492  SSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVL 551
              +    + E+  L  K+ E    L+  ++D+   ++ ++       Q+      Y  V+
Sbjct: 593  KKQRDGTNSELGFLNSKLMERQAELANAKEDLKFAEKIVKEACGERPQE------YLAVM 646

Query: 552  DSAKEKRDVQKSKY----NIADGMRQMFDPFERVARAHHVCPCCERPFS--AEEEDEFVK 605
               + +RDV KS       I + ++   D  ERV    + C  C R F   AE      +
Sbjct: 647  KRLEGERDVAKSATENFGQIVEYLQSCIDEGERV----NACKTCCRGFKNRAELSRMIEQ 702

Query: 606  KQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTE 665
             QR +   + E  K    E  +A+            YEE+ +LS + IP  + +L +L +
Sbjct: 703  VQRQQQQQNGEDTKD---ELQDAEEALDLAKGANSQYEEWERLSTKEIPTKKADLAKLEQ 759

Query: 666  ELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSR 725
            E ++     + +  + A+  ++K SV  + + V    +    I   Q  VD LE  L S 
Sbjct: 760  EREKLVSQLEGLDTIFAEKSSNKSSVTNVERTVRNIQKYVSGIAEKQSAVDGLESKLQSV 819

Query: 726  GQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
            G   R +E +Q ++  +   + +++  +     +Q     +++ +Q+          + +
Sbjct: 820  G-ASRGIEAVQTDVKKNSEDQKSVRARIADATRQQSKATANVNALQL----------EIS 868

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDE----KLLAEASGPLSKEKEKLLSDYNDLKVKLN 841
            NT   + KA+ EL     EK +LD  E    KL A+    + K  ++L      L  KL+
Sbjct: 869  NTQGSLSKADYELR----EKKRLDAQEEEYNKLTADQRDSIKKCDDEL----QGLSAKLS 920

Query: 842  R---EYEEQAEQKINFQQEIEML----------LKIA-SKIKEYYDLRKDERFKELQEKK 887
                +Y+E +    +  +E++            LK+A S+IK Y+D   DE+ ++ +   
Sbjct: 921  TAQAKYDEISSSGADKDRELQAKSSKMGASLNKLKMAESEIKAYHDRGGDEQLRQGKRAV 980

Query: 888  SQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIES 947
               ++E    +    E++  + + ++++ N    RR+I DN  YR    ++ K   EI  
Sbjct: 981  EDLKAEEARHEAEKTEVIRNIKKAEELLHNHADTRRSISDNQRYRRDLRQLKKVVEEIAE 1040

Query: 948  LEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNK---------- 997
            LEE                 H  E+D+   E NR     S+    IS  +          
Sbjct: 1041 LEE-----------------HNAEKDQ--EENNRQAQRWSMRMNEISAKQSSVIGQLKSL 1081

Query: 998  -------IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
                   I+     YKD         + ++TT+ A +DL RY +ALDKA+M++H++KMEE
Sbjct: 1082 SDQIEADIEEYNVDYKDAAGSLKKAHVYVETTKAAIEDLGRYGSALDKAIMKYHSLKMEE 1141

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQK 1109
            IN+II ELWQ+TY+G DID I I S+ E     ++Y+Y+V M   DAEL+MRGRCSAGQK
Sbjct: 1142 INRIIAELWQKTYQGTDIDTILIRSEHETVKANKTYNYRVCMVKQDAELDMRGRCSAGQK 1201

Query: 1110 VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIV 1169
            VLAS+IIR+ALAE F +NCG++ALDEPTTNLD  N  +LA +L  I++ R+ Q NFQLI+
Sbjct: 1202 VLASIIIRMALAECFGVNCGLIALDEPTTNLDSANIRALATSLSEIIKMRRQQSNFQLII 1261

Query: 1170 ITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            ITHDE F   +G   + + Y+RV +D+HQ S IE Q I
Sbjct: 1262 ITHDEEFLTQMGSSDYTDDYFRVFRDEHQLSRIEKQSI 1299


>gi|366986523|ref|XP_003673028.1| hypothetical protein NCAS_0A00770 [Naumovozyma castellii CBS 4309]
 gi|342298891|emb|CCC66637.1| hypothetical protein NCAS_0A00770 [Naumovozyma castellii CBS 4309]
          Length = 1304

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 371/1272 (29%), Positives = 619/1272 (48%), Gaps = 148/1272 (11%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L  IN + G++  LS R  ++D +VP  +GV KAILE VIF HQ+++ WPL +
Sbjct: 109  FKTLEGQLAAINQN-GDRTTLSTRSIELDTQVPLYLGVPKAILEYVIFCHQEDSLWPLSE 167

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LKKKFD+IF A ++TKA++ +K + KD   +IK  K  +E+L+  +D +   + +I 
Sbjct: 168  PSNLKKKFDEIFQAMKFTKAIDNLKAIKKDMTVDIKLLKQSVEHLRVDRDRSRGTKMNIV 227

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            Q Q + +  + +++++E  +Q I ++   ++   K  ++ Q  +S +   R  + ++   
Sbjct: 228  QLQAQIDEYQMKVKDVEIELQKITEQ---SDKLFKSNQEFQQVLSKIQNLR--MLDKH-- 280

Query: 183  QYAALAEEIEDTD---EELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDA 239
                L EEIE+     E +   K   E ++A       + E+E   ++ +I  L+++ + 
Sbjct: 281  ----LKEEIENVSNSVELISLPKQELEELLANFSKSFDENEQEVKKIEVEIDILKRDANQ 336

Query: 240  YTAEITNLLSEAGAHMSRMNERDSTIQKL------FA-RHNLGSLPNAP---FSNEAALN 289
              ++ T L+ + G   +R       +  L      F+ R+NLG + N P   F  E +  
Sbjct: 337  SQSKYTGLVRKMGELQAREEAYKKNVITLESLSMAFSDRYNLGYVGNKPQEFF--EKSKK 394

Query: 290  FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILK 349
            F + + +  S+ E++  ++ KS E  L    +S    N R   +E  K  + +I A I K
Sbjct: 395  FNDDLNTSFSNFEKESRNRLKSLENELSEITNSETIQNQR---LEYSKADQQKISAEIEK 451

Query: 350  HIKEKE-NERDSFELQISNLNLSHIDERENKMRIE--VERKTNQLAEREFEINIRQKQSE 406
               E   NE    +L+ +   L+  +E+      +  + +  + L E+  ++ I   +S+
Sbjct: 452  LTSELTINEFTHSDLEAAKAKLNQYNEKLTSWENDDIITKLNSTLKEKNDQMII--AESD 509

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
            L  + ++I   N++ D+ A       KLAL K  L+      +K+ ++  +  R     +
Sbjct: 510  LQQIQERIMKTNQQADLFA-------KLALIKGSLKEKLHSLEKVTEKVTNDER-ARNWK 561

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
            L +  DL  +  +    L  E    +    E DK      +K+      +   +   +++
Sbjct: 562  LTVPDDLDMDFKRFYINLQKEIAVNNKNIHEKDKSYTEANIKLTNAQKEIENSK---ETE 618

Query: 527  KRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFER----VA 582
            +R I + L+S   +  SID Y +V+   + +   + +  N+   M Q    F R    +A
Sbjct: 619  QRLI-TALQSALPEDCSIDEYDEVV--LETELSYKTALENLK--MHQTTLEFNRKALEIA 673

Query: 583  RAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
                 C  C R F   E  +F  K  Q +KA + A     L         Y   LD LR 
Sbjct: 674  ERDSCCYLCSRKF---ETADFKSKLLQELKAKTDANFETTLKDTVKEEKEY---LDSLRA 727

Query: 641  VYEEYVKLSKETIPVAEKNLH----ELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQ 696
            +  + +KL   +     KNL      L E +    +    V  +   +K D++  E +++
Sbjct: 728  LERDVIKL--HSTQTNSKNLGNGLTSLVEHVSSLKKELAKVEEIGNGLKEDRDHCEKVLR 785

Query: 697  P-VETADRLFQEIQLWQKQVDDLEYML----DSRGQGVRTMEEIQLELSGSLSTKDNLQN 751
            P V+   +L +E +  +K+  DL   L    DS G GV+T++E    L+     K+N   
Sbjct: 786  PLVDQVAQLRKETRDLEKESQDLSEELQIYGDSDG-GVQTVDE----LNQQQQDKNNFMR 840

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE----ELEHLMEEKGQ 807
            +L K          D+ ++Q      RE K++  +TL +V K       E+E +++ K  
Sbjct: 841  QLRK----------DIQDLQ----NERESKMREHSTLLNVIKDRNLKINEIERVLQRKQN 886

Query: 808  LD---------LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEI 858
            +D         L E LL   +  L  E  +L +   +L   LN E E        F  E+
Sbjct: 887  IDDDLHSKNAELKEILLRIQT--LKTELIELRNKKQELSKVLNNEMER-------FSGEM 937

Query: 859  EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVE----------- 907
            E   K    I  Y D R     +E+ E  +    ++  C   +++I  E           
Sbjct: 938  EAKRKNLGSITSYLD-RISNLKQEVSEFDNSGAKDLGMCIQESEDIQKEIAYITKDIEVK 996

Query: 908  ---LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
               L+  KD +++    +RN+E N++    +AK+ +  ++I  L+        +   E E
Sbjct: 997  QNHLNSKKDKLKDSSNEKRNLEQNIHLANLRAKLKETENDISRLD--------IQNAEAE 1048

Query: 965  LGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLI 1017
              K+  E  RL      LS  N  + G +   Q+ +      L+ + YKD+D+++  + +
Sbjct: 1049 RDKYQQESLRLRNLFEKLSAENAGKLGEIKQLQSQVDSLSQQLR-SDYKDVDEKYHKEWV 1107

Query: 1018 QLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS 1077
             L+T      D+D Y  ALD A+MR+H +KM++IN+II ELW++TY G DID I+I SD 
Sbjct: 1108 SLQTRTFVTDDIDTYSKALDSAIMRYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDE 1167

Query: 1078 EGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
              +  R  SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL+ETF +NCG++ALDE
Sbjct: 1168 VSSTVRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDE 1227

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA +L  I+E R+ Q+NFQLIVITHDE+F   +   Q  + +++V +D
Sbjct: 1228 PTTNLDEENIESLAKSLSNIIEMRRHQKNFQLIVITHDEKFLNHMNASQFTDHFFQVKRD 1287

Query: 1196 DHQHSIIEAQEI 1207
            D Q S IE  +I
Sbjct: 1288 DRQKSQIEWVDI 1299


>gi|190344796|gb|EDK36551.2| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1302

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 351/1267 (27%), Positives = 620/1267 (48%), Gaps = 145/1267 (11%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L  ++   G+K  +S + A++D ++P  +G S+AIL+ VIF HQD++ WPL +
Sbjct: 113  FKTLEGQLSIMDQ--GQKSTISTKNAELDSQIPVYLGASRAILDYVIFCHQDDSLWPLSE 170

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
             S LKK+FDDIF A+++TK L+ +K + KD + +IK     +++L+  K  A K+R  + 
Sbjct: 171  ASVLKKRFDDIFEASKFTKVLDSLKTIKKDMSNDIKLIDQNVQHLRVDKSRADKIRSKVQ 230

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ-- 180
                  +AL  ++  L  +I++   K    E      +  Q+ +S    R   L   Q  
Sbjct: 231  STSVTCDALSEEIANLTSTIEE---KEREAEALFVSNQSFQEILS----RHEQLQYSQKS 283

Query: 181  -QKQYAALAEEIE---DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQN 236
             Q Q   + + IE   D++  L +  +NFE  + +R+++ S    E       ++  E+ 
Sbjct: 284  CQVQLERIVKNIEILPDSETVLMSRLDNFESHLQERQAEASMKHNE-------LRASEER 336

Query: 237  IDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI----- 291
            +    +E+ +L    G+  S+     +  QKL       SL   P  N+     I     
Sbjct: 337  LQNLRSELNSLSRTEGSLKSKEELYHTNKQKLVQLIEENSLAKDPKPNDMNFQKIVDDLD 396

Query: 292  NRIRSRLSDLERDLEDKKKSDELALKMAWD-----------------------SYLDAND 328
            N I+   S  ER     K S E A     +                       S ++   
Sbjct: 397  NTIKKASSAYERLKSSNKLSYEQAASRVHEISETITKSEQRYQYYQQDLSNTRSQINEGR 456

Query: 329  RWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKT 388
            +  N + Q++A++EI      H +E ++  D ++ Q  N  +  +D       IE ER  
Sbjct: 457  KRLNTQQQQEAELEI------HKRELKDLEDKYDPQSHNDAIKSLDSL-----IENER-- 503

Query: 389  NQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKK- 447
            +QLA+ E         S+   + +K+   +++ D L+  S  +  +  K+  L  H K  
Sbjct: 504  SQLAQLE---------SQSDTLGRKVAQASKQSDTLSKVSFIKEGITRKEVTLAAHLKSL 554

Query: 448  ----HKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN 503
                 K I  +Y++   D          +L+ E+T+A   L    D  SS+ +   ++V 
Sbjct: 555  GSLFEKMIGKQYENTGSD----------ELEAELTKAGSRL----DLKSSEQKNFSRQVE 600

Query: 504  MLQMKIQ----EVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEK-R 558
             L +K++    ++T+NL K     +   + IE +          ID Y++V+   +E  R
Sbjct: 601  SLTVKLESTQAQITENLDKTASIKNDIVKVIEEE---------EIDFYEQVISDLEENHR 651

Query: 559  DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS-SAEH 617
            D  +S  N  +   Q       +A +   C  C R F +    +F+ + R    S +AE 
Sbjct: 652  DALES-LNTFEVTNQFKIKAIEIAESEKYCTLCLRHFDSPGLSKFLTELRANVKSMTAET 710

Query: 618  MKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDV 677
            ++  + E++      + ++ L + Y +     ++ +P  E    + T+++    +    +
Sbjct: 711  LEKEAKETAKELEQAKNINPLILKYRQ----CRQELPELEAKKTKETQQMKDAEKLKAKI 766

Query: 678  LGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQL 737
               L  ++ D +S++ L  P+    R+ +EI++ Q+++  LE  L   G      E+  +
Sbjct: 767  DSELESLQGDVDSLKALRTPLAEVSRIRKEIEVSQRELSSLEDSLTDYGS---VTEQSPI 823

Query: 738  ELSGSLSTKDNLQNELEKLRD------EQRYM-ENDLSNIQIRWHTLREEKVKAANTLRD 790
            EL   +   D +  E++ LR       E +Y+ + +L+ ++ R   ++++K+  +   R 
Sbjct: 824  ELQREM---DRINREMKALRQSVSDNVESKYVKQRELARLEGR---VKDKKLAISVLERA 877

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLK---VKLNREYEEQ 847
            +   E E   +   + Q+ + ++ + E    L  ++EK   +  +LK   V++ +  E++
Sbjct: 878  LIDQEHEKVAIDGYEAQVVVLQQSMTEIEQELGIQREKRKEEEENLKRITVEIEK-VEQE 936

Query: 848  AEQKINFQQEI-EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILV 906
             E +IN   ++ + +  +   IKE+ D+ +  +F+ +    S   S ++  ++   +I  
Sbjct: 937  KEAEINRNHKLKDQVSDLLQNIKEFDDVDR-VKFETVSNDISTINSNIEKLEVEISKIQK 995

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            ++   +  +   + ++  I DNL+YR  + ++++  ++I      +L I    +   E  
Sbjct: 996  DMKMVEKSINEANNLKSQIRDNLDYRRLQNEMNEIENQI-----GMLDIEDAQSKRNEYN 1050

Query: 967  KHL----LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
            +      LE   L SE     G +   +  I   K DL  ++Y D+D+R+  + ++L+T 
Sbjct: 1051 ERTREIRLEITNLNSEHAGKVGEVKQLRDQIRTMKEDLN-SEYVDVDQRYQAEWVKLQTN 1109

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGA 1080
             +A  DL  Y  ALD A+M++HT KME IN+I+ ELW+QTY+G D+D I I SD   +  
Sbjct: 1110 MLATSDLQTYSKALDNAIMKYHTHKMESINRILNELWKQTYKGTDVDTIAIKSDINLQAK 1169

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            G RSY+Y+V+M   D EL+MRGRCSAGQKVL S++IRLALAE F  NCGI+ALDEPTTNL
Sbjct: 1170 GNRSYNYRVVMYKQDCELDMRGRCSAGQKVLTSILIRLALAECFGSNCGIIALDEPTTNL 1229

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            D  N ESLA +L+ I+E R+GQ+NFQLIVITHDE+F   IG  Q  + +YRV +D++Q S
Sbjct: 1230 DVENTESLAQSLNNIIEFRRGQKNFQLIVITHDEKFLSHIGGEQFTDNFYRVQRDENQRS 1289

Query: 1201 IIEAQEI 1207
            II +  I
Sbjct: 1290 IIRSLPI 1296


>gi|340897447|gb|EGS17037.1| hypothetical protein CTHT_0073630 [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1315

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 338/1230 (27%), Positives = 596/1230 (48%), Gaps = 89/1230 (7%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S R A++D+ V   +GV  AIL+ VIF HQD++ WP+ +P+ LKK+FD+IF 
Sbjct: 122  NNGERTVISTRVAELDKLVSEKLGVPPAILDAVIFCHQDDSLWPMSEPAALKKRFDEIFE 181

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK-------LRESISQDQEKT 128
            A +YTK +E I+ L K +  E+K  K +    +  K+ A K       L   I + +EK 
Sbjct: 182  AQKYTKVIENIRLLKKKKGDELKILKEREVQDKANKERAEKVDRLMAQLTREILEAREKC 241

Query: 129  EALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALA 188
              L  QM+E    I+D   K       LK +  +Q +   +  ++  + E + +      
Sbjct: 242  NELSKQMEEESAKIKD---KYEQANSFLKIMNDLQTKTEKLEYKKDAIVELRSR-----I 293

Query: 189  EEIEDTDEELKNWKNNFEG----IVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEI 244
            EE+ D DE L+N  + +E     IVA R+   ++     +D+  ++K       A  AE 
Sbjct: 294  EELPDPDEVLRNTLDEYEQTINRIVADRDHKAAQF----HDLQAELKSARDQHTAKAAEQ 349

Query: 245  TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERD 304
                S+   +  ++  R+  I++   RH +    N    +     F  RI+  L+D  R+
Sbjct: 350  GKHQSDKEKYERQLVARERMIREAAERHEIRGY-NGDLDDRRIAIFNERIQKILNDKRRE 408

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQ 364
            LE  ++ ++  L        +   R +++   ++A  +    + K +   + E  S ++ 
Sbjct: 409  LERLQRENQEELDRKTAVIAERESRKQSVIRDRKAAKDRIISLGKDMASIQGELSSIDID 468

Query: 365  ISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVL 424
                 +   + +E + RIE  +   Q A    +  I++   E++ ++     L RE    
Sbjct: 469  EGTEEMLRAEMKELQARIEAAKADEQNAN--LDAQIKEVNEEIWKLESLSAKLARELVEC 526

Query: 425  AGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL-KGRLP--LDRDLKKEITQAL 481
               + +R +L L++ +L   K++ + + + + ++   +L +G  P  L+RD    + Q  
Sbjct: 527  TRLASERAQLDLRRKQLAERKRELEIMTNTWNEQFSTLLGEGWRPETLERDFSDVLKQQ- 585

Query: 482  RALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQ-- 539
            + L+ E      K     +E+   + ++    +  +K   ++++  R +++ ++      
Sbjct: 586  QLLVGEH---RKKKDATQQELKQAEYQLSNARNLHNKLTNEMEACMRAVQTAMKEARDLD 642

Query: 540  QIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEE 599
                +D Y  +L++ +++    ++   + D +++ +   +  A   + C  C+R F+ +E
Sbjct: 643  SAPPVDEYITMLETDEKELAEVETALKLYDELKKHYSTIKDRALRFNKCYICDRDFTNQE 702

Query: 600  EDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVKLSKETIPVA 656
              +    ++V      E  K L LE   A  + + LD LR V   Y+ Y +LS E     
Sbjct: 703  AAKTRLLEKVAKRLGDEEKKEL-LEDQAA--FMKSLDILRAVRVKYDTYQRLSSE----- 754

Query: 657  EKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVD 716
               L +L+ E+D ++   +D++  L          +  +Q +ET ++   +I    K + 
Sbjct: 755  ---LPQLSREIDSETNRREDLVRRLEDQDLAFREADNKLQEMETLNKHVMKITQLLKDIS 811

Query: 717  DLEYMLDSRGQ----GVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
            D E  ++   Q      R+ +EI  E +         Q +L KL  E++ +++ +  +++
Sbjct: 812  DAEKQVERSQQLSNIETRSADEINEEQTTCAEQTRAAQAKLTKLTAEKQRLKDLVRQLEV 871

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
                L  +   A   L   K+ +E +    E++ Q          A     +E E+L  +
Sbjct: 872  ERLQLENKISSAVQQLERKKRLQESIARHKEDQNQA-------RNAVQEADEELERLEPE 924

Query: 833  YNDLKVKLN--REYEEQAEQKIN-----FQQEIEMLLKIASKIKEYYDLRKDERFKELQE 885
                +  L+  R+     EQK+        Q +  L  I S+I+EY D          Q 
Sbjct: 925  IAGARAALDEARQACRAKEQKVAAERDAIAQTVSELNMINSEIQEYLDRGGPSSLAANQR 984

Query: 886  KKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
              +  E+++ + +    E+ V++++    + N D  +RNI DNL YR+   + D    EI
Sbjct: 985  AIANLETQMANLEGEMRELTVQINKLNKEIDNSDAKKRNIADNLTYRKNLREKDALEREI 1044

Query: 946  ESLEERVLKIGGVSTFETELGK-HLLE--RDRLLSEVNRCQGTMSVYQTNISR----NKI 998
              LE R         ++  + + H LE  R +L ++  R  G MS       R     ++
Sbjct: 1045 AELEAR----NAQEDYDRLIKEAHYLEAHRSKLNADRERLMGMMSTKDEEFRRLNEEYEL 1100

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            DLK A+ K     + +  I+++TT+ A +DL R   A+D A+M++H+  ME+IN+ I EL
Sbjct: 1101 DLKDAKAK-----YKETHIKVETTKAAIEDLGRGMAAVDHAIMQYHSKMMEQINRTIAEL 1155

Query: 1059 WQQTYRGQDIDYIRIHSDSEG-----AGTR-SYSYKVLMQTGDAELEMRGRCSAGQKVLA 1112
            WQ TY+G DID I+I SD E      +GTR +Y+Y+V M  GD E++MRGRCSAGQKVLA
Sbjct: 1156 WQSTYQGTDIDTIQIRSDVESTTSSDSGTRRNYNYRVSMVKGDTEMDMRGRCSAGQKVLA 1215

Query: 1113 SLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITH 1172
            S+IIRLALAE+FC NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q N QLIVITH
Sbjct: 1216 SIIIRLALAESFCANCGLIALDEPTTNLDSDNIRSLAESLHGIIKARQAQGNLQLIVITH 1275

Query: 1173 DERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            DE F + +      + +YRV +D+ Q+S+I
Sbjct: 1276 DEEFLKYMQCSDFCDDFYRVKRDEKQNSVI 1305


>gi|358390888|gb|EHK40293.1| hypothetical protein TRIATDRAFT_252710 [Trichoderma atroviride IMI
            206040]
          Length = 1308

 Score =  336 bits (862), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 327/1258 (25%), Positives = 614/1258 (48%), Gaps = 118/1258 (9%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS+A+L+ VIF HQDE+ WPL +P
Sbjct: 111  KTLDCSLVVVN--NGERTTTSTRTAQLDEMIPERLGVSRAVLDAVIFCHQDESLWPLSEP 168

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            S LKK+FD+IF A +YTKA+E +K L K Q +++   +    + +  KD   +  + +S 
Sbjct: 169  SALKKRFDEIFEAQKYTKAIENLKVLRKKQVEQLSMLQNDEAHNKANKDRGERAEKRMSG 228

Query: 124  DQEKTEALKNQMQELEKSIQD----IDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQ 179
             Q + E+ ++Q + L   +Q+    I  K       L+ ++ + ++   +  R+  + E 
Sbjct: 229  LQTEIESARDQCEALTVEMQETQVRIKQKHEQANSFLQIVQNLSNKREQLEYRQDAINEL 288

Query: 180  QQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDA 239
            +Q       +E+ +TD+ L+   + +E  + + + +  + + +  ++  ++    Q+  A
Sbjct: 289  KQ-----TIDELPETDDALERALSQYEESMGRYQEEAEQNKAQYAELQQELTNHRQSQSA 343

Query: 240  YTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLS 299
              AE   L S+   +  ++  R   +Q+  +++N     +   S++    F ++I+  L+
Sbjct: 344  KLAEQGKLQSDKEKYERQLKARVQLVQEAASQYNFRGF-DEDVSDQHIQVFQDKIQKLLT 402

Query: 300  DLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERD 359
            +  R+LE  +K +   L  A     +       +E +K A+ + +    + +   E    
Sbjct: 403  EKRRELERLQKENAAELDKATGVITE-------LEGRKAARTQDRVSAKQRMGAIEKRTS 455

Query: 360  SFELQISNLNL---------SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
              + +  N+++           +DE E++ +        +L +  ++  + +   + + +
Sbjct: 456  VLQNEAGNIDVDEGAKAILDGQLDELESRFK----HAQQELEKSNWDQQLTEANDKQWQL 511

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            D + + L RE       + +R +L L+K E+ + K+K   +I+ +K K+ + L       
Sbjct: 512  DNENEKLGRELVECTRLASERAQLELRKKEMSDRKRKLDTLIETWKPKLSNTLGDDWE-- 569

Query: 471  RDLKKEITQALRALLTEFDDLSSKS-READKEVNMLQMKIQEVTDNL-------SKHRKD 522
                      L +         SK+ +EA K  +  + K Q+V   L        K  ++
Sbjct: 570  -------PHTLESRFQSIQSRQSKAVQEAQKRRDQTRQKQQKVEYRLKTAKETHGKKTQE 622

Query: 523  VDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVA 582
            ++  K+ + + L+++      ++ Y   + + +++ +  ++  ++ D +   ++  +R+ 
Sbjct: 623  MNQMKQKVVAALQNVRDNAV-VEDYVDEVAAVEQQVEELRTDLSLFDALFDYYNKCKRML 681

Query: 583  RAHHVCPCCERPFSAEEE---DEFVKK--QRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
                 C  C+R F   +    D   KK  + +      +  K L     N     + L  
Sbjct: 682  DTQKKCRLCDRHFDDGQSAALDRLSKKIDKHLDPKGKVDTEKDLKEAVDN----LEALRA 737

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
            +R  ++ Y +LS E +P  +        E +   +  +D   ++A  +     +  L + 
Sbjct: 738  VRSAFDTYERLSAE-LPALQDEWKTAENEFETLEKELEDEDALVAAAEEKLRDLGDLSKT 796

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNLQNELEKL 756
            V    +  +EI+  + QVD +     S G   R++EEI  EL  S+S +   L+N++ KL
Sbjct: 797  VANISQTVREIKDAETQVDRI-VSQQSSGGVTRSVEEIH-ELQSSISEQIRTLKNKITKL 854

Query: 757  RDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG---------- 806
              +++ M++ ++++++    LR +  +AA  L   K  + +++ L E+            
Sbjct: 855  TADRQRMKDQVNSLELEKSELRNKIGRAAGQLEKKKDLQNQIQSLKEDYTHQREVIQRTD 914

Query: 807  -QLDLDEKLLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIE 859
             +L+  E  + EA           + KE++++D  D                      I 
Sbjct: 915  EELEKLEPSITEARSARDETLRHGRSKEQVITDERDA-----------------ITSSIA 957

Query: 860  MLLKIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
             + K+ + I++Y D      L  ++R    L    S +E E+    +RT+++  ++D   
Sbjct: 958  EIKKMDNDIQDYVDRGGMTNLSSNQRALASLDTAISTTEKEIADLTVRTNKLKQDID--- 1014

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLER 972
                + D+ R+N  DNLNYR+    +D    +IE LE+R          E E        
Sbjct: 1015 ----SGDRKRKNFNDNLNYRKHLRTLDVLRKDIEDLEDRNAH-EDYERLEAEARSLENTA 1069

Query: 973  DRLLSEVNRCQGTMSVYQTNISR--NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            +RLL+E     GTM      + R   + D+    +KD   ++ +  I+++TT+ A +DL 
Sbjct: 1070 NRLLAERGSVMGTMKSKDEELGRLLQEWDM---DFKDAKHKYRESHIRVETTKAAIQDLT 1126

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKV 1089
            +  +A+DKA+M++H+MKME++N+I  ELWQ TY+G DID I I SD+E A   R+Y+Y++
Sbjct: 1127 QCGSAVDKAVMQYHSMKMEDVNRIASELWQTTYQGTDIDTILIRSDNETANNKRNYNYRL 1186

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
             M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA
Sbjct: 1187 CMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLA 1246

Query: 1150 AALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             +LHRI++ R+ Q NFQLIVITHDE F + +      + ++RV +D+ Q+S+I  + I
Sbjct: 1247 ESLHRIIKTRQQQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVKRDEKQNSVISRESI 1304


>gi|46107656|ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1]
          Length = 1976

 Score =  336 bits (861), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 339/1236 (27%), Positives = 613/1236 (49%), Gaps = 84/1236 (6%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++S L  +N   GE+   S R A MD  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDSSLVVVN--NGERTTTSTRQAQMDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K Q +++     KL+N     +A  K+ +    
Sbjct: 168  AALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLG----KLQN----DEAHNKVNKDRGD 219

Query: 124  DQEK-TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              EK  +AL+ +++   ++ + I  ++  T+  +K  R+  +    +     T  EQ + 
Sbjct: 220  RAEKRMKALQAEIEGSRETCESISAEMEETQEKIKTTRETANSHLAIVQNLDTKREQLEY 279

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            +  A+ +E++ T +EL +     E  +A  E  +  L+ + +    +   L++ +     
Sbjct: 280  REEAV-KELKSTIDELHDDDGKLESDLAHYEDRMQHLQDDADQNKAQYNELQKELGQSRK 338

Query: 243  EITNLLSEAGAHMSRMN--ERDSTIQKLFARHNLGSLPNAPF----SNEAALNFINRIRS 296
            E++  LSE G H S  +  ER   IQK   + +  S   + F    S     +F +R++ 
Sbjct: 339  ELSTKLSEQGKHQSDKDKYERQLKIQKEMIQESAQSYGFSGFDGDLSESQVKSFNDRLQK 398

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDR-WKNIEAQKQAKMEIKAGILKHIKEKE 355
             L++ +R+LE  +K +   L  A     +   R    I+ +  AK  + A I K     +
Sbjct: 399  LLAEKKRELERLQKENSSELDQATGVITELEGRKAARIQDRVSAKQRMSA-IEKRTAVLQ 457

Query: 356  NERDSFELQISNLNLSHIDERENKM--RIEVERKTNQLAEREFEINIRQKQSELFAMDQK 413
            NE  S ++ +     + +D +   +  R +  +KT + A+  ++  +  +  +L +++ +
Sbjct: 458  NE--SSQIDVDEGAKAVLDGQMQDLDSRFKTAQKTYENAD--WDRQLSDENDKLHSLESE 513

Query: 414  IKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDL 473
               L RE       + +R +L  ++ EL + K+K   +   +K K+  VL G     + L
Sbjct: 514  NDRLGRELVECTRLASERAQLDYRRKELNDRKRKLDTLTSTWKPKLDKVL-GSDWEPQTL 572

Query: 474  KKEITQALRA---LLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI 530
            + +    +R    ++ E      ++R+  ++V+      +E  D   K ++    +++ +
Sbjct: 573  ESKFQALVRGQNKVVAEAQKRRDQTRQKQQKVDFRLRTTKESRDK--KAKEAAACQQQVV 630

Query: 531  ESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPC 590
             + L   +  I  +D Y++ +++A+ + +  ++  ++ D +   +   +R+      C  
Sbjct: 631  NALLTVRDNAI--VDDYKEEVEAAESQVEELRNDLSLFDALVDYYTKCKRLLDTKRKCLL 688

Query: 591  CERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD-----SYFQQLDKLRMVYEEY 645
            C+R F   +E +    +R+ +    +H+       +  D     S  ++L  +R  Y+ Y
Sbjct: 689  CDRHF---DESQAAGMERL-SKRIDKHLDPKGKVDTEKDLKEMVSSLEKLRSVRGSYDTY 744

Query: 646  VKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
             +L+ E +P   +       E D   +  ++   +++  +  ++ +E + + V    +  
Sbjct: 745  ERLTAE-LPSLREECKTAEAEFDALERQVEEQASIVSTEEEKQKDLEDMSKTVANITQTI 803

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTK-DNLQNELEKLRDEQRYME 764
            ++I   + QVD +     S G   R+ +EI  EL  SLS +   L+N + KL  +++  +
Sbjct: 804  RDIAESETQVDRIMSQQMS-GGATRSPDEIH-ELQASLSDQMRTLKNRISKLTTDRQRTK 861

Query: 765  NDLSNIQIRWHTLREEKVKAANTL-------RDVKKAEEELEH----LMEEKGQLDLDEK 813
            + L+++++    LR +  +AA  L         ++  +EE+ H    +     +L+  E 
Sbjct: 862  DQLNSLELEKSELRNKISRAAGQLDKKQDLQNQIQALKEEVSHQRDVIQRADDELETIEP 921

Query: 814  LLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASK 867
             + EA           + KE+++ D  D                 N    +  +  + + 
Sbjct: 922  SITEARSARDEVLRRGRAKEQVIVDARD-----------------NVANSVNEMKMMDAD 964

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
            I+ Y D          Q   +  E  + S +    ++ V  ++ K  + N D+ ++NI+D
Sbjct: 965  IQGYIDRGGPSNLASNQRAIATLEKTIASTEKEVTDLTVRTNKLKQDIDNGDRKKKNIKD 1024

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMS 987
            NLNYR+    +D    EI  LEER          + E        +RLL+E     GTM 
Sbjct: 1025 NLNYRKNLRTIDVIRQEIAELEERNAD-EDYERLQAEARMQENHYNRLLAERGSVMGTMK 1083

Query: 988  VYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMK 1047
                 + R  +   +  YKD  K++ +  I+++TT+ A +DL +  +A+DKA+M+FH+MK
Sbjct: 1084 TKDEELGR-LLQEWEMDYKDAKKKYRESHIRVETTKAAIEDLAQCSSAVDKAVMQFHSMK 1142

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSDSEG-AGTRSYSYKVLMQTGDAELEMRGRCSA 1106
            M EIN+I  ELWQ TY+G DID I I SD+E   G R+Y+Y++ M   D E++MRGRCSA
Sbjct: 1143 MAEINRIAGELWQSTYQGTDIDTILIRSDNESNTGKRNYNYRLCMVKQDTEMDMRGRCSA 1202

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQ 1166
            GQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +LH I++ R+ Q NFQ
Sbjct: 1203 GQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHMIIKARQAQSNFQ 1262

Query: 1167 LIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            LIVITHDE F + +      + ++RV +D+ Q+S+I
Sbjct: 1263 LIVITHDEDFLRHMRCSDFCDSFFRVRRDERQNSVI 1298


>gi|400601812|gb|EJP69437.1| putative RAD50 protein [Beauveria bassiana ARSEF 2860]
          Length = 1307

 Score =  336 bits (861), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 334/1238 (26%), Positives = 600/1238 (48%), Gaps = 78/1238 (6%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVVN--NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            S LKK+FD+IF A +YTKA+E +K L K Q +E+   +    + +  KD   +  + ++ 
Sbjct: 168  SALKKRFDEIFEALKYTKAIENLKVLRKKQVEELGKLQNDEAHNKVNKDRGERAEKRMTA 227

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             Q + EA + + + +   +QD  DKI           ++   +  ++ +R  L E +Q  
Sbjct: 228  LQAEIEAAREKCEAITAEMQDTQDKIRQKREQANSFLQV---VQNLSNKREQL-EYRQDA 283

Query: 184  YAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAE 243
               L + I     EL     + E  + + E  + +   E N        L++++      
Sbjct: 284  VNELRQRIN----ELPEDDASLERQLTQYEESMRRQSEEANRNKIHYSELQEDLAKSRKS 339

Query: 244  ITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
            ++  L+E G H S       ++  R   +Q+   RH      +   ++     F ++I+ 
Sbjct: 340  LSTKLAEQGKHQSDKEKHERQLKMRMEMVQEAAQRHGFRGYDD-DLTDALIKQFNDKIQK 398

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKEN 356
              ++ +RDLE  +K +   L  A  +          +E QK A+ + +    + +   E 
Sbjct: 399  LFAEKKRDLERLQKENAAELDKASATI-------SELEGQKAARTQDRLSAKQRMGAIEK 451

Query: 357  ERDSFELQISNLNLSH-IDERENKMRIEVERKTNQLAEREFEI-----NIRQKQSELFAM 410
                 + + S +N+   +    +    E+E K +Q+ ++EFE      ++ ++ ++L+ +
Sbjct: 452  RTTVLQNESSLINVDEGLKAVLDGQLGELESKFSQV-QQEFETAAWDRHLTEENTKLWQL 510

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
            + +   L RE       + +R +L  +K EL + K K   + + +  K+  ++ G    +
Sbjct: 511  ESESDKLGRELIECTRLASERAQLDFRKKELSDRKLKLTTLTETWTPKLDKLIGGGWKPE 570

Query: 471  RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFI 530
             DL+ +    L A      +   +  +  ++   +  K++ + +   + +   +  K  +
Sbjct: 571  -DLEGKFQTLLAAQNKSLQEARQQQEQTRQKQAKVDYKLKTIKETYEQKQTQQNECKEQV 629

Query: 531  ESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPC 590
               L+S+      I+ Y + + + +++ +  +   ++ D ++  +   +R   A   C  
Sbjct: 630  LKALQSVRDSAV-IEDYPEEVSATEQQIETLRDDLSLIDALKDYYTKCKRALDAKKTCLL 688

Query: 591  CERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES----SNADSYFQQLDKLRMVYEEYV 646
            C+R F   ++++     R++A           +E+    S A S  Q L  +R  Y+ Y 
Sbjct: 689  CDRHF---DDNQTASIDRLRAKIDRHLNSKTKVEAEQDLSEASSTLQSLIAVRSQYDTYE 745

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVL----AQIKADKE---SVEVLVQPVE 699
            +L  E        L EL  E       ++ +  +L    A + A++E    ++ + + V 
Sbjct: 746  RLGNE--------LPELRNERKSIETDYESIERLLEEHDAAVTAEEERQRDLDDMSKTVS 797

Query: 700  TADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNL-QNELEKLRD 758
               +  +EIQ  + QV+ +     S G G R+ +EI  EL G++S +    +N + KL +
Sbjct: 798  NIGQTLREIQDSESQVERIASQQQSAGSG-RSADEIH-ELQGTVSEQMRASKNRVAKLTN 855

Query: 759  EQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEA 818
            +++   + +S +++    LR      +  L   +  + ++ +L EE   L    + +  A
Sbjct: 856  DRQRARDQISALELEKSELRNRISLTSGQLDKKEDLQGQIHNLKEE---LAHQREAIQRA 912

Query: 819  SGPLSKEKEKLLS--DYNDLKVKLNREYEEQ-AEQKINFQQEIEMLLKIASKIKEYYDLR 875
               L K + ++       D  +K  RE E+   E + +    I  +  I S I++Y D  
Sbjct: 913  DQELEKVEPRITEARSIRDDTLKRGREKEQAITENRDSVATSINEIKMIESDIQDYEDRG 972

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
                    Q   +  E  + + +    E+    ++ K  + N D+ + NI DNLNYR+  
Sbjct: 973  GASNLASNQRAIAALEQTITTTEAEITELTQRTNKLKQDIDNGDRTKENINDNLNYRKHL 1032

Query: 936  AKVDKFASEIESLEERVLKIGGVSTFETELGK-HLLER--DRLLSEVNRCQGTMSVYQTN 992
              ++    EI+ LE R         +E   G+   LE   +RL +E     G M     +
Sbjct: 1033 RTLEVLRDEIDELENR----NAHEDYERLQGEARALENQSNRLFAERGSVMGAMKTKDED 1088

Query: 993  ISRNKIDLKQAQ--YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
            + R    LK+ +  YKD  +++ +  I+++TT+ A +DL +  +A+DKA+M+FH MKM E
Sbjct: 1089 LDRL---LKEWEMDYKDAKQKYRESHIRVETTKAAIEDLAQCGSAVDKAVMQFHAMKMAE 1145

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQK 1109
            +N+I  ELWQ TY+G DID I I SD+EG  G R+Y+Y++ M   DAE++MRGRCSAGQK
Sbjct: 1146 VNRIAGELWQSTYQGTDIDTILIRSDNEGTTGRRNYNYRLCMVKQDAEMDMRGRCSAGQK 1205

Query: 1110 VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIV 1169
            VLAS+I+RLALAE+F +NCG++ALDEPTTNLD  N +SLA +LH I+  R+ Q NFQLIV
Sbjct: 1206 VLASIIVRLALAESFGVNCGLVALDEPTTNLDRDNIKSLAESLHAIIRARQAQSNFQLIV 1265

Query: 1170 ITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            ITHDE F + +      + ++RV +D+ Q+S+I  + I
Sbjct: 1266 ITHDEEFLRHMRCSDFCDSFFRVKRDEKQNSVISRESI 1303


>gi|302924127|ref|XP_003053819.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734760|gb|EEU48106.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1955

 Score =  335 bits (859), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 340/1264 (26%), Positives = 612/1264 (48%), Gaps = 140/1264 (11%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVVN--NGERTTTSTRTAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            + LKK+FD+IF A +YTKA++ +K L K Q +++     KL+N     +A  K+ +    
Sbjct: 168  AALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLG----KLQN----DEAHNKVNKDRGD 219

Query: 124  DQEK-TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
              EK   AL+  ++      + I  ++ +T+  ++++R+  +    +    +T  EQ + 
Sbjct: 220  RAEKRMNALQEDIEGARAKCESISTEMDNTQEIIREIRETANSHLAIVQNLNTKREQLEY 279

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
            +  A+ +E++ T +EL       E  +A  E  +  L+ E +   T+   L+  +     
Sbjct: 280  REEAV-KELKATIDELPEDDARLESDLAHYEDRMQHLQEEADQNKTQYNELQNELARSRK 338

Query: 243  EITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIR 295
            +++  LSE G H S       ++  R   IQ+    +      +   S+    +F +R++
Sbjct: 339  DLSAKLSEQGKHQSDKDKYERQIKTRMEMIQEAAQTYGFSGF-DGDLSDHQVKSFNDRLQ 397

Query: 296  SRLSDLERDLEDKKKSDELALKMAWDSYLDANDR-----WKNIEA-QKQAKMEIKAGILK 349
              L++ +RDLE  +K + + L  A     +   R        + A Q+   +E +  +L 
Sbjct: 398  KLLNEKKRDLERLQKENSVELDRATGVITELEGRKAARTQDRVSAKQRMTAIEKRTAVLH 457

Query: 350  H----IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQS 405
            +    I   E  +   + Q+ +L+           R +  +K  + A+  ++  +  +  
Sbjct: 458  NESGLIDVDEGAKAILDGQMQDLD----------SRFQTSQKAFENAD--WDNQLSTEND 505

Query: 406  ELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKG 465
            +L  ++ +   L RE       + +R +L  +K EL + K+K   +   +K K+  ++  
Sbjct: 506  KLHQLENESDKLGRELVECTRLASERAQLDYRKKELADRKRKLDTLTSTWKAKLDKIIGS 565

Query: 466  RLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
                                 E + L SK +   K+ N + M  Q+  D   + ++ V+ 
Sbjct: 566  DW-------------------EPESLDSKFQLVVKDQNKVVMDAQKRRDQTRQKQQKVEF 606

Query: 526  KKRFIESKLE-------SLNQQIFS----------IDTYQKVLDSAKEKRDVQKSKYNIA 568
            + R  +  L+       S  QQ+            ++ Y + +++A+++ +  ++  ++ 
Sbjct: 607  RMRTAKESLDRKSKEATSCQQQVVDALQTVRDNAIVEDYTEEVETAEQQVEELRNDLSLF 666

Query: 569  DGMRQMFDPFERVARAHHVCPCCERPF---SAEEEDEFVKK--QRVKAASSAEHMKVLSL 623
            D +   ++  +R+  +   C  CER F    A   +   KK  + +      +  K L  
Sbjct: 667  DALVDYYNKCKRMLDSKRKCLLCERHFDDNQAASLERLSKKIEKNLDPKGKVDTEKDLK- 725

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQ 683
                A +  ++L  +R VY+ Y +LS E +P        +  E D   +  ++   V++ 
Sbjct: 726  ---EAVASLEKLRSVRSVYDTYERLSAE-LPSLRDECKAVEVEFDALERQLEEQTSVVSA 781

Query: 684  IKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL 743
             +  ++ +E + + V    +  ++I   + QVD +     S G   R+ +EI    +G  
Sbjct: 782  EEEKQKDLEDMSKTVMNITQTVKDIGESETQVDRIMSQQMS-GGATRSPDEIHELQAGVS 840

Query: 744  STKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLME 803
                +L+N + KL  +++ M++ LS +++    LR +  +AA  L   K  + +++ L E
Sbjct: 841  EQMRSLKNRISKLTTDRQRMKDQLSALELEKSELRNKISRAAGQLDKKKDLQNQIQVLKE 900

Query: 804  EKG-----------QLDLDEKLLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEE 846
            E             +L+  E  + EA           + KE++++D  D           
Sbjct: 901  ELSHQREVIQRADEELESIEPSINEARSARDDVLRRGRSKEQVIADTRD----------- 949

Query: 847  QAEQKINFQQEIEMLLKIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKI 899
                  N   E++M+    + I++Y D      L  ++R    L++  + +E EV    +
Sbjct: 950  ---SVANSVSEMKMM---DTDIQDYIDRGGPSNLASNQRAIATLEKTIANTEKEVTDLTV 1003

Query: 900  RTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVS 959
            RT+++  ++D       N D+ ++NI DNLNYR+    V+    EI  LE+R        
Sbjct: 1004 RTNKLKQDID-------NGDRKKKNIRDNLNYRKNLRTVEVIRGEISELEDRNAD-EDYE 1055

Query: 960  TFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQL 1019
              + E   H    +RLL+E     G M      + R  +   +  YKD  +++ +  I++
Sbjct: 1056 RLQAEARAHEDHYNRLLAERGSVMGAMKTKDEELGR-LLQEWEMDYKDAKRKYRESHIRV 1114

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
            +TT+ A +DL +  +A+DKA+M+FH+MKM E+N+I  ELWQ TY+G DID I I SD+E 
Sbjct: 1115 ETTKAAIEDLAQCSSAVDKAVMQFHSMKMSEVNRIAGELWQSTYQGTDIDTILIRSDNES 1174

Query: 1080 A-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
            + G R+Y+Y++ M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTT
Sbjct: 1175 STGKRNYNYRLCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTT 1234

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  N +SLA +LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +D+ Q
Sbjct: 1235 NLDRDNIKSLAESLHMIIKARQAQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVKRDERQ 1294

Query: 1199 HSII 1202
            +S+I
Sbjct: 1295 NSVI 1298


>gi|113913515|gb|ABI48901.1| RAD50 [Saccharomyces pastorianus]
          Length = 1312

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 363/1263 (28%), Positives = 620/1263 (49%), Gaps = 122/1263 (9%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L  IN ++G++  LS R  ++D +VP  +GV KAILE VIF HQ+++ WPL +
Sbjct: 109  FKTLEGQLVAIN-NSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSE 167

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LKKKFD+IF A ++TKAL+ +K + KD + +IK  K  +E+L+  KD +  ++ +I 
Sbjct: 168  PSNLKKKFDEIFQAMKFTKALDNLKSIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIH 227

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            Q Q K +    ++ ++E  + +I ++      + +D +K+  ++  +   ++++ +Q ++
Sbjct: 228  QLQSKIDQFNAEVSQIEAQLNEITEQSDKLFKSNQDFQKILSKVENLKNSKTSIRDQVER 287

Query: 183  QYAALAEEIEDTD---EELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDA 239
                L+  IE  D    +LKN   NF  ++ ++   +  LE   +++  +   L+ + ++
Sbjct: 288  ----LSNSIEILDLSKMDLKNLLANFSKVLTEKNHQLKDLEMNISNLKNQQSSLQNHSNS 343

Query: 240  YTAEITNLLSEAGAH---MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
                   L +   A+   +S +       Q+ F   +  +  +   +N+    F  RI  
Sbjct: 344  LIRRQGELEARKEAYEKNLSHLASLKEDFQQRFQHLSDNNNSDMVKTNQEMSQFQVRIFQ 403

Query: 297  RLSDLERD-----LEDKKKSDELALKMAWDSY-LDAN--DRWKNIEAQKQAKMEIKAGIL 348
             LS+         L  +    EL   +  DS  L+ N  DR K I   ++   E++  +L
Sbjct: 404  DLSNTAEQFAKEILIKETNVSELVKSITVDSQNLEYNKKDRTKLIHDTEELTEEVR--LL 461

Query: 349  KHIKEKENERDSFELQISNLNL--SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSE 406
            K++    + +D    ++ NLN     +   EN   I   + T ++ E+  E+ I + Q E
Sbjct: 462  KNL----STQDDLNHELENLNTYKGKLQAWENDNTIP--KLTQKIEEKNNEMIILENQIE 515

Query: 407  LFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGR 466
             F    +I   N++ D+ A     R  L +K  +L+N  +K +K       KIR +    
Sbjct: 516  KFQ--DRIMKTNQQADLYAKLGLVRKSLNVKSGDLQNIIEKLQK-----DPKIRQIF--- 565

Query: 467  LPLDRDLKK-EITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
             P+ +D +K ++    + L   F ++       +KE++    K      N +   KD+  
Sbjct: 566  -PITQDFQKSDLEIDFQKL---FINMQKNIAVNNKEIHEFDRKYTNALYNSNTIEKDLHD 621

Query: 526  KKRFIESKLESLNQQI---FSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFER-- 580
                 +  ++ LN+ +    +ID Y  VL+  +     + +  N+   M Q    F R  
Sbjct: 622  NLHSQQKVIQLLNENLPEDCTIDEYNDVLEETE--LSYKTALENLK--MHQTTLEFNRKA 677

Query: 581  --VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLESSNADSYFQQLD 636
              +A     C  C R F   E + F  K  Q +K  + A   K L     N   Y   LD
Sbjct: 678  LEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKETVQNEKEY---LD 731

Query: 637  KLRMVYEEYVKLSK--ETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVL 694
             LR++ +  + L+   + I  A++ L +  EE        D +      +K +KE  E  
Sbjct: 732  SLRLLEKHIISLNSLCQKIENAQEALDKAKEETKASKTKLDLLETKSTTLKNEKEFAESE 791

Query: 695  VQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELE 754
            ++P      L ++    +++V +LE+          + + I  ELS   +++D ++  ++
Sbjct: 792  IRP------LIEKFIYLEREVKELEH----------SSKTISDELSIYNTSEDGIKT-VD 834

Query: 755  KLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE----ELEHLMEEKGQ 807
            +LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E    E+E  +  K  
Sbjct: 835  ELRDQQRKMNDSLRELRKNISDLQMEKDEKVRENSRMINLIKEKELNVSEIESSLTRKQN 894

Query: 808  LDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNRE------YEEQAEQKINFQQEI--- 858
            +D   KL       +    E L S    L+ K N         + + + +IN +Q+I   
Sbjct: 895  IDNSIKLKKANIKDIDSRIEALESQIISLQNKKNEAQNVLDITKNERDLQINNKQKIVAD 954

Query: 859  --EMLLKIASKIKEYYDLRKDERFKELQEKKSQSES---EVKSCKIRTDEILVELDRFKD 913
               ++ +  +   E  D  +   F ELQ+   + ES   ++K  K + D  L E++  K 
Sbjct: 955  VNRLIDRFQTIHNEAIDF-ESRGFNELQKTVIELESNKVQMKELKEQLDSRLNEMNEEKR 1013

Query: 914  IVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD 973
             + + +   +N++ NL   E K+++    +EI  L+        V   E E  K+  E  
Sbjct: 1014 KLADSNNEEKNLKQNLELIELKSQLHNIEAEINELD--------VQNAEAERDKYQEESL 1065

Query: 974  RL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN 1026
            RL      LS  N  + G M   Q  I      L+   YKD++K +  + ++L+T     
Sbjct: 1066 RLRTNFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDVEKSYHKEWVELQTRSFVT 1124

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGTRS 1084
             D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID I+I SD  S     +S
Sbjct: 1125 DDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTVKGKS 1184

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y+V+M   D EL+MRGRCSAGQKV+AS+IIRLAL+ETF  NCG++ALDEPTTNLD  N
Sbjct: 1185 YNYRVVMYKQDVELDMRGRCSAGQKVIASIIIRLALSETFGANCGVIALDEPTTNLDEEN 1244

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
             ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      + +++V +DD Q S IE 
Sbjct: 1245 IESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTDHFFKVKRDDRQKSQIEW 1304

Query: 1205 QEI 1207
             +I
Sbjct: 1305 VDI 1307


>gi|302309004|ref|NP_986184.2| AFR637Wp [Ashbya gossypii ATCC 10895]
 gi|299790898|gb|AAS54008.2| AFR637Wp [Ashbya gossypii ATCC 10895]
 gi|374109416|gb|AEY98322.1| FAFR637Wp [Ashbya gossypii FDAG1]
          Length = 1296

 Score =  334 bits (857), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 346/1244 (27%), Positives = 627/1244 (50%), Gaps = 113/1244 (9%)

Query: 11   QTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKF 70
            Q +  + GE+  LS R AD+D++VP  +GV KAILE VIF HQ+++ WPL +P+ LKK+F
Sbjct: 115  QLVAINRGERTTLSTRAADLDQQVPIYLGVPKAILEYVIFCHQEDSLWPLSEPANLKKRF 174

Query: 71   DDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEA 130
            D+IF A ++TKAL+ +K + KD A +IK  K  +E+L+  +D +  ++ SIS+ + K + 
Sbjct: 175  DEIFQAMKFTKALDNLKGIKKDMAIDIKLLKQSVEHLKIDRDRSRAIKRSISELEHKVKD 234

Query: 131  LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEE 190
             ++ + E+E+ +++I ++      + +  +++  +I ++   R ++  Q Q+    L + 
Sbjct: 235  YQSTVPEIERQLKEITEQSDKLFYSNQQFQQVLSKIDSLGHSRDSIGNQIQR----LQDS 290

Query: 191  IEDTD---EELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNL 247
            IE  D   E+L +   NF   +A++E  I+++E E    D +   L+ N   Y +    L
Sbjct: 291  IEPLDMDREKLVDLLENFSSSLAEKEEAINRMEIEAAAADDE---LQSNKATYES----L 343

Query: 248  LSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL----NFINRIRSRLSDLER 303
            LSE+    S+  E +     L    N   L +   + E +L    + I +  +++SDL  
Sbjct: 344  LSESAVLKSKQKEYEKNRDLLTELTN--QLASEGINTEDSLGCIESMIQKAETKISDLR- 400

Query: 304  DLEDKKKSDELALKMAW-DSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFE 362
             L+ +K+ +E   +++   + L   ++  +     +AK+  +   LK    + +E +S E
Sbjct: 401  -LKHQKELNEAQERLSGKQNELIREEQKLSYTKDDRAKLNDQLMTLKQKLARISETES-E 458

Query: 363  LQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKD 422
            L+IS  +L        K R+E+ +K N  A   F   I+ K  E+  ++  ++ +  +  
Sbjct: 459  LEISKQDLEKY-----KPRVEMWQKEN--AVDRFNEEIKSKNDEMLLLENDVEKVQIQIS 511

Query: 423  VLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALR 482
                 SE   K +L K  + + K++ ++ I ++K        G + +D D + E  +   
Sbjct: 512  NANQHSELLAKYSLLKTSVVSKKQQLEEAISKFKADEHSKFLG-IEIDDDFELEFKKKYI 570

Query: 483  ALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIF 542
            ++  +    S  + E  +  +  +   + +  +L   +  +   K     KL+    +  
Sbjct: 571  SIQKQLAQASRNASEIKETYSEKEFTAKNIESDLVGVKTAISECKE----KLQMAMPEDC 626

Query: 543  SIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-D 601
            +I+ Y++++  ++E   V      +     +       +A   + C  C R F  + E  
Sbjct: 627  TIEEYEELVQESEESYKVALENLKMHRTTLEFNQKALEIAETTNCCYLCRRNFDKDSERS 686

Query: 602  EFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKN 659
            + +++ + +  ++ E     +LE +  D   Q L  LR + ++ V L   K      EK+
Sbjct: 687  KLIEELKSRTNTAFEK----TLEDTLNDEK-QYLASLRALEKDIVNLRSLKMRAVTQEKH 741

Query: 660  LHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLE 719
            L E   +L +     +D     ++++  +E  E  ++P      LF +I   QK++  +E
Sbjct: 742  LQEAKLQLGKNKAQHEDAQRQYSKLRETQEHFEQRLRP------LFHDIIRLQKELAQVE 795

Query: 720  Y----------MLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSN 769
                       +     +GV T+EE+Q + +        L+ E+ +L++E+     + +N
Sbjct: 796  GEYGRLSDEVKIYGGSSEGVYTVEELQRKQTNINERLRVLRKEVGRLQEEKERKATEFNN 855

Query: 770  IQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLD-----------EKLLAEA 818
            +      +RE+  K             E+E  ++EK Q+  D           + +L +A
Sbjct: 856  L---VALVREKTFKVT-----------EMEKQLQEKQQIQKDAVGIELSIGNMDGILLDA 901

Query: 819  SGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQ------KINFQQEIEMLLK-IASKIKEY 871
               L    E+L ++ + LK  L     EQ+E+      ++N  +   M LK +   +KE+
Sbjct: 902  ETVL----ERLAAEVSTLKTTLASIRNEQSEKDSQEARQLNGLKTKYMQLKGVIDSMKEF 957

Query: 872  YDLRKDERFKELQE--KKSQSESEVKSCKIRT--DEILVELDRFKDIVRNQDQIRRNIED 927
             D+   +R  ++     +SQ +SE  + +I T    I  E  + KD    Q    +N++ 
Sbjct: 958  DDVH-SKRLVDVTALLTRSQQDSEELTKRINTLGKRIAKENQKLKDSTNEQ----KNMKL 1012

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMS 987
            NL+  + K+++ + + E+  L+ R  +      ++ E  K   E ++L SE     G + 
Sbjct: 1013 NLDLIDLKSQMKEISEELVRLDARSAE-AQRDKYQQESMKLRTEFEKLSSENAGKLGEIK 1071

Query: 988  VYQTNIS--RNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
              Q  I+   N++   Q++Y+D+D R+  +  +L+T  +   D+D Y   LD A+M++H 
Sbjct: 1072 QLQNQIALLTNQL---QSEYRDVDDRYQQEWAKLQTKTLVTDDIDTYSKVLDSAIMKYHG 1128

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGR 1103
            +KME+IN+II ELW++TY G D+D I+I SD   + TR  SY+Y+V+M   DAEL+MRGR
Sbjct: 1129 LKMEDINRIIDELWKRTYSGTDVDSIKIKSDEVNSTTRGKSYNYRVVMYKQDAELDMRGR 1188

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+IIRLAL+ETF  NCG++ALDEPTTNLD  N  SLA +L  I++ R+ Q+
Sbjct: 1189 CSAGQKVLASIIIRLALSETFGTNCGVIALDEPTTNLDEENISSLARSLSNIIKFRRHQK 1248

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NFQLIVITHDE+F   +      + +++V +D+ Q S IE  +I
Sbjct: 1249 NFQLIVITHDEKFLDHMNAVNFTDHFWKVKRDERQTSQIEMVDI 1292


>gi|336273776|ref|XP_003351642.1| RAD50 protein [Sordaria macrospora k-hell]
 gi|380095921|emb|CCC05968.1| putative RAD50 protein [Sordaria macrospora k-hell]
          Length = 1317

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 342/1262 (27%), Positives = 610/1262 (48%), Gaps = 143/1262 (11%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G++  +S R  ++D+ VP  +GVS A+L+ VIF HQDE+ WP+  P+ LKKKFD+IF A 
Sbjct: 122  GDRQLISTRVMELDKLVPEKLGVSPAVLDAVIFCHQDESLWPMSAPADLKKKFDEIFEAQ 181

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +Y K +E +K L K + +E++  K++    +  K+ A ++   +S+       L  ++QE
Sbjct: 182  KYAKVIENLKLLKKKKGEELRILKVQEAQDKENKERADRVDRELSK-------LTREIQE 234

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQY-----AALAEEIE 192
                  ++ D+I H ++ +K  +K +   S +        +Q++ +Y     A L E IE
Sbjct: 235  ARDKCNELLDQIEHEDVRIK--QKWEQANSFLRIVNELQTKQEKLEYKKDAIAELRERIE 292

Query: 193  DT---DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI-KFLEQNIDAYTAEI--TN 246
            ++   DE L++  N +E  V          ER   D D K+ +F     +  TA +  T 
Sbjct: 293  ESTGSDEYLRDALNQYEQTV----------ERMNTDRDQKVAQFGTLQTELKTARVKHTA 342

Query: 247  LLSEAGAHMSRMNERD-------STIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLS 299
               E G H S  ++ D         IQ+   +H +    +    ++    F  RI+  L 
Sbjct: 343  KAEEQGKHQSDKDKYDRQLVSQRQMIQEAAEKHEIRGY-DGDLDDQEINAFYERIQKMLQ 401

Query: 300  DLERDLE--DKKKSDELALKMAWDSYLDAND----RWKNIEAQKQAKMEIKAGILKHIKE 353
            D +R+LE   +  + EL  K A  + L++      R +   +Q+ A ++           
Sbjct: 402  DTKRNLERLQRDNAAELDAKSAVITELESRKASRIRDRKTSSQRVATLQ----------- 450

Query: 354  KENERDSFELQISNLNLSHIDERENKM----------RIEVERKTNQLAEREFEINIRQK 403
                RD  +LQ  +LN   +DE    +          RI+  +  N++AE   +  I++ 
Sbjct: 451  ----RDITKLQ-GDLNNLDVDEGAEAVLRTEMKGLESRIKQAKADNKVAE--LDSQIKEL 503

Query: 404  QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVL 463
             +E+  ++ +   L+RE       + +R +L L+K +L+  K +   +   +  ++ +V+
Sbjct: 504  NNEVLTLEAQGAKLSRELVECTNLAAERAQLELRKNQLKERKGELDILKSTFNQQLTEVI 563

Query: 464  KGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDV 523
             G+  +   ++ +  +ALR L     +L        +E+  ++ K+    +  +K  K+ 
Sbjct: 564  -GKDWISETIETDFQKALRRLSDRLSELRKTKDSTQQELKQVEFKLTTAREKQTKSVKER 622

Query: 524  DSKKRFIESKLES-----LNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF 578
            DS K+ +   +E      +  +  S+D Y + +   +++  +  +   + + + + F   
Sbjct: 623  DSCKKDVYGAVEKAATKEMLARGVSVDDYAETVAEIEKELKIIDTDMELDEYLTEYFTSA 682

Query: 579  ERVARAHHVCPCCERPFSAEE-EDEFVKKQRVKA--ASSAEHMKVLSLESSNADSYFQQL 635
            +  A     C  C++  + E+   + +KK R K       E +K    E +        L
Sbjct: 683  KEAAEEKKTCYLCDQSLANEKVMQKLMKKIRKKLDDKHKDEQLK----EQAMFRRLLGTL 738

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              +R  YE Y +L KE +P   + ++ LT E ++  +  +D  G     +  + + + L 
Sbjct: 739  RSVRTKYETYGRLCKE-LPGLVEEINTLTSEKERLVRQLEDQDGTFKAAEEKRNAADGLS 797

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
            + V    +  ++I  +++QV   E    +    VR+ +EI  + +         Q +L K
Sbjct: 798  KSVLKIAQAVKDIADFERQV---ERSQQNSSIQVRSADEINDDQTACAEQLRITQAKLTK 854

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL-----DL 810
            L  E++ +++  + +++    L+ +  +    L   K+ ++ +++  EE+ +L     D+
Sbjct: 855  LTAERQRLKDQAAQLEVEKLELKHKITEVVQQLEHKKRLQDTIKNHKEEQNELRKNMQDI 914

Query: 811  DEKL------LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQ-AEQKINFQQEIEMLLK 863
            D+++      +A A   L + +            K  R  E++ AE++      +  L  
Sbjct: 915  DKEVESIDPEIASARAALEESR------------KQGRAREQRIAEERDGIATTVSELKM 962

Query: 864  IASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRR 923
            I  +I++Y D          Q   +  E+ + + +    E+  ++ +    + N D  RR
Sbjct: 963  INREIQDYLDRGGPANLASNQRAIASLENTIATLERDMKELTTQIHKLNKEIDNSDAKRR 1022

Query: 924  NIEDNLNYRETKAKVDKFASEIESLEERVLK------IGGVSTFETELGKHLLERDRLLS 977
            NI DNL YR+   + D    EIE L  R  +      +      E+  GK   +RDRL+ 
Sbjct: 1023 NIADNLTYRKNLRERDALEEEIEELVSRNAQEDYDRLVKEAHYLESRRGKLNADRDRLM- 1081

Query: 978  EVNRCQGTMSVYQTNISR----NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
                  G+MS      +R     +I+LK A+      R  +  I+++TT+ A +DL R  
Sbjct: 1082 ------GSMSTKDEQFARLNDEYEIELKGARA-----RFKESHIKVETTKAAIEDLARGM 1130

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--------SEGAGTRSY 1085
             ALD+A+M++H++KMEEIN+ I ELWQ TY+G DID I+I SD        + G   R Y
Sbjct: 1131 VALDQAIMQYHSLKMEEINRTIGELWQSTYQGTDIDTIQIRSDMDSSASGGASGNTRRIY 1190

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V M  GD E++MRGRCSAGQKVLA +IIRLALAE+F LNCG++ALDEPTTNLD  N 
Sbjct: 1191 NYRVSMIKGDTEMDMRGRCSAGQKVLACIIIRLALAESFGLNCGLIALDEPTTNLDSDNI 1250

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
             SLA +LH I++ RK Q N QL+VITHDE F + +   +  + ++RV +D++Q+S+I  +
Sbjct: 1251 RSLAESLHAIIKARKSQNNLQLVVITHDEEFLKHMQCSEFCDDFFRVKRDENQNSVISRE 1310

Query: 1206 EI 1207
             I
Sbjct: 1311 NI 1312


>gi|367051913|ref|XP_003656335.1| hypothetical protein THITE_2120798 [Thielavia terrestris NRRL 8126]
 gi|347003600|gb|AEO69999.1| hypothetical protein THITE_2120798 [Thielavia terrestris NRRL 8126]
          Length = 1311

 Score =  332 bits (850), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 334/1246 (26%), Positives = 596/1246 (47%), Gaps = 123/1246 (9%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S R  ++D+ VP  +GVS A+L+ VIF HQDE+ WP+ +P+ LKK+FD+IF 
Sbjct: 120  NNGERHLISTRVMELDKLVPEKLGVSPAVLDAVIFCHQDESLWPMSEPAALKKRFDEIFE 179

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQM 135
            A +YTK ++ +K L K + +E+   KL     Q   D          Q++EK + +   M
Sbjct: 180  AMQYTKLIDNMKVLRKKKGEELSRLKL-----QETHD---------KQNKEKADEVDRLM 225

Query: 136  QELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAAL-------- 187
              L + IQ+  D+ +        L+KM ++    +AR    +EQ     A +        
Sbjct: 226  SRLTREIQEARDRCNEL------LQKMDEE----SARIKDKYEQANSFLAVMNNLQTKKE 275

Query: 188  ---------------AEEIEDTDEELKNWKNNFE----GIVAKRESDISKLEREKNDMDT 228
                            EE+  TD+ L+   N +E      V+ R+S  ++     + +  
Sbjct: 276  KLEYKNEAIEVLRGRIEELPQTDQVLETILNEYEETYQHTVSARDSKAAQF----HQLQA 331

Query: 229  KIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
            ++K   +   A  AE     S+   +  ++  RD  I     RH +    +    +    
Sbjct: 332  ELKLAREQHTAKAAEQGKHQSDKDKYERQLETRDRMIHDAATRHEIRGY-DGDLDDRRIA 390

Query: 289  NFINRIRSRLSDLERDLE--DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG 346
             F  RI+  LSD +R+LE   +  +DE   K A        DR    E++K + +  ++ 
Sbjct: 391  AFNERIQKILSDKKRELERLQRDNADEFDKKTAI-----ITDR----ESRKASLIRDRSS 441

Query: 347  ILKHIKEKENERDSFELQISNLNLSHIDE-------RENKMRIEVERKTNQLAEREFEIN 399
              + I     E  + + ++S+L++    E       +E + RIE+ +   Q A+   +  
Sbjct: 442  AKQRIVTVGKESATLQAELSSLDIDEGTEAVLRTEMKELEARIEMTKTEEQRAD--LDAQ 499

Query: 400  IRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKI 459
            I++   +++ ++ +   L RE       + +R +L L+K +L   +++   +   ++ ++
Sbjct: 500  IKKANDDIYRLEAQSSKLARELVECTRLASERAQLDLRKKQLTERRRELDILKSTWEAQL 559

Query: 460  RDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKI---QEVTDNL 516
              +L      D  ++ E   AL+   TE  +   +     +E+  ++ K+   +E  + L
Sbjct: 560  SALLGSDWQPD-TIETEFQNALKRQNTEVAECRKQKDATQQELKQVEYKLSNARERHNRL 618

Query: 517  SKHRKDVDSKKRFIESKLESL-NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMF 575
            S  ++D    KR +   L+ + N     I+ Y K ++S + +    ++   + D M++ +
Sbjct: 619  STEKEDC---KRAVTKALKDVRNPDSPPIEDYTKEVESIEAELGQTETDLKLYDEMKKHY 675

Query: 576  DPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQL 635
                  A   + C  CER F  +   +     ++    + E  + L  +  +     + L
Sbjct: 676  VSIRDRAVRFNKCYYCERDFKDQPAAKSKLLDKIAKKLNDEDKQELMDDQVHFTDQLKTL 735

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
              +R  Y+ +++L  E +P   K +   + + +   +  +D      + +  ++ ++ L 
Sbjct: 736  RAVRSQYDTFLRLEAE-LPSLNKEISLASSQREGLIRRLEDQDLAFREAEDKRQEIDALS 794

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
            + V    +  ++I   ++QV   E    S    +R+ +EI  E +         Q ++ K
Sbjct: 795  KHVLKISQTHKDIMDAERQV---ERSQQSSSITMRSPDEINEEQTACAEQTRLAQAKVSK 851

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLL 815
            L  E++ +++  + +++    L+ +   A   L   K  +E +    EE+ QL       
Sbjct: 852  LTTERQRLKDLAAQLEVERLELKHKISTAVQRLERKKSLQESIRRCKEEQSQL------- 904

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKL------NREYEEQ-AEQKINFQQEIEMLLKIASKI 868
             +A     KE E+L  +    +  L       R  E++ AE++      +  L  I S+I
Sbjct: 905  RDAVQEADKEIERLEPEIASARAALEEARQQGRAKEQKVAEERDGLATTVSELKMINSEI 964

Query: 869  KEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDN 928
            ++Y D          Q   +  E+ +++ +    ++ V++++    + N +  +RNI DN
Sbjct: 965  QDYLDRGGPSNLASNQRAIASLETTIENLESEARDLTVQINKLTKDIDNSNAKKRNIADN 1024

Query: 929  LNYRETKAKVDKFASEIESLEERVLKIGGVSTFE--TELGKHL-LERDRLLSEVNRCQGT 985
            L YR+   + +   +EIE L+ R         ++  T+  ++L   R +L +E  R  G+
Sbjct: 1025 LTYRKNLREREVLQAEIEELQSR----NAHEDYDRLTQEARYLESSRAKLAAERERLMGS 1080

Query: 986  MSVYQTNISR----NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALM 1041
            M+      +R     +I+LK A    +DK + +  + ++TT  A +DL     ALDKA+M
Sbjct: 1081 MASKDAEFARLNDQYEIELKGA----LDK-YLETHVLVETTRAAIEDLGVGVTALDKAIM 1135

Query: 1042 RFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-----GAGTRSYSYKVLMQTGDA 1096
             FH+MKMEEIN  I ELWQ TY+G DID I+I SD E     G G R+Y+Y+V M  GD 
Sbjct: 1136 HFHSMKMEEINNTIGELWQSTYQGTDIDTIQIRSDVEAGAGSGPGRRNYNYRVSMIKGDT 1195

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N  SLA +LH I+
Sbjct: 1196 EMDMRGRCSAGQKVLASIIIRLALAESFGINCGLIALDEPTTNLDSDNIRSLAESLHAII 1255

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            + R+ Q N QLIVITHDE F + +      + +YRV +D+ Q+S+I
Sbjct: 1256 KARRSQSNLQLIVITHDEEFLKHMQCSDFCDDFYRVKRDEKQNSVI 1301


>gi|345565516|gb|EGX48465.1| hypothetical protein AOL_s00080g94 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1319

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 344/1233 (27%), Positives = 598/1233 (48%), Gaps = 98/1233 (7%)

Query: 19   EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATR 78
            ++  +S +C ++D  +P  +GVS++IL+NVIF HQ+E+ WPL + S LKKKFD+IF A +
Sbjct: 129  QRSTVSTKCVELDSMLPNFLGVSRSILDNVIFCHQEESMWPLSEASVLKKKFDEIFEAQK 188

Query: 79   YTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQEL 138
            YTKA++ IK L K QA+EIK   L  +  +  K+ A +  +   Q   + E L+ Q +EL
Sbjct: 189  YTKAIDNIKTLRKKQAEEIKRLNLLQDQFKVDKERAERAEKKTKQISSEIENLREQREEL 248

Query: 139  EKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRS--TLFEQQQKQYAALAEEIEDTDE 196
             + I  I ++I   E+  +     +  I+ +T +RS      +         + + D+DE
Sbjct: 249  SREISKIREEI---EVLWQTTASFEKDIAVLTTKRSDHQRISELIDDLQDDIDLLPDSDE 305

Query: 197  ELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMS 256
             L++   NF+  + K E+ I+  ER K ++  +   L   ++    +   L +    +  
Sbjct: 306  ALEDRLANFKDEMDKFEAKITDKERHKIEIKEEQGRLRVKLNKKADQKGTLQARKEHYED 365

Query: 257  RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELAL 316
            ++  R++ I++  A H +         +    +F+ +       LE+   ++  + E A 
Sbjct: 366  QLMNRENMIKEASALHEIRGFSAGDLDDRQVADFMRK-------LEQLTREQSGTYERAK 418

Query: 317  KMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI--SNLNLSHID 374
            +   +  L A++    +  QK   +E      K     E +R + EL+     L+   +D
Sbjct: 419  REGKEEQLQASNALNTLN-QKLLSLEQT----KRFATTEIDRLNSELRALQKGLDRLQVD 473

Query: 375  E-RENKMRIEVERKTNQLAE-------REFEINIRQKQSELFAMDQKIKALNREKDVLAG 426
            E R  ++ IEV    ++++E       ++++  I+ K SE+  ++  I    +E      
Sbjct: 474  EGRITRLEIEVSDGNSKVSEMNTLYEHQQWDKQIQTKDSEIREVEASIARETKELTKGTA 533

Query: 427  DSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL--PLDRDLKK-------EI 477
            +++ + KL++ + E+E      + +I    DK   +L       LD D  +       E+
Sbjct: 534  EADSKAKLSILQKEVETKTTAQEALILTNTDKFDRLLSKWTIETLDDDYHETLEEREDEV 593

Query: 478  TQALRALLTEFDDLSSKSREADKEVNMLQMKIQEV--TDNLSKHRKDVDSKKRFIESKLE 535
            ++A + L +   +L+    +   + ++L+ K QE      L     D  S +  I+    
Sbjct: 594  SKAEKLLASSNAELTQAESQLKTQRDLLRQKTQEFERASGLVARAMDRASFEECID---- 649

Query: 536  SLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF 595
                  F      K  D    +RD       + + +R  +D   ++AR    C  C+R +
Sbjct: 650  ------FPAYIKNKEEDLENAQRD-----RAMVEQIRSFYDKALKMAREKQCCRMCKRSY 698

Query: 596  SAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIP 654
            + +E  DEF+   R++     + + ++  E +N     + L+ +R+ ++   +L    +P
Sbjct: 699  ADQESLDEFMA--RLEKDLQKQKIDLIDAEIANCSEDLKILNSVRLEFDIASRLKDHDVP 756

Query: 655  VAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQ 714
            +    L  L ++ +    +++     +   K  +  +  L  PV       ++I+  Q Q
Sbjct: 757  LLNNELGRLEKKHETLLASYETRKKEVETKKVVRSEILSLRNPVSEIQNYAKDIRENQLQ 816

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLEL------SGSLSTK-DNLQNELEKLRDEQRYMENDL 767
            +  L   L++ G   R++ +IQ  L      +G L  K D L ++ E  R E    E  +
Sbjct: 817  ITSLTKRLEAMGSS-RSVADIQKALQSLNSQAGELKQKRDALWSDKEAARTELAVAERQV 875

Query: 768  SNIQIRWHTLR---EEKVKAANTLRDVKKAEEELEHLMEEKGQL-DLDEKLLAEASGPLS 823
              +  +  + R   E+K   A  L D K      E + + +G + D +E    EA G   
Sbjct: 876  QEVTNQLISARHELEKKQTQAKRLADCK------ESIGQREGHIRDAEE----EARGV-- 923

Query: 824  KEKEKLLSDYNDLKVKLNREYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDERFK 881
             + + + +   + +V++  E  EQ  ++I       +  L  I   I +Y      E  +
Sbjct: 924  -QPQIIKAKAREAEVRMKWEENEQTLKRIADKSSDTLRGLHAIQRGIVQYESGDTVETLE 982

Query: 882  ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQ----DQIRRNIEDNLNYRETKAK 937
             L  +  + E  +    +  DE LV  +R    +R Q    D  +R+I DN+  R+ K +
Sbjct: 983  NLVRESRELEGRI----LGLDERLVVSERELVELRAQRGQADGFKRSITDNIRLRKNKRE 1038

Query: 938  VDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNK 997
            +     EI  LE +  +      F+ ++ K     D L+ +      T+    T ++   
Sbjct: 1039 LGGLEGEIRELEAKNAE-QQRDRFKMDVEKLQRRHDGLVMDRTGKGATIKSLDTQLTEI- 1096

Query: 998  IDLKQAQ--YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKII 1055
              LK+ +  +KD  K   +  I+L+TT +AN+DL  Y  ALDKA+M++H++KMEE+N+II
Sbjct: 1097 --LKEYEIDFKDAKKNFHEGQIRLQTTTVANEDLGTYQMALDKAVMKYHSLKMEEVNRII 1154

Query: 1056 RELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
             +LW++TY+G D+D I I S+ E A G R Y+Y+V M   DAEL+MRGRCSAGQKVLAS+
Sbjct: 1155 DDLWKKTYKGTDVDTILIRSEQENAKGNRLYNYRVCMLKQDAELDMRGRCSAGQKVLASI 1214

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDE 1174
            IIRLALAE F  NCG++ALDEPTTNLD  N+ +LA +LH I+  R+ Q+NFQLIVITHDE
Sbjct: 1215 IIRLALAECFGTNCGLIALDEPTTNLDRDNSRALAQSLHDIINYRQAQKNFQLIVITHDE 1274

Query: 1175 RFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             F + +   Q  E YYRV++++ Q S I  Q I
Sbjct: 1275 DFLRDMKCNQFTEYYYRVSRNERQKSQIHRQSI 1307


>gi|358387565|gb|EHK25159.1| hypothetical protein TRIVIDRAFT_143603 [Trichoderma virens Gv29-8]
          Length = 1307

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 331/1251 (26%), Positives = 615/1251 (49%), Gaps = 104/1251 (8%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K ++  L  +N   GE+   S R A +D  +P  +GVS AIL+ VIF HQDE+ WPL +P
Sbjct: 110  KTLDCSLVVVN--NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEP 167

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
            S LKK+FD+IF A +YTKA+E +K L K Q +++   +    + +  KD   +  + ++ 
Sbjct: 168  SALKKRFDEIFEALKYTKAIENLKVLRKKQVEQLAKLQNDEAHNKVNKDRGERAEKRMTA 227

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             Q + EA +++ + L K ++   DKI           ++   +  +  +R  L  +Q   
Sbjct: 228  LQAEIEAARDKCESLTKDMEQTQDKIRQKHEQANSFLQI---VQNLNNKREQLEYRQDA- 283

Query: 184  YAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAE 243
                  E+  T +EL+      E  +++ E  + + ++E      +   L++ +  +   
Sbjct: 284  ----VNELRQTIDELREDDATLERSLSQYEESMGRYQQEAEQNKAQYAELQKELAKHRQT 339

Query: 244  ITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
             +  L+E G H S       ++  R   IQ+   ++NL    +   +++    F ++I+ 
Sbjct: 340  QSAKLAEQGKHQSDKDKYERQLKARVELIQEAARQYNLRGF-DEDLNDQHIQAFQDKIQK 398

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG-ILKHIKEKE 355
             L++ +RDLE  +K +   L  A     +   R K    Q +   + + G I K     +
Sbjct: 399  LLTEKKRDLERLQKENAAELDKATGVITELEGR-KAARTQDRVSAKQRMGAIEKRTSVLQ 457

Query: 356  NERDSFELQISNLNL--SHIDERENKMR-IEVERKTNQLAEREFEINIRQKQSELFAMDQ 412
            NE  S ++      +    ++E E+++R ++ E   +   ++  E N +Q Q     ++ 
Sbjct: 458  NEAGSIDVDEGAKAVLDGQLEELESRLRHVQQEMDKSNWDQQLTEANDKQWQ-----LEN 512

Query: 413  KIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL-PLDR 471
            + + L+RE       + +R +L L+K E+ + K+K + + + +K K+ +VL     P   
Sbjct: 513  ENEKLSRELVECTRLASERAQLELRKKEMADRKRKLETLTETWKPKLDNVLGADWEPESV 572

Query: 472  DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE 531
            D + +  Q+ +       D   +  +  ++   ++ K++   +   K  +++   K+ + 
Sbjct: 573  DSRFQSVQSRQN--KALQDAQKRRDQTRQKQQKVEYKLKNARETHEKKTQEMARSKQEVV 630

Query: 532  SKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCC 591
            + L+++      ++ Y + + + +++ +  ++  ++ D +   ++   R+      C  C
Sbjct: 631  AALQNVRDGAV-VEDYMEEVAAVEQQVEELRTDLSLFDALFDYYNKCRRMLDTQKRCTLC 689

Query: 592  ERPFSAEEE---DEFVKK--QRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYV 646
            +R F   +    D   KK  + +      +  K L     N +S    L  +R  ++ Y 
Sbjct: 690  DRHFDDSQSAALDRLSKKIDKHLNPKGKVDTEKDLKEAVDNLES----LRAVRSAFDTYE 745

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +LS E +P  +  +     E +   +  ++    +   +     +  L + V    +  +
Sbjct: 746  RLSAE-LPALQSEVKTTEGEFESLEKQLEEEDAFVVAEEEKLRDLGDLAKTVTNISQTVR 804

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTME--EIQLELSGSLSTKDNLQNELEKLRDEQRYME 764
            EI+  + QVD +     S G      E  E+Q  LS  L +   L+N++ KL  +++ M+
Sbjct: 805  EIKDAEAQVDRIVSQQSSSGVSRSVEEIHELQSNLSEQLRS---LKNKISKLTADKQRMK 861

Query: 765  NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG-----------QLDLDEK 813
            + ++++++    LR +  + A  L   K  + +++ L E+             +L+  E 
Sbjct: 862  DQINSLELEKSELRNKIGRTAGQLEKKKDLQNQIQTLKEDYTHQREVIQRTDEELEKIEP 921

Query: 814  LLAEASGPL------SKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASK 867
             +AEA           + KE++++D  D                +N   EI+M   + + 
Sbjct: 922  GIAEARSARDETLRHGRSKEQVITDERDAI--------------MNSMSEIKM---VDND 964

Query: 868  IKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQ 920
            I++Y D      L  ++R    L+   S +E E+    +RT+++  ++D       + D+
Sbjct: 965  IQDYVDRGGLTNLASNQRAIASLETAISTTEKEIADLTVRTNKLKQDID-------SGDR 1017

Query: 921  IRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE-TELGKHLLER--DRLLS 977
             ++NI DN+NYR+    +D   ++IE+LE+R         +E  +     LE   +RLL+
Sbjct: 1018 KKKNISDNINYRKHLRTLDVLRTDIEALEDR----NAHEDYERLQAEARSLENMSNRLLA 1073

Query: 978  EVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALD 1037
            E     GTM      + R  +   +  YKD  +++ +  I+++TT+ A +DL +    +D
Sbjct: 1074 ERGSVMGTMKSKDEELGR-LLQEWEMDYKDAKQKYRESHIRVETTKAAIEDLSQCTATVD 1132

Query: 1038 KALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDA 1096
            KA+M+FH MKM E+N+I  ELWQ TY+G DID I I SD+E   G R+Y+Y++ M   D 
Sbjct: 1133 KAVMQFHAMKMAEVNRIAGELWQTTYQGTDIDTILIKSDNENTTGKRNYNYRLCMVKQDT 1192

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGRCSAGQKVLAS++IRLALAE+F +NCG++ALDEPTTNLD  N +SLA +LHRI+
Sbjct: 1193 EMDMRGRCSAGQKVLASIVIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHRII 1252

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + R+ Q NFQLIVITHDE F + +      + ++RV +D+ Q+S+I  + I
Sbjct: 1253 QTRQQQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVKRDEKQNSVISRESI 1303


>gi|146422673|ref|XP_001487272.1| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1302

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 351/1267 (27%), Positives = 619/1267 (48%), Gaps = 145/1267 (11%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L  ++   G+K  +S + A++D ++P  +G S+AIL+ VIF HQD++ WPL +
Sbjct: 113  FKTLEGQLSIMDQ--GQKSTISTKNAELDSQIPVYLGASRAILDYVIFCHQDDSLWPLSE 170

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
             S LKK+FDDIF A ++TK L+ +K + KD + +IK     +++L+  K  A K+R  + 
Sbjct: 171  ASVLKKRFDDIFEALKFTKVLDSLKTIKKDMSNDIKLIDQNVQHLRVDKSRADKIRSKVQ 230

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ-- 180
                  +AL  ++  L  +   I++K    E      +  Q+ +S    R   L   Q  
Sbjct: 231  STSVTCDALSEEIANLTST---IEEKEREAEALFVSNQSFQEILS----RHEQLQYSQKS 283

Query: 181  -QKQYAALAEEIE---DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQN 236
             Q Q   + + IE   D++  L +  +NFE  + +R+++ S    E       ++ LE+ 
Sbjct: 284  CQVQLERIVKNIEILPDSETVLMSRLDNFESHLQERQAEASMKHNE-------LRALEER 336

Query: 237  IDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI----- 291
            +     E+ +L    G+   +     +  QKL        L   P  N+     I     
Sbjct: 337  LQNLRLELNSLSRTEGSLKLKEELYHTNKQKLVQLIEENLLAKDPKPNDMNFQKIVDDLD 396

Query: 292  NRIRSRLSDLERDLEDKKKSDELA-------------LKMAWDSY----------LDAND 328
            N I+   S  ER     K S E A             L+  +  Y          ++   
Sbjct: 397  NTIKKASSAYERLKSSNKLSYEQAASRVHEISETITKLEQRYQYYQQDLLNTRSQINEGR 456

Query: 329  RWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKT 388
            +  N + Q++A++EI      H +E ++  D ++ Q  N  +  +D       IE ER  
Sbjct: 457  KRLNTQQQQEAELEI------HKRELKDLEDKYDPQSHNDAIKSLDSL-----IENER-- 503

Query: 389  NQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKK- 447
            +QLA+ E         S+   + +K+   +++ D L+  S  +  +  K+  L  H K  
Sbjct: 504  SQLAQLE---------SQSDTLGRKVAQASKQSDTLSKVSFIKEGITRKEVTLAAHLKSL 554

Query: 448  ----HKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN 503
                 K I  +Y++   D          +L+ E+T+A   L    D  SS+ +   ++V 
Sbjct: 555  GSLFEKMIGKQYENTGSD----------ELEAELTKAGSRL----DLKSSEQKNFSRQVE 600

Query: 504  MLQMKIQ----EVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEK-R 558
             L +K++    ++T+NL K     +   + IE +          ID Y++V+   +E  R
Sbjct: 601  SLTVKLESTQAQITENLDKTASIKNDIVKVIEEE---------EIDFYEQVISDLEENHR 651

Query: 559  DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS-SAEH 617
            D  +S  N  +   Q       +A +   C  C R F +    +F+ + R    S +AE 
Sbjct: 652  DALES-LNTFEVTNQFKIKAIEIAESEKYCTLCLRHFDSPGLSKFLTELRANVKSMTAET 710

Query: 618  MKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDV 677
            ++  + E++      + ++ L + Y +     ++ +P  E    + T+++    +    +
Sbjct: 711  LEKEAKETAKELEQAKNINPLILKYRQ----CRQELPELEAKKTKETQQMKDAEKLKAKI 766

Query: 678  LGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQL 737
               L  ++ D +S++ L  P+    R+ +EI++ Q+++  LE  L   G      E+  +
Sbjct: 767  DSELESLQGDVDSLKALRTPLAEVSRIRKEIEVSQRELSSLEDSLTDYGS---VTEQSPI 823

Query: 738  ELSGSLSTKDNLQNELEKLRD------EQRYM-ENDLSNIQIRWHTLREEKVKAANTLRD 790
            EL   +   D +  E++ LR       E +Y+ + +L+ ++ R   ++++K+  +   R 
Sbjct: 824  ELQREM---DRINREMKALRQSVSDNVESKYVKQRELARLEGR---VKDKKLAISVLERA 877

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLK---VKLNREYEEQ 847
            +   E E   +   + Q+ + ++ + E    L  ++EK   +  +LK   V++ +  E++
Sbjct: 878  LIDQEHEKVAIDGYEAQVVVLQQSMTEIEQELGIQREKRKEEEENLKRITVEIEK-VEQE 936

Query: 848  AEQKINFQQEI-EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILV 906
             E +IN   ++ + +  +   IKE+ D+ +  +F+ +    S   S ++  ++   +I  
Sbjct: 937  KEAEINRNHKLKDQVSDLLQNIKEFDDVDR-VKFETVSNDISTINSNIEKLEVEILKIQK 995

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            ++   +  +   + ++  I DNL+YR  + ++++  ++I      +L I    +   E  
Sbjct: 996  DMKMVEKSINEANNLKSQIRDNLDYRRLQNEMNEIENQI-----GMLDIEDAQSKRNEYN 1050

Query: 967  KHL----LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
            +      LE   L SE     G +   +  I   K DL  ++Y D+D+R+  + ++L+T 
Sbjct: 1051 ERTREIRLEITNLNSEHAGKVGEVKQLRDQIRTMKEDLN-SEYVDVDQRYQAEWVKLQTN 1109

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGA 1080
             +A  DL  Y  ALD A+M++HT KME IN+I+ ELW+QTY+G D+D I I SD   +  
Sbjct: 1110 MLATSDLQTYSKALDNAIMKYHTHKMESINRILNELWKQTYKGTDVDTIAIKSDINLQAK 1169

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            G RSY+Y+V+M   D EL+MRGRCSAGQKVL S++IRLALAE F  NCGI+ALDEPTTNL
Sbjct: 1170 GNRSYNYRVVMYKQDCELDMRGRCSAGQKVLTSILIRLALAECFGSNCGIIALDEPTTNL 1229

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            D  N ESLA +L+ I+E R+GQ+NFQLIVITHDE+F   IG  Q  + +YRV +D++Q S
Sbjct: 1230 DVENTESLAQSLNNIIEFRRGQKNFQLIVITHDEKFLSHIGGEQFTDNFYRVQRDENQRS 1289

Query: 1201 IIEAQEI 1207
            II +  I
Sbjct: 1290 IIRSLPI 1296


>gi|50291227|ref|XP_448046.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527357|emb|CAG60997.1| unnamed protein product [Candida glabrata]
          Length = 1305

 Score =  328 bits (841), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 362/1287 (28%), Positives = 622/1287 (48%), Gaps = 183/1287 (14%)

Query: 6    IESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPST 65
            +E  L  IN  +GE+  LS R  D+D  VP  +GV KAILE VIF HQ+++ WPL +PS 
Sbjct: 112  LEGQLVAINK-SGERTTLSTRSVDLDSHVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSN 170

Query: 66   LKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQ 125
            LKKKFD+IF A ++TKA++ +K + K+ A  IK     +E+L+               D+
Sbjct: 171  LKKKFDEIFQAMKFTKAIDNLKAIKKEMAVNIKLLTQSVEHLRI--------------DR 216

Query: 126  EKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYA 185
            +++ A K ++++L + I D   ++   E           ++ ++     +LF+  Q  + 
Sbjct: 217  DRSRATKMKVKQLNEKINDYQSQVDDVE----------QELESINGSLDSLFKSNQ-NFQ 265

Query: 186  ALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEIT 245
            ++   IE  +  +       E +     + I KL+  K D++  +K   ++I+    ++ 
Sbjct: 266  SVLSRIETLNASISAASTQIERL----SNSIEKLDMPKVDLENLLKNFSESIEQKELDVK 321

Query: 246  NLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL-NFINRIRSRLSDLERD 304
             L S+  +   ++        +L  +   G L      NE  L +F + IR    + + D
Sbjct: 322  RLESKIASDRQKLENCQKQSNRLMLQQ--GELTAKKLQNENTLKSFQDTIRQIKDEHKLD 379

Query: 305  L---EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
            L   E  +++ +  LK   D     N+    +E  K    E    I   I  +E +   +
Sbjct: 380  LNAEEPPQRNVDHILKKKADMESSVNEAISKLEETKMNLKEKSDSIRNSINLEEQKLSYY 439

Query: 362  ELQISNLNLSHIDERENKMR-----IEVERKTNQLAEREF--EINIRQKQSELFAMDQKI 414
            E  I  L  + +D+++ ++      IE + K  +    +   E+   +K++ +  ++ +I
Sbjct: 440  ESDIKQL-ATKLDQKQKQISSIPADIEEQLKAKKAVWSKLSKELQEFEKENNITDINNQI 498

Query: 415  KALNRE---KDVLAGDSEDRVKLALKKAEL--------ENHKKKHKKIIDEYKDKIRDVL 463
            K+ N E    ++LA   E  ++   KK+EL        EN  +K  +I       + D +
Sbjct: 499  KSNNEELSKSELLAQQIETDLQNYSKKSELSTKLSVLIENMDEKQNEINKITTALLNDTM 558

Query: 464  KGRLPLDR-------------DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQ 510
                 LD               L+K I   L+A    F+++S    E + E+N  + K+ 
Sbjct: 559  IKEWGLDDVKQLSFEFKTHYIALQKNIATNLKA----FNEISKSQTELEYELNTCKGKV- 613

Query: 511  EVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVL--DSAKEKRDVQKSKYNIA 568
               +NL +H+K+     + I + + S+  +  SI+ Y  VL       K  ++  K    
Sbjct: 614  ---NNL-QHKKE-----KLILN-INSVLPEDCSIEDYDDVLLETEVSYKTALENLK---- 659

Query: 569  DGMRQMFDPFER----VARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSL 623
              M Q    F R    VA  +  C  C R F + E   + +K+ + K  +  E     +L
Sbjct: 660  --MHQTTLEFNRKALEVAINNDCCYLCSRSFENTEFRSKILKELKEKTDTKFEESLKTTL 717

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKL---SKETIPVAEKNLHELTEELDQKSQAFDDVLGV 680
            E        + L+ LR+  ++   L   S E+  + ++ + +L++ELD K     +    
Sbjct: 718  EDEK-----EYLNNLRLAEKDIYNLNSISSESKALQDR-ISQLSKELDNKKSEVAEANTT 771

Query: 681  LAQIKADKESVEVLVQP-VETADRLFQEIQLWQKQVDDLEYMLDS---RGQGVRTMEEIQ 736
            + ++K  ++  +  ++P ++  D L +EI   +++ + L  ++ S    G  V TME++Q
Sbjct: 772  IEKLKEKRDHCDNYIKPKMDKIDYLQKEIYNHEEEKNSLNDVIRSSAENGDSV-TMEQLQ 830

Query: 737  LELSGSLSTKDNLQNELE---KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
                      DN ++  E   K+R E   ++    NI  + +TL  + ++ AN   DV +
Sbjct: 831  ----------DNQKSTRELIWKIRSEIESLQEQRENISSKNNTLINQ-IRQAND--DVAE 877

Query: 794  AEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVK---LNREYEEQAE- 849
             E++ +  +  + Q+  D+K + E    L+  KE +    NDL      LN+E  E+   
Sbjct: 878  IEKQFDMKVTIQEQIANDKKHIEE----LTNSKESIKLHINDLSKSVEMLNKENSEKIST 933

Query: 850  -------QKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTD 902
                   +K  FQ   E++L++            ++   +L +  +  E  ++ C+    
Sbjct: 934  LDKDAKRKKGEFQSFNELVLQV------------NQLHHQLMQYNTSDEQHLQECERSIK 981

Query: 903  EILVELDRFKDIVRNQDQI--------------RRNIEDNLNYRETKAKVDKFASEIESL 948
            E+  E++  K+ +   + +              +RN+  N+   + K ++    +E+ SL
Sbjct: 982  ELEKEMNILKNGLEADNHVLNEQSQKLYDSTGEKRNLLQNIELIDLKEQLLSMNNELSSL 1041

Query: 949  EERVLKIGGVSTFETELGKHLLERDRLLSEVNR--CQGTMSVYQTNISRNKID-LKQ--- 1002
                         E E  K+  E  RL ++  R   Q    + +    +N+ID L Q   
Sbjct: 1042 --------NAQNAEAERDKYQQESARLRTQYERLSAQNAGKLGEIRQIQNQIDSLTQQLR 1093

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            + YKDID ++  + ++L+T   AN D+D Y  ALD A+M++H++KME+IN+II ELW++T
Sbjct: 1094 SDYKDIDDKYQKEWVELQTRSFANDDIDTYSKALDSAIMKYHSLKMEDINRIIDELWKRT 1153

Query: 1063 YRGQDIDYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            Y G DID I+I SD  G+ T+  SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL
Sbjct: 1154 YTGTDIDTIKICSDEVGSTTKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLAL 1213

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLI 1180
            +ETF +NCG++ALDEPTTNLD  N ESLA +LH I+E RK Q+NFQLIVITHDE+F   +
Sbjct: 1214 SETFGINCGVIALDEPTTNLDEENIESLAKSLHNIIEFRKHQKNFQLIVITHDEKFLNHM 1273

Query: 1181 GQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
                  + ++RV +DD   S+IE  +I
Sbjct: 1274 NAASFTDHFFRVKRDDRLKSLIEWVDI 1300


>gi|361124395|gb|EHK96494.1| putative DNA repair protein RAD50 [Glarea lozoyensis 74030]
          Length = 1344

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 325/1224 (26%), Positives = 590/1224 (48%), Gaps = 85/1224 (6%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  LS R  +MD+ VP  + VS AILE+VIF HQDE+ WP+ +P  LKKKFD+IF A 
Sbjct: 157  GERTNLSKRVMEMDKIVPKYLAVSPAILESVIFCHQDESLWPMSEPGPLKKKFDEIFEAM 216

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ +K + K+Q +EI   K+  +N +  K+ A K+ +  +  Q++ E L  Q+++
Sbjct: 217  KYTKAIDQLKTVRKNQTKEIGELKIHEDNCRINKEKADKVAKRSTALQDEIEVLTKQLED 276

Query: 138  LEKSI-------QDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEE 190
            L+K +       +D +D+ H       +L     Q S   AR     E+         +E
Sbjct: 277  LKKEVRVAAQDQKDKEDRAHSASTVYNEL-----QASRTQAR---YLEENLANLRKHMKE 328

Query: 191  IEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSE 250
            + ++DE    W    E  +A  +  + + ++E+ D+  +   L +   A T +++   SE
Sbjct: 329  MTESDE----W---LESTLAHFDQRMLEYKKEEADLRAQYTKLNEAAKAATEQLSKKQSE 381

Query: 251  AGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLER 303
             G H++        +  R   +++   +H+L    +    ++   +F+ RI     D +R
Sbjct: 382  KGQHLAEKASFDRNLESRLQLVKEAAHQHSLRGY-DGDLEDDQIRDFVGRIEKLSKDKDR 440

Query: 304  DLE--DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
            +L+   KK  +EL  K    + L A  R    + +  A+  I A   K +  K+NE  + 
Sbjct: 441  ELDALSKKTDEELQSKQEVLTSL-ATSRTSKTQEKVAARQTI-ASNDKKMNLKQNE--AG 496

Query: 362  ELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQS---ELFAMDQKIKALN 418
             +++    L+ ++   N+ +  +++   + A+  +++NIR++     EL A   +++   
Sbjct: 497  NIKVDEGTLAALEASLNESKARLDQLNKKYADAAWDVNIRKETKLLRELQAESSRLRNDL 556

Query: 419  REKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEIT 478
             E + + G+   + +L + K EL++ + +   +   Y D++  V+ G    D  L+    
Sbjct: 557  FESNKVVGE---QARLQVIKKELKDRQTRLDTMKATYNDQLASVVGGDWEAD-SLEHSFQ 612

Query: 479  QALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD-SKKRFIESKLESL 537
             A+   +    D   +    ++++  ++ K++  +D+L + +  +   +K  +ES     
Sbjct: 613  AAMDDRVQAVRDAKKRQDAFNQQLTSIEYKLKTSSDSLRQKKLTMQQCQKEVMESICLPN 672

Query: 538  NQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFER---VARAHHVCPCCERP 594
               + S+D Y   L  A  +   Q ++ N+ DG   + D +++   +   ++ C  C RP
Sbjct: 673  GDDLPSVDDYPAEL--ADLEIQCQAAQKNL-DGADYVMDYYKKGQEIINVNNACRLCARP 729

Query: 595  FSAEEED----EFVKKQ--RVKAASSAEHMKVLS--LESSNADSYFQQLDKLRMVYEEYV 646
            F+  +E     E ++K+  R+   S  E ++ L   L  +N           R+ YE Y 
Sbjct: 730  FADSKEKASALEKIQKELARIAKDSLTEAVQQLGEDLRVANG---------ARLQYENYK 780

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
             LS + IP  EK +  L  E        +    ++  + A KE  + L + V        
Sbjct: 781  LLSDKEIPSLEKTVQTLESEKATLVAQAEKQDSLVRDVTAAKEDGDALSKTVAAITNYCH 840

Query: 707  EIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            EI  ++  +  L       G  + + EEI  + +      + L ++++KL  E++     
Sbjct: 841  EISKYETDIARLSSQQSYSGSTL-SNEEINQQSNECEEKINKLNSKIDKLVSEEKQAMAM 899

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEK 826
            ++ +      L +E   A + L    +   E++   +   QL    ++       L+ + 
Sbjct: 900  ITALDREVSQLNQESGNAKHQLEKRNRLAAEVKEYRDSTSQLREAIRVADVELESLAPQF 959

Query: 827  EKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEK 886
             K  +  +++K +   E  +  + K +    +     I + I  Y +     +    +  
Sbjct: 960  AKASAQLDEVKRRGRHEASKLQKDKDSVANTVNKFRAIETAINRYVESNGSGKLAACERA 1019

Query: 887  KSQSESEVKSCKIRTDEILVELDRFKDI-VRNQDQ--IRRNIEDNLNYRETKAKVDKFAS 943
                E + K  +    EI V   +  D+  R+ D    RR IE+N+ YR+ +  ++    
Sbjct: 1020 IHAIEQDQKRLE---KEIAVVTKKNNDVNARSNDSENSRRTIEENVRYRKGRKDIEAIHH 1076

Query: 944  EIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSV----YQTNISRNKID 999
            +I  LE + +  G       EL         L ++     G ++      Q  I+  +ID
Sbjct: 1077 KIADLESQNVD-GEHEQLHAELQYATQNLSILEAKKGPIMGALTAKDQELQRYIAEWEID 1135

Query: 1000 LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
                 YKD   ++ +  ++L+ T+ A  DL +Y +ALD A+M++H  KME IN I  +LW
Sbjct: 1136 -----YKDAADKYRETHLKLEVTKAACDDLGKYGSALDSAIMQYHATKMEAINSIATDLW 1190

Query: 1060 QQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRL 1118
            Q+TY+G D+D I I SD+E   T R+Y+Y+V+M  G+ E++MRGRCSAGQKVLA +IIRL
Sbjct: 1191 QRTYQGTDVDGILIRSDAETVKTNRTYNYRVVMVKGEVEMDMRGRCSAGQKVLACIIIRL 1250

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            ALAE F  NCG++ALDEPTTNLD  N ++LA +L+++++ R+ Q NFQ+I+ITHDE F +
Sbjct: 1251 ALAECFGQNCGVIALDEPTTNLDTDNIKALAQSLNQLIKARRQQSNFQIIIITHDEEFLR 1310

Query: 1179 LIGQRQHAEKYYRVAKDDHQHSII 1202
             +      E Y++V++D  Q S I
Sbjct: 1311 EMQPSDFTESYWQVSRDREQKSSI 1334


>gi|303273074|ref|XP_003055898.1| Rad50 DNA repair/recombination protein [Micromonas pusilla CCMP1545]
 gi|226461982|gb|EEH59274.1| Rad50 DNA repair/recombination protein [Micromonas pusilla CCMP1545]
          Length = 1542

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 158/301 (52%), Positives = 213/301 (70%), Gaps = 3/301 (0%)

Query: 912  KDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG-GVSTFETELGKHLL 970
            ++ + ++  I R+++DN+ Y + K +  K  SEI++L  ++  +G  V+  E        
Sbjct: 1242 RETIESKASIARDLDDNIAYLKGKEEEAKLTSEIDALRAKIQALGVDVNAVELTFRADQK 1301

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
             RD L       QG ++ +Q  I   K +L   QYK + KR    +++LKT E  ++DL+
Sbjct: 1302 SRDELREAYAESQGRVTTHQEAIDACKKELNDPQYKGVRKRLSKHVVELKTYEYVSQDLE 1361

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA--GTRSYSYK 1088
            RY++ALD+ALM FH  KM +INK+++ELWQ+TYRGQDID+I+I SD +    G  SY+Y+
Sbjct: 1362 RYHSALDRALMAFHASKMSDINKVVKELWQRTYRGQDIDFIQIRSDDDTGNKGRSSYNYR 1421

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  GDAELEMRGRCSAGQKVLA LIIRLALAETFCLNCGILALDEPTTNLD PNA++L
Sbjct: 1422 VVMIVGDAELEMRGRCSAGQKVLACLIIRLALAETFCLNCGILALDEPTTNLDAPNADAL 1481

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIF 1208
            A +L  IM  R+ QENFQLIVITHD  FAQ++GQR+HA+ Y+R+ KDD QHS IE + I+
Sbjct: 1482 ARSLIDIMRSREDQENFQLIVITHDMHFAQVLGQREHADYYWRITKDDDQHSHIECENIY 1541

Query: 1209 D 1209
            +
Sbjct: 1542 E 1542



 Score =  176 bits (445), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 172/269 (63%), Gaps = 12/269 (4%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E K ++ V+QT++  TGEKV +S +CAD++  VP +MGVSKAILENV+FVHQ+++NWPL
Sbjct: 109 LEKKDLDQVIQTLDEKTGEKVSVSRKCADINATVPDMMGVSKAILENVVFVHQEDSNWPL 168

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            + +TLKKKFD+IFSAT+YTKALE I KL K+Q+  IK YKLK+E L+   D A KL++ 
Sbjct: 169 GEAATLKKKFDEIFSATKYTKALEHINKLRKEQSATIKEYKLKVETLRVQCDHATKLKQR 228

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDD--KIHHTELTLKDLRKMQDQISTMTARRSTLFE 178
           + ++  K   L  +M+ L++ I   ++  K  H +L+L  +RK+ ++ + + A+R  +  
Sbjct: 229 LDENAGKATRLGERMRTLQEKIDRANEALKARHDDLSL--IRKIAEKKALLEAKRDVVVA 286

Query: 179 QQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFL----E 234
           +  ++ A+L  E+ DT E L++ ++ F    A+  +++ + + +   +    + L    E
Sbjct: 287 ECARRGASLKNELTDTLENLQSHRDAFGAKTAELRAELERHDAKCASLAACARELREKRE 346

Query: 235 QNIDAYTAEITNLLSEAGAHMSRMNERDS 263
           +++ A+      L +EA AH  R++ R S
Sbjct: 347 RDLRAH----GKLTAEAEAHGKRLSARAS 371


>gi|50304743|ref|XP_452327.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641460|emb|CAH01178.1| KLLA0C02915p [Kluyveromyces lactis]
          Length = 1296

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 357/1291 (27%), Positives = 642/1291 (49%), Gaps = 194/1291 (15%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L  IN   GE+  LS R  ++D+++P  +GV KAIL+ VIF HQ+++ WPL +
Sbjct: 109  FKTLEGQLVAINH--GERTTLSTRANELDQQIPLYLGVPKAILDYVIFCHQEDSLWPLSE 166

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
            PS LKK+FD+IF A ++TKAL+ +K + KD + +IK  K  +E+L+T KD +   + +IS
Sbjct: 167  PSILKKRFDEIFQAMKFTKALDNLKTIKKDISIDIKLLKQSVEHLKTDKDRSTATKVNIS 226

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            +       L+N+++E +K +                 + ++  ++ +T     LF   QK
Sbjct: 227  K-------LENKIEEYQKEV-----------------KSIEHDLNIITKESDALFSSNQK 262

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
                L++      + LK+ K +F   + + +S I  L   K++++  ++  ++ ++    
Sbjct: 263  FQETLSKL-----DNLKHNKTSFMEQIQRLQSSIEILPNSKSELEDMLQNFQRLLEEKNI 317

Query: 243  EITNLLSEAGAHMSRMNE-RDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
            E+    SE    +S +N+ R+   + +  +  LGS  N   +++  +N    I + LS+L
Sbjct: 318  ELFEYQSEKERLLSLLNDCRNEQQEVVRLQGELGSKKNQYETSKIKMN---TILTELSEL 374

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQ---KQAKMEIKAGILKHIKEKENER 358
              ++  +  + E++  +       AN   +++ A+   ++  +E K  +L++   K+ ++
Sbjct: 375  -YNISKESVTSEVSTMLH-----TANKNLESLLAKHHFEETTLEEKLSVLRNSFAKKEQQ 428

Query: 359  DSFELQISNLNLSHIDERENKMR--------IEVERKTNQLAEREFEINIRQKQSELF-- 408
             S+   IS+ +L+ + ++  K+R         E + K  + A   +E  ++Q  +E    
Sbjct: 429  LSY---ISS-DLNKLADQTKKLRNRLNDKRVSEKDLKVEKEALNNYESKLKQWNTERIVD 484

Query: 409  AMDQKIKALNREKDVLAGDSEDRV----------------KLALKKAELENHKKKHKKII 452
            A+   IK  N+  D+L+ + E  V                KL+L KA  E+ KKK  + I
Sbjct: 485  AISTSIKTKNQ--DILSLEDELEVIQQQITKANQHSDLYAKLSLLKAS-ESTKKKDVETI 541

Query: 453  DEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEV 512
             +  ++  +++     L+ DL  +    L     +   + + S  A KE    + ++Q +
Sbjct: 542  KKQLEEGANLVSVSFNLEGDLLSQFNSILDKKRVDLKKIKNDSDIATKEFIQYENQLQGI 601

Query: 513  TDNLSKHRKDVDSKKRFIESKL-ESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIA-DG 570
             + + +   ++ S    IES+L ESL  ++  IDTY +      E RD ++S Y IA + 
Sbjct: 602  EEQIYEIESNITS----IESRLKESLPDEV-EIDTYDE------ELRDSEES-YRIALEN 649

Query: 571  MRQMFDPFE------RVARAHHVCPCCERPFS-AEEEDEFVKKQRVKAASSAEHMKVLSL 623
            ++      E       VA+    C  C+R F+      + +  + +KA ++      L  
Sbjct: 650  LKMHKTTLEFNLKALEVAKNEDCCYLCQRKFNDVTSSSKLI--EDLKARTNKNFQIALET 707

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLSK--ETIPVAEKNLHELTEELDQKSQAFDDVLGVL 681
             +   ++Y   L  L+  Y++ +   K    +   + N   +    ++K     +    L
Sbjct: 708  TAKEMETY---LHDLKSCYDDVLSHRKYQRELSTMKDNYARIKRSTEEKRSNQQEKFHTL 764

Query: 682  AQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSG 741
              +++   ++   +QP     ++    +   K   DL           R  EE+ + +S 
Sbjct: 765  QNLESKLATLTEKLQP--NVSKVLDTEEELSKLTSDLR----------RVEEELSIYISD 812

Query: 742  -SLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRD---------- 790
              L T + L ++ +++ +E R +  D+S++QI+    +E+K K  N L            
Sbjct: 813  EKLETIETLHSKQKRVNNELRALRKDISDLQIQ----KEDKSKEYNNLLSLIREKNSNIN 868

Query: 791  ----------------------VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEK 828
                                  ++ +E+E E L EE   L L+   ++ ASG L++ K K
Sbjct: 869  NMESALQEYLNITKEVCENESIIESSEKESEILTEEVNDLKLE---ISSASGSLNEGKAK 925

Query: 829  LLSDYNDLKVKLNREYEEQAEQKI-NFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKK 887
                +  L+V+  RE +++ E ++ N  + +E++        + +++    R  E +EK 
Sbjct: 926  ----HRQLEVEA-RERKDKIESQVANVNELVELI--------QNFEINDAPRLIECEEKL 972

Query: 888  SQSESEVKSCKIRTDEILVELDRFKDIV---RNQDQIRRNIEDNLNYRETKAKVDKFASE 944
            ++  + V+S   +T EI    D   + V   ++ D   +NI+ N++    K ++ +  + 
Sbjct: 973  TEISNSVES---KTAEIKSIEDSINNTVQKLKDSDNEFKNIKLNIDLLGLKCELQRIENA 1029

Query: 945  IESLEERVLKIGGVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNK 997
            I S++        V+  E E  K+  +  RL      LS  N  + G +   Q  IS  K
Sbjct: 1030 ISSMD--------VTHAEQERNKYQEDSLRLRTAYEKLSSENAGKLGEIKQLQNQISNLK 1081

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
              L Q  YK+ID+ +  + I+L+T  +   D+D Y  ALD A+M++H++KM++IN+II E
Sbjct: 1082 NQL-QTDYKNIDEHYQREWIKLQTKSLVTDDIDTYSRALDSAIMKYHSIKMKDINRIIDE 1140

Query: 1058 LWQQTYRGQDIDYIRIHSDS-EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLII 1116
            LW++TY G D+D I+I +D       +SY+Y+V+M   DAEL+MRGRCSAGQKVLA++II
Sbjct: 1141 LWKRTYSGTDVDTIKIKTDEVSNVRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLAAIII 1200

Query: 1117 RLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERF 1176
            RLAL+ETF +NCG++ALDEPTTNLD  N ESLA +L  I+E R+ Q+NFQLIVITHDE+F
Sbjct: 1201 RLALSETFGVNCGVIALDEPTTNLDEENIESLARSLATIIEVRRHQKNFQLIVITHDEKF 1260

Query: 1177 AQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
               +    +A  +Y+V +DD Q S IE  +I
Sbjct: 1261 LNHMNASSYANHFYKVKRDDRQKSQIEWVDI 1291


>gi|91084903|ref|XP_969783.1| PREDICTED: similar to RAD50 homolog [Tribolium castaneum]
 gi|270009233|gb|EFA05681.1| rad50 [Tribolium castaneum]
          Length = 1309

 Score =  323 bits (827), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 317/1234 (25%), Positives = 614/1234 (49%), Gaps = 87/1234 (7%)

Query: 8    SVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLK 67
            + ++ + P+ G+   +S RCAD+  E   +M VS +IL NV+F HQ+ + WPL +   +K
Sbjct: 118  ATIRIVKPN-GDDSSISGRCADITNECCQIMNVSSSILNNVVFCHQENSAWPLDEGKKVK 176

Query: 68   KKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEK 127
            +KFD+IF A +  K +E+ +KL K++ ++IK  KL+LE  +  K+   K +  +   + K
Sbjct: 177  EKFDEIFDAQQSNKCVEIYRKLLKEKQEKIKLLKLELEYKKEKKEQVDKDKRVLQDKEAK 236

Query: 128  TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAAL 187
             E+   ++ +    +Q +  +I       K L +++  ++T  A ++ L E+Q+     L
Sbjct: 237  LESFDAEIAQKMTKLQPVKKRIDEIIDLEKVLSELERDLATKEATKNGLVEEQKTIKKNL 296

Query: 188  AEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNL 247
            A E E TD+EL++   +FE    K E+ I  L + +ND++TK + + + +    +++  L
Sbjct: 297  AFEFEGTDQELQDKIKSFENERQKDETLIQDLVKRQNDIETKKREINEAVQKTQSDLGRL 356

Query: 248  LSEAGAHMSRMNERDSTIQKLF------ARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
              +   ++ +  ER    +KLF       R  + +  +    N  A + IN+++S L++ 
Sbjct: 357  NQQKSHNLKKCCER----KKLFDQALDKFRVKISNFDD----NTGAKHAINQLKSALNER 408

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
            + DL    +  EL L M+  + LD + R K+I+ Q     +I +   + + + E + +S 
Sbjct: 409  QDDLGTLIEEKELDL-MSLQATLD-DVRAKSIKTQ-----QIISSKTREVTDCEQKIESV 461

Query: 362  ELQISNLNLSHIDERENKMRIEVERKT-----NQLAEREFEINIRQKQSELFAMDQKIKA 416
             L+++ L  S    ++   R+E   KT     N   E E    +   +S++  ++  +  
Sbjct: 462  SLELAALASSDEFLQDYTKRLEAISKTIFNLNNSFRETEESERMEASRSQVTTLEHNLDG 521

Query: 417  LNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKE 476
            L RE  +L  +     K+  ++  +   +++  KI  ++ + +R++   + P D +LK  
Sbjct: 522  LEREYRILLQNDTVEGKIESERHLIMEKQREINKIKSKHAESLRELFGTQSP-DCNLKDA 580

Query: 477  ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLES 536
            +    ++       L+ +     K+V  L++++Q   + +   ++D+ + +  I      
Sbjct: 581  VLAKQKSADLALQTLNEQIARKQKDVTTLEVQLQNQIERIGSCQRDLKTGREKI------ 634

Query: 537  LNQQIFSIDTYQKVLDSAKEKRD-VQKSKYNIADGMRQMFDPF-ERVARAHHVCPCCERP 594
               Q+ +   + +VL    EK++ +Q+ K N    ++ +++ + ++       CP CE  
Sbjct: 635  --SQVCNGRDFDEVLTRCSEKKERLQRDKGNYT-SVKIIYNQYIKKFEEERPCCPVCETN 691

Query: 595  FSAEEE--DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKET 652
            FS +     + +   + K     + +  +  E    ++ + +L +L++V +E   L++E 
Sbjct: 692  FSGKTTVVGKIITTLKSKLDKVPQQLAKVETELVEEEALYNKLQQLKVVNDEITVLTREK 751

Query: 653  IPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV---LVQPVETADRLFQEIQ 709
            +P  E  L+E+  + + K     D+  +  Q     +++E+   ++  V T D+   ++ 
Sbjct: 752  LPELESGLNEIKRDYEAKK---TDLEALKQQTCGPLKTLEISKSVISDVSTLDQNQADVD 808

Query: 710  LWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSN 769
              QK V+ L+  L +     ++ +E++ E+  + +    L+ ++E    +    ++ L  
Sbjct: 809  KSQKTVEKLKREL-ALVPSQKSKQEVEAEIDSTKAELSELRRKIEAQTKKINSHKDRLQQ 867

Query: 770  IQIRWHTLREEKVKAANTLRDVKKAEEEL----EHLMEEKGQL--------DLDEKLLAE 817
            +    + L E++++  +++++    E +L    E L   +G++        DL+++L   
Sbjct: 868  LTQERNALFEKQIRMKDSMQNRPNLEAQLNEANEKLQTLRGEIVAKKTELEDLEDEL--- 924

Query: 818  ASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKD 877
              G +  +K+ L+ +   +        E++  Q   F   +  + K+  +I++Y     D
Sbjct: 925  --GKIETQKKNLVQENKTV-------VEKERNQVAMFGNLVHNIEKLEGEIEDYVREGVD 975

Query: 878  ERFKELQEKKS---QSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRET 934
            E+   L+       Q E+ +   K +   IL  L   ++ +   +   R ++ N+  RE 
Sbjct: 976  EKLAALETTLGEFRQKEATLDHTKTK---ILNLLSEKREALAKHELRFRTLQSNVTLREK 1032

Query: 935  KAKVDKFASEIESLEERVLKIGG--VSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN 992
            K        +IE L +    IGG    T   E  + + +++     +N   G  +     
Sbjct: 1033 KVLELDLVLKIEDLRKL---IGGHDYRTVYDEKCELIRQKESHEKTINSITGEKNALLET 1089

Query: 993  ISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEIN 1052
            +   ++ L +  +K+    +  +L +LK  E   KDL +Y   L+KA++ FH  +M++IN
Sbjct: 1090 VDDLRLKLAKPDWKNAYSNYMTKLYELKLAECVVKDLFKYITVLEKAILEFHATRMKQIN 1149

Query: 1053 KIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            K IRE+W++ YRG D+DYI I ++  G+ T    R+Y+Y+V+      ELEMRGRCSAGQ
Sbjct: 1150 KTIREMWREIYRGNDVDYIEIKAEHAGSTTANRKRTYNYRVVQVKKGVELEMRGRCSAGQ 1209

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLA LIIR+ALAET   NCGILALDEPTTNLD  N  SL  AL RI+E R+ ++NFQL+
Sbjct: 1210 KVLACLIIRMALAETLSANCGILALDEPTTNLDRENIFSLCEALARIVESRQKEKNFQLV 1269

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            VITHDE F   + + Q    +YRV+++    S+I
Sbjct: 1270 VITHDEEFINALTRAQGVPFFYRVSRNQDGFSVI 1303


>gi|452844632|gb|EME46566.1| hypothetical protein DOTSEDRAFT_70544 [Dothistroma septosporum NZE10]
          Length = 1305

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 348/1256 (27%), Positives = 582/1256 (46%), Gaps = 142/1256 (11%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GEK  +S R A+M+  +P  +GVSKAILENVIF HQ+++ WPL  P  LK+KFD IF A 
Sbjct: 123  GEKNTVSSRVAEMNGLMPRSLGVSKAILENVIFCHQEDSLWPLAQPKDLKEKFDQIFEAL 182

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA+E IK + K+Q  E+    +  +  Q   + A  L+++  +  E+ + L+ Q  +
Sbjct: 183  KYTKAIENIKIMQKNQRVELGKLVISEQAAQKDHERATLLKQNRRKLAEQAQQLETQRDD 242

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
              + +Q+   +       + D  K+  +++     R T  E+  +  +   E +  TD E
Sbjct: 243  FGRQMQEASRQAAEIWKKVGDAEKIVGELNGKRIARDTK-EESVESLSKTMEVLTGTDVE 301

Query: 198  LKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQ-NIDAYTAEITNLLSEAGAHMS 256
            L+N  +  E  +   ++D   L REK D    +  L+   ++A T E      EAG++ +
Sbjct: 302  LQNMLDQHEERIEIYKTD---LAREKGDYQALVAELKNARLEASTKE-----REAGSYEA 353

Query: 257  RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI-----NRIRSRLSDLERDLEDKKKS 311
            + +  D  I+      N   L      N     +       ++++ +  L R   D++  
Sbjct: 354  QRDNYDRQIE------NRKRLVQETARNHDIRGYDFELHDAQVKAFMEQLSRKARDQQAE 407

Query: 312  DELALKMAWDSYLDANDRWKNIEAQKQAKMEIK--AGILKHIKEKENERDSFELQISNLN 369
             E A                  EAQK+++ +I    GI + I  K+  ++S    I+N +
Sbjct: 408  FERA----------------RTEAQKESQQQINVLTGISEKISAKKASKESARSTIANYD 451

Query: 370  --LSHIDERENKMRIE------VERKTNQLAEREFEINIRQKQSELFAM----DQKIKAL 417
              +  +   +N++ ++      +E + N L E+        ++S+  A+    D  ++ +
Sbjct: 452  GKVRAVQVEQNRLSVDEGGKATLESRLNTLQEQLTIAKSEMEKSDWNAVIETTDTDLRRI 511

Query: 418  NREKDVL----------AGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
               KD L          AGDS    +L   + EL + ++  + +   Y  KI  VL    
Sbjct: 512  EDRKDQLDAEYAEAARRAGDS---AQLDYVQKELGDRQRSLESMQKSYSGKIASVLGDGW 568

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
             L   L ++  +AL     E  +   +S   ++E      +++E T+ L           
Sbjct: 569  KLS-TLDQDYQRALSKSAAELAEAERQSNGTEQERQFAASRLRERTEAL----------- 616

Query: 528  RFIESKLESLNQQI-----FSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVA 582
            +  E++++S  Q+I        + Y   L+  + +RD  K+  +  + +          A
Sbjct: 617  KVAENEMKSAEQKIKDGANCPPEEYHDELNQLEAERDSLKAGKDSFEALASYLKSCVTFA 676

Query: 583  RAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADS---------YFQ 633
             +H+ C  C R F +++       +R +    A+  KVL       D+           Q
Sbjct: 677  ESHNACKTCTRDFGSKD------PRRGRQLLKAQVEKVLEQNRPKNDANATLEETEDVLQ 730

Query: 634  QLDKLRMVYEEYVKLSKETIP-------VAEKNLHELTEELDQKSQAFDDVLGVLAQIKA 686
                    YE + KL  +T P         E    +LT  L+Q+  A +      A + A
Sbjct: 731  TAKAAGPAYESWDKLKNKTFPDLRSEISKLEVECDQLTSRLEQQDMAAEVKKSANADVNA 790

Query: 687  DKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGV-RTMEEIQLELSGSLST 745
               +V+ +V+ V        +IQ         E M   +  G+ R +E IQ ++      
Sbjct: 791  LSRTVQTMVKYVSDTSSFAGQIQ---------ELMTKQKEAGLSRGLEAIQSDIK----- 836

Query: 746  KDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEK 805
            K N Q++  K R+ +     D S  +I   +L  +   A   LRD   AE E++     +
Sbjct: 837  KANDQSKAAKARNSEATSSRDRSRTRI--SSLELQLSDAKGKLRD---AEYEVQQKKSLQ 891

Query: 806  GQLDLDEKLLAEAS---GPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLL 862
             Q D  + L+AE       L  E + L S+ +  + K +     + +Q    Q +   L 
Sbjct: 892  TQEDDYKGLIAEQRKNITTLDAELQNLASELSIERAKHDEIKRRRGDQDRILQDKAGKLT 951

Query: 863  KIASK-------IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIV 915
            K  S+       I+ Y+D   DE+ +  Q +   ++ E+   +    + +  +   +   
Sbjct: 952  KSVSELESADRDIQAYHDRAGDEQLRRAQREVENTQEELARMEASQSDAVRRIKELEQRT 1011

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
            R+ +  + +I +N  YR+    +D   +EI  LE+   +      +E ++G H  ER R 
Sbjct: 1012 RDDEGTKVSIINNQRYRKDLKALDNLRNEIAELEDTNAE-ADKKRYEQQVGSH--ERRR- 1067

Query: 976  LSEVNRCQGTMSVYQTNISRNKIDLKQ---AQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
              E    Q +++   T+IS     L+Q     Y +  +      IQ++TT+ A +DL RY
Sbjct: 1068 -QEAASKQASVTGQLTSISDQLQQLEQDWATTYANAGREFRKAHIQVETTKAAIEDLGRY 1126

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLM 1091
              ALDKA+M++H++KME IN II ELW++TY+G D+D I I S+SE     +SY+Y+V M
Sbjct: 1127 AGALDKAIMKYHSLKMEAINGIIGELWRKTYQGSDVDTILIRSESETVKANKSYNYRVCM 1186

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
               D E++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTNLD  N E+LA +
Sbjct: 1187 MKQDVEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGMIALDEPTTNLDQENIEALARS 1246

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            L  I+  R+ Q NFQLIVITHDE F + +    + + Y+RV +   Q S I+ Q I
Sbjct: 1247 LAEIISVRRTQSNFQLIVITHDEAFLKAMSSSDYTDDYFRVYRGSEQQSCIDKQSI 1302


>gi|308198054|ref|XP_001386802.2| DNA repair protein [Scheffersomyces stipitis CBS 6054]
 gi|149388833|gb|EAZ62779.2| DNA repair protein [Scheffersomyces stipitis CBS 6054]
          Length = 1306

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 348/1311 (26%), Positives = 605/1311 (46%), Gaps = 239/1311 (18%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +E  L TI+   G KV +S + +++D + P  +G S AIL+ V+F HQDE+ WPL +
Sbjct: 113  FKTLEGQLATIDK--GNKVSISTKNSELDAQTPIFLGASPAILDYVLFCHQDESLWPLSE 170

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
             S LKK+FDDIF A+++TK L+ +K + KD + +IK  +  +++L   K  A K+ + + 
Sbjct: 171  ASVLKKRFDDIFEASKFTKVLDNLKTIKKDMSTDIKLIEQSVKHLNIDKTRAKKIEDKVL 230

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDL----RKMQDQISTMTARRSTLFE 178
            Q     E+   Q       I DI+ KI   E   +DL    ++ Q  +ST        +E
Sbjct: 231  QMNASVESYTEQ-------IGDINLKIEAKEKEAEDLFASNQEFQKTLST--------YE 275

Query: 179  QQQKQYAALAEEI-----------EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMD 227
              + Q   + E+I           E TDEEL +  ++F     + E+++       N++ 
Sbjct: 276  SLKIQKRGVEEQIGRMKDNIDYIDEATDEELLSMVDSFNDKAKELEANL-------NELQ 328

Query: 228  TKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAA 287
               +    ++     E+ +L+   G   +R +E +  + K+ +  +  +  ++  S+   
Sbjct: 329  VACESYADSMKEKQTELNDLIRLDGTLKAREDEYNQNMNKMASLISDNASDDSFQSSSYN 388

Query: 288  LNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME-IKAG 346
               I R +S L       E K +  E  L++   S+       KN EA KQ  ++ ++  
Sbjct: 389  SKEIARFKSAL-------EVKNRQLEADLRLTSTSF-------KNSEADKQQSIQSLQDS 434

Query: 347  ILKHIKEKENERDSFE------------LQISNLN--------------LSHIDERENKM 380
            I +  + KE   +  +            ++ISN +              L+ +D+++ K 
Sbjct: 435  ITREEQLKEYSNNDIQSTKQKLSTFKKKIEISNSDESELKLKEEELQSTLAALDDKKKKN 494

Query: 381  RIE-----VERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLA 435
             ++     +E K   L++ EFE++          + +KI   N++       SE + +L 
Sbjct: 495  EVKTLDSKIEEKNELLSKLEFEVD---------ELSKKITTSNKQ-------SEIKTRLN 538

Query: 436  LKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSK- 494
            + K  L    K  + ++   K   +  +   L   +  +     A   +  EF+   SK 
Sbjct: 539  MLKESLTTKTKYLEDVLTATKPSFKKAVGTDLD-PQSCEAAFEDAAEKVRMEFETQQSKV 597

Query: 495  ---SREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFS------ID 545
               SREAD  + ++               K +++ K  I  K+ +L  +I +      ID
Sbjct: 598  AIISREADSTIALV---------------KSINTSKEDIIQKISALKNEILAVIDESEID 642

Query: 546  TYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEF-- 603
            +Y+ V++  ++         N ++  RQ       +A     C  C+R F +    +F  
Sbjct: 643  SYESVVEDLEDSYRNVLEDVNTSEVTRQFNITAISIAEKEQHCLLCKRTFDSRGLQKFID 702

Query: 604  -----VKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEK 658
                 VKK+++K            LES       + ++   + Y + +K S E I    K
Sbjct: 703  ELQHSVKKEKIKETEDQAQEIKKELES------VKSINSQVLSYRDSIKSSVEII----K 752

Query: 659  NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDL 718
             L +L    +++    D    +L + +  K+ V +L + +    RL  EI   Q QV ++
Sbjct: 753  RLDDLNATYEEQKFDLDAHEELLEESRNKKDEVLMLRKSLGEIVRLNGEILELQNQVKEV 812

Query: 719  EYMLDSRGQGVRTMEEIQ--------------LELSGSLSTKDNLQNELEKL----RDEQ 760
               +D  G  V ++ E+Q              LE++     K ++Q E+++L    +D +
Sbjct: 813  SEEIDGLGSVVLSISELQKLQQSKSLQIKSIRLEVTDDTEAKHDIQREIQRLENKVKDTR 872

Query: 761  RYMEN------DLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              + N      D++NI+     L E+ +    TL + K   E L  L E + +L  +   
Sbjct: 873  LAISNLEKSLADINNIKNSISELEEKILSLGTTLSNTK---ERLTELYENRDKLSSEFAN 929

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEY--Y 872
              E +  +   K+K L+D N++                     + ++ ++++ IK+Y  +
Sbjct: 930  TKETNRNVLDSKQKALNDSNEI---------------------VRVITQLSAAIKDYETH 968

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED----- 927
            D+ K      L+E  S+ E   K  +   D+    +   +D ++N +    N +D     
Sbjct: 969  DINK------LRENLSEQERVRKVMEALEDK----MKAVRDEIKNLESQMMNFKDSKHHY 1018

Query: 928  --NLNYRETKAKVDKFASEIESL------------EERVLKIGGVSTFETELGKHLLERD 973
              NL+YR    K+++  +EIE+L            +ER        +   E+     E  
Sbjct: 1019 IANLDYRAQLRKLEEIDNEIEALDIENAQARKEEYQERS------RSLRQEITNLTSEHA 1072

Query: 974  RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY 1033
              + EV + +  +   Q  +        +  +K++++ +  + I+L+T    + D+  Y 
Sbjct: 1073 GKIGEVKQIKDQVKGLQKEL--------ETDFKNVNEIYRAEWIKLQTNMFISNDIQTYS 1124

Query: 1034 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYSYKVLM 1091
             ALD A+M++H++KME+IN+I+ ELW QTY+G DI  I I SD   +  G RSY+Y+V+M
Sbjct: 1125 KALDNAIMKYHSIKMEDINRILGELWSQTYKGSDISTIAIKSDVNLQSKGNRSYNYRVVM 1184

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
                 EL+MRGRCSAGQKVLAS++IRLALAE F +NCGI+ALDEPTTNLD  N+E+LA A
Sbjct: 1185 YKNSNELDMRGRCSAGQKVLASILIRLALAECFGVNCGIIALDEPTTNLDHENSEALAEA 1244

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            L+ I+E RK Q NFQLIVITHDE F   I   +  + +YRV +D+ Q+S I
Sbjct: 1245 LNNIIEYRKAQRNFQLIVITHDENFLTHINGGKFTDHFYRVQRDEQQNSRI 1295


>gi|347838982|emb|CCD53554.1| similar to DNA repair protein rad50 [Botryotinia fuckeliana]
          Length = 1316

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 352/1286 (27%), Positives = 604/1286 (46%), Gaps = 199/1286 (15%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S++  ++D+ +   +GVS+A+L+NVIF HQD++ WP+ +PS LKKKFDDIF 
Sbjct: 121  NGGERTAVSHKVGEIDKIMQTALGVSEAVLDNVIFCHQDDSLWPMSEPSQLKKKFDDIFE 180

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQD-QEKTEALKNQ 134
            AT+YTKA++ +K L KD AQ+IK           + D      ESI++D ++K E  K++
Sbjct: 181  ATKYTKAVDSLKSLKKDYAQQIKGM---------IAD------ESIAKDNKDKGEKTKSR 225

Query: 135  MQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
             +EL   I  +      +E  LKD   M+     + A+++     Q  ++  L +++   
Sbjct: 226  CEELSAQIDQL------SEEALKDKANMEAVREVVDAKQA-----QAAEFWELVQKLRTN 274

Query: 195  DEELKNWKNNFEGIVAK----RESD-------------ISKLEREKNDMDTKIKFLEQNI 237
             E +K  + N E +  +     ESD             I ++E++  ++  + +  +Q +
Sbjct: 275  KERVKFSEENLESLQKRIKPLSESDEWLKSTLDQYADRILEMEQQDEELQKQYRDQQQKV 334

Query: 238  DAYTAEITNLLSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN- 289
             A T E+    ++ G       A+   +  R   ++   ++H +    +    NE+ +N 
Sbjct: 335  SANTTELGKKQADLGRQQALKQAYEEELESRIQLVKSAASKHAIRGYDDDI--NESRVNE 392

Query: 290  FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI-----EAQKQAKMEIK 344
            FI RIR    D ER+LE  K +               N+  KN+     E Q Q  + ++
Sbjct: 393  FIERIRKLSRDKERELERAKTA--------------TNEELKNVQTTLTELQNQHAIRVQ 438

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDERE--------NKMRIEVERKTNQLAEREF 396
              +        NER     Q + L     DE +        N+ +  +E+   Q     +
Sbjct: 439  EKVTAKQTISNNERKVSPKQ-TELGFIQFDEGDKTGLEASHNETKDLLEKLRTQFDGAGW 497

Query: 397  EINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYK 456
            +  I      L  ++ + K+L +E   +   S DR +L     EL+  K K   +   + 
Sbjct: 498  DSRISTSNGRLRELEDEEKSLRKEAFEINKRSNDRAQLDYVMEELKKTKGKLDTMKATHG 557

Query: 457  DKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL 516
             K+  +L     +D  L K+     RAL  E D++S    +A  E  + +    E     
Sbjct: 558  AKLDSILGSDWQVDT-LAKDFQ---RALDREKDEVS----DATNEQEVAKKSHSEAGFRF 609

Query: 517  SKHRKDVDSKKRFIESKLESLNQQIF--------SIDTYQKVLDSAKEKRDVQKSKYNIA 568
            +  R+D+ +KK  +++   ++   I         S++ Y + L+  +E+RD  + + NI 
Sbjct: 610  NALREDLKAKKEQLKACENAVLNSIMIEDMKPLVSVEEYPRELNQLEEERD--EVRDNI- 666

Query: 569  DGMRQMFDPFERV---ARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES 625
            DG +   + F +     +   +C  CER F+ E            A  SA   K+  L +
Sbjct: 667  DGFKHKIEYFTQCLTTIQTKDMCKLCERGFAEE------------AHRSAAMKKIQKLLN 714

Query: 626  SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIK 685
             +A    Q   +L M Y E +K +K     A ++ +++ + L       D++  V  ++K
Sbjct: 715  KDARERLQ--GELEM-YNEQLKTAK-----AAQSQYDIYQSLK------DEIPNVEQEMK 760

Query: 686  ADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEI---------- 735
              ++  + L++ VE  D + +     Q+ V+ L +++ S    +R   +I          
Sbjct: 761  KAEDEKQRLLEEVEHHDSIVERKNARQRDVESLTHIISSI---IRYYSDIMDHEAKIDSL 817

Query: 736  --QLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI-------RWHTLREEKVKAAN 786
              Q  ++GS+ T D++Q       +  R +   LS I         R + +  +  + + 
Sbjct: 818  ASQQSIAGSIMTVDDIQERQTACSENMREVREQLSKISAEKDAAKDRINDVERDLSRKSQ 877

Query: 787  TLRDV------KKA-EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKL---LSDYNDL 836
             LRDV      K+A  +E++ L+E   Q     + +  A   L   K K+    + Y D+
Sbjct: 878  RLRDVIHGLAKKQALRKEIDELLESSTQ---QRETMNHADAELEILKPKIDTAKAKYEDI 934

Query: 837  KVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKS 896
            + + + +  E   QK      +   L+    I  Y D    E     +      + + K 
Sbjct: 935  QQQGHTKEREVRTQKEKLADTVRQFLQHEKSINGYIDNGGPENLAACERAIKSIQQDQKR 994

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
                 + I  +L+  +    + D+++ NI DN+ YR+  AK++ +  +   LE + ++  
Sbjct: 995  IGEEMNGITTDLNALRAKKSDSDRLKTNISDNILYRQELAKLEVYKKQTIDLESQNVE-- 1052

Query: 957  GVSTFETELGKHLLERDRLLSEVNRCQGTM----SVYQTN---ISRNKIDLKQ------A 1003
                F+T           L  E  R Q T      +YQ     +S    +L Q       
Sbjct: 1053 --GNFQT-----------LTKEAERIQATFYEHRRLYQQKTAILSEKDQNLAQYLQDWDL 1099

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
             YK+    +   +I++KTT+ A  DL +   A+DKA+++FH++KMEEIN+I  ELWQ TY
Sbjct: 1100 NYKNARSEYRTAMIKVKTTKAAIDDLGKMITAMDKAIVKFHSVKMEEINRIAGELWQTTY 1159

Query: 1064 RGQDIDYIRIHSDS-EG---AGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            +G D+D I I S+  EG   AG +  +Y Y+V+M   D E++MRGRCSAGQKVLA +IIR
Sbjct: 1160 QGTDVDTIMIRSEKDEGETTAGNKKTNYKYRVVMVKQDVEMDMRGRCSAGQKVLACIIIR 1219

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N ++LA +LH I++ R+ Q NFQLI+ITHDE F 
Sbjct: 1220 LALAECFGINCGLIALDEPTTNLDQDNIKALAQSLHDIIKSRQQQANFQLIIITHDEEFL 1279

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            +++      + +Y+V++D  Q+S IE
Sbjct: 1280 KVMQCSDFCDDFYQVSRDQEQNSKIE 1305


>gi|154320740|ref|XP_001559686.1| hypothetical protein BC1G_01842 [Botryotinia fuckeliana B05.10]
          Length = 1310

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 352/1286 (27%), Positives = 604/1286 (46%), Gaps = 199/1286 (15%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S++  ++D+ +   +GVS+A+L+NVIF HQD++ WP+ +PS LKKKFDDIF 
Sbjct: 115  NGGERTAVSHKVGEIDKIMQTALGVSEAVLDNVIFCHQDDSLWPMSEPSQLKKKFDDIFE 174

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQD-QEKTEALKNQ 134
            AT+YTKA++ +K L KD AQ+IK           + D      ESI++D ++K E  K++
Sbjct: 175  ATKYTKAVDSLKSLKKDYAQQIKGM---------IAD------ESIAKDNKDKGEKTKSR 219

Query: 135  MQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
             +EL   I  +      +E  LKD   M+     + A+++     Q  ++  L +++   
Sbjct: 220  CEELSAQIDQL------SEEALKDKANMEAVREVVDAKQA-----QAAEFWELVQKLRTN 268

Query: 195  DEELKNWKNNFEGIVAK----RESD-------------ISKLEREKNDMDTKIKFLEQNI 237
             E +K  + N E +  +     ESD             I ++E++  ++  + +  +Q +
Sbjct: 269  KERVKFSEENLESLQKRIKPLSESDEWLKSTLDQYADRILEMEQQDEELQKQYRDQQQKV 328

Query: 238  DAYTAEITNLLSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN- 289
             A T E+    ++ G       A+   +  R   ++   ++H +    +    NE+ +N 
Sbjct: 329  SANTTELGKKQADLGRQQALKQAYEEELESRIQLVKSAASKHAIRGYDDDI--NESRVNE 386

Query: 290  FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI-----EAQKQAKMEIK 344
            FI RIR    D ER+LE  K +               N+  KN+     E Q Q  + ++
Sbjct: 387  FIERIRKLSRDKERELERAKTA--------------TNEELKNVQTTLTELQNQHAIRVQ 432

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDERE--------NKMRIEVERKTNQLAEREF 396
              +        NER     Q + L     DE +        N+ +  +E+   Q     +
Sbjct: 433  EKVTAKQTISNNERKVSPKQ-TELGFIQFDEGDKTGLEASHNETKDLLEKLRTQFDGAGW 491

Query: 397  EINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYK 456
            +  I      L  ++ + K+L +E   +   S DR +L     EL+  K K   +   + 
Sbjct: 492  DSRISTSNGRLRELEDEEKSLRKEAFEINKRSNDRAQLDYVMEELKKTKGKLDTMKATHG 551

Query: 457  DKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL 516
             K+  +L     +D  L K+     RAL  E D++S    +A  E  + +    E     
Sbjct: 552  AKLDSILGSDWQVDT-LAKDFQ---RALDREKDEVS----DATNEQEVAKKSHSEAGFRF 603

Query: 517  SKHRKDVDSKKRFIESKLESLNQQIF--------SIDTYQKVLDSAKEKRDVQKSKYNIA 568
            +  R+D+ +KK  +++   ++   I         S++ Y + L+  +E+RD  + + NI 
Sbjct: 604  NALREDLKAKKEQLKACENAVLNSIMIEDMKPLVSVEEYPRELNQLEEERD--EVRDNI- 660

Query: 569  DGMRQMFDPFERV---ARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLES 625
            DG +   + F +     +   +C  CER F+ E            A  SA   K+  L +
Sbjct: 661  DGFKHKIEYFTQCLTTIQTKDMCKLCERGFAEE------------AHRSAAMKKIQKLLN 708

Query: 626  SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIK 685
             +A    Q   +L M Y E +K +K     A ++ +++ + L       D++  V  ++K
Sbjct: 709  KDARERLQ--GELEM-YNEQLKTAK-----AAQSQYDIYQSLK------DEIPNVEQEMK 754

Query: 686  ADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEI---------- 735
              ++  + L++ VE  D + +     Q+ V+ L +++ S    +R   +I          
Sbjct: 755  KAEDEKQRLLEEVEHHDSIVERKNARQRDVESLTHIISSI---IRYYSDIMDHEAKIDSL 811

Query: 736  --QLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI-------RWHTLREEKVKAAN 786
              Q  ++GS+ T D++Q       +  R +   LS I         R + +  +  + + 
Sbjct: 812  ASQQSIAGSIMTVDDIQERQTACSENMREVREQLSKISAEKDAAKDRINDVERDLSRKSQ 871

Query: 787  TLRDV------KKA-EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKL---LSDYNDL 836
             LRDV      K+A  +E++ L+E   Q     + +  A   L   K K+    + Y D+
Sbjct: 872  RLRDVIHGLAKKQALRKEIDELLESSTQ---QRETMNHADAELEILKPKIDTAKAKYEDI 928

Query: 837  KVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKS 896
            + + + +  E   QK      +   L+    I  Y D    E     +      + + K 
Sbjct: 929  QQQGHTKEREVRTQKEKLADTVRQFLQHEKSINGYIDNGGPENLAACERAIKSIQQDQKR 988

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
                 + I  +L+  +    + D+++ NI DN+ YR+  AK++ +  +   LE + ++  
Sbjct: 989  IGEEMNGITTDLNALRAKKSDSDRLKTNISDNILYRQELAKLEVYKKQTIDLESQNVE-- 1046

Query: 957  GVSTFETELGKHLLERDRLLSEVNRCQGTM----SVYQTN---ISRNKIDLKQ------A 1003
                F+T           L  E  R Q T      +YQ     +S    +L Q       
Sbjct: 1047 --GNFQT-----------LTKEAERIQATFYEHRRLYQQKTAILSEKDQNLAQYLQDWDL 1093

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
             YK+    +   +I++KTT+ A  DL +   A+DKA+++FH++KMEEIN+I  ELWQ TY
Sbjct: 1094 NYKNARSEYRTAMIKVKTTKAAIDDLGKMITAMDKAIVKFHSVKMEEINRIAGELWQTTY 1153

Query: 1064 RGQDIDYIRIHSDS-EG---AGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            +G D+D I I S+  EG   AG +  +Y Y+V+M   D E++MRGRCSAGQKVLA +IIR
Sbjct: 1154 QGTDVDTIMIRSEKDEGETTAGNKKTNYKYRVVMVKQDVEMDMRGRCSAGQKVLACIIIR 1213

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N ++LA +LH I++ R+ Q NFQLI+ITHDE F 
Sbjct: 1214 LALAECFGINCGLIALDEPTTNLDQDNIKALAQSLHDIIKSRQQQANFQLIIITHDEEFL 1273

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            +++      + +Y+V++D  Q+S IE
Sbjct: 1274 KVMQCSDFCDDFYQVSRDQEQNSKIE 1299


>gi|238880625|gb|EEQ44263.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1332

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 347/1271 (27%), Positives = 599/1271 (47%), Gaps = 156/1271 (12%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K +E  L  I    G+K+ +S + A++D ++P  +G S AILENVIF HQDE+ WPL
Sbjct: 138  VTFKTLEGQLAII--EKGDKISVSSKNAELDAQIPVYLGASPAILENVIFCHQDESLWPL 195

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFDDIF A+++TK L+  K + KD A +IK  +  + +L+  K+ A K+++ 
Sbjct: 196  SEPSALKKKFDDIFEASKFTKVLDNFKSIKKDMATDIKLIEQSVNHLKIDKERAKKVQDK 255

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +    E  E    ++ +L   I+  + +      T ++ ++       +  ++  L EQ 
Sbjct: 256  LHNMNESVEKYTEEITDLNIQIEKKEKQAEELFATNQEFQRTLSDYENLLTKKQALEEQI 315

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            ++   ++ E + D DEEL N + NF  I  ++ + I  L+ +   +  ++K         
Sbjct: 316  ERLKTSI-EILPDNDEELLNRQENFSAITTEKSNRIDDLQLQSTKLSDELK-------NK 367

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKL--FARHNLGSLPNAPFSNEAALNF------IN 292
            T +   L+   G+  ++  E DS  +KL      N     N   SN+   N       +N
Sbjct: 368  TKQYNELIRLDGSFKAKKAEYDSNWEKLSEIVDKNAKDF-NVQISNDRVRNVAMFKTELN 426

Query: 293  RIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWK------------NIEAQKQAK 340
            +  + L + ++DL    K  E   + A    L++  R +            N E     K
Sbjct: 427  KRHNTLLNEQKDLLVDNKRKESEKQSALQDVLNSISREEQHHEYATNVINTNNEKLSVLK 486

Query: 341  MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
             +++ G    I E E +R+  EL +  L       +E K   EV +   ++ E   EI+ 
Sbjct: 487  RKVEVGSNNEI-ELEEKRNDLELTMKLL-------QEKKDLNEVRKLDAKIMECNSEIS- 537

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
             + + EL  + +K+   N++ D+       R K+   +   ++ K +  KI         
Sbjct: 538  -KLEFELDELAKKLSTSNKQSDL-------RSKVLFLEESAKSKKAELSKIFATIDSSYF 589

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
            DVL  +L +D      + ++L  L  +  +L  KS E  K+V  L+ ++Q        ++
Sbjct: 590  DVLGSKLDVD------VGESL--LSQKISNLEIKSEEQQKKVGSLESELQ-------INK 634

Query: 521  KDVDSKKRFIE---SKLESLNQQIFS------IDTYQKVLDSAKEKRDVQKSKYNIADGM 571
              ++S  + IE   SK++SL   I        I+ Y+ V++  ++         N A+  
Sbjct: 635  NSIESILKTIEENNSKIDSLKSNITKVIGEDEINDYENVVNDLEDSYRNVSEDVNSAEVT 694

Query: 572  RQMFDPFERVARAHHVCPCCERPFSAEEEDEFV---------------KKQRVKAASSAE 616
            R   +     A  +  C  C+R F       F+               ++Q ++     E
Sbjct: 695  RDFKNSAISFAEENKCCLLCKRLFEQGGLGSFIQDLKQSVDEHKIQEIREQSLEIKKELE 754

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDD 676
             +K ++LE  N       +       +E V  S +     E  L +  +E      + D+
Sbjct: 755  DVKSINLEVVNYRECLANVQNFECKLKELVDKSSQI----ENELEQQRKEQQTIKHSLDN 810

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ 736
             L               L +P+  A R+  E+   + Q+D+L   L   G  V +++E+Q
Sbjct: 811  ALS--------------LKKPLSDATRIHLEVSEIEFQLDELNEDLSGFGGSVVSVDELQ 856

Query: 737  LE--------------LSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKV 782
             +              L+    +K   Q EL+KL +  +  +  +SN++     +   K 
Sbjct: 857  KQQQDINLKIKKTRQDLNDYTESKYKAQRELQKLENRVKDTKLQISNLERSLAEVTGIKN 916

Query: 783  KAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR 842
              +     V+ +EE+L+ +     +L +D+++ + A           L D  +     NR
Sbjct: 917  NISEAEDIVRSSEEKLKQIKTSLEELQVDKQVKSNA-----------LRDTQNS----NR 961

Query: 843  EYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTD 902
            + E++ +Q++    ++       +    Y++    E+++    +  +   +  S + + D
Sbjct: 962  DSEQKMQQEVEKCHQLLTSFTSLNDAVTYFETNVAEKYEANALEMKELSEQCTSLETKID 1021

Query: 903  EILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE 962
            E   E+   +  V +  +I  NI  N++YR          S++  LEE  L++G +   +
Sbjct: 1022 EHAQEIKLLEKEVMDASRIEHNILANIDYR----------SQLSRLEETELQLGSMDIED 1071

Query: 963  TELGKHLLE------RDRLLSEVNRCQGTMS-VYQT--NISRNKIDLKQAQYKDIDKRHF 1013
             +  K   +      RD L S      G +  V Q    I+  K +L + +YK++++ + 
Sbjct: 1072 AQSRKEEYQVESKKLRDALSSLTAEHAGKIGEVKQIKDQIASLKKEL-ETEYKNVNQSYH 1130

Query: 1014 DQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI 1073
            ++ I+L+T  + + D+  Y  ALD  +M++H+MKMEEIN+I+ ELW QTY+G DI  I I
Sbjct: 1131 EEWIKLQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQTYKGSDISTIAI 1190

Query: 1074 HSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGIL 1131
             SD   +  G RSY+Y+V+M    +EL+MRGRCSAGQKVLAS++IRLALAE F  NCG++
Sbjct: 1191 KSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQKVLASILIRLALAECFGANCGMI 1250

Query: 1132 ALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYR 1191
            ALDEPTTNLD  NAE+LAAAL+RI+E RK Q NFQLIVITHDE+F   I   +  + +YR
Sbjct: 1251 ALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLIVITHDEKFLTHIQGDRFTDHFYR 1310

Query: 1192 VAKDDHQHSII 1202
            + +D+   S I
Sbjct: 1311 IQRDESSKSRI 1321


>gi|448122948|ref|XP_004204571.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
 gi|448125219|ref|XP_004205129.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
 gi|358249762|emb|CCE72828.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
 gi|358350110|emb|CCE73389.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
          Length = 1308

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 351/1266 (27%), Positives = 614/1266 (48%), Gaps = 166/1266 (13%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G K  +S + +++   VP  +GVS+AIL+ VIF HQD++ WPL + S LKK+FDDIF A+
Sbjct: 127  GNKTTMSTKNSELYSSVPMYLGVSRAILDYVIFCHQDDSLWPLSEASVLKKRFDDIFEAS 186

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            ++TK L+ +K + KD   +IK     +++L+  K+ A K+ E ++               
Sbjct: 187  KFTKVLDNLKTIRKDMTTDIKLIDQSVQHLKIDKNRAKKINEKVT--------------- 231

Query: 138  LEKSIQDIDDKIHH--TELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTD 195
               S+ D+ +K      ELT+        QI    +   +LF+  Q+    LA+  E  +
Sbjct: 232  ---SLNDLVEKYSSEIAELTV--------QIEKRESEAESLFQANQEFQETLAK-YEQLN 279

Query: 196  EELKNWKNNFEGIVA----KRESDISKLEREKNDMDTKIKFLEQNIDAYTA-------EI 244
              LK++K+  E + +      E D   LE E N+ +T ++   +NI+  T        E+
Sbjct: 280  FTLKSYKDQIERLTSTIKISSEPDDVILE-ELNNFETNVENANRNIEDLTKSRNTQIQEL 338

Query: 245  TNLLSEAGAHM---SRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
            +NL +E  + +     +  ++S   K   +  L SL         AL+F     S+L  +
Sbjct: 339  SNLRNEQNSFIRNEGSLRSKESEFHK--NKEKLASL---------ALDF-----SKLHQI 382

Query: 302  ER-DLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEK------ 354
            +  ++ D +K     +K   D     ++ +  +      ++E+K  + +  K        
Sbjct: 383  DSMEINDDEKRVNNVMKRMQDEVEKLDEAYNEMTTNNSEQLEVKEALYQDTKSSISREEQ 442

Query: 355  -----ENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA 409
                 ++E++    +++NL  S  + R    ++E+E+   ++ +   +++ ++ Q +L A
Sbjct: 443  NLQYCQSEQNKIINKLANLRKSTEESRGLDNKLELEK--TEIEQLSLKLDEKRSQLDLVA 500

Query: 410  MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKI--IDEYKDKIRDVLKGRL 467
            + + I  L+   + L  + E+   L+ K          H +I  I E  D  +  L   +
Sbjct: 501  LQRSIDDLSSSVNHLEFECEE---LSRKIVSSNKSSDIHARISLISEEIDVKKKTLNNII 557

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQ-EVTDNLSKHRKDVDSK 526
               RDL + +T  L      FD   S   +  K+++ L+ K+  E+ D+LS   +  +S 
Sbjct: 558  SNQRDLFESVTNQL------FD--ISNCEKIIKDLSSLKQKMSDELRDSLSSIERKKNSL 609

Query: 527  KRFIESKLESLNQQIFS----------------IDTYQKVLDSAKEKRDVQKSKYNIADG 570
            +  ++SK E LN +                   I +++K+L+  +E   + +   N  + 
Sbjct: 610  ETLLKSKEELLNAKKLQTANQLKTISNELSKEEISSFEKILEEVQENYHITQEALNTFEV 669

Query: 571  MRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADS 630
             +Q       VA + + C  C R F +    +F+    +KA    + M V  LE  N ++
Sbjct: 670  SKQFKIKAIGVAESSNNCALCLRDFDSPGLKKFL--DFLKA--DVKKMDVKELED-NLNT 724

Query: 631  YFQQLDKLRMVYE---EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD 687
              ++LD +R V+    EY KL+ E   ++++ +  L  ++  +  A    + +   +  D
Sbjct: 725  SKKELDSIRSVHSNVIEYRKLNDECEALSQE-IEMLKTQISDQDNALRSKVDLKEPLNRD 783

Query: 688  KESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ----------- 736
              +++ L + V     L  +I    K + +L   L   G   ++++++Q           
Sbjct: 784  IGNLDTLRKNVSDLISLNDDIISKTKGLTELRDQLMVYGTSDQSLDDLQKAQTEKNDKIK 843

Query: 737  ---LELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
                +LS  +  K + Q ++ +L +E +     +SNI         EK+   NT  ++K 
Sbjct: 844  DLRRQLSERVDLKYSAQRDISRLENEMKDKRLSISNI---------EKLLMNNT--NIKT 892

Query: 794  AEEELEHLMEEKGQLDLDEKLLAEASGPLSK---EKEKLLSDYNDLKVKLNREYEEQAEQ 850
            +  + E  +EE  Q    EK   E  G L     EKEK + +Y + +VK   + E +A +
Sbjct: 893  SIRDCEENLEELKQ---REKKHHEVLGKLKSSFLEKEKDMKEYRN-RVK---QIETEASE 945

Query: 851  KINFQQEIEMLLKIASKIKEYYD--LRKDE-RFKELQEKKSQSESEVKSCKIRTDEILVE 907
            K+    E + LL+  + I++  D  ++ D  + + + +K   SE  +   +    ++ +E
Sbjct: 946  KL---HETKSLLENFTLIRQNIDQYIKHDSAQLETITKKLKASEERISELEKDIKKLELE 1002

Query: 908  LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGK 967
            +   + ++     I+  + DNL  R ++ +++    +IE L      I      + +  K
Sbjct: 1003 IKEKEKVLSESSNIKSELRDNLELRNSQREIESIQVQIEEL-----NISDAQEKKEDYHK 1057

Query: 968  HLLERDRLLSEVNRCQ----GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTE 1023
                   LL+++N       G +   +  I   + +L   +YKD+D R  ++ I+L+T  
Sbjct: 1058 KSRNIRDLLTQLNADHAGKVGEIRQMKDQIRSLRSELMH-EYKDVDSRFHEEWIKLQTNM 1116

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAG 1081
            + + D+  Y  ALD A+M++H MKMEEIN+I+ ELW QTYRG DID I I SD   +  G
Sbjct: 1117 LVSNDIQTYSRALDNAIMKYHGMKMEEINRILAELWSQTYRGTDIDSIAIKSDVSVQSKG 1176

Query: 1082 TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             RSY+Y+V+M     EL+MRGRCSAGQKVL S++IRLALAE F  NCG++ALDEPTTNLD
Sbjct: 1177 NRSYNYRVVMYRQSTELDMRGRCSAGQKVLTSILIRLALAECFGTNCGVIALDEPTTNLD 1236

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSI 1201
              NAESLA AL++I+E RK Q NFQLIVITHDE+F   I   +  + +YRV +D+ Q S+
Sbjct: 1237 QENAESLAQALNKIIEFRKNQRNFQLIVITHDEKFLSHINGDRFTDHFYRVQRDELQKSV 1296

Query: 1202 IEAQEI 1207
            I +  I
Sbjct: 1297 IRSLPI 1302


>gi|85111188|ref|XP_963818.1| hypothetical protein NCU00901 [Neurospora crassa OR74A]
 gi|28925556|gb|EAA34582.1| conserved hypothetical protein [Neurospora crassa OR74A]
 gi|38636462|emb|CAE81997.1| RAD50 homolog uvs-6 [Neurospora crassa]
          Length = 1314

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 336/1251 (26%), Positives = 608/1251 (48%), Gaps = 124/1251 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G++  LS R  D+++ VP  +GVS A+L+ VIF HQDE+ WP+   + LKK+FD+IF A 
Sbjct: 122  GDRQVLSTRVVDLNKLVPEKLGVSPAVLDAVIFCHQDESLWPMSPGADLKKRFDEIFEAK 181

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +Y K ++ IK L K + +E++  +++    +  K+ A K+   +S+   + +  +++  E
Sbjct: 182  KYAKVIDNIKLLRKTKGEELRLLRMQEAQDKENKERADKVDRELSKLIRELQEDRDKCNE 241

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT--- 194
            L+K I+D D +I           K+ +++ T   +     E ++   A L E IE++   
Sbjct: 242  LQKQIEDEDVRIKQKWEQANSFLKIVNELQTKQEK----LEYKKDAIAELRERIEESTES 297

Query: 195  DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
            DE L++  + +E  V +  SD       ++    +   L+  +    A+ T  + E G H
Sbjct: 298  DEYLRDVLSQYEQTVKRMNSD-------RDQKVAQFGTLQTELKTARAKHTAKVEEQGKH 350

Query: 255  MSRMNERD-------STIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE- 306
             S   + D         IQ+   +H +    +    ++    F  RI+  L D +RDLE 
Sbjct: 351  QSDKEKYDRQLVSQRQMIQEAAEKHEIRGY-DGDLDDQEINAFYERIQKMLQDTKRDLER 409

Query: 307  -DKKKSDELALKMAWDSYLDAND----RWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
              +  + EL  K A  + L+++     R + I +Q+ A ++               RD  
Sbjct: 410  LQRDNAAELDAKSATITELESHKASRIRDRKISSQRVATLQ---------------RDIT 454

Query: 362  ELQISNLNLSHIDERENKM----------RIEVERKTNQLAEREFEINIRQKQSELFAMD 411
            +LQ   LN   +DE    +          +I+  +  N+++E   +  I +  +E+  ++
Sbjct: 455  KLQ-GELNNLDVDEGAEAVLQTEMEGLESKIKAAKADNRVSE--LDSQITKLNNEVLTLE 511

Query: 412  QKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDR 471
             +   L+RE       + +R +L L+K +L   K++   + + +  ++ DV+ GR     
Sbjct: 512  AQGAQLSRELVECTNLASERAQLELRKKQLTERKRELDILKNTFNQQLTDVV-GRNWTPE 570

Query: 472  DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE 531
             ++ +  +ALR L     +L        +E+  ++ K+    +   K  K+ DS K+ + 
Sbjct: 571  TIESDFQKALRQLSDRLSELRKTKDSTQQELKQVEYKLTTAREQQIKSVKERDSCKKDVL 630

Query: 532  SKLESLNQQ----IFSIDTYQKVLDSAKEKRDVQK---SKYNIADGMRQMFDPFERVARA 584
              L+ + +Q      S+D Y    D+ KE   + K   +   +   +++ F   +  A  
Sbjct: 631  EALKKVPRQNKPVTESVDDYP---DAVKEIEKLLKDTDTDLELNMYLKEYFLKAKVKAEE 687

Query: 585  HHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEE 644
             H C  CE+    E+  + + K R++     +    L  + +    +   L  +R  +E 
Sbjct: 688  KHKCYLCEQSLGDEKTMKRLMK-RIQDKIDDKDRDELLEDQALYGRHLGTLRSVRTKHET 746

Query: 645  YVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
            Y +L KE +P   + ++ LT + ++  +  +D  G     +  + + +VL + V    + 
Sbjct: 747  YGRLCKE-LPSMVEEINSLTLQKERLVRQLEDQDGAFKIAEEKRNAADVLSKSVLKIAQT 805

Query: 705  FQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYME 764
             ++I   ++ +   E    +    VR+ +EI  + +         Q +L K   E++ ++
Sbjct: 806  VKDIADSERHI---ERAQQNSSNQVRSADEINDDQTTCAEQLRIAQAKLSKSTAERQRLK 862

Query: 765  NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL-----DLDEKL----- 814
            +  + +++    L+ +  +A   L   K+ ++ +++  +E+ +L     D+D+++     
Sbjct: 863  DLAAQLEVEKLELKHKITEAVQKLEHKKRLQDTIKNHRDEQSELRKNMQDIDKEVEGIDP 922

Query: 815  -LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQ-AEQKINFQQEIEMLLKIASKIKEYY 872
             +A A   L + +            K  R  E++ AE++      +  L  I  +I++Y 
Sbjct: 923  EIASARAALEESR------------KQGRAREQRIAEERDGIATTVSELKIINREIQDYL 970

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            D          Q   +  ES + + +    ++ +++++    + N D  RRNI DNL YR
Sbjct: 971  DRGGPANLASNQRTIASLESTIAALEKEMKDVTIQINKLNKEIDNSDAKRRNIADNLTYR 1030

Query: 933  ETKAKVDKFASEIESLEERVLK------IGGVSTFETELGKHLLERDRLLSEVNRCQGTM 986
            +   + D    EIE LE R  +      +    +FE   GK   ER RL+       G+M
Sbjct: 1031 KNLRERDALEEEIEELESRNAQEDYDRLVEEAHSFELYRGKLNAERQRLM-------GSM 1083

Query: 987  SVYQTNISR----NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
            S       R     +I+LK A+      R+ +  I+++TT+ A +DL +   ALD A+M+
Sbjct: 1084 STKDEQFRRLEEEYEIELKGARA-----RYKESHIKVETTKAAIEDLAQGNMALDHAIMQ 1138

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS--DSEGAGT----RSYSYKVLMQTGDA 1096
            +H++KMEEIN+ I +LWQ TY+G DID I+I S  +S  +G     R Y+Y+V M  GD 
Sbjct: 1139 YHSLKMEEINRTIADLWQSTYQGTDIDTIQIRSYMESTASGATNTRRVYNYRVSMIKGDT 1198

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGRCSAGQKVLA +IIRLALAE+F  NCG++ALDEPTTNLD  N  SLA +LH I+
Sbjct: 1199 EMDMRGRCSAGQKVLACIIIRLALAESFGANCGMIALDEPTTNLDSDNIRSLAESLHAII 1258

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + R+ Q NFQLIVITHDE F + +      + ++RV +D++Q+S+I  + I
Sbjct: 1259 KARRSQNNFQLIVITHDEEFLKHMQCSDFCDSFFRVKRDENQNSVITRESI 1309


>gi|68468331|ref|XP_721725.1| hypothetical protein CaO19.1648 [Candida albicans SC5314]
 gi|68468574|ref|XP_721606.1| hypothetical protein CaO19.9217 [Candida albicans SC5314]
 gi|46443529|gb|EAL02810.1| hypothetical protein CaO19.9217 [Candida albicans SC5314]
 gi|46443657|gb|EAL02937.1| hypothetical protein CaO19.1648 [Candida albicans SC5314]
          Length = 1332

 Score =  319 bits (817), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 352/1279 (27%), Positives = 603/1279 (47%), Gaps = 172/1279 (13%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K +E  L  I    G+K+ +S + A++D ++P  +G S AILENVIF HQDE+ WPL
Sbjct: 138  VTFKTLEGQLAII--EKGDKISVSSKNAELDAQIPVYLGASPAILENVIFCHQDESLWPL 195

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
             +PS LKKKFDDIF A+++TK L+  K + KD A +IK  +  + +L+  K+ A K+++ 
Sbjct: 196  SEPSALKKKFDDIFEASKFTKVLDNFKSIKKDMATDIKLIEQSVNHLKIDKERAKKVQDK 255

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +    E  E    ++ +L   I+  + +      T ++ ++       +  ++  L EQ 
Sbjct: 256  LHNMNESVEKYTEEITDLNIQIEKKEKQAEELFATNQEFQRTLSDYENLLTKKQALEEQI 315

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            ++   ++ E + D DEEL N + NF  I  ++ + I  L+ +   +  ++K         
Sbjct: 316  ERLKTSI-EILPDNDEELLNRQENFSAITTEKSNRIDDLQLQSTKLSDELK-------NK 367

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKL--FARHNLGSLPNAPFSNEAALNF------IN 292
            T +   L+   G+  ++  E DS  +KL      N     N   SN+   N       +N
Sbjct: 368  TKQYNELIRLDGSFKAKKAEYDSNWEKLSEIVDKNAKDF-NVQISNDRVRNIAMFKTELN 426

Query: 293  RIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWK------------NIEAQKQAK 340
            +  + L + ++DL    K  E   + A    L++  R +            N E     K
Sbjct: 427  KRHNTLLNEQKDLLVDNKRKESERQSALQDVLNSISREEQHHEYATNVINTNNEKLSVLK 486

Query: 341  MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINI 400
             +++ G    I E E +R+  EL +  L       +E K   EV +   ++ E   EI+ 
Sbjct: 487  RKVEVGSNNEI-ELEEKRNDLELTMKLL-------QEKKDLNEVRKLDAKIMECNTEIS- 537

Query: 401  RQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
             + + EL  + +K+   N++ D+       R K+   +   ++ K +  KI         
Sbjct: 538  -KLEFELDELAKKLSTSNKQSDL-------RSKVLFLEESAKSKKAELSKIFATIDSSYF 589

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
            DVL  +L +D      + ++L  L  +  +L  KS E  K+V  L+ ++Q        ++
Sbjct: 590  DVLGSKLDVD------VGESL--LSQKISNLEIKSEEQQKKVGSLESELQ-------INK 634

Query: 521  KDVDSKKRFIE---SKLESLNQQIFS------IDTYQKVLDSAKEKRDVQKSKYNIADGM 571
              ++S  + IE   SK++SL   I        I+ Y+ V++  ++         N A+  
Sbjct: 635  NSIESILKTIEENNSKIDSLKSNITKVIGEDEINDYENVVNDLEDSYRNVSEDVNSAEVT 694

Query: 572  RQMFDPFERVARAHHVCPCCERPFSAEEEDEFV---------------KKQRVKAASSAE 616
            R   +     A  +  C  C+R F       F+               ++Q ++     E
Sbjct: 695  RDFKNSAISFAEENKCCLLCKRLFEQGGLGSFIQDLKQSVDEHKIQEIREQSLEIKKELE 754

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDD 676
             +K ++LE  N       +       +E V  S +     E  L +  +E      + D+
Sbjct: 755  DVKSINLEVINYRECLANVQNFECKLKELVDKSSQI----ENELEQQRKEQQTIKHSLDN 810

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ 736
             L               L +P+  A R+  E+   + Q+D+L   L   G  V +++E+Q
Sbjct: 811  ALS--------------LKKPLSDATRIHLEVSEIEFQLDELNEDLSGFGGSVVSVDELQ 856

Query: 737  LE--------------LSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKV 782
             +              L+    +K   Q EL+KL +  +  +  +SN++     +   K 
Sbjct: 857  KQQQDINLKIKKTRQDLNDYTESKYKAQRELQKLENRVKDTKLQISNLERSLAEVTGIKN 916

Query: 783  KAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR 842
              +     V+ +EE+L+ +     +L +D+++ + A           L D  +     NR
Sbjct: 917  NISEAEDIVRSSEEKLKQIKTSLEELQVDKQVKSNA-----------LRDTQNS----NR 961

Query: 843  EYEEQAEQKI--------NFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEV 894
            + E++ +Q++        +F    + +    + I + Y+    E  KEL E+ +  E+++
Sbjct: 962  DTEQEMQQEVEKCHQLLTSFTSLNDAVTYFETNIADKYEANALE-MKELSEQCTSLETKI 1020

Query: 895  KSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK 954
                   D+   E+   +  V +  +I  NI  N++YR          S++  LEE  L+
Sbjct: 1021 -------DDHAQEIKSLEKEVMDASRIEHNILANIDYR----------SQLSRLEETELQ 1063

Query: 955  IGGVSTFETELGKHLLE------RDRLLSEVNRCQGTMS-VYQT--NISRNKIDLKQAQY 1005
            +G +   + +  K   +      RD L S      G +  V Q    I+  K +L + +Y
Sbjct: 1064 LGSMDIEDAQSRKEEYQVESKKLRDALSSLTAEHAGKIGEVKQIKDQIASLKKEL-ETEY 1122

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            K++++ + ++ I+L+T  + + D+  Y  ALD  +M++H+MKMEEIN+I+ ELW QTY+G
Sbjct: 1123 KNVNQSYHEEWIKLQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQTYKG 1182

Query: 1066 QDIDYIRIHSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAET 1123
             DI  I I SD   +  G RSY+Y+V+M    +EL+MRGRCSAGQKVLAS++IRLALAE 
Sbjct: 1183 SDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQKVLASILIRLALAEC 1242

Query: 1124 FCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR 1183
            F  NCG++ALDEPTTNLD  NAE+LAAAL+RI+E RK Q NFQLIVITHDE+F   I   
Sbjct: 1243 FGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLIVITHDEKFLTHIQGD 1302

Query: 1184 QHAEKYYRVAKDDHQHSII 1202
            +  + +YR+ +D+   S I
Sbjct: 1303 RFTDHFYRIQRDESSKSRI 1321


>gi|255947060|ref|XP_002564297.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591314|emb|CAP97541.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1294

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 357/1283 (27%), Positives = 585/1283 (45%), Gaps = 200/1283 (15%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKK         
Sbjct: 115  GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKK--------- 165

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            R+ +  E +K            Y   ++N++ L+             +++ E L  + + 
Sbjct: 166  RFDEIFEAMK------------YTKAIDNIKALR-------------KKQNEEL-GKFKI 199

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
            +E+  ++  DK    E   K   K+QD+I  +      +  Q+ ++ A LA++     E 
Sbjct: 200  MEQHAKEDKDKADRAE---KRSVKLQDEIEALREETQKM-SQEMRRVAELADKAWTQSES 255

Query: 198  LKNWKNNFEG--IVAKR-ESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
                    EG  I AK  ++ I  L+R   ++D   ++LE  ++ +  +      +  +H
Sbjct: 256  YAQVLGALEGKRIEAKSIQTTIDNLKRHLVELDESDEWLESTLEQFETKQLQYQQQEESH 315

Query: 255  MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNF----------------INRIR--- 295
                 E    I++   R  L    N  F N+ A NF                 N IR   
Sbjct: 316  KENYMEIKERIEQTRHRLGLKQAENGKFENDKA-NFERQSQRRQSMINEIARANNIRGLD 374

Query: 296  ---------SRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAG 346
                     + +  ++R L D+ +S +   + A     +  +    I   K A  E K  
Sbjct: 375  ETMGQSEIDTFMQKIKRLLRDQNQSLDRVKREAQKELREVQETLNEIGQTKSALQETKNA 434

Query: 347  ILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSE 406
              + I   + E  +++     LN   +DE     +  +E K   +  R   +   +++++
Sbjct: 435  AKRQIAANDKEATTYQ---KKLNEIEVDE---GFQAALESKVEDITSR---LEHAKERAK 485

Query: 407  LFAMDQKIKALNREKDVLAGDSE-------DRVKLALKKAELENHKKKHK---KIIDEYK 456
                DQ I+  N E   L  +S        D  K A + A L++ KK+ K   + +   K
Sbjct: 486  TAPWDQDIQDTNAEIRRLEDESSRLNTELIDSTKKAGELARLDHLKKESKDRERSLQTMK 545

Query: 457  DKIRDVLKGRLPLD---RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVT 513
                D LK  +  D     L++   QAL +   +  D   +     +E+  ++ K++   
Sbjct: 546  GAHGDRLKKVVGPDWKPETLERGFQQALDSESKQVADAERERDGVSRELEHVEFKLKTAK 605

Query: 514  DNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQ 573
             NL + +K++D   + I   +++   +      Y +++   + + D+ +   +   GM +
Sbjct: 606  KNLKQRQKELDECVKEIHEAVDAEPSE------YPEIVKERQAQYDLARKDADQYAGMGE 659

Query: 574  MFDPFERVARAHHVCPCCERPFSAEEE--------DEFVKKQRVKAASSAEHMKVL--SL 623
                    A+   +C  C+R F  E E        D  VKK  + A    E +K L   L
Sbjct: 660  YLTKCLDAAKRTKLCRTCQRSFKNEAELQTFTKKLDALVKKAGLDAED--ETLKGLEEDL 717

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQ 683
            E++ A S           Y+ +V+LS+  IP  E+   E   + DQ  +  +   G +++
Sbjct: 718  ETARAAS---------ASYDTWVRLSETVIPELEQEEQECESQRDQLLEKLETQDGKVSE 768

Query: 684  IKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLE----- 738
                K  VE L + V T  R   EI+  + Q+ +L           RT+E+IQ E     
Sbjct: 769  KTESKRDVEGLAKTVSTIARYDAEIKTIKSQIQELSAKQQD-ASTARTLEDIQEEIASIN 827

Query: 739  ---------LSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWH-----TLREEKVKA 784
                     LS   + K+  ++E+ KL  E R ++++L N + +       T+R E+ K 
Sbjct: 828  EKSRELKKTLSKVTNEKEKTRSEINKLELEFRDVKSNLDNAKFQLEKKADLTVRMEEFKK 887

Query: 785  ANTLR--DVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNR 842
             N  +   ++KA+ ++E+L          E L A+A              Y+D+  + + 
Sbjct: 888  LNNQQREAIEKADRDIENLT--------PELLQAQAR-------------YDDISQRAD- 925

Query: 843  EYEEQAEQKINFQQEIEML------LKIASKIKEYYDLRKD----ERFK-ELQEKKSQSE 891
                  E++ + Q EI  L      L +A+     Y+ R      ER K ELQE     E
Sbjct: 926  ------ERERDLQHEISRLSENIHQLDLANDDINSYNQRGGPGQLERSKKELQE----IE 975

Query: 892  SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER 951
            +E+   +    EI  E+++    +++ +  +R   DNL YR+    ++    E+E LE  
Sbjct: 976  AEIGKLEADQSEITREINKISTQLKDSENTKRQYSDNLTYRQATRSLNTVVEEVEQLE-- 1033

Query: 952  VLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQ------AQY 1005
                      E + G+   E +R   E N      +     +      L Q        Y
Sbjct: 1034 ------AQNAEVDRGRFKQESERWTREHNALAAKQASKMGEMKSKDDQLMQLLADWNTDY 1087

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            KD   ++ +  I+++TT+ A +DL RY  ALDKA+M++H +KM EIN I  ELWQ+TYRG
Sbjct: 1088 KDAASKYKESHIKVETTKAAVEDLARYGGALDKAIMQYHGLKMAEINAIAGELWQKTYRG 1147

Query: 1066 QDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
             D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIRLALAE F
Sbjct: 1148 TDVDTILIRSDNENAKGNRSYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECF 1207

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ 1184
             +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +    
Sbjct: 1208 GVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMQCGD 1267

Query: 1185 HAEKYYRVAKDDHQHSIIEAQEI 1207
             ++ YYRV++++ Q SIIE Q I
Sbjct: 1268 FSDYYYRVSRNERQKSIIERQSI 1290


>gi|12597247|dbj|BAB21523.1| UVS6 [Neurospora crassa]
          Length = 1314

 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 336/1251 (26%), Positives = 607/1251 (48%), Gaps = 124/1251 (9%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G++  LS R  D+++ VP  +GVS A+L+ VIF HQDE+ WP+   + LKK+FD+IF A 
Sbjct: 122  GDRQVLSTRVVDLNKLVPEKLGVSPAVLDAVIFCHQDESLWPMSPGADLKKRFDEIFEAK 181

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +Y K ++ IK L K + +E++  +++    +  K+ A K+   +S+   + +  +++  E
Sbjct: 182  KYAKVIDNIKLLRKTKGEELRLLRMQEAQDKENKERADKVDRELSKLIRELQEDRDKCNE 241

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT--- 194
            L+K I+D D +I           K+ +++ T   +     E ++   A L E IE++   
Sbjct: 242  LQKQIEDEDVRIKQKWEQANSFLKIVNELQTKQEK----LEYKKDAIAELRERIEESTES 297

Query: 195  DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
            DE L++  + +E  V +  SD       ++    +   L+  +    A+ T  + E G H
Sbjct: 298  DEYLRDVLSQYEQTVKRMNSD-------RDQKVAQFGTLQTELKTARAKHTAKVEEQGKH 350

Query: 255  MSRMNERD-------STIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE- 306
             S   + D         IQ+   +H +    +    ++    F  RI+  L D +RDLE 
Sbjct: 351  QSDKEKYDRQLVSQRQMIQEAAEKHEIRGY-DGDLDDQEINAFYERIQKMLQDTKRDLER 409

Query: 307  -DKKKSDELALKMAWDSYLDAND----RWKNIEAQKQAKMEIKAGILKHIKEKENERDSF 361
              +  + EL  K A  + L+++     R + I +Q+ A ++               RD  
Sbjct: 410  LQRDNAAELDAKSATITELESHKASRIRDRKISSQRVATLQ---------------RDIT 454

Query: 362  ELQISNLNLSHIDERENKM----------RIEVERKTNQLAEREFEINIRQKQSELFAMD 411
            +LQ   LN   +DE    +          +I+  +  N+++E   +  I +  +E+  ++
Sbjct: 455  KLQ-GELNNLDVDEGAEAVLQTEMEGLESKIKAAKADNRVSE--LDSQITKLNNEVLTLE 511

Query: 412  QKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDR 471
             +   L+RE       + +R +L L+K +L   K++   + + +  ++ DV+ GR     
Sbjct: 512  AQGAQLSRELVECTNLASERAQLELRKKQLTERKRELDILKNTFNQQLTDVV-GRNWTPE 570

Query: 472  DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE 531
             ++ +  +ALR L     +L        +E+  ++ K+    +   K  K+ DS K+ + 
Sbjct: 571  TIESDFQKALRQLSDRLSELRKTKDSTQQELKQVEYKLTTAREQQIKSVKERDSCKKDVL 630

Query: 532  SKLESLNQQ----IFSIDTYQKVLDSAKEKRDVQK---SKYNIADGMRQMFDPFERVARA 584
              L+ + +Q      S+D Y    D+ KE   + K   +   +   +++ F   +  A  
Sbjct: 631  EALKKVPRQNKPVTESVDDYP---DAVKEIEKLLKDTDTDLELNMYLKEYFLKAKVKAEE 687

Query: 585  HHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEE 644
             H C  CE+    E+  + + K R++     +    L  + +    +   L  +R  +E 
Sbjct: 688  KHKCYLCEQSLGDEKTMKRLMK-RIQDKIDDKDRDELLEDQALYGRHLGTLRSVRTKHET 746

Query: 645  YVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
            Y +L KE +P   + ++ LT + ++  +  +D  G     +  + + +VL + V    + 
Sbjct: 747  YGRLCKE-LPSMVEEINSLTLQKERLVRQLEDQDGAFKIAEEKRNAADVLSKSVLKIAQT 805

Query: 705  FQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYME 764
             ++I   ++ +   E    +    VR+ +EI  + +         Q +L K   E++ ++
Sbjct: 806  VKDIADSERHI---ERAQQNSSNQVRSADEINDDQTTCAEQLRIAQAKLSKSTAERQRLK 862

Query: 765  NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL-----DLDEKL----- 814
            +  + +++    L+ +  +A   L   K+ ++ +++  +E+ +L     D+D+++     
Sbjct: 863  DLAAQLEVEKLELKHKITEAVQKLEHKKRLQDTIKNHRDEQSELRKNMQDIDKEVEGIDP 922

Query: 815  -LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQ-AEQKINFQQEIEMLLKIASKIKEYY 872
             +A A   L + +            K  R  E++ AE++      +  L  I  +I++Y 
Sbjct: 923  EIASARAALEESR------------KQGRAREQRIAEERDGIATTVSELKIINREIQDYL 970

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
            D          Q   +  ES + + +    ++ +++++    + N D  RRNI DNL YR
Sbjct: 971  DRGGPANLASNQRTIASLESTIAALEKEMKDVTIQINKLNKEIDNSDAKRRNIADNLTYR 1030

Query: 933  ETKAKVDKFASEIESLEERVLK------IGGVSTFETELGKHLLERDRLLSEVNRCQGTM 986
            +   + D    EIE LE R  +      +    +FE   GK   ER RL+       G+M
Sbjct: 1031 KNLRERDALEEEIEELESRNAQEDYDRLVEEAHSFELYRGKLNAERQRLM-------GSM 1083

Query: 987  SVYQTNISR----NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
            S       R     +I+LK A+      R+ +  I+++TT+ A +DL +   ALD A+M+
Sbjct: 1084 STKDEQFRRLEEEYEIELKGARA-----RYKESHIKVETTKAAIEDLAQGNMALDHAIMQ 1138

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS--DSEGAGT----RSYSYKVLMQTGDA 1096
            +H++KMEEIN+ I +LWQ TY+G DID I+I S  +S  +G     R Y+Y+V M  GD 
Sbjct: 1139 YHSLKMEEINRTIADLWQSTYQGTDIDTIQIRSYMESTASGATNTRRVYNYRVSMIKGDT 1198

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGRCSAGQKVLA +IIRLALAE+F  NCG++ALDEPTTNLD  N  SLA +LH I+
Sbjct: 1199 EMDMRGRCSAGQKVLACIIIRLALAESFGANCGMIALDEPTTNLDSDNIRSLAESLHAII 1258

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + R+ Q NFQLIVITHDE F + +      + + RV +D++Q+S+I  + I
Sbjct: 1259 KARRSQNNFQLIVITHDEEFLKHMQCSDFCDSFLRVKRDENQNSVITRESI 1309


>gi|346972249|gb|EGY15701.1| DNA repair protein rad50 [Verticillium dahliae VdLs.17]
          Length = 1292

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 346/1262 (27%), Positives = 593/1262 (46%), Gaps = 142/1262 (11%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K +E  L T N   GE+  LS R A MD  VPAL+GVS AIL+ VIF HQDE+ WP+ +P
Sbjct: 111  KTLEGSLATNN--NGERSVLSTRVAQMDEAVPALLGVSTAILDYVIFCHQDESLWPMSEP 168

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
              LKK+FD IF A R          +H+   Q     +         +  + +L+  I  
Sbjct: 169  GALKKQFDQIFEAMR----------VHESHRQPQARTRSTRRKATAPEKRSMELQAEIEG 218

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             +E    + ++M EL   I+    + +     + DL+  ++Q           F  +Q  
Sbjct: 219  SREACNGMNDEMAELSAQIKQKRLEANKFLNIVNDLKYKKEQ-----------FTFRQGA 267

Query: 184  YAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAE 243
             + L   +E+ +E+ +  + N     ++ E  +++ + E+    ++   L+ ++     +
Sbjct: 268  VSDLQTTLEELEEDDETLQTNL----SQYEERMARFQTEERQNRSQYTQLQNDLGRSRND 323

Query: 244  ITNLLSEAGAHMS-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRS 296
            ++  LSE G H S       ++  R   I +    H      +    +    +F +RI+ 
Sbjct: 324  LSAKLSEKGKHQSDKDKYERQLASRVDLIHEAAELHGFRGF-DGDLKDTQIKSFNDRIQK 382

Query: 297  RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKEN 356
             L+D +RDLE  +K +   L  A     D   R   +   +    +    I K     +N
Sbjct: 383  LLADKKRDLERIQKENAQELDKATGIITDLEGRKSTMTQNRVFAKQRMGAIEKRTAVIQN 442

Query: 357  ERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKA 416
            + ++  L +     + +D +   +   + + T  +    F+  I Q+  +L+ ++ +   
Sbjct: 443  DINT--LDVDEGAKAILDSQFEDIEGRLAKTTESIDSAGFDGQIEQENEKLYQLESENDK 500

Query: 417  LNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKE 476
            L RE       + +R +L  +K EL + K+K + +   +K+K          LD  +  E
Sbjct: 501  LGRELMEATRLASERAQLEYRKKELVDRKRKLETLTSTWKEK----------LDAQIGSE 550

Query: 477  -----ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK---- 527
                 I    +++L +   L +++R+        Q KI    D   K  +D   KK    
Sbjct: 551  WQAETIEPQFQSVLKKQSQLVAQARQKRDTAREKQQKI----DFSLKSARDAQQKKSDEI 606

Query: 528  -RFIESKLESLNQ--QIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARA 584
             R  +  L+ L Q     +ID Y + +   +E  +   +  ++ + +   +   +     
Sbjct: 607  SRCHDRVLDVLKQVRDEATIDDYAEEVKLLEEDVEAYSTDISLLEALSDYYKQCQETLTK 666

Query: 585  HHVCPCCERPFSAEEEDEFVKKQR-----VKAASSAEHMKVL-SLESSNADSYFQQLDKL 638
             + C  C+R F   ++ + V K R     +K    ++  K    LE S A      LDKL
Sbjct: 667  KNKCKLCDRGF---DDKQSVNKSRFSDKLIKYLDPSKKEKASEDLEKSKA-----TLDKL 718

Query: 639  RMV---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
            R V   +E Y +   E +P  ++    L  EL+   +  ++    +   +A +  VE L 
Sbjct: 719  RQVRVQHETYERSLGE-LPGLKEACKTLEAELETHERQLEEHDENVNAEEAKQADVEALN 777

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL-----STKDNL- 749
            + V    +  ++++  + QV+ +     S G   RT + I  EL  +      STK  L 
Sbjct: 778  KTVMNISQTLKDMKDSEAQVERI-MSQQSSGMATRTADAIH-ELQATCKEQMRSTKARLT 835

Query: 750  ---------QNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEH 800
                     +++L  L  E+  ++N LS +Q +     E K    N ++ +K+ +     
Sbjct: 836  KITTDRQRMRDQLNSLELERSELKNKLSKVQSQL----ERKKDFQNQIQALKEDQANQRE 891

Query: 801  LMEEKGQ-LDLDEKLLAEASG------PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN 853
            L+++  Q L++ E  +AEA           + KEK + +  DL                N
Sbjct: 892  LIQKADQDLEVIEPSIAEARAVRDDTLQRGRAKEKAIVEERDLVA--------------N 937

Query: 854  FQQEIEMLLKIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILV 906
               E++M   + S I++Y D      L  ++R    L++  + +E E+    +RT+++  
Sbjct: 938  SVTELKM---VESDIQDYMDRGGPSNLAANQRAIDGLEKTIAATEQEISDLTVRTNKLKQ 994

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            ++D       N D+ ++NI +NL +R+ K ++D   +EI+ L+              E  
Sbjct: 995  DID-------NGDRKKQNISNNLKFRQNKRQLDVLRAEIDDLQS-CDADDDYDRLNDEAV 1046

Query: 967  KHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN 1026
            +     + L++E     G M      ++R    + +  Y+D  K++ +  I+++TT+ A 
Sbjct: 1047 QLENRHNMLVAERGSLMGQMKTKDEELARLLGRVGKWDYRDASKKYRESHIKVETTKAAI 1106

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSY 1085
            +DL RY  ALDKA+M++H +KMEE+N+I  ELWQ TY+G DID I I SD+EGA G RSY
Sbjct: 1107 EDLGRYGAALDKAIMQYHGLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNEGATGRRSY 1166

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N 
Sbjct: 1167 NYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNI 1226

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
            +SLA +LH I++ R+ Q NFQLIVITHDE F + +   +  + ++RV +DD Q S+I  +
Sbjct: 1227 KSLAESLHHIIKSRQAQSNFQLIVITHDEEFLRHMRCSEFCDSFFRVKRDDKQCSVISRE 1286

Query: 1206 EI 1207
             I
Sbjct: 1287 SI 1288


>gi|116182584|ref|XP_001221141.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51]
 gi|88186217|gb|EAQ93685.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51]
          Length = 1282

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 324/1236 (26%), Positives = 582/1236 (47%), Gaps = 132/1236 (10%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S R  ++D+ VP  +GVS A+L+ VIF HQDE+ WP+ +P+ LKK+FD+IF 
Sbjct: 120  NNGERHVISTRVMELDKLVPEKLGVSPAVLDTVIFCHQDESLWPMSEPAALKKRFDEIFE 179

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQM 135
            A +YTK ++ +K L K + +E++  KL+    +  K+ A K+ + + Q   + E  +++ 
Sbjct: 180  AMKYTKVIDNLKILRKKKGEELRELKLQESQDKANKERADKVNKLMGQLTREIEEGRDKY 239

Query: 136  QELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTD 195
             EL + + +   KI           ++ + + T T +     E  Q+  + + EE  DTD
Sbjct: 240  DELTEQMAEEGTKIKSKHEQANSFLRIVNDLQTKTEKLEYKKEAVQELRSRI-EESADTD 298

Query: 196  EELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHM 255
            + LKN  + +E  + +  +D       ++   T+   L+ ++ +   + T   SE G H 
Sbjct: 299  QVLKNALDEYEQTIERTVAD-------RDRKATQFHELQGDLKSSREQHTAKASEQGKHQ 351

Query: 256  S-------RMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLE-- 306
            S       ++  +D  I     RH +    +    +     F  R++  L+D +R+LE  
Sbjct: 352  SDKDKYERQLVTQDRMIHDAATRHEIRGY-DGDLDDRKIAAFNERMQKTLNDKKRELERI 410

Query: 307  DKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQIS 366
             +  ++EL  K A        +R    E++K + +  +A   + I     E  + + ++S
Sbjct: 411  QRDNAEELDKKSAV-----ITER----ESRKASLIRDRASAKQRIVTVGKESAAIQSELS 461

Query: 367  NLNLSHIDE-------RENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
             L++    E       +E + RIE  +   Q A+   +  I++   +++ ++ +   L R
Sbjct: 462  KLDIDEGAEAMLRTEMKELEARIETGKAEEQAAD--LDAQIKKVNDDIWNLEAQTAKLAR 519

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            E       + +R +L L+K +L   +++ + +   + +++   L G       ++ E   
Sbjct: 520  ELVECTRLASERAQLDLRKKQLAERRRELEILKKTWTEQL-SALVGNDWQPETIETEFQD 578

Query: 480  ALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESL-N 538
            A++   T   +   +     +E+  ++ ++    D  +K   + ++ KR +   L+ L N
Sbjct: 579  AVKRQNTIVTECRKQKDATQQELKQVEYRLSNARDRHNKLSTERENCKRAVTKALQDLRN 638

Query: 539  QQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAE 598
                 ++ Y K L+S             I   + Q     +R        P   R F   
Sbjct: 639  PDSPPVEDYTKELES-------------IETELSQTETDLKRTK------PPRGRNFL-- 677

Query: 599  EEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEK 658
              D+F KK       S E  + L  +  +     + L  +R  Y+ Y +L  E +P+  K
Sbjct: 678  --DKFAKKL------SDEDKQELMEDPVHFTEQIKTLKAVRSKYDSYRRLEAE-LPLITK 728

Query: 659  NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDL 718
            ++   + + ++  +  +D      + +  ++ V+ L + V    +  ++I   ++QV   
Sbjct: 729  DIDSASSQREELVRRLEDQDLAFREAEDKRQEVDGLSKHVLKISQTHKDIIEAERQV--- 785

Query: 719  EYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLR 778
            E    S    +R+ +EI  E +         Q +L KL  E++ +++  + +++    LR
Sbjct: 786  ERSQQSSSIAMRSPDEINEEQTACAEQTRTAQAKLSKLTTERQRLKDLAAQLEVEKLELR 845

Query: 779  EEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKV 838
             +   A   L   K  ++ +    EE+G L    + + EA     KE E+L  +    + 
Sbjct: 846  HKISSAVQQLERKKSLQDSIRRYKEEQGHL---RETIHEAD----KEVERLEPEIASARA 898

Query: 839  KL------NREYEEQ-AEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSE 891
             L       R  E++ AE++ +       L  +++ I+EY D          Q   +  E
Sbjct: 899  ALEEARQQGRAKEQKVAEERDSIATTFSELRMVSTDIQEYLDRGGPSNLASNQRAIATLE 958

Query: 892  SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRE------------------ 933
            + + + +    ++ V++++    + N D  +RNI DNL YR+                  
Sbjct: 959  ATITNLESEMKDLTVQINKLNKEIDNSDAKKRNIADNLTYRKNLRECEALEEEIIELESR 1018

Query: 934  -TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN 992
              +   D+   E   LE R                    R +L ++  R  GT++     
Sbjct: 1019 NAQEDYDRLTQEARYLETR--------------------RSKLTADRERLVGTLTTKDEE 1058

Query: 993  ISRNKIDLK-QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEI 1051
              R  +D + Q + KD   ++ +  I+++TT+ A  DL     ALD A+MR+H++KMEEI
Sbjct: 1059 FKR--LDEEYQIELKDAKAKYKESHIKVETTKAAIDDLGHGTAALDHAIMRYHSLKMEEI 1116

Query: 1052 NKIIRELWQQTYRGQDIDYIRIHSDSE-----GAGTRSYSYKVLMQTGDAELEMRGRCSA 1106
            N+ I ELWQ TY+G DID I+I SD E     G G R+Y+Y+V M  GD E++MRGRCSA
Sbjct: 1117 NRTIGELWQSTYQGTDIDTIQIRSDVEAGAASGGGKRNYNYRVSMVKGDTEMDMRGRCSA 1176

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQ 1166
            GQKVLA +IIRLALAE+F +NCG++ALDEPTTNLD  N  SLA +LH I++ R+ Q N Q
Sbjct: 1177 GQKVLACIIIRLALAESFGVNCGLIALDEPTTNLDSDNIRSLAESLHGIIKARRSQSNLQ 1236

Query: 1167 LIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            LIVITHDE F + +      + ++RV +D+ Q+S+I
Sbjct: 1237 LIVITHDEEFLKHMQCSDFCDDFFRVRRDEKQNSVI 1272


>gi|156040445|ref|XP_001587209.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980]
 gi|154696295|gb|EDN96033.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1336

 Score =  315 bits (808), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 342/1281 (26%), Positives = 598/1281 (46%), Gaps = 189/1281 (14%)

Query: 16   HTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFS 75
            + GE+  +S++  ++D+ + + +GVS+A+L+NVIF HQD++ WP+ +PS LKKKFDDIF 
Sbjct: 141  NGGERTAVSHKVGEIDKIMQSALGVSEAVLDNVIFCHQDDSLWPMSEPSHLKKKFDDIFE 200

Query: 76   ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQD-QEKTEALKNQ 134
            AT+YTKA++ +K L KD AQ+IK                    E+I++D ++K E  K++
Sbjct: 201  ATKYTKAVDSLKSLKKDYAQQIK---------------GMIAEEAIAKDNKDKGEKTKSR 245

Query: 135  MQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
             +EL   I  +      +E  LKD   M+     + A+     ++Q  ++  L +++   
Sbjct: 246  CEELASQIDQL------SEEALKDKANMEAVREVVDAK-----QRQAAEFWELVQKLRTN 294

Query: 195  DEELKNWKNNFEGIVAK----RESD-------------ISKLEREKNDMDTKIKFLEQNI 237
             E +K  + N E +  +     ESD             I ++E++   +  + +  +Q +
Sbjct: 295  KERVKFSEENLESLQKRIKPLSESDEWLKSTLDQYADRILEMEQQDEQLQNQYRDQQQKM 354

Query: 238  DAYTAEITNLLSEAG-------AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN- 289
             A  +E+    +E G       A+   +  R   ++   ++H++    +    NE+ +N 
Sbjct: 355  SANASELGKKQAELGRQQALKQAYEEELESRVQLVKSSASKHSIRGYDDDI--NESRVNE 412

Query: 290  FINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNI-----EAQKQAKMEIK 344
            F+ RI+    D ERDLE  K +               ND  K++     E Q Q  + ++
Sbjct: 413  FMERIKKLSRDKERDLERVKAA--------------TNDELKSVQTTLTELQNQHAIRVQ 458

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDERE--------NKMRIEVERKTNQLAEREF 396
              +        N+R     + + L     DE +        N+ +  +E+   Q     +
Sbjct: 459  EKVTAKQTISNNDR-KMGPKKTELGFIQFDEGDKTGLESSYNETKDLLEKIRAQFERAGW 517

Query: 397  EINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYK 456
            E  I      L   + + K+L +E   +   S DR +L     EL+  K K   +   + 
Sbjct: 518  EHRINASNGRLREFEDEEKSLRKEAFEINKRSNDRAQLDYVIGELKKTKGKLDTMKATHG 577

Query: 457  DKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL 516
             K+  +L     +D  L K+   AL     E  D +++   A K  +    +   V D+L
Sbjct: 578  SKLDSILGPDWQVDT-LGKDFQHALDREKDEVADATNEQEAAKKSYSEAGFRFNAVRDDL 636

Query: 517  SKHRKDVDS-KKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMF 575
               +  + S +   + S  +   + + SI+ Y + L+  +E+RD  + + NI DG +   
Sbjct: 637  KAKKDQLKSCENAVLTSVRDEDGRPLVSIEEYPRELNQLEEERD--EIRDNI-DGFKHKI 693

Query: 576  DPFERV---ARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYF 632
            D F +     +   +C  CER F  E               SA   K+  L + +A    
Sbjct: 694  DYFTQCLNTIQTKDMCKLCERAFVEE------------GHRSAAMKKIQKLLNKDARETL 741

Query: 633  Q-QLDKLRMVYEEYVKLSKET-------------IPVAEKNLHELTEELDQKSQAFDDVL 678
            Q QL+    ++ E +K++K               IP  E++L +  EE  +  +  +   
Sbjct: 742  QGQLE----IHNEQIKVAKAAQSQYDIYQSLKDEIPRIEQDLKKADEEKQRLLEEVEHHD 797

Query: 679  GVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRT------- 731
             ++ +  A +  VE L   + +  R   +I   + ++D L    +  G  +         
Sbjct: 798  SIVERKNARQRDVESLTNIISSIIRYNSDITDHEAKIDSLSSQQNIAGSIITADEIQERQ 857

Query: 732  ------MEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
                  M E++ +L+  LS KD  ++   K+ D    ME DLS              + +
Sbjct: 858  TACSENMREVREQLTKVLSEKDAAKD---KIND----MERDLS--------------RKS 896

Query: 786  NTLRDV------KKA-EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKL---LSDYND 835
              LRDV      K+A ++E++ L++   Q     + +  A   L   K K+    + Y D
Sbjct: 897  QRLRDVIHGLAKKEALQKEIDELLDSNSQ---QREAINRADTELETLKPKIDTAKAKYED 953

Query: 836  LKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVK 895
            ++ + + +  E   QK      +   ++    I  Y D    E+    Q    ++ + ++
Sbjct: 954  IQQQGHAKEREVRSQKEKLADTVRQFMQHEKNINGYIDSNGPEKLSACQ----RAINSIQ 1009

Query: 896  SCKIRTDEIL----VELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER 951
              + R +EI+     EL+  +    + D+++ NI DN+ YR+  AK++ +  +   LE +
Sbjct: 1010 QDQERIEEIMARITTELNALRAKKSDSDRLKTNISDNILYRQELAKLEVYKKQTIELEAQ 1069

Query: 952  VLKIGGVSTFETELGK---HLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDI 1008
             ++ G   T   E  K      +  RL  +       ++    N+++  ++     YK+ 
Sbjct: 1070 NVE-GNFETLTKEAEKIEAKFYDHRRLYQQKT---AVLAEKDQNLAQYLLEW-DLNYKNA 1124

Query: 1009 DKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1068
               +   +I++KTT+ A  DL +   A+DKA+++FH++KMEEIN+I  ELWQ TY+G D+
Sbjct: 1125 RTEYRTAMIKVKTTKAAIDDLGKMITAMDKAIVKFHSVKMEEINRIAGELWQTTYQGTDV 1184

Query: 1069 DYIRIHSDSE----GAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAE 1122
            D I I S+ +     AG +  +Y Y+V+M   D E++MRGRCSAGQKVLA +IIRLALAE
Sbjct: 1185 DTIMIRSEKDEGETAAGNKKTNYKYRVVMVKQDVEMDMRGRCSAGQKVLACIIIRLALAE 1244

Query: 1123 TFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQ 1182
             F +NCG++ALDEPTTNLD  N  +LA +LH I++ R+ Q NFQLI+ITHDE F +++  
Sbjct: 1245 CFGINCGLIALDEPTTNLDQDNIRALAESLHGIIKSRQQQANFQLIIITHDEEFLKVMQC 1304

Query: 1183 RQHAEKYYRVAKDDHQHSIIE 1203
                + +Y+V++D  Q+S IE
Sbjct: 1305 SDFCDDFYQVSRDQEQNSKIE 1325


>gi|409047440|gb|EKM56919.1| hypothetical protein PHACADRAFT_208087 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1303

 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 338/1248 (27%), Positives = 588/1248 (47%), Gaps = 169/1248 (13%)

Query: 3    YKAIESVLQTINPH-TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            + ++E +L T     TG++  +S RCA+M+ E+P L GVS+A+L+NVIF HQ+++ WPL 
Sbjct: 112  FTSLEGILSTKGAEGTGKRATISTRCAEMNVEIPQLFGVSQAVLDNVIFCHQEDSCWPLA 171

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            + S LKKKFD IF AT+YTKAL+ I+ L   +AQE++  K +L++L+  K  +  L+   
Sbjct: 172  ESSVLKKKFDGIFEATKYTKALDAIRSLRDKKAQELRIEKEQLDSLRLEKTRSDGLKARF 231

Query: 122  SQDQEKTEALKNQMQELEK-------SIQDIDDKIHHTELTLKDLRKMQDQISTMTARRS 174
            S+      A  ++ +E EK       S Q+  +    +       R++  ++  +TA + 
Sbjct: 232  SELTRSIAAKSHEYKEAEKKHALKVASNQEFCESFTKS-------REICVKVDGLTATKR 284

Query: 175  TLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIV-------AKRESDI----SKLEREK 223
              +E++        +E+  +D EL++  N+F+  V       A R  DI    S+L+R +
Sbjct: 285  R-YEEELGNLKGSLQELAGSDRELQDRLNSFKAHVFEQERKRAARLDDIQNLKSELDRTR 343

Query: 224  NDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFS 283
               D K+            E   L+++A AH   + +R+  I+ L A++++    + P  
Sbjct: 344  TIRDGKLN-----------EHGELVAQAKAHDIVLEKREQLIKDLAAKYSMRGFESTPLD 392

Query: 284  NEAALNFINRI---RSRLSDLERDLEDKKK--SDE-----LALKMAWDSYL----DANDR 329
             E  L+FI RI   + RL     D + K+K  S E       L+   +SY     D  DR
Sbjct: 393  EERILDFIMRIEDTQRRLHTESADFQSKQKCLSAEYNTRFTQLRSERESYRGRKKDPQDR 452

Query: 330  WKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSH---------IDERENKM 380
             + +  Q  AK+   + +       EN     +++ +  ++ H          DER NK 
Sbjct: 453  SEILRKQISAKLRDFSDL--ESATSENATVEADIEKAQHSIDHAKEIIREAKFDERMNKK 510

Query: 381  RIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAE 440
              E E +       + E+    KQS     +Q      RE+       + R +  LKKA 
Sbjct: 511  TAEREERAAHHGTLQAELASVVKQSS----EQGELKFKREQ-------QQRKEFELKKA- 558

Query: 441  LENHKKKHKKIIDEYKDKIRDVLK---GRLPLDRDLK--------KEITQALRALLTEFD 489
            LE      ++ I    D +   ++    R+ +++D K        +  +Q ++ + T   
Sbjct: 559  LEASNPLFQRFIG--SDAVPGTMERELSRVSIEKDAKLSTLIDAARAASQDVQTIDTALM 616

Query: 490  DLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQK 549
             L ++ +E  +E+  L M+I++  D +                        + +I    K
Sbjct: 617  SLRAQIKEKSEEIAGLDMQIKDDMDAVV----------------------SLLNIPDPYK 654

Query: 550  VLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRV 609
             L  A++     +++   A G        ++       CP C+R  + +E   F +K   
Sbjct: 655  ALSEAEKATASARNEIASAKGGGPKLQELKKSGNERKCCPLCDRNMNNQELRVFERKIDE 714

Query: 610  KAA-SSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELD 668
            + A SS E+++ L  E +  +  ++QL           +L    IP  E+ + E   EL 
Sbjct: 715  EVAKSSQENIQDLERELTEWEHVWKQLQSASQKATTRDRLKNTDIPALERQIKEKEGELS 774

Query: 669  QKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQG 728
                  ++    +     +   +  L +   +   + +E+   +  VD LE  L + G  
Sbjct: 775  GARIVGEEATQRVNDAAKEMNELNELKRSATSISEIQRELATLRLDVDRLETTLLASG-S 833

Query: 729  VRTMEEIQ-------LELSG------SLSTKDNLQN--------ELEKLRDEQRYMENDL 767
             +T+EE+Q       +++ G      S + +  LQ+        EL +L  +Q  ++  L
Sbjct: 834  TKTVEEVQAQAELLKVKIDGIDQELRSFAAEKELQSSALTERKEELHELEKKQANLKGKL 893

Query: 768  ---SNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSK 824
               ++++ R  +++E+   AANT+R++     +L+ ++E   QL+ + +    A   LS+
Sbjct: 894  REKTSLEDRIKSMKEDVESAANTIRELDAKVSDLDPVIE---QLEQEHQA---ADQKLSE 947

Query: 825  EKEKLLSDYNDLKVKLNR--EYEEQAEQKINFQQEIEMLLK-IASKIKEYYDLRKDERFK 881
            +     S   D+   +N   +     EQ +  Q E    LK  +++I+E      D +  
Sbjct: 948  KLALARSAAQDVDSSINTLDDLTHTIEQYV--QDECARHLKECSTEIREL-----DSQIA 1000

Query: 882  ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKF 941
            EL+ K+++++ E  S     +E    L               N+ +NL  R+    +   
Sbjct: 1001 ELERKQAEADEEASSILKGINESTAALP--------------NLHNNLRARQLVNDIANM 1046

Query: 942  ASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLK 1001
             +EI   + +   +  +  F+ +      E   L + V    G ++     +   +I L 
Sbjct: 1047 QAEINKYDMKE-AVQAMHLFDEKYPSEKDEETGLQNTVAYLDGVIATNNQELESLQIKL- 1104

Query: 1002 QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQ 1061
            Q  Y DI++R+ D+LI++K + MAN DL++Y  ALD A+M++H++KMEE+N  +R LW +
Sbjct: 1105 QENYNDINRRYRDKLIKVKLSGMANNDLEKYAKALDSAIMKYHSLKMEEVNDTMRHLWNK 1164

Query: 1062 TYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            TY+G DID I+I SDS+  G  RS+ Y+V+M    A ++MRGRCSAGQK+LAS+IIRLAL
Sbjct: 1165 TYQGTDIDGIKICSDSDTTGKRRSHQYRVVMTKDQAGMDMRGRCSAGQKMLASIIIRLAL 1224

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            A++F  NCGILALDEPT  LD  N  +LA++L  I+ +RK   NFQLI
Sbjct: 1225 ADSFGQNCGILALDEPTNALDTENIAALASSLADIINERKHHANFQLI 1272


>gi|66801073|ref|XP_629462.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
 gi|74996470|sp|Q54CS9.1|RAD50_DICDI RecName: Full=DNA repair protein RAD50; AltName: Full=DNA
            recombination/repair protein
 gi|60462868|gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
          Length = 1351

 Score =  312 bits (800), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 217/637 (34%), Positives = 355/637 (55%), Gaps = 37/637 (5%)

Query: 588  CPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK 647
            C  C+   +  E   FV             +K L +E SN+    ++ +KL  +  +  +
Sbjct: 732  CSLCKNEMNGNELTSFVHTLETHCNDIPNQLKQLKIEISNSKIQLEKFNKLLPIIVKREE 791

Query: 648  LSKETIPV---AEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV----ET 700
            L +++IP    ++KNL      L+Q+ ++ + VL    QI++  ES  VL Q V    + 
Sbjct: 792  LIEKSIPELKESQKNL------LEQQLKSNEMVLEKQNQIES-LESQSVLYQQVTLVFQY 844

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQ 760
             D+  Q IQ  + ++   E  +  +   +RT+EE+  +L          Q +L+ +  E 
Sbjct: 845  IDQTKQSIQSIESEIQKEEKEIMKQSSDLRTIEEVDKDLEIQ-------QEQLKTIEKEI 897

Query: 761  RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKG-------QLDLDEK 813
                N   N QI       + +   N L  +K A   ++HL + K        QL L+ +
Sbjct: 898  SNFTNKQKNDQIGIFEKERQLISIKNQLTTIKSASGIIDHLRDTKKELQSNNQQLQLEIE 957

Query: 814  LLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD 873
             L ++    + + ++L +++  L+++  ++ +  +++K  F   ++ +  + SKI +  +
Sbjct: 958  NLQQSIDQSNNDAKQLENEFQQLEIEFEKKIDAYSKEKNTFSVRLDSINSLQSKILDPSE 1017

Query: 874  LRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRN---QDQIRRNIEDNLN 930
            L K  +  E+QEK  + ES + +    + + L+       I +N   +D  +R I DN++
Sbjct: 1018 LCK--QLNEIQEKNQELESNLSTL---SQDYLIGQQHISTIQQNLSSKDITKRAISDNIS 1072

Query: 931  YRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQ 990
            +R+ K  V++   +I S +  ++K    S  E +  K   E + L S+ ++  G  +V Q
Sbjct: 1073 FRQHKNNVEQIIRQI-SRKNELIKEMMQSQLEIDSNKLEQEINSLKSKFDQITGQTAVLQ 1131

Query: 991  TNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
            + I+ N+ +L +  YK+ID  + D LI+L+TTE   KDLD+YY ALDK+LM++HT+KM+E
Sbjct: 1132 SQINSNRQELSKPTYKNIDDVNKDLLIKLQTTETVGKDLDKYYKALDKSLMKYHTLKMDE 1191

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKV 1110
            IN+ I+E+WQ TY+G DID I I S+  G   ++ +Y+V+M  GD EL+MRGRCSAGQKV
Sbjct: 1192 INRSIKEIWQTTYKGSDIDTIEIRSEESGTANKTINYRVVMIKGDVELDMRGRCSAGQKV 1251

Query: 1111 LASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVI 1170
            LA L+IRLALAE FC NCGILALDEPT++LD  N ES A +L  I+E RK Q+ FQLI+I
Sbjct: 1252 LACLVIRLALAENFCSNCGILALDEPTSHLDRANIESFANSLLNIIESRKSQKGFQLIII 1311

Query: 1171 THDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            THDE F Q + +  + + Y+RV K+ +QHS +E +EI
Sbjct: 1312 THDEEFVQYLSRGNYCDYYWRVTKNANQHSHLERKEI 1348


>gi|384248477|gb|EIE21961.1| P-loop containing nucleoside triphosphate hydrolase protein
            [Coccomyxa subellipsoidea C-169]
          Length = 1431

 Score =  312 bits (799), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 218/613 (35%), Positives = 323/613 (52%), Gaps = 61/613 (9%)

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQ 683
            E ++  +  Q L +L+        LS+  IP     L EL    +  +   +      A+
Sbjct: 846  ELADVGARLQALRELQPTSVRCQALSQGDIPQLRHRLQELEATAEHGADTLEHASADSAE 905

Query: 684  IK-ADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRT-------MEEI 735
             + A +E+ ++  + V   DRL  E+   Q+ V  L     S G   RT       ME +
Sbjct: 906  AQHAFQEAQKLHAEVVWQIDRLAVELAEAQRDVAQLTAQARSSG-FARTVGDVDTDMEAL 964

Query: 736  QLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAE 795
            + + +     KD    +LE+LR       N++++    WH +REE       +R V  AE
Sbjct: 965  ENQRTALEREKDTAMRKLERLR-------NEVNSATHEWHQVREE------AMRKVAAAE 1011

Query: 796  EELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQ 855
                     + QLD   K L        ++ E+L      L+ +  +  +E+ EQ+   +
Sbjct: 1012 R--------RAQLDAQVKDLETQIAAAGRQIEELRRQMQPLEAERAQRTKERGEQRTAAR 1063

Query: 856  QEI---------------EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIR 900
                              E+  K+   ++EY    K+E+ K        S+  +++   R
Sbjct: 1064 AREAEAEGRLREANAAASELRAKL-RPVEEYASSDKEEQLKRAGAGMEASKQRMEANAER 1122

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNY-------RETKAKVDKFASEIESLEERVL 953
               I  E+ R +  V+  D ++R +++ + Y       +E +A+  K  +++ +L     
Sbjct: 1123 VKAISEEIGRLQADVKGHDDLKRQLDECMAYQKNLIIEKELQARHAKVTADMGNL----- 1177

Query: 954  KIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHF 1013
              G     + E  +   ++     + +  +G++   +  + R + +L   +Y+DID RH 
Sbjct: 1178 --GDHEKIKDEHDQLEAKKKEFCRDQDMARGSLGTVREGLKRARENLSAKEYRDIDNRHR 1235

Query: 1014 DQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI 1073
             QLI+LKTTEMA  DLD+Y+ AL+KAL+ FHT KM +INKI++ELWQ+TYR QDIDYI+I
Sbjct: 1236 KQLIELKTTEMAASDLDKYHKALEKALLAFHTAKMADINKIVKELWQKTYRNQDIDYIQI 1295

Query: 1074 HSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 1133
             +D++    RSY+Y+V M  G AEL+MRGRCSAGQKVLA LIIRLALAETFCLNCGILAL
Sbjct: 1296 AADADHGAARSYNYRVTMVAGGAELDMRGRCSAGQKVLACLIIRLALAETFCLNCGILAL 1355

Query: 1134 DEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVA 1193
            DEPTTNLD  N+ SLA AL +IM  R  Q NFQL+VITHDERFA +IG R+H E  +R+ 
Sbjct: 1356 DEPTTNLDEANSASLADALRQIMAQRAAQANFQLVVITHDERFANMIGTREHTEFMWRIT 1415

Query: 1194 KDDHQHSIIEAQE 1206
            KD  QHS I AQE
Sbjct: 1416 KDQDQHSHI-AQE 1427


>gi|347970376|ref|XP_313457.4| AGAP003676-PA [Anopheles gambiae str. PEST]
 gi|333468904|gb|EAA08790.4| AGAP003676-PA [Anopheles gambiae str. PEST]
          Length = 1308

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 330/1268 (26%), Positives = 607/1268 (47%), Gaps = 134/1268 (10%)

Query: 3    YKAIESVLQTINPHTGEKVCLS-YRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            ++ ++S +   N  T EKV ++  R  D++ E+   MGVSKAIL NVIF HQ+++ WPL+
Sbjct: 112  FETMDSTITMENAQTKEKVTMTRSRVTDINNEMCDAMGVSKAILNNVIFCHQEDSCWPLE 171

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +P  LKKKFD IF  T Y + ++ + K+ K+  +++K  +  L+ LQ +K A  + ++  
Sbjct: 172  EPKELKKKFDAIFGTTEYNRVIDKLIKISKEYNEKLKEKQGDLKLLQNVK-AQAETKQLQ 230

Query: 122  SQDQEKTEALKNQM-QELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
             +D E+  A   QM  ELE+ I+ I  K+    L  +    +  +     ++  +  EQ 
Sbjct: 231  LEDGERNMARLTQMIGELEEDIRPIQSKLEQLALVERQYSSLLAKKIEFNSKIKSKHEQS 290

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLE---QNI 237
            Q+  + + +  E +  EL+     F+   A + S++   E E   +  + + L+   Q+I
Sbjct: 291  QQLRSKINKLFEGSLPELEMEVRIFQQTSASKRSELEDEEAELQRLKLQDRSLQSKLQSI 350

Query: 238  DAYTAEITN-------LLSEAGAHMSRMNERDS----------TIQKLFARHNLGSLPNA 280
            D    E+         L  E G  +  + ++ S          ++        LGS+ NA
Sbjct: 351  DGQKIELAEKQKRERELQIERGKKIRALGDKLSLSLSDDYGAASVNASLVEAALGSIRNA 410

Query: 281  PFSNEAALNF---------------INRIRSRLSDLERDLEDKKKSDELALKMAWDSYLD 325
              + EA +                 I+++R   + LE D   K+K             ++
Sbjct: 411  LKAQEATVQSKGKAFEEEDAQAQKRIDKLRETKATLESDCTSKRKQ------------IE 458

Query: 326  ANDRWKNIEAQKQAKMEIKAGILKH-IKEKENERDSFELQISNLNLSHIDERENKMRIEV 384
              DR K   A++ A++E  A  LK  I E +     +E Q++  +L              
Sbjct: 459  QLDREKLQTAREVAEIERSAETLKRLIDEIDRLEQEYETQVTAADLPA------------ 506

Query: 385  ERKTNQLAEREFEINIR-QKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELEN 443
              K  +LAER+    +R Q Q +L  +D++I +L    D +A   ++   L LK+ +   
Sbjct: 507  --KRKELAERKL---LRDQLQDQLDKLDERISSL----DAVAMKEQE---LTLKEQQCTG 554

Query: 444  HKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN 503
             + + +++ +++ D +R     RL  DR ++      L+ L   +D+L  + +  +++V 
Sbjct: 555  REAELRRLRNKHGDSLR-----RLFPDRTIESNYKSNLQNL---YDELQKEVKTVNEKVR 606

Query: 504  MLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDV 560
              Q  + E+       ++ +D     +E +L    ++I+S    + Y++VL    EK   
Sbjct: 607  RTQATVTEMETTRKSQKQQLDR----LERELADAEEKIYSACRGNAYEEVLAKLNEKIQK 662

Query: 561  QKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKV 620
               ++  A     ++  F         CP CE+   +E+  E   K   +     E ++ 
Sbjct: 663  NNMEHGEARSAVVLYQKFIANIDNDRCCPVCEKGLESEDAHEVSGKLGDEIRRLPEKIET 722

Query: 621  L--SLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVL 678
            L  +L+   AD  + +L  L+ + E   K  KE +P  ++ L +  + L   S   ++  
Sbjct: 723  LERTLKKDRAD--YDKLLALKPISERLEKQRKE-LPQLKQQLQDTEKRLSTASDELEEYQ 779

Query: 679  GVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSR-GQGVRTMEEIQL 737
              +++  A+ + +  +V  +   D+L  E++  ++ V++L   L     +GV T+E ++ 
Sbjct: 780  LAVSEPTANMQLINAIVGDMSVLDKLGSELERMKRGVEELRAQLGPNMAEGV-TIESLKS 838

Query: 738  E---LSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA 794
            E   L     T+ N  +EL+   D +      L+N+Q R + ++ +K+K   +++ +++ 
Sbjct: 839  EREALRAKFKTERNRTDELQNTIDTK---TEKLNNLQARNNQMKSKKLKLQESVQSLEQK 895

Query: 795  EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINF 854
               +  L  +   L+ + K       P+ ++ ++ L      K + N+E +   +     
Sbjct: 896  RASVNELGAKIATLEEEFKDAERRLTPVRQQLQQELEQKQRSKEQNNKELQRLRKALEEL 955

Query: 855  QQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDI 914
            + E   +++++ ++ +   L        LQ K+ Q++ E    K   D     +++ +  
Sbjct: 956  RWEETAIVRLSGELDDLAALNLGVELSRLQAKREQTQQEQDQLKRTMDGKAKSIEKLRQD 1015

Query: 915  VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDR 974
            + NQ    R++ DN + +    +     +E+ +L   V  +G     E E+     ERDR
Sbjct: 1016 IANQHLQERDLLDNRDLKRLMRETADLEAELAAL---VKSMG-----EMEVCSVQKERDR 1067

Query: 975  LL----------SEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            L+          SE+N   G +   Q  ++  + +L ++++++  + +   L +      
Sbjct: 1068 LIDLRDELQARRSEMN---GKVGELQRQLNELRKELNRSEFRNAVRNYVTTLTESIVQRK 1124

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRS 1084
               D+ +Y +AL+ AL  +HT KM+EIN+ I  LW+  YRG DIDYIRI++  +G   RS
Sbjct: 1125 IISDIKKYRDALESALREYHTEKMQEINRTIFSLWRDIYRGNDIDYIRINTVDDGVAERS 1184

Query: 1085 -----YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
                 Y+Y V+    D E++MRGRCSAGQKVLASLIIRLALAETF  NCG++ALDEPTTN
Sbjct: 1185 DKRRAYTYGVVQAKNDVEIDMRGRCSAGQKVLASLIIRLALAETFSSNCGVMALDEPTTN 1244

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N +SL  +L RI+ +R+G  +F LIVITHDE F   + + +  E YYR++++    
Sbjct: 1245 LDRDNIDSLCESLRRIVSEREGG-HFLLIVITHDEEF---VTKLEKFENYYRISRNSEGK 1300

Query: 1200 SIIEAQEI 1207
            S+I+ +++
Sbjct: 1301 SVIKEEQL 1308


>gi|241997524|ref|XP_002433411.1| SMC protein, putative [Ixodes scapularis]
 gi|215490834|gb|EEC00475.1| SMC protein, putative [Ixodes scapularis]
          Length = 1258

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 354/1258 (28%), Positives = 589/1258 (46%), Gaps = 221/1258 (17%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            G K   + +C D++  V  L+GV +AILENVIF HQ ++NWPL +  TLK KFD+IF+  
Sbjct: 136  GNKTTATSKCCDINATVVELLGVPRAILENVIFCHQTDSNWPLSEGQTLKTKFDNIFA-- 193

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
                A + IK L           KL+LE  Q +K         +S+  +  +A K +  E
Sbjct: 194  ----ATQYIKALEN-------IRKLRLEYNQGIK--------LLSESTKYLKANKEKADE 234

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
             E+ I              KD RK+ D I T+        E + +      +E+E  ++E
Sbjct: 235  YEEEIA-------------KDERKLADCIGTLQD-----IETKLEPLHLEWKEMEKKEDE 276

Query: 198  LKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSR 257
             +N+               SKL  E++ +D    +    I   T  +      A    SR
Sbjct: 277  ARNFH--------------SKLSSERDQLD----YTRNEIQRITRNLKESEKTAVEETSR 318

Query: 258  MNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI-NRIRSRLSDLERDLEDKKKSDELAL 316
              ER S  + L  + +LG       S E  ++ + + + +R+SDL+ + E  K+  E   
Sbjct: 319  KVERKS--ESLNQKLSLGVTLCREDSLEKKVSLVVSCLDNRVSDLQLNFETTKEKREAHE 376

Query: 317  KMAWDSYLDANDRWKNIEAQKQAK-----------MEIKA------GILKHIKEKENERD 359
            K   DS     +R    E ++++            M I+       G    I+E E E  
Sbjct: 377  KSLQDSIDSVRERKSKSEQKRESTQKQIADNQKKIMVIRKELLQAEGYCSEIRELEAEIG 436

Query: 360  SFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNR 419
             FE Q+++L              E E  ++QL ++     I  KQ     +  K++ LNR
Sbjct: 437  KFEDQLASL--------------ERELPSDQLKDK-----IADKQRSKDEITDKLENLNR 477

Query: 420  EKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQ 479
            E   LA       K + +++ELE+       I  E  +KI+ + + ++  +R   +    
Sbjct: 478  E---LASAQ----KFSKEQSELEH-------IRQELSEKIKSLEQAKVESERKFME---- 519

Query: 480  ALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESL-- 537
                LL  F   S  +++ +++++ L  ++  + D+++K R    S    +E+KL+ L  
Sbjct: 520  ----LLGTFP-ASDYAKQVNEKISSLGSEVSSLRDSVTKLRTTESS----LETKLKMLED 570

Query: 538  ------------NQQIFSIDTYQKVLDSAKEKRDVQKSKY----NIADGMRQMFDPFERV 581
                         +++ S+   +  LD + ++  ++ +K         G   MF  +   
Sbjct: 571  DLKKKEKELDKSRKKVISVCGSEN-LDGSIQQLKLEMTKMRDEKGFITGSAFMFRKYIER 629

Query: 582  ARAHHVCPCCERPFSAEEEDEFV--------KKQRVKAASSAEHMKVLSLESSNADSYFQ 633
             R    CP C+R F   EE E V        KK R+      E +   + E  + +  F 
Sbjct: 630  MRQSPCCPLCKRHF---EELELVNRLIEDLEKKMRI----LPEELNKKTREIDDREHKFN 682

Query: 634  QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES--- 690
             + +L+   E+  KL    +P  +  +   T E D+           L  +KA KE    
Sbjct: 683  DMQRLKGEEEKMSKLKNNELPEVKAKILNATTERDR-----------LTSLKASKEEQLD 731

Query: 691  --------VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLE---L 739
                       L+   ET DRL +E  + ++Q+D     +    QG RTME I  E   L
Sbjct: 732  MKIFDLEMARSLLGEAETMDRLSRERDVLRRQLDSKSPNVQRLKQG-RTMENIMAEIRDL 790

Query: 740  SGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELE 799
            +G          ELE +  + R  ++   ++ +  +  R +K++      + KK EE   
Sbjct: 791  NGQ-------ARELESIMLDYRAKQDQYHSLGMSLNAARSKKLQL-----ESKKKEES-- 836

Query: 800  HLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYN------DLKVKLNREYEEQAEQKIN 853
             L ++K +L+ + + L  +  PL KEKE+L           +  V   R   E    +++
Sbjct: 837  RLRKQKTELESESENLKLSLDPLMKEKEELQKQLQKAVWAKESAVNETRRLLEDLRSELS 896

Query: 854  FQQ-EIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
             +  E E L K   K++EY+     E  +++++K    + E++  ++  DE    +D  +
Sbjct: 897  VRMLEREDLKKHFDKVQEYFQSNNPEELQDVRKKLDDLKGEIEHLQLVRDEKTALIDTLE 956

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE---LGKHL 969
              +  Q+   R ++DNL+    + + ++   +I+ ++ + ++  G+   E+E   +G+ +
Sbjct: 957  KKLSRQELRERELKDNLHLHMLQVQSEQHKVKIDEIKNQ-MRNSGLVNLESEKKKIGEKI 1015

Query: 970  --LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
              L  DR  SE  +  G + V + + +R ++      +KD  K++   L +    +  +K
Sbjct: 1016 NKLRGDRNFSESKK--GELKV-KIDAARRELS---GHFKDAKKKYMTALCEKSVKDYISK 1069

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----R 1083
            DLD YY A++ A++++H  KM++INK+I++LWQ TY G DIDY++I +D++  G     R
Sbjct: 1070 DLDMYYRAVNFAVLKYHEQKMKDINKVIKQLWQDTYSGDDIDYVQIRTDADEKGLENSRR 1129

Query: 1084 SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
            +Y+Y+V+M  G  E +MRGRCSAGQKVLASLIIRLALAETFC NCGILALDEPTTNLD  
Sbjct: 1130 AYNYRVVMMKGRIEQDMRGRCSAGQKVLASLIIRLALAETFCQNCGILALDEPTTNLDRS 1189

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR-QHAEKYYRVAKDDHQHS 1200
            N + LA +L +I+E R  Q NFQ+IVITHDE F +L+ QR   AE +Y+V K D  +S
Sbjct: 1190 NIKGLALSLGKIVEARMRQRNFQMIVITHDEEFLRLLSQRISVAEYFYKVEKTDMGYS 1247


>gi|350401885|ref|XP_003486295.1| PREDICTED: DNA repair protein RAD50-like [Bombus impatiens]
          Length = 1387

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 326/1263 (25%), Positives = 640/1263 (50%), Gaps = 127/1263 (10%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +++K +++ L  I     + V +S +CA++D E+   MGVSK IL+ VIF HQ++ NWP 
Sbjct: 109  VKFKTLDNALSRIMKGQNKPVSISNKCANVDAELTLAMGVSKPILDYVIFCHQEDLNWPF 168

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QD   LK+KFD+IF + R+ KALE I K  KD  Q++   K + +N Q + +        
Sbjct: 169  QDGKKLKEKFDEIFDSARFNKALENIMKYIKDMNQKMHILKEQKQNCQLIVNEVVDKEAK 228

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
               ++++ E  K +++E +K ++ +  KI   E    D + +Q++      R+   ++  
Sbjct: 229  FEDNKKRLEDSKAKIEEFDKELEPVQQKIKIFEKLDADYKNLQNE----EKRKKAEYDMF 284

Query: 181  QKQYAALAEEI----EDTDEE-LKNWKNNFEGIVAKRESD-ISKLEREKNDMDTKIKFLE 234
            ++Q   L E++    E T EE LK  +++ E ++  R++D I +LE+   ++  K   + 
Sbjct: 285  KQQLNRLEEDLQYVFEGTKEELLKQIESHDEELI--RQTDKIEELEKRLKNIAGKESSIS 342

Query: 235  QNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRI 294
             ++        +L  +      ++N R++ + ++ +  NL ++ +A  S    +   +R+
Sbjct: 343  SDLSNERVSNGSLRQQIKDQERKVNLRNAILNEILSSWNLDNI-DANVSELEIMALTSRL 401

Query: 295  RSRLSDLERDLED---KKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHI 351
              ++ +L   +E    K++ +E AL  A DS    + +   +E++K     +K   +   
Sbjct: 402  TEKMEELRHCVEQKRLKREEEENALHRAIDSLRSKHSK---VESEKN----LKESEVTQT 454

Query: 352  KEKEN--ERDSFELQISNLNLSHIDERENKMRI-EVERKTNQLAEREFEINIRQKQSELF 408
            KE+ N  + D  +L  +   LS I+     +RI EV++K  +L E   ++N+ +K+    
Sbjct: 455  KEEINKIKLDIVQLGAAASKLSSIE-----LRIQEVQKKVQELNE-AMDVNVVKKE---- 504

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKL----ALKKAELENHKKK---HKKIIDEYKDK--- 458
             +  KIK  N E + L    ++ + L    ++++AEL+ HK      +K I+E K+K   
Sbjct: 505  -VANKIKIRN-EMETLLNTVDEEITLLSKQSMQQAELDLHKSTLHAKEKEIEELKNKREK 562

Query: 459  -------IRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQE 511
                   I+++ + +L  + D+        + L  E + ++ + +  ++ +  L+  I  
Sbjct: 563  EIMTLFDIKELSQTKLKTNLDV------VQKQLANEMESINQEIQAEERRITTLETTISH 616

Query: 512  VTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTY----QKVLDSAKEKRDVQKSKYNI 567
            +   L   +++++S K           +++ S+  Y    + +L  +K+ +D+Q  +   
Sbjct: 617  IEHELQNKKREINSDK-----------EKVSSVCHYKSFDETLLLQSKKVKDLQDKRGMY 665

Query: 568  ADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESS 626
            A       +  +++   +  CP C R F   E     +K+   +  +    +K    E  
Sbjct: 666  AHQSVAYKEYMKQLRETNPSCPLCHRDFDERENVVTLLKEMESEMENHPNRLKECERELK 725

Query: 627  NADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKA 686
                 + ++ +L+ V E+ ++L +  +   EK ++ L +  ++ S +   V+G+  +   
Sbjct: 726  TQQEKYDKMLQLKPVVEKIIQLEESDL---EKLMNSLEKSKNKLSISRTTVMGLETKKSC 782

Query: 687  DKESVEV---LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQL---EL 739
             K+ + +   +V  +   D    +I   ++ +D+L+  + + G +  R++EE Q    EL
Sbjct: 783  PKKKLAICKDIVGDIMLWDTYIDDIFKLKQTIDNLQIRMTAAGIKTKRSLEEAQSQREEL 842

Query: 740  SGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELE 799
              SL    N+++ +E+L+ +       L+N +   +TL+EE+++  + ++ VK+ +E+LE
Sbjct: 843  KMSLK---NIRDNIEELQSKINMHNEKLNNARQEQNTLQEEQLRIQSDIQKVKELKEKLE 899

Query: 800  HLMEEKGQL----DLDEKLLAEASGPLSKEKEKLLSDY--NDLKVKLNREYEEQAEQKIN 853
             L  ++  L    ++ +K +A A   L+ E EKL      N  K++ +R+    A ++++
Sbjct: 900  TLYSKEISLWKSINMLKKQVAIAETELNSELEKLEEKRKDNSAKLECDRKLVTDAVRRLS 959

Query: 854  FQQEI--EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVE---- 907
              Q I  E+ + I S + E  +                SE ++K  +   +E+L E    
Sbjct: 960  ELQRIQDEVDISIYSNVPESLE---------------SSEKKIKDYEKLLNELLCEKSDI 1004

Query: 908  ---LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
               +++ K+ V  Q+  +R + DNL   + +  +     +   ++E++  I         
Sbjct: 1005 ETTINKLKENVTRQEVRKRELSDNLALLQVQETIKNLQQQYLRIKEKLNAINHSQVLND- 1063

Query: 965  LGKHLLERDR-LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTE 1023
              K++  R++ +L + N  +G     +  + +   +LK+  Y+   K +  + I+L   E
Sbjct: 1064 -WKNVQSREQTILRQQNIIKGNQEELERTLQQYTQELKKDIYRQARKNYKSKCIELTVIE 1122

Query: 1024 MANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-SEGAGT 1082
             A  +L  Y  ALD A++++H  +M  +N+II+++W+  Y G+D   I IH+D +EG G+
Sbjct: 1123 EAILNLKAYSKALDVAMIQYHEERMATVNRIIKQMWKLVYTGKDTTSIEIHTDATEGIGS 1182

Query: 1083 --RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
              R+Y+YK++      E++M+GRCSAGQKVLAS+IIRLALAETFC +CGILALDEPTTNL
Sbjct: 1183 TRRTYNYKLVQMKHGHEIDMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNL 1242

Query: 1141 DGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            D  NA+SLA AL  +++ R + Q+NFQLIVI+HDE+F   + +    + +Y++ +    +
Sbjct: 1243 DQENADSLAEALATVVKLRSQHQKNFQLIVISHDEKFLFKLAELNSNKGFYQLYRKQTGY 1302

Query: 1200 SII 1202
            + I
Sbjct: 1303 TAI 1305


>gi|321465214|gb|EFX76217.1| hypothetical protein DAPPUDRAFT_322547 [Daphnia pulex]
          Length = 1334

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 333/1256 (26%), Positives = 596/1256 (47%), Gaps = 117/1256 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            M++K I+  +  + P  G       +  D++  V   +GVSKA+L NV+F HQ+++NWPL
Sbjct: 108  MDFKTIDGTISIVQPD-GTLKSHKNKNNDLNTFVCNTLGVSKALLNNVLFCHQEDSNWPL 166

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            ++   +K KFDDIF+ TRY K  + I+K   +   ++K  +  ++  +  KD A + +  
Sbjct: 167  EEAKKVKDKFDDIFNTTRYVKCQDEIRKQMIEVKAKMKDIEKMVDRYKMQKDQAEEFQND 226

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
              +  E+   L+ +MQ+L+K+  ++D K+  +    ++  K + +I     R   L   +
Sbjct: 227  QRRHTERKAILEAEMQQLQKTKTELDAKLKQSMDQYREAEKTKAEIQRKKVRMEELERNR 286

Query: 181  QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
                + +   I  + E+L+     F+    +RE +++ L+RE   +D   K         
Sbjct: 287  HDLESDITRVITASVEDLEREIQRFQMTKGEREKELNVLQRELQRVDQSGKINAAAQQEQ 346

Query: 241  TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGS----LPNAPFSNEAALNFINRIRS 296
              ++  L SE   H +R+ ERD  +  L   +        L N P S+           S
Sbjct: 347  LVQLGKLQSEEEQHNNRIKERDCLLSNLARSYQWPGHSAFLSNQPLSSVQV--------S 398

Query: 297  RLSDLERDLEDKKKSDELALKMAWDS----YLDANDRWK----NIEAQKQAKMEIKAGIL 348
            +  DL +   +++K  E  LK   ++     L++ ++ +     +E   +AK        
Sbjct: 399  QYQDLLKQTVEQEKHKESVLKQELENEERRLLNSLNKLREECVRLEQDIKAKDTFLNTCQ 458

Query: 349  KHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELF 408
            + + E E + D+ E     + +  ++ ++ + +  V+R   +L E E   NI + +SE  
Sbjct: 459  RELSEIEAKLDAMEENSRQMTI--LERQQVEAQTLVDRAKRELNEDELIRNIDRAKSEKV 516

Query: 409  AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKII--DEYKDKIRDVLKGR 466
              + ++     +   + G  + RVKL + + +L + + + ++++  +  +D I+ +L G 
Sbjct: 517  MQEAELDHCRSQLKKVMGQRDIRVKLEMHQKDLSSKRTQERRLMSRETVEDAIK-ILVGD 575

Query: 467  LPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSK 526
                 +L       L+++      LSSK     K    L  +      NL   R  +DSK
Sbjct: 576  NANQDNLLSYYNGRLKSITA---SLSSKQHNLTK----LGQEGATCEANLRNIRSQLDSK 628

Query: 527  KRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIAD---------GMRQMFDP 577
                +S+L +  Q++ +  +      +A+ + D+ +    I D         G  +M++ 
Sbjct: 629  ----QSELSAHQQKLKNAGSS----GAAELENDIARLALEIQDLDDQRGLVHGSEKMYNH 680

Query: 578  F-ERV--ARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNAD--SYF 632
            F E++   RAH  CP C R F   +E   V    +K    A   K   L+   A+  S  
Sbjct: 681  FIEKMEKQRAHADCPLCHREFDDADES-LVLVDELKGRVEAMPTKKADLDRKIAEKKSKH 739

Query: 633  QQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVE 692
             QL +LR V +   KL++  IP  E  L +L        ++   ++ V   ++  +ES+E
Sbjct: 740  GQLLQLRPVAQSIAKLAEAEIPKLESGLKDL--------ESRSSIIQV--DLRDLEESIE 789

Query: 693  VL---------VQP-VETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQLELSG 741
             L           P +   D +  +I+  Q  VD+++  L   G +G  T+EE+Q ++  
Sbjct: 790  FLKNEEDIGKKAHPDIIQLDAVKTDIKKLQSLVDNIQAQLGLSGAEGSLTVEEVQEQVEK 849

Query: 742  SLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL 801
            + ++       +E + D     +N L+ +Q   + L E K++  N L+      E    L
Sbjct: 850  AEASYRLTTQSIESMNDRYNGHQNKLTQLQQNVNRLMERKLQLNNNLQQRGNLLERKTTL 909

Query: 802  ME--EKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIE 859
                EK +LD++E    +   P+  ++    + + D + K N    EQA +K+  ++ + 
Sbjct: 910  ETDIEKARLDVEE--WKQNLQPMVAKQLAAQATHVDSQKKRN-SLTEQARRKV--EELLN 964

Query: 860  MLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKI-------RTDEILVELDRFK 912
             L  +AS  KE      D +  +LQ     S+ EV+  K+       R  EI     + +
Sbjct: 965  QLRALASFDKEIEKWSADGKVAQLQ----HSQQEVERLKVEKLALEQRKMEIQENAKKIE 1020

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFET-ELGKHLLE 971
              + N +   RN+ +NL              E++ L         ++T ET +L + + E
Sbjct: 1021 LALSNCENEERNLRNNLKLIVNTTDRQVVKQELDQL---------IATLETFKLQQLVKE 1071

Query: 972  RDRLLSEVNRCQ-------GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
              RL  ++ RC+       GT    + +I   ++ L++ ++   ++R+ DQ+   +  + 
Sbjct: 1072 IQRLEEQLERCKIRLGELNGTFQEIEKSIRELEVKLRREEFATAEERYLDQVKDFEIHQG 1131

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA---- 1080
             ++DL  +YNAL+ ALM+FH  +M  IN+++RE+W  TY+G+DIDY+ IH++  GA    
Sbjct: 1132 ISEDLANFYNALESALMKFHKERMSVINRMVREMWHSTYKGKDIDYVEIHAEESGALGVN 1191

Query: 1081 GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
              R Y+Y+V+M     E++MRGRCSAGQKVLASLIIR+ALAE F   CG+LALDEPTTNL
Sbjct: 1192 SRRQYNYRVVMVKNGVEMDMRGRCSAGQKVLASLIIRMALAEAFSSKCGVLALDEPTTNL 1251

Query: 1141 DGPNAESLAAALHRIMEDRKGQE-NFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            D  N  SL+  +  +      Q+  FQLIVITHDE+F + + + +  EK+YRV ++
Sbjct: 1252 DEDNIASLSDTILELSNAITRQKRKFQLIVITHDEKFLERMSRDKRMEKFYRVDRN 1307


>gi|383858718|ref|XP_003704846.1| PREDICTED: DNA repair protein RAD50-like [Megachile rotundata]
          Length = 1378

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 315/1244 (25%), Positives = 605/1244 (48%), Gaps = 113/1244 (9%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            M +K ++S L  I+  T E V ++ RC ++D E+   MGVSK IL+ VIF HQ++ NWP 
Sbjct: 109  MRFKTLDSALSRISKVTKEVVSITNRCTNVDTEITLAMGVSKPILDYVIFCHQEDLNWPF 168

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLEN----LQTLKDAAYK 116
             +   LK+KFD+IF + RY KALE I K  KD  Q I   K + +N    +  L+D   K
Sbjct: 169  VEGKKLKEKFDEIFDSARYNKALENIMKQIKDLRQRILILKEQKQNCLYIVSELEDKETK 228

Query: 117  LRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL 176
            L +     +++ E +K +++E+ + ++ +  KI   E    D + +  +      R+ T 
Sbjct: 229  LEDH----KKRLETIKQKIEEINEDLEPVTQKIAEIEKLDSDYKDLMSE----EKRKKTE 280

Query: 177  FEQQQKQYAALAEEI----EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            +   ++Q   L E I    E T +EL+    +++G + K+  +I +LE +  D+  +   
Sbjct: 281  YMMSKEQVEKLKENITEIFEGTLKELEEQLKSYDGNLIKKVDEIKELETQLKDIVKE--- 337

Query: 233  LEQNIDAYTAE--ITN--LLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
             E  I    A+  +TN  L  +      ++  R+  + +  +  NL ++ ++  S    +
Sbjct: 338  -ESKISKMLADERVTNGSLRQQIKDQERKVTLRNKILNEALSAWNLENI-DSNVSELEVI 395

Query: 289  NFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGIL 348
                R+  ++ +L + L++ +   E           +  +  K ++  +  K+++++   
Sbjct: 396  ALSKRLEEKMWELNKKLDENRMQRE----------EEEKEVQKTVDILRSEKLKVESQ-- 443

Query: 349  KHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEIN--------- 399
            K IKE E      EL    + +  I    NK+   +E K  +   +  ++N         
Sbjct: 444  KSIKENEMTETRDELNKIKMEILQIGAAANKLN-SIESKIKETKNKLEQLNEIMDVDTMK 502

Query: 400  --IRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKD 457
              +  K      ++ ++ +++ E   L   S  + +L L K+ L + +K+ +K+ +++++
Sbjct: 503  KEVLNKTQSRNKLETRLNSVDEEISSLLKQSSLQAELELNKSSLLSKEKEIQKLKEKHEE 562

Query: 458  KIRDVLK-GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL 516
            KI  +L    LPL + LK ++    + L+ E + ++ + +  + +   L+  I+ +   L
Sbjct: 563  KITKLLNIPELPLSK-LKSDLDTVQKQLMNEMEQINQEIQTEEHQSTTLETTIKHLDHEL 621

Query: 517  SKHRKDVDSKKRFIESKLESLNQQIFSIDTY----QKVLDSAKEKRDVQKSKYNIADGMR 572
             K +K+++S K           Q+I SI  Y    + +L  +++ +D+Q  +   A    
Sbjct: 622  QKKKKEIESDK-----------QKIASICYYKNFDETLLLQSRKVKDLQDRRGMYAHQGA 670

Query: 573  QMFDPFERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSY 631
               +  +++   +  CP C R F   E     +K+   +  S    +K    E       
Sbjct: 671  AYKEYMKQLKETNPCCPLCHRGFDEREAVVTLLKEMEKEMESHPNRLKECETELKIQQEK 730

Query: 632  FQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESV 691
            + ++ +L+ V E+ V+L +  + +   NL    E+   K  +   V+  L + K+D E+ 
Sbjct: 731  YDKMLQLKPVVEKIVQLEEMELGMMMNNL----EKSKNKLTSSQKVITKLKEKKSDPEN- 785

Query: 692  EVLVQPVETADRLFQEIQLWQKQVDDLE-----------YMLDSRGQGVRTMEEIQLELS 740
                  +   + +  +I LW   +D++             M+++  +  R++EE Q +  
Sbjct: 786  -----KLTICNEIMNDITLWDNYIDEISKFKQLINNFQTRMINAGIKTDRSLEEAQADRE 840

Query: 741  GSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEH 800
               +   N  NE+E L+ +       ++N +   + L EEK+K  + ++++K+ +++ E 
Sbjct: 841  ELKTLLKNTSNEIEILQSKINTHNEKINNAREEQNKLHEEKLKIESNMQNLKQLKDQQES 900

Query: 801  LMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEM 860
            L  ++  L             L   ++K+ S  ++L   +++  +++ E     + + ++
Sbjct: 901  LYSKEISL----------GSLLDSLRQKMTSAESELNEAVDKLEKKKKENWEKQETDRKL 950

Query: 861  LLKIASKIKEYYDLRKD---ERFKELQEKKSQSESEVKSCKIRTDEIL-------VELDR 910
            L   + ++ E    + +     + ++ E   +SES++KS +   DE+L        ++ +
Sbjct: 951  LADGSRRLSELQKAQDEVDISIYHKIPEAVERSESQIKSYQQSIDELLQKKSNTESKISK 1010

Query: 911  FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLL 970
             K+ +  Q+  +R + DN+  R+ +    K   E  SL+E++  +      E       L
Sbjct: 1011 LKEDISRQEIRKRELSDNILLRKNEETTTKLEKEYLSLKEKLSAVNYSQMLEERKDLQSL 1070

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            E+  LL + N  +G     +  + +   +LK+  Y+   K H  + I+L   E    +L 
Sbjct: 1071 EQ-ALLRKKNMIKGNQEELERAVKQFSDELKKDIYRQARKNHKTKCIELTVVEETISNLK 1129

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-SEGAGT--RSYSY 1087
             Y   LD A++ +H  +M  +N+I+RE+W+  Y G D   I I +D +EG G   R+Y+Y
Sbjct: 1130 AYSKVLDVAMIEYHEERMSTVNRIMREMWRLVYTGTDTTSIEIRTDATEGIGNLRRTYNY 1189

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            K++      E++M+GRCSAGQKVLAS+IIRLALAETFC NCG+LALDEPTTNLD  NA+S
Sbjct: 1190 KLVQTKHGREIDMKGRCSAGQKVLASIIIRLALAETFCKNCGVLALDEPTTNLDQENADS 1249

Query: 1148 LAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQHAEKYY 1190
            LA+AL  +++ R + Q+NFQLIVI+HDE+F   + +  + + +Y
Sbjct: 1250 LASALATVVKLRAQHQKNFQLIVISHDEKFLLKLAELNNNKGFY 1293


>gi|390346716|ref|XP_786771.3| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
            purpuratus]
          Length = 900

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 205/647 (31%), Positives = 358/647 (55%), Gaps = 23/647 (3%)

Query: 570  GMRQMFDPF-ERVARAHHVCPCCERPF-SAEEEDEFVK----KQRVKAASSAEHMKVLSL 623
            G + +FD + + + R   +CP C R F S  E  E V+    K R+  +  AE  + ++ 
Sbjct: 250  GSKHLFDRYIQSLQRTDALCPLCHRGFDSGAEVQELVQELQDKLRLAPSKLAEKERTITK 309

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQ 683
            +   +D    +L  LR + +   KLS+  IP  +  L  +  ++++ +    +    ++ 
Sbjct: 310  QREKSD----RLLVLRPIKDAAKKLSEREIPDLKLKLSAVNADIEKLNATVMEAEDNVSM 365

Query: 684  IKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL 743
            ++ D+     +   ++  ++   E++  ++++ +      S     RT++++  E +   
Sbjct: 366  LQVDEAMARDMKPDIQILEKTLTELRDLERKIGEQSKYF-SGSDISRTLQQVNTETAEVK 424

Query: 744  STKDNLQNELE-KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
               + +++ LE K R  Q +++N ++ ++I  +++  E ++ +  L+  +K E E   L 
Sbjct: 425  IKLNTVRSTLELKQRQRQEHVDN-VNMMRISINSITSETLRLSAKLQKREKLESEQAELS 483

Query: 803  EEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLL 862
                    + +   +   P+  + +KL  D   +  K   E +E  E+    QQ++  + 
Sbjct: 484  TNTRTFQREIEDSRQEQRPIKDKLQKLAQDKVAITQKKESEIKEIREKIDEVQQQLRDIR 543

Query: 863  KIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIR 922
               S I +Y    K+ +  +++ K       +         +   +++ KD + NQ    
Sbjct: 544  AGTSNIAKYVTDGKEAKLDDVEVKIMDLNERLTKLGEDLSLMTATIEQLKDDISNQKVKE 603

Query: 923  RNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDR--LLSEVN 980
              + +N+  ++ + +V+K + EIE L+E   K+GG +    E  K  +E+ +  L  E N
Sbjct: 604  MELGNNMRLKKYQQEVEKKSGEIEKLQE---KLGGYNLITIEREKTEMEKKKVALNREKN 660

Query: 981  RCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKAL 1040
            +  G  +  +  ++R + +L+   YK+ +K + D +I+ +TTE+ANKDLD+YYNAL+ A+
Sbjct: 661  QLDGRSTELRKEVTRQERELESDSYKNAEKNYNDMMIKCRTTEIANKDLDKYYNALNSAI 720

Query: 1041 MRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GAGT---RSYSYKVLMQTGDA 1096
              +H+ KM EINKI+R+LW+ TY+G DID+I I +D E GA T   R Y+Y+V+M  GD 
Sbjct: 721  NTYHSQKMSEINKIVRDLWRMTYKGSDIDFIEICADDETGASTTQRRQYNYRVVMVKGDT 780

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
             L+MRGRCSAGQKVLASL+IRLALAETFCL+CGILALDEPTTNLD  N ESLA AL  I+
Sbjct: 781  ALDMRGRCSAGQKVLASLLIRLALAETFCLSCGILALDEPTTNLDRDNIESLAHALVDIL 840

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK-DDHQHSII 1202
            + R+ Q NFQL++ITHDE F +L+G   + + YYRV K +D++ +++
Sbjct: 841  KSRENQRNFQLLIITHDEEFVELLGHSDYTDNYYRVTKNNDYKSTVV 887


>gi|121708404|ref|XP_001272120.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1]
 gi|119400268|gb|EAW10694.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1]
          Length = 1382

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 242/750 (32%), Positives = 386/750 (51%), Gaps = 54/750 (7%)

Query: 482  RALLTEFDDLSSKSREAD---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLN 538
            R L  +  DLS    + D   +E+  ++ K++     L++ +K++ S  + I    E++N
Sbjct: 574  RVLEEQSRDLSKAESQRDGVSRELEQVEFKLKTAKKTLTQRQKELSSCAKEIR---EAIN 630

Query: 539  QQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAE 598
            +     + Y +VL   + + DV +       G+          AR   VC  C R F  +
Sbjct: 631  E---DPEEYPEVLRQRQAQLDVARRDAEQTAGIGDYMMRCLETARQAKVCRLCSRTFKDD 687

Query: 599  EEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---YEEYVKLSKETIPV 655
             E    +K+       A+    L++E    + +  +LD  R     Y+ + +LSK  IP 
Sbjct: 688  AEFTVFRKRLEGLVKKAQ----LNVEEEGVERFESELDTARAASTSYDTWTRLSKTEIPD 743

Query: 656  AEKNLHELT---EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQ 712
             EK   +     +EL  + +  D ++G  A+    K  VE L + V T  R   EI+  +
Sbjct: 744  LEKEEDQYVLQRDELLDQLENHDKIVGEKAE---KKREVEALSKTVNTIARYDSEIKTIR 800

Query: 713  KQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
             Q+ DL           RT+E+IQ E++G       L+  L KL +++     +++N+++
Sbjct: 801  SQIQDLSAKQKDTA-AARTLEDIQEEIAGIGEKSRTLKKSLAKLSNDREQARTEMNNLEL 859

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLME------------EKGQLDLDEKLLAEASG 820
            +   LR+ + K  NT   +++  + L  + E            EK   D++E        
Sbjct: 860  Q---LRDARSKLDNTKFQLERKADLLSRIEEYKNLNNQQREAIEKADRDIEE-------- 908

Query: 821  PLSKEKEKLLSDYNDLKVKL-NREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDER 879
             L+ E  K  + Y+D+  ++  RE E Q  Q IN   E    L +A++  + Y+ R    
Sbjct: 909  -LTPELLKYQAQYDDITQRVEGRERELQ--QGINQLSENIRQLDVATEEIDSYNERGGPS 965

Query: 880  FKELQEKKSQS-ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
              E   ++ Q+ E+E+   +     I  E+++    +++ +  +R   DNL YR+    +
Sbjct: 966  QLERSRRELQTIENEISQLEAEQGNITKEINKISAQLKDSENTKRQYSDNLTYRQATRTL 1025

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
             + ++E+E L  +   +   S F+ E  +   E + L ++     G M      + +   
Sbjct: 1026 AEVSAEVEQLAAQNADVDR-SRFKDESERRTREHNALAAKQASKMGEMKSKDDQLMQLLA 1084

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D     YKD   ++ +  I+++TT+ A  DL RY  ALDKA+M++H++KMEEIN II EL
Sbjct: 1085 DWN-TDYKDATSKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINAIIGEL 1143

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIR
Sbjct: 1144 WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIR 1203

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 1204 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFL 1263

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1264 RHMQCGDFSDYYYRVSRNEKQKSIIERQSI 1293


>gi|242022760|ref|XP_002431806.1| DNA repair protein RAD50, putative [Pediculus humanus corporis]
 gi|212517138|gb|EEB19068.1| DNA repair protein RAD50, putative [Pediculus humanus corporis]
          Length = 1330

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 326/1277 (25%), Positives = 607/1277 (47%), Gaps = 177/1277 (13%)

Query: 4    KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
            K++++V+   +  T EKV +S RCAD   E+  + GVS++ILENVIF  QD+++WPL   
Sbjct: 110  KSLDNVITRTDRETKEKVSISNRCADFTFEISRIFGVSRSILENVIFCTQDDSHWPLDTD 169

Query: 64   STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
              LK+KFD IF + +Y K +  +++  K     +K+ +++L+ L+  K+ A + R  + +
Sbjct: 170  QKLKEKFDQIFDSDKYNKCVNKVREKRKKLKDVLKSTEIELKYLKENKNIAVEKRRVMEK 229

Query: 124  DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             + + E+ K ++ EL  ++ D+++K       LK++ + +  IS   A +    E ++ +
Sbjct: 230  TKLQVESCKEEIFELNSALVDVENK-------LKEVNEKELTISKSHANK----EMKKAE 278

Query: 184  YAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFL-------EQN 236
                   + +    +KN+ N  +           +LE+E  D + ++ F        E N
Sbjct: 279  LKGNENILTELKSRIKNFYNGTD----------EELEKEIKDFNKQLSFKQKEINDEENN 328

Query: 237  IDAYTAE---ITN-LLSEAGA----------HMSRMNERDSTIQKLFARHNLGSLPNAPF 282
            +  YTAE   +TN L++E G           +  R+  R+  + KL +   L    ++  
Sbjct: 329  VKNYTAEEMSLTNKLMNEQGMLGQLLKEDELNNERIERRNKELVKLAS--TLEITVDSEI 386

Query: 283  SNEAALNFINRIRSRLSDLERD-------LEDKKKSDELALKMAWDSYLDANDRWKNIEA 335
             + +    +N +  ++   E +       LE++ ++ ++ +    + YL           
Sbjct: 387  DDNSIQELMNGVNKKIKKEEENFKKTKQWLEEEDQNSQIKIDKIREEYLTT--------- 437

Query: 336  QKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE 395
              Q++M  K   LK+IK    +R+  +L+     L  +DE   K++    R  ++L+E  
Sbjct: 438  --QSEMSAKEKNLKNIK---TQREKIKLE-----LYEMDESAGKLK----RLESKLSEVN 483

Query: 396  FEINIRQKQSELFAMDQKIKALNREKDVLAGD---SEDRVKLALKKAEL----------- 441
             +I   +K +++  + + IK  + E++ L  D    ED+VK   K + L           
Sbjct: 484  LDIENLEKTTDVETLRENIKKYSNERNKLEDDLSEMEDKVKELQKHSSLATELEVQLELK 543

Query: 442  ENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKE 501
             N   +++++I++++D ++ +L G +P     K +   AL+            +R+  KE
Sbjct: 544  SNKDSQYRRLINKHEDNLQTIL-GEVP-----KSKFKMALQNHFL-------NARQKVKE 590

Query: 502  VNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI-------DTYQKVLDSA 554
            V+ L+ K ++    L   RK +  K +  E  L +  + I+ I       +T  ++    
Sbjct: 591  VSALRSKKEKELTELEMKRKHLKDKLKAKEEVLRTNEEDIYEICGSDDFDETVSRLQKEI 650

Query: 555  KEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEED-EFVKKQRVKAAS 613
            +E +D+ K   + ++ M Q +     + +    CP C R F+ E +    V++   K   
Sbjct: 651  EELQDI-KGTLSSSEFMYQRY--IRALEKTEPCCPLCHRDFTRESDARSLVEELNSKIRQ 707

Query: 614  SAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQA 673
                ++    +     + + +L  L+   +E   L    IP  +  L  ++  L +K + 
Sbjct: 708  VPRRLQENKTQLEEKQTKYNKLLTLKSKNDEISSLKDGEIPEIKSELDAVSSSLKKKQKE 767

Query: 674  FDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTME 733
              DV   ++  +AD+     L   +   D L  E    QKQ++ L+  L ++G    T++
Sbjct: 768  LSDVGNEISSSQADEAICLSLQDDMVLLDELQSERDYMQKQINSLQDRLGNKGIDKNTLK 827

Query: 734  EIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
             +Q E        D  +  L+  R +    + +L+N          +K++   TLR+   
Sbjct: 828  NVQDEC-------DRKRQNLKLARVKADEFQTELNNFN--------DKIQGKQTLRN--- 869

Query: 794  AEEELEHLMEE--KGQLDLDEKL-LAEASGPLSKEKEKLLSDYNDLK----VKLNREYEE 846
                   L+EE  K Q  + +K  L E    L  E+  L+++  DLK    V+     E 
Sbjct: 870  ------SLIEEINKIQGSIGKKTGLIERVQDLEGEEAILIAELEDLKKNSNVRKKNLDEL 923

Query: 847  QAEQKINFQQEIEMLLKIASKIKEYYDLRKD--------------------ERFKELQEK 886
             +E+K+   + +E++ +I +KI +   L KD                    E+ + +QE 
Sbjct: 924  LSERKLEKNKNMEIIERITNKINK---LMKDFDEINCQNKIIEDHGKKGISEKIQVVQET 980

Query: 887  KSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIE 946
              + E E++  K + ++   +++  K  + NQ+ + R + DNL YR    + +    E+E
Sbjct: 981  MKKFEMEIREIKNKKEDSGKKINNIKKGITNQELVERELNDNLRYRRKTIETENLRKEVE 1040

Query: 947  SLEERVLKIGGVSTFETEL--GKHLLER-DRLLSEVNRCQGTMSVYQTNISRNKIDLKQA 1003
             +E++     G + F+  L   ++L  + D +     + QG MS  +  +   + +L   
Sbjct: 1041 DMEKKF----GNANFDGLLREKRNLKSKEDDIGKRKAQIQGRMSEMENQMKMIEKELLGK 1096

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
              ++ID+ + ++ ++ +  +    DL+RY   ++ A+M +H  +M  +N  IRE W++ Y
Sbjct: 1097 TLRNIDENYNNENLKFEVIKAIGNDLERYATTMEYAMMTYHKQQMTRVNAFIREYWRKIY 1156

Query: 1064 RGQDIDYIRIHSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALA 1121
            +G DIDYI I +D+       R+Y+YKV+    +  LEMR RCSAGQK+LASLIIRLALA
Sbjct: 1157 QGNDIDYIEIQTDNIESTEKRRNYNYKVVQIKSNVHLEMRNRCSAGQKMLASLIIRLALA 1216

Query: 1122 ETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM--EDRKGQENFQLIVITHDERFAQL 1179
            ETF  NCGIL LDEPTTNLD  N ++LA  L+ ++  +    + NFQLIVITHDE F Q 
Sbjct: 1217 ETFSSNCGILTLDEPTTNLDRKNIKNLARTLNEVLLAKQNSSKPNFQLIVITHDEEFLQE 1276

Query: 1180 IGQRQHAEKYYRVAKDD 1196
            + +     +Y +V +++
Sbjct: 1277 LMELDMVNEYVKVDRNN 1293


>gi|328781019|ref|XP_003249903.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50 [Apis
            mellifera]
          Length = 1377

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 317/1257 (25%), Positives = 611/1257 (48%), Gaps = 119/1257 (9%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K ++S L  IN  T E + ++ RC ++D E+   MGVSK IL+ VIF HQ++ +WP QD
Sbjct: 110  FKTLDSALSRINKDTKEVISITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLSWPFQD 169

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK++FD+IF + ++ KALE I KL KD  Q +   K + +N Q + +        + 
Sbjct: 170  GKKLKERFDEIFDSAKFNKALESIMKLIKDLKQRVNILKEQKQNYQLIVNEVIDKETKLE 229

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
             ++++ E  K +++E  K ++ +  KI       K L KM  +   + + +    ++++ 
Sbjct: 230  DNKKRLENSKIKIEEFNKELEPVIQKI-------KKLEKMDVEYKDLQSEQ----KRKKA 278

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDI----SKLEREKNDMDTKIKFL----- 233
            +Y    +++++  E+L+N    FEG   K   +I     KL  + N++D   K L     
Sbjct: 279  EYDMFKQQLDNLKEDLQNI---FEGTTEKLLKEIESYDEKLIGKINEIDEFKKKLRDIAE 335

Query: 234  -EQNIDAYTAE--ITN--LLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
             E  I    A   +TN  L  +   H  ++  R+  + +  +  NL ++ ++  S    +
Sbjct: 336  KESTISNKLANERVTNGSLRQQIKDHEKKVILRNQILNESLSSWNL-NIVDSNVSELEVI 394

Query: 289  NFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDA-NDRWKNIEAQKQAKMEIKAGI 347
             F  R++ ++ +LE  LE+ K   E   +      +DA  D++  ++ +K  K       
Sbjct: 395  AFTKRLQEKMRELEHKLEENKIKRE-EEEKELQKVVDALRDKYLKLDTEKNLKE------ 447

Query: 348  LKHIKEKENERDSFELQISNLN-----LSHIDERENKMRIEVERKTNQL------AEREF 396
               I E   E D  +L I  L+     L+ I+ +  K++I +++  + L       E + 
Sbjct: 448  -NEIIETRKEIDKMKLDIMQLSAESNKLNFIESKLQKVQIRIQQLNDSLNVDTMKKEIDD 506

Query: 397  EINIRQKQSELF-AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEY 455
            +I IR +   L   +D++I  L ++  +      ++  L +K+ E+E  K KH++ I   
Sbjct: 507  KIKIRNEMDILLNTIDEEITLLLKQSSLQTELELNKSTLVIKEKEIEKLKNKHEEKIISL 566

Query: 456  KDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDN 515
             D I+D+ + +L  + D+        + L+ E + ++ K R  + ++  L+  I  +   
Sbjct: 567  LD-IKDLSQIKLKNNFDI------VQKELINEIESINQKIRTEEHQIATLETTISHIEHE 619

Query: 516  LSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIADGMRQM 574
            L   +K+++  K  I     SL   I S   + +V L  +K+ +D Q  +   A      
Sbjct: 620  LQNKKKEINLNKEKI-----SL---ICSYKNFDEVLLLQSKKVKDFQDKRGMFAHQSAAY 671

Query: 575  FDPFERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQ 633
             +  +++   +  CP C R F   E     +K+   +  +    +K    E       + 
Sbjct: 672  KEYMKQLRNTNPCCPLCHRGFDKIETITTLLKEMETEIENHPNRLKXCEKELIIQQEKYD 731

Query: 634  QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
            ++ +L+ V E  ++L        E  L +L   L++     ++   +  ++K  K + E 
Sbjct: 732  KMLQLKPVVERIIQLE-------EIELEKLMSNLEKFKNKLNESRTIAIELKTKKSNPE- 783

Query: 694  LVQPVETADRLFQEIQLWQKQVDDL--------EYMLDSRGQGV---RTMEEIQLELSGS 742
              + +     +  ++ LW   +DD+         + +     G+   R+++E Q E    
Sbjct: 784  --KKLVMCKDIISDVMLWDTYIDDIFKLKQIIDNFHIRMTAAGIKTKRSLQEAQTEREEL 841

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
              +   ++  +E+L+ E       L N Q   +TL +E++K  + ++ +K+ ++  E L 
Sbjct: 842  KISLKKIRENIERLQFEINMYNEKLHNNQQEQNTLHKEQLKIQSDMQKLKELKDNQEILY 901

Query: 803  EEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLL 862
             ++  L      L E    ++  + +L S ++ L+ K    +E+Q   +       +++ 
Sbjct: 902  LKEISLGKSIDTLRE---KITLSETELNSGFDKLEKKKKDNWEKQETDR-------KLIT 951

Query: 863  KIASKIKEYYDLRKDER---FKELQEKKSQSESEVKS---------CKIRTDEILVELDR 910
            + + ++ +   ++ D     ++++ E    SES++KS         CK   ++I   +++
Sbjct: 952  EGSRRLSDLQKMQDDVDSFIYRKIPESLECSESKIKSYEKLLNELFCK--KNDIETTINK 1009

Query: 911  FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLL 970
             K+ +  Q+  +R + DN+  RE +  ++    +  +++E++  I     F+    ++L 
Sbjct: 1010 LKEEMTRQEVRKRELSDNVKLREIQEIINNLQEQYSNIKEKLNTINYSEIFDE--WQNLQ 1067

Query: 971  ERDR-LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
             R++ +L + N  +G     +  + +   +LK+  YK   K +  + I+L   E +  +L
Sbjct: 1068 SREQTILRQKNIIKGNQEELERTVQQYVQELKKDIYKQAHKNYKSKCIELTVVEESILNL 1127

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-SEGAGT--RSYS 1086
              Y   LD A++++H  +M  +N+II++LW+  Y G D   I I +D +EG G   R+Y+
Sbjct: 1128 KEYSKVLDTAMIQYHEERMATVNRIIKQLWKLVYTGTDTTSIEIRTDATEGIGGTKRTYN 1187

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            YK++      E++M+GRCSAGQKVLAS+IIRLALAETFC +CGILALDEPTTNLD  NA+
Sbjct: 1188 YKLIQMKHGHEIDMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLDQENAD 1247

Query: 1147 SLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            SLA  L  +++ R + Q+NFQLIVI+HDE+F   + +    + +Y++ +    +S +
Sbjct: 1248 SLANTLATVVKLRSQHQKNFQLIVISHDEKFLFKLAELSSNKGFYQLYRKQTGYSTV 1304


>gi|340718254|ref|XP_003397586.1| PREDICTED: DNA repair protein RAD50-like [Bombus terrestris]
          Length = 1387

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 317/1267 (25%), Positives = 619/1267 (48%), Gaps = 135/1267 (10%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            +++K +++ L  I     + + +S +CA++D E+   MGVSK IL+ VIF HQ++ NWP 
Sbjct: 109  VKFKTLDNALTRIVKGQNKVLSISNKCANVDTELTLAMGVSKPILDYVIFCHQEDLNWPF 168

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QD   LK+KFD+IF + R+ KALE I K  KD  Q++   K + +N Q +          
Sbjct: 169  QDGKKLKEKFDEIFDSARFNKALENIMKYIKDMNQKMHILKEQKQNCQLIVSEVADKEAK 228

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            +  ++++ E  K ++ E +K ++ +  KI   E    D + +Q++     A    +F+QQ
Sbjct: 229  LEDNKKRLEDSKAKIVEFDKELEPVQQKIKKFEKLDADYKNLQNEEKRKKAEYD-MFKQQ 287

Query: 181  ------QKQYA------ALAEEIEDTDEELKNWKNNFEGI------VAKRESDISKLERE 222
                    QY        L ++IE  DEEL    +  E +      +A +ES IS     
Sbjct: 288  LDRLEEDLQYVFEGTKEELLKQIESHDEELIGQTDKIEELAKRLKNIAGKESSISS---- 343

Query: 223  KNDMDTKIKFLEQNIDAYTAEITN--LLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNA 280
                           D     ++N  L  +   H  ++N R++ + ++ +  N+ ++ + 
Sbjct: 344  ---------------DLSNERVSNGSLRQQIKDHERKVNLRNAILNEILSSWNIDNI-DT 387

Query: 281  PFSNEAALNFINRIRSRLSDLERDLED---KKKSDELALKMAWDSYLDANDRWKNIEAQK 337
              S    +   +R+  ++ +L   +E    K++ +E AL  A DS    + +   +E++K
Sbjct: 388  NVSELEIMALTSRLTEKMEELRHCVEQKRLKREEEENALHKAIDSLRSKHSK---VESEK 444

Query: 338  QAKMEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRI-EVERKTNQLAE--- 393
              K          + + + E +  +L I+ L  +       ++RI EV++K  +L E   
Sbjct: 445  NLKES-------EVTQTKEEINKIKLDIAQLGAAASKLSSIELRIQEVQKKVQELNEAMD 497

Query: 394  -------REFEINIRQKQSELF-AMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHK 445
                      +I IR +   L   +DQ+I  L+++       S  + +L L K+ L++ +
Sbjct: 498  VNVVKKEVVNKIKIRNEMETLLNTVDQEITLLSKQ-------STQQAELDLNKSTLDSKE 550

Query: 446  KKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNML 505
            K+ +++ ++ ++ I  +   +      LK  +    + L  E + ++ + +  ++ +  L
Sbjct: 551  KEIEELKNKREEDIMTLFDIKELSQTKLKTNLDVVQKQLANEMESINQEIQAEERRITTL 610

Query: 506  QMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTY----QKVLDSAKEKRDVQ 561
            +  I  +   L   +++++S K           +++ S+  Y    + +L  +K+ +D+Q
Sbjct: 611  ETTISHIEHELQNKKREINSDK-----------EKVSSVCHYKSFDETLLLQSKKVKDLQ 659

Query: 562  KSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKV 620
              +   A       +  +++   +  CP C R F   E     +K+   +  +    +K 
Sbjct: 660  DKRGMYAHQSVAYKEYMKQLRETNPSCPLCHRDFDKRENVVTLLKEMESEMENHPNRLKE 719

Query: 621  LSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGV 680
               E       + ++ +L+ V E+ ++L +  +   EK ++ L +  ++ S +   V+ +
Sbjct: 720  CERELKTQQEKYDKMLQLKPVVEKIIQLEESEL---EKLMNSLEKSKNKLSISRTTVMEL 776

Query: 681  LAQIKADKESVEV---LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQ 736
              +    K+ + +   +V  +   D    +I   ++ +D+L+  + + G +  R++EE Q
Sbjct: 777  ETKKTCPKKKLAICKDIVGDIMLWDTYIDDISKLKQTIDNLQIRMTAAGIKTKRSLEEAQ 836

Query: 737  L---ELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 793
                EL  SL    N+++ +E+L+ +       L+N +   +TL+EEK+K  + ++ VK+
Sbjct: 837  SQREELKMSLK---NIRDNIEELQSKINMHNEKLNNARQEQNTLQEEKLKIQSDIQKVKE 893

Query: 794  AEEELEHLMEEKGQL----DLDEKLLAEASGPLSKEKEKLLSDY--NDLKVKLNREYEEQ 847
             +E+ E L  ++  L    ++ +K +  A   L+ E EKL      N  K++ +R+    
Sbjct: 894  LKEKQETLYSKEISLWKSINILKKQVTIAETELNSELEKLEEKRKDNSAKLECDRKLVTD 953

Query: 848  AEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVE 907
            A ++++  Q I+  + I+              +  + E    SE ++K  +   +E+L E
Sbjct: 954  AVRRLSELQRIQDEVDISV-------------YNNVPESLENSEKKIKDYEKLLNELLCE 1000

Query: 908  -------LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
                   +++ K+ V  Q+  +R + DNL   +T+        +   ++E++  I     
Sbjct: 1001 KSDIETTINKLKENVTRQEVRKRELSDNLALLQTQETTKNLQQKYLKIKEKLNAINYSQV 1060

Query: 961  FETELGKHLLERDR-LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQL 1019
                  K++  R++ +L + N  +G     +  + +   +LK+  Y+   K +  + I+L
Sbjct: 1061 LND--WKNVQSREQTILRQQNIIKGNQEELERTLQQYTQELKKDIYRQARKNYKSKCIEL 1118

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-SE 1078
               E A  +L  Y  ALD A++++H  +M  +N+II+++W+  Y G+D   I IH+D +E
Sbjct: 1119 TVIEEAILNLKAYSKALDVAMIQYHEERMATVNRIIKQMWKLVYTGKDTTSIEIHTDATE 1178

Query: 1079 GAGT--RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
            G G+  R+Y+YK++      E++M+GRCSAGQKVLAS+IIRLALAETFC +CGILALDEP
Sbjct: 1179 GIGSTRRTYNYKLVQMKHGHEIDMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEP 1238

Query: 1137 TTNLDGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            TTNLD  NA+SLA AL  +++ R + Q+NFQLIVI+HDE+F   + +    + +Y++ + 
Sbjct: 1239 TTNLDQENADSLAEALATVVKLRSQHQKNFQLIVISHDEKFLFKLAELNSNKGFYQLYRK 1298

Query: 1196 DHQHSII 1202
             + ++ I
Sbjct: 1299 QNGYTAI 1305


>gi|195426264|ref|XP_002061260.1| GK20820 [Drosophila willistoni]
 gi|194157345|gb|EDW72246.1| GK20820 [Drosophila willistoni]
          Length = 1320

 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 328/1274 (25%), Positives = 597/1274 (46%), Gaps = 191/1274 (14%)

Query: 23   LSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 82
            LS R  D++  +   MGVS+AI+ NV+  HQ++++WPL +   LK+KFD IF  T Y KA
Sbjct: 137  LSGRTVDINVTISDFMGVSEAIINNVLLCHQEDSSWPLDEAKKLKEKFDAIFGITEYNKA 196

Query: 83   LEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSI 142
            L+ I K+ K+    +K  +  ++++  LK        ++ + +EK E +K+Q Q+ E  +
Sbjct: 197  LDKIIKMRKEAKDALKVMEAGMKHIAYLKQEMEAKSLNLQKAEEKCEDIKSQCQKCEDDM 256

Query: 143  QDIDDKI---------------HHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAAL 187
            + +D+++                  E+  K  +  ++QI+T++ +  TLFE       +L
Sbjct: 257  KPVDERLLEIRKIEFEVGKYQAQQVEMETKH-KNCKEQINTISKKIKTLFE------GSL 309

Query: 188  AEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLEREKNDMDTKIKFLEQNIDAYTAEI 244
            AE     D E++N+      I  +R   E  +SKL + + D+            A T++ 
Sbjct: 310  AE----LDLEIRNFDQRMSEIKYQRSDFEEQLSKLTQSEGDLQK----------ALTSQE 355

Query: 245  TNLLSEAGAHMSRMNERDSTIQKL--FARHNL----GSLPNAPFSNEAALNFINRI---- 294
               L       S    +   +++L   ++  L    G L   P      L  I  +    
Sbjct: 356  KKRLLAQQQQQSEQTCKAELVKRLKDLSQQLLIPIEGDLSKQPEKLSELLEDIEGVLLGK 415

Query: 295  RSRLSDLERDLEDKK------KSDELALKMA-WDSYLDANDRWKNIEAQKQAKMEIKAGI 347
            +  +++ E D  DK       K DEL ++++  +  + A ++ K +  ++   +E+K   
Sbjct: 416  QCEIAE-ESDRNDKADQGRQLKIDELRIELSKSEQQITAQEKQKVVSEKESGSLEVK--- 471

Query: 348  LKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSEL 407
            +K I+   ++    E QI+  +   + ER         R  NQ A R+    I  K+S +
Sbjct: 472  IKQIETSMHQLKLLEKQITEAD--EVYER-------TSRNFNQEACRQV---IADKKSSI 519

Query: 408  FAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRL 467
                ++ K L+++   L+  S+   ++ LK+ +LE   ++ +++ + + +      K   
Sbjct: 520  AEKQERFKKLDKQLTFLSSMSKLMAEINLKEKDLEKKTQEIQRVRNRHSENFSKFFKE-- 577

Query: 468  PLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKK 527
            P+  + +       R+L   +D L  + RE +++ N  ++K Q           D+   +
Sbjct: 578  PITNNYR-------RSLQNSYDSLRREIRELNEKANAQKLKEQSCEIKRKNIMSDISRME 630

Query: 528  RFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHV 587
            + ++   E + Q+  S   Y+++L+ +K      + ++        M+  + +       
Sbjct: 631  KELKEAEELIYQKCHST-PYEELLERSKANISKLQFEHGALTSAEAMYKKYIQKITEEPC 689

Query: 588  CPCCERPFSAEEEDEF-------VKK-----QRVKAASSAEHMKVLSLESSNADSYFQQL 635
            CP C    S +E  +        ++K     +R   A  AE +K            ++ L
Sbjct: 690  CPLCHHNMSGDEASDLSYELTDEIEKLPENIERASKALKAEQLK------------YENL 737

Query: 636  DKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLV 695
             ++R    +  +L K+TIP  ++ LH++ E L      ++ ++ ++A+   + E    ++
Sbjct: 738  LQIRPSITKVTEL-KKTIPEKKEELHKIEELLGDSVSEYETMMALIAEPTQNMELANSML 796

Query: 696  QPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
              +   D   +E    +++++  +  L        +ME +Q           N ++E+ K
Sbjct: 797  GDMSLLDEALKESVRVKRELEQAKSKLPDNYDSSVSMEALQ-----------NEKSEVSK 845

Query: 756  -LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA--------EEELEHLMEEKG 806
             L  E++ +E+   N         E++++A N LR+VK A        +E ++ L + K 
Sbjct: 846  ELDTERKTLESSQHNF--------EQQMEALNRLREVKNALKDKQIKLQEGVQSLPQLKD 897

Query: 807  QLD-LDEKLLA------EASGPLSKEKEKLLSD--------------YNDLKVKLNR-EY 844
            +LD L  +L+A      E    +   K+KL S                N L  KLN  + 
Sbjct: 898  RLDELTRQLVAITTEISELKSKIQPLKQKLASSIQEKSRLKEQDRAKLNQLTSKLNSYKS 957

Query: 845  EEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
             +Q  Q++N +      L IA+ IK++     D     ++E  ++ +SE+K    +T E 
Sbjct: 958  ADQDIQRLNTEALDYAKLDIANAIKKH-----DSSINAMKEDLTKLDSEIKG---KTKE- 1008

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFE 962
               L+  K    NQ  + R++ DN   ++ + K  K +   + L  ++  L  GGVS  +
Sbjct: 1009 ---LEAIKMKCANQQTVERDLRDNRELKQLQEKEVKLSENCKDLNRQLGNLDFGGVSKEK 1065

Query: 963  TELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
             EL K   +RD          G +    + + + + ++ + +YK+  K +     +L  T
Sbjct: 1066 QELAK---QRDAATVRKGELLGQLGEINSQVQKLQREINEPKYKESLKNYRKANFELHVT 1122

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS-DSEGAG 1081
              + +DL ++  AL+ AL++FH+ KME+IN++IRE W+  YRG DIDYI + + D +  G
Sbjct: 1123 RRSIEDLGQHRLALEWALIQFHSEKMEKINRLIREYWRMVYRGNDIDYIEVKTEDDKSKG 1182

Query: 1082 T-------------RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
                          +SY+Y+V+    + E+EMRGRCSAGQ+VLASLIIR+ALAETF  NC
Sbjct: 1183 IEDGKNKDTLADRRKSYNYRVIQSKNNNEIEMRGRCSAGQRVLASLIIRMALAETFSSNC 1242

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1188
             +LALDEPTTNLD  N  SL  AL+RI+++R+   NF LI+ITHDE F   +G+      
Sbjct: 1243 AVLALDEPTTNLDRVNIISLCDALNRIVDERESHANFMLIIITHDENFISSMGK---LST 1299

Query: 1189 YYRVAKDDHQHSII 1202
            Y+RV ++D   S+I
Sbjct: 1300 YHRVYRNDETKSVI 1313


>gi|431892676|gb|ELK03109.1| DNA repair protein RAD50 [Pteropus alecto]
          Length = 1267

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 293/1156 (25%), Positives = 574/1156 (49%), Gaps = 87/1156 (7%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE I+++ + Q Q++K  + +L+ L+  K+ A ++R  I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETIRQVRQTQGQKVKECQTELKYLKQNKEKACEIRNQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  +++  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228  ASKEDQLTSSKEIVKAYENELDPLKNRLKEIEQNLAKIMKLDNEIKALESRK----KQME 283

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEK 343

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344  SELLVEQGRLQLQADRHQENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRER 403

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      ++K  E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404  ----------QEKEAETANQLMNDFAEKETLKQKQIDEIRDKKIGLGRIIELKSEIL--- 450

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   NI   ++E+ +  
Sbjct: 451  SKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNSNIETLKTEVISLQ 508

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509  NEKADLDKTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELNSLL- 567

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVD 524
            G  P  + L+              D L SKS+E ++  + L  K+ +   +  +++  + 
Sbjct: 568  GYFPNKKQLE--------------DWLHSKSKEINQTRDRL-AKLNKELASAEQNKNHMS 612

Query: 525  SKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF--E 579
            ++ +  E +L S   ++F +     ++  LD  KE+ +    +  +  G   ++  F  +
Sbjct: 613  NELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQ 672

Query: 580  RVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKL 638
                    CP C+R F  E E  + +   + K   + + +K    E    +    ++  L
Sbjct: 673  LTDENQSCCPVCQRMFQTEAELQDVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 732

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
              + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +  +  V
Sbjct: 733  VPMRQGIIDLKEKEIPELRNKLQNVNRDMQRLKNDIEEQETLLGTIMPEEESAKQSLTDV 792

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEK 755
               +RL  E++  ++++      L    QG+   RT++++  E        D + +++E 
Sbjct: 793  TIMERLQMELKDVERKIAQQAAKL----QGLDLDRTVQQVNQEKQEKQHKLDTVSSKIEL 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLL 815
             R   +  +  + +++   + L+ EK++ +  L+  ++ EE+      E   L  + K  
Sbjct: 849  NRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVEFSTEVQSLYREIKDA 908

Query: 816  AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLR 875
             E   PL    EK   +  +L  K N   +   ++  + +++++ +      I+ Y    
Sbjct: 909  KEQISPLETTLEKFQQEKEELVYKKNTSNKITQDKINDIKEKVKNIHGYMKNIENYIQDG 968

Query: 876  KDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETK 935
            KD+  K+ + +  +  +++  C+ R ++I  E+   +  +  Q    R ++DNL  R+  
Sbjct: 969  KDDYKKQKETELDKVIAQLSECEKRKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRK-- 1026

Query: 936  AKVDKFASEIESLEERVLKIGGVSTFETELGKHLLE-------RDRLLSEVNRCQGTMSV 988
             + ++     E  E+ + ++G +   + +     LE       R+  L+ + R +G    
Sbjct: 1027 -RNEELKEVEEEREQHLKEMGQMQVLQMKNDHQKLEEKIENIKRNHSLA-IGRQKG---- 1080

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L+ +Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKM
Sbjct: 1081 YEEEIMHFKKELRDSQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM 1140

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSDSE-----GAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD++         R+Y+Y+V+M  GD  L+MRGR
Sbjct: 1141 EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVAASDKRRNYNYRVVMLKGDTALDMRGR 1200

Query: 1104 CSAGQKVLASLIIRLA 1119
            CSAGQK  +S I  L+
Sbjct: 1201 CSAGQKAESSPITGLS 1216


>gi|330919094|ref|XP_003298470.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1]
 gi|311328291|gb|EFQ93424.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1]
          Length = 1306

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 205/650 (31%), Positives = 337/650 (51%), Gaps = 48/650 (7%)

Query: 582  ARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV 641
            A  H++C  C R    +E+++F     +K           ++++ NAD  F +L+  R  
Sbjct: 677  AEKHNICRLCTRSLHDDEDEDFTTAGFIKKLKDIIAKAKNTMQADNADEIFAELEAARNA 736

Query: 642  ---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
               YE   +L +  +P  +K +  LT E D  ++  +D   V+  ++A+K+ VE L + V
Sbjct: 737  KPSYELATRLRQNELPDIQKTITNLTSERDSLNKQLEDQDEVIHDLEAEKQEVEALSKEV 796

Query: 699  ETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELS----GSLSTKDNLQNELE 754
            ++    +  +Q  Q ++ +L     S G   R ++ IQ +LS     S S +  L ++L 
Sbjct: 797  QSIVSYYNRVQELQVEIKELAQKQKSAGLS-RGIDAIQSDLSQVSDDSRSARTTL-DQLI 854

Query: 755  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKL 814
              RD+ R   N ++++++    +  E   A + L++ +   E +E    E        + 
Sbjct: 855  AARDKAR---NLITSLELSVRDINAELHNAQSKLKEKRALAERIEEFKRENNNQREAIRS 911

Query: 815  LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDL 874
            L +    ++ E E+    Y+D+  + N   +   ++     + +  L K   +I  Y   
Sbjct: 912  LDQDMDNINPEIEQAQYKYDDINRRGNDRVQRTHDEASKLSESLRQLEKANEEINAYISR 971

Query: 875  RKDERFKELQEKKSQSESEVKSCKIRTD--EILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
                + ++        + E+   +I TD   +  ++ + +D +R+ D  RR+I +NL YR
Sbjct: 972  GGPRQLEQTHRDIENLQGEI--ARIETDMMNLTRKIKKLEDTMRDTDMSRRSITENLRYR 1029

Query: 933  ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTN 992
            + K  ++    EIE LE      G              ERD+   E       +   Q N
Sbjct: 1030 KAKRSLESLRMEIEKLEAE----GA-------------ERDKEHYEREAEHWDLKYRQLN 1072

Query: 993  ISRNKI--DLKQAQ-------------YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALD 1037
            I +  +  D+K                YKD  +++ +  I+++TT+ A +DL RY  ALD
Sbjct: 1073 IDKTGVERDMKNKDDQLTELMEEYNNLYKDSAQQYREAHIKVETTKAAIEDLGRYAGALD 1132

Query: 1038 KALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAE 1097
            KA+M++HT+KMEEIN+I+ ELW+  Y+G D+D IRI SD +G G R Y+Y+V+M   D E
Sbjct: 1133 KAIMKYHTLKMEEINRILAELWRNAYQGTDVDTIRIASDGDGKGNRVYNYRVVMVKQDTE 1192

Query: 1098 LEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIME 1157
            ++MRGRCSAGQKVLAS++IRLALAE F  NCG++ALDEPTTNLD  N + LA +L +I++
Sbjct: 1193 MDMRGRCSAGQKVLASIVIRLALAECFGTNCGLIALDEPTTNLDQQNIKGLAESLSQIIQ 1252

Query: 1158 DRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             R+ Q NFQL+VITHDE+F + +    + + Y+RV +D  Q S IE Q I
Sbjct: 1253 TRRKQANFQLLVITHDEQFLREMNCADYTDVYWRVGRDVKQESFIERQNI 1302


>gi|320168353|gb|EFW45252.1| zinc ion binding protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1396

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 229/703 (32%), Positives = 359/703 (51%), Gaps = 80/703 (11%)

Query: 559  DVQKSK----YNIADGMRQMFDPFERVARAHHVCPCCERPFS-----------------A 597
            D QKSK        D    M+  F + A   H CP CER F                   
Sbjct: 716  DRQKSKTVSVLATLDAAELMYSSFIKKAEQSHACPLCERAFGHGGHAAAASSSSSSRSSL 775

Query: 598  EEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAE 657
            +E D+F++  + K +        L+ + +   +  Q+LD LR +  +  +L ++T+P  E
Sbjct: 776  DEFDKFMQTYKNKLSVIPGRKANLATQLNELQALLQRLDTLRPLSTQLTELVEKTLPRLE 835

Query: 658  KNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF---QEIQLWQKQ 714
             ++ +     +      DD+   +A+    KESV++  Q    A  L     +++    +
Sbjct: 836  SSIEDAAAVCEVLGANVDDLAASVAE---QKESVDLANQLRADAAALARLSSDVRALDNE 892

Query: 715  VDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRW 774
            +   E  L S G   R+ +++  E       + +L  ELE LR     +  D+       
Sbjct: 893  IAAQERTLQSTGGSGRSRDQVSEE-------RKSLAAELEMLRRSVSQLTRDIR------ 939

Query: 775  HTLREEKVKAA-NTLRDVKKA-EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
               +E+ V A  N L +V K     +  L E K +  + E+L+A A+  L +E E +   
Sbjct: 940  --AKEDAVNAERNRLFEVTKTLASRVSQLEEAKRRFSVHEELVA-AARVLGEELETIQLQ 996

Query: 833  YNDLKVKLN-----REYEEQAEQKIN--FQQEIEMLLKIASKIK--EYYDLRKDERFKEL 883
            +   + +L      RE  E A +  N  ++ E   L + +   K  E   +    +  E+
Sbjct: 997  HKPAEERLRTALDARETSENALKSANVRWRDETATLTRDSDAFKTLEAASMMLAGKEAEV 1056

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQ---IRRNIEDNLNYRETKAKVDK 940
                +      +S   +  ++    ++   I R  D+   +RRN++DN+++R  K +V +
Sbjct: 1057 ARLAASKAHASRSMADKEQQVTTLQEKVASIRRQVDREQSVRRNLQDNISFRRKKIEVQQ 1116

Query: 941  FASEIESLEERVLKIGGVSTFETELGKHLLERD---RLLSEVNRC--------QGTMSVY 989
               E+ ++++  LK   V    TE     + RD   +L SE  R         + T +  
Sbjct: 1117 CDEEMANIDDE-LKQMNVGILATE---KQVPRDTQRQLQSEARRFLRAKLEGQRATWAEQ 1172

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
               I+R   +L+   Y ++D R   QLI +KTT+MAN DL++Y+ ALDKA+M++H MKM+
Sbjct: 1173 DKGITR---ELQTPLYNNVDDRFRKQLITVKTTKMANHDLEQYHKALDKAVMKYHAMKMQ 1229

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRC 1104
            EIN+IIRELW  TY+G DID I I SD     ++ +G +SY+Y+V+M  G+ E+++RGRC
Sbjct: 1230 EINEIIRELWANTYKGADIDAIEIRSDVDEEETQASGRKSYNYRVVMVKGEMEMDIRGRC 1289

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            SAGQKVLA LIIR+AL+ETFCLNCGILALDEPTTNLD  N +SLA AL +++E R+ Q N
Sbjct: 1290 SAGQKVLACLIIRMALSETFCLNCGILALDEPTTNLDKDNIDSLAHALAKLVESRRAQHN 1349

Query: 1165 FQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            FQL+VITHDE F   +G+ +  + Y+RV KD +Q S I  Q+ 
Sbjct: 1350 FQLLVITHDEDFVAQLGRSETIQTYFRVEKDFNQTSRIIPQQF 1392



 Score =  142 bits (359), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 58/307 (18%)

Query: 4   KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN------ 57
           K IES L TI+P TGEK  +S +CADMDR +P  +GVSKA+LENVIF HQ+E N      
Sbjct: 111 KTIESTLLTIDPVTGEKQSISSKCADMDRLIPIELGVSKAVLENVIFCHQEEQNAFGIFS 170

Query: 58  -----W---PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQT 109
                W   PL +P  LK+KFDDIF+ATRY KALE IKK   +Q ++++   ++LE+L+ 
Sbjct: 171 HSMNSWLFRPLSEPKKLKEKFDDIFAATRYIKALENIKKFRDEQVKDVREKVIELEHLEK 230

Query: 110 LKDAAYKLRESISQDQEK---TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQI 166
            +DAA          QEK    ++++ QMQ  +++I  ID K+      +  L     + 
Sbjct: 231 CRDAA----------QEKRRLQQSVRAQMQAADEAITGIDAKLEPINKLIAGLDTQMAKF 280

Query: 167 STMTARRSTLFEQQQKQYAALAE-------EIEDTDEELKNWKNNF-----EGIVAKRES 214
           + +   R+     + +    LAE       E+ +TD EL   +  F     +    +RE+
Sbjct: 281 NALQQDRAAAESAKDQLVKNLAEIKGGMTNELTETDAELAQMEKRFDEQFRQAAAQRREA 340

Query: 215 DISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG-------AHMSRMNERDSTIQK 267
           +  + +++ ND           ++A  AE   LL++ G       A  +R+ ERD+ IQ 
Sbjct: 341 E--QQQKQANDA----------LEALRAEFNRLLTQGGRAESELDALSNRVKERDALIQT 388

Query: 268 LFARHNL 274
           L  ++ +
Sbjct: 389 LANKYRI 395


>gi|170035857|ref|XP_001845783.1| DNA repair protein RAD50 [Culex quinquefasciatus]
 gi|167878307|gb|EDS41690.1| DNA repair protein RAD50 [Culex quinquefasciatus]
          Length = 1292

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 316/1232 (25%), Positives = 594/1232 (48%), Gaps = 118/1232 (9%)

Query: 3    YKAIESVLQTINPHTGEKVCLSY-RCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            ++ ++S +   +  TGEK  LS  R AD++ ++   MGVSKAI+ NVIF HQ+++NWPL+
Sbjct: 114  FETLDSAVTIEDGATGEKKTLSRPRVADINNDMADAMGVSKAIINNVIFCHQEDSNWPLE 173

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHK--DQAQEIKTYKLKLENLQTLKDAAYKLRE 119
            +P  LKKKFD IF  T Y K +E + K+ K  +  Q+ K   LKL  L+ +K  A   + 
Sbjct: 174  EPKELKKKFDAIFETTEYNKVIEKLIKISKEYNDRQKEKAGDLKL--LENIKSQAEMKQL 231

Query: 120  SISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQ 179
               + + K   ++ ++  LE S++ I +++       +D  K++ Q     ++  T  +Q
Sbjct: 232  QAEKAERKKGEMRKEVDGLEGSLKPIHERMEQIARIERDYSKLKQQEIEFKSKIHTKEDQ 291

Query: 180  QQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDA 239
            Q    + +      +  EL+    +F+  +  + S++   E +     ++ K L+  +  
Sbjct: 292  QNNLRSKIRTLFSGSLAELEQEIRSFQESMGGKRSELRDAESDLASRKSQEKSLQSKLQE 351

Query: 240  YTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNL---GSLPNAPFSNEAALNFI-NRIR 295
              +   +L+++         +R   I +L  R  L   G    +    E+AL  I + IR
Sbjct: 352  MESRRVHLIAKRQQEQDLGGDRAGKIVELCGRLKLPASGDYEGSAVDVESALAAIKHGIR 411

Query: 296  SRLSDLERDLEDKKKSDELALKMAWD------SYLDANDRWKNI--------EAQKQ--- 338
            S  S ++   +   ++D+ A K A D      + L+++ R K          +A+ Q   
Sbjct: 412  SEESQVQAMAKGHDEADQAAQK-AIDRLREDKAKLESDVRMKGQMVADFAREKAKTQTEI 470

Query: 339  AKMEIKAGILKHI-KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFE 397
            A +E  A  LK I  E E     +E Q +N N+  +       R  VE+K    A+RE  
Sbjct: 471  AAIERSAETLKKIVGEIEKLEREYETQKANSNVDGMK------RTLVEKK----AKRE-- 518

Query: 398  INIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKD 457
                + Q +L  ++++I AL    D +A  +    +L LK+ +L   + + +++ +++ D
Sbjct: 519  ----ELQVKLDKVEEQISAL----DAIAAKA---TELGLKEQQLNGREAEFRRVRNKHSD 567

Query: 458  KIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS 517
             ++     RL   + ++    +A++ L   +D L  + ++ ++     Q  + E+     
Sbjct: 568  NLK-----RLFPSKTIESNFKRAVQDL---YDGLQRQIKQLNESTRAAQAIVTEMETTRR 619

Query: 518  KHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIADGMRQM 574
              ++D+D     +E +L    ++I++      Y++VL   KEK     ++ N+  G ++ 
Sbjct: 620  SQKRDLDR----LERELTENREKIYAACQGQPYEEVLSKLKEK----ITRNNLEHGEQRS 671

Query: 575  FDPFER--VARAH--HVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADS 630
             +   R  ++R      CP C +  +  +  +   +   +     E +++L  +  +  +
Sbjct: 672  AEILYRKYISRIEDDSCCPLCHKEMAGSDAQDISTELSDEIRRLPEKIEMLEKQLKSDQT 731

Query: 631  YFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKES 690
             + +L  L+  Y E V+     IP  ++ L E  + L Q S   ++    + +  +    
Sbjct: 732  RYDRLLALQ-PYSERVEKQTIEIPKLKQQLQETEQRLTQASSDLEEYQMAVLEPNSSVAL 790

Query: 691  VEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQ 750
            +  +   +   D   +++   +K V +L   L  +  G            GS  + D+++
Sbjct: 791  INSIHGDMSILDESARDLHRMRKGVAELRQELADKTPG-----------GGSAVSLDDMK 839

Query: 751  NELEKLRDEQRYMEND--------------LSNIQIRWHTLREEKVKAANTLR--DVKKA 794
             E E LR E R   N               L+ +  R++ ++E+K++   +++  D KKA
Sbjct: 840  LEREVLRGELRAERNSIDEMQNRIDLETERLNGLHQRFNQMKEKKIQLQESVQSLDTKKA 899

Query: 795  EE-EL-EHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKI 852
            +E EL E ++  K +++  E+ L      L+KE+E  +    + +VKL +     A+ ++
Sbjct: 900  KEVELGEKIVACKSEMEDAERRLGPVRASLAKEEEAKVKAKGENRVKLGK-----AQSEL 954

Query: 853  NFQQEIEM-LLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRF 911
               + +E  ++++  ++ +   L   +   +++ K  +   ++K      +E   ++D  
Sbjct: 955  EGLKRMEGEIVRLGRELDQLARLNLTDEIAKMKRKLQEVTDDIKKVAASIEEKSTKIDTL 1014

Query: 912  KDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLE 971
            K  + NQD I R+  DN + ++  A+      ++++L   +  +   +  + E  K L +
Sbjct: 1015 KKEISNQDLIERDFLDNRDLKKLTAETAVLQEKLDTLLRSIGDLDAPNVVQ-ERNKLLEQ 1073

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDR 1031
            RD + ++ +   G ++  +  +   + +L + ++++          +    +    D+ +
Sbjct: 1074 RDSIQAKRSEITGQIAELENQLKALRKELDRPEFRNAVANFHKTFAESVVLKKIISDILK 1133

Query: 1032 YYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT------RSY 1085
            Y NAL+ ALM++H  KME+IN+ I  LW+  YRG DIDYIRI ++ E   T      R Y
Sbjct: 1134 YRNALEWALMKYHAEKMEQINRSIYSLWRDIYRGNDIDYIRIKTEDESRETKAVEKRRQY 1193

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+    D E++MRGRCSAGQKVLASLIIR+ALAETF  NCG++ALDEPTTNLD  N 
Sbjct: 1194 NYRVVQAKNDVEIDMRGRCSAGQKVLASLIIRMALAETFSNNCGVMALDEPTTNLDRENI 1253

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
             SL  +L RI+ +R+G  NF LI+ITHDE F 
Sbjct: 1254 ASLCESLRRIVTEREGG-NFLLIIITHDEEFV 1284


>gi|225682548|gb|EEH20832.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb03]
          Length = 1292

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 344/1245 (27%), Positives = 568/1245 (45%), Gaps = 167/1245 (13%)

Query: 18   GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
            GE+  +S R A++D+ +P  +GVSKAIL++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 124  GERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 183

Query: 78   RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
            +YTKA++ IK L K Q +E+  YK+  ++ +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 184  KYTKAIDNIKALRKKQNEELAKYKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHE 243

Query: 138  LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ--QKQYAALAE---EIE 192
            L K ++         EL  K  ++ +  +  +        E +  Q   + L +   E++
Sbjct: 244  LSKEMR------RAAELADKAWKESESYVQILGTLEGKRIEAKSIQTSISNLQQHLVEVD 297

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKND-MDTKIKFLEQNIDAYTAEITNLLSEA 251
            ++DE L+     FE   A+        +RE+ + +  K   L Q I+   A++    +E 
Sbjct: 298  ESDEWLERALEQFESKQAQ--------DREQEESLKQKYVDLRQLIEDNRAKLGLKQAEY 349

Query: 252  GAH------MSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDL 305
            G H        R  +R   + K  AR N     +    +    +F+ RIR +LS      
Sbjct: 350  GKHENDKAQFERQLKRQENLIKEIARQNSIRGFDDDLDDMQVNDFMQRIR-KLS------ 402

Query: 306  EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
            +D+ ++ E A + A     +A      +  +K A  E+K    K I   ++E DS++ ++
Sbjct: 403  KDQNQALERARREAQVEQREAQSLLNQLGQRKSALQEVKNAARKQITSNDHEADSYQRRL 462

Query: 366  SNLNLSHIDERENKMRIE-VERKTNQLAER----EFEINIRQKQSELFAMDQKIKALNRE 420
              + +   D+   + RIE  ER  N+   +     ++  I+   +E+  ++ +   LN E
Sbjct: 463  DEIEIDEGDKAVLESRIEETERSLNEAKGKAKAASWDSAIQSTTAEIRLLEDESSKLNAE 522

Query: 421  ---KDVLAGDSE--DRVKLALKKAE--LENHKKKHKKIIDEYKDKIRDVLKGRLP--LDR 471
                   AGD    D +K  LK  E  LE  K  H + I ++      V +   P  LD+
Sbjct: 523  LIEGTKRAGDLARLDHLKRELKDRERSLETMKGAHAERIKKF------VTQEWSPSTLDQ 576

Query: 472  DLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE 531
            + +  +  A  AL     +   K RE    +     K++    +L + R ++   K+ IE
Sbjct: 577  EYQTALEAATNALTHVERERDGKCRE----LEHTDFKLKTTRKDLLQKRNEL---KQCIE 629

Query: 532  SKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCC 591
               +S+N +    + Y  +L   + + D+ K   +   G+          AR   VC  C
Sbjct: 630  KIRDSVNDEP---EEYPDILKQRQVQLDMAKKDADQYAGLGDYLSKCMDAARQKKVCRMC 686

Query: 592  ERPFSAEEE--------DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
             RPF  E E        D  VK+    AA  +       LE++ + S F         Y 
Sbjct: 687  SRPFKTEGEFQIFLNKLDALVKRATQDAADESLRQLEEDLEAAQSASTF---------YG 737

Query: 644  EYVKLSKETIPVAEK---NLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
             +V+LS   IP  EK    L    E+L  + +  D ++   A++K D   VE L + V T
Sbjct: 738  SWVRLSNTEIPALEKEEAKLESQREDLLSQIEDHDKIVSKRAELKKD---VESLSKTVAT 794

Query: 701  ADRLFQEIQLWQKQVDDL-----EYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
              +   EI + + Q+ +L     ++M        RT+E+IQ++LS        LQ  + K
Sbjct: 795  ISKYDSEIGMLRSQIQELGTNQQDFM------SSRTLEDIQVQLSEIGEKSRELQKVISK 848

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAE-----EELEHLME------E 804
            L  E+     +++ ++++   +R     A + L   KKA      EE  +L        E
Sbjct: 849  LSSEKDQSRTEITTLELKLRDVRSNLGNANHQLE--KKANLIARVEEYRNLNAKQRESIE 906

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKI 864
            K   D+D  L+ E S        K  + Y+D+  +  R  +E  ++       +  L   
Sbjct: 907  KADRDID-NLVPEVS--------KAQARYDDISSRAERREKELQQEASQLSDSLHQLNLA 957

Query: 865  ASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRN 924
              +I  Y +     +    +++    E E+ + +     I  E++     +++ +  +R 
Sbjct: 958  NEEITSYIERDGPAQLSRCEKEVCSIEMEIANLEKEQGSITKEINEISSRLKDSESTKRQ 1017

Query: 925  IEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQG 984
              DNL YR+  A ++   + IE L  +  ++   S F+ E  +   E + L ++     G
Sbjct: 1018 YADNLRYRQETAALEDVNTTIEELTAQNAEVDR-SRFKEESERRTREHNALSAKQASKMG 1076

Query: 985  TMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFH 1044
             M      + +   D     YKD   +  +  I+++TT+ A  DL RY +ALDKA+M++H
Sbjct: 1077 EMKSKDDQLMQLLADW-NTDYKDAGPKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYH 1135

Query: 1045 TMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGD--AELEMRG 1102
            ++KME                                            GD   +++MRG
Sbjct: 1136 SLKME--------------------------------------------GDQPCKMDMRG 1151

Query: 1103 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQ 1162
            RCSAGQKVL +L  RLALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q
Sbjct: 1152 RCSAGQKVLLALSSRLALAECFGVNCGLIALDEPTTNLDRDNISSLAESLHDIIRSRQQQ 1211

Query: 1163 ENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             NFQLIVITHDE F + +     ++ YYRV++++ Q SIIE Q I
Sbjct: 1212 SNFQLIVITHDEEFLRHMKCGDFSDYYYRVSRNERQKSIIERQSI 1256


>gi|345326936|ref|XP_001508900.2| PREDICTED: DNA repair protein RAD50 [Ornithorhynchus anatinus]
          Length = 1279

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 289/1140 (25%), Positives = 557/1140 (48%), Gaps = 73/1140 (6%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E V+ T + H G+KV +S +C ++D+E+ +  GVSK++L NVIF HQ+++NWPL 
Sbjct: 110  EFKTLEGVI-TRSKH-GDKVSISSKCTEIDQEMISSFGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q+  +K  + +L+ L+  K+ A ++++ I
Sbjct: 168  EGKALKQKFDEIFSATRYIKALETLRQVRQTQSGRVKECQTELKYLKQNKEKACEIQDQI 227

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K+ ++  E  +  + +++   E  L  + K+ ++I  + +R+  + +   
Sbjct: 228  ASKEAQLTSSKDIVKTYENDLDPLKNRLKEIEQNLSKILKLDNEIKALESRKKQMEKDNS 287

Query: 182  KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
            +    + +  + TD++L +  +N +  V ++E  +   +RE + ++ + + L Q      
Sbjct: 288  ELKQKMEKVFQGTDDQLNDLYHNHQRTVREKERRLIDCQRELDRVNKESRMLNQEKSELL 347

Query: 242  AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
             E   L  +A  H   +  RDS IQ L  +  L     APF+     +F   ++      
Sbjct: 348  VEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGYERAPFTERQINSFHKLVK------ 401

Query: 302  ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHIKEKE 355
            ER   D K ++++   +     +    + K IE  +  K      +E+KA I +  K+ E
Sbjct: 402  ERQERDAKTTNQVMNDLIGKETM----KQKQIEEIRDKKTGLERVIELKAEI-QSKKQTE 456

Query: 356  NERDSFELQ---ISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQ 412
             +   +ELQ    S+  +  +D    K   E+ +          ++ +   Q E   +D+
Sbjct: 457  LKNVKYELQQLEGSSDRILELDRELGKAERELGKAEKNSTVEALKVEVSDLQGERVDLDR 516

Query: 413  KIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRD 472
             ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++   L G  P  + 
Sbjct: 517  VLRKLDQEMEQLNMHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDEL-TTLMGYFPNKKQ 575

Query: 473  LKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL---SKHRKDVDSKKRF 529
            L+              D L  K+    KE+N  + K+ +    L    +++  + S+ R 
Sbjct: 576  LE--------------DWLHCKT----KEINQTRDKLAQFNKELVSAEQNKNHISSELRQ 617

Query: 530  IESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARA 584
             E +L S  +++F +   Q    D  K K +++KS    A   G   ++  F  +     
Sbjct: 618  KEEQLNSYEERLFDVCGSQDFESDLVKLKEEIEKSAKQRAMLAGATAVYSQFITQLKDEK 677

Query: 585  HHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
               CP C+R F  E E  + +     K   + + +K    +    +     +  L+ + +
Sbjct: 678  QSCCPVCQRVFQTEAELRDVISDLESKLRLAPDKLKSTESDLKRKEKRRDDMVGLKPIRQ 737

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADR 703
              V+L ++ IP     L  L  ++ +     ++   VL  +  ++ES +  +  +   +R
Sbjct: 738  HIVELKEKEIPELRNKLQTLNRDIQRLKCDVEEQETVLCTVMPEEESAKACLTDITIMER 797

Query: 704  LFQEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQ 760
            +  E++  ++++      L    QGV   RT++++  E        D + +++E  R   
Sbjct: 798  VQMELRDVERKIAQQAAKL----QGVDLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLI 853

Query: 761  RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG 820
            +  +  +  ++   + L+ EK++ ++ L+  ++ EE+   L  E   L  + K   E   
Sbjct: 854  QDQQEQIQGLKSTVNDLKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIKDAKEQLF 913

Query: 821  PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERF 880
            PL    +KL  +  +L  K N    + A+ K+N  Q  E +  I S +K   D  +D + 
Sbjct: 914  PLEATLDKLRQEKEELIDKKNTN-SKIAQDKLNDIQ--EKIKNIHSHVKNIEDYIQDGKE 970

Query: 881  KELQEKKSQ---SESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAK 937
               Q+K+S+     +++  C+ + ++I  E+   +  +  Q    R ++DNL  R+   +
Sbjct: 971  NYKQQKESELNKVATQINECEKQKEKINNEMGTMRQDIDTQKIQERWLQDNLTLRKRNEE 1030

Query: 938  VDKFASEIESLEERVLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNISR 995
            + +   E + L +   ++G +   + +     LE   + L   ++   G    Y+  I  
Sbjct: 1031 LKEVEEERKQLSK---EMGQMQVLQLKTEHQKLEEKIETLKRNLSVALGRQKGYEEEIIH 1087

Query: 996  NKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKII 1055
             K +L+  Q++D +++H + +I ++TTE+ NKDLD YY  LD+A+M+FH+MKMEEINKII
Sbjct: 1088 FKKELRDPQFRDAEEKHREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKII 1147

Query: 1056 RELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKV 1110
            R+LW+ TYRGQDI+YI I SD     S     RSY+Y+V+M  GD  L+MRGRCSAGQK+
Sbjct: 1148 RDLWRTTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQKI 1207


>gi|332026926|gb|EGI67027.1| DNA repair protein RAD50 [Acromyrmex echinatior]
          Length = 1520

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 323/1247 (25%), Positives = 598/1247 (47%), Gaps = 146/1247 (11%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K ++S +   +    +K  ++ +CA++D E+   +GVS++IL  VIF HQDE NWP   
Sbjct: 110  FKTLDSTVTKTSKDKKQKDSITNKCANVDAEIGIALGVSRSILNYVIFCHQDELNWPFDQ 169

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK++FD+IF + R+ KALE I KL K+   +I+T   + E  + L          +S
Sbjct: 170  GKLLKERFDEIFDSARFNKALETISKLQKELQSDIRTLNAEKETYKVL----------VS 219

Query: 123  QDQEKTEALKNQMQELEKS---IQDIDDKIHHTELTLKDLRKMQDQ---ISTMTARRSTL 176
            + Q+K   LK Q + L+ +   + DID ++   +  L++++K   +   I T   ++   
Sbjct: 220  EVQDKETKLKEQKKRLDTTKEKMNDIDKQLEPVKQKLEEIQKFHSEYKNIQTEEEKKKME 279

Query: 177  FEQQQKQYAALAEEI----EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
            F+  + +Y  L + I    E T EEL     +++ I+ ++  +I++ E E  D+  K   
Sbjct: 280  FDMHKDRYEKLKKSIRNIYEGTTEELNALIESYDTILTEKNVEIAENEAEIKDISRKETR 339

Query: 233  LEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
            +   +      +  L  +   +  R+  R+  +       N  ++  +  S         
Sbjct: 340  ISNILATRRETVGTLKQQVKDNERRVIRRNQLLNDALQAWNFDTV-ESDVSEIEVKALTK 398

Query: 293  RIRSRLSDLERDLEDKK---KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILK 349
            R+  ++  LE+ +E+ +   + +E  L+   D  L +N  +  IE++K         ILK
Sbjct: 399  RLEEKMRALEKQVEENRLDMQREEKELQREVD-MLRSN--YSKIESEK---------ILK 446

Query: 350  HIKEKENERDSFELQISNLNLSHIDERENKMR-IEVERKT---------NQLAEREFEIN 399
              KE  + RD  E+ I    ++ I    NK++ IE ERKT         N +     E+ 
Sbjct: 447  E-KEITDIRD--EIDIIRNEITQIGAAGNKLKSIEQERKTEKQKIDELVNAVNVDSLEVE 503

Query: 400  IRQK-------QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKII 452
               K       ++ L ++D +I +L++   ++A     +  L  K+ EL+N K+KH    
Sbjct: 504  KANKVKSKHKIEASLSSIDDEIFSLHKLSSLMAELEIRKSALQAKEEELKNLKRKHG--- 560

Query: 453  DEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEV 512
                D I+ +L  +      LK  + +  + L  E + L+ + +  +++    +  ++ +
Sbjct: 561  ----DSIKVLLNIQELEQTKLKDTLERVHQKLEKETNSLTREIQAQERKTTAFETTVRHI 616

Query: 513  TDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQK----VLDSAKEKRDVQKSKYNIA 568
                     + D KK+ IE  L +  ++I ++  Y++    +L  +   +D+Q  +   A
Sbjct: 617  ---------ESDIKKKTIE--LHNNKEKISAVCDYKEFDETLLMQSTIVKDLQDKRGIYA 665

Query: 569  DGMRQMFDPFERVARAHHVCPCCERPFSA---------EEEDEFVKKQRVKAASSAEHMK 619
                   +  ++++  +  CP C R F           E E + +  Q  +  S  + +K
Sbjct: 666  YQATAYKEYVKKLSVKNPCCPLCHRNFEKQNNVTDLIKEIESDIIHNQPGRLKSCEQELK 725

Query: 620  VLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLG 679
            +   +    D+  Q    L+ + E+ ++  +  + + E+ L +    + Q   A  ++  
Sbjct: 726  I---QQEKYDNMLQ----LKPIIEKVIQCEENDLKILEEKLKKTQNNVAQSKMAVKNLEA 778

Query: 680  VLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQLE 738
               + +      + ++  ++  DR   EIQ  +  V++LE  + + G +  RTMEE Q +
Sbjct: 779  SKTEPEKKLLLYKNMIGDIKFWDRCIDEIQQLKGAVNNLETQMANSGIKTERTMEEAQAQ 838

Query: 739  -------LSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDV 791
                   L  + +  D LQ +L K  ++       L N + +++ L E+++K  + +   
Sbjct: 839  REFLRKSLRETCNHIDALQLKLTKHNEK-------LQNARAKYNELHEKELKIQSDM--- 888

Query: 792  KKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQK 851
                ++L+HL +++G L   E  + E         EKL  D    + +L+   ++  + K
Sbjct: 889  ----QKLKHLKDKQGDLYTREITVGETV-------EKLQKDLTHAESELDSRSQQLEKTK 937

Query: 852  I-NFQQEIEMLLKIASKIKEYYDLRK--DE--RF--KELQEKKSQSESEVKSCKIRTDEI 904
            + N+Q++      ++   +   DL K  DE   F    + EK +  E E+++      E+
Sbjct: 938  VKNWQKQEADRKSMSESARRLSDLHKILDEINSFISSNVLEKLASYEREIETYNNSLTEL 997

Query: 905  L-----VE--LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGG 957
            +     VE  + + K+ + +Q+  +R + DN++ R+ K  ++    + + L E   K+  
Sbjct: 998  MNKKNDVEQTVSKLKEDIASQEIGKRELLDNMSLRKIKETLETLKEQYKKLNE---KLKN 1054

Query: 958  VSTFETELGKHLLERDR--LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQ 1015
            +   E       LE D+  LL + N   GT    +  I +   +L++ +Y+   + + ++
Sbjct: 1055 MDYKEMMKKWEQLENDKQALLRQRNVALGTQEELERIIKQYTQELRKEEYRLARRNYTNK 1114

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI-- 1073
             I+L   E    +L  Y   LDKA++ +H  +M  +NKI+++LW+  Y+G D   I I  
Sbjct: 1115 CIELTVQEDTIANLKAYNKILDKAMIEYHEERMLTVNKIMKKLWKHVYKGTDTSSIEICT 1174

Query: 1074 -HSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILA 1132
              +D  G+  RSY+YK++      +++M+GRCSAGQKVLAS+IIRLALAETFC NCGILA
Sbjct: 1175 EPTDGVGSNRRSYNYKLIQTKHGCKMDMKGRCSAGQKVLASIIIRLALAETFCKNCGILA 1234

Query: 1133 LDEPTTNLDGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQ 1178
            LDEPTTNLD  NA SLA  L +++E R K Q+NFQLI+I+HDE+F Q
Sbjct: 1235 LDEPTTNLDEDNANSLADMLTKVVELRSKYQKNFQLIIISHDEKFLQ 1281


>gi|452821102|gb|EME28136.1| DNA repair protein RAD5 [Galdieria sulphuraria]
          Length = 1320

 Score =  275 bits (704), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 154/373 (41%), Positives = 236/373 (63%), Gaps = 12/373 (3%)

Query: 843  EYEEQAEQKINFQQEIEMLLKIASK-IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT 901
            +++E    +IN+ ++ +  L++ S+ +   Y    D+  + L+ ++     E++ CK   
Sbjct: 948  QWKETCSAEINWARDSKKALEVLSEEMNRLYGNCSDDLLQRLEREEETLHQEIQKCKKEI 1007

Query: 902  DEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTF 961
             E+     +    +   +   +NIE N N+R+TKA ++    ++  L+  + ++      
Sbjct: 1008 SELEESTQKSTSKIYELNSTLKNIEANRNFRKTKAIINDMEKKMNQLQREMTELQQ---- 1063

Query: 962  ETELGKHLLERDRLLS----EVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLI 1017
             T+L   L ++DR +     + +   G   +    +   K ++ +AQ    ++ + ++L+
Sbjct: 1064 GTDLVAALNDKDRGIQIRRDKSSSLAGKKEMIDDRMKELKKEIHKAQSTRSNEMYREKLV 1123

Query: 1018 QLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS 1077
            +LKT +++ KDL++Y+NALD++LM FHT+KM+EINK+++ELWQ TYRG+DIDYI I SDS
Sbjct: 1124 ELKTLDLSLKDLEQYHNALDRSLMTFHTLKMKEINKVVKELWQATYRGKDIDYIEIVSDS 1183

Query: 1078 E---GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1134
            E       RSY+Y+VLM  GDA LEMRGRCSAGQK+LASL+IRLALAE+FCL CGILALD
Sbjct: 1184 EMDQSGSKRSYNYRVLMHRGDASLEMRGRCSAGQKILASLVIRLALAESFCLECGILALD 1243

Query: 1135 EPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            EPTTNLD  N ESLA AL  I+  R+ QENFQLI+ITHDE F +L+G R+  + YY V +
Sbjct: 1244 EPTTNLDKENIESLANALSDIIRARRIQENFQLILITHDEHFIELLGSREVTDTYYLVER 1303

Query: 1195 DDHQHSIIEAQEI 1207
            D+   S I  Q++
Sbjct: 1304 DEDGFSHIRLQDL 1316


>gi|380028059|ref|XP_003697729.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Apis
            florea]
          Length = 1383

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 317/1279 (24%), Positives = 606/1279 (47%), Gaps = 154/1279 (12%)

Query: 1    MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
            + +K ++S L  +N  T E + ++ RC ++D E+   MGVSK IL+ VIF HQ++ NWP 
Sbjct: 109  VRFKTLDSALSRVNKDTKEVISITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPF 168

Query: 61   QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            QD   LK++FD+IF + ++ KALE I KL KD  Q +   K + +N Q   +        
Sbjct: 169  QDGKKLKERFDEIFDSAKFNKALESIMKLIKDLKQRVNILKEQKQNYQFTVNEVIDKETK 228

Query: 121  ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTE---LTLKDLRKMQDQISTMTARRSTLF 177
            +  ++++ E  K +++E  K ++ +  KI   E   +  KDL+  Q        R+   +
Sbjct: 229  LEDNKKRLENSKIKIEEFNKELEPVIQKIKKLEKIDVEYKDLQSEQ-------KRKKAEY 281

Query: 178  EQQQKQYAALAEEI----EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFL 233
            +  ++Q  +L E +    EDT E+L     +++  + K+ ++I + ++   D+  K   +
Sbjct: 282  DMFKQQLDSLKENLQNIFEDTTEKLLKEIESYDEELIKKINEIDEFKKSLRDIAEKESTI 341

Query: 234  EQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINR 293
               +        +L  +   H  ++  R+  + +  +  NL  + +   S    + F  R
Sbjct: 342  SNKLANERVTNGSLRQQIKDHEKKVILRNQILNESLSSWNLNVVDSNVVSELEIIAFTKR 401

Query: 294  IRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKH-IK 352
            ++ ++ +LE  LE+ K   E   K           +  +I   K +K++I+    ++ I 
Sbjct: 402  LQEKMRELEHKLEENKIKREEEEKEL--------QKIVDILRHKYSKLDIEKNFKENEII 453

Query: 353  EKENERDSFELQISNLNL--SHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAM 410
            E   E D  +L I  LN   + ++  E+K++ +V+ +  QL +    IN+   + E+   
Sbjct: 454  ETRKEIDKIKLDIMQLNAESNKLNFIESKLQ-KVQTRIQQLND---AINVDTMKKEI--- 506

Query: 411  DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKD------------- 457
              KIK +  E D L    ++ + L LK++ L+   + +K  +   +              
Sbjct: 507  ADKIK-IRDEMDTLLNTIDEEITLLLKQSSLQTELELNKSTLLIKEKEIEKLKKKHEEKI 565

Query: 458  ----KIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVT 513
                 I+D+ + +L  + D+        + L+ E + ++   R  + ++  L+  I  + 
Sbjct: 566  ISLLNIKDISQIKLKNNFDM------VQKELINEIESINQNIRTEEHQIATLETTISHIE 619

Query: 514  DNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIADGMR 572
              L   +K+++  K  I S        I S   + +V L  +K+ +D+Q  K        
Sbjct: 620  HELQNKKKEINLNKEKISS--------ICSYKNFDEVLLLQSKKVKDLQDKKGMYTHQSA 671

Query: 573  QMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYF 632
               +  +++   +  CP C R F              K  +    +K +  E  N  +  
Sbjct: 672  AYKEYIKQLRNTNPCCPLCHRGFD-------------KIETITTLLKEMETEIENHPNRL 718

Query: 633  QQLDK-LRMVYEEYVKLSKETIPVAEK--NLHEL-TEELDQKSQAFDDVLGVLAQIKADK 688
            ++ +K L++  E+Y K+  +  PV E+   L E+  E+L    + F + L      ++  
Sbjct: 719  KECEKELKVQQEKYDKML-QLKPVVERIIQLEEIELEKLTSNLEKFKNKLN-----ESQT 772

Query: 689  ESVEVLVQPVETADRLFQ------EIQLWQKQVDDL--------EYMLDSRGQGVRTMEE 734
             ++E+  Q + +  +L        ++ LW   +DD+        ++ +     G++T   
Sbjct: 773  TAIELKXQKIXSXKKLVMCKDIIGDVMLWDTYIDDIFKLKQIIDDFHIRMAAAGIKTKRS 832

Query: 735  IQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA 794
            +Q     + + ++ L+  L+K+R+    ++++++        +  EK+  A       + 
Sbjct: 833  LQ----EAQTEREELKISLKKIRENIERLQSEIN--------MHNEKLHNA-------QQ 873

Query: 795  EEELEHLMEEKGQLDL--------DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEE 846
            EE + H  + K QLD+        ++++L      L K  + L  +    + +LN   ++
Sbjct: 874  EENILHKEQLKIQLDMQKLKELKDNQEILYLKEISLGKSIDTLREEVTLSETELNSGLDK 933

Query: 847  QAEQKINF------QQEIEMLLKIASKIKEYYDLRKDER------FKELQEKKSQSESEV 894
              ++K  F      +QE +  L I    +   DL+K +       ++++ E    SES++
Sbjct: 934  LEKKKYIFHKDNWEKQETDRKL-ITEGSRRLSDLQKMQDDVDSFIYRKIPESLECSESKI 992

Query: 895  KSCKIRTDEILVE-------LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIES 947
            KS +   +E+  +       +++ K+ +  Q+  +R + DNL  RET+  ++    +  +
Sbjct: 993  KSYEKLLNELFCKKNDMETTINKLKEEMTRQEVRKRELLDNLKLRETQEIINNLQEQYSN 1052

Query: 948  LEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKD 1007
            ++ER+  I     F+ E          +L + N  +G     +  + +   +LK+  YK 
Sbjct: 1053 IKERLNTINYSEIFD-EWQNLQCREQTILRQKNMIKGNQEELERTVQQYIQELKKDIYKQ 1111

Query: 1008 IDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD 1067
              K +  + I+L   E +  +L  Y   LD A++++H  +M  +N+II++LW+  Y G D
Sbjct: 1112 ARKNYKSKCIELTVIEESILNLKEYSKVLDTAMIQYHEERMTTVNRIIKQLWKLVYTGTD 1171

Query: 1068 IDYIRIHSD-SEGAGT--RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
               I I +D +EG G   R+Y+YK++      E++M+GRCSAGQKVLAS+IIRLALAETF
Sbjct: 1172 TTSIEIRTDATEGIGGTKRTYNYKLVQMKHGHEIDMKGRCSAGQKVLASIIIRLALAETF 1231

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQR 1183
            C +CGILALDEPTTNLD  NA+SLA  L  +++ R + Q+NFQLIVI+HDE+F   + + 
Sbjct: 1232 CKDCGILALDEPTTNLDQENADSLANTLATVVKLRSQHQKNFQLIVISHDEKFLFKLAEL 1291

Query: 1184 QHAEKYYRVAKDDHQHSII 1202
               + +Y++ +    +S +
Sbjct: 1292 SSNKGFYQLYRKQTGYSTV 1310


>gi|328713323|ref|XP_001948559.2| PREDICTED: DNA repair protein RAD50-like [Acyrthosiphon pisum]
          Length = 1303

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 323/1229 (26%), Positives = 567/1229 (46%), Gaps = 98/1229 (7%)

Query: 24   SYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKAL 83
            S++CAD+D  +   +GVSK+IL++V+F HQ+++NWPL +   +K+KFD IF   +Y K +
Sbjct: 124  SHKCADLDDVMCTYLGVSKSILKDVVFCHQEDSNWPLDEDKKVKEKFDSIFDVGKYDKCI 183

Query: 84   EVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQ 143
            + I+   K    + +T      N+Q      +K RE     +   E  K    EL++ + 
Sbjct: 184  KQIQIEIKATQADKRTCN---NNIQHF----WKYREEARNKRATLENKKFSFDELQQKLN 236

Query: 144  DIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAE-----EIE------ 192
             ID +I   E   K++ K ++   ++  +  T          A+ +     ++E      
Sbjct: 237  SIDKEIIPLEERYKEIMKKEEHFFSLKNKLLTSEGNLNSIRLAIKDLKLLIKLEFKGNDS 296

Query: 193  DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAG 252
            D DEELKN+ NN      ++E D  KL   KND  T    +++N+      +    SE  
Sbjct: 297  DLDEELKNFNNNL----VQKEKDKYKLNCLKNDAITNENKIQENMSKEQVNLGRYQSEEK 352

Query: 253  AHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSD 312
             +++ +N++++ I +L       +LP+    N   +  I+ + + LS +   LE  +K +
Sbjct: 353  QNLNNINKQNAKIIELGNEMQF-NLPDLTEYNRVQV--ISNLSNNLSSMNDKLESTQK-E 408

Query: 313  ELALKMAWDSYLDANDRWKNIEAQKQAKM--EIKAGILKHIKEKENERDSFELQISNLNL 370
               ++    S +D+      I  +K AK+  EIK      IKEK+   ++ E+Q    ++
Sbjct: 409  HREIENKLQSNIDS------IRVEK-AKLDQEIK------IKEKQILENTSEIQKLKKDI 455

Query: 371  SHIDERENKM------RIEVERKTN----QLAEREFEINIRQKQSELFAMDQKIKALNRE 420
              +     K+      ++++E K N     L   + + +I +K+ E +  + K++ + +E
Sbjct: 456  DQVRNSAEKLSALQKSKVDIETKLNILRGSLNVDDVKKDINKKKDEKYEQNIKLEVIEKE 515

Query: 421  KDVLAGDSEDRVKLALKKAELEN---HKKKHKKIIDEYKDKIRDVLK---GRLPLDRDLK 474
               L         L++ +AEL+    +K      +   K+K+ DVLK   G +P ++ LK
Sbjct: 516  VQKLQL-------LSIVQAELDTVILNKTGIDNKLKILKNKVNDVLKDLLGFIPQEK-LK 567

Query: 475  KEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL 534
             E T  L       D LS   R   K +   Q ++  +  N + H K+    K+   S  
Sbjct: 568  FEFTSFL-------DKLSDTIRCNRKSIAEKQKQLTTLEANYN-HTKEKLRTKQIELSND 619

Query: 535  ESLNQQIFSIDTYQKVLDSAKEK-RDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCER 593
            E+    +     Y+ +L    EK  ++Q  K +++          + +      CP C R
Sbjct: 620  ENALSDMCQGQEYETILKEVNEKVEELQAQKGSVSTSGHLFRRYIKNLEAQDPSCPLCHR 679

Query: 594  PF-SAEEEDEFVK--KQRVKAASSAEHMKVLSLESS-NADSYFQQLDKLRMVYEEYVKLS 649
             F S +E  E +     RV    S     +  LE+     S  QQL   R  Y     L 
Sbjct: 680  CFGSIDEVTELINDLNMRVHKIPSELETTIAQLETLLKKQSKLQQL---RPTYTRISVLK 736

Query: 650  KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET----ADRLF 705
            +  IP    NL +  E +    +   D L  L+      E+ E   + +++     D   
Sbjct: 737  QTEIP----NLKDELERISSNLRKCRDELTKLSDENGKLETNETNAKNIQSDIIMIDSFD 792

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMEN 765
             +++ + K+   L   +   G  +R ++E   E +   ST + + N LEK + E      
Sbjct: 793  NDVKRYSKEEQRLTTKMTESG-SIRNLQEAISERNALKSTINEICNVLEKKQYELNEYTE 851

Query: 766  DLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKE 825
             L N+Q + + +  +++   + ++D K   ++L  L   +  + L+     E  GP+ ++
Sbjct: 852  MLHNLQTQQNKITSDELNIKSKMQDEKSVIDKLNDLQNLEATISLELDSARETLGPIQEK 911

Query: 826  KEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQE 885
             +  ++ +   K + +R+ E   ++ I  +++I+ +  + S I  Y       R KE   
Sbjct: 912  LDTCINTFEQTKKQQSRKIENNRKEIIILEKKIQEINNLQSSIDNYEKKEWTLRIKETNN 971

Query: 886  KKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
              +    E  +       +  ++D   +   NQ+  + ++E+N   R+   +  +  SEI
Sbjct: 972  LLNNLNKEKMNYIEEQKNLQKQIDSINEYNANQEVKKIDLENNKKLRQKSKEEIECLSEI 1031

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQY 1005
                E       V++  +E   +  +R  L  E N+  G        I     +L    +
Sbjct: 1032 NKFHED-FGTMDVNSLLSEKSTNTKQRQALAEEKNKSLGRKQELDNIIRHITEELTAIHF 1090

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            K+ +  +  + +QL+      KDL +Y  AL+ A+ RFH  +M+ IN II++LW+  Y G
Sbjct: 1091 KNAENIYLHEKVQLEILNRVEKDLTKYNKALEWAMNRFHKERMQSINTIIKKLWRDIYTG 1150

Query: 1066 QDIDYIRIHSDSEGAGT-------RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRL 1118
             DIDYI+I + S+           R ++Y+V+    + EL+MRGRCSAGQKVLA LI+R+
Sbjct: 1151 NDIDYIQIKTSSDDKPIQTDTIKKRVFNYRVVQIKNEVELDMRGRCSAGQKVLACLIVRM 1210

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            ALAETF  NCGILALDEPTTNLD  N +SLA +L  I+  R  Q++FQL++ITHD  F +
Sbjct: 1211 ALAETFSKNCGILALDEPTTNLDESNIQSLAESLSEIITRRSSQKSFQLLIITHDPNFLR 1270

Query: 1179 LIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             +  R   + YY V + +   SI+  Q+I
Sbjct: 1271 KLSARDMVDTYYEVKRSNEGMSIVCEQDI 1299


>gi|294887375|ref|XP_002772078.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983]
 gi|239876016|gb|EER03894.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983]
          Length = 1328

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 177/479 (36%), Positives = 272/479 (56%), Gaps = 37/479 (7%)

Query: 746  KDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEK 805
            KD L       R E   ++  L++++ R   +R+ + +      +++K +E+++   EE 
Sbjct: 870  KDKLVEGHSTSRVENEKLKGKLTSLRERLGRIRDAESEGTRAAEELRKLDEQMDGCREEL 929

Query: 806  GQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKI 864
            G+L+            +   + K     N      +RE  E  EQ++   QQEI+   ++
Sbjct: 930  GRLN----------EGVETARRKFAEVRNS-----SREVVESKEQRVREVQQEIDGSRQL 974

Query: 865  ASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRN 924
             + I    D  K ++  E+Q K +++E+  +S     +E+  +  + +  +R +++ R  
Sbjct: 975  VNSISALRD--KSQKSSEIQRKFAEAEAAERSATDTVEELRTKRGQCEGELREKERCREE 1032

Query: 925  IEDNLNYRETKAKVDKFASEIESLEER--VLKIGGVSTFETELGKHLLERDRLLSEVNRC 982
            +  N+  +  + ++ +F  E+E+L++   V+   G +    +L   +L    L    +R 
Sbjct: 1033 VVQNIKLKSLQRELSEFEQEVETLQQEYGVVDFAGKAKQVEDLRSSVLS---LREHKSRI 1089

Query: 983  QGTMS--VYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKAL 1040
            +G +S  V Q     +++D   + YK+ID RH   LIQ + + MA +DL RY++ALDKAL
Sbjct: 1090 EGKVSQLVDQQRAVSHQLD--SSLYKNIDDRHRSALIQHEVSAMATQDLSRYHSALDKAL 1147

Query: 1041 MRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GAGT-------RSYSYKVLMQ 1092
            MR+H  KM EIN++IRELWQQ YRG+DIDYI I SD+E GA         RSY+Y+V+M 
Sbjct: 1148 MRYHVSKMMEINRVIRELWQQVYRGRDIDYIAIRSDTEDGAANVTSATRLRSYNYRVVMT 1207

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
                E++MRGRCSAGQ+VLASLIIRLALAE+FC NCGILALDEPTTNLD  N E LA AL
Sbjct: 1208 CQGVEVDMRGRCSAGQRVLASLIIRLALAESFCCNCGILALDEPTTNLDSTNIEGLADAL 1267

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQ--LIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
              ++E R+   NFQL++ITHDE F +  + G     + YYRVAKD+   S I    + D
Sbjct: 1268 ADLIETRRNSSNFQLLLITHDEEFVRKLVTGPTHPCDYYYRVAKDNEGFSFIRQCNVID 1326


>gi|90083983|dbj|BAE90942.1| unnamed protein product [Macaca fascicularis]
          Length = 584

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/224 (58%), Positives = 169/224 (75%), Gaps = 5/224 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+F
Sbjct: 348  GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 407

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAEL 1098
            H+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L
Sbjct: 408  HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTAL 467

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLASLIIRLALAETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ 
Sbjct: 468  DMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKS 527

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 528  RSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 571


>gi|307184041|gb|EFN70591.1| DNA repair protein RAD50 [Camponotus floridanus]
          Length = 1368

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 298/1238 (24%), Positives = 583/1238 (47%), Gaps = 128/1238 (10%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K ++S +  ++    EK  ++ RCAD+D E+   +GVSK+IL  VIF HQ+E NWP   
Sbjct: 109  FKTLDSTVTRVSKDKKEKASITNRCADVDAELSVALGVSKSILNYVIFCHQEELNWPFDQ 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
              TLK++FD+IF +T++ KALE I KLHKD   +IK+   + +  + L          + 
Sbjct: 169  GKTLKERFDEIFDSTKFNKALETILKLHKDLQGDIKSLNAEKQTFKVLVSEVENKETKLE 228

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            + +++ +  K ++ +++K +  +  KI   + +  + + +Q +            E+ QK
Sbjct: 229  EHKKRLDITKEKINDIDKQLVPLKQKIEEVQQSHSEYKNIQAEEEKKKMEYGVYKERYQK 288

Query: 183  QYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTA 242
                +      T EEL     + + I+ ++ ++I+     +N+++ K       I    A
Sbjct: 289  LKETINNIFHGTTEELNALIESHDTILQEKNNEIA-----ENEIEIK------GISEKEA 337

Query: 243  EITNLLS-----------EAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFI 291
             I+N+L+           +   H  R+  R+  + +     N  ++       E      
Sbjct: 338  RISNILATRRETVGTFKQQVKDHEKRVVRRNELLNEALQAWNFDTVEQDVTEIEVKA-LT 396

Query: 292  NRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHI 351
             R+  ++  LE+++E+ + + E   K +          +  IE++K  K        K I
Sbjct: 397  KRLEQKIRTLEQEIEENRMAMEKKEKQSQKEVDILCSNYLKIESEKTLKE-------KEI 449

Query: 352  KEKENERDSFELQISNLN-----LSHIDERENKMRIEVERKTNQLAEREFEINIRQK--- 403
             E  +E  +   QI+ +      L  I+++    + +++  +N L     + +I  K   
Sbjct: 450  TEIRDEITTIRNQIAQIGAAGNKLKSIEQKLQAAKQKIDELSNALDVDSVKTDIANKIKS 509

Query: 404  ----QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKI 459
                ++ L A+D +I +L++   +       +  L  K+ ELEN K+KH        + I
Sbjct: 510  RDKIEANLSAIDDEISSLHKLSSLKTEFDLKKSTLQAKEEELENLKRKH-------GNSI 562

Query: 460  RDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKH 519
            + +L  +      LK  + +  + L  E   L+ + +  +++    Q  +Q +  ++ K 
Sbjct: 563  KTLLNTQELQQTKLKITLDRVHQQLEKETTSLTQEIQAQERKTTAFQTTLQYIESDIGKK 622

Query: 520  RKDVDSKKRFIESKLESLNQQIFSIDTYQK----VLDSAKEKRDVQKSKYNIADGMRQMF 575
            + ++   K           ++I ++  Y++    +L  +K  +D+Q  +   A       
Sbjct: 623  KTELHRDK-----------ERISTVCDYKEFDETLLMQSKIVKDLQDKRGIYAYQATAYK 671

Query: 576  DPFERVARAHHVCPCCERPFS---------AEEEDEFVKKQRVKAASSAEHMKVLSLESS 626
            +  ++++     CP C R F           E E + ++ Q  +     E +K+   +  
Sbjct: 672  EYIKKLSVKDPCCPLCHRNFQEQNKVTDLIKEMETDIIRNQPNRLKKCEEELKI---QQE 728

Query: 627  NADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKA 686
              D+  Q    L+ + ++ ++  +  +   E+ L +    +     A  D    L   KA
Sbjct: 729  KYDNMLQ----LKPIVQKIIQCEETDLKKLEERLEKTKNSVKLSKIAIKD----LEVSKA 780

Query: 687  DKESVEVL----VQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQLELSG 741
            + E   +L    +  ++  DR   EIQ  +K V++L+  + + G +  +T+EE+Q++   
Sbjct: 781  EPEKKLLLYKDMIGDIKFWDRCIDEIQQLKKTVNNLQTQMANAGVKTEKTLEELQVQRES 840

Query: 742  SLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL 801
              ++    +N +E L+ +       L   +  ++ L E+++K  + +       ++L+HL
Sbjct: 841  LKTSFKETRNHIEALQLKLNKHNERLHEARETYNELHEQQLKIHSDM-------QKLKHL 893

Query: 802  MEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDL--------KVKLNREYEEQAEQKIN 853
             +++  L + E  + E    + K +E L +  N L        K+KL    ++ A++K+ 
Sbjct: 894  KDKQEDLYVKEVTIGET---VEKLQENLANAENQLDSGKQQLEKIKLENRQKQDADRKLM 950

Query: 854  FQQEIEM--LLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEIL-----V 906
             +    +  L KI  ++  +           + +K +  E E+++ +    E++     V
Sbjct: 951  MENTRRLTDLHKIIDEVDSFIS-------SNVPKKLASYELEIETYQKSLMELINKKKNV 1003

Query: 907  E--LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
            E  +++ K+ V +Q+  +R + DN+  R+TK  ++    + + L E+ LK    S    +
Sbjct: 1004 EQAINKLKEDVASQEIGKRELHDNITLRKTKDTIEALKEQYKKLNEK-LKNMNYSELTKK 1062

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
              +   E+  LL + N   G     +  I +   +L++ +Y+   + + ++ I+L   E 
Sbjct: 1063 WEQLESEKQALLRQKNVALGNQEELERVIKQYMQELRKEEYRLARRNYTNKCIELTVQED 1122

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE---GAG 1081
               +L  Y   LD A++ +H  +M  +N+I+++LW+  Y+G D   I I ++     G+ 
Sbjct: 1123 TIANLKAYSKILDTAMIEYHEERMSTVNRIMKKLWKHVYKGTDTSSIEICTEPTKDVGSN 1182

Query: 1082 TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             RSY+YK++      +++M+GRCSAGQKVLAS+IIRLALAETFC +CGILALDEPTTNLD
Sbjct: 1183 RRSYTYKLIQTKHGCKMDMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLD 1242

Query: 1142 GPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQ 1178
              NA SLA  L +++E R + Q+NFQLI+I+HDE+F Q
Sbjct: 1243 EENANSLADTLTKVVELRSRYQKNFQLIIISHDEKFLQ 1280


>gi|307211956|gb|EFN87868.1| DNA repair protein RAD50 [Harpegnathos saltator]
          Length = 1371

 Score =  272 bits (696), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 322/1265 (25%), Positives = 588/1265 (46%), Gaps = 158/1265 (12%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K +++ L  I+    EK  ++ RCAD+D E+   +GVSK+IL  VIF HQDE NWP   
Sbjct: 109  FKTLDNTLTRISKDKKEKTSITNRCADIDAELSIALGVSKSILNYVIFCHQDEFNWPFDQ 168

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
              TLK +FD+IF + ++ KALE I KL+K+        ++ + +L   K++   +   + 
Sbjct: 169  GKTLKDRFDEIFDSKKFNKALENIGKLYKE-------LQVNIRSLTAEKESCNIVVSEVK 221

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTA---RRSTLFEQ 179
              + K +  K ++   ++ I  ID ++   +  +KD+ ++  +   + A   ++   +  
Sbjct: 222  SRETKLKDYKQRLNTTKEKINVIDKELESLQQKIKDMEQLHSEYKNIQAVEEKKKMEYTM 281

Query: 180  QQKQYAALAEEIED----TDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQ 235
             +++Y  L   +E+    T EEL     +++ I+ ++ ++I++ E E  D+ TK      
Sbjct: 282  LKERYVKLRNTVENIFEGTTEELNVHIQSYDSILKEKNNEITENEAEIEDISTK------ 335

Query: 236  NIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHN---------LGSLPNAPFSNEA 286
                  A I+N+L+     +  + ++    +K   R N          G     P  +E 
Sbjct: 336  -----EARISNILATRRETVGTLKQQVKDQEKRIIRRNQLLDDALRVCGLDTVGPDVSEI 390

Query: 287  ALNFIN-RIRSRLSDLERDLEDKKKS---DELALKMAWDSYLDANDRWKNIEAQKQAKME 342
             +  +  R+  ++  LER LE+ + +    E  L+   D     + +   IE++K  K  
Sbjct: 391  EVKALTKRLEQKMRTLERKLEENRSAMQRQEEKLQKELDKVRSNHSK---IESEKILKE- 446

Query: 343  IKAGILKHIKEKENERDSFELQISNLN-----LSHIDERENKMRIEVERKTNQLAEREFE 397
                  K + E  N+  +   QI+ +      L  ++E     +  ++  +  L     +
Sbjct: 447  ------KEVTEIRNDVTAIRNQITQIGAAGNKLKSLEEALQTAKQRIDDISKMLDVDSVK 500

Query: 398  INIRQK-------QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKK 450
             +I+ K       +  L A+D +I +L++   + A     +  L  K+ E EN K+KH  
Sbjct: 501  ADIKSKVKSRDKIEESLSAVDDEISSLHKLSSLTAEFELKKSTLQAKEEEFENLKRKH-- 558

Query: 451  IIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQ 510
                  + I+ +L         L+  + +  + L  E + L+ + +  ++    L+  ++
Sbjct: 559  -----GEDIKTLLNVPELQHTKLRSSLQRVHQQLEKESNSLTREIQAQERRTTALETTMR 613

Query: 511  EVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTY----QKVLDSAKEKRDVQKSKYN 566
             +  +++K R + +  K           Q+I  +  Y    + +L  +K  +D+Q  +  
Sbjct: 614  HMEFDIAKKRTEFERDK-----------QKISVVCDYKDFDETLLMQSKIVKDLQDQRGV 662

Query: 567  IADGMRQMFDPFERVARAHHVCPCCERPFS---------AEEEDEFVKKQRVKAASSAEH 617
             A       +  ++++     CP C R F           E E + ++ Q  +     E 
Sbjct: 663  YAYQATAYKEYIKKLSMKDPCCPLCHRDFQEQKKVTELIKEMESDIIRNQPSRLKRCEEE 722

Query: 618  MKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDV 677
            +K    E    D+  Q    L+ + E+ ++  +  +   ++ L +    L Q       +
Sbjct: 723  LKT---EQKKYDNMLQ----LKPIVEKIIQCEENDLKKLDERLEKTKNNLTQSKMCVKTL 775

Query: 678  LGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEIQ 736
             G  A+ +      + ++  ++  DR   EI+  +  VD+++  + + G Q  RTMEE Q
Sbjct: 776  EGSKAEPEKKLMLWKNIIGDIQLWDRCVDEIRHLKTTVDNMQTQMANAGIQTQRTMEEAQ 835

Query: 737  L---ELSGSL----STKDNLQNEL----EKLRDEQRYMENDLSNIQIRWHTLREEKVKAA 785
                +L  S     S  +NL  +L    EKL+D  R   N+L   Q++ H+         
Sbjct: 836  TQREQLKKSFKEIRSHIENLHLKLNKHNEKLQD-ARATYNELHEKQLQIHS--------- 885

Query: 786  NTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYE 845
                D++K    L+HL +++  L   E  +AEA        EKL  D   ++ +LN   +
Sbjct: 886  ----DMQK----LKHLKDKQEDLYTREVNVAEAV-------EKLREDLMVVEDQLNSSIQ 930

Query: 846  EQAEQKI-NFQQEIEMLLKIASKIKEYYDLR----KDERF--KELQEKKSQSESEVKSCK 898
               + K  N+Q++      +A   +   DL     + E F    + EK +  E ++++ +
Sbjct: 931  ILEKTKAENWQKQETDRKSVAENTRRLSDLHNIIDEVESFINSNVSEKLTSYERDIETHQ 990

Query: 899  IRTDEIL-----VE--LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER 951
                E+      VE  + + K+ V  Q+  +R + DN+  RETK  ++    E   L   
Sbjct: 991  KSLAELTNLRKNVEQTIGKLKEDVATQEIKKREMLDNMTLRETKEGMETLKEEHRQL--- 1047

Query: 952  VLKIGGVSTFETELGKHLLERDR--LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDID 1009
             L++  ++  E      +LE +R   L + N   G     +  I +   +L++  Y+   
Sbjct: 1048 ALQLKDMNYNEISTKLKMLENERQTTLRQRNVSLGKQEELERVIEQYTQELQKEVYRLAR 1107

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            + + D+ I+L   E    +L  Y   LD A++ +H  +M  +NKI+++LW+  Y+G D  
Sbjct: 1108 RNYTDKCIELAVEEDTIANLKAYSQILDAAMIEYHEERMATVNKIMKKLWKHIYKGTDTS 1167

Query: 1070 YIRIH---SDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1126
             I+I    +D  G+  RSY+YK++      E++M+GRCSAGQKVLAS+IIRLALAETFC 
Sbjct: 1168 SIQIRTEPTDGVGSNRRSYNYKLIQTKHGCEMDMKGRCSAGQKVLASIIIRLALAETFCK 1227

Query: 1127 NCGILALDEPTTNLDGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQH 1185
            +CGILALDEPTTNLD  NA SLA  L +++E R K Q+NFQLI+I+HDE+F Q +    +
Sbjct: 1228 DCGILALDEPTTNLDEENANSLADTLTKVVEMRSKHQKNFQLIIISHDEKFLQKLADLNN 1287

Query: 1186 AEKYY 1190
             +K++
Sbjct: 1288 HKKFH 1292


>gi|159470203|ref|XP_001693249.1| DNA repair protein [Chlamydomonas reinhardtii]
 gi|158277507|gb|EDP03275.1| DNA repair protein [Chlamydomonas reinhardtii]
          Length = 1410

 Score =  272 bits (696), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 136/238 (57%), Positives = 174/238 (73%)

Query: 941  FASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDL 1000
             + +++ +E  V ++G     + +      +RD L S+V+   G M       ++ + +L
Sbjct: 1157 LSRQVQEMEAEVARVGDQFELQRQSAALAGQRDGLRSQVDVLSGHMGAASAAAAKAQAEL 1216

Query: 1001 KQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQ 1060
               +++DI  R   Q +  KTTE+A  DLD+YY AL+KAL+ FHT KM +INKII+E+WQ
Sbjct: 1217 NNPKFRDIRPRFQLQQVTAKTTELAMADLDKYYKALEKALLVFHTSKMADINKIIKEMWQ 1276

Query: 1061 QTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            +TYRGQDIDYI+I +D+EGAG RSY+Y+V+M +G AELEMRGRCSAGQKVLA LIIRLAL
Sbjct: 1277 KTYRGQDIDYIQIKADTEGAGARSYNYRVVMYSGAAELEMRGRCSAGQKVLACLIIRLAL 1336

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            AETFCLNCGILALDEPTTNLD  N+ SLA AL  +M+ R GQENFQLIVITHDE FAQ
Sbjct: 1337 AETFCLNCGILALDEPTTNLDAANSASLAEALAALMKSRSGQENFQLIVITHDEHFAQ 1394



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 39/244 (15%)

Query: 36  ALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQ 95
           A +G  +AILENVIFVHQ+E+NWPL +                  KALE ++KL  +++Q
Sbjct: 283 AALGAGQAILENVIFVHQEESNWPLAE-----------------GKALEALRKLRTEKSQ 325

Query: 96  EIKTYKLKLENLQTLKD-AAYKLRE------SISQDQEKTEALKNQMQELEKSIQDIDDK 148
            +K  +L+LE L+ LKD AA+   E       ++  QE+ + L+ Q++ELE S    + K
Sbjct: 326 SLKELRLELETLKQLKDMAAHHTGERDAAKARVADCQEQIKRLEAQVKELETSRAAFESK 385

Query: 149 IHHTELTLKDLRKMQDQISTMTAR---RSTLFEQQQKQYAALAEEIEDTDEELKNWKNNF 205
           +   E   +D+     Q+  + A+   R+  FE + +Q      + E+  EEL  + +N 
Sbjct: 386 LAAIEAAGRDITAKAGQLEVVRAQNAERAARFEAEGRQ------DYEEPTEELVRFLDNA 439

Query: 206 EGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEIT---NLLSEAGAHMSRMNERD 262
           +   A + + +  LE E N    +I   E   DAY   +     L  EA  H + + ERD
Sbjct: 440 DRAAADKAARLRALEGEAN--SARIAK-EAAADAYQKHLVLHGKLAGEAATHTANIAERD 496

Query: 263 STIQ 266
             I+
Sbjct: 497 RAIR 500


>gi|67526323|ref|XP_661223.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4]
 gi|40740637|gb|EAA59827.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4]
 gi|259481852|tpe|CBF75760.1| TPA: subunit of MRX complex (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 1319

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 224/728 (30%), Positives = 380/728 (52%), Gaps = 48/728 (6%)

Query: 500  KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRD 559
            +E+  ++ K+++V  +L++ +K++   K  +E   E+++ +    + Y  V+   + + D
Sbjct: 616  RELEQVEYKLKDVEKSLTQRQKEL---KECVEEIREAIDDEP---EEYPDVVSQRQNQLD 669

Query: 560  VQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-DEFVKK-----QRVKAAS 613
            + KS      G+ +        A+   +C  C R F  + +   F  +     +R K  +
Sbjct: 670  MAKSTAEQGAGIEEYMSRCLATAKEDKICRVCARSFKNDNDLRTFFNRLEGLIKRAKLQA 729

Query: 614  SAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
             AE ++ L   L  + A S           Y+ + +L +  IP  ++   + T E D+  
Sbjct: 730  QAEDVEQLEQDLNVARAAS---------TAYDTWKRLKETEIPELQQEDEKYTLERDELL 780

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRT 731
               +D    ++++   K  +E L + V T  R   +I+  + Q+ DL           RT
Sbjct: 781  GQLEDRDKAVSEMVEKKRDIEALSKTVSTIVRYDSDIKSTRAQIQDLSSKQQQNTAAPRT 840

Query: 732  MEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDV 791
            +E+IQ E++        L+  L KL +E+ +   ++++++++   LR+ K    N    +
Sbjct: 841  LEDIQDEIASIGEKTRALKKTLSKLTNEREHARAEINSLELQ---LRDVKSNLDNVKFQL 897

Query: 792  KKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLL---SDYNDLKVKLN-REYEEQ 847
            ++  + L  + E K   +   + +A+A   +     +LL   + Y+D+  +   RE E  
Sbjct: 898  ERKADLLSRIEEYKTLNNQQREAIAKADRDIEDLNPELLKYQAIYDDISQRAEARERE-- 955

Query: 848  AEQKINFQQEIEML------LKIASKIKEYYDLRKDERFKELQEKKSQS-ESEVKSCKIR 900
                   QQ I  L      +++AS+  + Y+ R      +  +++ +S E+E+   +  
Sbjct: 956  ------LQQIISQLSDSIHQVELASEEIDAYNERGGPHQLDRSKRELKSIENEISQLETE 1009

Query: 901  TDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST 960
               +   +++    +++ +  +R   DNL YR++    DK  SEI  LE +  ++   S 
Sbjct: 1010 QAALTRTINKISTQLKDSENTKRQYADNLTYRQSVRAFDKVTSEIRELESKNAEVDR-SR 1068

Query: 961  FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLK 1020
            F+ E  +   E + L ++ +   G M      + +   D     YKD   ++ +  I+++
Sbjct: 1069 FKEESERRSREHNALSAKQSSKMGEMKSKDDQLMQLIKDW-DTDYKDAAYKYKEAHIKVE 1127

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA 1080
            TT+ A +DL RY  ALDKA+M++H +KMEEIN II ELWQ+TYRG D+D I I SD+E A
Sbjct: 1128 TTKAAVEDLARYGTALDKAIMKYHGLKMEEINAIIGELWQKTYRGTDVDTILIRSDNENA 1187

Query: 1081 -GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             G RSY+Y+V M    AE++MRGRCSAGQKVLAS+IIRLALAE F +NCG++ALDEPTTN
Sbjct: 1188 RGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTN 1247

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +     ++ YYRV++++ Q 
Sbjct: 1248 LDRDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRYMQCGDFSDYYYRVSRNERQK 1307

Query: 1200 SIIEAQEI 1207
            SIIE Q I
Sbjct: 1308 SIIERQSI 1315


>gi|349605880|gb|AEQ00968.1| DNA repair protein RAD50-like protein, partial [Equus caballus]
          Length = 368

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 130/222 (58%), Positives = 168/222 (75%), Gaps = 5/222 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+F
Sbjct: 132  GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 191

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAEL 1098
            H+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L
Sbjct: 192  HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSAADKRRNYNYRVVMLKGDTAL 251

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ 
Sbjct: 252  DMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKS 311

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S
Sbjct: 312  RSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCS 353


>gi|444517242|gb|ELV11437.1| DNA repair protein RAD50 [Tupaia chinensis]
          Length = 977

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 212/646 (32%), Positives = 347/646 (53%), Gaps = 49/646 (7%)

Query: 587  VCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEY 645
             CP C+R F  E +  E +   + K   + + +K    E    +    ++  L  V +  
Sbjct: 340  CCPVCQRVFQTEADLQEVISDLQSKLRLAPDKLKSTETELKKKEKRRDEMLGLVPVRQSI 399

Query: 646  VKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
            + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V   +R  
Sbjct: 400  IDLGEKEIPELRNKLQNVNRDIQRLKNEIEEQETLLGTIMPEEESAKVCLTDVTIMERFQ 459

Query: 706  QEIQLWQKQVDDLEYMLDSRGQGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRY 762
             E++  ++++   E  L    QG+   RT++++  E        D + +++E  R   + 
Sbjct: 460  MELKDVERKIAQQEAKL----QGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQD 515

Query: 763  MENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPL 822
             +  + +++   + L+ EK++ +  L+  ++ EE+   L  E   L  + K   E   PL
Sbjct: 516  QQEQIQHLKSTANELKSEKLQISANLQRRQQLEEQTVELSTEVQSLYREIKDDKEQVSPL 575

Query: 823  -------SKEKEKLLSDYND----LKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEY 871
                    +EKE+L++  N     ++ KLN + +E+ +    + ++IE  ++        
Sbjct: 576  ETTLQKFQQEKEELINKKNASNKIVQDKLN-DIKEKVKNIHGYMKDIENYIQDGK----- 629

Query: 872  YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNY 931
            YD +K ++  EL +  +Q    +  C+   ++I  E+   +  +  Q    R ++DNL  
Sbjct: 630  YDYKK-QKETELNKVAAQ----LSECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTL 684

Query: 932  RETKAKVDKFASEIESLEERVLK-IGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSV 988
            R    K ++   E+E   ++ LK +G +   + +     LE   D +    +   G    
Sbjct: 685  R----KRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG 740

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
            Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+ +M+FH+MKM
Sbjct: 741  YEEEIMHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQTIMKFHSMKM 800

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            EEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGR
Sbjct: 801  EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR 860

Query: 1104 CSAGQK-------VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            CSAGQK       VLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I+
Sbjct: 861  CSAGQKAEGLLFQVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEII 920

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            + R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S I
Sbjct: 921  KSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEI 966



 Score = 40.0 bits (92), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/138 (21%), Positives = 77/138 (55%), Gaps = 6/138 (4%)

Query: 68  KKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEK 127
           K  + + +  +Y KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I+  + +
Sbjct: 84  KTLEGVINRIKYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITNKEAQ 143

Query: 128 TEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAAL 187
             + K  ++  E  +  + ++++  E  L  + ++ ++I  + +R+    +Q +K    L
Sbjct: 144 LTSSKEIVKSYENELDPLKNRLNEIERNLSKIMRLDNEIKALESRK----KQMEKDNNEL 199

Query: 188 AEEIE--DTDEELKNWKN 203
            +++E  D DE+++  K+
Sbjct: 200 EQKMEKADKDEQIRKIKS 217


>gi|74215662|dbj|BAE21438.1| unnamed protein product [Mus musculus]
          Length = 261

 Score =  270 bits (689), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 131/222 (59%), Positives = 168/222 (75%), Gaps = 5/222 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+F
Sbjct: 25   GRQKGYEDEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 84

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAEL 1098
            H+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L
Sbjct: 85   HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTAL 144

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ 
Sbjct: 145  DMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKS 204

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            R  Q NFQL+VITHDE F +L+G+ ++ EK+YRV K+  Q S
Sbjct: 205  RSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRVKKNMDQCS 246


>gi|198413452|ref|XP_002120395.1| PREDICTED: similar to RAD50 homolog, partial [Ciona intestinalis]
          Length = 438

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 173/444 (38%), Positives = 265/444 (59%), Gaps = 38/444 (8%)

Query: 780  EKVKAANTLRDVKKAEE--ELEHLMEE-----KGQLDLDEKLLAEASGPLSKEKEKLLSD 832
            EK+K A    D++K E+  EL+   E      K +++L+E+ +A    PL +E E L S 
Sbjct: 2    EKLKLAA---DLQKCEQLQELQRTTESEIQNIKSKIELNERSIA----PLVREVENLESK 54

Query: 833  YNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDL-------RKDERFKELQE 885
               + +  N +  +  +     Q +++ L ++   I  +          R  +  +EL+ 
Sbjct: 55   KKKVAISNNDKITKARDVLQTLQNKLKELERVNKNIDNFNKSSVPTKLQRTSKEIEELES 114

Query: 886  KKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
            K    E+++K  K+RTD   ++    K+I    D+ +R++EDN   RE   +++    ++
Sbjct: 115  KIVDFENKMK--KLRTDIARLQ----KEIATCTDR-QRDLEDNSALRERNREIEDVRKKL 167

Query: 946  ESLEERVLKIGGVST--FETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQA 1003
              +EE   K+GG++    ++E+ +   E   L  E  RC+        N+   + +L + 
Sbjct: 168  LEMEE---KLGGMNAAKLDSEVRQLTKEHSDLTKEKERCKVRQESLGENVRSLQQELSRE 224

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
             +K  DKR+ D L+   T E+A  DLD+YY ALD+A+M++H +KM+EINKIIRELWQ+TY
Sbjct: 225  NFKFADKRYKDCLVSATTLELAIGDLDKYYKALDRAVMKYHQIKMDEINKIIRELWQETY 284

Query: 1064 RGQDIDYIRIHSDSEGAGT----RSYSYKVLMQT-GDAELEMRGRCSAGQKVLASLIIRL 1118
            +G+DI+YI+I S  +  G+    R+++Y+V+M       ++MRGRCSAGQKVLASL+IRL
Sbjct: 285  KGRDIEYIQICSSEDTGGSTAARRTFNYRVVMYCYSGTPMDMRGRCSAGQKVLASLVIRL 344

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            ALAETFC+NCGILALDEPTTNLD PN  SLA AL  I++ R  Q NFQL+VITHDE F +
Sbjct: 345  ALAETFCINCGILALDEPTTNLDRPNVLSLAEALLSIIQSRSQQRNFQLVVITHDEEFVE 404

Query: 1179 LIGQRQHAEKYYRVAKDDHQHSII 1202
            +I +  H + ++RV KDD+  S I
Sbjct: 405  IISRSNHVDHFFRVEKDDYGRSRI 428


>gi|295443032|ref|XP_001713090.2| DNA repair protein Rad50 [Schizosaccharomyces pombe 972h-]
 gi|259016326|sp|Q9UTJ8.3|RAD50_SCHPO RecName: Full=DNA repair protein rad50
 gi|254745547|emb|CAB96041.3| DNA repair protein Rad50 [Schizosaccharomyces pombe]
          Length = 1285

 Score =  269 bits (687), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 229/672 (34%), Positives = 352/672 (52%), Gaps = 116/672 (17%)

Query: 585  HHVCPCCERPFSAEEEDEFVKKQR----VKAASSAE---HMKVLSLESSNADSYFQQLDK 637
             H C  C+R    EEE  FV+       V  + SAE   H++ L+         F+ L +
Sbjct: 671  QHACQLCQRSLDKEEEKLFVEHCHSMIDVIPSKSAEVYSHLETLT-------KTFKNLSE 723

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
             + +++E        I + +K L E   EL        D+ G L  +   K+ ++  +  
Sbjct: 724  AKPIFDE--------IELLDKRLSETKTELS-------DLQGDLQGLDIRKDEIQSELDT 768

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTM----EEIQLELSGSLS--TKDNLQN 751
            +       +++QL  K + +LE       + +RT+    E +++EL  S++    D +  
Sbjct: 769  LYLRRANLEKLQLLVKDISNLE-------EEIRTIDRETEVLRIELPSSIAHHNLDEIYA 821

Query: 752  ELEKLRDEQRYMENDLSNIQIRWHTLR-----------EEKVKA------ANTL----RD 790
            E EKL +++ Y+   +   ++   + +           E+K+K        N L    +D
Sbjct: 822  EREKLLEKRGYLRKQIERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQLEKD 881

Query: 791  VKKAEEELEHLMEEKGQLDLDEKLLAEAS--GPLSKEKEKLLSDYNDLKVKLNREYEEQA 848
            + K+ E+ +  +++K  L++  K  ++A     L  E EKL +D  ++  K   E  E  
Sbjct: 882  INKSSEDCD--LQKKKLLEVSSKQGSQAPFLNELESEYEKLEADIQEMAQKSRTEILEAN 939

Query: 849  E--QKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVK--SCKI-RTDE 903
            E   ++N +   E+ + +++K            FK ++EKKS    EV+  + KI  TD+
Sbjct: 940  EYLHQLN-EWNSELRIDVSTK------------FKCIKEKKSNIGEEVRIIASKIESTDD 986

Query: 904  ILVEL-DRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI------------ESLEE 950
             L +L +R  D+ R ++   RN  DNL  R    ++++  ++             ES  E
Sbjct: 987  NLRKLQERLADL-RTRE---RNASDNLRLRALMRQLEEAVTQKNYLLSQQSHDDRESFRE 1042

Query: 951  RVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDK 1010
            R+         +++ G    ER  LL E  + + +       I+++K +L   ++KD D+
Sbjct: 1043 RM------QILKSKYGALNAERAGLLGECKQLENS-------ITKDKEEL-NMEFKDADE 1088

Query: 1011 RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1070
            R   QLI+ KTT  AN+DL +Y  ALD A+M+ H+MKM EIN+I+ ELW+QTY G DID 
Sbjct: 1089 RFRRQLIKTKTTGKANEDLGKYAKALDVAIMQLHSMKMNEINRIVDELWKQTYCGTDIDT 1148

Query: 1071 IRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGI 1130
            I I SDSEG G R+Y+Y+V M  GDAEL+MRGRCSAGQKVLA +IIRLALAE   +NCGI
Sbjct: 1149 ILIRSDSEGKGNRTYNYRVCMVKGDAELDMRGRCSAGQKVLACIIIRLALAECLGVNCGI 1208

Query: 1131 LALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYY 1190
            LALDEPTTNLD  N  SLA  L RI+E R+ Q NFQLIVITHDE+F +L+    +   YY
Sbjct: 1209 LALDEPTTNLDEENICSLAKNLSRIVEFRRKQANFQLIVITHDEQFIRLVNSDAYCSYYY 1268

Query: 1191 RVAKDDHQHSII 1202
            RV +D +Q S+I
Sbjct: 1269 RVKRDTNQKSMI 1280


>gi|405962727|gb|EKC28376.1| DNA repair protein RAD50 [Crassostrea gigas]
          Length = 616

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 204/583 (34%), Positives = 317/583 (54%), Gaps = 42/583 (7%)

Query: 635  LDKLRMVYEEYVKLS--KETIPVAE-KNLHELTEELDQKSQAFDDVLGVLAQIKADKESV 691
            LD+ R  Y+  ++L   KE I   E K + EL  +L    +  +D+  +   I+  +E +
Sbjct: 36   LDEYRTKYDAMMQLKPLKENITTLEDKEVPELKNKL---KKINEDITKLREDIQTKEEDL 92

Query: 692  EVLVQPVETADRLFQEIQL---WQKQVDDLEYMLDSRGQGV------RTMEEIQLELSGS 742
                Q  E+A ++  +I +   +Q +V +LE  + + G  +      RT++++  E    
Sbjct: 93   HTQEQDDESAKQIQPDIVMMDRYQGEVTELEKKISTEGAKLSGGDSDRTLQDVINEKEDL 152

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLM 802
                D+   +L+ LR +      ++  ++   + L  EK++  + L+   K EE+    +
Sbjct: 153  QLKVDSSNKQLDSLRQKINLYTEEVQRLKSEVNQLTSEKLQIDSDLQQRNKLEEDKAKSL 212

Query: 803  EEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN----FQQEI 858
             E  Q +   K +      L +EKEK+L           +E EEQ E   N     + + 
Sbjct: 213  SENDQYN---KEIMNQLEKLKREKEKIL-----------QEKEEQMEHMKNEVDRVKNDT 258

Query: 859  EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQ 918
              +  +  +IK Y    K E  +E +++ +Q E +    +  + +    L++ +D +   
Sbjct: 259  AKVKNVNLEIKNYNQSGKAELLEENKKRLTQIEEKAAEKEEESKDYTASLNKLRDELAKN 318

Query: 919  DQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVST--FETELGKHLLERDRLL 976
             +  R + DNL  R     ++K    I  LE    ++GG+     E E  + + E+  LL
Sbjct: 319  AERERELTDNLRLRRHLQDIEKKKESIAKLES---ELGGIDAKHLERERRRLMAEQQELL 375

Query: 977  SEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNAL 1036
             E    +         +S    +LK   YK+   +  D++I LKTTE+A+ DL++YY AL
Sbjct: 376  KEKQLSENRRMALHGELSSLLSELKSDMYKNAGTKFRDKMIVLKTTELASSDLEKYYKAL 435

Query: 1037 DKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQ 1092
            DKA+M +H MKM+EINKIIRELW+ TY+G DI+ I I SD + AG     R+Y+Y+V+M 
Sbjct: 436  DKAIMSYHNMKMDEINKIIRELWRNTYKGNDIETIEIRSDEDEAGLMKARRTYNYRVVMI 495

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
             GD  L+MRGRCSAGQKVLASLIIR+ALAETFCLNCGILALDEPTTNLD  N ESLA AL
Sbjct: 496  KGDTALDMRGRCSAGQKVLASLIIRMALAETFCLNCGILALDEPTTNLDRENIESLALAL 555

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
              I++ R  Q+NFQL+VITHDE F +L+G+  + +++++V KD
Sbjct: 556  VEIIKSRSSQKNFQLVVITHDEDFVELLGRSDYVDEFWKVRKD 598


>gi|380491100|emb|CCF35557.1| DNA repair protein RAD50, partial [Colletotrichum higginsianum]
          Length = 778

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 226/791 (28%), Positives = 405/791 (51%), Gaps = 31/791 (3%)

Query: 431  RVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDD 490
            R +L L+K EL + ++K + + + +K K+ DV  G       L+ +   AL+       D
Sbjct: 1    RAQLDLRKKELSDRRRKLETLTNTWKPKL-DVHVGTAWQTDTLEAQFNDALKRQNKVVAD 59

Query: 491  LSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKV 550
               K   A  +   +  K++   D  +K   +    +  + + L+++     +ID Y++ 
Sbjct: 60   ARQKRDLARDKQQKVDFKLKSAKDVGAKKTDESQRCRSAVVAALQAVRDGA-TIDDYEEE 118

Query: 551  LDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVK 610
            +   +E  +   +  ++ D +   +   +++ +  + C  C+R F   ++   V K R  
Sbjct: 119  VKMHEEDVETYTTDISLLDALADYYRGCQKMLQEKNKCRLCDRVF---DDKSNVSKSRF- 174

Query: 611  AASSAEHMKVLSLES--------SNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHE 662
               S + +K L            +N+ +    L K++  YE Y +L  E +P  ++ +  
Sbjct: 175  ---SDKLVKFLDPNKKEKAEEDLANSTALLNALRKVKKQYETYQRLMAE-LPSVKEEVAS 230

Query: 663  LTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYML 722
            L  E +   +  ++   V++  +     +E L + V    +  ++I+  + QVD +    
Sbjct: 231  LEAEFETLGRQLEEHDAVVSAEEGKLNDIESLNKTVINITQAVKDIKDSEAQVDRI-MSQ 289

Query: 723  DSRGQGVRTMEEIQLELSGSLSTK-DNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEK 781
             S G   R+ ++I  EL  S + +  + +N+L K   +++ M++ ++ +++    LR + 
Sbjct: 290  QSSGTVSRSADDIH-ELQASCNEQIRSTKNKLSKTTSDRQRMKDQVNALELEKSELRNKL 348

Query: 782  VKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLS--DYNDLKVK 839
             KA N L   K  + +++ L E++       +L+++A   L   + ++       D  ++
Sbjct: 349  SKALNQLERKKDFQNQIQTLKEDQAH---QRELISQADQELESIEPEIAEARSIRDDTLQ 405

Query: 840  LNREYEEQ-AEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCK 898
              R  E+  AE++      +  L  + S I++Y D          Q   +  E  + +  
Sbjct: 406  RGRAKEQAIAEERDKVADSVTELKMVESDIRDYIDRGGPSNLAANQRAIASLEKSIAALD 465

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
                ++ V  ++ K  + N D+ ++NI +NL YR+   +++    +IE LE R       
Sbjct: 466  KEISDLTVRTNKLKQDIDNGDRKKQNISNNLKYRQNLQQLEILRRDIEELESRDAD-EDY 524

Query: 959  STFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQ 1018
             +  TE  +     +RL+++     G M   +       +   + +YK   K++ +  I+
Sbjct: 525  KSLITEARQLENRHNRLVADRGSIMGQMKT-KDEELERLLLEWEQEYKSAAKKYRESHIK 583

Query: 1019 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE 1078
            ++TT+ A +DL RY +ALD A+MR+H++KMEE+N+I  ELWQ TY+G DID I I SD+E
Sbjct: 584  VETTKAAIEDLGRYISALDTAIMRYHSLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNE 643

Query: 1079 GA--GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
             A  G RSY+Y+V M   D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEP
Sbjct: 644  NATTGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEP 703

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N +SLA +LH I++ R+ Q NFQLIVITHDE F + +      + ++RV +DD
Sbjct: 704  TTNLDKDNIKSLAESLHAIIKARQAQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVRRDD 763

Query: 1197 HQHSIIEAQEI 1207
             Q+S+I  + I
Sbjct: 764  KQNSVITKESI 774


>gi|348687250|gb|EGZ27064.1| hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae]
          Length = 1369

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 220/667 (32%), Positives = 346/667 (51%), Gaps = 102/667 (15%)

Query: 586  HVCPCCERPFSAEEEDEF--VKKQRVKAASSAEHMK-VLSLESSNADSYF---QQLDKLR 639
            H CP CER  + EEE  F  +   +      A+ +K    LE S  ++     QQ+   R
Sbjct: 730  HCCPLCERDMTPEEEQAFEAILSDKTDDGKVADKIKKAEELERSTLETLTGIKQQMPSWR 789

Query: 640  MVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVE 699
                ++++L + TIP   + ++EL +E+    +A ++  GVL +    K ++E++ +  E
Sbjct: 790  ----KWLEL-ETTIP---QKVNEL-QEIYAAQKALEN--GVLDK----KTALELIQEKFE 834

Query: 700  TADRLFQEIQLWQKQVDDL----------EYMLDSRGQGVRTMEEIQLELSGSLSTKDNL 749
             A     E+   +K  D+L          E M  S+G G R++ +++ E       KD  
Sbjct: 835  DAKVAKTELDSLRKTADELHMSDMTITREERMKASQGMGGRSLADVEAE-------KDAK 887

Query: 750  QNELEKL-RDEQR-------------YMENDLSNI---QIRWHTLREE---KVKAANTLR 789
            Q EL++L R  QR              ++NDL N    ++R  T R+E    +K  N LR
Sbjct: 888  QAELQELNRQVQRKQRELDHTNEILQQLQNDLHNRREEKLRMETQRKEYDDAIKEQNRLR 947

Query: 790  D-----------VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKV 838
            D           +KK+E ELEH  E + +    E   A A   +  ++ +L     D +V
Sbjct: 948  DQEKTLKDACSKLKKSEPELEH--EVRSKTTERETHRAAAREQMRAQRTELQERQGDFRV 1005

Query: 839  KLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCK 898
              ++  + Q  +    ++E++ L    +  K+    R+D   + L +   Q +S  K+  
Sbjct: 1006 FSDKCKQVQRGELEKLEREVQTLSDNIAHTKQ----REDTAIQSLADLVPQMKSAEKN-- 1059

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
            +  +EI                ++R+I+DNL+YR  + +++K  +E+E L+  V  +  +
Sbjct: 1060 LSKNEI----------------VKRHIQDNLDYRALQKELEKLRAEVEDLKATVGNLPAL 1103

Query: 959  STFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQ 1018
                  +    +             G        I  NK++L+    KD+++++  +LIQ
Sbjct: 1104 DDVNDRVESASMALIAAKESRAVVSGKKQQLMAQIRENKVELRVPNLKDVEEKYRHKLIQ 1163

Query: 1019 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE 1078
             +TT+MA  DLDRY+ ALD++L+++H+ K+EEIN IIR LWQ TY+GQDID I + S  E
Sbjct: 1164 FETTQMAVADLDRYFKALDESLLQYHSRKVEEINTIIRSLWQITYKGQDIDTIELVSGHE 1223

Query: 1079 GAGT----RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1134
               T    RSY Y+V+M+   A ++MRGRCSAGQKVLA+L+IRLALAETFCLNCGILALD
Sbjct: 1224 QGVTAKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALD 1283

Query: 1135 EPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ-----HAEKY 1189
            EPTTNLD  N   LA A+  I+  R  Q+NFQL+ ITHDE F Q++ + Q       E Y
Sbjct: 1284 EPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSRTQTMDGTRPEYY 1343

Query: 1190 YRVAKDD 1196
            +R++++D
Sbjct: 1344 WRISRED 1350


>gi|322778931|gb|EFZ09347.1| hypothetical protein SINV_80256 [Solenopsis invicta]
          Length = 1374

 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 327/1285 (25%), Positives = 599/1285 (46%), Gaps = 163/1285 (12%)

Query: 3    YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
            +K ++S +   +    +K  ++ RCA++D E+   +GVSK+IL  VIF HQDE NWP   
Sbjct: 114  FKTLDSTITRYSRDKQQKTSITGRCANIDTEINIALGVSKSILNYVIFCHQDELNWPFDS 173

Query: 63   PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
               LK++FD+IF + R+ KALE I KL K+   +IKT   + +  + L          + 
Sbjct: 174  GKVLKERFDEIFDSARFNKALEAILKLQKELQGDIKTLNAEKQTYKVLVSEVEGKENKLK 233

Query: 123  QDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK 182
            + +++ +A K ++ E+ K ++ +  KI   + +  +   +Q +      ++   +   + 
Sbjct: 234  EHKKRLDATKEKVSEINKQLEPVKQKIEEVQQSHTEYNNVQIE----EEKKKMEYSMHRD 289

Query: 183  QYAALAEEI----EDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNID 238
            +Y  L E I    E+T EEL     ++E ++  + ++I++ E E   +  K   +   + 
Sbjct: 290  RYTKLKENIKNIFEETTEELNTRIESYETVLKDKNNEIAENEAEVKGISEKGNRISNILA 349

Query: 239  AYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSL-PNAPFSNEAALNFINRIRSR 297
                 +  L  +   H  R+  R+  +       +  ++ P+       AL    R+  +
Sbjct: 350  TRRETVGTLKQQVKDHERRLVRRNQLLNNALQAWDFDTVEPDVSEIEVKALT--KRLEEK 407

Query: 298  LSDLERDLEDKK---KSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKH--IK 352
            +  LE+++E  +   +S E  L+   D+ L +N  +  IE++K         ILK   I 
Sbjct: 408  MRMLEKEVEKNRLAMQSKEKELQKEVDT-LRSN--YSKIESEK---------ILKEQDIT 455

Query: 353  EKENERDSFELQISNLN-----LSHIDERENKMRIEVERKTNQLAEREFEINIRQK---- 403
            E  +E ++   QI+ +      L  I+++    +  ++  +  L     + +I +K    
Sbjct: 456  EIRDEINAIRNQITQIGAAGNKLKSIEQKLQTAKQRIDELSGALNVDSVKADIAEKIKSR 515

Query: 404  ---QSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIR 460
               ++ L A+D +I +L++   + A     +  L  K+ ELEN K+KH        D I+
Sbjct: 516  DKIETSLNAIDDEISSLHKLSSLTAEFELKKSALQAKEEELENLKRKHG-------DSIK 568

Query: 461  DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
             +L               Q L  +  + D L    ++ +KE N L  +IQ      ++ R
Sbjct: 569  VLLN-------------IQELEQIKLK-DTLERIHQKLEKETNALTREIQ------TQER 608

Query: 521  KDV--DSKKRFIESK-------LESLNQQIFSIDTY----QKVLDSAKEKRDVQKSKYNI 567
            K    ++  R IE++       L +  Q++ ++  Y    + +L  +   +D+Q  +   
Sbjct: 609  KTTAFETTARHIETEIKKKTLELHNDKQKVSTVCDYKDFDETLLFQSTIIKDLQNKRGIY 668

Query: 568  ADGMRQMFDPFERVARAHHVCPCCERPFSAEE---------EDEFVKKQ--RVKAASSAE 616
            A       +   +++  +  CP C R F  E+         E++ ++ Q  R+K+     
Sbjct: 669  AHQALAYKEYVAKLSLKNPCCPLCHRNFEKEDTVANLIEEIENDIIRSQPDRLKSCE--- 725

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDD 676
              + L  E    D+  Q    L+ + E  ++  +  +   E+ L +    + +      D
Sbjct: 726  --RELGKEQEKYDNMLQ----LKPIVENIIRCEENDLKRLEEKLKKTQNSVAESKITVKD 779

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG-QGVRTMEEI 735
            +    A+ +      + ++  ++  DR   EIQ  ++ V++LE  + + G +  RT+EE 
Sbjct: 780  LETSKAEPEKKLLLYKSIIGDIKFWDRCIDEIQQLKRGVNNLEAKMANAGIKTERTIEEA 839

Query: 736  QLE---LSGSLSTKDNLQNEL--------EKLRDEQRYMENDLSNIQIRWHTLREEKVKA 784
            Q +   L  SL    NL + L        E+L+D  R M N+L   Q++ H+        
Sbjct: 840  QTQRESLRTSLRETRNLIDALQLKLNKHNERLQD-ARAMYNELHEEQLKIHS-------- 890

Query: 785  ANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL---N 841
                 D++K    L+HL +++  L   E  + E         EKL  D    + +L   N
Sbjct: 891  -----DMQK----LKHLKDKQEDLYARELTIGETM-------EKLRKDLALAETQLESRN 934

Query: 842  REYEEQAEQKINFQQE------IEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVK 895
            R+ E+   +  N+Q++      I    +  S + E  D         + EK +  E E++
Sbjct: 935  RQLEKTKTE--NWQKQEADRKSISESARRLSDLHEILDYINSFINSNVLEKLANYEREIE 992

Query: 896  SCKIRTDEILVE-------LDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESL 948
            + K    E++ +       + + K+ + +Q+  +R + DN+N R+ K  ++    +   L
Sbjct: 993  TYKNSLTELMNKKNDIEQAISKLKEDIASQEIGKRELLDNINLRKIKETLETLKEQYRKL 1052

Query: 949  EERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDI 1008
             E+ LK         +  +   E+  LL + N   G     +  I +   +L++ +Y+  
Sbjct: 1053 NEK-LKNMDYKEIMKKWDQLENEKQALLRQKNVALGNQEELERVIKQYTHELQKEEYRLA 1111

Query: 1009 DKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1068
             + + ++ I+L   E    +L  Y   LD A++ +H  +M  +NKI+R+LW+  Y+G D 
Sbjct: 1112 RRNYNNKCIELTVQEDTIANLKAYNKILDVAMIEYHEERMSTVNKIMRKLWKHVYKGTDT 1171

Query: 1069 DYIRIHSDS--EGAGTR-SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFC 1125
              I I ++   E A  R SY YK++      +++MRGRCSAGQKVLAS+IIRLALAETFC
Sbjct: 1172 SSIEICTEPTKETANNRRSYCYKLMQTKHGCKMDMRGRCSAGQKVLASIIIRLALAETFC 1231

Query: 1126 LNCGILALDEPTTNLDGPNAESLAAALHRIMEDR-KGQENFQLIVITHDERFAQLIGQRQ 1184
             NCGILALDEPTTNLD  NA+SLA  L +++E R K Q+NFQLI+I+HDE+F Q +    
Sbjct: 1232 KNCGILALDEPTTNLDEENAKSLADMLTKVVELRSKHQKNFQLIIISHDEKFLQKLADLN 1291

Query: 1185 HAEKYYRVAKDDHQHSIIEAQEIFD 1209
            + ++++ + +   +H+ + A  I D
Sbjct: 1292 NNKQFHELYR---KHNGMTAVRICD 1313


>gi|358331647|dbj|GAA50423.1| DNA repair protein RAD50 [Clonorchis sinensis]
          Length = 1112

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 236/786 (30%), Positives = 382/786 (48%), Gaps = 111/786 (14%)

Query: 483  ALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKD---VDSKKRFIESKLES--- 536
            + LT    L   +REA K               L+K+ +D   +++K +F  S+L+    
Sbjct: 348  SFLTRLSSLEQSTREARK--------------RLAKYEQDKSVLETKAKFTRSQLQGKQK 393

Query: 537  ----LNQQIFSIDT---YQKVLDSAKEKRDVQKSKYNIADGMRQMFDPF-ERVARAHHVC 588
                + ++I S       ++ L   +++R + + +     G   ++  F +R+AR+   C
Sbjct: 394  QADQMAERILSAAGSADLEQCLSKLQQRRKLLEEECANEQGSLYLWSKFRDRLARSDPDC 453

Query: 589  PCCERPFS-AEEEDEFVKK--QRVKAASSA-EHMKVLSLESSNADSYFQQLDKLRMVYEE 644
            P C R  S   E+DE + +  QR+++     E  KV   E +   +  + L +LR +Y E
Sbjct: 454  PVCHRQLSDRSEQDELLAELDQRIESMPGEFERKKV---ELAQLVTQHETLLELRPIYSE 510

Query: 645  YVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL 704
               L    IP  E  L+   E L       +     L    AD    E L + ++     
Sbjct: 511  LEHLRNTDIPALEAQLNTELENLQTARDNSEQETARLEACHAD----EALARSIQG---- 562

Query: 705  FQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYME 764
              ++ ++++  +D+   ++  G+  R   E    + GS  T D LQ E   LRD+Q  + 
Sbjct: 563  --DLAVFERMENDI---IELSGKIARLQAESGETVEGS-ETMDALQEERRTLRDKQISVT 616

Query: 765  NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEH-------LMEEKGQLDLDEKLLAE 817
            ++++ +Q     L E +  A +T+  +K    +LE        L ++  +L   EK L +
Sbjct: 617  SEMTKLQDCVQQLDEAQRDATDTVHRIKDNLHKLEQENQANLRLTDDIARLSDTEKQLQK 676

Query: 818  -----ASGPLSKEKEK---LLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIK 869
                  S  L K K+     +S+         +E EE AE+    +  I  + +  + + 
Sbjct: 677  RLQELESHELPKAKQAKHIAVSERTAGSATREKELEESAEKTGKLRDLIRQVDQACAAVS 736

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
                +    +  +LQ++ +  E  +       +    +L+  +  V      +R + D +
Sbjct: 737  TASKVGSKHKLAQLQQQLTNLEQNIAHLHGVAERNTKDLEIARQQVHEHKIRQRELTDCV 796

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQ------ 983
              R+ ++++ +    IE L  R+     V+  + +L +   E  RL SE  R Q      
Sbjct: 797  QLRQLRSQMGQLTLRIEDLSNRLASCHSVTGTDQDLVQ---ETKRLSSEEERLQAEKHAV 853

Query: 984  ----GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
                G ++     + R   DLK+ +Y + D+ + D + QLKTTE+A  DL+RYYNALD+A
Sbjct: 854  TNQLGQLTAKLQYLER---DLKE-KYAESDREYLDMMYQLKTTELACSDLERYYNALDRA 909

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT--------RSYSYKVLM 1091
            ++ +H  KM ++NKIIRELW+ TYRG DIDYI I S+ E A          R+Y+Y+V+M
Sbjct: 910  ILAYHAAKMSDLNKIIRELWRSTYRGNDIDYIEICSEEEAATAASNATRSRRTYNYRVVM 969

Query: 1092 ----------------------QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCG 1129
                                  Q+ +A L+MRGRCSAGQKVLASLIIRLALAE FCL+CG
Sbjct: 970  VKATGGVAAPTASSRAAKSKLVQSYEARLDMRGRCSAGQKVLASLIIRLALAEVFCLHCG 1029

Query: 1130 ILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKY 1189
            +LALDEPTTNLD  N ESLA AL  I++ RK Q+NFQLIVITHDE F +L+G+    E +
Sbjct: 1030 VLALDEPTTNLDRENIESLAYALVEIIKSRKQQKNFQLIVITHDEDFVELLGRSDFVEHF 1089

Query: 1190 YRVAKD 1195
            + ++++
Sbjct: 1090 FMLSRN 1095


>gi|407920745|gb|EKG13927.1| Recombination/repair protein Rad50 [Macrophomina phaseolina MS6]
          Length = 1305

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 221/745 (29%), Positives = 384/745 (51%), Gaps = 80/745 (10%)

Query: 500  KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDT---YQKVLDSAKE 556
            +E+  LQ K+  V   LSK   +       ++   E L+Q +   +T   + + L++A +
Sbjct: 600  RELEQLQFKLNSVKTELSKKHSE-------LKINAEHLDQILADEETPEDFPEALNTATK 652

Query: 557  KRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPF--SAEEEDEFVKKQRVKAASS 614
              ++ +    ++  M + F       R H +C  C R F  +  E   F K+   K   +
Sbjct: 653  SVEIAQRDVALSGTMEKFFTDCLETFRKHDMCQLCYRGFKQNDPERPRFPKRLEAKIQQA 712

Query: 615  AEHMKVLSLESSNADSYFQQLDKLR---MVYEEYVKLSKETIPVAEKNLHELTEELDQKS 671
             +     +L+   A+     L+KLR     Y  +V+L  + IP  E  L +L    +   
Sbjct: 713  VDENFEQTLKEHQAE-----LEKLRGAQPAYNTWVRLKSKEIPELEAMLRDLESRRESLV 767

Query: 672  QAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRT 731
            +  +     + + +  K  V+ + Q V       + I+ ++ ++++L       G   R+
Sbjct: 768  RVIEGQDERVVECRGLKRDVDFITQNVTAIIEDVKAIRGYEAEIEELSQKQQHSG-TFRS 826

Query: 732  MEEIQLEL------SGSL-STKDNLQNELEKLRDEQRYMENDLSNIQIRWHT----LREE 780
            +E+IQ+++      S ++ +T   L  E+++ R++ R +EN++ +++    T    LRE+
Sbjct: 827  IEQIQVDIQRVNDQSKTIKNTITQLSKEMDRSREKIRRLENEVRDVRAEITTAVYALREK 886

Query: 781  K--VKAANTLRD--------VKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLL 830
               +  A   R+        +++ ++ELE         DL  KL            E+  
Sbjct: 887  NGLISQAGDRRNQNTERREFIRQTDQELE---------DLFPKL------------EQAQ 925

Query: 831  SDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD-------LRKDERFKEL 883
            +  + ++ + +++ +E  E +      ++ L K +++I  Y +           +  + L
Sbjct: 926  AKCDAIQTRGDKKEQEIQETRKKITDSLDSLRKASAEINAYLENGGTGQLTTARQELENL 985

Query: 884  QEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFAS 943
            Q +K Q E E K       ++  ++++ K+ +RN    RR I+DNL YR +  K++    
Sbjct: 986  QAEKQQLEKEQK-------QLTSDINKIKEQLRNHTDTRREIQDNLRYRISLRKLEAVRQ 1038

Query: 944  EIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQA 1003
            +I+ LEE   +       + E      +R+RL +E     G        + R  ++    
Sbjct: 1039 QIQELEEHNAE-ADRDRCQKEANAWQRKRERLAAESATLVGEARTKDEQLKRF-LEEWDT 1096

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
             YKD  K + +  I+++TT+ A +DL RY  ALDKA++++H++K+EEIN+II ELW++TY
Sbjct: 1097 DYKDAAKNYKEAHIKVETTKAACEDLGRYGGALDKAIVKYHSLKLEEINRIIEELWRKTY 1156

Query: 1064 RGQDIDYIRIHSDSEGAG-TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAE 1122
            +G D+D I I S++E +  TRSY+Y+V+M   DAE++MRGRCSAGQKVLAS+IIRLALAE
Sbjct: 1157 QGTDVDTIMIRSENETSNKTRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIRLALAE 1216

Query: 1123 TFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQ 1182
             F +NCG++ALDEPTTNLD  N  +LA +L  I+  R+ Q NFQLIVITHDE F + +  
Sbjct: 1217 CFGVNCGLIALDEPTTNLDRDNIRALAESLAEIIRVRRQQSNFQLIVITHDEEFLRYMQC 1276

Query: 1183 RQHAEKYYRVAKDDHQHSIIEAQEI 1207
             + ++ YYRV++++ Q S IE Q I
Sbjct: 1277 AEFSDYYYRVSRNEKQKSTIEKQSI 1301


>gi|405123859|gb|AFR98622.1| telomere maintenance protein [Cryptococcus neoformans var. grubii
            H99]
          Length = 927

 Score =  266 bits (680), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 267/909 (29%), Positives = 442/909 (48%), Gaps = 101/909 (11%)

Query: 360  SFELQISNLNLSHIDERENKMRIEV-----ERKTNQLAEREFEINIRQKQSELFAMDQKI 414
            S EL+++   L+ ++   +K ++E+     + K NQ       + IRQK+ E   +  ++
Sbjct: 56   SVELELNQDKLTELEADLSKFQVEIADAKYDEKINQKG-----LLIRQKELERDNISAEL 110

Query: 415  KALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
              LNR+ D        R KL L++ ELE    +   ++  ++ K R++++  +    D+K
Sbjct: 111  AVLNRKAD-------SRAKLDLQRNELEGKNSQISTLLKTHEAKFRELVEADI---HDVK 160

Query: 475  KE---------ITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDS 525
             E         I++  R L+ E +  S+ +R+     + +Q  +    + L+  ++++ +
Sbjct: 161  PEDIEDKVISAISRKDRDLIQEENGASALNRD----YSQVQASLSRAREELAIKKREIHN 216

Query: 526  KKRFIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYN-----IAD--GMRQMFDPF 578
             +R IE+ + ++NQ     +   +      E  D+ +S+       I D  G R +++  
Sbjct: 217  MQREIEAAIYNVNQPAEGEEVPAEEAKDLAEAFDICRSEIETVQRAIMDKQGSRVVWEGL 276

Query: 579  ERVARAHHVCPCCERPFSAEEEDEFVK--KQRVKAASSAEHMKVLSLESSNADSYFQQLD 636
                +   VC  C R    EE++   +  + +++    AE   V   E     S+ + LD
Sbjct: 277  LTTVKTGGVCEACNRGIKHEEKNAVTRHMEAKIRQLMEAEQAGV-DAEIEVEKSWTEILD 335

Query: 637  KLRMVYEEYVK---LSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
             L  V     K   L +  IP  E  + E  E+L    +  DD    + ++K+    ++ 
Sbjct: 336  TLIRVEPHEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKEVDDSKTSIQKLKSASRDLQN 395

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNEL 753
            L       +RL+ E    +  V  L+  L+S G   +T+EE+Q E+         L  E 
Sbjct: 396  LKATASYINRLYIEAGDLKANVKRLQTELESSGNS-KTVEEVQKEVDRVSQEIKTLSREQ 454

Query: 754  EKLRDEQRYMENDLSNIQ--IRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL--- 808
            + L  E+    N L   Q  I   +L   ++KA   L   K  EE L  +    G L   
Sbjct: 455  QALTSEKELKVNALRATQDEIGRKSLHIGRLKA--QLDKRKMEEEALSDMQNTLGALHDE 512

Query: 809  --DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIA- 865
              DLD+ + A A  P  KEK + L  +   +    +E   Q     +   EIE   K   
Sbjct: 513  LQDLDQTVHA-AEAPW-KEKNETLGRFRTERANTEKEASTQVRTYQSSLGEIEGKHKACQ 570

Query: 866  SKIKEYYD--LRKDE-RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIR 922
            + + E  D  +R++E    E++ + SQS S++++       +  E+      +   + ++
Sbjct: 571  AYVAEGNDRKIRENEIAMSEIKRQISQS-SDLRAA------LEAEISSLSSELSKSESLK 623

Query: 923  RNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRC 982
             NI  NL YRE   K++   +E++ L+        + +      K   E   +L E    
Sbjct: 624  ANIRSNLKYREDGKKIEMVQAELDELD--------LDSAAESRAKFNKEYKGMLDEETEA 675

Query: 983  QGTMSVYQTNI-----SRNKIDLK-QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNAL 1036
            QG M++ Q  +     +R K++   +  YK+IDK H +QLI+   +E AN DL++Y  AL
Sbjct: 676  QGLMAITQGGLLEMRANRQKMEKSLKMDYKNIDKEHKEQLIKTTISEYANNDLEKYGKAL 735

Query: 1037 DKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RSYSYKVLMQT 1093
            D A++++H++KM+EIN  I  LW +TY+G DID IRI SD + A T   +SY+Y+V+M  
Sbjct: 736  DNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTSTRKSYNYRVVMVK 795

Query: 1094 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE---------------PTT 1138
             + EL+MRGRCSAGQKVLAS+IIRLALAE+F   CG+LALDE               PTT
Sbjct: 796  NEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDESVLPLRDRNRADRSRPTT 855

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  N  +LA +L  I+ +R+ Q NFQLIVITHDE F Q + ++   E Y+RV++D  Q
Sbjct: 856  NLDQENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDASQ 915

Query: 1199 HSIIEAQEI 1207
             S++E Q +
Sbjct: 916  KSVLERQRV 924


>gi|224008570|ref|XP_002293244.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971370|gb|EED89705.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1403

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 198/675 (29%), Positives = 349/675 (51%), Gaps = 75/675 (11%)

Query: 571  MRQMFDPFERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKA-ASSAEHMKVLSLESSNA 628
            + ++  P ++  +    CPCC R F   +E   F+ +        ++E M+++S ++  +
Sbjct: 737  VSRILKPLKKKGKTDASCPCCLRDFVDMDETTRFMNQMNALVDPDTSELMEMISKKNKES 796

Query: 629  DSYFQQLDKLRMVYE-------EYVKLSKE-----TIPVAE-----KNLHE----LTEEL 667
                ++ +K R           EY  ++ E         AE     K+L +    L E+L
Sbjct: 797  TESLERFEKWRTAIAQNINECIEYTGVNNEIKDLEAFIAAEGEGELKDLQDQDQSLKEKL 856

Query: 668  DQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF-QEIQLWQKQVDDLEYMLDSR- 725
             +K +    +  +LA +             ++TA R++ +E Q+ +K+ + L+Y      
Sbjct: 857  SEKQKEASSLRTLLASLNT----------ILDTARRIWTKEGQVKEKK-EKLKYAFGYAD 905

Query: 726  -GQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEK 781
             G   R +  ++ +L+ S   K+    E+ +L  EQ+ + + +S +  +         EK
Sbjct: 906  LGNETRDLNTVEADLTKSNDAKEAAYTEINRLNGEQKDINDKISRVTNQAAAADRNAREK 965

Query: 782  VKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLN 841
              A    ++  K  +EL  L+   G+L  D+K L ++  P+     +  SD + ++    
Sbjct: 966  QDAFTRDQEASKRRDELNQLL---GKLGDDDKELEKSLAPIRTHLLQKESDRDRMRTANG 1022

Query: 842  REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT 901
             E  +  E+   F+++I  L +I  KI  Y +  K+    +++   +++   +K  + + 
Sbjct: 1023 YEESKLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENADAIKDEEAKL 1082

Query: 902  DEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTF 961
              +  E+++ K  V + ++ ++ I++N++  + + +V+    EI  LE+    +GG    
Sbjct: 1083 VSMKPEIEQLKKQVDDSERQKQKIQNNIDVLKLQKEVNDMEEEIGKLEDDAKDMGGEDAA 1142

Query: 962  ETELGKHLLERDRLLSEVNR-----------CQGTMSVYQTNISRNKIDLKQAQYKDIDK 1010
                        R+L+E N             +G   +        K  L + +YKD+++
Sbjct: 1143 ------------RILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEE 1190

Query: 1011 RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1070
            RH  ++I+ +TT +   DLD+YY+ALDKAL+R+H MK+ +INKII+ELW  TY+G+DI  
Sbjct: 1191 RHRVKMIEYETTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITN 1250

Query: 1071 IRIHSDSEGAG--TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
            I+I SD + AG   RSY+Y+++M  G+  ++MRGRCSAGQ+VLAS++IRLALAETFCLNC
Sbjct: 1251 IQITSDQDKAGRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNC 1310

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR----- 1183
            G++ALDEPTTNLD  N   LA AL +I+  R  Q NFQL+VITHDE F  ++        
Sbjct: 1311 GVMALDEPTTNLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQT 1370

Query: 1184 --QHAEKYYRVAKDD 1196
                 E+YY+V++++
Sbjct: 1371 GFNMPERYYQVSREE 1385


>gi|396481312|ref|XP_003841209.1| similar to DNA repair protein rad50 [Leptosphaeria maculans JN3]
 gi|312217783|emb|CBX97730.1| similar to DNA repair protein rad50 [Leptosphaeria maculans JN3]
          Length = 1321

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 321/639 (50%), Gaps = 24/639 (3%)

Query: 581  VARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
            VA   + C  C R    +  + F     +            +++  NAD  F +L+  R 
Sbjct: 676  VAERDNCCRLCMRTLRDDRSEGFTTAGFISKLKEIIRKAKANMQGDNADEIFAELEAARN 735

Query: 641  V---YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
                YE   +L    +P  + N+ +L  + D  +   +    ++ +++A+K+ VE L + 
Sbjct: 736  AKPSYELATRLRDTDLPAIQANIAKLINDRDAVNVELEKWDSLIYELEAEKQEVESLSKE 795

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLR 757
            V+T    F      + Q+ +L     + G   R ++EIQ++L        N + +L++L 
Sbjct: 796  VQTIVGYFNRACELEDQIKELSQKQKAAGLS-RGIDEIQVDLKKVTEDTRNARAKLDELT 854

Query: 758  DEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAE 817
              +    N ++ +++    +  E   A + L++ +   E +E   +E  +L  ++     
Sbjct: 855  TAKDKSRNLITTLELSVRDVNAELHLAQSKLKEKRALAERIEEFKKENSKLREEKHGFDN 914

Query: 818  ASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKD 877
                L  E E+    Y D+  + N   +   ++       +  L +   +I  Y      
Sbjct: 915  EMERLVPEIEQAQYKYEDINRRSNDRVQRAHDEASKLSDSLRQLTQANQEIDAYVKRGGP 974

Query: 878  ERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAK 937
            ++             E++  +    ++  ++ + +D +R+ + ++R+I DNL +R+ K  
Sbjct: 975  QQLTRTHRDIENLHGEIERIQAEMTDVTRKIKKIEDTMRDTEMMKRSISDNLRFRKAKRS 1034

Query: 938  VDKFASEIESLEERVLKIGGVST----FETELGK-----HLLERDRLLSEVNRCQGTMSV 988
            ++    EIE LE       G       +E E  +     HLL  D++   + R       
Sbjct: 1035 LETLQVEIEKLEN-----AGAERDKEHYEREARQWDNRYHLLNTDKI--SLERDMKNKDD 1087

Query: 989  YQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKM 1048
              T +     +L    YKD  K++ +  I+++TT+   +DL RY  ALDKA+M++H +KM
Sbjct: 1088 QLTELMNEYKNL----YKDSAKQYREAHIKVETTKAVIEDLGRYAGALDKAIMKYHELKM 1143

Query: 1049 EEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            EEINK I ELW+ +Y+G D+D IRI SD +  G R+Y+Y+V+M   D E+EMRGRCSAGQ
Sbjct: 1144 EEINKAIAELWRNSYQGTDVDTIRIASDGDAKGNRTYNYRVVMVKQDTEMEMRGRCSAGQ 1203

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLAS++IRLALAE+F  NCG++ALDEPTTNLD  N + LA +L  I++ R+ Q NFQL+
Sbjct: 1204 KVLASIVIRLALAESFGTNCGLIALDEPTTNLDQQNIKGLAESLSEIIKVRRKQANFQLL 1263

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            VITHDE+F + +    + + Y+RV ++  Q S IE Q I
Sbjct: 1264 VITHDEQFLKEMNCADYTDMYWRVGRNMKQQSYIEHQNI 1302


>gi|169621967|ref|XP_001804393.1| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15]
 gi|160704664|gb|EAT78431.2| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15]
          Length = 1299

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 211/755 (27%), Positives = 381/755 (50%), Gaps = 79/755 (10%)

Query: 497  EADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDT---------- 546
            ++D +   L+   Q+     +   K+  S++   +SKL+ +N Q+ S+++          
Sbjct: 565  DSDWDPATLETSYQQTLSEKASKVKEATSRRDISQSKLDKINFQLSSLESQLKKKRSELR 624

Query: 547  -YQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERV--------------------ARAH 585
             Y++ +  A ++ D+  S +N  + + Q+   +E V                    AR H
Sbjct: 625  QYEQTVTKAIQRDDI--SDFN--ETLEQLEADYEGVSTDAAKFAANAEYMRSCLESARKH 680

Query: 586  HVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV---Y 642
            +VC  CER    +   +F  +       S       +++  N +   ++L++ R     Y
Sbjct: 681  NVCRLCERELHDDRSQKFTIEGFYSKLESIIAKAESAMKGENPEELLEELEQARNAKPSY 740

Query: 643  EEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETAD 702
            E  ++L    IP  + ++ +LT E +  ++  +D   ++ +++A+++ VE + + V++  
Sbjct: 741  ELALRLRDTEIPALQIDMSKLTSERENVNKQLEDQDSIVHELEAERQEVESMSKEVQSIV 800

Query: 703  RLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKL---RDE 759
              + ++   + Q+ DL     + G   R ++ +Q +L        N +N LE+L   RD+
Sbjct: 801  GYYNKVHELEVQIKDLAQKQKTAGLS-RGIDAVQSDLKTITDDSRNARNVLEQLTAARDK 859

Query: 760  QRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL-MEEKGQLDLDEKLLAEA 818
             R   N ++++++    +  E   A + L++ +     +E    E   Q +L      + 
Sbjct: 860  SR---NHITSLELSVRDINAELNNAQSKLKEKRALGARIEEFKTENNKQRELIRGYDKDI 916

Query: 819  SGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDE 878
             G L  E E+    Y+D+  + N   +   ++       +  L +   +I  Y      E
Sbjct: 917  EG-LVPEIEQAQYKYDDINRRGNERVQRAHDEASKLSDSLRQLSQADEEITAYIQRGGPE 975

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            +      +    + ++   +    +++ ++ + +D VR+ +  +R+I DNL YR+ K  +
Sbjct: 976  QLARTHREIENLQGDLARVESEMMDVMRKIKKIEDSVRDVEMTKRSISDNLRYRKAKRSL 1035

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERD-----RLLSEVNRCQGTMSVYQTNI 993
            +   ++IE LE                  H  ERD     R     +    +++  +T+I
Sbjct: 1036 ETLQADIEKLE-----------------AHGAERDQAHYTREAKHWDDQYHSLNTTKTSI 1078

Query: 994  SR---NKID-----LKQAQ--YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
             R   NK D     +K+ +  Y++ D ++ +  ++++TT+ A +DL RY  ALDKA+M++
Sbjct: 1079 ERDMKNKDDQLTELMKEYEDIYQNADHQYKEAHLKVETTKAAIEDLGRYAGALDKAIMQY 1138

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            HT+KMEEIN+II ELW   Y+G D+D IRI SDS+G G R Y+Y+V+M   D E++MRGR
Sbjct: 1139 HTLKMEEINRIIAELWTNAYQGTDVDTIRIASDSDGKGNRQYNYRVVMSKQDTEMDMRGR 1198

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLA L+IRLALAE F  NCG++ALDEPTTNLD  N + LA +L +I++ R+ Q 
Sbjct: 1199 CSAGQKVLACLVIRLALAECFGTNCGLIALDEPTTNLDQQNIKGLAESLSQIIDMRRKQS 1258

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NFQL+VITHDE F   +   ++A+ Y+R +K + Q
Sbjct: 1259 NFQLVVITHDETFLSAMNCSEYADHYFRESKIEQQ 1293


>gi|294892700|ref|XP_002774190.1| RAD50 DNA repair protein, putative [Perkinsus marinus ATCC 50983]
 gi|239879407|gb|EER06006.1| RAD50 DNA repair protein, putative [Perkinsus marinus ATCC 50983]
          Length = 548

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 197/309 (63%), Gaps = 19/309 (6%)

Query: 915  VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER--VLKIGGVSTFETELGKHLLER 972
            +R +++ R  +  N+  +  + ++ +F  E+E+L++   V+   G +    +L   +L  
Sbjct: 243  LREKERCREEVVQNIRLKSLQRELSEFEQEVETLQQEYGVVDFAGKAKQVEDLRSAVLS- 301

Query: 973  DRLLSEVNRCQGTMS--VYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
              L    +R +G +S  V Q     +++D   + YK+ID RH   LIQ + + MA +DL 
Sbjct: 302  --LREHKSRIEGKVSQLVDQQRAVSHQLD--SSLYKNIDDRHRSALIQHEVSAMATQDLS 357

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GAGT------- 1082
            RY++ALDKALMR+H  KM EIN++IRELWQQ YRG+DIDYI I SD+E GA         
Sbjct: 358  RYHSALDKALMRYHVSKMMEINRVIRELWQQVYRGRDIDYIAIRSDTEDGAANVTSATRL 417

Query: 1083 RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1142
            RSY+Y+V+M     E++MRGRCSAGQ+VLASLIIRLALAE+FC NCGILALDEPTTNLD 
Sbjct: 418  RSYNYRVVMTCQGVEVDMRGRCSAGQRVLASLIIRLALAESFCCNCGILALDEPTTNLDS 477

Query: 1143 PNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ--LIGQRQHAEKYYRVAKDDHQHS 1200
             N E LA AL  ++E R+   NFQL++ITHDE F +  + G     + YYRVAKD+   S
Sbjct: 478  TNIEGLADALADLIETRRNSSNFQLLLITHDEEFVRKLVTGPTHPCDYYYRVAKDNEGFS 537

Query: 1201 IIEAQEIFD 1209
             I    + D
Sbjct: 538  FIRQCNVID 546


>gi|453086676|gb|EMF14718.1| DNA repair protein rad50 [Mycosphaerella populorum SO2202]
          Length = 1307

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 339/644 (52%), Gaps = 36/644 (5%)

Query: 582  ARAHHVCPCCERPFSAEEEDEF----VKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
            A   H C  C R  SA  E E     VK Q+ K  +  ++ + L+      D+      K
Sbjct: 678  AENGHFCRTCARSVSAGPELETLLRTVKAQQQKYVAPVDNEETLAENIEALDN----AKK 733

Query: 638  LRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP 697
                 + + +L+++ IP  + ++ +L ++  + S+   D   V+ ++++ +  V    + 
Sbjct: 734  ASTYVDTWERLTQKEIPALKDDIRQLEQDSRKLSEEVADRNMVVKEVESTQRDVGTHKKT 793

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNL---QNELE 754
            VE    L Q+I+ +Q Q+ +L    +S G   R +E IQ ++  + + + +L   Q+   
Sbjct: 794  VEKIISLSQQIETFQHQIKELAAKQESAGLS-RGLEAIQADIKKADNKRKDLVAEQSAAT 852

Query: 755  KLRDEQRY----MENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDL 810
              RD ++     +E ++SN+      + E  +K    L + ++ +++ +   ++  +  +
Sbjct: 853  NARDRKKTAISALELEISNVNGELRRV-EYNLKQKTALAEQEQEQKDSKSDAQQHVR-GI 910

Query: 811  DEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKE 870
            D KL AE SG L+ ++E     Y D+  + +    EQ E+       +  L  +   IK 
Sbjct: 911  DIKLEAENSG-LNTQQEI----YRDITRRGDEADREQQEKANKLNNTVNKLNSVVQDIKA 965

Query: 871  YYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLN 930
            Y D   D +    QE +  +E+EV   +     I+ ++   +  +     ++R+I DN  
Sbjct: 966  YLDRGGDGQLARAQEAQRSAEAEVARIQSEQRHIIADIKELEQRIGTYAGMKRSIVDNQR 1025

Query: 931  YRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL-LERDR---LLSEVNRCQGTM 986
            +R    +++   ++I  LE R     G     + L K   L +DR   L S+     G +
Sbjct: 1026 FRRDFRQLEAVQADIAELEAR-----GAEADASRLNKQRELWKDRRNELASDQAGVIGEL 1080

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
                  ++  +  L Q++Y D  K++    I ++TT+ A  DL  Y+ ALDKA+M+FHT+
Sbjct: 1081 KGLDRELTEAQA-LYQSEYNDAGKKYQAAHIMVETTKAAINDLGLYWGALDKAIMKFHTL 1139

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHS---DSEGAGTRSYSYKVLMQTGDAELEMRGR 1103
            KME+IN+II ELW+QTY G D+D + I S   D    G +SY+Y+V+M   D E++MRGR
Sbjct: 1140 KMEQINQIIDELWRQTYMGTDVDTVLIRSEGVDGTARGNKSYNYRVVMVKQDTEMDMRGR 1199

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+IIRLALA+ F   CG++ALDEPTTNLD  N  +L  +L  I++ R+GQ 
Sbjct: 1200 CSAGQKVLASIIIRLALADVFGQQCGMIALDEPTTNLDINNIRALGKSLSEIIKIRRGQA 1259

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NFQLIVITHD  F Q +    + + Y+ V++D++QH++I+ Q I
Sbjct: 1260 NFQLIVITHDVDFLQYMNCGDYTDDYWLVSRDENQHTVIDKQNI 1303


>gi|325183051|emb|CCA17506.1| DNA repair protein RAD50 putative [Albugo laibachii Nc14]
          Length = 1272

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 207/653 (31%), Positives = 336/653 (51%), Gaps = 66/653 (10%)

Query: 586  HVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSY--FQQLDKLRMVYE 643
            H CP C+R  SA+EE  F++    +        K+L  E+   ++Y  ++ ++     + 
Sbjct: 643  HACPLCQRSMSAQEEARFLQFLSEQTHEDKVTGKILRAEAKEKEAYDRWKSIEANITSWN 702

Query: 644  EYVKLSKE-TIPVAEKN-LHE----LTEELDQKSQAFDDVLG----------VLAQIKAD 687
            E+ +L+   +    E N LH+    L+ ELD      D VL            L QI+  
Sbjct: 703  EWKRLNDSISAKTRESNELHDSTQSLSAELDILRSELDAVLREREQLEMHRRFLGQIQ-- 760

Query: 688  KESVEVLVQPVE--TADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQL-ELSGSLS 744
             E VE L    E  T+DR  + +   ++QV   E    ++   +R  ++ ++ E++  L 
Sbjct: 761  -ELVEDLCHLSERNTSDR--KRLTKAERQVVGAEVGSLAQVHTIRDAKQAEIQEINRHLQ 817

Query: 745  TKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEE 804
            +K   QN L+ +++    ++ND       +H  R+ K+       D + A+ +   L + 
Sbjct: 818  SK---QNHLQNVQEMLEQLQND-------FHAQRQSKLSMEQHRVDHEAAQAKQRALSDR 867

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQA--------EQKINFQQ 856
                   EK L ++   L  ++ KL  +  D K K    Y EQA        E+    Q+
Sbjct: 868  -------EKALCDSIAHLKSQEPKLARNVRD-KEKERHAYREQANDQLRALREELAALQE 919

Query: 857  EIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT-DEILVELDRFKDIV 915
            ++ +L   A  I     +      KE+ +K +  ++E +S +IR  D +  +++   + +
Sbjct: 920  DVHLLDAKADAISTQRKVDVQGELKEVIDKLTTIQTE-QSSEIRVLDNLQAQMNEMSEKL 978

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
              Q+  +R I+DNL Y   + ++D   +    L+E++  +  +   + EL          
Sbjct: 979  SRQENWKRQIQDNLEYHRLRRELDALNTTQSRLQEKIDALPLLQAIQRELSTRESSLSTC 1038

Query: 976  LSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNA 1035
             S++    G        +   +++L  +++  I++RH  +LIQ +TT +A KDL+ YY A
Sbjct: 1039 KSQIATLDGRKQQLDEQLHDFRVELCSSEFLGIEERHRQKLIQYETTMLAVKDLETYYKA 1098

Query: 1036 LDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-------RSYSYK 1088
            LD +L+++H+ K+EEIN IIR LW+ TY+GQDID I + S  +   T       RSY+Y+
Sbjct: 1099 LDHSLLQYHSKKIEEINSIIRTLWRITYKGQDIDTIELVSGEDTTETSVTFKAARSYNYR 1158

Query: 1089 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESL 1148
            V+M  G+  ++MRGRCSAGQKVLA+L+IRLALAETFCLNCGILALDEPTTNLD  N   L
Sbjct: 1159 VVMVKGNVSIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKYGL 1218

Query: 1149 AAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ-----HAEKYYRVAKDD 1196
            A A+  I+  R  Q NFQLI ITHDE F Q++ + Q       E Y+R++++D
Sbjct: 1219 AQAITDIIHARSSQHNFQLICITHDEEFVQMLSRTQMLDGSSPEFYFRISRED 1271


>gi|340370828|ref|XP_003383948.1| PREDICTED: DNA repair protein RAD50-like [Amphimedon queenslandica]
          Length = 381

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 134/278 (48%), Positives = 190/278 (68%), Gaps = 6/278 (2%)

Query: 923  RNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRC 982
            R +EDN+   + ++K+ +   +I+ LE R L+  G+  + +   +   + ++L  E+ + 
Sbjct: 86   RELEDNIELMKIESKLRETNKKIKDLE-RQLQQQGLDHYNSNYNRLQTQFEKLNQELGKT 144

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
             G  +  +  ++  + +     Y+D DK++ D  I LKTT++A KDLD+YY ALD+A+MR
Sbjct: 145  NGIRNGREGELNSTEHEANSEIYRDADKKYRDMSINLKTTDLAIKDLDKYYKALDRAIMR 204

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAE 1097
            FHT+KM+EINKII+ELW +TY+G DID I I SD     S   G + Y+Y+V+M  GD  
Sbjct: 205  FHTIKMDEINKIIKELWMKTYKGGDIDTIEIRSDDDPEGSSSTGRKVYNYRVVMVKGDNT 264

Query: 1098 LEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIME 1157
            L+MRGRCSAGQKVLAS+IIRLALAETFC+NCG+LALDEPTTNLD  N E LA AL  I+ 
Sbjct: 265  LDMRGRCSAGQKVLASIIIRLALAETFCINCGLLALDEPTTNLDCDNIEGLAVALSDIIR 324

Query: 1158 DRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +R+ Q+NFQLI+ITHD +F + IG+ +  E Y  V K+
Sbjct: 325  ERQHQKNFQLIIITHDLKFVEQIGRSEFVEDYNHVYKE 362


>gi|254584660|ref|XP_002497898.1| ZYRO0F16038p [Zygosaccharomyces rouxii]
 gi|186703715|emb|CAQ43406.1| DNA repair protein RAD50 [Zygosaccharomyces rouxii]
 gi|238940791|emb|CAR28965.1| ZYRO0F16038p [Zygosaccharomyces rouxii]
          Length = 1304

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 238/764 (31%), Positives = 387/764 (50%), Gaps = 92/764 (12%)

Query: 490  DLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQI---FSIDT 546
            +LS+KSR+     N L  K  E +  L+    D+   + FI +  + L + +    +ID 
Sbjct: 582  NLSTKSRQQ----NELDKKFMEGSLQLTNTEMDLRKNEEFIINATKHLQESLPEDCTIDD 637

Query: 547  YQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKK 606
            Y +V+  A+           I     +       VA+    C  C R F    +DE  K 
Sbjct: 638  YTEVVAEAEASYRTALENLKIHQTTLEFNKKALEVAKTESCCYLCTRKF----DDEGFKS 693

Query: 607  Q---RVKAASSAEHMKVL--SLESSNADSYFQQLDKLRMVYEEYVKL--SKETIPVAEKN 659
                R++  +  +   +L  SLES       + L+ LR + ++ + L  S+  I      
Sbjct: 694  SILLRLQEKTDGKFNTILKESLESEK-----EYLNSLRNLEKDVISLNDSRSRITGLSDK 748

Query: 660  LHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQP-VETADRLFQEIQLWQKQV--- 715
            + ++     +  +  D V   L  +K DK+  E  V+P VE   RL +     +  +   
Sbjct: 749  VTDMRNRNVKMREELDTVNKELESMKEDKDHAEKEVRPLVENIVRLRKASNELESDIKSI 808

Query: 716  -DDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQ--I 772
             D+L     S G+ V T+EE+Q E      +   L+ E+ +L+DE+     + SN+   I
Sbjct: 809  TDELAIYRSSEGK-VETVEELQNEQRNKNESLRRLRKEVGQLQDERETKSKEHSNLLNLI 867

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSD 832
            R   L+  +++ + ++R  K  E +L++   +K QL + E+ + +  G + +   K+   
Sbjct: 868  REKDLKISEIEKSISMR--KNLESDLDN---KKNQLKVLEETVKKLEGDVKEGSRKV--- 919

Query: 833  YNDLKVKLNR---EYEEQA-EQKINFQQEI---EMLLKIASKIKEY---YDLRKDERFKE 882
             N LKV L R   ++E+   E    F+  +   E  + I  ++K +     L  ++   E
Sbjct: 920  -NSLKVDLERKTHDFEKSLDENNKEFKAMVLNNERFISINQQVKGFTASVPLEYEKCVAE 978

Query: 883  LQEKKSQSESEVKSCKIRTDEILVELDRFKD-----------IVRNQDQIRRNIEDNLNY 931
            L+  K Q               LV+LD   +            + + ++ +RN+++NL+ 
Sbjct: 979  LESAKKQ---------------LVDLDHINENMNSGITELAKKLNDSNREKRNLKENLDL 1023

Query: 932  RETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNR--CQGTMSVY 989
             E +A +     +I+ L+        +   E E  ++  E  RL S+  R   +    + 
Sbjct: 1024 MELRADLSSIERQIDELD--------IQNAEAERDRYQQESMRLRSQFERLSSENAGKLG 1075

Query: 990  QTNISRNKIDLKQAQ----YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHT 1045
            +    +N+ID  Q Q    YKD+D ++  Q ++L+       D+D Y NALD A+MR+H 
Sbjct: 1076 ERKQLQNQIDSMQQQLRTDYKDVDVKYQKQWVELQAKTFVTDDIDTYSNALDSAIMRYHK 1135

Query: 1046 MKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGR 1103
            +KME+IN+II ELW++TY G D+D I++ S+  G+G +  SY+Y+V+M   DAEL+MRGR
Sbjct: 1136 LKMEDINRIIDELWKRTYSGTDVDTIQLRSEEVGSGVKMKSYNYRVVMFKQDAELDMRGR 1195

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLAS+IIRLAL+ETF +NCG++ALDEPTTNLD  N ESLA +LH I+E R+ Q+
Sbjct: 1196 CSAGQKVLASIIIRLALSETFGVNCGVIALDEPTTNLDEENIESLARSLHNIIELRRHQK 1255

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NFQLIVITHDE+F   +   Q  + +++V +DD Q S IE  +I
Sbjct: 1256 NFQLIVITHDEKFLNHMDASQFTDHFFKVKRDDRQKSQIEWVDI 1299


>gi|119192416|ref|XP_001246814.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 515

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 198/570 (34%), Positives = 303/570 (53%), Gaps = 87/570 (15%)

Query: 642  YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETA 701
            Y+ +V+LS  TIP AEK +  L  E ++     +D   ++++    K  +E L + V T 
Sbjct: 25   YDTWVRLSNTTIPEAEKEISRLELEREELLVKVEDHDAIVSEKGESKRDIESLSKTVATI 84

Query: 702  DRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQR 761
             +   EI+  + Q+ DL       G   RT+EEIQ  ++        L+  + K+ +E+ 
Sbjct: 85   AKYEGEIKTLKVQIQDLSTKQQQPGSS-RTLEEIQDMIATIGEGCRELKRAIAKITNERD 143

Query: 762  YMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGP 821
                +++ ++++              LRDV+    EL++      +  LD+K   EA   
Sbjct: 144  QSRTEITELELQ--------------LRDVRS---ELDN-----ARFQLDKKASIEAR-- 179

Query: 822  LSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYD---LRKDE 878
                    L +Y +L  K  RE  E+A+       +IE L+   SK +  +D    R ++
Sbjct: 180  --------LEEYRNLNTK-QRESIEKADH------DIESLVPEVSKAQAKFDDINARAEQ 224

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKV 938
            R +ELQ++ S     +    + +++I+   DR            R +E +    + + + 
Sbjct: 225  RERELQQEVSSLSDSLHQLDLASEDIVSYNDRGGP---------RQLERSKQESDRRTRE 275

Query: 939  DKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKI 998
              F S  ++      K+G + + + +L +       LL++ N                  
Sbjct: 276  YNFLSATQAS-----KMGEMKSKDNQLLQ-------LLADWN------------------ 305

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
                  YKD   +  +  I+++TT+ A +DL RY  ALDKA+M++H++KMEEIN+II EL
Sbjct: 306  ----TDYKDAAFKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHSLKMEEINRIIEEL 361

Query: 1059 WQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            WQ+TYRG D+D I I SD+E A G RSY+Y+V+M   DAE++MRGRCSAGQKVLAS+IIR
Sbjct: 362  WQKTYRGTDVDTILIRSDNENAKGNRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIR 421

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LALAE F +NCG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F 
Sbjct: 422  LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFL 481

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            + +     ++ YYRV++ D Q SIIE Q I
Sbjct: 482  RHMQCGDFSDYYYRVSRSDKQKSIIERQSI 511


>gi|342185934|emb|CCC95419.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1346

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 211/767 (27%), Positives = 393/767 (51%), Gaps = 68/767 (8%)

Query: 490  DLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQK 549
            ++ +++ E D+++ +LQ +  +V D L +   ++  K+    S+L S      ++D+++ 
Sbjct: 596  NIEAEANELDRQLVVLQQRQSQVADELKRESIELKRKRSHCISRLGSAE----ALDSFEA 651

Query: 550  VLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-DEFVKKQR 608
                A+E       + + +  M   +  F   A+A   CP C+  F+ +   + F+   +
Sbjct: 652  AFIKAREAHHSMSHEQSASRAMAACYSHFVEKAKADGKCPLCDHNFTDDAALNNFLDTIK 711

Query: 609  VKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKET--IPVAEKNLHELTEE 666
            VK  +     +    ++      F++L+       + V + + T  IP  E++L  +TEE
Sbjct: 712  VKQQTQTNTTEKDVEDAQGRVRMFEELEA------DVVSIRRLTARIPQIEESLSTVTEE 765

Query: 667  LDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRL-----FQEIQLWQKQVDDLEY- 720
            ++ K    +DV G  + ++   + V+ L+Q     + L     F + QL +++  ++E  
Sbjct: 766  INIKRALLEDVNGRRSGVEDQLKRVQNLMQAATDINGLASEKHFLKQQLQRREAANVEMD 825

Query: 721  --------MLDSRGQGV--RTMEEIQL---ELSGSLSTKDNLQNELEKLRDEQ--RYMEN 765
                    M ++ G GV   T E++     E +  L   + L NEL + ++ +  + +  
Sbjct: 826  AASAKHAEMGENGGSGVCAPTYEQLSAQCEEANAELHRLNVLLNELHRRQNGESDQVLIG 885

Query: 766  DLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKE 825
            +L+  +     L+ +  + +     + +  EE    +     +D   +   E    LS E
Sbjct: 886  ELTKRRSELCELKMKFTRQSELEWAIAQCIEEENTYVGRVADIDAKNEKATEVLKGLSAE 945

Query: 826  KEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQE 885
             E L     +L++ LN+ Y  Q       +   +++  I  K+++Y+  R  E+  E + 
Sbjct: 946  LEVLHKKREELEMSLNQGYVGQ------LKATAQLVSNIVPKLRDYFACRAAEQLSEARA 999

Query: 886  KKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRR---NIEDNLNYRETKAKVDKFA 942
                 E+   SC    +EI        +++R  ++ RR    +   + Y E +  +++  
Sbjct: 1000 SLHDGEA---SCAAAVNEITSLRSAIDELLRGMEEERRMQSQLSKQIEYLEKQKAIEEDE 1056

Query: 943  SEIESLEERV--LKIGGVSTFETELGKHLLERDRL--LSEVNRCQG------------TM 986
            + +  L + +  LK+ GV   E  LG+ ++ER+ +  + E+ R +G             M
Sbjct: 1057 ARLSELVQVITKLKLKGVPGAEAILGRDVVEREGIARIRELIRARGGELERLGAQQDGVM 1116

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
               +  I+  K  L + ++KD++KR+    ++ +TT++A  D+++YY AL+KA+  +H  
Sbjct: 1117 EAMRQEITGLKAQLAREKFKDVEKRYRTTFLKAQTTDIAVADVEKYYRALEKAVQTYHQE 1176

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RSYSYKVLMQTGDAELEMRGR 1103
            K+ +IN+I+ +LW+QTY+G DID I + S+ +   T   RSYSY+V+M+ G+ E++MRGR
Sbjct: 1177 KIAQINQILADLWRQTYKGSDIDTIELRSEDDVTSTTVRRSYSYRVVMKRGNGEMDMRGR 1236

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQ+VLAS++IRLAL+E FC +CGILALDEPTTNLD  NA SLA +L  ++++ +  +
Sbjct: 1237 CSAGQRVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNARSLAESLRMLIDNHRTVK 1296

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHSIIEAQEIFD 1209
            +FQLIVITHDE F + +G  Q  + +Y + KD +   S+IE +  FD
Sbjct: 1297 HFQLIVITHDEHFVRALGG-QALDTFYYIHKDREGAFSVIE-ERTFD 1341


>gi|326427583|gb|EGD73153.1| hypothetical protein PTSG_04865 [Salpingoeca sp. ATCC 50818]
          Length = 1087

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 291/1076 (27%), Positives = 506/1076 (47%), Gaps = 135/1076 (12%)

Query: 187  LAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITN 246
            L+  + D+ E+LK     +E  VA +     + + E +    K++ LE  +     ++  
Sbjct: 82   LSPHLPDSTEDLKQKLRQYESEVASKRQKFQETKAESDKAKEKLRRLEHQLSDLKTDLGA 141

Query: 247  LLSEAGAHMSRMNERDSTIQKLFARHNLGSL--PNAPFSNEAALNFINRIRSRLSDLERD 304
                +  H  ++ +R   +  L     +  +  P A         F+  ++ +L D E  
Sbjct: 142  YSQASTEHKRKLQDRKQLVVDLCRELAIADVVEPEA---------FLEYLQGQLKDAEAR 192

Query: 305  LEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENE-RDSF-- 361
            +++ K S           Y     R      QK+AK       L+H+K+ E++ R +   
Sbjct: 193  MKETKAS-----------YDQKQSRVDEKHEQKRAKFNQLQARLQHLKQTEDKCRKTIRS 241

Query: 362  ---ELQISNLNLSHIDERENKMRI-EVERKTNQLAEREFEINIRQKQSELFAMD--QKIK 415
               +L+ +    + +   E  +   E+E K    A + FE  I +K  E    D  Q++K
Sbjct: 242  LTQQLEQAPAQTTDVQSLEALVNTAELEHKHADDALKAFEAEIAEKNIEKQKKDTQQQLK 301

Query: 416  ALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKK 475
                    +  D E + K+   K  +E  K++  KI+ ++  ++ D    +L  DR    
Sbjct: 302  RATERLRRIRQDEELQRKIQTTKDAMEQSKQRVDKILKKHGSELEDAAGDQLSPDR-YHA 360

Query: 476  EITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLE 535
             +  AL++     D+ ++++R+A                 + +H  D ++++  I+  LE
Sbjct: 361  AVVGALQSQERHLDN-ANRNRDA-----------------VVQHLADKNARQSAIKQSLE 402

Query: 536  SLNQ------QIFSIDTYQKVLDSA-KEK----RDVQKSKYNIADGMRQMFDPFERVARA 584
            +L Q      Q  + +  +K LD A KE     RD+ +S  ++   M +++   ++ ++ 
Sbjct: 403  TLQQEHSAWSQRLAKECPEKPLDDALKEAEAALRDM-RSMQDLRPAMAKVYRVIKQKSQQ 461

Query: 585  HHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESS-NADSYF---QQLDKLRM 640
             H C  C+R F++++E E   +         E M+  SLESS +A+S     Q++DKL+ 
Sbjct: 462  THACFVCQRDFASDQEAEDCLR------LIEEKMQRFSLESSGDAESVTVQQQKVDKLKG 515

Query: 641  VYEEYVKLSKETIPVAEKNLHE--LTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPV 698
            +  E  +  ++   ++E   HE  L    ++  +   +     + I   K++++ L    
Sbjct: 516  LQMEAKRFQRQEERMSE---HEGDLAALDNEIEELEAEKEKTESHIDDTKDAIQRLRALC 572

Query: 699  ETADRLF---QEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEK 755
            + A  L    Q I  + K++  L   L                 SG   T D  + EL+K
Sbjct: 573  DVAKDLKASQQRINTYTKEISSLTSRL----------------TSGDTITLDEAEQELQK 616

Query: 756  LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQ-LDLDEKL 814
            L+ ++  +  + S++  R   L+   V+   T + V   ++EL  + +   Q   L E++
Sbjct: 617  LQRKREELLQEESDVVRRRGKLQSACVQ---TQQGVSTRKDELAKVHQALAQQARLREQI 673

Query: 815  LAEASGPLS------------KEKEKLLSDYNDLKVKLNREYE---EQAEQKIN-FQQEI 858
             A++    +            ++ EK + D +  +  L  E E   E++++++N   + I
Sbjct: 674  QAQSQELTATQDQRKALRTDQQQYEKAMEDADRERRDLQHEREQVLEKSQREVNKISRCI 733

Query: 859  EMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQ 918
              L  I S I  Y    + +R  + +E+  + + + +    R  ++   + +    V   
Sbjct: 734  NRLDAIESDINRYVASGQRQRLAKCKEELEERQRDQRELSDRIKDLDRHMSQLSSDVSTH 793

Query: 919  DQIRRNIEDNLNYRE-------TKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLE 971
             Q R NIE NL +RE        KA+ D    E+   +E    +G  S  E E       
Sbjct: 794  KQYRANIEANLRHREKEEEMQRVKAETDALRQEMTEQDEDEGDLGDRSELEEE------- 846

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDR 1031
            RDRLL   +   G  S     +  ++ DL +   K++D     + I+ + T+   +DL++
Sbjct: 847  RDRLLQLKHTLTGRRSELLNKLQVDEEDLGKPHLKNVDAEFQRKSIECQATKQLQEDLNK 906

Query: 1032 YYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----SEGAGTRSYSY 1087
            YY+ALD A+++FH +KME IN+II+E+WQ+TY+G DIDY+ I SD     E    +SY Y
Sbjct: 907  YYSALDNAIVKFHALKMESINRIIKEIWQKTYQGNDIDYVEIVSDVEKKKETTRGKSYQY 966

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            +V+M  GD  L+MRGRCSAGQKV+AS+IIRLALA+ FC NCG+L LDEPTTNLD  N E+
Sbjct: 967  RVVMVKGDTRLDMRGRCSAGQKVMASIIIRLALADCFCANCGVLTLDEPTTNLDYENKEA 1026

Query: 1148 LAAALHRIMEDRK-GQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            LA  L  I+ DRK  Q NFQL++ITHDE+F +L+ +      YYRV+KD+  HS+I
Sbjct: 1027 LAKCLADIVNDRKVKQPNFQLLLITHDEKFLELLHRFSLGRIYYRVSKDERGHSVI 1082


>gi|336369555|gb|EGN97896.1| hypothetical protein SERLA73DRAFT_182676 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336382329|gb|EGO23479.1| hypothetical protein SERLADRAFT_469443 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 450

 Score =  256 bits (655), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 165/456 (36%), Positives = 263/456 (57%), Gaps = 31/456 (6%)

Query: 761  RYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLD-----LDEKLL 815
            R  E DL ++++R  TL+       N +RD    EE +  + EE   L+     LD K+ 
Sbjct: 12   RTFEGDLHSMEMREMTLK-------NQIRDKDTLEERIASMKEEIITLNARSKELDSKI- 63

Query: 816  AEASGP---LSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYY 872
            AEA  P   L +E ++  S+ ND  ++  R     + Q++N   E++ L  +   ++ Y 
Sbjct: 64   AEAQAPIERLDQEHQQAQSELNDKLLEAQR-----SSQELNV--EVDKLENVNKNVERYA 116

Query: 873  DLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR 932
              ++    KE  +K    E+E+K   I+ + +   + + +  +        N+ +N+  R
Sbjct: 117  REKRARLLKECSDKIEDLEAEIKDLGIKIENVRDIVAKIEKEINESGTSMANLRENIRIR 176

Query: 933  ETKAKVDKFASEIE--SLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQ 990
            +    +    +EI+   +EE         TF+T       +     S+     G ++  +
Sbjct: 177  KLGRDIKATQAEIDLCDMEEAA---KAKRTFDTIYPVQKQKETDAQSKFAHMGGEITSLE 233

Query: 991  TNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
              + + + DL   ++KDI+K++ +QL+++K ++MAN DL++Y  ALD A+M++H++KMEE
Sbjct: 234  DQLRQREDDL--TEFKDINKQYTNQLVKVKMSDMANNDLEKYAKALDNAIMKYHSLKMEE 291

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQTGDAELEMRGRCSAGQK 1109
            +N  +R LW +TY+G DID I+I SD EG  + RSY+Y+V+M     E++MRGRCSAGQK
Sbjct: 292  VNDTMRHLWNKTYQGTDIDGIKIRSDVEGGASKRSYNYRVVMTKDQVEMDMRGRCSAGQK 351

Query: 1110 VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIV 1169
            +LAS+IIRLAL+++F  NCGILALDEPT  LD  N ++LAA+L  I+ +RK   NFQLIV
Sbjct: 352  MLASIIIRLALSDSFGQNCGILALDEPTNALDTENIDALAASLVDIINERKNHANFQLIV 411

Query: 1170 ITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQ 1205
            ITHDE F + +GQ    E Y+RV++D  Q S+IE Q
Sbjct: 412  ITHDENFLRKLGQSDVMEYYWRVSRDSRQKSVIERQ 447


>gi|302409644|ref|XP_003002656.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102]
 gi|261358689|gb|EEY21117.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102]
          Length = 1195

 Score =  256 bits (655), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 212/653 (32%), Positives = 343/653 (52%), Gaps = 68/653 (10%)

Query: 588  CPCCERPFSAEEEDEFVKKQR-----VKAASSAEHMKVLSLESSNADSYFQQLDKLRMV- 641
            C  C+R F   ++ + V K R     +K    ++  K     S + D     LDKLR V 
Sbjct: 574  CKLCDRGF---DDKQSVNKSRFSDKLIKYLDPSKKEKA----SEDLDKSKATLDKLRQVR 626

Query: 642  -YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVET 700
             + E  + S   +P  ++    L  EL+   +  ++    +   +A +  VE L + V  
Sbjct: 627  VHHETYERSLGELPGLKEACKTLEAELETHERQLEEHDENVNAEEAKQADVETLNKTVMN 686

Query: 701  ADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL-----STKDNLQ---NE 752
              +  ++++  + QV+ +     S G   RT +EI  EL  +      STK  L     +
Sbjct: 687  ISQTLKDMKDSEAQVERI-MSQQSSGMATRTADEIH-ELQATCKEQMRSTKARLTKITTD 744

Query: 753  LEKLRDEQRYME---NDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQ-L 808
             +++RD+   +E   ++L N   R  +  E K    N ++ +K+ +     L+++  Q L
Sbjct: 745  RQRMRDQLNSLELEKSELKNKLSRVQSQLERKKDFQNQIQTLKEDQANQRELIQKADQDL 804

Query: 809  DLDEKLLAEASG------PLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLL 862
            ++ E  +AEA           + KEK + +  DL                N   E++M  
Sbjct: 805  EVIEPSIAEARAVRDDTLQRGRAKEKAIVEERDLVA--------------NSVTELKM-- 848

Query: 863  KIASKIKEYYD------LRKDER-FKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIV 915
             + S I++Y D      L  ++R    L++  + +E E+    +RT+++  ++D      
Sbjct: 849  -VESDIQDYMDRGGPSNLAANQRAIDGLEKTIAATEQEISDLTVRTNKLKQDID------ 901

Query: 916  RNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL 975
             N D+ ++NI +NL +R+ K ++D   +EI+ L+              E  +     + L
Sbjct: 902  -NGDRKKQNISNNLKFRQNKRQLDVLRAEIDDLQS-CDADDDYDRLNDEAVQLENRHNML 959

Query: 976  LSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNA 1035
            ++E     G M      ++R  +   +  Y+D  K++ +  I+++TT+ A +DL RY  A
Sbjct: 960  VAERGSLMGQMKTKDEELAR-LLGEWEMDYRDASKKYRESHIKVETTKAAIEDLGRYGAA 1018

Query: 1036 LDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTG 1094
            LDKA+M++H +KMEE+N+I  ELWQ TY+G DID I I SD+EGA G RSY+Y+V M   
Sbjct: 1019 LDKAIMQYHGLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNEGATGRRSYNYRVCMVKQ 1078

Query: 1095 DAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHR 1154
            D E++MRGRCSAGQKVLAS+IIRLALAE+F +NCG++ALDEPTTNLD  N +SLA +LH 
Sbjct: 1079 DTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHH 1138

Query: 1155 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            I++ R+ Q NFQLIVITHDE F + +   +  + ++RV +DD Q S+I  + I
Sbjct: 1139 IIKSRQAQSNFQLIVITHDEEFLRHMRCSEFCDSFFRVKRDDKQCSVISRESI 1191



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 2/99 (2%)

Query: 4   KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
           K +E  L T N   GE+  LS R A MD  VPAL+GVS AIL+ VIF HQDE+ WP+ +P
Sbjct: 111 KTLEGSLATNN--NGERSVLSTRVAQMDEAVPALLGVSTAILDYVIFCHQDESLWPMSEP 168

Query: 64  STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKL 102
             LKK+FD IF A RYTKA++ +K L K Q +E+   K+
Sbjct: 169 GALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELARLKI 207


>gi|320586122|gb|EFW98801.1| DNA repair protein rad50 [Grosmannia clavigera kw1407]
          Length = 1301

 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 206/332 (62%), Gaps = 22/332 (6%)

Query: 883  LQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFA 942
            L++   ++E  V++       +  E+D       N D+ ++NI DNL+YR     + +  
Sbjct: 979  LEQTMRETEQAVETVAATVSRMSTEMD-------NSDREKKNIADNLSYRRNSRLLGELR 1031

Query: 943  SEIESLEERVLK------IGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRN 996
             +I +LEER         +G     E +  K L ER  +        G+M      + R 
Sbjct: 1032 GQILALEERRAADDYDRLVGEARRLEVQHSKLLAERSAIW-------GSMKTKDEELLR- 1083

Query: 997  KIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIR 1056
            ++D  + +Y+D + R+ +  I+++TT+ A +DL RY  ALDKA+M +H  KMEE+N+I  
Sbjct: 1084 QLDEYEQEYRDAELRYREAHIRVETTKAAIEDLGRYAAALDKAIMEYHAFKMEEVNRIAG 1143

Query: 1057 ELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLI 1115
            ELW+ TY+G DID I I SD+E A G RSY+Y+V M   D E++MRGRCSAGQKVLAS++
Sbjct: 1144 ELWRATYQGTDIDTILIRSDNEAATGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASIV 1203

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAE+F ++CG++ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE 
Sbjct: 1204 IRLALAESFGVSCGLIALDEPTTNLDSDNIRSLAVSLHAIIRARQAQANFQLIVITHDED 1263

Query: 1176 FAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            F + +      + +YRV++DD Q+S+I+ + I
Sbjct: 1264 FLRHMQCSDFCDTFYRVSRDDKQNSVIKRESI 1295


>gi|426195738|gb|EKV45667.1| hypothetical protein AGABI2DRAFT_223828 [Agaricus bisporus var.
            bisporus H97]
          Length = 535

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 181/544 (33%), Positives = 297/544 (54%), Gaps = 46/544 (8%)

Query: 681  LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLEL- 739
            L +IK     +  L Q   +  RL +E +  +++   +E  L S G   RT +++Q EL 
Sbjct: 10   LDEIKGQIREITNLKQQASSVARLQKEAEKARQEATSIEDSLKSTGT-TRTADDVQRELD 68

Query: 740  --SGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIR-----WHTLREEKVKAANTLRDVK 792
              SG+  T +  ++ +   RD Q        N+ IR      H + ++++   + L+  +
Sbjct: 69   ELSGAFRTIEREKHSITIERDRQ--------NVTIRTLEDSLHGMEKQELGLESKLQGKE 120

Query: 793  KAEEELEHLMEEKG----QLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQA 848
              EE +  + ++ G    Q+   E  + E   P+    E L + + D + +L+ +  + +
Sbjct: 121  ALEENIAKMRQDIGLFTDQIKDLESQIEEGEAPI----EALNTSFQDSQQELSAKASQVS 176

Query: 849  EQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVEL 908
             Q       +  L  +   ++ Y    K+ R +EL+     +   V    +   E+  +L
Sbjct: 177  TQIQELNTSLNKLNHVHKGVERYI---KERRARELE----NTSERVDQLDLELQELSAKL 229

Query: 909  DRFKDIVRN-QDQIRR------NIEDNLNYRETKAKVDKFASEIES--LEERVLKIGGVS 959
            +  ++++ + Q +I        N+ DN+  R+   ++ +   EI+S  +EE         
Sbjct: 230  NGVREVITDIQKEINESGASVANLRDNIRARKLIREISEVQKEIDSHDMEEMA---KARR 286

Query: 960  TFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQL 1019
             F+ +      + D L  E  R +G +   Q  + +   DLK+  +KDI+KR+ +QLI +
Sbjct: 287  NFDEKYKLVKAKEDNLRVEYGRIRGELDTLQQQVEKYDTDLKK-NFKDINKRYTEQLISV 345

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
            K ++MAN DL++Y  ALD A+M++HT+KMEE+N +++ LW +TY+G DID I+I SD EG
Sbjct: 346  KVSDMANSDLEKYGKALDNAIMKYHTLKMEEVNDVMKHLWNKTYQGTDIDGIKIKSDVEG 405

Query: 1080 AGT-RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
            A   RSY+Y+V+M     E++MRGRCSAGQK+LAS+IIRLAL+++F  NCGILALDEPT 
Sbjct: 406  AANKRSYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTN 465

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
             LD  N ++LAA+L  I+ +R+   NFQLI+ITHDE F + +GQ    E Y RV++D  Q
Sbjct: 466  ALDTDNIDALAASLVDIINERRTHSNFQLIIITHDENFLRKLGQSDVMEFYMRVSRDSRQ 525

Query: 1199 HSII 1202
             SII
Sbjct: 526  KSII 529


>gi|390346722|ref|XP_792128.3| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
            purpuratus]
          Length = 1587

 Score =  256 bits (653), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 137/306 (44%), Positives = 204/306 (66%), Gaps = 10/306 (3%)

Query: 904  ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFET 963
            I   + +  D + NQ      + +N+   + +  V+K + EIE L+E   ++GG +    
Sbjct: 1272 IEATIKQLTDEISNQKVKEMELRNNMLLFKYRQDVEKKSGEIEKLQE---QLGGYNPITI 1328

Query: 964  ELGKHLLERDR--LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            E  K  +E  +  L  E N+  G  +  +  +++ + +L+  +YK+ +K + D +I+ +T
Sbjct: 1329 EREKTEMEGKKAGLNKEKNQLDGRSTELREAVTKQEKELESDKYKNAEKNYNDMMIKCRT 1388

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE-GA 1080
            TE+AN+DLD+YYNAL+ A+  +H  KM +INKI+++LW+ TY+G DIDYI I +D E GA
Sbjct: 1389 TEVANEDLDKYYNALNSAINTYHIQKMLKINKILQDLWRNTYKGSDIDYIEIRADDETGA 1448

Query: 1081 GT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPT 1137
             T   R Y+Y+V+M  GD  L+MRGRCSAGQKVLASL+IRLALAETFCL+CGILALD+PT
Sbjct: 1449 STTQRRQYNYRVVMMKGDEILDMRGRCSAGQKVLASLLIRLALAETFCLSCGILALDDPT 1508

Query: 1138 TNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-D 1196
             NLD  N ESLA AL  I++ ++ Q NFQL++ITHDE F +L+G   + + YYRV  + D
Sbjct: 1509 ANLDRDNIESLAHALVDILKSQENQRNFQLLIITHDEEFVELLGHSDYTDNYYRVTNNAD 1568

Query: 1197 HQHSII 1202
            ++ +I+
Sbjct: 1569 YRSTIV 1574



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 89/125 (71%), Gaps = 8/125 (6%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E+K++E  ++ ++ + G+K  L  +CA++DR +   +GVSK +L NVIF HQ++ANWPL
Sbjct: 109 IEFKSLEGTIERVD-NFGKKPGL--KCAEIDRAMVESLGVSKQVLSNVIFCHQEDANWPL 165

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLK-----DAAY 115
            +  TLK KFD+IF+ATR+ KALE I+KL ++Q+ +IK Y+ K E+L+  +     DA +
Sbjct: 166 SEGKTLKGKFDEIFAATRHIKALETIRKLRREQSDQIKGYQSKTEDLKVWREKAKQDANH 225

Query: 116 KLRES 120
           +LR S
Sbjct: 226 QLRIS 230


>gi|156848089|ref|XP_001646927.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156117609|gb|EDO19069.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1305

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 211/681 (30%), Positives = 353/681 (51%), Gaps = 107/681 (15%)

Query: 581  VARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS--SAEHMKVLSLESSNADSYFQQLDKL 638
            +A  ++ C  C R F    +DE  K   +      + +  +V   E+  ++  F  LD+L
Sbjct: 673  IAENNNCCYLCSRAF----DDESFKSSLLNQLKERTNDEFEVTLKETVESEKTF--LDQL 726

Query: 639  RMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD----KESVEV- 693
            R + ++ +     T+  A+  L ELT + D++ +  D     LA+I+A     KES +  
Sbjct: 727  RKLEKDII-----TLNTAKDKLTELTSKSDEQRKVCDKFHDQLAEIEAKGNNLKESRDYF 781

Query: 694  ---LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGVRTMEEIQLELSGSLSTKD 747
               L   VE   RL  E +  Q +VD +   L   G    GV+T+EE+Q +      T  
Sbjct: 782  DTHLKSKVELITRLKTETRDLQAEVDMISDELKVFGGIENGVQTIEELQSKQRTYNDTLR 841

Query: 748  NLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN---TLRDVKKAEEELEHLMEE 804
              + E+ +L++E+    N+LS++    + ++E  +K +    +LR  K  EE+     EE
Sbjct: 842  TSRKEVVQLQEEREAKSNELSSL---MNLIKERNIKISQIEASLRRRKSIEEDFRTKREE 898

Query: 805  KGQL------------DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKI 852
              ++            DLD KL            +K+L D   ++   +RE   + E   
Sbjct: 899  YSEIAGRIEKLNSEIIDLDNKL------------QKVLKDCKSVEDNFSRESTTKQEDVD 946

Query: 853  NFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFK 912
            +  + I+ + + +S I+ Y               +S+  +E+ +C IR      EL   +
Sbjct: 947  SINRFIQQVDQYSSAIRNY---------------ESKGSTELDNC-IR------ELSSVR 984

Query: 913  DIVRNQDQIRRNIED-NLNYRETKAKVDKFASEIESLEERVLKIG----------GVSTF 961
            +I+   D ++ N++  N +  +    ++   +E ++L + +  IG           +S+F
Sbjct: 985  NII---DSLKENVDSKNKSLTDQCRILNDSNNEKKNLLQNIELIGLKDKLSQIEEQISSF 1041

Query: 962  ETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQ-------------YKDI 1008
            + E  ++  ERD+   E  + +  +  + +  +    ++KQ Q             YK++
Sbjct: 1042 DIENAEN--ERDKYQQESLKLRNMIEKFSSEKAGKLGEMKQLQNQIESLNQQLKIDYKNV 1099

Query: 1009 DKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1068
            D  +    ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G D+
Sbjct: 1100 DDNYHKGWVELQTKSFVTDDIDTYSRALDSAIMKYHGLKMQDINRIIDELWKKTYSGTDV 1159

Query: 1069 DYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1126
            D I+I SD  G  T+  SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL+ETF +
Sbjct: 1160 DSIQIRSDEVGNSTKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGI 1219

Query: 1127 NCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHA 1186
            NCG++ALDEPTTNLD  N ESLA +L+ I++ R+ Q+NFQLIVITHDE+F   +   Q  
Sbjct: 1220 NCGVIALDEPTTNLDEENIESLAKSLNNIIQFRRNQKNFQLIVITHDEKFLNHMNAAQFT 1279

Query: 1187 EKYYRVAKDDHQHSIIEAQEI 1207
            + +++V +D+ Q S+IE  +I
Sbjct: 1280 DHFFKVKRDERQKSLIEWVDI 1300


>gi|365988260|ref|XP_003670961.1| hypothetical protein NDAI_0F04000 [Naumovozyma dairenensis CBS 421]
 gi|343769732|emb|CCD25718.1| hypothetical protein NDAI_0F04000 [Naumovozyma dairenensis CBS 421]
          Length = 1305

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 219/668 (32%), Positives = 348/668 (52%), Gaps = 57/668 (8%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A   + C  C R F   E D+F  K  Q+++A + A     L   
Sbjct: 659  MHQTTLDFNRKALEIADRDNCCYLCARKF---ETDDFRGKILQQLRAKTDANFENTLKET 715

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
                  Y   LD LR +  +++ L+  K+        + E  +++ +    FD+      
Sbjct: 716  VKEEKEY---LDGLRALERDFLSLTTCKDDYKSLTSRVDEYEKDVSRLKNKFDEFELKGE 772

Query: 683  QIKADKESVEVLVQPV-ETADRLFQEIQLWQKQVDDLEYML----DSRGQGVRTMEEIQL 737
             +K+D++  E +++ + E    L +E++  +K V D+   L    DS G GV+T+EE   
Sbjct: 773  NLKSDRDYAERILRAICEEIVYLRKEVKSLEKNVQDVAEELRIYGDSDG-GVQTVEE--- 828

Query: 738  ELSGSLSTKDNLQNELEK-LRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE 796
             LS     K+ L  +L K ++D Q   E+           ++E  +K     R ++++E 
Sbjct: 829  -LSHQQQEKNALLRQLRKDVQDLQNERESKTREHSALLTVIKERNLKVNEIERGLQRSEN 887

Query: 797  ELEHLMEEKGQLD-LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN 853
              + ++ ++ ++D L  ++  L E    L  EKE      N+ +++ N E E Q     N
Sbjct: 888  IKKDIIAKEHEVDTLGVRIQNLEEEINVLLGEKEIAAKLLNETRLEYNEEIESQRGNIDN 947

Query: 854  FQQEIEMLLKIASKIKEYYDLRKDERFKELQE-----KKSQSESEVKSCKIRTDEILVEL 908
             ++ ++    + S +    D    + F EL++      K Q + EV    I  +E   EL
Sbjct: 948  IKRYLDRFNDLKSDV----DTFSTQGFAELEDCTVKLAKVQEDLEVAGKNI--EETQDEL 1001

Query: 909  DRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKH 968
            +  ++ +++ +  ++N+E NL   E + ++ +   E+  L         +   E E  K+
Sbjct: 1002 NLHREKLKDSNNEKKNLEQNLRLIELQERLKETEVEVSGL--------NIQNAEAERDKY 1053

Query: 969  LLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
              E  RL      LS  N  + G +   Q+ I   K  L+ + YKDID ++    ++L+T
Sbjct: 1054 QQESSRLRNLFERLSAENAGKMGEVKQLQSQIEGLKHQLR-SDYKDIDDKYHKNWVELQT 1112

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG 1081
                  D++ Y  ALD A+MR+H +KM++IN+II ELW++TY G DID I+I SD   +G
Sbjct: 1113 RTFVTDDIETYSKALDSAIMRYHGLKMQDINRIIDELWKRTYTGTDIDTIKIRSDEVTSG 1172

Query: 1082 TR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             R  SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL+ETF  NCG++ALDEPTTN
Sbjct: 1173 VRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGTNCGVIALDEPTTN 1232

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N ESLA AL+ I+  R+ Q+NFQLIVITHDE+F   +   Q  + ++R+ +DD Q 
Sbjct: 1233 LDEENIESLAKALNNIIGLRRHQKNFQLIVITHDEKFLNHMNASQFTDHFFRIKRDDRQK 1292

Query: 1200 SIIEAQEI 1207
            S IE  +I
Sbjct: 1293 SQIEWVDI 1300


>gi|452983598|gb|EME83356.1| hypothetical protein MYCFIDRAFT_38930 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1304

 Score =  253 bits (645), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 193/639 (30%), Positives = 333/639 (52%), Gaps = 39/639 (6%)

Query: 587  VCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYV 646
             C  C RPF+++ E + +   RVK        ++   + + A++  +Q  K+   ++ + 
Sbjct: 683  CCRMCTRPFASQAELQAML-DRVKLEQDNMTQQIDEQKITEAEAALEQARKVNAQFDTWE 741

Query: 647  KLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQ 706
            +L+++ +P   K++  +  +  Q +   +       +  + K+ VE L + V T   L  
Sbjct: 742  RLTQKEVPAVVKDIENIERKWKQANNDCESHSSFFQEAASRKQDVESLSKTVNTIVTLSN 801

Query: 707  EIQLWQKQVDDLEYMLDSRGQGV-RTMEEIQLELS---GSLSTKDNLQNELEKLRDEQRY 762
            E    QKQV+  E     + QG+ R  E +Q ++         +   ++E   +RD +  
Sbjct: 802  EADALQKQVE--EQAAKQKSQGLSRGFEAVQADIKKIDAESKAQQASRDEAASIRDRKTK 859

Query: 763  MENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHL-MEEKGQLDLDEKLLAEASGP 821
              +DL     R     ++ +      +D++  E+E + L  +E+ ++   +  L E +  
Sbjct: 860  AVSDLELEASRLEGKLQQALYDLKQRKDLENQEQEYKALKSQEREKIQEFDAKLNEIASQ 919

Query: 822  LSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFK 881
             + E+ K    Y+D+  +   +  EQ  +       +  L  + + I+ Y++   D++  
Sbjct: 920  TATEQAK----YDDISKRGADKDREQQNRFNKLNNSLNKLSTVEADIQGYHERGGDQQLL 975

Query: 882  ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKF 941
              + +K  ++++V        +I   + +  D  ++  + +RNI DN  YR  + ++ + 
Sbjct: 976  NAKREKEVADADVDRAVAEQSQIARNIKKLTDQSQSYAESKRNITDNQRYRRDRRQLQQL 1035

Query: 942  ASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSE----VNRCQGTMSVYQTNISRNK 997
            + EIE LE+R  +     T++ E  +   +RD   ++    V   +G  S  Q +I+   
Sbjct: 1036 SDEIEELEKRNCE-ADAQTYQREAERWQRKRDEAAAQQAQVVGELKGVDSQLQVSIAEFG 1094

Query: 998  IDLKQA--QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKII 1055
             D K A  QYK          I + TT+ A +DL  Y  ALDKA+M++HT+KME+IN II
Sbjct: 1095 RDYKTAGRQYKAAH-------IMVTTTKAAIQDLGAYGAALDKAIMQYHTLKMEQINGII 1147

Query: 1056 RELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
             ELW++TY G D+D I I S++E    T++Y+Y+V+M   D E++MRGRCSAGQKVLAS+
Sbjct: 1148 DELWRKTYMGTDVDTIMIRSENETVKSTKNYNYRVVMVKQDTEMDMRGRCSAGQKVLASI 1207

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDE 1174
            IIR+ALAE F + CG++ALDEPTTNLD  N  +LA +L  I+++RK Q NFQLI+ITHDE
Sbjct: 1208 IIRMALAECFGIRCGVIALDEPTTNLDVDNIRALALSLSAIIKERKKQANFQLIIITHDE 1267

Query: 1175 RFAQ------LIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             F +      L+G       YYRV +++ Q+++I  Q I
Sbjct: 1268 DFLREMRCDDLVGH------YYRVHRNNDQNTVIAKQSI 1300


>gi|401623992|gb|EJS42069.1| rad50p [Saccharomyces arboricola H-6]
          Length = 1312

 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 220/683 (32%), Positives = 350/683 (51%), Gaps = 87/683 (12%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A   + C  C R F   E + F  K  Q +K  + A+  K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDNCCYLCSRKF---ENESFKSKLLQELKTKTDADFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
             +N   Y   LD LRM+ +  + L+   E I  A+++L +  EE        D +  +  
Sbjct: 723  VNNEKEY---LDSLRMLEKHIISLNSINEKINDAKESLEKAREEAKFSKSKLDALEVMST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
             +K +KE  E  ++P      L ++    ++++ DLE          +T+ +   ELS  
Sbjct: 780  TLKNEKEFAESEIRP------LIEKFTYMEREIKDLE-------NNSKTISD---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDL-------SNIQIRWHTLREEKVKAANTLRDVKKAE 795
             +++D +Q  +++LRD+QR M + L       S++Q++      E  +  N +++ +   
Sbjct: 824  NTSEDAVQT-VDELRDQQRKMNDSLREIRKCISDLQMKKDEKVRENSRMINLIKEKELTV 882

Query: 796  EELEHLMEEKGQLD------------LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNRE 843
             E+E  + +K  +D            +D ++ A  S  +S +++K     N+ +  LN  
Sbjct: 883  SEIESALTQKQNIDESIRSKKLNIKDIDSRVEALESQIISLQRKK-----NEAQNVLNET 937

Query: 844  YEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKD---ERFKELQEKKSQSES---EVKSC 897
              E+  Q  N Q+ +  + ++  + +  Y+   D   + F ELQ    + ES   ++   
Sbjct: 938  KSERDLQISNKQKVVADVNRLIDRFQNIYNDVVDFESKGFSELQATIRELESNKIQMHQL 997

Query: 898  KIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGG 957
            K + D    E++  K  + + +   +N++ NL   + K+++    SEI  L+        
Sbjct: 998  KEKLDLKSNEMNEEKRKLADSNNEEKNLKQNLELIDLKSQLQDIESEINELD-------- 1049

Query: 958  VSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQ----YK 1006
            V   E E  K+  E  RL      LS  N  + G M   Q     N++D    Q    YK
Sbjct: 1050 VQNAEAERDKYQEESLRLRTNFEKLSSENAGKLGEMKQLQ-----NQVDSLTHQLCTDYK 1104

Query: 1007 DIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQ 1066
            DI+K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G 
Sbjct: 1105 DIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGT 1164

Query: 1067 DIDYIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
            DID I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF
Sbjct: 1165 DIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETF 1224

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ 1184
              NCG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +    
Sbjct: 1225 GANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAA 1284

Query: 1185 HAEKYYRVAKDDHQHSIIEAQEI 1207
              + +++V +DD Q S IE  +I
Sbjct: 1285 FTDHFFKVKRDDRQKSQIEWVDI 1307


>gi|365758744|gb|EHN00571.1| Rad50p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1282

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 225/682 (32%), Positives = 342/682 (50%), Gaps = 85/682 (12%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E D F  K  Q +K  + A   K L   
Sbjct: 636  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENDSFKSKLLQELKIKTDANFEKSLKDT 692

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   LD LR++ +  + LS   E I  + ++L +  EE         ++     
Sbjct: 693  VQNEKEY---LDSLRLLDKHIISLSSINEKINNSREHLEKANEETKSSKLKLYELETKST 749

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
             ++ +KE  E  ++P      L +     +K++ DLE             + I  ELS  
Sbjct: 750  TLRNEKEFAESDIRP------LIERFTYVEKEIKDLE----------NNSKSISDELSIY 793

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL-----REEKVKAANTLRDVKKAEE- 796
             S+ D +Q  +++LRD+QR M + L   Q+R H L     ++EKVK ++ +  + K +E 
Sbjct: 794  SSSGDGIQT-VDELRDQQRKMNDSLR--QLRKHILGIQMEKDEKVKESSRIISLTKEKEL 850

Query: 797  ---ELEHLMEEKGQLD------------LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLN 841
               E+E  + +K  +D            +D ++ A  S  +S + ++  S     ++K  
Sbjct: 851  KVSEIESSLTQKQNIDNSIKSKEVNIKDIDSRVEALESRIVSLQNKRDESKNVLDQLKNE 910

Query: 842  REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRT 901
            R+ +   +QK N      ++ +  +  KE  D  + + F ELQ     +  E+ S K++ 
Sbjct: 911  RDLQISNKQK-NVADVNRLIDRYQTIYKEVIDF-ESKGFNELQ----TTVKELGSNKVQM 964

Query: 902  DEILVELD-RFKDI------VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLK 954
             E+  +LD +  ++      + + +   +N+  NL     K++     SEI  L+     
Sbjct: 965  QEVKEQLDVKMNEVNEEKRKLADSNNEEKNLRQNLELIGLKSQFQNIESEINKLD----- 1019

Query: 955  IGGVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKD 1007
               V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKD
Sbjct: 1020 ---VQNAEAERDKYQEESLRLRTNFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKD 1075

Query: 1008 IDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD 1067
            I+K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G D
Sbjct: 1076 IEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTD 1135

Query: 1068 IDYIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFC 1125
            ID I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF 
Sbjct: 1136 IDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFG 1195

Query: 1126 LNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQH 1185
             NCG++ALDEPTTNLD  N ESLA +LH I+  RK Q+NFQLIVITHDE+F   +     
Sbjct: 1196 ANCGVIALDEPTTNLDEENIESLAKSLHNIINMRKHQKNFQLIVITHDEKFLSHMNAAAF 1255

Query: 1186 AEKYYRVAKDDHQHSIIEAQEI 1207
             + +++V +DD Q S IE  +I
Sbjct: 1256 TDHFFKVKRDDRQKSQIEWVDI 1277


>gi|156393372|ref|XP_001636302.1| predicted protein [Nematostella vectensis]
 gi|156223404|gb|EDO44239.1| predicted protein [Nematostella vectensis]
          Length = 219

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/218 (55%), Positives = 161/218 (73%), Gaps = 5/218 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G    ++  I R + DL+   Y + +++H  ++I +KTT+MA+ DL++YY AL++A+M++
Sbjct: 1    GRQKGFEEEIRRFQKDLRSEMYGNAEEKHRQKVIDMKTTKMASGDLEKYYKALNRAIMKY 60

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHS-DSEGAGT----RSYSYKVLMQTGDAEL 1098
            H++KM EINKII+E W  TY+G DID I I S D +G+G     R+Y+Y+V+M  GD  L
Sbjct: 61   HSIKMAEINKIIKEYWINTYKGNDIDTIEIRSEDEDGSGASKARRTYNYRVVMIKGDLAL 120

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLASLIIRLALAETFCLNCGIL LDEPTTNLD  N ESLA  L  ++  
Sbjct: 121  DMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEENIESLANQLANVIRT 180

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            R+ Q NFQLIVITHDE F +L+G+    + YYR++K+D
Sbjct: 181  RQAQRNFQLIVITHDENFVELLGRADFVDFYYRISKND 218


>gi|328852754|gb|EGG01897.1| hypothetical protein MELLADRAFT_49933 [Melampsora larici-populina
            98AG31]
          Length = 1303

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/229 (53%), Positives = 167/229 (72%), Gaps = 2/229 (0%)

Query: 981  RCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKAL 1040
            R  G + + + N+   K ++   ++KDI  RH +QLI++KT E+AN+DLD+Y  ALD+A+
Sbjct: 1076 RLGGEIGMDRKNLKDKKSEM-DVEFKDIFNRHRNQLIKVKTVEIANQDLDKYAKALDQAI 1134

Query: 1041 MRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAELE 1099
            M++H+ KM EIN  I+ LWQ+TY+G DID I I S++E A   RSY+Y+V+M     E++
Sbjct: 1135 MKYHSHKMAEINDTIQTLWQKTYQGTDIDKILIKSENENAKSNRSYNYRVVMLKDQVEMD 1194

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLAS+IIRLALAE+F  NCGILALDEPTTNLD  N  +LA AL  I+++R
Sbjct: 1195 MRGRCSAGQKVLASIIIRLALAESFGTNCGILALDEPTTNLDKDNINALANALSEIIKER 1254

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIF 1208
            + Q NFQL+VITHDE F   +GQ    +KY+RV+++  Q SIIE Q + 
Sbjct: 1255 RDQANFQLVVITHDEDFLNQLGQSDVLDKYWRVSRNTQQKSIIERQRLM 1303


>gi|410079156|ref|XP_003957159.1| hypothetical protein KAFR_0D03760 [Kazachstania africana CBS 2517]
 gi|372463744|emb|CCF58024.1| hypothetical protein KAFR_0D03760 [Kazachstania africana CBS 2517]
          Length = 1301

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/303 (44%), Positives = 200/303 (66%), Gaps = 4/303 (1%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            EL+  K  +++ +  +RN+  N+   + K K++   S+I SL+ +  K      ++ E  
Sbjct: 995  ELNDQKQKLKDSNNEKRNLSQNIELLDLKKKLNDIKSQINSLDIQNAK-AKRDKYQHESS 1053

Query: 967  KHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN 1026
            +   E ++L +E     G M   Q  I+  ++ L+ + +KD+D +   + ++L+T  +  
Sbjct: 1054 QLRNEYEKLSAENAGRLGEMKQLQNQINSLQLQLR-SDFKDVDNKFHKEWVELQTRTLVT 1112

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR--S 1084
             D+D Y  ALD A+MR+H +KME+IN+II ELW++TY G DID I+I SD   +  R  S
Sbjct: 1113 DDIDTYSKALDSAIMRYHGLKMEDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTVRGKS 1172

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL+ETF +NCG++ALDEPTTNLD  N
Sbjct: 1173 YNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDEPTTNLDEEN 1232

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
             ESLA +L+ I+  R+ Q+NFQLIVITHDE+F   +G  Q A+ +++V +DD Q S IE 
Sbjct: 1233 IESLAKSLNNIIHFRRHQKNFQLIVITHDEKFLSHMGASQFADHFFKVRRDDRQKSQIEW 1292

Query: 1205 QEI 1207
             +I
Sbjct: 1293 VDI 1295


>gi|326479028|gb|EGE03038.1| DNA repair protein Rad50 [Trichophyton equinum CBS 127.97]
          Length = 690

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 145/317 (45%), Positives = 202/317 (63%), Gaps = 5/317 (1%)

Query: 893  EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYR-ETKAKVDKFASEIESLEER 951
            E+K  +    ++  EL+     +++ +  +R   DNL YR E+KA V+    EI  LE +
Sbjct: 346  EIKRLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRYRQESKALVN-VNREIADLESQ 404

Query: 952  VLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKR 1011
              ++   S F+ E  ++  E + L ++     G M      + +   D     YKD   +
Sbjct: 405  NAEVDR-SRFKEESERNTREHNALAAKQASKMGEMKSKDDQLMQLLADW-NTDYKDAGAK 462

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
              +  I+++TT+ A +DL RY  ALDKA+M++H +KMEEIN+II ELWQ+TYRG D+D I
Sbjct: 463  FKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGLKMEEINRIIGELWQKTYRGTDVDTI 522

Query: 1072 RIHSDSEGA-GTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGI 1130
             I SD+E + G RSY+Y+V M   DAE++MRGRCSAGQKVLAS+IIRLALAE F +NCG+
Sbjct: 523  LIRSDNESSRGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGL 582

Query: 1131 LALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYY 1190
            +ALDEPTTNLD  N  SLA +LH I+  R+ Q NFQLIVITHDE F + +      + YY
Sbjct: 583  IALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVITHDEEFLRSMQCGDFCDYYY 642

Query: 1191 RVAKDDHQHSIIEAQEI 1207
            RV++++ Q SIIE Q I
Sbjct: 643  RVSRNERQKSIIERQSI 659



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 88/130 (67%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           GE+  +S R A++D+ +P  +GVSKA+L++VIF HQDE+ WP+ +PS LKKKFD+IF A 
Sbjct: 146 GERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAL 205

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
           +YTKA++ IK L K Q +E+  YK+   + +  KD A +  +   + QE+ EAL+ +  E
Sbjct: 206 KYTKAIDNIKALRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHE 265

Query: 138 LEKSIQDIDD 147
           L K ++ + D
Sbjct: 266 LSKEMRRVAD 275


>gi|348534535|ref|XP_003454757.1| PREDICTED: DNA repair protein RAD50-like, partial [Oreochromis
            niloticus]
          Length = 1168

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/230 (53%), Positives = 167/230 (72%), Gaps = 2/230 (0%)

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
            L SE +R +G     +  I      L++ QY   ++ H D++I+++TT++ +KDL  Y  
Sbjct: 929  LKSERSREEGAQKPLEEQILEYSKQLEEDQYGKAEELHRDKMIEMRTTQLLSKDLKLYEE 988

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE--GAGTRSYSYKVLMQ 1092
            ALD+A+++FH+MKM+EIN+ IR+LW+ TYRGQDI+YI I S+ E    G RSY+Y+V+M 
Sbjct: 989  ALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIRSEVEERSEGRRSYNYRVVMM 1048

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
             GDA++ MRGRCSAGQKVLASLIIRLALAE FCL+CGILALDEPTTNLD  N +SLA AL
Sbjct: 1049 KGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILALDEPTTNLDRENIKSLADAL 1108

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              I+  R  Q +FQL++ITHDE F QL+ +    + +YR++K+  Q+S I
Sbjct: 1109 VEIIRTRSQQRHFQLLIITHDEDFVQLLVRSGCIQHFYRISKNQDQNSEI 1158



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 86/145 (59%), Gaps = 9/145 (6%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G +V  S +C D+ +E+ + +GVSK++L +VIF HQ+E+NWPL +   LK+KFD IF+ T
Sbjct: 109 GRRVSRSVKCGDLHQEITSALGVSKSVLNDVIFCHQEESNWPLSEDRVLKEKFDSIFNVT 168

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
           +Y KA   + +L   Q++ ++  + +L  L+  K+ A +LR++++Q Q    A ++ +  
Sbjct: 169 KYNKARAKMHELRLKQSRTVERCQAELSYLEKNKEKAQQLRDNVAQKQADLRASRDLILH 228

Query: 138 LEKSIQDIDDKIHHTELTLKDLRKM 162
           +E  I           L L D+RK 
Sbjct: 229 IENQI---------NPLELNDIRKF 244


>gi|407853317|gb|EKG06364.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
          Length = 1342

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 239/846 (28%), Positives = 428/846 (50%), Gaps = 86/846 (10%)

Query: 417  LNREKDVLAGDSED---RVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLP----- 468
            L R K+ L G++E    R ++  K+  LE   ++   ++ E  +   ++ +GR       
Sbjct: 525  LARHKECLGGEAEMNLLRTQITEKERFLEAEMRE--TLVPELSNFGHEMTEGRSLSQISL 582

Query: 469  LDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKR 528
            L   L+++    LR + TE  +L       D+++ +LQ    +  + + +   ++  K+ 
Sbjct: 583  LIEQLREQKLGVLRVIQTEHGEL-------DRQIAVLQQSQAQRMEEIMRENSELQRKRT 635

Query: 529  FIESKLESLNQQIFSIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVC 588
                 L+ L +    ID ++ VL+ A++  +  +++++  + M   +  F +VAR    C
Sbjct: 636  NCVKALDGLGE----IDHFEAVLEKARDLLEAARNRHHALEAMSTCYANFVQVARVEGKC 691

Query: 589  PCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK 647
            P C+R F+ E     FV+       +S E ++   LE+  A+   + L+ L     +  +
Sbjct: 692  PVCDRGFTDELALANFVELNERHHGASPEMIEKAHLEAKEAEERVRILETLEADVHDVRR 751

Query: 648  LSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQE 707
            L+  ++P  E  +  ++EEL  KS   +D        +  +E VE  ++ V+   R   +
Sbjct: 752  LAS-SVPHLELLVTRISEELANKSALLEDA-------ERKREDVEHQLKRVQDLMRTAID 803

Query: 708  IQLWQKQVDDLEYMLDSRGQGVRTME-EIQLELSGSLSTKDNLQNELEKLRDEQRYMEND 766
            +      V  L   L  R   ++ ++ E+     G   T + +  E E    E   +   
Sbjct: 804  LNAVACDVRALRQQLFRREAAIKELQAEVVTAAGGGARTYEEVSAEYESANTELHRLNVM 863

Query: 767  LSNIQIRWHTLREEKVKAANTLRDVKKAEE-ELEHLMEEKGQLDLDEKLLAEASGPLSKE 825
            L+  Q R      E  +AA +  + ++AE  +LE     +G+L   E++LA   G  +  
Sbjct: 864  LNEAQRREDG---ESDQAAASELNARRAEYYQLEMKWMRQGEL---EEVLARYKGEENGY 917

Query: 826  KEKL----------------LSDYNDLKVKLNREYEEQAEQ-KIN-FQQEIEMLLKIASK 867
            +E++                L    D   +  ++ E  A+Q +I   ++  +ML+ I  K
Sbjct: 918  RERIAAINAGQEGVREELLRLQSRLDTLQRARQDAECAAQQGRIGKIEESAQMLVGIVPK 977

Query: 868  IKEYYDLRKDERFKELQEKKSQSES-------EVKSCKIRTDEILVELDRFKDIVRNQD- 919
            +++Y+  +  E+    +E+   +E+       EV+  +    E + E  R  D    Q  
Sbjct: 978  MRDYFASKHGEQLFRAREQTQLAEASRLRAVDEVRQLR----EAIQESRRVVDEQHRQAV 1033

Query: 920  QIRRNIE---DNLNYRETKAK---VDKFASEIESLEER-VLKIGGVSTFETELGKHLLER 972
            ++ ++IE      +  E +A+   V++  +E++S E R V  I G      E    + E 
Sbjct: 1034 EVGKHIEAFEKRQSIDEDQARLQEVERSLTEMKSREIRGVAAILGADVIAGETVSRIREL 1093

Query: 973  DR-LLSEVNRC----QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
             R  +SE+ R     +G +     ++   +  L + +Y DI+KR+    ++++TTE+A  
Sbjct: 1094 IREKVSELERSRAQQEGNVEAMMQDVKNLRSQLAREKYHDIEKRYRSTFLKVQTTEIAVA 1153

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RS 1084
            D+++YY AL+KA+  +H  K+ +IN+I+ +LW+QTY+G DID + + S+ +   T   RS
Sbjct: 1154 DIEKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGSDIDTVELRSEDDVTSTTARRS 1213

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            YSY+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL+E FC +CGILALDEPTTNLD  N
Sbjct: 1214 YSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDN 1273

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHSIIE 1203
            A SLA +L  ++E+ +  ++FQLIVITHDE+F + +G  Q  + +Y + KD D   S+IE
Sbjct: 1274 ARSLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGG-QALDTFYYIRKDRDGAFSVIE 1332

Query: 1204 AQEIFD 1209
             +  FD
Sbjct: 1333 -ERTFD 1337


>gi|323303327|gb|EGA57123.1| Rad50p [Saccharomyces cerevisiae FostersB]
          Length = 1278

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 632  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 688

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 689  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 745

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 746  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSSY 789

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 790  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 848

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 849  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 906

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 907  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 966

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 967  LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1015

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1016 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1073

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1074 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1133

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1134 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1193

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1194 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1253

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1254 HFFKVKRDDRQKSQIEWVDI 1273


>gi|113913513|gb|ABI48900.1| RAD50 [Saccharomyces cariocanus]
          Length = 1312

 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 223/679 (32%), Positives = 344/679 (50%), Gaps = 79/679 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK---QRVKAASSAEHMKVLSL 623
            M Q    F R    +A     C  C R F    E+E  K    Q +K  + A   K L  
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF----ENELFKSKLLQELKTKTDANFEKTLKD 721

Query: 624  ESSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVL 681
               N   Y   L  LR++ +  + L+   E I  A++ L +  EE        D++    
Sbjct: 722  TVRNEKDY---LHNLRLLEKHIILLNSVNEKINNAQECLEKAKEETKTSKSKLDELEMNS 778

Query: 682  AQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSG 741
             ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS 
Sbjct: 779  TKLKNEKEFAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSI 822

Query: 742  SLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE-- 796
              +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E  
Sbjct: 823  YNTSEDGIQT-VDELRDQQRKMNDSLRELRKSISDLQMEKDEKVRENSRMINLIKEKELM 881

Query: 797  --ELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVK-------LNREYEEQ 847
              E+E  + +K  +D   +L       +    E L +    LK K       L++   E+
Sbjct: 882  VSEIESSLTQKQNIDDSIRLKKANIKDIDSRVEALEARIISLKNKKDEAQNILDQVKYER 941

Query: 848  AEQKINFQQEIEMLLKIASKIKEYYDLRKD---ERFKELQEKKSQSESEVKSCKIRTDEI 904
              Q  N Q+ +  + ++  + +  Y+   D   + F ELQ     +  E+K  KI+  E+
Sbjct: 942  DLQVRNKQKTVADVNRLIDRFQTIYNEVVDFEAKGFDELQ----TTIKELKLNKIKMQEL 997

Query: 905  LVELDRFKDIVR-------NQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGG 957
              +LD   + V        + +   +N++ NL   E K+++    SEI  L+        
Sbjct: 998  KEQLDLKTNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQDIESEISELD-------- 1049

Query: 958  VSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDK 1010
            V   E E  K+  E  RL      LS  N  + G M   Q  I+     L+   YKDI+K
Sbjct: 1050 VQNAEAERDKYQEESLRLRTNFEKLSSENAGKLGEMKQLQNQINSLTHQLR-TDYKDIEK 1108

Query: 1011 RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1070
             +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID 
Sbjct: 1109 NYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDT 1168

Query: 1071 IRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
            I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  NC
Sbjct: 1169 IKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANC 1228

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1188
            G++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      + 
Sbjct: 1229 GVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTDH 1288

Query: 1189 YYRVAKDDHQHSIIEAQEI 1207
            +++V +DD Q S IE  +I
Sbjct: 1289 FFKVKRDDRQKSQIEWVDI 1307


>gi|323331860|gb|EGA73272.1| Rad50p [Saccharomyces cerevisiae AWRI796]
          Length = 1278

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 632  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 688

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 689  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 745

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 746  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 789

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 790  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 848

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 849  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 906

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 907  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 966

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 967  LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1015

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1016 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1073

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1074 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1133

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1134 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1193

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1194 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1253

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1254 HFFKVKRDDRQKSQIEWVDI 1273


>gi|190409224|gb|EDV12489.1| DNA repair protein RAD50 [Saccharomyces cerevisiae RM11-1a]
          Length = 1312

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 220/678 (32%), Positives = 348/678 (51%), Gaps = 77/678 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLD------------LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNRE 843
             E+E  + +K  +D            +D ++    +  +S + +K  +     KVK  R+
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLEKVKNERD 942

Query: 844  YEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKSCK 898
             + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     +   
Sbjct: 943  IQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQLD 1002

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
            ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+        V
Sbjct: 1003 LKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD--------V 1050

Query: 959  STFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKR 1011
               E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+K 
Sbjct: 1051 QNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIEKN 1109

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
            +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID I
Sbjct: 1110 YHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTI 1169

Query: 1072 RIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCG 1129
            +I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  NCG
Sbjct: 1170 KIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCG 1229

Query: 1130 ILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKY 1189
            ++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      + +
Sbjct: 1230 VIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTDHF 1289

Query: 1190 YRVAKDDHQHSIIEAQEI 1207
            ++V +DD Q S IE  +I
Sbjct: 1290 FKVKRDDRQKSQIEWVDI 1307


>gi|6324079|ref|NP_014149.1| Rad50p [Saccharomyces cerevisiae S288c]
 gi|131782|sp|P12753.1|RAD50_YEAST RecName: Full=DNA repair protein RAD50; AltName: Full=153 kDa protein
 gi|4273|emb|CAA32919.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1255968|emb|CAA65494.1| RAD50 [Saccharomyces cerevisiae]
 gi|1302293|emb|CAA96157.1| RAD50 [Saccharomyces cerevisiae]
 gi|259149118|emb|CAY82360.1| Rad50p [Saccharomyces cerevisiae EC1118]
 gi|285814415|tpg|DAA10309.1| TPA: Rad50p [Saccharomyces cerevisiae S288c]
 gi|323352853|gb|EGA85155.1| Rad50p [Saccharomyces cerevisiae VL3]
 gi|392297102|gb|EIW08203.1| Rad50p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1312

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 940

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 941  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 1000

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 1001 LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1049

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1050 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1107

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1108 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1167

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1168 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1227

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1228 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1287

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1288 HFFKVKRDDRQKSQIEWVDI 1307


>gi|323346797|gb|EGA81076.1| Rad50p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1278

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 221/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 632  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTXANFEKTLKDT 688

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 689  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 745

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 746  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 789

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 790  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 848

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 849  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 906

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 907  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 966

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 967  LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1015

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1016 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1073

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+IJ ELW++TY G DID
Sbjct: 1074 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIJDELWKRTYSGTDID 1133

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1134 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1193

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1194 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1253

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1254 HFFKVKRDDRQKSQIEWVDI 1273


>gi|151944297|gb|EDN62575.1| Mre11-Rad50-Xrs2 protein complex member [Saccharomyces cerevisiae
            YJM789]
          Length = 1312

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 220/678 (32%), Positives = 346/678 (51%), Gaps = 77/678 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQNEKEY---LHSLRLLEKHIITLNSINEKIGNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLK------------VKLNRE 843
             E+E  + +K  +D   +   E    ++   ++L +    LK            VK  R+
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDINSRVKELEARIISLKNKKDEAQSVLDKVKNERD 942

Query: 844  YEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKSCK 898
             + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     +   
Sbjct: 943  IQVRNKQKTVADVNRLIDRFQTIYNEVVDFQAKGFDELQTTIKELELNKAQMLELKEQLD 1002

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
            ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+        V
Sbjct: 1003 LKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD--------V 1050

Query: 959  STFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDIDKR 1011
               E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+K 
Sbjct: 1051 QNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIEKN 1109

Query: 1012 HFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI 1071
            +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID I
Sbjct: 1110 YHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTI 1169

Query: 1072 RIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCG 1129
            +I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  NCG
Sbjct: 1170 KIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCG 1229

Query: 1130 ILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKY 1189
            ++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      + +
Sbjct: 1230 VIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTDHF 1289

Query: 1190 YRVAKDDHQHSIIEAQEI 1207
            ++V +DD Q S IE  +I
Sbjct: 1290 FKVKRDDRQKSQIEWVDI 1307


>gi|256272374|gb|EEU07357.1| Rad50p [Saccharomyces cerevisiae JAY291]
          Length = 1312

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 940

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 941  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 1000

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 1001 LDLKSNELNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1049

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1050 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1107

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1108 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1167

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1168 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1227

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1228 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1287

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1288 HFFKVKRDDRQKSQIEWVDI 1307


>gi|365763466|gb|EHN04994.1| Rad50p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1278

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 221/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 632  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTGANFEKTLKDT 688

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 689  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 745

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 746  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 789

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 790  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 848

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 849  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 906

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 907  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 966

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 967  LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1015

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1016 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1073

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+I+ ELW++TY G DID
Sbjct: 1074 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRILDELWKRTYSGTDID 1133

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1134 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1193

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1194 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1253

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1254 HFFKVKRDDRQKSQIEWVDI 1273


>gi|366999578|ref|XP_003684525.1| hypothetical protein TPHA_0B04210 [Tetrapisispora phaffii CBS 4417]
 gi|357522821|emb|CCE62091.1| hypothetical protein TPHA_0B04210 [Tetrapisispora phaffii CBS 4417]
          Length = 1303

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/352 (40%), Positives = 214/352 (60%), Gaps = 17/352 (4%)

Query: 864  IASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRR 923
            + + IKE+ +L  +   K   E+    +S++K+  +  D+    L + K+ + + +  ++
Sbjct: 956  LQNSIKEF-ELTGNADLKACNEELEDYKSKLKNINVAIDQKTANLSKLKEELIDSNSRKK 1014

Query: 924  NIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRL--LSEVNR 981
            N+ DNL     K K+     EI  ++        V   E +  K+  E  RL  L E   
Sbjct: 1015 NLMDNLELHSLKVKLSNTEKEINCID--------VENAERQRDKYQEEISRLRNLYEQLS 1066

Query: 982  CQGTMSVYQTNISRNKIDLKQAQ----YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALD 1037
                  + +    +N+ID    Q    YKDID ++  +  +L+T     +D++ Y  ALD
Sbjct: 1067 ADNAGKLGEIKQLQNQIDSLSHQLHTDYKDIDNKYKTEWAKLQTKTFVTEDINTYSKALD 1126

Query: 1038 KALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGTRSYSYKVLMQTGD 1095
             A+MR+H +KM++IN+II ELW++TY G D+D I+I SD  S     +SY+Y+V+M   D
Sbjct: 1127 SAIMRYHGLKMQDINRIIDELWKKTYSGTDVDSIQIRSDETSSTVKGKSYNYRVVMFKQD 1186

Query: 1096 AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRI 1155
            AEL+MRGRCSAGQKVLAS+IIRLAL+ETF +NCG++ALDEPTTNLD  N ESLA +LH I
Sbjct: 1187 AELDMRGRCSAGQKVLASIIIRLALSETFGVNCGVIALDEPTTNLDEENIESLAKSLHNI 1246

Query: 1156 MEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            ++ R+ Q+NFQLIVITHDE+F   +   Q ++ +++V +DD Q S+IE  +I
Sbjct: 1247 IQFRQHQKNFQLIVITHDEKFLNNMNASQFSDHFFKVKRDDRQKSLIEWVDI 1298


>gi|348545460|ref|XP_003460198.1| PREDICTED: DNA repair protein RAD50-like [Oreochromis niloticus]
          Length = 1394

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/230 (52%), Positives = 167/230 (72%), Gaps = 2/230 (0%)

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
            L SE +R +G     +  I      L++ QY   ++ H +++I+++TT++ +KDL  Y  
Sbjct: 805  LKSERSREEGAQKPLEEQILEYSKQLEEDQYGKAEELHRNKMIEMRTTQLLSKDLKLYEE 864

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE--GAGTRSYSYKVLMQ 1092
            ALD+A+++FH+MKM+EIN+ IR+LW+ TYRGQDI+YI I S+ E    G RSY+Y+V+M 
Sbjct: 865  ALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIRSEVEERSEGRRSYNYRVVMM 924

Query: 1093 TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
             GDA++ MRGRCSAGQKVLASLIIRLALAE FCL+CGILALDEPTTNLD  N +SLA AL
Sbjct: 925  KGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILALDEPTTNLDRENIKSLADAL 984

Query: 1153 HRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              I+  R  Q +FQL++ITHDE F QL+ +    + +YR++K+  Q+S I
Sbjct: 985  VEIIRTRSQQRHFQLLIITHDEDFVQLLVRSGCIQHFYRISKNQDQNSEI 1034



 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 150/281 (53%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G +V  S +C D+ +E+   +GVSK++L +VIF HQ+E+NWPL +   LK+KFD IF+ T
Sbjct: 124 GRRVSRSVKCGDLHQEITCALGVSKSVLNDVIFCHQEESNWPLSEDRVLKEKFDSIFNVT 183

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
           +Y KA   + +L   Q++ ++  + +L  L+  K+ A +LR++++Q Q    A ++ +  
Sbjct: 184 KYNKARAKMYELRLKQSRTVERCQAELSYLEKNKEKAQQLRDNVAQKQADLRASRDLILH 243

Query: 138 LEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEE 197
           +E  I  ++  + + ++ L+++ K++++I  + + R  + E  ++    + E  + +DE+
Sbjct: 244 IENQIDPLETLLSNIKMKLENVTKLENEIKALDSLRKQMEEHNKELEETMEEVFQGSDEQ 303

Query: 198 LKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSR 257
           L++   N +  V ++E  + + + E    D + + L +  +    E   L  EA  H   
Sbjct: 304 LQHTYENHQRTVREKEQKLQQHQEELQTFDQEYQRLTRVTNDLLLEKGRLQHEAERHTKN 363

Query: 258 MNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRL 298
             +RD  +  L +   +      PF+     +F +++  RL
Sbjct: 364 TEDRDKLVHSLSSCLEMEGYDQLPFTVSQLESFYHQVTQRL 404


>gi|349580699|dbj|GAA25858.1| K7_Rad50p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1312

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 349/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
              N   Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQNEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 940

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 941  RDIQVRNKQKTVADVNRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 1000

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 1001 LDLKSNELNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1049

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1050 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1107

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1108 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1167

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1168 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1227

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1228 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1287

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1288 HFFKVKRDDRQKSQIEWVDI 1307


>gi|403216237|emb|CCK70734.1| hypothetical protein KNAG_0F00650 [Kazachstania naganishii CBS 8797]
          Length = 1306

 Score =  243 bits (620), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 228/389 (58%), Gaps = 25/389 (6%)

Query: 831  SDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKEL---QEKK 887
            S YN  K+ L    E+     IN  +  + L  I  K+++Y    + + F  L   Q+  
Sbjct: 925  SQYNRQKLGLKLLTEKSQTDIINITKACDKLGGILDKVRQY----EQQDFNALEKCQDTI 980

Query: 888  SQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIES 947
             Q++S +K+ + + +E    L   +  +++ +  +RN+ DN+     K K+      I+ 
Sbjct: 981  KQADSTLKNIEKQLNEKTEYLYMGRQKLQDSNNEKRNLRDNIELLNLKDKLQSIIDNIKR 1040

Query: 948  LEERVLKIGGVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDL 1000
            L+        V   ETE  K+  E ++L      LS  N  + G M   Q  I    + L
Sbjct: 1041 LD--------VRNAETEREKYQQESEKLRNLYEGLSAENAGKLGEMKQLQNQIDSLSLQL 1092

Query: 1001 KQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQ 1060
              + YKD+D+++  + ++L+       D+D Y  ALD A+M++H +KME+IN+II ELW+
Sbjct: 1093 G-SDYKDVDQKYQKEWVELQARTFVTDDIDTYSKALDNAIMKYHGLKMEDINRIIDELWK 1151

Query: 1061 QTYRGQDIDYIRIHSDSEGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRL 1118
            +TY G DID I+I S+      R  SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRL
Sbjct: 1152 RTYSGTDIDTIKIRSEEVNNTVRGKSYNYRVVMFKQDAELDMRGRCSAGQKVLASIIIRL 1211

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            AL+ETF LNCG++ALDEPTTNLD  N ESLA +LH I++ RK Q+NFQLIVITHDE+F  
Sbjct: 1212 ALSETFGLNCGVIALDEPTTNLDEENIESLAQSLHNIIQMRKYQKNFQLIVITHDEKFLM 1271

Query: 1179 LIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             +   Q  + ++++ +DD Q S IE  +I
Sbjct: 1272 HMNAGQFTDHFFKIKRDDRQKSQIEWVDI 1300


>gi|50550759|ref|XP_502852.1| YALI0D15246p [Yarrowia lipolytica]
 gi|49648720|emb|CAG81040.1| YALI0D15246p [Yarrowia lipolytica CLIB122]
          Length = 1292

 Score =  242 bits (618), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 116/209 (55%), Positives = 154/209 (73%), Gaps = 4/209 (1%)

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
            ++LK +++ D+ +++   LI LKTT +AN+DL +Y  ALD A+M++H+MKM EIN II E
Sbjct: 1075 VELK-SEFLDVHEKYRKALILLKTTTVANEDLGKYGKALDSAIMQYHSMKMNEINTIIDE 1133

Query: 1058 LWQQTYRGQDIDYIRIHSDSEGAGT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
            LW+ TY G DID I I SD +  G    RSY+Y+V+M   DAEL+MRGRCSAGQKVLA++
Sbjct: 1134 LWKATYSGTDIDTILIRSDEDKPGAAKNRSYNYRVVMVKSDAELDMRGRCSAGQKVLAAI 1193

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDE 1174
            IIRLALAE F +NCG++ALDEPTTNLD  N ESLA  L  I++ R  Q+NFQLIVITHDE
Sbjct: 1194 IIRLALAECFGINCGMIALDEPTTNLDSDNIESLAKGLSNIIDARSSQKNFQLIVITHDE 1253

Query: 1175 RFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            +F   +   +H + +YRV+++  Q S IE
Sbjct: 1254 KFLTHMAASKHTDHFYRVSRNVRQKSSIE 1282


>gi|147834715|emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
          Length = 244

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/116 (96%), Positives = 115/116 (99%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           MEYKAIESVLQTINPHTGEKVCLSYRCADMDRE+PALMGVSKA+LENVIFVHQD+ANWPL
Sbjct: 108 MEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK 116
           QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ LKDAAYK
Sbjct: 168 QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYK 223


>gi|207341906|gb|EDZ69838.1| YNL250Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1312

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 221/680 (32%), Positives = 348/680 (51%), Gaps = 81/680 (11%)

Query: 571  MRQMFDPFER----VARAHHVCPCCERPFSAEEEDEFVKK--QRVKAASSAEHMKVLSLE 624
            M Q    F R    +A     C  C R F   E + F  K  Q +K  + A   K L   
Sbjct: 666  MHQTTLEFNRKALEIAERDSCCYLCSRKF---ENESFKSKLLQELKTKTDANFEKTLKDT 722

Query: 625  SSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDVLGVLA 682
                  Y   L  LR++ +  + L+   E I  ++K L +  EE        D++     
Sbjct: 723  VQTEKEY---LHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDST 779

Query: 683  QIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGS 742
            ++K +KE  E  ++P      L ++    +K++ DLE          +T+ E   ELS  
Sbjct: 780  KLKDEKELAESEIRP------LIEKFTYLEKELKDLE-------NSSKTISE---ELSIY 823

Query: 743  LSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTL---REEKVKAANTLRDVKKAEE--- 796
             +++D +Q  +++LRD+QR M + L  ++     L   ++EKV+  + + ++ K +E   
Sbjct: 824  NTSEDGIQT-VDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTV 882

Query: 797  -ELEHLMEEKGQLD------------LDEKL--LAEASGPLSKEKEKLLSDYNDLKVKLN 841
             E+E  + +K  +D            +D ++  L      L  +K++  S  +  KVK  
Sbjct: 883  SEIESSLTQKQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKDEAQSVLD--KVKNE 940

Query: 842  REYEEQAEQKI--NFQQEIEMLLKIASKIKEYYDLRKDE---RFKELQEKKSQSESEVKS 896
            R+ + + +QK   +  + I+    I +++ ++     DE     KEL+  K+Q     + 
Sbjct: 941  RDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQ 1000

Query: 897  CKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIG 956
              ++++E+  E  +  D   N ++  +N++ NL   E K+++    SEI  L+       
Sbjct: 1001 LDLKSNEVNEEKRKLAD--SNNEE--KNLKQNLELIELKSQLQHIESEISRLD------- 1049

Query: 957  GVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNISRNKIDLKQAQYKDID 1009
             V   E E  K+  E  RL      LS  N  + G M   Q  I      L+   YKDI+
Sbjct: 1050 -VQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLR-TDYKDIE 1107

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            K +  + ++L+T      D+D Y  ALD A+M++H +KM++IN+II ELW++TY G DID
Sbjct: 1108 KNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDID 1167

Query: 1070 YIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             I+I SD  S     +SY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLAL+ETF  N
Sbjct: 1168 TIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGAN 1227

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAE 1187
            CG++ALDEPTTNLD  N ESLA +LH I+  R+ Q+NFQLIVITHDE+F   +      +
Sbjct: 1228 CGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNAAAFTD 1287

Query: 1188 KYYRVAKDDHQHSIIEAQEI 1207
             +++V +DD Q S IE  +I
Sbjct: 1288 HFFKVKRDDRQKSQIEWVDI 1307


>gi|255716126|ref|XP_002554344.1| KLTH0F03058p [Lachancea thermotolerans]
 gi|238935727|emb|CAR23907.1| KLTH0F03058p [Lachancea thermotolerans CBS 6340]
          Length = 1298

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/201 (55%), Positives = 152/201 (75%), Gaps = 2/201 (0%)

Query: 1005 YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYR 1064
            YKD+D  +  + +QL+T  +   D+D Y  ALD A+M++H++KM +IN+II ELW++TY 
Sbjct: 1089 YKDVDSIYQKEWVQLQTKTLVTDDIDVYSKALDSAIMKYHSLKMHDINRIIDELWKRTYS 1148

Query: 1065 GQDIDYIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAE 1122
            G D+D I+I SD  +  A  +SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIRLAL+E
Sbjct: 1149 GTDVDTIKIKSDEVTTSARGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSE 1208

Query: 1123 TFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQ 1182
            TF +NCG++ALDEPTTNLD  N ESLA +L+ I+E R+ Q+NFQLIVITHDE+F + +G 
Sbjct: 1209 TFGVNCGVIALDEPTTNLDEENIESLAKSLNNIIEFRRHQKNFQLIVITHDEKFLRYMGA 1268

Query: 1183 RQHAEKYYRVAKDDHQHSIIE 1203
                + +Y+V +DD Q S IE
Sbjct: 1269 ADFTDHFYKVKRDDRQKSQIE 1289


>gi|403349168|gb|EJY74026.1| DNA repair protein RAD50 [Oxytricha trifallax]
          Length = 1350

 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 163/434 (37%), Positives = 256/434 (58%), Gaps = 52/434 (11%)

Query: 795  EEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINF 854
            EEEL  L ++K Q + + KL++E              ++  L+++ NRE      QK+  
Sbjct: 934  EEELMKLTKQKAQFEQELKLISENIESY---------EFEILEIENNRE------QKL-- 976

Query: 855  QQEIEMLLKIASKIKEYYDLRKD------------ERFKELQEK----------KSQSES 892
              +IE L K +S++ E+ D+               E+ + LQE+          K+Q +S
Sbjct: 977  --QIESLAKKSSRLSEFIDIMNRLYIQYQNIQSQLEKNQSLQEQLENADFQIQTKTQKKS 1034

Query: 893  EVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV 952
            +V+   I+ +E+  EL R  D +++QD++ + I +   Y++ K  V    ++I   ++ +
Sbjct: 1035 QVEE-DIKLNEL--ELRRVIDGMQSQDEVEKIISEFDRYKQLKNAVVDIQTQILDKQKII 1091

Query: 953  LKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRH 1012
             K   +     ++ + L E  +  S   +  G     Q  +   K++L + ++ DI+K+ 
Sbjct: 1092 HKKNQLKEQRDKMQQELTESIQTYS---KSSGYCISIQETLRSMKVELIEERFVDIEKKL 1148

Query: 1013 FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIR 1072
             D  I+   T+    ++   ++AL++ALM++H  KM+EINK + + W+ TY+G DID I 
Sbjct: 1149 LDLEIKYNLTKDMAIEISEKHDALEEALMKYHQEKMKEINKTLSDFWKMTYKGNDIDTIE 1208

Query: 1073 IHSDSE---GAGTRSYSYKVLMQT-GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
            I SD E    +  RSY+Y+++++T  D EL+MRGRCSAGQKVL+S+IIRL+LAETFC NC
Sbjct: 1209 IKSDDEKQPNSRIRSYNYRIVLKTYDDTELDMRGRCSAGQKVLSSIIIRLSLAETFCSNC 1268

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1188
            GILALDEPTTNLD  N E LA AL  I+E R+ QENFQLI+ITHD++F QL+G R++AE 
Sbjct: 1269 GILALDEPTTNLDVDNIEGLAGALIEIIESRRRQENFQLIIITHDQQFVQLLG-REYAEY 1327

Query: 1189 YYRVAKDDHQHSII 1202
            Y+RVAKD+  +S I
Sbjct: 1328 YWRVAKDNSGYSRI 1341


>gi|298708489|emb|CBJ30613.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 448

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/289 (45%), Positives = 187/289 (64%), Gaps = 25/289 (8%)

Query: 925  IEDNLNYRETKAKVDKFASEIESLEERVLKI------GGVSTFETE-LGKHLLERDRLLS 977
            ++DN++YR  K ++ +   E+  +E+ + K       G +   E E LGK    R  L  
Sbjct: 150  LKDNIDYRALKRELKEKKKEVADVEKEISKTDSENVRGKMEDIEEERLGK-TQTRAELKG 208

Query: 978  EVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALD 1037
             ++  +G +  Y+  ++ +        Y++I+++H  ++I+ +TTEMA  DLD+Y+ ALD
Sbjct: 209  RLHGLKGQIRGYEAKLNSD-------TYRNIEEKHRRKMIEHRTTEMAVTDLDKYWTALD 261

Query: 1038 KALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE---GAGTRSYSYKVLMQTG 1094
            KAL+RFHTMK+ +INKIIRELW  TY G+DID I I S  +   G   RSY+Y+V+M+  
Sbjct: 262  KALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGDDEDSGKAKRSYNYRVVMRKN 321

Query: 1095 DAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHR 1154
            DA L+M+GRCSAGQ+VLAS++IRLALAETFC++CGILALDEPTTNLD  N   LA AL +
Sbjct: 322  DATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHNNKVGLAHALAK 381

Query: 1155 IMEDRKGQENFQLIVITHDERFAQLI-------GQRQHAEKYYRVAKDD 1196
            I+  R  Q NFQLI ITHDE F Q +       G     E Y+R+++++
Sbjct: 382  IISSRSKQANFQLITITHDEEFVQTMRTELGTQGGFSMPEFYWRISREE 430


>gi|367012381|ref|XP_003680691.1| hypothetical protein TDEL_0C05910 [Torulaspora delbrueckii]
 gi|359748350|emb|CCE91480.1| hypothetical protein TDEL_0C05910 [Torulaspora delbrueckii]
          Length = 1305

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/290 (44%), Positives = 181/290 (62%), Gaps = 24/290 (8%)

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
            +I R I  NL+ R  +A+ DK+  E   L  R  K+   +      GK        L E+
Sbjct: 1033 EIEREI-SNLDVRNAEAERDKYQQESLRLRNRFEKLSSENA-----GK--------LGEI 1078

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
             + Q  +  +   +        +  YKD+D  +  + ++L+T      D+D Y  ALD A
Sbjct: 1079 KQLQNQIQAFTLQL--------RTDYKDVDSDYHKKWVELQTRTFVTDDIDTYSKALDSA 1130

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGTRSYSYKVLMQTGDAE 1097
            +M++H +KM++IN+II ELW++TY G D+D I+I SD  S     +SY+Y+V+M   DAE
Sbjct: 1131 IMKYHGLKMQDINRIIDELWKRTYSGTDVDSIQIRSDEVSSNVKGKSYNYRVVMYKQDAE 1190

Query: 1098 LEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIME 1157
            L+MRGRCSAGQKVLAS+IIRLAL+ETF +NCG++ALDEPTTNLD  N ESLA +L  I+E
Sbjct: 1191 LDMRGRCSAGQKVLASIIIRLALSETFGVNCGVIALDEPTTNLDEENIESLAKSLSNIIE 1250

Query: 1158 DRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
             R+ Q+NFQLIVITHDE+F   +   Q  + ++RV +DD Q S IE  +I
Sbjct: 1251 MRRHQKNFQLIVITHDEKFLNHMDASQFTDHFFRVKRDDRQKSQIEWVDI 1300


>gi|340059044|emb|CCC53415.1| RAD50 DNA repair-like protein, (fragment) [Trypanosoma vivax Y486]
          Length = 1315

 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 220/744 (29%), Positives = 364/744 (48%), Gaps = 83/744 (11%)

Query: 499  DKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAKEKR 558
            ++++  L+ K  ++ +++ K   +++ K+      L  L Q    +D ++ VL SA+E  
Sbjct: 606  ERQIMTLEQKRSQLLEDIMKESTELERKRVRCVEVLGDLEQ----LDNFEGVLASAREVL 661

Query: 559  DVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEE-DEFVK---KQRVKAASS 614
                 + +    M   +     +A A   CP C+R F +EEE   F++   KQ+  +A  
Sbjct: 662  RSVSQQSSARHAMTACYSHLVEMANASGKCPLCDRSFESEEERSNFLRLYEKQQSTSAQE 721

Query: 615  AEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAF 674
            +   +VLS     A    + L++L        +L+  ++P  E       EEL+ K    
Sbjct: 722  SPDSEVLS-----ATQRVRCLEELEADVHSVRRLTA-SVPQLEHQARLSVEELEGKRALV 775

Query: 675  DDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLE-YMLDSRGQ-GVRTM 732
            +++     +++     VE L Q     + +  EI+  Q Q+   E Y  +++G   V   
Sbjct: 776  ENIAVGERELEEQLGRVEGLAQVAAELNTVASEIKSLQYQLSRRETYSQENQGSPAVGGS 835

Query: 733  EEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRD-- 790
              +  +  GS S  D  +   E++         +      R + L  E  +  + L D  
Sbjct: 836  GSVPADGGGSGSVCDIREKTYEEISTAYEAANAEF----CRLNVLLSEAQRRGDGLTDHA 891

Query: 791  -----VKKAEEELEHLMEEKGQLDLDEKLLAEAS----------GPLSKEKEKLLSDYND 835
                  KK  E  E  M+   Q +L EK +A+            G + K++E+  +D + 
Sbjct: 892  LDSELSKKRSELCELQMKLTRQAEL-EKTIADCRKEAADYVERIGIIDKQREQFQADVDG 950

Query: 836  LKVKLN-----REYEEQAEQKINFQQEIEMLLKIAS---KIKEYYDLRKDERFKELQEKK 887
               +L      RE   +A       Q    LL +++   K++ Y   ++ ++  E +EK 
Sbjct: 951  GGRELQTLQERREELHRAAHDGRLGQLKAALLALSNLVPKLRSYITSQQGDKLLEAREK- 1009

Query: 888  SQSESEVKSCKIRTDEIL--VELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
                       +RT+E L  V  D  K+      + ++ IE+ L       K+ +F    
Sbjct: 1010 -----------LRTEEELRTVAEDTLKNTRSTMQEKQQAIEEELRCVTEVEKLIEFVERQ 1058

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQ--GTMSVYQTNISRNKIDLKQA 1003
            ESL E   ++  V                  S+  R Q  G M     ++S  K  L + 
Sbjct: 1059 ESLREDEKRLQQVQE----------------SQRTRAQQEGLMEAMLQDVSNLKSQLSRD 1102

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
            +YKDI+KR+    I+++TTE+A  D+++YY AL+KA+  +H  K+ +IN+I+  LW+ TY
Sbjct: 1103 KYKDIEKRYRTTFIKVQTTEVAVADVEKYYRALEKAVQTYHQEKIAQINEILAGLWRLTY 1162

Query: 1064 RGQDIDYIRIHSDSEGAGT---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            +G DID I + S+ +   T   RSYSY+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL
Sbjct: 1163 KGSDIDTIELRSEDDATSTTVRRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLAL 1222

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLI 1180
            +E FC +CGILALDEPTTNLD  NA SLA +L +++ +R+  ++FQLI+ITHDE F + +
Sbjct: 1223 SEAFCCDCGILALDEPTTNLDEDNARSLAESLRQLIVNRRSVKHFQLIIITHDEHFVRAL 1282

Query: 1181 GQRQHAEKYYRVAKD-DHQHSIIE 1203
            G  Q  + YY V KD +   S+IE
Sbjct: 1283 GG-QALDTYYFVRKDREGAFSVIE 1305


>gi|344301138|gb|EGW31450.1| hypothetical protein SPAPADRAFT_67510 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1307

 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 195/664 (29%), Positives = 333/664 (50%), Gaps = 88/664 (13%)

Query: 581  VARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRM 640
            +A  ++ C  C+R F A+   +F+ + ++    + +  K+ ++ + + +   ++LD ++ 
Sbjct: 679  IAEKNNQCLLCKRSFEADSLQKFIAELKL----TVDEKKIKAIHNQSVE-IKKELDDVKA 733

Query: 641  VYEEYVKLSK-----ETIPVAEKNLHE----LTEELDQKSQAFDDVLGVLAQIKADKESV 691
            +  + + L +     ET    +K L E    L E+L Q             +++  + S+
Sbjct: 734  INLDIINLRECQKQIETFKSIKKELQEKESLLLEQLQQAK----------VELQTQQSSL 783

Query: 692  EV---LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDN 748
            +V   L +P+    RL  E+   + QVD+L   L+  G  V +  E+Q            
Sbjct: 784  DVGLNLRRPISEIVRLNTEVNDTEMQVDELSEELNDFGTVVLSYSELQA----------- 832

Query: 749  LQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQL 808
            LQ E   L  E+R   N+ +  +   +  + E  +  N ++D++    +LE  + E   +
Sbjct: 833  LQQEKNSLMKEERLKVNNYTESK---YVAQRELQRLENRVKDIRLQISKLETSLSEIKNI 889

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQ------------ 856
               +  + E    L    EKL  + +  K+ LN     +AE+    +Q            
Sbjct: 890  ---KDSITETEANL----EKLEKNIDQSKITLNELNSIKAERITTLKQVQEEHHHAEKMI 942

Query: 857  --EIEMLLKIASKIKEY------YDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVEL 908
              ++E + +++S  K        ++     + +E   K  Q  SE+ + K   +E L  +
Sbjct: 943  HNDVEKVSRLSSSFKVLQEAIFTFENHDSVKLEENTSKMQQVSSEIDTLKDTIEENLSSV 1002

Query: 909  DRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKH 968
               +  V    +I  NI  N++YR          +++  LE+   +I G+     +  K 
Sbjct: 1003 SALEKQVYESSRIEHNIIANIDYR----------AQLRKLEQAEFEINGIDIENAQNRKE 1052

Query: 969  -LLERDR-LLSEVNRCQGTMSVYQTNISRNKIDLK------QAQYKDIDKRHFDQLIQLK 1020
               E+ R L  E+       +     + + K  +K      + +YK++++ + ++ I+L+
Sbjct: 1053 EYQEKSRKLRQEITNLTSQHAGKIGEVKQIKDQIKGLHKELETEYKNVNQAYHEEWIKLQ 1112

Query: 1021 TTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--E 1078
            T  + + D+  Y  ALD A+M++H++KME+IN+I+ ELW QTY+G DI  I I SD   +
Sbjct: 1113 TNMLVSNDIQNYSKALDNAIMKYHSIKMEDINRILGELWSQTYKGSDISTIAIKSDVNLQ 1172

Query: 1079 GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
              G RSY+Y+V+M    +EL+MRGRCSAGQKVLAS++IRLALAE F  NCG++ALDEPTT
Sbjct: 1173 AKGNRSYNYRVVMVKNASELDMRGRCSAGQKVLASILIRLALAECFGANCGMIALDEPTT 1232

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  N+ESLA AL+ I+E RK Q NFQLIVITHDE+F   I   +  + +YR+ +D+  
Sbjct: 1233 NLDSENSESLAEALNHIIEYRKAQSNFQLIVITHDEKFLTHIRGDRFTDHFYRIQRDEGN 1292

Query: 1199 HSII 1202
             S I
Sbjct: 1293 KSRI 1296


>gi|221487186|gb|EEE25432.1| DNA repair protein Rad50, putative [Toxoplasma gondii GT1]
          Length = 1599

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 148/213 (69%), Gaps = 21/213 (9%)

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            A Y D+++++   L+  +   MA KDLDRY+ ALDKALM++H+MKM+EIN  ++ELWQ  
Sbjct: 1371 AVYNDVEEKYRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTM 1430

Query: 1063 YRGQDIDYIRIHSDSE----GA-----------------GTRSYSYKVLMQTGDAELEMR 1101
            Y G DID+I I SD+E    GA                 G RSY+Y+V+M  G  EL+MR
Sbjct: 1431 YTGHDIDFIAIRSDTEEQTAGAPTSLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMR 1490

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQK+LASLIIRLALAETFC++CG+LALDEPTTNLD  N ESLA AL  ++E R+ 
Sbjct: 1491 GRCSAGQKILASLIIRLALAETFCVHCGVLALDEPTTNLDRFNCESLAKALAALVEARRT 1550

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
              +FQLI+ITHDE+F   + +    +K+Y++ K
Sbjct: 1551 SASFQLILITHDEQFVMKLARHGLCDKFYKITK 1583



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TG+K  +  +CAD+D ++P L+G+ +A+LE+V+F HQ+E+ WPL D   LKKKFD +F A
Sbjct: 122 TGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVFCHQEESCWPLSDMQVLKKKFDQLFGA 181

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK 116
           TRY KALE I+ + K   Q +   K +  +LQ +  AA++
Sbjct: 182 TRYVKALESIRAIRK---QHVSAAKDRQHDLQLV--AAHR 216


>gi|401407546|ref|XP_003883222.1| putative DNA repair protein RAD50 [Neospora caninum Liverpool]
 gi|325117638|emb|CBZ53190.1| putative DNA repair protein RAD50 [Neospora caninum Liverpool]
          Length = 1584

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 110/211 (52%), Positives = 146/211 (69%), Gaps = 19/211 (9%)

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            A YKD+++++   L+  +   M   DLDRY+ ALDKALM++H+MKM+EIN  ++ELWQ  
Sbjct: 1358 AVYKDVEEKYRSALVDAEIEAMVTSDLDRYHRALDKALMKYHSMKMQEINATMKELWQTM 1417

Query: 1063 YRGQDIDYIRIHSDSE-------------------GAGTRSYSYKVLMQTGDAELEMRGR 1103
            Y G DID+I I SD+E                    AG RSY+Y+V+M  G  EL+MRGR
Sbjct: 1418 YTGHDIDFIAIRSDTEDQAGLAPLSLFGNASSPPPAAGQRSYNYRVVMVKGAVELDMRGR 1477

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQK+LASLIIRLALAETFC++CG+LALDEPTTNLD  N ESLA AL  ++E R+   
Sbjct: 1478 CSAGQKILASLIIRLALAETFCVHCGVLALDEPTTNLDRYNCESLAKALAALVEARRTSA 1537

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            +FQLI+ITHDE+F   + +    +K+Y++ K
Sbjct: 1538 SFQLILITHDEQFVMKLARHGLCDKFYKITK 1568



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 65/96 (67%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +K +E  LQ  +  TG+K  +  +CAD+D ++P L+G+ +A+LE+V+F HQ+E+ WPL +
Sbjct: 115 FKQLEPYLQLKDSSTGQKASIGNKCADIDVQLPGLLGIHRAVLEHVVFCHQEESCWPLSE 174

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIK 98
              LKKKFD +F ATRY KALE I+ + K    E K
Sbjct: 175 MQVLKKKFDQLFGATRYVKALECIRTIRKQHVSEAK 210


>gi|237831333|ref|XP_002364964.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49]
 gi|211962628|gb|EEA97823.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49]
          Length = 1599

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 148/213 (69%), Gaps = 21/213 (9%)

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            A Y D+++++   L+  +   MA KDLDRY+ ALDKALM++H+MKM+EIN  ++ELWQ  
Sbjct: 1371 AVYNDVEEKYRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTM 1430

Query: 1063 YRGQDIDYIRIHSDSE----GA-----------------GTRSYSYKVLMQTGDAELEMR 1101
            Y G DID+I I SD+E    GA                 G RSY+Y+V+M  G  EL+MR
Sbjct: 1431 YTGHDIDFIAIRSDTEEQTAGAPASLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMR 1490

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQK+LASLIIRLALAETFC++CG+LALDEPTTNLD  N ESLA AL  ++E R+ 
Sbjct: 1491 GRCSAGQKILASLIIRLALAETFCVHCGVLALDEPTTNLDRFNCESLAKALAALVEARRT 1550

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
              +FQLI+ITHDE+F   + +    +K+Y++ K
Sbjct: 1551 SASFQLILITHDEQFVMKLARHGLCDKFYKITK 1583



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TG+K  +  +CAD+D ++P L+G+ +A+LE+V+F HQ+E+ WPL D   LKKKFD +F A
Sbjct: 122 TGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVFCHQEESCWPLSDMQVLKKKFDQLFGA 181

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK 116
           TRY KALE I+ + K   Q +   K +  +LQ +  AA++
Sbjct: 182 TRYVKALESIRAIRK---QHVSAAKDRQHDLQLV--AAHR 216


>gi|221506871|gb|EEE32488.1| DNA repair protein Rad50, putative [Toxoplasma gondii VEG]
          Length = 1599

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 148/213 (69%), Gaps = 21/213 (9%)

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            A Y D+++++   L+  +   MA KDLDRY+ ALDKALM++H+MKM+EIN  ++ELWQ  
Sbjct: 1371 AVYNDVEEKYRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTM 1430

Query: 1063 YRGQDIDYIRIHSDSE----GA-----------------GTRSYSYKVLMQTGDAELEMR 1101
            Y G DID+I I SD+E    GA                 G RSY+Y+V+M  G  EL+MR
Sbjct: 1431 YTGHDIDFIAIRSDTEEQTAGAPASLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMR 1490

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKG 1161
            GRCSAGQK+LASLIIRLALAETFC++CG+LALDEPTTNLD  N ESLA AL  ++E R+ 
Sbjct: 1491 GRCSAGQKILASLIIRLALAETFCVHCGVLALDEPTTNLDRFNCESLAKALAALVEARRT 1550

Query: 1162 QENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
              +FQLI+ITHDE+F   + +    +K+Y++ K
Sbjct: 1551 SASFQLILITHDEQFVMKLARHGLCDKFYKITK 1583



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TG+K  +  +CAD+D ++P L+G+ +A+LE+V+F HQ+E+ WPL D   LKKKFD +F A
Sbjct: 122 TGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVFCHQEESCWPLSDMQVLKKKFDQLFGA 181

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYK 116
           TRY KALE I+ + K   Q +   K +  +LQ +  AA++
Sbjct: 182 TRYVKALESIRAIRK---QHVSAAKDRQHDLQLV--AAHR 216


>gi|444314453|ref|XP_004177884.1| hypothetical protein TBLA_0A05720 [Tetrapisispora blattae CBS 6284]
 gi|387510923|emb|CCH58365.1| hypothetical protein TBLA_0A05720 [Tetrapisispora blattae CBS 6284]
          Length = 1307

 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/337 (41%), Positives = 204/337 (60%), Gaps = 25/337 (7%)

Query: 882  ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKF 941
            EL+E ++Q E+  K   IR+     +LDR K  + + +  R+N++ N+     +  ++  
Sbjct: 979  ELREYQAQLENLSKDIDIRS----ADLDRKKQTLNDSNNERKNLKQNIELLNLQFDINTI 1034

Query: 942  ASEIESLEERVLKIGGVSTFETELGKHLLERDRL------LSEVNRCQ-GTMSVYQTNIS 994
              EI  L         +   E E  K+  E  RL      LS  N  + G M   Q  I+
Sbjct: 1035 RREINEL--------NLQNAEAERDKYQQESARLRSLFEQLSAENAGKIGEMKQLQNQIT 1086

Query: 995  RNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKI 1054
                 L+   YK ++ ++  + +QLKT    N D+D Y  ALD A+M++H++KME+IN  
Sbjct: 1087 TLSQQLR-VDYKHVNDKYHTEWVQLKTKLFVNDDIDTYSLALDTAIMKYHSLKMEDINTT 1145

Query: 1055 IRELWQQTYRGQDIDYIRIHSD---SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVL 1111
            I ELW++TY G D+D I+I SD   S   G +SY+Y+V+M   DAEL+MRGRCSAGQKVL
Sbjct: 1146 IDELWKRTYSGTDVDSIKIRSDEVKSTQKG-KSYNYRVVMYKQDAELDMRGRCSAGQKVL 1204

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF-QLIVI 1170
            AS+IIRLAL+ETF +NCG++ALDEPTTNLD  N ESLA +LH I++ RK Q+ F  LIVI
Sbjct: 1205 ASIIIRLALSETFGINCGVIALDEPTTNLDEENIESLARSLHNIIQIRKNQKKFYTLIVI 1264

Query: 1171 THDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            THDE+F + +   Q  + ++++ +D  Q S+IE  +I
Sbjct: 1265 THDEKFLKHMDAAQFTDHFFKIKRDARQKSLIEWVDI 1301


>gi|219118130|ref|XP_002179846.1| Rad50 DNA repair/recombination protein [Phaeodactylum tricornutum
            CCAP 1055/1]
 gi|217408899|gb|EEC48832.1| Rad50 DNA repair/recombination protein [Phaeodactylum tricornutum
            CCAP 1055/1]
          Length = 1387

 Score =  232 bits (592), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 166/500 (33%), Positives = 268/500 (53%), Gaps = 37/500 (7%)

Query: 730  RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANT-- 787
            R +E ++ E++ ++  KD L  ++  L  E   + N++S++            KAANT  
Sbjct: 893  RDLETVEREMTRNIKEKDTLMLKINDLNREMMNLNNEVSDL----------ATKAANTDK 942

Query: 788  -LRDVKKAEEELEHLMEEKGQL-------DLDEKLLAEASGPLSKEKEKLLSDYNDLKVK 839
             LRD +    E +   E K +L          EK + ++ GPL  EK K+  D    +  
Sbjct: 943  ALRDKEAKYVESQQAAERKMELTRVLQEISAAEKEIQKSMGPL-HEKIKVKEDTKRQQRY 1001

Query: 840  LNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCK 898
               E E   +  ++ F+ +   L +I+ +I+E+    K ++  ++  + ++  +      
Sbjct: 1002 ATNEQEHHLQDALSQFRNDFNQLREISRQIEEHTSSDKGQKDVDVSSQMTKVLALRNKMV 1061

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
                 +  ELD     V +Q++ ++ ++ N++      ++ +    I S +E    I G 
Sbjct: 1062 AELQVLRPELDGLMTAVNDQERHKKQLKANIDVLAANKQIQELEEGINSFQEERESIDGA 1121

Query: 959  STFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQ 1018
             T    L      +++  S  +R +G        I   K  L    YK++D++    LI 
Sbjct: 1122 DTASERLSNAKSTKEKQASMKSRIEGRWHEIIEQIRAVKRKLSSPDYKNVDEKFRIALID 1181

Query: 1019 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE 1078
            ++TT++A++DL +Y NALDKA+++FH +K+++INKI+RELW  TY+G+DI  I + S  E
Sbjct: 1182 VETTQIASEDLKKYGNALDKAILKFHHVKIDDINKIVRELWLLTYKGEDISSIELVSGQE 1241

Query: 1079 GAGTR---SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
             AG+R   SY+Y+V+M  G ++L+MRGRCSAGQ+VLAS++IRLALAETFC+NCG +ALDE
Sbjct: 1242 -AGSRAQKSYNYRVVMTKGTSKLDMRGRCSAGQRVLASIVIRLALAETFCINCGCIALDE 1300

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEK 1188
            PT NLD    + LA AL +I+  R  Q NFQLI+ITHDE F  ++             EK
Sbjct: 1301 PTVNLDHRTKKGLAVALAQIIASRSQQRNFQLILITHDEEFVAMMKTELSTLTGFSMPEK 1360

Query: 1189 YYRV----AKDDHQHSIIEA 1204
            Y++V    A D   +S I A
Sbjct: 1361 YFQVRRELASDGKYYSKISA 1380



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 156/271 (57%), Gaps = 18/271 (6%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           M +K ++ VL+ ++P+TG++V LS++C ++D+++PAL+GVSK+ILE+V+F HQ++A+WPL
Sbjct: 80  MTFKQLDGVLRMMDPNTGQRVSLSHKCTELDKQLPALLGVSKSILEHVVFCHQEDASWPL 139

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            + + LKK+FDDIF +TRYTKAL+  +K  K+    +K  K++L  L + K AA   R+ 
Sbjct: 140 MEGAVLKKRFDDIFDSTRYTKALDAFRKTEKEMTATVKDLKIELAGLNSSKIAADGFRKD 199

Query: 121 ISQDQEKTEALKNQMQELEKSI----------QDIDDKIHHTELTLKDLRKMQDQISTMT 170
           +   QE  E L+ + Q++ + I          Q I+ KI++ +  +  L+  Q Q+  + 
Sbjct: 200 LVGYQEALETLEEEKQQVVEGIAEADRDIQVYQGIEAKINNVDAKIDSLKNQQAQLVQVR 259

Query: 171 ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
             R  + E+   +        + + +EL+   ++F G V+++     K+++    M+ ++
Sbjct: 260 MTRQQMLEEDLTK--------KHSQQELEQMLDDFGGKVSEQLDQHQKMQQRYEGMEKEV 311

Query: 231 KFLEQNIDAYTAEITNLLSEAGAHMSRMNER 261
             L        + +  L +E  AH  R+ ER
Sbjct: 312 DTLRHEEIRLNSLLGKLSAEKEAHEGRLLER 342


>gi|219118128|ref|XP_002179845.1| RAD50 recombination protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408898|gb|EEC48831.1| RAD50 recombination protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1436

 Score =  232 bits (592), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/500 (33%), Positives = 268/500 (53%), Gaps = 37/500 (7%)

Query: 730  RTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANT-- 787
            R +E ++ E++ ++  KD L  ++  L  E   + N++S++            KAANT  
Sbjct: 942  RDLETVEREMTRNIKEKDTLMLKINDLNREMMNLNNEVSDL----------ATKAANTDK 991

Query: 788  -LRDVKKAEEELEHLMEEKGQL-------DLDEKLLAEASGPLSKEKEKLLSDYNDLKVK 839
             LRD +    E +   E K +L          EK + ++ GPL  EK K+  D    +  
Sbjct: 992  ALRDKEAKYVESQQAAERKMELTRVLQEISAAEKEIQKSMGPL-HEKIKVKEDTKRQQRY 1050

Query: 840  LNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCK 898
               E E   +  ++ F+ +   L +I+ +I+E+    K ++  ++  + ++  +      
Sbjct: 1051 ATNEQEHHLQDALSQFRNDFNQLREISRQIEEHTSSDKGQKDVDVSSQMTKVLALRNKMV 1110

Query: 899  IRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGV 958
                 +  ELD     V +Q++ ++ ++ N++      ++ +    I S +E    I G 
Sbjct: 1111 AELQVLRPELDGLMTAVNDQERHKKQLKANIDVLAANKQIQELEEGINSFQEERESIDGA 1170

Query: 959  STFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQ 1018
             T    L      +++  S  +R +G        I   K  L    YK++D++    LI 
Sbjct: 1171 DTASERLSNAKSTKEKQASMKSRIEGRWHEIIEQIRAVKRKLSSPDYKNVDEKFRIALID 1230

Query: 1019 LKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE 1078
            ++TT++A++DL +Y NALDKA+++FH +K+++INKI+RELW  TY+G+DI  I + S  E
Sbjct: 1231 VETTQIASEDLKKYGNALDKAILKFHHVKIDDINKIVRELWLLTYKGEDISSIELVSGQE 1290

Query: 1079 GAGTR---SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
             AG+R   SY+Y+V+M  G ++L+MRGRCSAGQ+VLAS++IRLALAETFC+NCG +ALDE
Sbjct: 1291 -AGSRAQKSYNYRVVMTKGTSKLDMRGRCSAGQRVLASIVIRLALAETFCINCGCIALDE 1349

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEK 1188
            PT NLD    + LA AL +I+  R  Q NFQLI+ITHDE F  ++             EK
Sbjct: 1350 PTVNLDHRTKKGLAVALAQIIASRSQQRNFQLILITHDEEFVAMMKTELSTLTGFSMPEK 1409

Query: 1189 YYRV----AKDDHQHSIIEA 1204
            Y++V    A D   +S I A
Sbjct: 1410 YFQVRRELASDGKYYSKISA 1429



 Score =  147 bits (371), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 156/271 (57%), Gaps = 18/271 (6%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           M +K ++ VL+ ++P+TG++V LS++C ++D+++PAL+GVSK+ILE+V+F HQ++A+WPL
Sbjct: 129 MTFKQLDGVLRMMDPNTGQRVSLSHKCTELDKQLPALLGVSKSILEHVVFCHQEDASWPL 188

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            + + LKK+FDDIF +TRYTKAL+  +K  K+    +K  K++L  L + K AA   R+ 
Sbjct: 189 MEGAVLKKRFDDIFDSTRYTKALDAFRKTEKEMTATVKDLKIELAGLNSSKIAADGFRKD 248

Query: 121 ISQDQEKTEALKNQMQELEKSI----------QDIDDKIHHTELTLKDLRKMQDQISTMT 170
           +   QE  E L+ + Q++ + I          Q I+ KI++ +  +  L+  Q Q+  + 
Sbjct: 249 LVGYQEALETLEEEKQQVVEGIAEADRDIQVYQGIEAKINNVDAKIDSLKNQQAQLVQVR 308

Query: 171 ARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
             R  + E+   +        + + +EL+   ++F G V+++     K+++    M+ ++
Sbjct: 309 MTRQQMLEEDLTK--------KHSQQELEQMLDDFGGKVSEQLDQHQKMQQRYEGMEKEV 360

Query: 231 KFLEQNIDAYTAEITNLLSEAGAHMSRMNER 261
             L        + +  L +E  AH  R+ ER
Sbjct: 361 DTLRHEEIRLNSLLGKLSAEKEAHEGRLLER 391


>gi|254567069|ref|XP_002490645.1| DNA repair protein RAD50 [Komagataella pastoris GS115]
 gi|238030441|emb|CAY68365.1| DNA repair protein RAD50 [Komagataella pastoris GS115]
          Length = 1323

 Score =  231 bits (590), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 198/667 (29%), Positives = 347/667 (52%), Gaps = 43/667 (6%)

Query: 560  VQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMK 619
            +Q SK N A   +   +   ++A+ H  C  C+R  + +E    +    V  + + E   
Sbjct: 683  LQNSKLNWA--TKNFNETALKIAKEHQYCILCKRELNHDE----LGPVMVTISENIEKAN 736

Query: 620  VLSLESSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDV 677
               L S   D   Q LD L+ + ++       + +I  A   L+EL      K+   DD+
Sbjct: 737  D-DLYSKEKDRIKQDLDDLKSIRDDISNFRNLEGSIASANDELNEL------KTFVSDDL 789

Query: 678  LGV---LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEE 734
              V   L Q+++D  S+E L + V    +L +++  +  +   +E  L + G   +T+ E
Sbjct: 790  ARVSSELEQLESDLVSLESLRKHVVEISKLQEDLSHYYVENKSIESELSAYGVPAKTLSE 849

Query: 735  IQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA 794
            +Q +L+G       L+ + + L++++ +   +LS ++     ++++++  +N  + +   
Sbjct: 850  LQEDLNGKNFQLKELRRQADDLKEQREFSNRELSMLE---GNVKDKRLLISNFEKSL--- 903

Query: 795  EEELEHLMEEKGQLDLDEKLLAEA--SGPLSKEKEKLLSD-YNDLKVKLNREYEEQAEQK 851
               +  L  EKG +D ++  + E   +G    E  KL  D  N LK  +    EE+    
Sbjct: 904  ---MIKLNLEKG-IDENKARIDELQQTGETVLESMKLTKDRLNKLKDNVKTLEEERDSTL 959

Query: 852  INFQQEIEM-------LLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
               Q  +E        L+++ S + +Y +L  +   ++ ++     ++ +K  + + +++
Sbjct: 960  TQLQSNVEQFKTVQDSLVRLNSFVNKY-ELEDEPILRQCEKNSEHLKASIKDAEGQLNKL 1018

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
              +++  +  +   D   RNI+ NL+ R    ++ +    IESL+ R         F+ E
Sbjct: 1019 HEKVNVLEKQLSEADTEERNIKFNLDLRSLNKELVQIEESIESLD-RQNATSKRQEFQKE 1077

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
                     RL S  +   G +S  Q  I     ++K+  Y+ ++  ++ + ++L+T   
Sbjct: 1078 TAILRESYSRLSSAHSSKMGEVSQLQKQIQSITEEIKR-DYEHVEDEYYQEYLKLQTKMF 1136

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGT 1082
             + D+  Y   LD A+M++H++KMEEIN+II ELW++TY G D+D I I SD  ++  G 
Sbjct: 1137 ISNDISVYSKGLDNAVMKYHSIKMEEINRIIDELWKRTYSGTDVDTIMIKSDMNTQVKGN 1196

Query: 1083 RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1142
            RSY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLALAE F + CG++ALDEPTTNLD 
Sbjct: 1197 RSYNYRVVMMKEDVELDMRGRCSAGQKVLASIIIRLALAECFGVGCGMIALDEPTTNLDE 1256

Query: 1143 PNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             N ESLA AL+ I+  R  Q+NFQLIVITHDE F + +   +  + ++R+++++ Q S I
Sbjct: 1257 ENIESLAKALNSIIHLRMSQKNFQLIVITHDEHFLRHMNATEFCDHFFRISRNERQKSQI 1316

Query: 1203 EAQEIFD 1209
               + FD
Sbjct: 1317 SMVKNFD 1323


>gi|149241853|ref|XP_001526369.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146450492|gb|EDK44748.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1311

 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/203 (52%), Positives = 151/203 (74%), Gaps = 2/203 (0%)

Query: 1002 QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQ 1061
            + +YK++++ + ++ I+L+T  + + D+  Y  ALD A+M+FH++KME+IN+I+ +LW Q
Sbjct: 1098 ETEYKNVNELYHEEWIKLQTNLLVSNDIQNYSKALDNAIMKFHSIKMEDINRILGDLWSQ 1157

Query: 1062 TYRGQDIDYIRIHSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1119
            TY+G DI  I I SD   +  G RSY+Y+V+M   ++EL+MRGRCSAGQKVLAS++IRLA
Sbjct: 1158 TYKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKDNSELDMRGRCSAGQKVLASILIRLA 1217

Query: 1120 LAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQL 1179
            LAE F  NCG++ALDEPTTNLD  NAE+LA AL+RI+E RK Q NFQLIVITHDE+F   
Sbjct: 1218 LAECFGANCGMIALDEPTTNLDNENAEALALALNRIIEYRKQQLNFQLIVITHDEKFLTH 1277

Query: 1180 IGQRQHAEKYYRVAKDDHQHSII 1202
            I   +  + +YR+ +D+   S I
Sbjct: 1278 IQGDRFTDHFYRIQRDEKAKSRI 1300


>gi|328351032|emb|CCA37432.1| DNA repair protein RAD50 [Komagataella pastoris CBS 7435]
          Length = 1342

 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 198/667 (29%), Positives = 347/667 (52%), Gaps = 43/667 (6%)

Query: 560  VQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMK 619
            +Q SK N A   +   +   ++A+ H  C  C+R  + +E    +    V  + + E   
Sbjct: 702  LQNSKLNWA--TKNFNETALKIAKEHQYCILCKRELNHDE----LGPVMVTISENIEKAN 755

Query: 620  VLSLESSNADSYFQQLDKLRMVYEEYVKLS--KETIPVAEKNLHELTEELDQKSQAFDDV 677
               L S   D   Q LD L+ + ++       + +I  A   L+EL      K+   DD+
Sbjct: 756  D-DLYSKEKDRIKQDLDDLKSIRDDISNFRNLEGSIASANDELNEL------KTFVSDDL 808

Query: 678  LGV---LAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEE 734
              V   L Q+++D  S+E L + V    +L +++  +  +   +E  L + G   +T+ E
Sbjct: 809  ARVSSELEQLESDLVSLESLRKHVVEISKLQEDLSHYYVENKSIESELSAYGVPAKTLSE 868

Query: 735  IQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKA 794
            +Q +L+G       L+ + + L++++ +   +LS ++     ++++++  +N  + +   
Sbjct: 869  LQEDLNGKNFQLKELRRQADDLKEQREFSNRELSMLE---GNVKDKRLLISNFEKSL--- 922

Query: 795  EEELEHLMEEKGQLDLDEKLLAEA--SGPLSKEKEKLLSD-YNDLKVKLNREYEEQAEQK 851
               +  L  EKG +D ++  + E   +G    E  KL  D  N LK  +    EE+    
Sbjct: 923  ---MIKLNLEKG-IDENKARIDELQQTGETVLESMKLTKDRLNKLKDNVKTLEEERDSTL 978

Query: 852  INFQQEIEM-------LLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEI 904
               Q  +E        L+++ S + +Y +L  +   ++ ++     ++ +K  + + +++
Sbjct: 979  TQLQSNVEQFKTVQDSLVRLNSFVNKY-ELEDEPILRQCEKNSEHLKASIKDAEGQLNKL 1037

Query: 905  LVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE 964
              +++  +  +   D   RNI+ NL+ R    ++ +    IESL+ R         F+ E
Sbjct: 1038 HEKVNVLEKQLSEADTEERNIKFNLDLRSLNKELVQIEESIESLD-RQNATSKRQEFQKE 1096

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
                     RL S  +   G +S  Q  I     ++K+  Y+ ++  ++ + ++L+T   
Sbjct: 1097 TAILRESYSRLSSAHSSKMGEVSQLQKQIQSITEEIKR-DYEHVEDEYYQEYLKLQTKMF 1155

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGT 1082
             + D+  Y   LD A+M++H++KMEEIN+II ELW++TY G D+D I I SD  ++  G 
Sbjct: 1156 ISNDISVYSKGLDNAVMKYHSIKMEEINRIIDELWKRTYSGTDVDTIMIKSDMNTQVKGN 1215

Query: 1083 RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG 1142
            RSY+Y+V+M   D EL+MRGRCSAGQKVLAS+IIRLALAE F + CG++ALDEPTTNLD 
Sbjct: 1216 RSYNYRVVMMKEDVELDMRGRCSAGQKVLASIIIRLALAECFGVGCGMIALDEPTTNLDE 1275

Query: 1143 PNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             N ESLA AL+ I+  R  Q+NFQLIVITHDE F + +   +  + ++R+++++ Q S I
Sbjct: 1276 ENIESLAKALNSIIHLRMSQKNFQLIVITHDEHFLRHMNATEFCDHFFRISRNERQKSQI 1335

Query: 1203 EAQEIFD 1209
               + FD
Sbjct: 1336 SMVKNFD 1342


>gi|147767131|emb|CAN76605.1| hypothetical protein VITISV_012934 [Vitis vinifera]
          Length = 709

 Score =  231 bits (588), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 135/146 (92%)

Query: 306 EDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQI 365
           E++ KS E+ LK+AWD Y+DAND WK+IEAQKQAK+EIK+GILK I+EKENERDSFELQI
Sbjct: 545 EEESKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEEKENERDSFELQI 604

Query: 366 SNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLA 425
           SN++LSHIDERE  +RIEVERKTNQLAEREFE NIRQKQSEL++++QKIKALNREKD++A
Sbjct: 605 SNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNREKDIMA 664

Query: 426 GDSEDRVKLALKKAELENHKKKHKKI 451
            DSEDRVKL+LKK ELENHKKKH+K+
Sbjct: 665 VDSEDRVKLSLKKGELENHKKKHQKM 690


>gi|357603405|gb|EHJ63748.1| putative RAD50-like protein [Danaus plexippus]
          Length = 1257

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 189/642 (29%), Positives = 318/642 (49%), Gaps = 51/642 (7%)

Query: 585  HHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYE 643
            ++ CP C R F  E+E ++ + +   +  +    ++ ++ E     +    L  +R + E
Sbjct: 633  NNCCPLCSRGFDNEDEVNDLISQLTTQVMNVPAKLEKVTEELQRTSAKKDNLLSMRSLNE 692

Query: 644  EYVKLSKETIPVAEKNLHELTEELDQKSQAFDDV----------LGVLAQIKADKESVEV 693
              V L ++ IP  EK L E  + +   +++ DD+          +  L QI+ D      
Sbjct: 693  RIVVLKEKDIPDLEKRLVEADKVIASLTESVDDLTMLSKEPEQKMSTLRQIQGD------ 746

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNEL 753
               P+   D+   EI+  +K   DLE +            E  + L  +   + +L+ ++
Sbjct: 747  --MPL--LDKFTNEIRSSKK---DLESVKAKCADF-----ECDISLDTATVKQTDLRQKI 794

Query: 754  EKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEK 813
              L+ + +  +  L+    +     EEK K    L +++K  +EL +L E   Q++ +++
Sbjct: 795  GILKTKIKSNQTKLNEHTKKIQKQAEEKNKLKEELLNIQKMVQELYNLQETLKQMESNKE 854

Query: 814  LLAEASGPLSKEKEKLLSDY-------NDLKVKLNREYEEQAEQKINFQQEIEMLLKIAS 866
              +     L    EKL  +        N+   K   E +E +          + +  I S
Sbjct: 855  KYSTELKELENSTEKLEMELKEKEKAKNNAVTKNRHEIQEASTYLTRVSNAFDKIKAIDS 914

Query: 867  KIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIE 926
            +IK++ D    +   +++E   +     K      D +  ++D  KD +  Q+  +R +E
Sbjct: 915  EIKQHKDRNIQKEMDQIKEANDRLNCRHKQIINDRDTLTKKIDSLKDEIAKQEIYKRTLE 974

Query: 927  DNLNYRETKAKVDKFASEIESLEERVLKIG----GVST-FETELGKHLLERDRLLSEVNR 981
            DN+  R       K  +EIES  + +L+I     GV+T   +E    ++++ ++  E  +
Sbjct: 975  DNIKLR-------KAETEIESCNKELLEINDKLKGVNTDMISEKEPLIMKQTKIFREKAQ 1027

Query: 982  CQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALM 1041
             +G +   +    +N+++LK+AQ ++++K++ ++L +L  T+  + D+  Y  ALDK LM
Sbjct: 1028 TEGQLEELKKVYKQNQLELKKAQNQEVEKKYKEKLYELHVTKAIDADIRDYSIALDKCLM 1087

Query: 1042 RFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG---TRSYSYKVLMQTGDAEL 1098
             FH  KME IN IIRELW++ YRG DIDYI I ++   +     R Y Y+V+      E+
Sbjct: 1088 EFHKEKMENINLIIRELWRKIYRGNDIDYIEIKTEGSMSAESERRKYDYRVVQCKNGVEI 1147

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLA LIIRLALAETF    GILALDEPTTNLD  N  SL +AL  I+++
Sbjct: 1148 DMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENVVSLCSALGDIVQE 1207

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            R  Q NF  I+ITHD  F   +G       YY V++++   S
Sbjct: 1208 RMSQRNFMFIIITHDREFIDTLGNIDKVTHYYEVSRNEEGKS 1249



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 32/228 (14%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           ++ ++S L +++  +G+   +S RCAD+D  +   +GVSKAIL +VIF HQ++++WPL +
Sbjct: 112 FQTLDSFL-SVDDGSGKTKDISSRCADLDFVMHEELGVSKAILNSVIFCHQEDSSWPLDE 170

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLE----------------- 105
              +K++FD+IF A +Y+   + ++K+ K+   EIK+   ++                  
Sbjct: 171 GKKVKERFDEIFDADKYSDCFDRLRKIRKEYEHEIKSLGQQVSYWTEKKEDLDKKKLDLV 230

Query: 106 NLQT-LKDAAYKLRE------SISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKD 158
           N +T + +A  K+ E       IS+     E L+  +   E + + I +++ H + ++K+
Sbjct: 231 NTKTRMSEAEEKILELSTELRPISEKLNAIETLQKNLVSFESAREKIKNRLEHQQDSVKE 290

Query: 159 LRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTDEEL-KNWKNNF 205
           L K  D++   T       E+  ++Y      IE    EL K++K NF
Sbjct: 291 LMKSIDKLYEGTT------EELHERYTNYGATIEAKHTELDKSYKQNF 332


>gi|71755961|ref|XP_828895.1| RAD50 DNA repair-like protein [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70834281|gb|EAN79783.1| RAD50 DNA repair-like protein [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
          Length = 1349

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 250/426 (58%), Gaps = 39/426 (9%)

Query: 809  DLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLK--IAS 866
            D  EKL+A+     +KE E L +   +L++   + Y  Q ++ +     +   L+  I S
Sbjct: 933  DQREKLVAQLE-SYNKELEALHAKRKELELASQQGYIGQLKRTLGLLSAVLPRLRDYITS 991

Query: 867  KIKEYYDLRKDERFKELQEKKSQSESE-VKSCKIRTDEILVELDRFKDIVRNQDQIRRNI 925
            ++ E  +L +D     + EK+  +++E VK  ++  D+ L        I+  + ++R  +
Sbjct: 992  RVGE--ELSRDRESLCVNEKRRDTQAEEVKLLRLSIDDTL-------RIINEEQRLRVEV 1042

Query: 926  EDNLNYRETKAKVD---KFASEIE-SLEERVLKIGGVSTFETELGKHLLERDRL------ 975
            +  + Y E K  ++   K  S++  +L E  LK+  V   E  LGK ++ER+ +      
Sbjct: 1043 DKYIEYLEKKGSIEEDEKRLSDVRCTLSE--LKVNAVPAAEAVLGKDVVERESVGRIREL 1100

Query: 976  ------LSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
                    E  R Q  G     + +I   K  L + +YKDI+KR+    ++++TTE+A  
Sbjct: 1101 IRGKISALECLRAQQDGVAEAMRQDIESLKGQLTRDKYKDIEKRYRTTFLKVQTTEIAVS 1160

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RS 1084
            D+++YY AL+KA+  +H  K+ +IN+I+ +LW+ TY+G DID I + S+ +   T   RS
Sbjct: 1161 DVEKYYRALEKAVQTYHQEKIAQINQILADLWRHTYKGSDIDTIELRSEDDVTSTTARRS 1220

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            YSY+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL+E FC +CGILALDEPTTNLD  N
Sbjct: 1221 YSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDN 1280

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHSIIE 1203
            A SLA +L  +++  +  ++FQLIVITHDE F + +G  Q  + +Y + KD +   S+IE
Sbjct: 1281 ARSLAESLRMLIDSHRAVKHFQLIVITHDEHFVRALGG-QALDTFYYIHKDREGAFSVIE 1339

Query: 1204 AQEIFD 1209
             +  FD
Sbjct: 1340 -ERTFD 1344



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 98/158 (62%), Gaps = 7/158 (4%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +  +++++   +  TG+ +  +YR  D+DR +P ++GVS A+LE+VIF HQ++ NWPL  
Sbjct: 113 FATLDNIVAFQDSATGKIISSTYRANDVDRAIPDMLGVSPAVLEHVIFCHQEDGNWPLSP 172

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR---- 118
           P  +KK FDDIF+ATRY  AL+ +++ +K+  ++ K ++  L +L   ++ A ++     
Sbjct: 173 PKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEHREQARQISADIT 232

Query: 119 ---ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTE 153
              E+++  + KT+AL  Q+QEL+     +D+  H  E
Sbjct: 233 VKEETVAGIKAKTDALAPQLQELQAIATALDNVEHRAE 270


>gi|241952833|ref|XP_002419138.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis
            CD36]
 gi|223642478|emb|CAX42727.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis
            CD36]
          Length = 1307

 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 237/814 (29%), Positives = 391/814 (48%), Gaps = 113/814 (13%)

Query: 437  KKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSR 496
            KKAEL        KI     +   +VL  +L +D      + ++L  L  +  +L  KS 
Sbjct: 548  KKAEL-------SKIFANIDNNYFEVLGSKLDVD------VGESL--LSQKISNLEIKSE 592

Query: 497  EADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIE---SKLESLNQQIFSIDTYQKVLDS 553
            E  K+V  L+ ++Q        ++  +DS  + IE   SK++SL   I  + +  ++ D 
Sbjct: 593  EQQKKVVTLESELQ-------INKNSIDSILKTIEENNSKIDSLKVSITKVISEDEINDY 645

Query: 554  AKEKRDVQKSKYNI------ADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFV--- 604
                 D++ S  N+      A+  R   +     A  +  C  C+R F       F+   
Sbjct: 646  ENVVNDLEDSYRNVSEDVNSAEVTRDFKNSAISFAEENKCCLLCKRLFEQGGLGAFIQDL 705

Query: 605  ------------KKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKET 652
                        ++Q ++     E +K ++LE  N       +       +E V  S + 
Sbjct: 706  KQSVDEHKIQEIREQSLEIKKELEDVKSINLEVVNYRECLANVQNYECTLKELVDKSNQI 765

Query: 653  IPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQ 712
                EK L +  +  DQ++            IK   ++   L +P+  A R+  E     
Sbjct: 766  ----EKELEQ--QRKDQQA------------IKHSIDNASSLKKPLSDATRINLE----- 802

Query: 713  KQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQI 772
              V D+E+ LD   + +R          GS+ + D LQ + +++  + +    +L++   
Sbjct: 803  --VSDIEFQLDELNEDLRG-------FGGSVVSVDELQRQQQEINMKIKKTRQNLNDYTE 853

Query: 773  RWHTLREEKVKAANTLRDVKKAEEELEHLMEE----KGQLDLDEKLLAEASGPLSKEKEK 828
              +  + E  K  N ++D K     LE  + E    K  +   E ++ ++   L K K  
Sbjct: 854  SKYKAQRELQKLENRVKDTKLQISNLERSLAEVTGIKNNISEAEDIVRDSEEKLKKIKSS 913

Query: 829  LLSDYNDLKVKLN---------REYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDER 879
            L + + D ++KL+         R+ E++ ++K+    E+       +    Y+D    E+
Sbjct: 914  LDALHVDKQMKLDALKDTQNSIRDVEQEMQRKVESSHELLTSFTSLNDAVTYFDTNIAEK 973

Query: 880  FKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVD 939
            ++    +  +   +  S + + DE   E+   +  V +  +I  NI  N++YR       
Sbjct: 974  YEANALEMKELSQQCASLETKIDEYAQEIKLLEKEVMDASRIEHNILANIDYR------- 1026

Query: 940  KFASEIESLEERVLKIGGVSTFETELGKHLLE------RDRLLSEVNRCQGTMS-VYQT- 991
               S++  LEE  L++G +   + +  K   +      RD L S      G +  V Q  
Sbjct: 1027 ---SQLSRLEETELQLGSMDIEDAQSRKEEYQVESKKLRDALSSLTAEHAGKIGEVKQIK 1083

Query: 992  -NISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEE 1050
              IS  K +L + +YK++++ + ++ I+L+T  + + D+  Y  ALD  +M++H+MKMEE
Sbjct: 1084 DQISSLKKEL-ETEYKNVNQSYHEEWIKLQTNLLVSNDIQIYSKALDNGIMKYHSMKMEE 1142

Query: 1051 INKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQ 1108
            IN+I+ ELW QTY+G DI  I I SD   +  G RSY+Y+V+M    +EL+MRGRCSAGQ
Sbjct: 1143 INRILNELWSQTYKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQ 1202

Query: 1109 KVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLI 1168
            KVLAS++IRLALAE F  NCG++ALDEPTTNLD  NAE+LAAAL+RI+E RK Q NFQLI
Sbjct: 1203 KVLASILIRLALAECFGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLI 1262

Query: 1169 VITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            VITHDE+F   I   +  + +YR+ +D+   S I
Sbjct: 1263 VITHDEKFLTHIQGDRFTDHFYRIQRDESSKSRI 1296


>gi|261334825|emb|CBH17819.1| RAD50 DNA repair-like protein, putative [Trypanosoma brucei gambiense
            DAL972]
          Length = 1349

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/369 (38%), Positives = 224/369 (60%), Gaps = 36/369 (9%)

Query: 864  IASKIKEYYDLRKDERFKELQEKKSQSESE-VKSCKIRTDEILVELDRFKDIVRNQDQIR 922
            I S++ E  +L +D     + EK+  +++E VK  ++  D+ L        I+  + ++R
Sbjct: 989  ITSRVGE--ELSRDRESLRVNEKRRDTQAEEVKLLRLSIDDTL-------RIINEEQRLR 1039

Query: 923  RNIEDNLNYRETKAKVD---KFASEIE-SLEERVLKIGGVSTFETELGKHLLERDRLLS- 977
              ++  + Y E K  ++   K  S++  +L E  LK+  V   E  LGK ++ER+ +   
Sbjct: 1040 VEVDKYIEYLEKKGSIEEDEKRLSDVRCTLSE--LKVNAVPAAEAVLGKDVVERESVGRI 1097

Query: 978  -----------EVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
                       E  R Q  G     + +I   K  L + +YKDI+KR+    ++++TTE+
Sbjct: 1098 RELIRGKISALECLRAQQDGVAEAMRQDIESLKGQLTRDKYKDIEKRYRTTFLKVQTTEI 1157

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-- 1082
            A  D+++YY AL+KA+  +H  K+ +IN+I+ +LW+ TY+G DID I + S+ +   T  
Sbjct: 1158 AVSDVEKYYRALEKAVQTYHQEKIAQINQILADLWRHTYKGSDIDTIELRSEDDVTSTTA 1217

Query: 1083 -RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD 1141
             RSYSY+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL+E FC +CGILALDEPTTNLD
Sbjct: 1218 RRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLD 1277

Query: 1142 GPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHS 1200
              NA SLA +L  +++  +  ++FQLIVITHDE F + +G  Q  + +Y + KD +   S
Sbjct: 1278 EDNARSLAESLRMLIDSHRAVKHFQLIVITHDEHFVRALGG-QALDTFYYIHKDREGAFS 1336

Query: 1201 IIEAQEIFD 1209
            +IE +  FD
Sbjct: 1337 VIE-ERTFD 1344



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 98/158 (62%), Gaps = 7/158 (4%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +  +++++   +  TG+ +  +YR  D+DR +P ++GVS A+LE+VIF HQ++ NWPL  
Sbjct: 113 FATLDNIVAFQDSATGKIISSTYRANDVDRAIPDMLGVSPAVLEHVIFCHQEDGNWPLSP 172

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR---- 118
           P  +KK FDDIF+ATRY  AL+ +++ +K+  ++ K ++  L +L   ++ A ++     
Sbjct: 173 PKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEHREQARQISADIT 232

Query: 119 ---ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTE 153
              E+++  + KT+AL  Q+QEL+     +D+  H  E
Sbjct: 233 VKEETVAGIKAKTDALAPQLQELQAIATALDNVEHRAE 270


>gi|363747924|ref|XP_003644180.1| hypothetical protein Ecym_1108 [Eremothecium cymbalariae DBVPG#7215]
 gi|356887812|gb|AET37363.1| hypothetical protein Ecym_1108 [Eremothecium cymbalariae DBVPG#7215]
          Length = 1298

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/265 (45%), Positives = 167/265 (63%), Gaps = 26/265 (9%)

Query: 963  TELGKHLL---------ERDRLLSEVNRCQ--------------GTMSVYQTNISRNKID 999
             ++G+H+L         ERDR   E  R +              G +   Q  IS     
Sbjct: 1025 AQIGEHILNLDSQNAEAERDRYQQESTRLRFMFEKLSSENAGKLGEIKQLQNQISSLTKQ 1084

Query: 1000 LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
            L Q +YKD+D  + ++  +L+T  +   D+D Y   LD A+M++H +KME+IN+II ELW
Sbjct: 1085 L-QTEYKDVDINYQNEWARLQTKTLVADDIDTYSKVLDSAIMKYHRLKMEDINRIIDELW 1143

Query: 1060 QQTYRGQDIDYIRIHSD--SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIR 1117
            ++TY G D+D I+I SD  S     +SY+Y+V+M   DAEL+MRGRCSAGQKVLAS+IIR
Sbjct: 1144 KRTYSGTDVDTIKIKSDELSNNNKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIR 1203

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            LAL+ETF +NCG++ALDEPTTNLD  N  SLA +L  I+E R+ Q+NFQLIVITHDE+F 
Sbjct: 1204 LALSETFGINCGVIALDEPTTNLDEDNIASLARSLSNILEVRRHQKNFQLIVITHDEKFL 1263

Query: 1178 QLIGQRQHAEKYYRVAKDDHQHSII 1202
              +      + +++V +DD Q S I
Sbjct: 1264 SHMNAVNFTDHFWKVKRDDRQKSEI 1288


>gi|66362212|ref|XP_628070.1| RAD50 [Cryptosporidium parvum Iowa II]
 gi|46227665|gb|EAK88600.1| RAD50 [Cryptosporidium parvum Iowa II]
          Length = 1062

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 148/211 (70%), Gaps = 15/211 (7%)

Query: 1007 DIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQ 1066
            ++ +++   + + +T  +  KDL++Y+ +L KALM+FH  KM EIN+ I+ELW  TY+G 
Sbjct: 847  ELSEKYLSGVFEQQTMSLCVKDLEKYHKSLQKALMKFHIDKMTEINRTIKELWNITYKGH 906

Query: 1067 DIDYIRIHSDSE---------------GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVL 1111
            DIDYI I SD+E                +GT+S++Y+V+M     EL+M+GRCSAGQ+VL
Sbjct: 907  DIDYIAIRSDAEDNEENFTVEKKSSRTPSGTKSFNYRVVMIQNGVELDMKGRCSAGQRVL 966

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVIT 1171
            A +IIRLALAE+FC+NCGILALDEPTTNLD  N + LA AL  +++ RK Q+NFQLI+IT
Sbjct: 967  ACIIIRLALAESFCVNCGILALDEPTTNLDRFNIKGLAEALSYLIKFRKQQKNFQLIIIT 1026

Query: 1172 HDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            HDE F +++ Q Q  + ++ V+KD+  +S I
Sbjct: 1027 HDENFVRVMAQAQQCDHFFHVSKDEQGYSTI 1057



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 82/107 (76%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           +++ +ESVLQT +  +G+   +S++CAD++ +VP L GVS +I+ENV+F HQ+++NWPLQ
Sbjct: 132 QFRVLESVLQTKDEESGQVTSISHKCADINAQVPILFGVSNSIIENVLFCHQEDSNWPLQ 191

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ 108
           D + +KKKFD++F +TRY+KALE+I KL  +  ++IK   L  ENL+
Sbjct: 192 DMAKVKKKFDELFGSTRYSKALELITKLKGEYNKKIKEKALFNENLK 238


>gi|397569691|gb|EJK46906.1| hypothetical protein THAOC_34410 [Thalassiosira oceanica]
          Length = 1372

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 105/195 (53%), Positives = 141/195 (72%), Gaps = 9/195 (4%)

Query: 1011 RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1070
            RH  ++I+  TT     DLDRYY ALDKAL+R+H +K+ +INKIIRELW  TY+G+DI  
Sbjct: 1160 RHRIKMIEHYTTATVCDDLDRYYEALDKALLRYHGIKIADINKIIRELWALTYKGEDITN 1219

Query: 1071 IRIHS--DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
            I I S  DS     RSY+Y+++M  G+++++MRGRCSAGQ+VLAS++IRLALAETFCLNC
Sbjct: 1220 IEIQSGQDSSSRANRSYNYRIVMSKGNSQMDMRGRCSAGQRVLASIVIRLALAETFCLNC 1279

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR----- 1183
            G++ALDEPTTNLD  N   LA AL +I+  R  Q NFQL+VITHDE F  ++ Q      
Sbjct: 1280 GVMALDEPTTNLDFENKRGLAIALAQIIASRASQSNFQLVVITHDEDFVSMMKQELSSLT 1339

Query: 1184 --QHAEKYYRVAKDD 1196
                 E+Y++V++++
Sbjct: 1340 GFSMPERYFQVSREE 1354


>gi|154340261|ref|XP_001566087.1| RAD50 DNA repair-like protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|134063406|emb|CAM39585.1| RAD50 DNA repair-like protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1361

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 111/208 (53%), Positives = 161/208 (77%), Gaps = 5/208 (2%)

Query: 992  NISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEI 1051
            ++S+ K  L+  +Y++I+KR+    ++++TTE++ +D+++YY+AL+KA+  +H  K+ +I
Sbjct: 1137 DVSQLKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKITQI 1196

Query: 1052 NKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQTGDAELEMRGRCSAG 1107
            N+II ELW+QTYRG DID + I S++EG  T    RSY+Y+V+M+ G+ E++MRGRCSAG
Sbjct: 1197 NQIIAELWRQTYRGSDIDTVEIRSETEGTTTTAARRSYNYRVVMKRGNNEMDMRGRCSAG 1256

Query: 1108 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQL 1167
            QKVLAS+IIRLAL+E FC +CGILALDEPTTNLD  NA SLA AL  ++E R+  ++FQL
Sbjct: 1257 QKVLASIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIEVRRAVKHFQL 1316

Query: 1168 IVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +VITHDE+F + +G  Q  EK+Y V KD
Sbjct: 1317 VVITHDEQFVRALGG-QSLEKFYYVHKD 1343


>gi|71400066|ref|XP_802939.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener]
 gi|70865366|gb|EAN81493.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
          Length = 631

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 170/244 (69%), Gaps = 11/244 (4%)

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
            LER R   E     G +     +I+  +  L + +Y DI+KR+    ++++TTE+A  D+
Sbjct: 390  LERSRAQQE-----GNVEAMMQDIANLRSQLAREKYHDIEKRYRSTFLKVQTTEIAVADI 444

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RSYS 1086
            ++YY AL+KA+  +H  K+ +IN+I+ +LW+QTY+G DID + + S+ +   T   RSYS
Sbjct: 445  EKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGSDIDTVELRSEDDVTSTTARRSYS 504

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL+E FC +CGILALDEPTTNLD  NA 
Sbjct: 505  YRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNAR 564

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHSIIEAQ 1205
            SLA +L  ++E+ +  ++FQLIVITHDE+F + +G  Q  + +Y + KD D   S+IE +
Sbjct: 565  SLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGG-QALDTFYYIHKDRDGAFSVIE-E 622

Query: 1206 EIFD 1209
              FD
Sbjct: 623  RTFD 626


>gi|312377979|gb|EFR24674.1| hypothetical protein AND_10571 [Anopheles darlingi]
          Length = 889

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 226/851 (26%), Positives = 425/851 (49%), Gaps = 65/851 (7%)

Query: 391  LAEREFE-----INIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHK 445
            + E+E+E      N+   ++EL A  + IK L  + D L     +  K A+K+ EL   +
Sbjct: 70   MLEQEYEHHASTTNLPALRAELAAKKRVIKELQEQSDNLEERIHEMDKFAMKEKELTMKE 129

Query: 446  KKH-------KKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREA 498
            +++       +++  ++ D +R +   R  +D + K+ +     +L  E + ++ K R +
Sbjct: 130  QQYNSRESEVRRLKSKHADSLRRLFPER-TIDSNYKRNLQDLYDSLQPEINGVNEKLRRS 188

Query: 499  D---KEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSIDTYQKVLDSAK 555
            +    E+  L+   ++  D L++ + D        E K+ S  + +     Y +V+   K
Sbjct: 189  EGVITEMETLRKTQKQQLDRLTREKADA-------EEKMYSACRGM----PYDEVVARLK 237

Query: 556  EKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSA 615
            EK D    ++  A     +F  +     + H CP C++  ++++  +   K   +     
Sbjct: 238  EKIDKNTLEHGEARSAVVLFQKYISNINSAHCCPVCDKEMTSDDALDVSGKLSDEIRRLP 297

Query: 616  EHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFD 675
            + ++ L     +    + +L  L+ V E   K  K+ +P  ++ L E    L Q S+  +
Sbjct: 298  QKIETLEKGLKSDRLEYDKLLALKSVAEMLDK-QKQELPKVKQQLQETERRLAQASEEVE 356

Query: 676  DVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEI 735
            ++   L++  ++ + +  +V  +   D   +E++  ++ V+ L+  L+++     + E +
Sbjct: 357  ELQIALSEPTSNVQLINTIVGDMSILDENNRELERMKRGVEQLKEELNAKIPPGVSSEAL 416

Query: 736  ---------QLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN 786
                     QL+L   LS  D LQ  L+   D+       L+N+Q R + ++ +K+K   
Sbjct: 417  KVQRESLREQLKLERRLS--DELQGNLDSKADK-------LNNLQSRNNEMKAKKLKLQE 467

Query: 787  TLRDVKKAEEELEHLMEEKGQLDLDEKLLAEASG---PLSKEKEKLLSDYNDLKVKLNRE 843
            +++ + +  E++  L ++   L+ D   LAE      P+ +E ++ +++    K + +++
Sbjct: 468  SVQSLGQKREKVLELTDKICSLETD---LAETQCRLEPMKRELDQKVAEKLSAKQQSSQQ 524

Query: 844  YEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDE 903
             ++  +      Q+   + ++ S++ +   L      + LQ+K  Q++S+ +  +   ++
Sbjct: 525  LQKARKTLEGLNQKESEIDRLCSELDKLASLNLSSELQRLQDKIDQAKSDRERAQCIVEQ 584

Query: 904  ILVELDRFK-DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE 962
                ++R K DI  +  Q  R++ DN + +    +     +E+++L + + +I   S   
Sbjct: 585  HTENIERIKQDIAEHHIQ-ERDLLDNRDLKMLMRESTNLQAELDALMKSMGEID-YSGLN 642

Query: 963  TELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTT 1022
             E  + +  RD L  + +  +G +   +  I   +  L+QA+YKD  + +     +    
Sbjct: 643  AERTRLIDLRDGLQVKQSELKGQIQELKLQIQSLQEVLEQAKYKDATRNYMKTFCESVAL 702

Query: 1023 EMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT 1082
                 DL +Y +AL++AL  +HT KME IN+ I  LW+  YRG DIDYIRI ++ +G GT
Sbjct: 703  RKIISDLKKYRDALERALREYHTEKMEVINRTILSLWRAIYRGNDIDYIRIRTEDDGNGT 762

Query: 1083 ------RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
                  R YSY V+    D E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG++ALDEP
Sbjct: 763  ERSDRRRLYSYGVVQAKNDVEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVMALDEP 822

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESL  +L RI+ +R+   NF LIVITHDE F   + + +  E YYR++++ 
Sbjct: 823  TTNLDRENIESLCESLRRIVSERENA-NFLLIVITHDEEF---VTKLEKFETYYRISRNR 878

Query: 1197 HQHSIIEAQEI 1207
               S+I  + +
Sbjct: 879  EGKSVIREERV 889


>gi|157871564|ref|XP_001684331.1| RAD50 DNA repair-like protein [Leishmania major strain Friedlin]
 gi|68127400|emb|CAJ05024.1| RAD50 DNA repair-like protein [Leishmania major strain Friedlin]
          Length = 1360

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/216 (50%), Positives = 161/216 (74%), Gaps = 5/216 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G       ++++ K  L+  +Y++I+KR+    ++++TTE++ +D+++YY+AL+KA+  +
Sbjct: 1128 GNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSY 1187

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA----GTRSYSYKVLMQTGDAELE 1099
            H  K+ +IN+II ELW++TYRG DID + I S++EG       RSY+Y+V+M+ G+ E++
Sbjct: 1188 HQEKIAQINQIIAELWRRTYRGSDIDTVEIRSETEGTTTTTARRSYNYRVVMKRGNNEMD 1247

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLA +IIRLAL+E FC +CGILALDEPTTNLDG NA SLA AL  +++ R
Sbjct: 1248 MRGRCSAGQKVLACIIIRLALSEAFCCDCGILALDEPTTNLDGDNARSLADALRTLIQAR 1307

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +  ++FQL+VITHDE+F + +G  Q  EK+Y V KD
Sbjct: 1308 RAVKHFQLVVITHDEQFVRALGG-QSLEKFYYVHKD 1342



 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 85/129 (65%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TGE +  +YR +D+DR VP ++GVS A+LE+VIF HQ+E NWPL  P  +K+ FDDIF+A
Sbjct: 127 TGEVISSTYRSSDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIFDDIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ ++   K+  +++K ++  L  L+  ++ A +L + I++ +   +A++ +  
Sbjct: 187 TRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAEKESVVKAIQGRSI 246

Query: 137 ELEKSIQDI 145
            +E  ++ +
Sbjct: 247 GIEPELRGL 255


>gi|146091672|ref|XP_001470089.1| RAD50 DNA repair-like protein [Leishmania infantum JPCM5]
 gi|134084883|emb|CAM69281.1| RAD50 DNA repair-like protein [Leishmania infantum JPCM5]
          Length = 1360

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 161/216 (74%), Gaps = 5/216 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G       ++++ K  L+  +Y++I+KR+    ++++TTE++ +D+++YY+AL+KA+  +
Sbjct: 1128 GNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSY 1187

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA----GTRSYSYKVLMQTGDAELE 1099
            H  K+ +IN+II ELW+QTYRG DID + I S++EG       RSY+Y+V+M+ G+ E++
Sbjct: 1188 HQEKIAQINQIIAELWRQTYRGSDIDTVEIRSETEGTTTTTARRSYNYRVVMKRGNNEMD 1247

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLAS+IIRLAL+E FC +CGILALDEPTTNLD  NA SLA AL  +++ R
Sbjct: 1248 MRGRCSAGQKVLASIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQAR 1307

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +  ++FQL+VITHDE+F + +G  Q  EK+Y V KD
Sbjct: 1308 RAVKHFQLVVITHDEQFVRALGG-QSLEKFYYVHKD 1342



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 98/153 (64%), Gaps = 7/153 (4%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TGE +  +YR +D+DR VP ++GVS A+LE+VIF HQ+E+NWPL  P  +K+ FDDIF+A
Sbjct: 127 TGEVISSTYRSSDVDRVVPEMLGVSPAVLEHVIFCHQEESNWPLGPPKDVKRIFDDIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ ++   K+  +++K ++  L  L+  ++ A +L + I+Q +   +A++    
Sbjct: 187 TRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKAIQG--- 243

Query: 137 ELEKSIQDIDDKIHHTELTLKDLRKMQDQISTM 169
              +SI  I+ ++       ++LR +++QI T+
Sbjct: 244 ---RSI-GIEPELRGLRQAREELRTVEEQIETL 272


>gi|398017937|ref|XP_003862155.1| RAD50 DNA repair-like protein [Leishmania donovani]
 gi|322500384|emb|CBZ35461.1| RAD50 DNA repair-like protein [Leishmania donovani]
          Length = 1360

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 161/216 (74%), Gaps = 5/216 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G       ++++ K  L+  +Y++I+KR+    ++++TTE++ +D+++YY+AL+KA+  +
Sbjct: 1128 GNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSY 1187

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA----GTRSYSYKVLMQTGDAELE 1099
            H  K+ +IN+II ELW+QTYRG DID + I S++EG       RSY+Y+V+M+ G+ E++
Sbjct: 1188 HQEKIAQINQIIAELWRQTYRGSDIDTVEIRSETEGTTTTTARRSYNYRVVMKRGNNEMD 1247

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLAS+IIRLAL+E FC +CGILALDEPTTNLD  NA SLA AL  +++ R
Sbjct: 1248 MRGRCSAGQKVLASIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQAR 1307

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +  ++FQL+VITHDE+F + +G  Q  EK+Y V KD
Sbjct: 1308 RAVKHFQLVVITHDEQFVRALGG-QSLEKFYYVHKD 1342



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 97/153 (63%), Gaps = 7/153 (4%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TGE +  +YR +D+DR VP ++GVS A+LE+VIF HQ+E NWPL  P  +K+ FDDIF+A
Sbjct: 127 TGEVISSTYRSSDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIFDDIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ ++   K+  +++K ++  L  L+  ++ A +L + I+Q +   +A++    
Sbjct: 187 TRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKAIQG--- 243

Query: 137 ELEKSIQDIDDKIHHTELTLKDLRKMQDQISTM 169
              +SI  I+ ++       ++LR +++QI T+
Sbjct: 244 ---RSI-GIEPELRGLRQAREELRTVEEQIETL 272


>gi|323455276|gb|EGB11145.1| hypothetical protein AURANDRAFT_5421, partial [Aureococcus
            anophagefferens]
          Length = 229

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/219 (54%), Positives = 150/219 (68%), Gaps = 13/219 (5%)

Query: 970  LERD--RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK 1027
            L RD  RL+S      G  S   +    +  DLK A+YK ++++H   LI  +TTEMA K
Sbjct: 8    LARDLNRLVSRRGEYVGRRSSEASVAKEHAGDLKGARYKGVEEKHRKALINKETTEMAAK 67

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----R 1083
            DL+ Y+ ALDKAL  +H++K+EEIN+I+RELWQ TY G+DID I I S  E AG+    R
Sbjct: 68   DLEHYWGALDKALSNYHSLKIEEINRIVRELWQITYMGEDIDSIEIVS-GEDAGSNRAAR 126

Query: 1084 SYSYKVLMQTG------DAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPT 1137
            SY+Y V M+         A L+M+GRCSAGQ+VLAS++IRLALA+TFC+ CGILALDEPT
Sbjct: 127  SYNYHVQMRKAQGRKRAGAALDMKGRCSAGQRVLASIVIRLALAQTFCIKCGILALDEPT 186

Query: 1138 TNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERF 1176
            TNLD  N  SLA  L RI+ +R  Q NFQL+VITHDE F
Sbjct: 187  TNLDEANRRSLAHGLSRIIAERAAQHNFQLVVITHDEEF 225


>gi|401424802|ref|XP_003876886.1| RAD50 DNA repair-like protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
 gi|322493130|emb|CBZ28415.1| RAD50 DNA repair-like protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 1360

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 162/216 (75%), Gaps = 5/216 (2%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G       ++++ K  L+  +Y++I+KR+    ++++TTE++ +D+++YY+AL+KA+  +
Sbjct: 1128 GNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSY 1187

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLMQTGDAELE 1099
            H  K+ +IN+II ELW+QTYRG D+D + I S++EG  T    RSY+Y+V+M+ G+ E++
Sbjct: 1188 HQEKIAQINQIIAELWRQTYRGSDVDTVEIRSETEGTTTTAARRSYNYRVVMKRGNNEMD 1247

Query: 1100 MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDR 1159
            MRGRCSAGQKVLAS+IIRLAL+E FC +CGILALDEPTTNLD  NA SLA AL  +++ R
Sbjct: 1248 MRGRCSAGQKVLASIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQAR 1307

Query: 1160 KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +  ++FQL+VITHDE+F + +G  Q  EK+Y V KD
Sbjct: 1308 RAVKHFQLVVITHDEQFVRALGG-QSLEKFYYVLKD 1342



 Score =  108 bits (269), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 97/153 (63%), Gaps = 7/153 (4%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TGE V  +YR +D+DR VP ++GVS A+LE+VIF HQ+E NWPL  P  +K+ FDDIF+A
Sbjct: 127 TGEVVSSTYRASDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIFDDIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ ++   K+  +++K ++  L  L+  ++ A +L + I+Q +   +A+++   
Sbjct: 187 TRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKAIQD--- 243

Query: 137 ELEKSIQDIDDKIHHTELTLKDLRKMQDQISTM 169
              +SI  I+ ++       + LR +++QI T+
Sbjct: 244 ---RSI-GIEPELRGLRQAREALRTVEEQIETL 272


>gi|407420252|gb|EKF38521.1| DNA repair protein RAD50, putative [Trypanosoma cruzi marinkellei]
          Length = 1348

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 170/244 (69%), Gaps = 11/244 (4%)

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
            LER R   E     G +     +I+  +  L + +Y DI+KR+    ++++TTE+A  D+
Sbjct: 1107 LERSRAQQE-----GNVEAMMQDITNLRSQLAREKYHDIEKRYRSTFLKVQTTEIAVADI 1161

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RSYS 1086
            ++YY AL+KA+  +H  K+ +IN+I+ +LW+QTY+G DID + + S+ +   T   RSYS
Sbjct: 1162 EKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGSDIDTVELRSEDDVTSTTARRSYS 1221

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V+M+ G++E++MRGRCSAGQKVLAS++IRLAL+E FC +CGILALDEPTTNLD  NA 
Sbjct: 1222 YRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNAR 1281

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD-DHQHSIIEAQ 1205
            SLA +L  ++E+ +  ++FQLIVITHDE+F + +G  Q  + +Y + KD +   S+IE +
Sbjct: 1282 SLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGG-QALDTFYYIHKDREGAFSVIE-E 1339

Query: 1206 EIFD 1209
              FD
Sbjct: 1340 RTFD 1343


>gi|320580809|gb|EFW95031.1| DNA repair protein RAD50 [Ogataea parapolymorpha DL-1]
          Length = 732

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 117/237 (49%), Positives = 155/237 (65%), Gaps = 5/237 (2%)

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
            L SE +   G M+     I   K +L Q  YKDID+R+  +   L+T      DL  YY 
Sbjct: 492  LQSEYSTKLGEMTQLSRQIQSVKHEL-QRDYKDIDERYTKEYASLQTKLSMVTDLTTYYK 550

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----SEGAGTRSYSYKVL 1090
            A+D A+M FH +KM+EIN+II ELW++TY G D+D I + +D    S  A  RSY+Y+V+
Sbjct: 551  AIDSAVMEFHQVKMKEINRIIDELWKKTYMGNDVDSIMVRADPIKSSTAATMRSYNYRVV 610

Query: 1091 MQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAA 1150
            M     EL+MRGRCSAGQ+VLA+LIIRLALAE F LN G++ALDEPTTNLD  N ESLA 
Sbjct: 611  MVKNGTELDMRGRCSAGQRVLAALIIRLALAECFGLNFGMIALDEPTTNLDDDNIESLAK 670

Query: 1151 ALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            AL  I+++R  Q NFQLIVITHDE+F + +      + YY+V +++  +S I   +I
Sbjct: 671  ALANIIQERATQRNFQLIVITHDEKFLRAMNAVDFTDHYYKVIRNERLNSTINKVQI 727



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 11  QTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKF 70
           Q +  H GEK  ++ + AD++  VP  +GVS+A+L  VIF HQDE+ WP+ D ++LKK+F
Sbjct: 117 QLVAIHNGEKQTVTSKMADIETAVPQQLGVSRAVLNYVIFCHQDESLWPISDSASLKKRF 176

Query: 71  DDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEA 130
           D+IF + ++ K LE  + + K+   +I+     +E+L+  +  A+     +++   + + 
Sbjct: 177 DEIFDSVKFIKVLETFRAIQKEMNVDIRVINNTVEHLRNDRARAHHKHAQVAELNRQVDR 236

Query: 131 LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEE 190
           L  + + L + I+ ++ +      T +D  K   ++  +  + S+L  QQ     +    
Sbjct: 237 LNAESETLAREIEAVNKEADRLFATNQDYEKTISRLEYLRQQESSL-AQQMDVIRSTTTR 295

Query: 191 IEDTDEELKNWKNNFEGIVAKRESDISKL 219
           ++  D +++   +NF  ++ ++ S + +L
Sbjct: 296 VDLPDAQIREQLDNFANVLVEKRSAVEQL 324


>gi|428173374|gb|EKX42277.1| Rad50/sbcC double strand break DNA repair processing nuclease,
            meiosis and mitosis [Guillardia theta CCMP2712]
          Length = 1224

 Score =  219 bits (558), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 103/196 (52%), Positives = 145/196 (73%), Gaps = 3/196 (1%)

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            +L++++Y+DIDK +  +L++L    +A +DLD+ Y ALD+AL++FHT+KME+IN+ ++E 
Sbjct: 1018 ELRKSEYQDIDKIYALELVKLNAKRIAEQDLDKSYKALDRALVKFHTLKMEQINQSLKEF 1077

Query: 1059 WQQTYRGQDIDYIRIHSD-SEGAGTRSYSYKVLMQTGDA-ELEMRGRCSAGQKVLASLII 1116
            WQ TYRG DI YI I +D  E    R+++Y+++M+  DA EL+MRGRCSAGQKVLASL++
Sbjct: 1078 WQNTYRGDDIAYIEIKTDVDESNNRRTHNYRLVMKCLDAVELDMRGRCSAGQKVLASLVV 1137

Query: 1117 RLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQ-ENFQLIVITHDER 1175
            RLALAETFC NCGILALDEPT+NLD  N E    AL R++ +RK + + FQLIVI+HD  
Sbjct: 1138 RLALAETFCHNCGILALDEPTSNLDAKNIEGFTDALSRLVNERKAESDTFQLIVISHDME 1197

Query: 1176 FAQLIGQRQHAEKYYR 1191
            F + +  +     Y R
Sbjct: 1198 FIENLAFKTGTTHYMR 1213



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 140/254 (55%), Gaps = 16/254 (6%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           +Y+ + S ++ I     E   ++ +C D D  VP +MGV+KA+L++VIF HQ+E+NW L 
Sbjct: 112 QYRKVSSEIE-IKSANKEAESMNRKCGD-DNVVPIMMGVTKALLQHVIFCHQEESNWILG 169

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           D  ++K+KFD IF++T+Y KALE I+K  ++   E+K    ++  L+T +D A + RE++
Sbjct: 170 DSRSIKEKFDAIFASTKYAKALESIRKTQQETKTELKEIHERVNRLRTNRDHAKQQRENL 229

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
              Q+++E  K Q++  EK+ ++ + ++ +   T+ +    + Q+ ++  R  TL     
Sbjct: 230 QNYQQRSEEGKRQIEMHEKNCKNAEQELQNLSNTIDEYADKETQVKSLEGRLETL----- 284

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVA-------KRESDISKLEREKNDMDTKIKFLE 234
           +++ A AE   D  +E     N  E ++A         +     L  E+ND+  K+   +
Sbjct: 285 EKFKAQAE--ADVKQEFTEDVNTLESLLADLKVQDRDCQESFENLVNEENDVKGKLNDCQ 342

Query: 235 QNIDAYTAEITNLL 248
           +NI     + +NL+
Sbjct: 343 ENISRLKNDKSNLI 356


>gi|157109203|ref|XP_001650568.1| DNA repair protein rad50 [Aedes aegypti]
 gi|108879084|gb|EAT43309.1| AAEL005245-PA [Aedes aegypti]
          Length = 1034

 Score =  219 bits (558), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 228/863 (26%), Positives = 425/863 (49%), Gaps = 94/863 (10%)

Query: 384  VERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELEN 443
            VE    QLAE++  I   + Q++L  ++++I AL    D +A  +    +L LK+ +   
Sbjct: 227  VEGMRRQLAEKK--IKHEELQAKLDRVEEQISAL----DAVAAKA---TELHLKEQQFNA 277

Query: 444  HKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVN 503
             + + K++ +++ + ++ +   +  +D + K+ +        T +DDL  + ++ ++ + 
Sbjct: 278  KESEFKRLRNKHTENLKRLFPSK-TIDTNYKRNVQ-------TLYDDLQRQIKQLNESMR 329

Query: 504  MLQMKIQEVTDNLSKHRKDVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDV 560
              Q  + E+       ++++D     IE +L    ++I+++   + +++VL   K+K   
Sbjct: 330  KSQATVTEMETTRRSQKRELDR----IERELTENKEKIYTVCQGNPFEEVLAKLKDK--- 382

Query: 561  QKSKYNIADG-MRQ---MFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAE 616
              SK N+  G +R    ++  +         CP C +     +  +   +   +     E
Sbjct: 383  -ISKNNLEHGELRSAEVLYKKYISRIEDDKCCPVCHKGMDGADVQDISSELSDEIRRLPE 441

Query: 617  HMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDD 676
             ++ L          + QL  L+  Y E +    E IP  ++ L E   +L Q S   ++
Sbjct: 442  KIEALERMLKADQKKYDQLLALQ-PYSERIAKQTEEIPKLKEQLEETERKLVQASSDLEE 500

Query: 677  VLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQ 736
                + +  +  + +  ++  +   D   ++I   +K +++L+  +      V+T E   
Sbjct: 501  CQMSILEPNSSVQLINSILGDMSILDESVRDIDRMKKGIENLKIEV-----AVKTPE--- 552

Query: 737  LELSGSLSTKDNLQNELEKLRDEQRY-------MEND-------LSNIQIRWHTLREEKV 782
                G+ ++ D+++ E E LR E R        M+N        L+N+  R++ ++E+K+
Sbjct: 553  ----GTTASLDDIKLEREALRGELRVERISIDAMQNKIDEETERLNNLHQRYNQMKEKKI 608

Query: 783  KAANTLR--DVKKAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKL 840
            +   +++  D KKA+E           L+L EK+ A     + + + KL     +L  + 
Sbjct: 609  QLQESVQSLDQKKAKE-----------LELGEKI-ASCQREMDETENKLGPVKQNLITEE 656

Query: 841  NREYEEQAEQKINF---QQEIEMLLKIASKI----KEYYDLRK---DERFKELQEKKSQS 890
              + + + E + N    Q E+E L ++ ++I    KE   L +    E  ++++ K  +S
Sbjct: 657  KSKAKAKEENRANLNKAQAELEELKRMDAEIVRLCKELDALSRLNLAEEIQKIKRKLQES 716

Query: 891  ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEE 950
              E+K      DE   ++D  K  V NQD I R+  DN +  + K +       +++L +
Sbjct: 717  NEEMKKIIAAIDEKTYQIDSLKKEVMNQDMIERDYLDNRDLMKLKDETTSLKQGLDALMQ 776

Query: 951  RVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDK 1010
             +  +   +  + E  K L +RD + S  ++  G ++  +      K +L ++++K+  K
Sbjct: 777  SIGDMDAPNVAQ-ERNKLLEQRDAIQSTKSQTTGQIAELENQSKALKKELDRSEFKNAVK 835

Query: 1011 RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1070
             +     +    +    D+ +Y NAL+ ALM++H  KME+IN+ I  LW+  YRG DIDY
Sbjct: 836  NYLKTYSESVVLKKMISDILKYRNALEWALMKYHAEKMEQINRSIYSLWRDIYRGNDIDY 895

Query: 1071 IRIHSDSEGAG------TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
            IRI ++ E          R Y Y+V+    D E++MRGRCSAGQKVLASLIIR+ALAETF
Sbjct: 896  IRIKTEDESKPDKVTDKRRQYHYRVVQAKNDVEIDMRGRCSAGQKVLASLIIRMALAETF 955

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ 1184
              NCG++ALDEPTTNLD  N  SL  +L RI+ +R+   NF L++ITHDE F   + + +
Sbjct: 956  SNNCGVMALDEPTTNLDRENIASLCESLRRIVTERENG-NFLLVIITHDEDF---VTKLE 1011

Query: 1185 HAEKYYRVAKDDHQHSIIEAQEI 1207
              + YYRV++D    SII+ +++
Sbjct: 1012 KFDTYYRVSRDHDGKSIIKEEQL 1034


>gi|209881510|ref|XP_002142193.1| hypothetical protein [Cryptosporidium muris RN66]
 gi|209557799|gb|EEA07844.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
          Length = 1092

 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/207 (49%), Positives = 142/207 (68%), Gaps = 15/207 (7%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
            + +L    +   DL++Y  AL KALM+FH  KM+EIN+ I+ELW+ TY+G+DIDYI I S
Sbjct: 883  IFKLNVISIIVDDLEKYQWALQKALMKFHATKMKEINRTIKELWKVTYKGRDIDYIAIRS 942

Query: 1076 DSEG---------------AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLAL 1120
            D +                + T+S++Y+V+M     EL+M+GRCSAGQ+VLA ++IRLAL
Sbjct: 943  DVDNDQEDDAKLSVSSKSVSSTKSFNYRVVMVQKGVELDMKGRCSAGQRVLACILIRLAL 1002

Query: 1121 AETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLI 1180
            AE+FC+NCGILALDEPTTNLD  N E LA AL  +++ RK Q+NFQLI+ITHDE F +++
Sbjct: 1003 AESFCVNCGILALDEPTTNLDRDNIEGLANALSYLIKYRKSQQNFQLILITHDEEFVRIM 1062

Query: 1181 GQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
               QH   +Y++ KDD  +S I   +I
Sbjct: 1063 AHAQHCNHFYKIVKDDDGYSTIRQVDI 1089



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 67/85 (78%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           +++ +ESVLQT +  TGE   +S++C D++ +VP L G+S AI+ENVIF HQ+++NWPLQ
Sbjct: 121 QFRVLESVLQTKDDETGEIASISHKCVDINNQVPKLFGISPAIIENVIFCHQEDSNWPLQ 180

Query: 62  DPSTLKKKFDDIFSATRYTKALEVI 86
           D + +KKKFDD+F ATR++K+L+  
Sbjct: 181 DTAKIKKKFDDLFGATRFSKSLDTF 205


>gi|385302347|gb|EIF46483.1| dna repair protein rad50 [Dekkera bruxellensis AWRI1499]
          Length = 409

 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/224 (49%), Positives = 146/224 (65%), Gaps = 11/224 (4%)

Query: 990  QTNISRNKIDLK---QAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
            +T I R   D++   Q  +KD++KR+  Q   L+T      DL   Y A D  +M+FH  
Sbjct: 177  KTQIERQISDIRTEIQRDFKDVNKRYVKQCAXLQTKLALVTDLGTCYKATDDGVMKFHHE 236

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA----GT----RSYSYKVLMQTGDAEL 1098
            KM EIN+II ELW+ TY G D++ I I +D   +    GT    RSY+Y+V+M     EL
Sbjct: 237  KMAEINRIIDELWKGTYMGNDVESIMIRADPGASKSRXGTLKTRRSYNYRVVMVKNGVEL 296

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMED 1158
            +MRGRCSAGQKVLAS+IIRLALAE F LN G++ LDEPTTNLD  N ESLA AL++I+E 
Sbjct: 297  DMRGRCSAGQKVLASIIIRLALAECFGLNFGMITLDEPTTNLDEENIESLAKALNKIIEM 356

Query: 1159 RKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            R  Q NFQLIVITHDE+F + +   +  + Y++V +D+  HS I
Sbjct: 357  RSVQSNFQLIVITHDEKFLRYMNAVEFTDHYFKVVRDERLHSTI 400


>gi|15292523|gb|AAK93530.1| SD05424p [Drosophila melanogaster]
          Length = 781

 Score =  211 bits (536), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 186/303 (61%), Gaps = 13/303 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETE 964
            EL+  K    NQ  + R+++DN   ++ + K  K     + L++++  L    VS  +  
Sbjct: 470  ELETIKTECSNQQTVERDLKDNRELKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVN 529

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            L K   +RD+         G +    + +++ + ++ + ++K+  K       +++ T +
Sbjct: 530  LTK---QRDKATVRKGELLGQLGEIHSQVNKLQREIDEPRFKESLKNFRKANYEIEVTRL 586

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SEGAG 1081
              +DL +Y  AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+ + 
Sbjct: 587  CIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASA 646

Query: 1082 TR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTN
Sbjct: 647  DRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTN 706

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV +++   
Sbjct: 707  LDRANINSLCEALNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNEECK 763

Query: 1200 SII 1202
            S+I
Sbjct: 764  SVI 766


>gi|386768435|ref|NP_001246461.1| rad50, isoform E [Drosophila melanogaster]
 gi|383302640|gb|AFH08214.1| rad50, isoform E [Drosophila melanogaster]
          Length = 1318

 Score =  210 bits (535), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 186/303 (61%), Gaps = 13/303 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETE 964
            EL+  K    NQ  + R+++DN   ++ + K  K     + L++++  L    VS  +  
Sbjct: 1007 ELETIKTECSNQQTVERDLKDNRELKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVN 1066

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            L K   +RD+         G +    + +++ + ++ + ++K+  K       +++ T +
Sbjct: 1067 LTK---QRDKATVRKGELLGQLGEIHSQVNKLQREIDEPRFKESLKNFRKANYEIEVTRL 1123

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SEGAG 1081
              +DL +Y  AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+ + 
Sbjct: 1124 CIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASA 1183

Query: 1082 TR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTN
Sbjct: 1184 DRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTN 1243

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV +++   
Sbjct: 1244 LDRANINSLCEALNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNEECK 1300

Query: 1200 SII 1202
            S+I
Sbjct: 1301 SVI 1303



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 34/241 (14%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 111 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 170

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 171 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVK 230

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ + Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 231 TLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEIRNVEFEIGKYQAQKVEMDTKHKNCK 290

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +    F             +++ D+E+ N+      +  KR   E D+S+++
Sbjct: 291 DQISTLTLKIKKPFRGT----------LDELDQEISNFDQRMLEMRQKRTEVEGDLSQIK 340

Query: 221 R 221
           R
Sbjct: 341 R 341


>gi|281364022|ref|NP_726199.3| rad50, isoform D [Drosophila melanogaster]
 gi|384872701|sp|Q9W252.4|RAD50_DROME RecName: Full=DNA repair protein RAD50
 gi|272432636|gb|AAF46847.3| rad50, isoform D [Drosophila melanogaster]
          Length = 1318

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 186/303 (61%), Gaps = 13/303 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETE 964
            EL+  K    NQ  + R+++DN   ++ + K  K     + L++++  L    VS  +  
Sbjct: 1007 ELETIKTECSNQQTVERDLKDNRELKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVN 1066

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            L K   +RD+         G +    + +++ + ++ + ++K+  K       +++ T +
Sbjct: 1067 LTK---QRDKATVRKGELLGQLGEIHSQVNKLQREIDEPRFKESLKNFRKANYEIEVTRL 1123

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SEGAG 1081
              +DL +Y  AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+ + 
Sbjct: 1124 CIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASA 1183

Query: 1082 TR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTN
Sbjct: 1184 DRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTN 1243

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV +++   
Sbjct: 1244 LDRANINSLCEALNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNEECK 1300

Query: 1200 SII 1202
            S+I
Sbjct: 1301 SVI 1303



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 34/241 (14%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 111 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 170

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 171 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVK 230

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ + Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 231 TLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEIRNVEFEIGKYQAQKVEMDTKHKNCK 290

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +    F             +++ D+E+ N+      +  KR   E D+S+++
Sbjct: 291 DQISTLTLKIKKPFRGT----------LDELDQEISNFDQRMLEMRQKRTEVEGDLSQIK 340

Query: 221 R 221
           R
Sbjct: 341 R 341


>gi|28317081|gb|AAO39559.1| LP09268p, partial [Drosophila melanogaster]
          Length = 1322

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/388 (36%), Positives = 222/388 (57%), Gaps = 43/388 (11%)

Query: 828  KLLSDYNDLKV------KLNREYEEQAEQKINFQQEIEMLLKIASKIKEYYDLRKDERFK 881
            +L S YN  K       +LN+E E+ A  K++ + EI+ L               DE   
Sbjct: 950  QLNSKYNSYKSTDHDIQRLNKEAEDYA--KLDLRNEIKKL---------------DEIIM 992

Query: 882  ELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKF 941
              ++K  + E+E+    ++TDE    L+  K    NQ  + R+++DN   ++ + K  K 
Sbjct: 993  ASKDKLRKLEAEIS---LKTDE----LETIKTECSNQQTVERDLKDNRELKQLEDKEAKL 1045

Query: 942  ASEIESLEERV--LKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKID 999
                + L++++  L    VS  +  L K   +RD+         G +    + +++ + +
Sbjct: 1046 RESCQVLDKQLGNLDFHSVSKEKVNLTK---QRDKATVRKGELLGQLGEIHSQVNKLQRE 1102

Query: 1000 LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
            + + ++K+  K       +++ T +  +DL +Y  AL+ AL++FH+ KME IN++IRE W
Sbjct: 1103 IDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEKMEMINRLIREYW 1162

Query: 1060 QQTYRGQDIDYIRIHSD---SEGAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASL 1114
            ++ YRG DIDYI++ +D   S+ +  R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASL
Sbjct: 1163 RKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASL 1222

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDE 1174
            IIRLALAETF  NCG+LALDEPTTNLD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE
Sbjct: 1223 IIRLALAETFSSNCGVLALDEPTTNLDRANINSLCEALNCIVEERQSQSNFMLIIITHDE 1282

Query: 1175 RFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             F   +G+      Y+RV +++   S+I
Sbjct: 1283 NFVSSLGK---ITSYHRVFRNEECKSVI 1307



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 34/241 (14%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 115 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 174

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 175 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVK 234

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ + Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 235 TLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEIRNVEFEIGKYQAQKVEMDTKHKNCK 294

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +    F             +++ D+E+ N+      +  KR   E D+S+++
Sbjct: 295 DQISTLTLKIKKPFRGT----------LDELDQEISNFDQRMLEMRQKRTEVEGDLSQIK 344

Query: 221 R 221
           R
Sbjct: 345 R 345


>gi|269914207|gb|ACZ52623.1| FI13085p [Drosophila melanogaster]
          Length = 1322

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 186/303 (61%), Gaps = 13/303 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETE 964
            EL+  K    NQ  + R+++DN   ++ + K  K     + L++++  L    VS  +  
Sbjct: 1011 ELETIKTECSNQQTVERDLKDNRELKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVN 1070

Query: 965  LGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            L K   +RD+         G +    + +++ + ++ + ++K+  K       +++ T +
Sbjct: 1071 LTK---QRDKATVRKGELLGQLGEIHSQVNKLQREIDEPRFKESLKNFRKANYEIEVTRL 1127

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SEGAG 1081
              +DL +Y  AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+ + 
Sbjct: 1128 CIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASA 1187

Query: 1082 TR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
             R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTN
Sbjct: 1188 DRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTN 1247

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV +++   
Sbjct: 1248 LDRANINSLCEALNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNEECK 1304

Query: 1200 SII 1202
            S+I
Sbjct: 1305 SVI 1307



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 34/241 (14%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 115 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 174

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 175 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVK 234

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ + Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 235 TLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEIRNVEFEIGKYQAQKVEMDTKHKNCK 294

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +    F             +++ D+E+ N+      +  KR   E D+S+++
Sbjct: 295 DQISTLTLKIKKPFRGT----------LDELDQEISNFDQRMLEMRQKRTEVEGDLSQIK 344

Query: 221 R 221
           R
Sbjct: 345 R 345


>gi|194754908|ref|XP_001959734.1| GF11892 [Drosophila ananassae]
 gi|190621032|gb|EDV36556.1| GF11892 [Drosophila ananassae]
          Length = 1308

 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/331 (36%), Positives = 193/331 (58%), Gaps = 21/331 (6%)

Query: 883  LQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFA 942
            L+E    S  +++  +++ D    +++  K   RNQ  + R+++DN   ++ + K  K +
Sbjct: 982  LEEVIKASNEQIRKLELQIDSKTGQVESIKTECRNQQNVERDLKDNRELKQLQEKESKLS 1041

Query: 943  SEIESLEERV--LKIGGVSTFETELGKH----LLERDRLLSEVNRCQGTMSVYQTNISRN 996
                +L +++  L    V+  + EL K      + +  LL ++      +   +  I   
Sbjct: 1042 ESCVALSKQLGNLDFRSVTKEKLELTKRRDASTVRKGELLGQLGEINCQVKRLEQEIDEP 1101

Query: 997  KIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIR 1056
            K+   +  +K+  K +++ ++  +  +    DL +Y  AL+ AL++FH  KME IN++IR
Sbjct: 1102 KL---KESFKNFQKANYELVVMRRCID----DLGQYRMALEWALIQFHAEKMENINRLIR 1154

Query: 1057 ELWQQTYRGQDIDYIRIHSDSEGAGT-----RSYSYKVLMQTGDAELEMRGRCSAGQKVL 1111
            E W+  YRG DIDYI++ +D   A       ++Y+Y+V+    + E+EMRGRCSAGQ+VL
Sbjct: 1155 EYWRMIYRGNDIDYIQVKTDDISANANADRRKTYNYRVVQSKNNTEIEMRGRCSAGQRVL 1214

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVIT 1171
            ASLIIR+ALAETF  NCG+LALDEPTTNLD  N  SL  AL+ I+E+R+ Q NF LI+IT
Sbjct: 1215 ASLIIRMALAETFSSNCGVLALDEPTTNLDRINITSLCDALNCIVEERQSQSNFMLIIIT 1274

Query: 1172 HDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            HDE F   +G+      Y+RV ++D   S+I
Sbjct: 1275 HDENFISSLGK---INSYHRVFRNDECKSVI 1302


>gi|194882203|ref|XP_001975202.1| GG22190 [Drosophila erecta]
 gi|190658389|gb|EDV55602.1| GG22190 [Drosophila erecta]
          Length = 1303

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 179/293 (61%), Gaps = 13/293 (4%)

Query: 917  NQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETELGKHLLERDR 974
            NQ  + R+++DN   ++ + K  K     ++L++++  L    VS  + EL     +RD+
Sbjct: 1002 NQLTVERDLKDNRELKQLEDKESKLRESCQTLDKQLGNLDFHSVSKEKVELTN---QRDK 1058

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYN 1034
                     G +      + + + ++ + ++K+  K       +++ T +  +DL +Y  
Sbjct: 1059 ATVRKGELLGQLGEINNQVKKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRL 1118

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-----RSYSYKV 1089
            AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   A       ++Y+Y+V
Sbjct: 1119 ALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSADASADRRKTYNYRV 1178

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
            +     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTNLD  N  SL 
Sbjct: 1179 VQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTNLDRANINSLC 1238

Query: 1150 AALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
             AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV ++D   S+I
Sbjct: 1239 EALNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNDECKSVI 1288


>gi|396081692|gb|AFN83307.1| Rad50-like DNA repair protein [Encephalitozoon romaleae SJ-2008]
          Length = 1249

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 101/193 (52%), Positives = 134/193 (69%), Gaps = 3/193 (1%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
             I+LK  EMA  DLD+   ALDKA++ FHT K+EEIN  +++LW+ TYRG D+D+I I +
Sbjct: 1047 FIELKALEMACLDLDKCIQALDKAIIDFHTSKLEEINATLKDLWEHTYRGDDVDWIEIKT 1106

Query: 1076 DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
            +S   G ++YSYKV+   G  ELEMRGR SAGQK++AS++IRLAL+ +F  NC ILALDE
Sbjct: 1107 ES--LGQKTYSYKVVFIKGGVELEMRGRSSAGQKMIASILIRLALSNSFASNCNILALDE 1164

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA  L R++   K    FQLIVITHDE F QL+  R   E +YR+ ++
Sbjct: 1165 PTTNLDRDNIESLAFTLSRVISRHKENSGFQLIVITHDEDFVQLL-SRDGPEHFYRLNRN 1223

Query: 1196 DHQHSIIEAQEIF 1208
            +   S+I    ++
Sbjct: 1224 EDGDSVIVRHSVY 1236


>gi|195346724|ref|XP_002039907.1| GM15911 [Drosophila sechellia]
 gi|194135256|gb|EDW56772.1| GM15911 [Drosophila sechellia]
          Length = 1303

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 261/471 (55%), Gaps = 35/471 (7%)

Query: 746  KDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVK-KAEEELEHLMEE 804
            K  +  ELE  R E    +N +       + LRE+K    N+L+D +    E L+ L + 
Sbjct: 839  KSKVSRELETERKELESAQNAVQQQMDALNRLREKK----NSLKDRQIHLREGLQSLPQL 894

Query: 805  KGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKI 864
            K +L+     L   +  +S+ K K+      LK+ L    EE+   K   + E E L ++
Sbjct: 895  KERLEKLNSFLTTVASEISELKAKI----QPLKLNLRAAIEEKESLK---KSESEKLAQL 947

Query: 865  ASKIKEYYDLRKD-ERFKELQEKKSQSE--SEVKSCKIRTDEIL-VELDRFKDIVR--NQ 918
             SK   Y    +D +R  +  E  ++ +  +E+K    + DEI+    D+ + + +  NQ
Sbjct: 948  NSKYNSYKSTDQDIQRLNKEAEDYTKLDLRNEIK----KLDEIIRASKDQLRKLAKCSNQ 1003

Query: 919  DQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETELGKHLLERDRLL 976
              + R+++DN   ++ + K  K     + L++++  L    VS  +  L K   +RD+  
Sbjct: 1004 QTVERDLKDNRELKQLEDKEAKLKESCQMLDKQLGNLDFHSVSKEKVNLTK---QRDKAT 1060

Query: 977  SEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNAL 1036
                   G +    + +++ + ++ + ++K+  K       +++ T +  +DL +Y  AL
Sbjct: 1061 VRKGELLGQLGEINSQVNKLQREIDEPRFKESLKNFRRANYEIEVTRLCIEDLGQYRLAL 1120

Query: 1037 DKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SEGAGTR--SYSYKVLM 1091
            + AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+ +  R  +Y+Y+V+ 
Sbjct: 1121 EWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQ 1180

Query: 1092 QTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
                +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEPTTNLD  N  SL  A
Sbjct: 1181 SKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEPTTNLDRANINSLCEA 1240

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            L+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV +++   S+I
Sbjct: 1241 LNCIVEERQSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNEECKSVI 1288



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 34/241 (14%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 111 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 170

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 171 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVK 230

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ + Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 231 TLNLQKAQRKCDAIKAQCSECEEEMKPIETRLVEIRNVEFEIGKYQAQKVEMDTKHKNCK 290

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +    F             +++ D+E+ N+    + +  KR   E ++S+++
Sbjct: 291 DQISTLTLKIKNPFRGT----------LDELDQEISNFDQRMQEMRQKRTEVEGNLSQIK 340

Query: 221 R 221
           R
Sbjct: 341 R 341


>gi|82595351|ref|XP_725813.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23480956|gb|EAA17378.1| unnamed protein product [Plasmodium yoelii yoelii]
          Length = 1919

 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 6/224 (2%)

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
            QG + +    + + K D+K   Y++ID  +  +LI++   +   KDL  ++N+ D+A+++
Sbjct: 1689 QGKICLRNEYVEKLKKDIKSGSYENIDNEYKKKLIEICVYKNVIKDLSNFHNSFDQAIIK 1748

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT------RSYSYKVLMQTGDA 1096
            FH++KM+EIN  I+ LW++ Y   DIDYI I SD E          RSY+Y+V+M   + 
Sbjct: 1749 FHSLKMQEINLSIKNLWRRVYNNPDIDYIYIKSDLEIENNEKINQRRSYNYRVVMVKDNC 1808

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            EL+M+GRCS+GQKVL+S+IIRLALAE+F + CGILALDEPTTNLD  N+++LA  +  I+
Sbjct: 1809 ELDMKGRCSSGQKVLSSIIIRLALAESFSIKCGILALDEPTTNLDKSNSKNLANLIANIV 1868

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            + RK   +FQLI+ITHD  F   + Q      +Y+V KD + +S
Sbjct: 1869 DLRKNSSSFQLILITHDTYFVDALSQYGLTNCFYKVRKDRNGYS 1912



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 30/223 (13%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G+ + ++ +C D++  +P LMGVSKA+LENVI  H DE+ WP  + + +KKKFD++F   
Sbjct: 158 GDDIIITNKCVDINCHIPKLMGVSKALLENVILCHHDESLWPFSESTKIKKKFDELFGDD 217

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEA------- 130
            ++K LE + K  K   + +K    +L N++     +Y+ +++I  + EK +A       
Sbjct: 218 NFSKILEELVKCKKKMNEILKKKNYELINIKD----SYEKKKNIFLEIEKNQAEIENEKI 273

Query: 131 -LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ---KQYAA 186
            ++ + +EL+K    +D          K+   +  +IS+       L+E+ Q   +QY  
Sbjct: 274 FIQQEKEELKKKTILLDQ--------FKNKNNILYKISSDIDTYFVLYERHQSDIQQYKN 325

Query: 187 LAEEIEDTDEELKNWKNNFEG-------IVAKRESDISKLERE 222
           + E  E++  EL+ + + F+        ++ K   +I KLE E
Sbjct: 326 MKEIYEESSSELEKFSDLFKTDLIKCNELIEKINDEIIKLEEE 368


>gi|449018684|dbj|BAM82086.1| DNA repair protein RAD50 [Cyanidioschyzon merolae strain 10D]
          Length = 1322

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/290 (39%), Positives = 167/290 (57%), Gaps = 18/290 (6%)

Query: 917  NQDQIRRNIEDNLNYR-------ETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHL 969
            N D   R + DNL YR       E + K  + AS +   +E    +  +   + E     
Sbjct: 1003 NADSYLRQVRDNLRYRQLQEMLVELQQKDVELASTLPMTDEHDPHVSALEAAKAEA---- 1058

Query: 970  LERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDL 1029
               D L  +V+  +G   +    +    ++L    +   +++     +Q    E+  +DL
Sbjct: 1059 ---DTLREKVHHLRGQRDLLAEQLRALTVELDADVFAQAEQQFQALRLQCDVIELVCRDL 1115

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD----SEGAGTRSY 1085
              Y+ ALD A+MR+H +KM  IN+++RELWQ TY G DI+ I I SD    S   G R+Y
Sbjct: 1116 RNYHRALDLAIMRYHDLKMRSINRVLRELWQSTYLGSDIEEIEIRSDFVADSLPMGRRTY 1175

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
             Y+V+M+ GD  L+MRGRCSAGQKVLA L+IRLALAE F   CG+LALDEPTTNLD  + 
Sbjct: 1176 HYRVVMRQGDTWLDMRGRCSAGQKVLACLLIRLALAENFGNACGVLALDEPTTNLDESHV 1235

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            ++LAA+L  +++ R  Q NFQLI+ITH+ERF   +  R++A+ Y  V ++
Sbjct: 1236 KALAASLSLLIQQRAQQRNFQLILITHEERFLDYLHIREYADSYIYVTRN 1285



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +  +E+ L +I    G+ +  S RC D++   PA +GV +A+LENVIFVHQ+E+ WPLQD
Sbjct: 111 FSTVETSL-SIRDKDGQHIKTSNRCNDINAMAPAFLGVRQAVLENVIFVHQEESLWPLQD 169

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLE----NLQTLKDAAYKLR 118
           P  +K+KFDDIF A  Y KAL  I+K  + +  E+K    +LE     L+ LK      R
Sbjct: 170 PKKVKEKFDDIFEARGYAKALIAIQKCAQQKLAELKILHSELERWRDRLENLKQKQRNCR 229

Query: 119 ESISQDQEKTEALKNQMQELEKSIQDIDD 147
              +Q  E + +L     EL + I+ + +
Sbjct: 230 SMQAQCLEWSNSLGTLETELSEKIRAVTE 258


>gi|157106785|ref|XP_001649480.1| DNA repair protein rad50 [Aedes aegypti]
 gi|108868772|gb|EAT32997.1| AAEL014748-PA [Aedes aegypti]
          Length = 1051

 Score =  204 bits (519), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 267/1064 (25%), Positives = 497/1064 (46%), Gaps = 115/1064 (10%)

Query: 197  ELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMS 256
            EL+    NF+   + +  ++ + E + +    + K L+  I  + +   +L ++ G    
Sbjct: 50   ELEIEIQNFKQSKSSKLLELREAESDLSSRKAQEKVLQSKIQDFESRRIHLNTKRGQEQD 109

Query: 257  RMNERDSTIQKLFARHNL---GSLPNAPFSNEAALNFI-NRIRSRLSDLERDLEDKKKSD 312
               +R   +  L  R  L   G         E+AL  I + IRS  + ++   +   ++D
Sbjct: 110  LCGDRSKKMVALCDRLKLPAVGDFEAGGADVESALKAIKHGIRSEETAVQTLSKSHDEAD 169

Query: 313  ELALKMAWD------SYLDANDRWKN------IEAQKQAKMEIKA------GILKHIKEK 354
              A K A D      + L+A+ R K       +  + + + EI A       + K + E 
Sbjct: 170  HKAQK-AIDKLREDKTKLEADFRMKGQMVADFVREKAKTQSEIAAIQRSAETLKKIVTEI 228

Query: 355  ENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKI 414
            E     +E Q SN N              VE    QLAE+  +I   + Q++L  ++++I
Sbjct: 229  EKLEKDYENQKSNSN--------------VEGMRRQLAEK--KIKREELQAKLDRVEEQI 272

Query: 415  KALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
             AL    D +A  +    +L LK+ +    + + K++ +++ + ++ +   +  +D + K
Sbjct: 273  SAL----DAVAAKA---TELHLKEQQFNAKELEFKRLRNKHTENLKRLFPSK-TIDTNYK 324

Query: 475  KEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHRKDVDSKKRFIESKL 534
            + +        T +DDL  + ++ ++ +   Q  + E+       ++++D     +E +L
Sbjct: 325  RNVQ-------TLYDDLQRQIKQLNESMRKSQATVTEMETTRRSQKRELDR----VEREL 373

Query: 535  ESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIADG-MRQ---MFDPFERVARAHHV 587
                ++I+++   + +++VL   K+K     SK N+  G +R    ++  +         
Sbjct: 374  TENKEKIYTVCQGNPFEEVLAKLKDK----ISKNNLEHGELRSAEVLYKKYISRIEDDKC 429

Query: 588  CPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVK 647
            CP C +     +  +   +   +     E ++ L          + QL  L+  Y E + 
Sbjct: 430  CPVCHKGMDGADVQDISSELSDEIRRLPEKIEALERMLKADQKKYDQLLALQ-PYSERIA 488

Query: 648  LSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQE 707
               E IP  ++ L E   +L Q S   ++    + +  +  + +  ++  +   D   ++
Sbjct: 489  KQTEEIPKLKEQLEETERKLVQASSDLEECQMSILEPNSSVQLINSILGDMSILDESVRD 548

Query: 708  IQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDNLQNELEKLRDEQRY----- 762
            I   +K +++L+  +      V+T E       G+ ++ D+++ E E LR E R      
Sbjct: 549  IDRMKKGIENLKIEV-----AVKTPE-------GTTASLDDIKLEREALRGELRVERISI 596

Query: 763  --MEND-------LSNIQIRWHTLREEKVKAANTLR--DVKKAEE-EL-EHLMEEKGQLD 809
              M+N        L+N+  R++ ++E+K++   +++  D KKA+E EL E +   + ++D
Sbjct: 597  DAMQNKIDEETERLNNLHQRYNQMKEKKIQLQESVQSLDQKKAKELELGEKIASCQREMD 656

Query: 810  LDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASKIK 869
              E  L      L  E++         +  LN+   E  E K     EI   +++  ++ 
Sbjct: 657  ETENKLGPVKQNLITEEKSKAKAKEGNRANLNKAQAELEELK-RMDAEI---VRLCKELD 712

Query: 870  EYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNL 929
                L   E  ++++ K  +S  E+K      DE   ++D  K  V NQD I R+  DN 
Sbjct: 713  ALSRLNLAEEIQKIKRKLQESNEEMKKIIAAIDEKTYQIDSLKKEVMNQDMIERDYLDNR 772

Query: 930  NYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVY 989
            +  + K +       +++L + +  +   +  + E  K L +RD + S  ++  G ++  
Sbjct: 773  DLMKLKDETTSLKQGLDALMQSIGDMDAPNVAQ-ERNKLLEQRDAIQSTKSQTTGQIAEL 831

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            +      K +L ++++K+  K +     +    +    D+ +Y NAL+ ALM++H  KME
Sbjct: 832  ENQSKALKKELDRSEFKNAVKNYLKTYSESVVLKKMISDILKYRNALEWALMKYHAEKME 891

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGAG------TRSYSYKVLMQTGDAELEMRGR 1103
            +IN+ I  LW+  YRG DIDYIRI ++ E          R Y Y+V+    D E++MRGR
Sbjct: 892  QINRSIYSLWRDIYRGNDIDYIRIKTEDESKPDKVTDKRRQYHYRVVQAKNDVEIDMRGR 951

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
            CSAGQKVLASLIIR+ALAETF  NCG++ALDEPTTNLD  N  SL  +L RI+ +R+   
Sbjct: 952  CSAGQKVLASLIIRMALAETFSNNCGVMALDEPTTNLDRENIASLCESLRRIVTERENG- 1010

Query: 1164 NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            NF L++ITHDE F   + + +  + YYRV++D    SII+ +++
Sbjct: 1011 NFLLVIITHDEDF---VTKLEKFDTYYRVSRDHDGKSIIKEEQL 1051


>gi|303389895|ref|XP_003073179.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC
            50506]
 gi|303302324|gb|ADM11819.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC
            50506]
          Length = 1240

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 97/193 (50%), Positives = 137/193 (70%), Gaps = 3/193 (1%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
             I++K  E+++ DL++   ALDKA++ FHT K+EE+N  +++LW  TYRG D+D+I I +
Sbjct: 1048 FIEVKALEISSLDLEKCIQALDKAIVDFHTSKLEEVNATLKDLWMNTYRGDDVDWIEIKT 1107

Query: 1076 DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
            +S  +G R+Y+YKV+   G  EL+MRGR SAGQK++AS++IRLALA++F  NC ILALDE
Sbjct: 1108 ES--SGQRTYNYKVVFIKGGVELDMRGRSSAGQKMIASILIRLALADSFASNCNILALDE 1165

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA  L +I+   K   NFQLIVITHDE F QL+  R   E +YR++++
Sbjct: 1166 PTTNLDRDNIESLAFTLSKIISKHKKDSNFQLIVITHDEDFVQLL-SRDGPEYFYRLSRN 1224

Query: 1196 DHQHSIIEAQEIF 1208
             +  S I    ++
Sbjct: 1225 GNGDSTIVRHSVY 1237


>gi|167516572|ref|XP_001742627.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779251|gb|EDQ92865.1| predicted protein [Monosiga brevicollis MX1]
          Length = 204

 Score =  204 bits (518), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 96/196 (48%), Positives = 138/196 (70%), Gaps = 5/196 (2%)

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
            +++ +  ++  ++++ +  + A  DL  ++ ALD+A+ ++H +KM+EINKII+ELWQ TY
Sbjct: 1    RFRGVAAQYEKKVVESEARKQAISDLQSFHRALDRAITKYHDLKMDEINKIIKELWQNTY 60

Query: 1064 RGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRL 1118
            RG DIDYI I ++     S  +   + +Y+V+M  GD  L+MR RCSAGQ+V+ASLIIRL
Sbjct: 61   RGHDIDYIEIDTNWGDETSTTSKRNAVNYRVVMIKGDTRLDMRNRCSAGQRVMASLIIRL 120

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQ 1178
            ALAE FC+NCG++ LDEPTTNLD  N  SLA  L  I++ R  Q NFQL++ITHDE+F +
Sbjct: 121  ALAEAFCINCGVMTLDEPTTNLDRENINSLAFCLSNIVKHRSQQRNFQLLIITHDEQFLE 180

Query: 1179 LIGQRQHAEKYYRVAK 1194
             + Q   A+ YYRV K
Sbjct: 181  QLHQYGQAKTYYRVFK 196


>gi|195027447|ref|XP_001986594.1| GH20438 [Drosophila grimshawi]
 gi|193902594|gb|EDW01461.1| GH20438 [Drosophila grimshawi]
          Length = 1307

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 188/598 (31%), Positives = 309/598 (51%), Gaps = 60/598 (10%)

Query: 642  YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESV-EVLVQP--- 697
            YEE +++     P  +K + EL E L +K +    +   L++I A  E++ E L +P   
Sbjct: 727  YEELLQIK----PAIDK-VQELKELLPKKKEELRMIGQRLSEIVAKYETLKEQLGEPTVN 781

Query: 698  VETADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSLSTKDN---LQNELE 754
            +E A+ +  ++ L       L+  L    +  + +++++L+L  S     N   LQ E  
Sbjct: 782  MELANSMLPDMTL-------LDESLKESARVKKDLDQLKLKLPASYDASVNTEALQAEKT 834

Query: 755  KLRDE----QRYMENDLSNIQIRW---HTLREEKVKAANTLRDVKKAEEELEHLMEEKGQ 807
            ++  E     + +E +  N + +    H LRE+K    + +  +K+ E+ L    E + +
Sbjct: 835  EVSKEIVADAKALETEQQNFEQKMEALHQLREKKNGLKDKMIKLKEGEQSLPQFKERQDE 894

Query: 808  L-DLDEKLLAEAS------GPLSKEKEKLLSDYNDLK----VKLNREYEEQAEQKINFQQ 856
            L +L   L AE S       PL +     LS+   LK    VKL+ E +++ ++  +  Q
Sbjct: 895  LSNLLIALTAEISELESKIRPLKQRLSSALSEKARLKESERVKLS-EMQKKYQEYKSTDQ 953

Query: 857  EIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVR 916
            +I+ L K   +++E+  L      K+L    + +  E+   K +  E   +L+  K    
Sbjct: 954  DIQRLKK---EMQEFAKLDLANAIKKLDAAINGTNEELNKLKGKIIETSEKLESVKTECL 1010

Query: 917  NQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFETELGKHLLERDR 974
            NQ+ + R+++DN   ++ + K  K +   ++L E++  L    V+  + EL K   E   
Sbjct: 1011 NQETLERDLKDNRELKQLQQKQSKLSEICQTLSEQLGNLDFRNVTKEKQELSKKQKE--- 1067

Query: 975  LLSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRY 1032
              + V R Q  G +   Q  +   + D+ Q +YK     +     ++        DL ++
Sbjct: 1068 --AYVRRAQLFGQLGEIQIQVENLQRDIDQPKYKQSMNNYRRAQFEVAVKRRGIDDLGQH 1125

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSE------GAGTR-SY 1085
              AL+ AL++FH  KM  IN +IRE W+  Y+G DIDYI+I ++ E       A  R SY
Sbjct: 1126 RVALEWALIQFHAEKMSNINSLIREYWRMIYKGNDIDYIQIKTNDEDDDKKASADRRKSY 1185

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+    ++E+EMRGRCSAGQ+VL SLIIR+ALAETF  NCG+LALDEPTTNLD  N 
Sbjct: 1186 NYRVVQSKNNSEIEMRGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTNLDRDNI 1245

Query: 1146 ESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
             SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      Y+RV ++    S+I+
Sbjct: 1246 ISLCDALNSIVENRQFQSNFMLIIITHDENFISSLGR---INSYHRVYRNPEGKSVIQ 1300


>gi|195402597|ref|XP_002059891.1| GJ14987 [Drosophila virilis]
 gi|194140757|gb|EDW57228.1| GJ14987 [Drosophila virilis]
          Length = 1312

 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 179/304 (58%), Gaps = 13/304 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            +L+  K    NQ  + R+++DN   ++ + K  + +   ++L +   ++G +        
Sbjct: 1008 QLETLKTECLNQQSLERDLKDNRELKQLQLKEAELSENCQTLSK---QLGNLDFRSVTKE 1064

Query: 967  KHLLERDRLLSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            K+ L + R ++ V R +  G        +++ ++++ + +YK+  K +     ++     
Sbjct: 1065 KNELMKRRDMASVRRGELLGQQGEINNQVAKLQMEISEPKYKESMKNYMRGQFEVAVKRR 1124

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEG 1079
               DL ++  AL+ AL++FH  KM  IN +IRE W+  YRG DIDYI+I +D     +  
Sbjct: 1125 GIDDLGQHRVALEWALIQFHAEKMNNINSLIREYWRMIYRGNDIDYIQIKTDELDKDASA 1184

Query: 1080 AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
               ++Y+Y+V+    ++E+EMRGRCSAGQ+VL SLIIR+ALAETF  NCG+LALDEPTTN
Sbjct: 1185 DRRKNYNYRVVQSKNNSEIEMRGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTN 1244

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+RI+E R+ Q NF LI+ITHDE F   +G+      Y+RV +D    
Sbjct: 1245 LDRDNIVSLCDALNRIVESRQYQSNFMLIIITHDENFISSLGR---ITSYHRVQRDSECK 1301

Query: 1200 SIIE 1203
            S+I+
Sbjct: 1302 SLIQ 1305


>gi|429963093|gb|ELA42637.1| hypothetical protein VICG_00389 [Vittaforma corneae ATCC 50505]
          Length = 1257

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/204 (46%), Positives = 141/204 (69%), Gaps = 6/204 (2%)

Query: 1005 YKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYR 1064
            Y + ++ +    +++KT E+   D+D+  N LDKA++ FH+ K+EE+NK +R+LW  TY+
Sbjct: 1056 YANSNRNYLTCAVEIKTLELGLDDMDKCINGLDKAIVDFHSSKIEEVNKTLRDLWSNTYK 1115

Query: 1065 GQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETF 1124
            G DIDYI + S+S  + TR+Y+Y+++M     EL+MRGR SAGQK++AS++ R+ALA++F
Sbjct: 1116 GNDIDYIELKSES--SETRAYNYRMVMVKSGVELDMRGRSSAGQKMIASILFRIALADSF 1173

Query: 1125 CLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQ 1184
               C +LALDEPTTNLD  N ESLA  L  I+++R    +FQLIVITHDE F QL+  R+
Sbjct: 1174 SCGCNVLALDEPTTNLDRENIESLAQTLSLIIKERT---DFQLIVITHDEEFVQLLN-RE 1229

Query: 1185 HAEKYYRVAKDDHQHSIIEAQEIF 1208
              E +YR+ +D   +  IE   I+
Sbjct: 1230 GTEYFYRLKRDSKGNGHIERHSIY 1253



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 22/186 (11%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G +V ++ +  D+D++VP  +GVS +ILENVIF HQDE+ WP+ DP+ +KKK DDIFS+T
Sbjct: 122 GREVLITTKLGDIDKDVPEHLGVSYSILENVIFCHQDESIWPIGDPTVMKKKLDDIFSST 181

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQ--EKTEALKNQM 135
           +Y KAL  +K   K+ A ++   KLK + L      ++ L+E + +D   +K E+   +M
Sbjct: 182 KYNKALLGLKASKKEIAADL---KLKTQQL------SFFLKEKLKRDDLLKKIESYNEEM 232

Query: 136 QELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDTD 195
           ++    ++   D+    E  +K +           A    ++E+  + Y  L  E +   
Sbjct: 233 EKKNVKLRAFGDETARIERNMKSI-----------ANELVIYEKLDQNYKILKAEFDSCM 281

Query: 196 EELKNW 201
           + + N+
Sbjct: 282 KFISNF 287


>gi|449329508|gb|AGE95779.1| rad50-like DNA repair protein [Encephalitozoon cuniculi]
          Length = 1247

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 137/193 (70%), Gaps = 3/193 (1%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
             I++K  E++  DLD+   ALDKA++ FHT K+EE+N  +++LW  TYRG D+D+I+I +
Sbjct: 1047 FIEVKALELSCMDLDKCIQALDKAIVDFHTSKLEEVNATLKDLWTNTYRGDDVDWIKIKT 1106

Query: 1076 DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
            +S  +G R+Y+YKV+   G  EL+MRGR SAGQK++AS++IRLALA++F  +C +LALDE
Sbjct: 1107 ES--SGQRTYNYKVVFVKGGVELDMRGRSSAGQKMIASILIRLALADSFASSCSVLALDE 1164

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA  L R++   +   +FQLIVITHDE F QL+  R   E +YR+++ 
Sbjct: 1165 PTTNLDRDNIESLAFTLSRVISRHRRDADFQLIVITHDEDFVQLL-SRGGPEYFYRLSRS 1223

Query: 1196 DHQHSIIEAQEIF 1208
            +   S+I    I+
Sbjct: 1224 ESGDSMIVRHSIY 1236


>gi|344246902|gb|EGW03006.1| DNA repair protein RAD50 [Cricetulus griseus]
          Length = 680

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 185/633 (29%), Positives = 309/633 (48%), Gaps = 84/633 (13%)

Query: 587  VCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEY 645
             CP C+R F  E E  E +   + K   + + +K    E    +    ++  L  + +  
Sbjct: 23   CCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSI 82

Query: 646  VKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLF 705
            + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V +  V   +R  
Sbjct: 83   IDLKEKEIPELRNKLQSVNRDIQRLKTDIEEQETLLGTIMPEEESAKVCLTDVTIMER-- 140

Query: 706  QEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKDNLQNELEKLRDE 759
                 +Q ++ D+E  +  +    QGV   RT++++  E        D + +++E  R  
Sbjct: 141  -----FQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKL 195

Query: 760  QRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQLDLDEKLLAEAS 819
             +  +  + +++ + + L+ EK++ +  L+  ++ EE+   L  E   L  + K   E  
Sbjct: 196  IQDQQEQIQHLKSKTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQSLYREIKDAKEQI 255

Query: 820  GPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIASKIKEYYDLRKDE 878
             PL    EK   +  +L +   +   + A+ KIN  +++++ +      I+ Y    KD+
Sbjct: 256  NPLETALEKFQQEKEEL-IHRKQTSNKMAQDKINDIKEKVKNINGYMKDIENYIQDGKDD 314

Query: 879  RFKELQEKKSQSESEVKSCKIRTDEILVELDRFKD-IVRNQDQIRRNIEDNLNYRETKAK 937
                    K Q E+E+     +    L E D+ K+ I +    +R++I+           
Sbjct: 315  Y-------KKQKETELNEVVAQ----LNECDKHKEKINKEMGTMRQDIDTQKVGLSAHGI 363

Query: 938  VDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNK 997
               F  E + LEE +  I               +R+  L+ + R +G    Y+  I   K
Sbjct: 364  TTPFLYEHQKLEENIDTI---------------KRNHSLA-LGRQKG----YEEEILHFK 403

Query: 998  IDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRE 1057
             +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+   ++H++  +        
Sbjct: 404  KELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQD--KYHSVNCD-------- 453

Query: 1058 LWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQK--- 1109
                     DI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQK   
Sbjct: 454  ---------DIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKAVA 504

Query: 1110 ---------VLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRK 1160
                     VLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL  I++ R 
Sbjct: 505  MSGLNGLLEVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRS 564

Query: 1161 GQENFQLIVITHDERFAQLIGQRQHAEKYYRVA 1193
             Q NFQL+VITHDE F +L+G+ ++ EK+YR  
Sbjct: 565  QQRNFQLLVITHDEDFVELLGRSEYVEKFYRAP 597


>gi|19074483|ref|NP_585989.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1]
 gi|74697545|sp|Q8SRK6.1|RAD50_ENCCU RecName: Full=DNA repair protein RAD50
 gi|19069125|emb|CAD25593.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1]
          Length = 1247

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 137/193 (70%), Gaps = 3/193 (1%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
             I++K  E++  DLD+   ALDKA++ FHT K+EE+N  +++LW  TYRG D+D+I+I +
Sbjct: 1047 FIEVKALELSCMDLDKCIQALDKAIVDFHTSKLEEVNATLKDLWTNTYRGDDVDWIKIKT 1106

Query: 1076 DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
            +S  +G R+Y+YKV+   G  EL+MRGR SAGQK++AS++IRLALA++F  +C +LALDE
Sbjct: 1107 ES--SGQRTYNYKVVFVKGGVELDMRGRSSAGQKMIASILIRLALADSFASSCSVLALDE 1164

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA  L R++   +   +FQLIVITHDE F QL+  R   E +YR+++ 
Sbjct: 1165 PTTNLDRDNIESLAFTLSRVISRHRRDADFQLIVITHDEDFVQLL-SRGGPEYFYRLSRS 1223

Query: 1196 DHQHSIIEAQEIF 1208
            +   S+I    I+
Sbjct: 1224 ESGDSMIVRHSIY 1236


>gi|351697140|gb|EHB00059.1| DNA repair protein RAD50 [Heterocephalus glaber]
          Length = 1159

 Score =  200 bits (509), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 248/1074 (23%), Positives = 517/1074 (48%), Gaps = 90/1074 (8%)

Query: 2    EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
            E+K +E ++  I    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 139  EFKTLEGIISRIKH--GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEDSNWPLS 196

Query: 62   DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
            +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 197  EGKALKQKFDEIFSATRYIKALETLRQVRQAQGQKVKECQTELKYLKQNKEKACEIRDQI 256

Query: 122  SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
            +  + +  + K  ++  E  ++ +++++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 257  TSKEAQLMSSKEIIKSYENELEPLENRLEEIEHNLSKIMRLDNEIKALESRK----KQME 312

Query: 182  KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
            K  + L +++E     TDE+L +  +N +  V ++E  +   +RE + ++ + + L Q  
Sbjct: 313  KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELDKLNKESRLLNQEK 372

Query: 238  DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                 E   L  +A  H   +  RDS IQ L     L    + PFS+    NF   +R R
Sbjct: 373  SELLVEQGRLQLQADRHQEHIQARDSLIQSLATHLELEGFEHGPFSDRQIKNFHRLVRER 432

Query: 298  LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                      +++  E A K+  D       + K I+  +  K      ME+K+ IL   
Sbjct: 433  ----------QEQEAETAKKLMNDFEEKETLKQKQIDEIRDKKTGLGRIMELKSEIL--- 479

Query: 352  KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
             +K+NE  S + ++  L  S   +R  ++  E+ +  ++L++ E   NI   ++E+    
Sbjct: 480  SKKQNELKSVKYELQQLEGS--SDRILELDQELTKAEHELSKAEKNSNIETLKTEVINLQ 537

Query: 410  -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                 +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 538  NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 596

Query: 465  GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
            G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 597  GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKN 638

Query: 522  DVDSKKRFIESKLESLNQQIFSI---DTYQKVLDSAKEKRDVQKSKYNIA--DGMRQMFD 576
             + ++ +  E +L +   ++F +     ++  LD  KE  D++KS    A   G   ++ 
Sbjct: 639  HISNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKE--DIEKSSKQRAMLAGATAVYS 696

Query: 577  PF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQ 633
             F  +        CP C+R F  E E  E +   + K   + + +K   LE    +    
Sbjct: 697  QFITQLTDENESCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELKKKEKRRD 756

Query: 634  QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
            ++  L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V
Sbjct: 757  EMLGLVPMSQNIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKV 816

Query: 694  LVQPVETADRLFQEIQLWQKQVDDLEYMLDSRG---QGV---RTMEEIQLELSGSLSTKD 747
             +  V   +R       +Q ++ D+E  +  +    QG+   RT++++  E        D
Sbjct: 817  CLTDVTIMER-------FQMELKDVERKIAQQAAKLQGIDLDRTVQQVNKEKQEKQHKLD 869

Query: 748  NLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELEHLMEEKGQ 807
             + +++E  R   +  +  + +++   + L+ EK++ A  L+  ++ EE+   L  E   
Sbjct: 870  TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIATNLQRRQQLEEQTVELSTEVQS 929

Query: 808  LDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKIN-FQQEIEMLLKIAS 866
            L  + K   E   PL    E+   +  +L V   +   + A+ K+N  +++++ +     
Sbjct: 930  LHREIKDAKEQVNPLETALERFQQEKEEL-VNKKQASNKMAQDKLNDIKEKVKNIHGYVK 988

Query: 867  KIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIE 926
             I+ Y    KD+  K+ + + +   +++  C  + ++I  E+   +  +  Q    R ++
Sbjct: 989  NIENYVQDGKDDYKKQKETELNTVIAQLSECDKQKEKINKEMGTMRQDIDTQKIQERWLQ 1048

Query: 927  DNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFE--TELGKHLLERDRLLSEVNRCQG 984
            DNL  R+   ++ +        ++R+ ++G +   +  +E  K  +  D +    +   G
Sbjct: 1049 DNLTLRKRNEELKEVEE---ERKQRLKEMGQMQVLQMKSEHQKLKVNLDDIKRNRDLALG 1105

Query: 985  TMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDK 1038
                Y+  I R K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+
Sbjct: 1106 RQKGYEEEIIRFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQ 1159


>gi|118398608|ref|XP_001031632.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila]
 gi|89285963|gb|EAR83969.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila SB210]
          Length = 1303

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 7/201 (3%)

Query: 1003 AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1062
            A+Y   ++R+   L++L+      KD+  Y   LDK L+ +H  KME+INK I + W++ 
Sbjct: 1083 ARYDQAEERYCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWKKI 1142

Query: 1063 YRGQDIDYIRIHSD-SEGAGTRSYSYKVLMQTGD------AELEMRGRCSAGQKVLASLI 1115
            Y+GQDI  + I ++ +EG G + Y+Y+++M   D       E++M+GRCSAGQKVLAS+I
Sbjct: 1143 YQGQDIVKVEIKAEEAEGRGKKIYNYRIVMFIYDEKDKDLKEIDMKGRCSAGQKVLASII 1202

Query: 1116 IRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDER 1175
            IRLALAE F +NCGILALDEPTTNLD  +A+ L   L  ++E RKGQ +FQLI+I+HD+ 
Sbjct: 1203 IRLALAEAFTMNCGILALDEPTTNLDKLHAQKLGEQLCELIESRKGQSSFQLIIISHDKD 1262

Query: 1176 FAQLIGQRQHAEKYYRVAKDD 1196
            F  L+ QRQH   +Y V K++
Sbjct: 1263 FIHLMQQRQHCSDFYYVYKEN 1283


>gi|86170605|ref|XP_966048.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7]
 gi|259551807|sp|C6KSQ6.1|RAD50_PLAF7 RecName: Full=Probable DNA repair protein RAD50
 gi|46362290|emb|CAG25228.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7]
          Length = 2236

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 6/211 (2%)

Query: 999  DLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            D+K     +IDK +  ++I++   +   KDL  ++ + D+A+++FH++KM+EIN  I+ L
Sbjct: 2022 DIKSETLINIDKEYKKKIIEIFVYKNLIKDLQNFHFSFDQAIIKFHSLKMQEINLSIKNL 2081

Query: 1059 WQQTYRGQDIDYIRIHSDSEGAGT------RSYSYKVLMQTGDAELEMRGRCSAGQKVLA 1112
            W++ Y   DIDYI I SD +   T      RSY+Y+V+M   + EL+M+GRCS+GQKVL+
Sbjct: 2082 WRRVYNSADIDYIYIKSDIQTEPTDKSSQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLS 2141

Query: 1113 SLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITH 1172
            S+IIRLALAE+F + CGILALDEPTTNLD  N+ +LA+ L  I+E RK   +FQLI+ITH
Sbjct: 2142 SIIIRLALAESFSIKCGILALDEPTTNLDKANSRNLASLLANIVELRKSSSSFQLILITH 2201

Query: 1173 DERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            D  F  ++ Q      +Y++ K++  +S IE
Sbjct: 2202 DNYFVDILSQYGLTNCFYKIKKNNLGYSKIE 2232



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 49/74 (66%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G+ + ++ +C D++  +P LMGVSKA+LENVIF H DE  WP  +   +KKKFD++F   
Sbjct: 129 GDDLIITNKCVDINNHIPKLMGVSKALLENVIFCHHDENLWPFSESIKIKKKFDELFGDD 188

Query: 78  RYTKALEVIKKLHK 91
            ++K LE + K  K
Sbjct: 189 HFSKILEELLKCKK 202


>gi|195585702|ref|XP_002082619.1| GD11670 [Drosophila simulans]
 gi|194194628|gb|EDX08204.1| GD11670 [Drosophila simulans]
          Length = 1301

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 265/486 (54%), Gaps = 44/486 (9%)

Query: 731  TMEEIQLELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRD 790
            +M+++Q E       K  +  ELE  R E    +N +       + LRE+K    N+L+D
Sbjct: 831  SMDDLQTE-------KSKVSRELETERKELESAQNAVQQQMDALNRLREKK----NSLKD 879

Query: 791  VK-KAEEELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAE 849
             +    E L+ L + K +L+     L   +  +S+ K K+      LK+ L    EE+  
Sbjct: 880  RQIHLREGLQSLPQLKERLEKLNSFLTTVASEISELKAKI----QPLKLNLRAAIEEKER 935

Query: 850  QKINFQQEIEMLLKIASKIKEYYDLRKD-ERFKELQEKKSQSE--SEVKSCKIRTDEIL- 905
             K   + E E L ++ SK   Y    +D +R  +  E  ++ +  +E+K    + DEI+ 
Sbjct: 936  LK---KSESEKLAQLNSKYNSYKSTDQDIQRLNKEAEDYAKLDLRNEIK----KLDEIIK 988

Query: 906  VELDRFKDIVR--NQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTF 961
               D+ + + +  NQ  + R+++DN   ++ + K  K     + L++++  L    VS  
Sbjct: 989  ASKDQLRKLAKCSNQQTVERDLKDNRELKQLEDKEAKLKESCQMLDKQLGNLDFHSVSKE 1048

Query: 962  ETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKT 1021
            +  L K   +RD+         G +    + +++ + ++ +  +K+  K       +++ 
Sbjct: 1049 KVNLTK---QRDKATVRKGELLGQLGEINSQVNKLQREIDEPIFKESLKNFRRANYEIEV 1105

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD---SE 1078
            T +  +DL +Y  AL+ AL++FH+ KME IN++IRE W++ YRG DIDYI++ +D   S+
Sbjct: 1106 TRLCIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSD 1165

Query: 1079 GAGTR--SYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
             +  R  +Y+Y+V+     +E+EMRGRCSAGQ+VLASLIIRLALAETF  NCG+LALDEP
Sbjct: 1166 ASADRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEP 1225

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N  SL  AL+ I  +R+ Q NF LI+ITHDE F   +G+      Y+RV +++
Sbjct: 1226 TTNLDRANITSLCEALNCI--ERRSQSNFMLIIITHDENFVSSLGK---ITSYHRVFRNE 1280

Query: 1197 HQHSII 1202
               S+I
Sbjct: 1281 ECKSVI 1286


>gi|195119820|ref|XP_002004427.1| GI19621 [Drosophila mojavensis]
 gi|193909495|gb|EDW08362.1| GI19621 [Drosophila mojavensis]
          Length = 1312

 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 177/304 (58%), Gaps = 13/304 (4%)

Query: 907  ELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELG 966
            EL+  K    +Q  + R+++DN   ++ + K    + + + L +   ++G +        
Sbjct: 1007 ELEAIKKKCFDQQALERDLKDNRELKQLQLKESALSEDCKRLAK---QLGNLDFRSVTKE 1063

Query: 967  KHLLERDRLLSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEM 1024
            K+ L R R ++ V R +  G        +++ + ++ + +YK+  K +     ++   + 
Sbjct: 1064 KNELIRKRDVATVRRGELLGQQGEINNQVNKLQKEMAEPRYKESMKNYMRAKFEVAVKQC 1123

Query: 1025 ANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT-- 1082
              +DL R+  ALD AL+ FH  KM  IN +IRE W+  YRG DIDYI+I +D   + T  
Sbjct: 1124 GIEDLGRHRQALDWALIEFHKEKMNNINSLIREYWRMIYRGNDIDYIQIKTDDSPSDTAA 1183

Query: 1083 ---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
               ++Y+Y V+    ++ ++MRGRCSAGQ+VL SLIIR+ALAETF  NCG+LALDEPTTN
Sbjct: 1184 DRRKNYNYCVVQSKNNSVIDMRGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTN 1243

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N  SL  AL+RI+E R+ Q NF LI+ITHDE F   +G+      Y+RV ++    
Sbjct: 1244 LDRDNIMSLCDALNRIVESRQHQSNFMLIIITHDENFISSLGK---ITDYHRVYRNSECK 1300

Query: 1200 SIIE 1203
            S+I+
Sbjct: 1301 SVIQ 1304


>gi|198458384|ref|XP_001361018.2| GA19522 [Drosophila pseudoobscura pseudoobscura]
 gi|198136325|gb|EAL25594.2| GA19522 [Drosophila pseudoobscura pseudoobscura]
          Length = 1312

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/319 (37%), Positives = 183/319 (57%), Gaps = 33/319 (10%)

Query: 906  VELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV--LKIGGVSTFET 963
            V+L+       NQ  + R+++DN   ++ +    +     E+L +++  L +  VS  +T
Sbjct: 1009 VQLESVNTECLNQQTVERDLKDNRELKQLQDNETELRKTCENLAKKLGNLDLRNVSREKT 1068

Query: 964  ELGKH----LLERDRLLSEVNRCQGTMSVYQTNISRNKI-----DLKQAQYKDIDKRH-F 1013
            +L K      + +  LL ++   +  +   Q  I   +      + ++  Y+ +  RH  
Sbjct: 1069 DLTKRREAGTVRKGELLGQLGEIRSQVERLQREIDEPRFREAVKNFRKGNYEMVVTRHSI 1128

Query: 1014 DQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI 1073
            D L QL+              AL+ AL++FH  KME+IN++IRE W+  YRG DIDYI++
Sbjct: 1129 DDLAQLRF-------------ALEWALIQFHAEKMEKINRLIREYWRMIYRGNDIDYIQV 1175

Query: 1074 -----HSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNC 1128
                 ++D+     ++Y+Y+V+    + E+EMRGRCSAGQ+VLASLIIR+ALAETF  NC
Sbjct: 1176 KTDEVNTDASADRRKTYNYRVVQSKNNTEIEMRGRCSAGQRVLASLIIRMALAETFSSNC 1235

Query: 1129 GILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1188
            G+LALDEPTTNLD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+      
Sbjct: 1236 GVLALDEPTTNLDRINITSLCDALNCIVEERQTQSNFMLIIITHDENFISSLGK---ITS 1292

Query: 1189 YYRVAKDDHQHSIIEAQEI 1207
            Y+RV ++D   S+I   +I
Sbjct: 1293 YHRVFRNDECKSVIRKVQI 1311



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 21/213 (9%)

Query: 23  LSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 82
           LS R  D+D  +   MGVSKAI+ NV+F HQ++++WPL +   LK+KFD IF  T Y KA
Sbjct: 136 LSGRTVDIDLAISDFMGVSKAIINNVLFCHQEDSSWPLDEAKKLKEKFDAIFGITEYNKA 195

Query: 83  LEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSI 142
           L+ I K+ K+   E+K  +  ++++  LK         + + Q+K +++K Q  E E+ +
Sbjct: 196 LDKIIKMRKEAMDELKVMEAGMKHVAYLKQEMEVKTLGLQKAQKKCDSIKAQCSECEEEM 255

Query: 143 QDIDDKIHHTELTLKDLRKMQDQISTMTARR---STLFEQQQKQYAALAEEIE------- 192
           + I       E  L+++R ++ +I    A++    T  +  ++Q +AL+ +I+       
Sbjct: 256 KPI-------ECRLQEIRDIEYEIGKHQAQKVEMDTKHKNCKEQISALSSKIKTHFEGSL 308

Query: 193 -DTDEELKNWKNNFEGIVAKR---ESDISKLER 221
            D D E+ N+      +  KR   E  +SKL++
Sbjct: 309 VDLDLEIDNFHQRMSEMRLKRSETEEQLSKLKK 341


>gi|195154461|ref|XP_002018140.1| GL17546 [Drosophila persimilis]
 gi|194113936|gb|EDW35979.1| GL17546 [Drosophila persimilis]
          Length = 1312

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/324 (37%), Positives = 187/324 (57%), Gaps = 20/324 (6%)

Query: 891  ESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEE 950
            E+E+KS  ++ + +  E         NQ  + R+++DN   RE K   D      ++ E 
Sbjct: 1001 EAEIKSKTLQLESVNTE-------CLNQQTVERDLKDN---RELKQLQDNETELRKTCEN 1050

Query: 951  RVLKIGGVSTFETELGKHLLERDRLLSEVNRCQ--GTMSVYQTNISRNKIDLKQAQYKDI 1008
               K+G +        K  L + R    V + +  G +   ++ + R + ++ + ++++ 
Sbjct: 1051 LAKKLGNLDLRNVSREKMDLTKRREAGTVRKGELLGQLGEIRSQVERLQREIDEPRFREA 1110

Query: 1009 DKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1068
             K       ++  T  +  DL +   AL+ AL++FH  KME+IN++IRE W+  YRG DI
Sbjct: 1111 VKNFRKGNYEMVVTRHSIDDLAQLRFALEWALIQFHAEKMEKINRLIREYWRMIYRGNDI 1170

Query: 1069 DYIRI-----HSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAET 1123
            DYI++     ++D+     ++Y+Y+V+    + E+EMRGRCSAGQ+VLASLIIR+ALAET
Sbjct: 1171 DYIQVKTDEVNTDASADRRKTYNYRVVQSKNNTEIEMRGRCSAGQRVLASLIIRMALAET 1230

Query: 1124 FCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR 1183
            F  NCG+LALDEPTTNLD  N  SL  AL+ I+E+R+ Q NF LI+ITHDE F   +G+ 
Sbjct: 1231 FSSNCGVLALDEPTTNLDRINITSLCDALNCIVEERQTQSNFMLIIITHDENFISSLGK- 1289

Query: 1184 QHAEKYYRVAKDDHQHSIIEAQEI 1207
                 Y+RV ++D   S+I   +I
Sbjct: 1290 --ITSYHRVFRNDECKSVIRKVQI 1311


>gi|401826947|ref|XP_003887566.1| Rad50-like protein [Encephalitozoon hellem ATCC 50504]
 gi|392998572|gb|AFM98585.1| Rad50-like protein [Encephalitozoon hellem ATCC 50504]
          Length = 1249

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 93/193 (48%), Positives = 136/193 (70%), Gaps = 3/193 (1%)

Query: 1016 LIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHS 1075
             I+LK  E++  DLD+   ALD+A++ FHT K+EE+N  +++LW+ TY+G D+D+I I +
Sbjct: 1047 FIELKALELSCLDLDKCIQALDRAIIDFHTSKLEEVNATLKDLWESTYKGDDVDWIEIKT 1106

Query: 1076 DSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDE 1135
            +S   G ++Y+YKV+   G  EL+MRGR S+GQK++AS++IRLALA +F  NC ILALDE
Sbjct: 1107 ES--LGQKTYNYKVVFIKGGVELDMRGRSSSGQKMIASILIRLALANSFASNCNILALDE 1164

Query: 1136 PTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            PTTNLD  N ESLA  L R++   K   +FQLIVITHDE F QL+  R   E +Y++ ++
Sbjct: 1165 PTTNLDRDNIESLAFTLSRVISRHKENSDFQLIVITHDEDFVQLL-SRDGPEYFYKLNRN 1223

Query: 1196 DHQHSIIEAQEIF 1208
            ++  S+I    ++
Sbjct: 1224 ENGDSVIVRHSVY 1236


>gi|221058216|ref|XP_002261616.1| DNA repair protein RAD50 [Plasmodium knowlesi strain H]
 gi|194247621|emb|CAQ41021.1| DNA repair protein RAD50, putative [Plasmodium knowlesi strain H]
          Length = 1804

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 150/226 (66%), Gaps = 6/226 (2%)

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
            +G + + +  I++   ++    Y D+ K++ +++I++        D+  +YN+ D+A+++
Sbjct: 1574 KGKIELREEYINKLTTEMNSDTYDDVGKKYREKVIEIFVYRSVIGDICNFYNSFDQAIIK 1633

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGT----RSYSYKVLMQTGDA 1096
            FH++KM+EIN  IR LW++ Y   DIDYI I S+  +E  G     RSY+Y+V+M   + 
Sbjct: 1634 FHSLKMQEINLSIRNLWRRVYNSADIDYIYIKSEIQTENNGKVHQRRSYNYRVVMVKDNC 1693

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            EL+MRGRCS+GQKVL+S+IIRLALAE+F + CGILALDEPTTNLD  N+++LAA +  I+
Sbjct: 1694 ELDMRGRCSSGQKVLSSIIIRLALAESFSIRCGILALDEPTTNLDKSNSKNLAALIANIV 1753

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            + RK    FQLI+ITHD  F  ++ Q      +Y+V K+   +S I
Sbjct: 1754 DLRKESSAFQLILITHDTHFVDVLSQYGLTNCFYKVRKNRQGYSTI 1799



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 13/197 (6%)

Query: 21  VCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYT 80
           V ++ +C D++  +P LMGVSKA+LENVI  H +E+ WP  +   +KKKFD++F    ++
Sbjct: 133 VIITNKCLDINEHIPKLMGVSKALLENVILCHHEESLWPFSESVKIKKKFDELFGDDHFS 192

Query: 81  KALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEK 140
           K L+   K  K    E+K    K   L TLK+  Y  R++I+ D ++ E    +++E + 
Sbjct: 193 KILDEFTKCRKVMNDELKK---KEYELATLKE-CYDRRKNIALDIQRNE---QEIEECQT 245

Query: 141 SIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK------QYAALAEEIEDT 194
            IQ   DKI  + L L  L   +  +  +T+     F  Q K       Y ++ E  E+ 
Sbjct: 246 IIQLDKDKIEGSLLILNTLEGKKSLLRKLTSSIDMYFAVQGKFLDDLENYKSVEEIYEED 305

Query: 195 DEELKNWKNNFEGIVAK 211
             EL+++ + F+  +AK
Sbjct: 306 ASELEHFADLFQRDLAK 322


>gi|399216455|emb|CCF73143.1| unnamed protein product [Babesia microti strain RI]
          Length = 848

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 169/304 (55%), Gaps = 29/304 (9%)

Query: 915  VRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDR 974
            + N   I+R + DN+  +  + +  +   ++  L         V++ E+E+ K     + 
Sbjct: 554  IINDKTIKRVLVDNIKLKTLQQQNKRLQDDLMILS------SNVTSCESEMQKLTANMNL 607

Query: 975  LLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANK------- 1027
            L  E   C G++   +  I   ++ L+   YK+      D  IQL+T  +A K       
Sbjct: 608  LRHE---CMGSLKARRDMIKEIEMKLESPLYKNAKGNFMDAQIQLQTVILAEKVFHFIIQ 664

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYI---------RIHSDSE 1078
            DL  Y  +LD AL ++H  KMEEIN  I+ +WQ+ Y G DIDYI         R + +++
Sbjct: 665  DLAVYQKSLDLALTKYHYKKMEEINIAIKSIWQELYTGNDIDYIAGGETIDIVRFNEETD 724

Query: 1079 GAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1138
                +S+ Y+++M     EL+MRGRCSAGQ++LASL+IRLALAE FC NCGILALDEPTT
Sbjct: 725  ----KSFHYRIVMSINGTELDMRGRCSAGQRMLASLVIRLALAEIFCQNCGILALDEPTT 780

Query: 1139 NLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQ 1198
            NLD  + + L  +L R++ +RK    FQLI+ITHDE FA  +       +YY++ K D  
Sbjct: 781  NLDVSHVKGLGESLARLVNERKSLHGFQLILITHDEEFASKLALDCGCHRYYKIDKKDSG 840

Query: 1199 HSII 1202
             +I+
Sbjct: 841  SAIV 844



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 67/89 (75%), Gaps = 1/89 (1%)

Query: 5   AIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPS 64
           A+ESVLQ   P TGE+ C+S++C DMD  VP+L+G+SKA+L++VIF HQ+   WPL D +
Sbjct: 124 ALESVLQVKLP-TGEESCVSHKCVDMDIAVPSLIGLSKAVLDSVIFCHQENNTWPLSDNA 182

Query: 65  TLKKKFDDIFSATRYTKALEVIKKLHKDQ 93
           T+KK+FDD+F  +R+  ALE I K  K+Q
Sbjct: 183 TVKKRFDDLFQTSRFALALEAIGKARKEQ 211


>gi|389584754|dbj|GAB67486.1| DNA repair protein RAD50 [Plasmodium cynomolgi strain B]
          Length = 1784

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/226 (43%), Positives = 150/226 (66%), Gaps = 7/226 (3%)

Query: 983  QGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMR 1042
            +G + + +  I +   ++    Y DI+K +  ++I++   +   KD+  +YN+ D+A+++
Sbjct: 1555 KGKIELRKEYIDKLTTEMNSDTYVDIEK-NIKKIIEIFVYKNVIKDICNFYNSFDQAIIK 1613

Query: 1043 FHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGT----RSYSYKVLMQTGDA 1096
            FH++KM+EIN  IR LW++ Y   DIDYI I S+  +E  G     RSY+Y+V+M   + 
Sbjct: 1614 FHSLKMQEINLSIRNLWRRVYNSADIDYIYIKSEVQTENNGKVNQRRSYNYRVVMVKDNC 1673

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            EL+M+GRCS+GQKVL+S+IIRLALAE+F + CGILALDEPTTNLD  N+++LA+ +  I+
Sbjct: 1674 ELDMKGRCSSGQKVLSSIIIRLALAESFSIKCGILALDEPTTNLDKSNSKNLASLIANIV 1733

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            + RK    FQLI+ITHD  F  ++ Q      +YRV K+   +S I
Sbjct: 1734 DLRKDSSAFQLILITHDTHFVDVLSQYGLTNCFYRVRKNQRGYSTI 1779



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 13/208 (6%)

Query: 21  VCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYT 80
           V ++ +C D++  +P LMGVSKA+LENVI  H +E+ WP  +   +KKKFD++F    ++
Sbjct: 134 VIITNKCIDINEHIPKLMGVSKALLENVILCHHEESLWPFSESVKIKKKFDELFGDDHFS 193

Query: 81  KALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEK 140
           K L+   K  K     +K  + +L  L+   D   K+   I +++++    +  MQ L+K
Sbjct: 194 KILDEFTKCRKTINDVLKRKEYELATLKECYDKKKKIALDIQRNEQEIGECQTIMQ-LDK 252

Query: 141 SIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK------QYAALAEEIEDT 194
                 ++I  + L L  L K +  +  +T+     F   +K       Y  + E  E+ 
Sbjct: 253 ------EEIEESFLILNTLEKKKSSLGKITSSIDMYFAIHEKFQDDLQNYKTVKEIYEED 306

Query: 195 DEELKNWKNNFEGIVAKRESDISKLERE 222
             EL+++   F+  +AK  S I ++  E
Sbjct: 307 ASELEHFAQLFQEDLAKCNSLIEQVSNE 334


>gi|67474252|ref|XP_652875.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469773|gb|EAL47489.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
 gi|449709485|gb|EMD48743.1| DNA double strand break repair Rad50 ATPase, putative [Entamoeba
            histolytica KU27]
          Length = 1241

 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 191/353 (54%), Gaps = 51/353 (14%)

Query: 854  FQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKD 913
             +QEIE+L + +  +++  + +K  + KE +E K   E+  K C          LD  ++
Sbjct: 927  IEQEIEILRQTSGDVQDKINTKK-LKIKEYEEDKKYIET--KEC----------LDSIQN 973

Query: 914  IVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERD 973
            +V           ++ NY+E + K+++   EI+S E                      RD
Sbjct: 974  VV-----------ESPNYKECEEKIEQTKKEIKSCENI--------------------RD 1002

Query: 974  RLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN-KDLDRY 1032
            +L++EV+  +G + +   NI R+K D+ +       +  +D+L   +  E    +DLD+Y
Sbjct: 1003 KLMNEVSEIEGELKILTNNILRHKEDINRLNPNGKLETEYDELSIRRIVEKNTIEDLDKY 1062

Query: 1033 YNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI---HSDSEGAGTRSYSYKV 1089
              A+ +A+ ++H  KM+EIN II +LW   Y  QDI  ++I     + EGA T +Y+Y+V
Sbjct: 1063 KGAVGRAMTKYHREKMKEINDIINDLWSGVYAAQDIQTVKIVAEDPNQEGART-TYNYRV 1121

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
             M      +EMRGRCS GQK LAS+IIR+ALA+TFC  C +LALDEPT NLD  N  SLA
Sbjct: 1122 DMVKDGIPMEMRGRCSMGQKALASVIIRIALAKTFCSKCSVLALDEPTINLDEENCTSLA 1181

Query: 1150 AALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              L  ++E +    NFQ+I+ITHDE F + +      E++YR+ +D+   S +
Sbjct: 1182 QQLCSLLESQGKLSNFQIILITHDENFVKKLS--NFNEEFYRIERDNENCSCV 1232


>gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1785

 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 129/182 (70%), Gaps = 6/182 (3%)

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGT-- 1082
            KD+  +YN+ D+A+++FH++KM+EIN  IR LW++ Y   DIDYI I S+  +E  G   
Sbjct: 1599 KDICNFYNSFDQAIIKFHSLKMQEINLSIRNLWRRVYNSADIDYIYIKSEAQTESNGKVQ 1658

Query: 1083 --RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
              RSY+Y+V+M   + EL+M+GRCS+GQKVL+S+IIRLALAE+F + CGILALDEPTTNL
Sbjct: 1659 QRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRLALAESFSIKCGILALDEPTTNL 1718

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            D  N+++LA+ +  I++ RK    FQLI+ITHD  F  ++ Q      +Y+V KD   +S
Sbjct: 1719 DKSNSKNLASLIANIVDLRKDSSAFQLILITHDTHFVDVLSQYGLTNCFYKVRKDRRGYS 1778

Query: 1201 II 1202
             I
Sbjct: 1779 TI 1780



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 13/210 (6%)

Query: 19  EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATR 78
           E V ++ +C D++  +P LMGVSKA+LENVI  H +E+ WP  +   +KKKFD++F    
Sbjct: 131 EDVIITNKCLDINEHIPKLMGVSKALLENVILCHHEESLWPFSESLKIKKKFDELFGDDH 190

Query: 79  YTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQEL 138
           ++K L+   K  K     +K  + +L  L+      Y  +++I+ +  + E    ++ E 
Sbjct: 191 FSKILDEFTKCRKTMNDVLKRKEYELATLR----ECYGKKKNIALEIRRNE---QEIGEC 243

Query: 139 EKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQK------QYAALAEEIE 192
           +  +Q   ++I  + L L  L K +  +  +T+     F   +K       Y AL E  E
Sbjct: 244 QTVMQLDVEQIEESVLILDTLEKKRSLLGKLTSSIDMFFAIHEKFQDDLQNYKALKEIYE 303

Query: 193 DTDEELKNWKNNFEGIVAKRESDISKLERE 222
           +   EL+++   F+  +AK  S I ++  E
Sbjct: 304 EDVSELEDFARLFQMDLAKCNSLIEQVSNE 333


>gi|300708743|ref|XP_002996545.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01]
 gi|239605855|gb|EEQ82874.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01]
          Length = 1147

 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 180/306 (58%), Gaps = 20/306 (6%)

Query: 910  RFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERV-----LKIGG------- 957
            R KD + N+ QI  ++ ++L Y ++  K  K  +EI+ LEE +     L I         
Sbjct: 844  RLKDELNNKKQILSSVNEHLTYYKSLNKFKKIENEIKLLEETLKSKFNLDINTSSNVVLE 903

Query: 958  -VSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQL 1016
             +++ E+++     + D+LL   N  +G +S  +  I   +++L Q +YKD+   +  + 
Sbjct: 904  YLTSLESKIKTMKTKYDKLLENKNILKGEISQLRNQIKSYEVEL-QTEYKDVVHIYNKKY 962

Query: 1017 IQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD 1076
            ++ K  E++  D+D+    LDK+++ +H  K+EEIN  ++ELW   Y+G DIDYI++  +
Sbjct: 963  VENKIIELSCNDIDKCITVLDKSIIDYHYNKIEEINLNLKELWSNCYKGNDIDYIKLIIN 1022

Query: 1077 SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP 1136
              G+  ++YSYK+++   + EL+MR R SAGQK++ ++++R+AL+  FC N  +L LDEP
Sbjct: 1023 ENGS--KNYSYKMMIVKNNIELDMRNRSSAGQKMIGNILLRMALSRVFCCNFNVLTLDEP 1080

Query: 1137 TTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            TTNLD  N ESLA  L  I    K   N QLI+ITHDE F  ++  R+    YYR+ ++ 
Sbjct: 1081 TTNLDKENVESLAYTLVNIT---KTNPNLQLIIITHDEDFLSIMC-RESLSFYYRLTRNV 1136

Query: 1197 HQHSII 1202
            +  S+I
Sbjct: 1137 NGDSVI 1142



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 74/119 (62%), Gaps = 1/119 (0%)

Query: 27  CADMDRE-VPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEV 85
           C  ++++ + +++ ++ +ILEN+IF HQ++  W L +P+T+KKKFD+IFS+TRY+K LE 
Sbjct: 136 CGKINKDDLSSILEINTSILENIIFCHQEDTMWYLAEPATIKKKFDEIFSSTRYSKILEN 195

Query: 86  IKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQD 144
           +KK  K+ A + K    ++  L   +D  +++    +  +E  E     +  LEK+ +D
Sbjct: 196 LKKAKKEIATKSKVIDTEMSYLLKARDKKFEIENKCATLKEDLEKKICNISALEKNEKD 254


>gi|156089429|ref|XP_001612121.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154799375|gb|EDO08553.1| conserved hypothetical protein [Babesia bovis]
          Length = 1121

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 181/301 (60%), Gaps = 14/301 (4%)

Query: 913  DIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETE--LGKHLL 970
            D + +Q Q  + +E+N+ Y   K K+ +       L     K+G  S  E +  + +  +
Sbjct: 818  DTINDQKQWLQRLEENITY---KTKMRELEDAKHYLNALRCKLGPRSEDEIQALIKETNI 874

Query: 971  ERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLD 1030
            +  ++  E+   +G+++  +  + + +  L+   YK++ + + + ++ +K+  MA +DL+
Sbjct: 875  KCGKVSVEIATLRGSLNTREETVQKLQQMLESDTYKNVHQDYAEIMLAVKSHSMAFEDLN 934

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD------SEGAGTRS 1084
             Y   L+  L ++H+ K+E+IN +++ +W++ Y G ++DYI I S+      + G   RS
Sbjct: 935  LYTKTLEIKLHQYHSEKIEQINTVLKRVWREVYTGTNVDYIEIQSNIDTVVATTGLAPRS 994

Query: 1085 YSYKVLMQTGDA-ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
            Y+Y+++M   +  E++MRGRCSAG++VLASLI+R+ L E FC NC ILALDEPTTNLD  
Sbjct: 995  YNYRMVMVNHNGVEMDMRGRCSAGERVLASLILRITLTEAFCYNCNILALDEPTTNLDKE 1054

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIE 1203
            N  SL  +L +++ D     +FQLI+ITHDE FA+ +  R +  KY+R+ K+    ++IE
Sbjct: 1055 NIASLETSLAKLVND--CSIDFQLILITHDEGFARKMALRCNCNKYFRLTKNTENDTVIE 1112

Query: 1204 A 1204
            A
Sbjct: 1113 A 1113



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 17/252 (6%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +K  ES ++ I P   E   L  + +D+D  +P++MG+S+A++++V+  HQDE+NW L D
Sbjct: 113 FKTGESKMRVIGPDEVES-NLGMKMSDIDTSLPSMMGLSRALIDSVVVCHQDESNWALDD 171

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLE-------NLQTLKDAAY 115
            S  K KFDD+   +RYTKAL  ++K  K+Q + IK   +KLE        +  LK+   
Sbjct: 172 LSKFKSKFDDLLETSRYTKALTALQKEKKEQNEAIKREMIKLEYAKAQITQVAELKNQFK 231

Query: 116 KLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRST 175
              ++I Q +E+   L+++++++ ++ Q +  +  H      ++R  ++ I     R S 
Sbjct: 232 SNADNIEQSKERLALLESELKQINETAQMLRKEYEHAAAVCTEIRHTKEAIE----RLSN 287

Query: 176 LFEQQQKQYAALAEE-IEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLE 234
                Q+    + EE ++D     +   +  EG      +   +++R    MD     L 
Sbjct: 288 DIHIMQQNIGEIYEESLDDMTLFFEKVSHELEGYHGTYNTITLEIDRLMEHMDG----LH 343

Query: 235 QNIDAYTAEITN 246
           Q+I+    +ITN
Sbjct: 344 QHINVTNDKITN 355


>gi|407042503|gb|EKE41365.1| RecF/RecN/SMC N terminal domain containing protein [Entamoeba
            nuttalli P19]
          Length = 1241

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 144/235 (61%), Gaps = 7/235 (2%)

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN-KDLD 1030
            RD+L++EV+  +G + +   NI R+K D+ +       +  +D+L   +  E    +DLD
Sbjct: 1001 RDKLMNEVSEIEGELKILTDNILRHKEDINRLNPNGKLETEYDELSIRRIVEKNTIEDLD 1060

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI---HSDSEGAGTRSYSY 1087
            +Y  A+ +A+ ++H  KM+EIN II +LW   Y  QDI  ++I     + EGA T +Y+Y
Sbjct: 1061 KYKGAVGRAMTKYHREKMKEINDIINDLWSGVYAAQDIQTVKIVAEDPNQEGART-TYNY 1119

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            +V M      +EMRGRCS GQK LAS+IIR+ALA+TFC  C +LALDEPT NLD  N  S
Sbjct: 1120 RVDMVKDGIPMEMRGRCSMGQKALASVIIRIALAKTFCSKCSVLALDEPTINLDEENCTS 1179

Query: 1148 LAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
            LA  L  ++E +    NFQ+I+ITHDE F + +      E++YR+ +D+   S +
Sbjct: 1180 LAQQLCSLLESQGKLSNFQIILITHDENFVKKLS--NFNEEFYRIERDNENCSCV 1232


>gi|440796517|gb|ELR17626.1| rad50 subfamily protein [Acanthamoeba castellanii str. Neff]
          Length = 1320

 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 168/303 (55%), Gaps = 16/303 (5%)

Query: 4   KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
           K +ES LQT N   GEKV  S+RCAD+DRE+P L+GVS+ ILENVIF HQ+E+NWPL + 
Sbjct: 112 KTLESALQTYNA-AGEKVSQSFRCADLDREIPELVGVSRPILENVIFCHQEESNWPLSET 170

Query: 64  STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQ 123
           S LKKKFD+IF+ATRYTKALE IKK  K+QAQ+IK  KL+LENLQ  KD A++++  +  
Sbjct: 171 SVLKKKFDEIFAATRYTKALEAIKKHRKEQAQQIKECKLRLENLQNQKDHAHQIQRELKS 230

Query: 124 DQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQ 183
             E       +M  L++ I + +  +   +     +  +  +I  + A R  +  + QK 
Sbjct: 231 KLEFQAKANEEMAALQREIDEQEKLLTELKRKFNSINTLMTEIKQLKAVRQQMVNENQKT 290

Query: 184 YAALAEEIEDTDEELKNWKNNF-EGIVAKR------ESDISKLEREKNDMDTKIKFLEQN 236
           YA L +E E++DEEL +   +F E + ++R      E  + KL R KN  D  +  + + 
Sbjct: 291 YAELKQEFEESDEELLSLAASFNEEMESRRQAENALEGKLEKLHRSKNQHDAALFSINEQ 350

Query: 237 IDAYTAEI--------TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAAL 288
           + +  + I         +  S      + + ERDS I +    + L      P+S     
Sbjct: 351 MSSIKSAIEARSPCRSYDTRSSGPRRKTILAERDSLILEFIDYYGLQDFDKPPYSEAKMT 410

Query: 289 NFI 291
            F+
Sbjct: 411 KFL 413


>gi|164663069|ref|XP_001732656.1| hypothetical protein MGL_0431 [Malassezia globosa CBS 7966]
 gi|159106559|gb|EDP45442.1| hypothetical protein MGL_0431 [Malassezia globosa CBS 7966]
          Length = 1164

 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/236 (41%), Positives = 143/236 (60%), Gaps = 12/236 (5%)

Query: 924  NIEDNLNYRETKAKVDKFASEIESLEERVLKIG---GVSTFETELGKHLLERDRLLSEVN 980
            N++DN+ YR+   +++   +E+  L+     +      S ++        E + L     
Sbjct: 930  NLQDNMRYRQVLRELEHVTAELNKLDLEAAHMRHKRASSAYDAARR----EENELSGRAA 985

Query: 981  RCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKAL 1040
              +G +   +  + R + +L+   YKDI  R+  QL+ +K   MAN DLD Y  AL +A+
Sbjct: 986  HIRGEIQGIEAELQRREAELRH-DYKDISNRYMRQLVHIKVAGMANHDLDIYCGALQQAI 1044

Query: 1041 MRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA----GTRSYSYKVLMQTGDA 1096
            +++H +KMEE+N+ +  LW++TY+G DID I I SD+EG     G RSY Y+V M     
Sbjct: 1045 LQYHAIKMEEVNQTLDYLWKKTYQGTDIDSISIRSDTEGRVSANGLRSYQYRVCMVKDAV 1104

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
            EL+MRGRCSAGQKVLA ++IRLALA++F  +CG +ALDEPT NLD  N E LAA+L
Sbjct: 1105 ELDMRGRCSAGQKVLACILIRLALADSFGGSCGFMALDEPTANLDRENVEGLAASL 1160


>gi|391340299|ref|XP_003744480.1| PREDICTED: DNA repair protein RAD50-like [Metaseiulus occidentalis]
          Length = 1261

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 15/211 (7%)

Query: 1004 QYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTY 1063
            Q++  +K + + L    T +  ++DLD  Y AL+KA++ FH  KM  IN+IIRE W + Y
Sbjct: 1045 QFESAEKEYKEWLTNSLTEKQISRDLDVGYTALNKAILAFHQEKMNLINRIIREYWVRVY 1104

Query: 1064 RGQDIDYIRIHSDSEGAGT-----RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRL 1118
            +G DID I+I  + +   +     RSY Y+V+M     + +MR RCSAGQ+VLA +I+RL
Sbjct: 1105 KGNDIDQIQIEFNEDTGASKTSTKRSYQYRVVMVRQGVKQDMRARCSAGQRVLACIIVRL 1164

Query: 1119 ALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA- 1177
            ALAE FC  C +LALDEPTTNLD  N +SLA  L  I+ +RK ++NFQ++VITHDE F  
Sbjct: 1165 ALAEAFCDGCAMLALDEPTTNLDFDNMKSLAEILADIVRNRKTEKNFQMVVITHDETFIL 1224

Query: 1178 ------QLIGQRQHAEKYYRVAKDDHQHSII 1202
                  + IG+ +H   Y+ V K+D   S+I
Sbjct: 1225 ALSKHLEDIGEVKH---YFEVKKNDDNMSVI 1252


>gi|255071309|ref|XP_002507736.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299]
 gi|226523011|gb|ACO68994.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299]
          Length = 1319

 Score =  183 bits (464), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 152/231 (65%), Gaps = 1/231 (0%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E K ++ V+QTI+  TGEKV +S +CAD++  VP +MGVSKAILENV+FVHQ+++NWPL
Sbjct: 109 LEKKDLDQVIQTIDEKTGEKVSVSRKCADINATVPDMMGVSKAILENVVFVHQEDSNWPL 168

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            + +TLKKKFD+IFSAT+YTKALE I +L K+QA  IK +KL++ENL+  KD A KL++ 
Sbjct: 169 GEAATLKKKFDEIFSATKYTKALEHIGRLRKEQAAAIKEHKLRVENLRLQKDHASKLKDR 228

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
               ++K  AL ++M+EL+  I + +  +      + +LR + ++I  + ARR  +  + 
Sbjct: 229 HDDARDKATALGSRMKELQGKIDECNSAVTAAGGDIHELRSLSEKIGQLEARREAIVTEN 288

Query: 181 QKQYAALAE-EIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKI 230
            +++A L   E+ D  E L+    +F   V+  +  + + ER+  D+  +I
Sbjct: 289 SRKHANLGTYEMTDPTEVLEKSAEDFAAQVSSLKRLLEECERKSGDLGLEI 339


>gi|324501252|gb|ADY40559.1| DNA repair protein rad-50 [Ascaris suum]
          Length = 1292

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 184/651 (28%), Positives = 318/651 (48%), Gaps = 56/651 (8%)

Query: 569  DGMRQMFDPFERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSLESSN 627
            DG R +++ +E   R  + CP C+R + S +E  +   K   K A   + ++ L      
Sbjct: 653  DGCRYLYEKWEEEVRKTNCCPLCDRKYGSTQEASQLATKVNRKRAELPDEIERLQ---RR 709

Query: 628  ADSYFQQLDKLRMVYEEYVKLSKET----------IPVAEKNLHELTEELDQKSQAFDDV 677
               Y +  ++L  V   YVK+ K              VAEK LH + EE+     A +D 
Sbjct: 710  VREYEETQNELMEVVP-YVKIVKRLSQDKEELESDFKVAEKKLHTIGEEV---INARNDR 765

Query: 678  LGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYMLD-SRGQGVRTMEEIQ 736
               L +    KE+   +       D+ +  +   Q+++  L+  +D   G   R++ E++
Sbjct: 766  EKTLKK----KEAFRSVQADASLMDKTWNTLSEKQREIKRLKAEVDVCDGVERRSLAELR 821

Query: 737  LELSGSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEE 796
             EL       ++L   +    DE +   ++ +N+  + + LRE +V+    L +  +  +
Sbjct: 822  AELEQYQHNYNDLIASI----DEAQASISERNNLIEKLNVLRERRVE----LMEKSRQHD 873

Query: 797  ELEHLMEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQK----- 851
             L   ++EK Q +LDE+ +      L +   KL     +L+ KL      Q + K     
Sbjct: 874  RLIESLKEK-QNNLDERRI-----NLKELNTKLPIVEAELQAKLAERETTQTKGKGEESR 927

Query: 852  -INFQQEIEMLLKIASKIKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDR 910
             +  ++ I+ +      I++  +  K +   EL+ K+ +  SE+KS  +  DE +  L+ 
Sbjct: 928  LVEIRRAIDAVRAQIGSIEKRMEGSKGD-VTELKMKEGRL-SELKSKIVVVDEKIRSLNG 985

Query: 911  FKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLL 970
              D V  + + +R +++ L   E  A++      +E L     +  G    E    +  L
Sbjct: 986  DFDNVNTKQERKRRLDEQLKKLELAARIKSLNENLEQL-----RWDGKPVVELLKEEQRL 1040

Query: 971  ER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKD 1028
            +R  +    E+ R +G M   +  I+  K  L    +   ++    ++I    TE   +D
Sbjct: 1041 QRACNETSLEMERTRGEMGQQKKRITEMKEKLNSRDFLKSEEDFKKEVITKCVTEKVIED 1100

Query: 1029 LDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDS--EGAGTRSYS 1086
            L+ Y  A+D++++ FH  KMEEIN+++  LW++ YRG D++ ++I S+S  E    +SY+
Sbjct: 1101 LEIYIRAMDESIVEFHAKKMEEINEVLASLWEKVYRGCDVEKVQIKSESVDETERRKSYN 1160

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V+M     E++M GRCSAGQK+LAS++IR+AL++ FC  C I+ALDEPTTNLD    E
Sbjct: 1161 YRVVMFMDGKEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEPTTNLDVLKVE 1220

Query: 1147 SLAAALHRIMEDR--KGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +L   L  ++E+R    Q+ FQLIVITHD RF + + Q    E  Y + KD
Sbjct: 1221 NLGDMLAEVIEERSVSSQKAFQLIVITHDYRFVEHLRQLCRPEWVYSLTKD 1271


>gi|387596186|gb|EIJ93808.1| hypothetical protein NEPG_01380 [Nematocida parisii ERTm1]
          Length = 1278

 Score =  177 bits (448), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 10/181 (5%)

Query: 1017 IQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI--H 1074
            I +K  + +  DL++Y   +  A++R+H+ K+ E+N II+E+W   Y+G DID I+I  H
Sbjct: 1091 IMIKVLKESISDLEKYIKGVQAAIVRYHSEKLAEVNAIIKEIWGLAYKGTDIDEIKIVSH 1150

Query: 1075 SDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD 1134
             D         SY ++M     E++MRGR SAGQKVLAS++IRLALAE F LNCG L+LD
Sbjct: 1151 LDK--------SYSLVMVKNGIEIDMRGRVSAGQKVLASIVIRLALAEAFSLNCGFLSLD 1202

Query: 1135 EPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            EPTTNLD  N   LA AL  I++ RK +  FQL+VITHDE F + +   +  E +YR+ +
Sbjct: 1203 EPTTNLDSANISGLAKALSSIIQARKAEGGFQLLVITHDEDFVRELLATECTEYFYRLER 1262

Query: 1195 D 1195
            D
Sbjct: 1263 D 1263


>gi|340500394|gb|EGR27278.1| rad50, putative [Ichthyophthirius multifiliis]
          Length = 285

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 130/200 (65%), Gaps = 9/200 (4%)

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            K I + +  +LI+L        D+D Y + L+K L+ +H  KM +INK I   W++ Y+G
Sbjct: 66   KIIQQDYSQKLIELDIKNGLCNDIDVYIDELEKTLINYHKEKMLQINKTIISTWRKIYQG 125

Query: 1066 QDIDYIRIHSDSEG---AGTRSYSYKVLM------QTGDAELEMRGRCSAGQKVLASLII 1116
             DI  I I ++  G   AG +S++Y+++M      Q    E++M+GRCS+GQKVLA +II
Sbjct: 126  NDISKIEIKAEEVGENQAGRKSFNYRIVMYIIGKNQDDLKEIDMKGRCSSGQKVLACIII 185

Query: 1117 RLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERF 1176
            RLALAE F +NCGILALDEPTTNLD  +   LA +L  ++E RKGQE+FQLI+I+HD  F
Sbjct: 186  RLALAEAFTINCGILALDEPTTNLDQEHTIKLAQSLSDLIESRKGQESFQLIIISHDNNF 245

Query: 1177 AQLIGQRQHAEKYYRVAKDD 1196
             +L+ Q     +YY V K++
Sbjct: 246  IKLMQQNTECSEYYYVYKEN 265


>gi|429964893|gb|ELA46891.1| hypothetical protein VCUG_01589 [Vavraia culicis 'floridensis']
          Length = 1215

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 8/182 (4%)

Query: 1027 KDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYS 1086
            KDLD+   A++K++++++  K+EE+N+ ++ LW  TYRG DID I + ++     +  YS
Sbjct: 1042 KDLDKSIKAIEKSVLKYYENKIEELNRNLKYLWSNTYRGNDIDRIELKAE---ITSSKYS 1098

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            YK++M   D ELEMRGRCSAGQKV+ASLI RLAL+ TF  NC +L LDEPTTNLD  N E
Sbjct: 1099 YKLVMYKNDVELEMRGRCSAGQKVIASLIFRLALSITFSCNCNMLTLDEPTTNLDQSNIE 1158

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQE 1206
            SLA  L  +    +   N QLI+ITHDE F  L+  +   E +Y+V ++    S+IE   
Sbjct: 1159 SLARTLKYL----ERMSNLQLIIITHDEEFLNLVS-KDSVEYFYKVTRNSSCESVIERHS 1213

Query: 1207 IF 1208
            ++
Sbjct: 1214 VY 1215



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 98/174 (56%), Gaps = 9/174 (5%)

Query: 23  LSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 82
           LS + AD+D+++  ++  +K +L++VIF HQ+E+ WPL +P+  KKK DDIF +T Y KA
Sbjct: 161 LSGKAADIDKQMLMVLNTNKPLLDHVIFCHQEESTWPLSEPANFKKKMDDIFCSTVYIKA 220

Query: 83  LEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQ---MQELE 139
           +E +K + K++  ++   K+KL+ L     A  K  E +++ +   E L N    +  LE
Sbjct: 221 IENLKNVRKEKGMQL---KMKLQELNFALQAKKKREELLARLERANEDLMNNRGTISNLE 277

Query: 140 KSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIED 193
             ++ +++K    +  ++++R   +++  +  R   L     K    +A+E+ D
Sbjct: 278 GKLRVLNEKRSAQQRIMEEIRAQSEKLLVLDVR---LRNTSTKSMEIIADEVVD 328


>gi|402591654|gb|EJW85583.1| hypothetical protein WUBG_03505 [Wuchereria bancrofti]
          Length = 257

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 120/179 (67%), Gaps = 4/179 (2%)

Query: 1022 TEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG 1081
            + ++++DL  Y  A+D+++++FH  KMEEIN+++  LW+Q Y G DI+ I+I S+S G  
Sbjct: 59   SSLSHQDLANYIRAVDESVVKFHAQKMEEINEVLSSLWEQVYHGNDIETIQIKSESAGEN 118

Query: 1082 --TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
               +SY+Y+V+M  G  E++M GRCSAGQK+LAS++IR+AL++ FC  C I+ALDEPT N
Sbjct: 119  EKKKSYNYRVVMHVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEPTAN 178

Query: 1140 LDGPNAESLAAALHRIMEDRKGQEN--FQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            LD    ++L   L  I+  R       FQLIVITHD RF + + Q    E  Y V+KDD
Sbjct: 179  LDVLKVKNLGDMLADIISARCANNAKMFQLIVITHDNRFVEHLRQLCRPEWVYSVSKDD 237


>gi|170594123|ref|XP_001901813.1| rad50 family protein [Brugia malayi]
 gi|158590757|gb|EDP29372.1| rad50 family protein [Brugia malayi]
          Length = 1329

 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/173 (47%), Positives = 116/173 (67%), Gaps = 4/173 (2%)

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG--TRSY 1085
            DL  Y  A+D+++++FH  KMEEIN+++  LW+Q Y G DI+ I+I S+S G     +SY
Sbjct: 1137 DLANYIRAVDESVVKFHAQKMEEINEVLSSLWEQVYHGNDIETIQIKSESAGENEKKKSY 1196

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+M  G  E++M GRCSAGQK+LAS++IR+AL++ FC  C I+ALDEPT NLD    
Sbjct: 1197 NYRVVMYVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEPTANLDVLKV 1256

Query: 1146 ESLAAALHRIMEDRKGQ--ENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            ++L   L  I+  R     + FQLI+ITHD RF + + Q    E  Y V+KDD
Sbjct: 1257 KNLGDMLADIISARCANNAKMFQLIIITHDNRFVEHLRQLCRPEWVYSVSKDD 1309


>gi|324501531|gb|ADY40679.1| DNA repair protein rad-50 [Ascaris suum]
          Length = 887

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 174/310 (56%), Gaps = 11/310 (3%)

Query: 892  SEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEIESLEER 951
            SE+KS  +  DE +  L+   D V  + + +R +++ L   E  A++      +E L   
Sbjct: 562  SELKSKIVVVDEKIRSLNGDFDNVNTKQERKRRLDEQLKKLELAARIKSLNENLEQL--- 618

Query: 952  VLKIGGVSTFETELGKHLLER--DRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDID 1009
              +  G    E    +  L+R  +    E+ R +G M   +  I+  K  L    +   +
Sbjct: 619  --RWDGKPVVELLKEEQRLQRACNETSLEMERTRGEMGQQKKRITEMKEKLNSRDFLKSE 676

Query: 1010 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1069
            +    ++I    TE   +DL+ Y  A+D++++ FH  KMEEIN+++  LW++ YRG D++
Sbjct: 677  EDFKKEVITKCVTEKVIEDLEIYIRAMDESIVEFHAKKMEEINEVLASLWEKVYRGCDVE 736

Query: 1070 YIRIHSDS--EGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1127
             ++I S+S  E    +SY+Y+V+M     E++M GRCSAGQK+LAS++IR+AL++ FC  
Sbjct: 737  KVQIKSESVDETERRKSYNYRVVMFMDGKEIDMPGRCSAGQKMLASILIRIALSDVFCDK 796

Query: 1128 CGILALDEPTTNLDGPNAESLAAALHRIMEDR--KGQENFQLIVITHDERFAQLIGQRQH 1185
            C I+ALDEPTTNLD    E+L   L  ++E+R    Q+ FQLIVITHD RF + + Q   
Sbjct: 797  CSIIALDEPTTNLDVLKVENLGDMLAEVIEERSVSSQKAFQLIVITHDYRFVEHLRQLCR 856

Query: 1186 AEKYYRVAKD 1195
             E  Y + KD
Sbjct: 857  PEWVYSLTKD 866


>gi|378755672|gb|EHY65698.1| hypothetical protein NERG_01305 [Nematocida sp. 1 ERTm2]
          Length = 1278

 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 12/233 (5%)

Query: 979  VNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDK 1038
            ++ C G +   +     ++ D+K  +  + D+      I +K  + +  DL++Y  ++  
Sbjct: 1055 ISECAGEVYNLEKQKEEDEADIKVHESAESDE--LSAFIMIKVLKESISDLEKYIQSVQA 1112

Query: 1039 ALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRI--HSDSEGAGTRSYSYKVLMQTGDA 1096
            A++R+H  K+ E+N II+E+W   Y+G DID I+I  H D         +Y ++M    +
Sbjct: 1113 AIVRYHAEKLAEVNAIIKEIWCIAYKGTDIDEIKIISHMDK--------TYSLVMVKNGS 1164

Query: 1097 ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIM 1156
            E++MRGR SAGQKV+AS++IRLALAE F +NCG L LDEPTTNLD  N   LA AL  I+
Sbjct: 1165 EIDMRGRVSAGQKVIASIVIRLALAEAFSVNCGFLTLDEPTTNLDKENIAGLAKALSSII 1224

Query: 1157 EDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
            + RK + NFQL+VITHDE F + +   +  E +YR+ +D      I    I+D
Sbjct: 1225 QARKAEGNFQLLVITHDEDFVRELLSTECTEYFYRLERDTIGTPRIVQLSIYD 1277



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 2/107 (1%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E K  ESVL  +   TG+++ +  + +++D EVP LMG +  +LENVIFVHQ+E+ WP  
Sbjct: 107 ETKTTESVLWKVE-RTGKRM-ICNKLSEVDLEVPILMGTTGPVLENVIFVHQEESAWPFS 164

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ 108
           DPS +KKK D IFS++R+ KA++ +  L K+++ ++K  + K E LQ
Sbjct: 165 DPSAVKKKIDGIFSSSRFVKAIDALVSLKKEKSGDLKILECKYEGLQ 211


>gi|440492136|gb|ELQ74730.1| DNA repair protein RAD50, ABC-type ATPase/SMC superfamily, partial
            [Trachipleistophora hominis]
          Length = 499

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 123/189 (65%), Gaps = 8/189 (4%)

Query: 1020 KTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEG 1079
            K  ++  KDLD+   A++K++++++  K+EE+N+ ++ LW  TY+G DID I + ++   
Sbjct: 319  KILDVVLKDLDKSIKAIEKSVLKYYENKIEELNRNLKYLWSNTYKGNDIDKIELKAEITN 378

Query: 1080 AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTN 1139
            +    YSYK++M   D ELEMRGRCSAGQKV+ASLI RLAL+ TF  NC +L LDEPTTN
Sbjct: 379  S---KYSYKLMMYKNDVELEMRGRCSAGQKVIASLIFRLALSITFSGNCNVLTLDEPTTN 435

Query: 1140 LDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQH 1199
            LD  N ESLA  L  +    +   N QL++ITHDE F  L+  +   E +Y+V ++    
Sbjct: 436  LDQCNIESLARTLKYL----ERMSNLQLVIITHDEEFLNLVS-KDSVEYFYKVRRNSSCE 490

Query: 1200 SIIEAQEIF 1208
            S+IE   ++
Sbjct: 491  SVIERHSVY 499


>gi|312069949|ref|XP_003137920.1| rad50 family protein [Loa loa]
          Length = 1364

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/173 (49%), Positives = 115/173 (66%), Gaps = 6/173 (3%)

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG--TRSY 1085
            DL  Y  A+DK+++ FHT KMEEIN+++  LW+Q Y G DI+ I+I S+S G     +SY
Sbjct: 1174 DLANYIRAVDKSVVEFHTQKMEEINEVLSSLWEQVYHGNDIEAIQIKSESAGENEKKKSY 1233

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+M  G  E++M GRCSAGQK+LAS++IR+AL++ FC  C I+ALDEPT NLD    
Sbjct: 1234 NYRVVMYVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEPTANLDV--L 1291

Query: 1146 ESLAAALHRIMEDRKGQEN--FQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            ++L   L  I+  R       FQLIVITHD RF + + Q    E  Y V+KDD
Sbjct: 1292 KNLGDMLADIISARCANNARMFQLIVITHDNRFVEHLRQLCRPEWVYSVSKDD 1344


>gi|341882968|gb|EGT38903.1| hypothetical protein CAEBREN_31573 [Caenorhabditis brenneri]
          Length = 1333

 Score =  171 bits (433), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 137/226 (60%), Gaps = 16/226 (7%)

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            Q  ++  K+  K+ Q  +++ R  D +I+L   E A +DL++Y   LD +L+ FHT KM 
Sbjct: 1093 QQKVASTKLATKECQRAELNYR--DAIIELALHEEAIEDLNKYRKCLDASLITFHTEKMA 1150

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTR---SYSYKVLM--QTGDAELEMRGRC 1104
             +N II ELW++ Y   DI  IRI SD+    T    +Y Y V+M  ++G +E+EMRGRC
Sbjct: 1151 AVNVIIDELWRKVYNSTDITTIRIRSDAASESTSKKVAYDYNVMMVYESG-SEVEMRGRC 1209

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE- 1163
            SAGQK+LASL+IR+ALAE F   C ++ALDEPTTNLD    + +A  L  ++E R+G + 
Sbjct: 1210 SAGQKMLASLLIRIALAEVFGGLCSMIALDEPTTNLDEWKVDGMANVLSDLIEARRGYDQ 1269

Query: 1164 -------NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
                   + Q++VITHDER    +      E  Y +AKD+H  S +
Sbjct: 1270 DGNLRGRDMQMVVITHDERLVNKLTISCRPEYIYCLAKDEHGVSYL 1315



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 21/149 (14%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G    L+ +  D ++ +   +GV KAI + VIF HQ+E+ WPL +P  LKK+FD+IF  T
Sbjct: 132 GTTTTLNSKVCDFNKAILHHLGVPKAIFKYVIFCHQEESTWPLSEPKELKKRFDEIFQLT 191

Query: 78  RYTKALE----VIKKLHKD-QAQEIKT--YKLKLEN--------------LQTLKDAAYK 116
           ++ KA E    ++ K  KD + QE++   Y++ +++              +   K+A  K
Sbjct: 192 KFVKAQERMKMIVGKFAKDKETQEVQKQLYEMHVKDKLDARKNYDDCDKKISKGKEAMIK 251

Query: 117 LRESISQDQEKTEALKNQMQELEKSIQDI 145
           L+E  SQ  ++ E L+  + +LE  +  I
Sbjct: 252 LKERKSQGIKRCEELRTSLAKLEDILTSI 280


>gi|308503629|ref|XP_003113998.1| CRE-RAD-50 protein [Caenorhabditis remanei]
 gi|308261383|gb|EFP05336.1| CRE-RAD-50 protein [Caenorhabditis remanei]
          Length = 1311

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/224 (41%), Positives = 133/224 (59%), Gaps = 13/224 (5%)

Query: 990  QTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKME 1049
            Q  I+  K+  K+ Q  +++ R  D +I++   + +  DL++Y   LD +L++FHT KM 
Sbjct: 1072 QQKIAEQKLSTKECQRAELNYR--DAIIEIALVKESISDLEKYRKCLDVSLIQFHTEKMT 1129

Query: 1050 EINKIIRELWQQTYRGQDIDYIRIHSD--SEGAGTRSYSYKVLM-QTGDAELEMRGRCSA 1106
             +N II ELW++ Y   DI  IRI SD  SE    R+Y Y V+M Q   AE+EMRGRCSA
Sbjct: 1130 AVNVIIDELWRKVYNSTDITTIRIRSDAASETTSKRAYDYNVMMVQESGAEVEMRGRCSA 1189

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE--- 1163
            GQK+LASL+IR+ALAE F   C ++ALDEPTTNLD    + +A  L  ++  R+  +   
Sbjct: 1190 GQKMLASLLIRIALAEVFGGLCSMIALDEPTTNLDEGKVDGMANVLSDLIAARRSYDEDG 1249

Query: 1164 -----NFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
                 + Q+++ITHDER    I      E  Y + KD+H  S +
Sbjct: 1250 NVRGRDMQMVIITHDERLVNKITLGCRPEYIYCLGKDEHGVSFL 1293


>gi|300121232|emb|CBK21613.2| unnamed protein product [Blastocystis hominis]
          Length = 216

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 80/148 (54%), Positives = 109/148 (73%), Gaps = 1/148 (0%)

Query: 1035 ALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRS-YSYKVLMQT 1093
             ++  L+++H  K+EEIN+ IR+LW +TY+G+DI+ I I S     G+++ + Y V M  
Sbjct: 3    GIEAGLLKYHQAKIEEINERIRDLWTETYQGKDIESIEIESKQITRGSKTVFDYAVYMVK 62

Query: 1094 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALH 1153
               +L+MRGRCSAGQK LASL+IR+ALA+ FC +CGILALDEPTTNLD  N E+L  +L 
Sbjct: 63   NHTKLQMRGRCSAGQKALASLVIRIALADAFCSHCGILALDEPTTNLDNDNKEALVESLV 122

Query: 1154 RIMEDRKGQENFQLIVITHDERFAQLIG 1181
            +I++ R  Q NFQLIVITHDE F Q++G
Sbjct: 123  KIIKYRSQQRNFQLIVITHDEEFGQMVG 150


>gi|390459672|ref|XP_002744663.2| PREDICTED: DNA repair protein RAD50 [Callithrix jacchus]
          Length = 510

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 102/139 (73%), Gaps = 6/139 (4%)

Query: 1067 DIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALA 1121
            DI+YI I SD     S     R+Y+Y+V+M  GD  L+MRGRCSAGQK   SLIIRLALA
Sbjct: 358  DIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKA-TSLIIRLALA 416

Query: 1122 ETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIG 1181
            ETFCLNCGI+ALDEPTTNLD  N ESLA AL  I++ R  Q NFQL+VITHDE F +L+G
Sbjct: 417  ETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLG 476

Query: 1182 QRQHAEKYYRVAKDDHQHS 1200
            + ++ EK+YR+ K+  Q S
Sbjct: 477  RSEYVEKFYRIKKNIDQCS 495



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 154/255 (60%), Gaps = 17/255 (6%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSA RY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSAARYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALESRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284 KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQ-- 341

Query: 238 DAYTAEITNLLSEAG 252
                E + LL E G
Sbjct: 342 -----EKSELLVEQG 351


>gi|429327275|gb|AFZ79035.1| DNA repair protein rad50, putative [Babesia equi]
          Length = 1123

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 131/203 (64%), Gaps = 11/203 (5%)

Query: 1000 LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
            L+    K+  K + +  I+LK+  M  +DL+RY   L+  L ++H+ K++ IN +++ +W
Sbjct: 912  LESKSIKNAQKMYTETCIELKSHHMTKEDLERYSKVLESGLHKYHSEKIDYINNVLKRVW 971

Query: 1060 QQTYRGQDIDYIRIHSDSEG------AGTRSYSYKVLM--QTGDAELEMRGRCSAGQKVL 1111
            +  Y G  IDYI I S+ +         ++SY+Y+++M  Q G  +++M+G CSAG+++L
Sbjct: 972  RDVYSGNYIDYIAIQSNVDENISLSELTSKSYNYRIIMVLQNG-MKMDMKGHCSAGERIL 1030

Query: 1112 ASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVIT 1171
            +SLIIR+AL E+F  NCGILALDEPTTNLD  N  SL  +L +++ +     NFQLI+IT
Sbjct: 1031 SSLIIRIALIESFSENCGILALDEPTTNLDKENIRSLELSLSKLVNE--SFHNFQLIIIT 1088

Query: 1172 HDERFAQLIGQRQHAEKYYRVAK 1194
            HDE FA+ +      +KY+R+ K
Sbjct: 1089 HDEEFAKRMATLCSCDKYFRLDK 1111



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 132/254 (51%), Gaps = 33/254 (12%)

Query: 3   YKAIESVLQTINPHTG-----------EKVCLSYRCADMDREVPALMGVSKAILENVIFV 51
           +K  E++L+ +  H G           +K C++ +  D+D  +P+LMG ++AI++NVIF 
Sbjct: 113 FKGTENILE-VELHNGKVIYDNHIQIQQKRCVTMKTTDIDLTLPSLMGFTRAIIDNVIFC 171

Query: 52  HQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLK 111
           HQDE NWPL D + +K +FDD+   +RYTKAL VI K  K+Q   I+  + +LE  ++  
Sbjct: 172 HQDENNWPLDDLAKVKARFDDLLETSRYTKALVVINKAKKEQEDVIRNKQKQLEIYKSQI 231

Query: 112 DAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQI-STMT 170
                +++ +  D++     K +++ LE S++        TE+ L  L+   D+I S + 
Sbjct: 232 LQIADIKKQLDNDKDDIIKTKLEIEALENSLK------QSTEI-LTTLKSKYDKIASNLD 284

Query: 171 ARRST------LFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRES-------DIS 217
             R+T        E+  K + +LAE  E++ +++K +       +   ES       +I 
Sbjct: 285 EYRNTEGFYLKTKEEHDKLHESLAEIYEESLDDIKQYHATLTAELRTSESKNSILSGNIE 344

Query: 218 KLEREKNDMDTKIK 231
           KL R  ND   K++
Sbjct: 345 KLVRSLNDAHMKLR 358


>gi|393909326|gb|EJD75408.1| hypothetical protein LOAG_17434 [Loa loa]
          Length = 223

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/173 (49%), Positives = 115/173 (66%), Gaps = 6/173 (3%)

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG--TRSY 1085
            DL  Y  A+DK+++ FHT KMEEIN+++  LW+Q Y G DI+ I+I S+S G     +SY
Sbjct: 33   DLANYIRAVDKSVVEFHTQKMEEINEVLSSLWEQVYHGNDIEAIQIKSESAGENEKKKSY 92

Query: 1086 SYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNA 1145
            +Y+V+M  G  E++M GRCSAGQK+LAS++IR+AL++ FC  C I+ALDEPT NLD    
Sbjct: 93   NYRVVMYVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEPTANLD--VL 150

Query: 1146 ESLAAALHRIMEDRKGQEN--FQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            ++L   L  I+  R       FQLIVITHD RF + + Q    E  Y V+KDD
Sbjct: 151  KNLGDMLADIISARCANNARMFQLIVITHDNRFVEHLRQLCRPEWVYSVSKDD 203


>gi|49256867|gb|AAH73850.1| RAD50 protein, partial [Homo sapiens]
 gi|80473913|gb|AAI08283.1| RAD50 protein [Homo sapiens]
          Length = 723

 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 165/624 (26%), Positives = 309/624 (49%), Gaps = 65/624 (10%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284 KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R  
Sbjct: 344 SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVR-- 401

Query: 298 LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
               ER   + K +++L    A    L    + K I+  +  K      +E+K+ IL   
Sbjct: 402 ----ERQEGEAKTANQLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK- 452

Query: 352 KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
           K+ E +   +ELQ    +   I E + ++ I+ ER   +L++ E   N+   + E+ +  
Sbjct: 453 KQNELKNVKYELQQLEGSSDRILELDQEL-IKAER---ELSKAEKNSNVETLKMEVISLQ 508

Query: 410 -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509 NEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL- 567

Query: 465 GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRK 521
           G  P  + L+              D L SKS    KE+N  + ++ ++   L+   +++ 
Sbjct: 568 GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASSEQNKN 609

Query: 522 DVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF 578
            ++++ +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F
Sbjct: 610 HINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 669

Query: 579 --ERVARAHHVCPCCERPFSAEEE 600
             +        CP C+R F  E E
Sbjct: 670 ITQLTDENQSCCPVCQRVFQTEAE 693


>gi|343957939|emb|CBY93678.1| putative rad50 protein [Glomus diaphanum]
          Length = 241

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 145/236 (61%), Gaps = 3/236 (1%)

Query: 920  QIRRNIEDNLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEV 979
            Q  R+I+DN+ YR  K ++ K   + + L +  L+  G+++++ +L     E++R+ SE 
Sbjct: 8    QTERDIQDNIEYRYLKVEIGKLQEQTKELRQE-LENQGLTSYKEKLAFLQDEQNRMTSEF 66

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
            +   G M   + +I+ +K DLK  QYK+I+ R  +Q       + A  ++DR  N L+  
Sbjct: 67   SSITGNMEQLKVSINFDKDDLK-TQYKNIEGRFKEQWAIKHGDQEAITEIDRLINELENT 125

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGA-GTRSYSYKVLMQTGDAEL 1098
            LM +HT KM+EIN  I ELW + Y G DI+ I I S+ E     RSY+Y+V+M+     L
Sbjct: 126  LMNYHTRKMQEINAKIYELWDKAYNGDDIESIEIRSEQESTQNNRSYNYRVVMKKNGKVL 185

Query: 1099 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHR 1154
            +MRGRCSAGQ++LAS+IIR+ALAE F    G+  LDEPTTNLD  +  +L+ +L R
Sbjct: 186  DMRGRCSAGQRMLASIIIRMALAECFSKGFGMFVLDEPTTNLDENHINNLSESLRR 241


>gi|38511824|gb|AAH62603.1| RAD50 protein [Homo sapiens]
          Length = 557

 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 170/300 (56%), Gaps = 10/300 (3%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284 KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344 SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRER 403


>gi|158254626|dbj|BAF83286.1| unnamed protein product [Homo sapiens]
          Length = 615

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 170/300 (56%), Gaps = 10/300 (3%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L E++E     TDE+L +  +N +  V ++E  +    RE   ++ + + L Q  
Sbjct: 284 KDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344 SELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRER 403


>gi|269860026|ref|XP_002649736.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348]
 gi|220066795|gb|EED44266.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348]
          Length = 1180

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 139/220 (63%), Gaps = 14/220 (6%)

Query: 980  NRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
            N C+G +     N +  + +LK   Y D  K++ +  I+LK  E++ +D+++   AL+K 
Sbjct: 958  NLCKGEIKQLDINKTARESELKA--YSDALKQYNEAAIELKLLELSIEDINKSVMALEKT 1015

Query: 1040 LMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLM----QTGD 1095
            ++ +H+ K+EEIN I++ELW +TY G+DI+ I + SD     + +Y+YK++M        
Sbjct: 1016 VLEYHSNKIEEINDILKELWSETYNGKDIERIELKSD---LTSTNYNYKLIMYKLNNNNI 1072

Query: 1096 AELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRI 1155
            +ELEMRGRCSAGQK++AS++ R+AL E F  N  +LALDEPTTNLD  N E LA  L+ +
Sbjct: 1073 SELEMRGRCSAGQKMIASILFRIALMEVFS-NINVLALDEPTTNLDKANIECLAKTLNNL 1131

Query: 1156 MEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKD 1195
            +  +K   N QLI+ITHDE F  ++      + YY + +D
Sbjct: 1132 LLRKK---NMQLIIITHDEEFVSMLNTIG-CDVYYTIERD 1167



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 52/81 (64%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G K+ LS + +D+D+ VP  +    +ILEN+IF HQ+E  WP+ DP  LK+K D+IF  T
Sbjct: 121 GNKLLLSNKISDVDKLVPIYLDSFPSILENIIFCHQEEMAWPVGDPVILKRKIDEIFGNT 180

Query: 78  RYTKALEVIKKLHKDQAQEIK 98
           +Y K L+ +K   K+  Q +K
Sbjct: 181 KYNKTLQQLKITKKELEQSVK 201


>gi|440912189|gb|ELR61781.1| DNA repair protein RAD50 [Bos grunniens mutus]
          Length = 1304

 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 177/736 (24%), Positives = 353/736 (47%), Gaps = 70/736 (9%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + +  ++  E  +  + +++   E  L  + ++ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L +++E     +DE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284 KDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   M  RDS IQ L  +  L      PFS     NF   +R R
Sbjct: 344 SELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHRLVRER 403

Query: 298 LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHI 351
                     ++K  E A ++  D       + K I+  +  K      +E+K+ IL   
Sbjct: 404 ----------QEKEAETASQLLNDFVRKEALKQKQIDEIRDKKTGLGRIIELKSEIL--- 450

Query: 352 KEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQSELFA-- 409
            +K+NE  + + ++  L  S   +R  ++  E+ +   +L++ E   N+   ++E+ +  
Sbjct: 451 TKKQNELKNVKYELQQLEGS--SDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQ 508

Query: 410 -----MDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
                +D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L 
Sbjct: 509 NEKADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKYRHSDELTSLL- 567

Query: 465 GRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS-----KH 519
           G  P  + L+              D L SKS    KE+N  + ++ ++   L+     K+
Sbjct: 568 GYFPNKKQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKN 609

Query: 520 RKDVDSKKRFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFD 576
             +++ K++  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++ 
Sbjct: 610 HINIELKRK--EEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYS 667

Query: 577 PF--ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQ 633
            F  +        CP C+R F  E E  E +   + K   + + +K    E    +    
Sbjct: 668 QFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRD 727

Query: 634 QLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEV 693
           ++  L  + +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES +V
Sbjct: 728 EMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKV 787

Query: 694 LVQPVETADRLFQEIQ 709
            +  V   +RL  E++
Sbjct: 788 CLTDVTIMERLQMELK 803


>gi|170649702|gb|ACB21284.1| DNA repair protein RAD50 (predicted) [Callicebus moloch]
          Length = 1102

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 181/742 (24%), Positives = 359/742 (48%), Gaps = 58/742 (7%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSKA+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K Y+++L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+  + +   
Sbjct: 228 TSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIIRLDNEIKALESRKKQMEKDNS 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
           +    + +  + TDE+L +  +N +  V ++E      +RE   ++ + K L Q      
Sbjct: 288 ELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKWVDCQRELEKLNKESKLLNQEKSELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
            E   L  +A  H   +  RDS IQ L  +  L      PFS     NF   ++ R    
Sbjct: 348 VEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHRLVKER---- 403

Query: 302 ERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAK------MEIKAGILKHIKEKE 355
            +++E K  S +L    A    L    + K I+  +  K      +E+K+ IL   K+ E
Sbjct: 404 -QEMETKTAS-QLMNDFAEKETL----KQKQIDEIRDKKTGLGRIIELKSEILSK-KQNE 456

Query: 356 NERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAERE-----FEINIRQKQSELFAM 410
            +   +ELQ    +   I E + ++ I+ ER+ ++ AE+       ++ +   Q+E   +
Sbjct: 457 LKNVKYELQQLEGSSDRILELDQEL-IKAERELSK-AEKNSNVETLKMEVINLQNEKADL 514

Query: 411 DQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLD 470
           D+ ++ L++E + L   +  R ++ +   +  +  ++ +KI   + D++  +L G  P  
Sbjct: 515 DRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLL-GYFPNK 573

Query: 471 RDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLS---KHRKDVDSKK 527
           + L+              D L SKS    KE+N  + ++ ++   L+   +++  ++++ 
Sbjct: 574 KQLE--------------DWLHSKS----KEINQTRDRLAKLNKELASAEQNKNHINNEL 615

Query: 528 RFIESKLESLNQQIFSIDTYQKV---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVA 582
           +  E +L S   ++F +   Q     LD  KE+ +    +  +  G   ++  F  +   
Sbjct: 616 KRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTD 675

Query: 583 RAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMV 641
                CP C+R F  E E  E +   + K   + + +K    +    +    ++  L  +
Sbjct: 676 ENQSCCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESDLKKKEKRRDEMLGLVPM 735

Query: 642 YEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETA 701
            +  + L ++ IP     L  +  ++ +     ++   +L  I  ++ES ++ +  V   
Sbjct: 736 RQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTIM 795

Query: 702 DRLFQEIQLWQKQVDDLEYMLD 723
           +R FQ+    ++QV  LE  L+
Sbjct: 796 ER-FQDA---KEQVSPLETTLE 813



 Score =  147 bits (371), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 95/132 (71%), Gaps = 5/132 (3%)

Query: 984  GTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRF 1043
            G    Y+  I   K +L++ Q++D ++++ + +I ++TTE+ NKDLD YY  LD+A+M+F
Sbjct: 969  GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 1028

Query: 1044 HTMKMEEINKIIRELWQQTYRGQDIDYIRIHSD-----SEGAGTRSYSYKVLMQTGDAEL 1098
            H+MKMEEINKIIR+LW+ TYRGQDI+YI I SD     S     R+Y+Y+V+M  GD  L
Sbjct: 1029 HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTAL 1088

Query: 1099 EMRGRCSAGQKV 1110
            +MRGRCSAGQK 
Sbjct: 1089 DMRGRCSAGQKA 1100


>gi|123444623|ref|XP_001311080.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892876|gb|EAX98150.1| hypothetical protein TVAG_332600 [Trichomonas vaginalis G3]
          Length = 1292

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 183/686 (26%), Positives = 327/686 (47%), Gaps = 111/686 (16%)

Query: 574  MFDPFERVARAHHV-CPCCERPFS-AEEEDEFVKKQ--------RVKAASSAEHMKVLS- 622
            +++ F   +R+    CP C+R F    E DEF+K +          K AS+ E ++ +S 
Sbjct: 649  IYEEFVSESRSESCQCPLCKRKFKDNSERDEFIKNELEKVLKDLPSKIASNEEKLRKVSE 708

Query: 623  -LESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVL 681
             +ES       + L     +Y++ +    E IP  E+ +  L  + DQ  + +  +    
Sbjct: 709  KIES------IENLRDKHFIYQQVL----EDIPKLEEEIDTLKSKRDQNFEEYQQIKQNY 758

Query: 682  AQIKADKESVEVLVQPVET-ADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEE---IQL 737
             +I++ KE  E  V P +   +RL   +  ++ + D+L   L+     +  +EE   I  
Sbjct: 759  DEIRSKKEKFEHEVIPKKNDVERLISYVSKYESENDNLRSKLNKDLPNLSVIEEEKRILE 818

Query: 738  ELSGSLSTKD-NLQNELEKLRD-----EQRYME--NDLSNIQIRW---HTLREEKVKAAN 786
            + S +L T+  NL  +L +  D     + RY E  N L++ + ++   + ++E++ K   
Sbjct: 819  DKSQNLQTEQANLMKKLTEASDRKSKLQSRYNEVNNKLNDYKSKFDDKNKIKEKRQKRGI 878

Query: 787  TLRDVKKAEEELEHL---MEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNRE 843
              RD++    E+E +   M E    +L+   + +A+  L  + +KL +D+    +K+  +
Sbjct: 879  KKRDIENKLIEIERINKEMNEANAQNLES--IKKATNELQLDVDKLNNDF----IKIKND 932

Query: 844  YEEQAEQKINFQQEIEMLLKIASKIKEYYDLRK------------DERFKELQEKKSQSE 891
            +E     KI+  +E      +    ++ Y+L K            DE  K+ ++K+   +
Sbjct: 933  FE-----KISKSKETISKYSVDETNRKIYELEKTIKENEDSLQQLDENLKKWEKKQEADQ 987

Query: 892  SEVKSCKIRTDE------ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
              +   KI+ +E       L ++ ++K+I   ++++ R +    N  + K  +D+   EI
Sbjct: 988  QNMDEIKIKLEENNLVHDYLQKVQKYKEIEHEKEELLRELSGFANIDDLKN-IDRIKQEI 1046

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQY 1005
             + E+R  ++ G  +    L K L +  ++L+  NR                       Y
Sbjct: 1047 LNKEKRSSELQGSYSH---LDKELKDLSKILN--NR-----------------------Y 1078

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            KD +    +  +++  TEM  KDL ++   L+ ++M +H  K+ EIN++++  W+++Y+ 
Sbjct: 1079 KDTNNNLTEIRLKIAATEMTIKDLTKFAEQLNNSIMEYHQRKVLEINELLKAFWEKSYQS 1138

Query: 1066 QDIDYIRI--HSDSEG----AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1119
             DI+ I I  HS +E     +G  SY YKV+M     E+EM GRCS GQKVLASLIIR+A
Sbjct: 1139 MDIENISIVAHSSTENNESKSGRISYDYKVVMFKSGQEVEMSGRCSEGQKVLASLIIRMA 1198

Query: 1120 LAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQL 1179
            LA+ F   C ILALDEPTTNLD  +  + A  L      +   EN QL++ITH   F   
Sbjct: 1199 LAKAF--GCSILALDEPTTNLDSDHMSNFAFLLSNDF--KTMLENQQLLLITHSGDFVDK 1254

Query: 1180 IGQRQHAEKYYRV---AKDDHQHSII 1202
            +      + +Y++   + D H  S I
Sbjct: 1255 VSTDSDIQHFYQLEIESIDGHSFSCI 1280



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 28/239 (11%)

Query: 30  MDREVPALMGVSKAILENVIFVHQDEANWPLQ-DPSTLKKKFDDIFSATRYTKALEVIKK 88
           +++++P L+G+ KAILENVIF  Q +  WP++ +   LK +FD IF +  Y  A+  IK+
Sbjct: 135 VEQQIPRLLGIPKAILENVIFCQQTDQCWPIELNDKDLKLRFDTIFGSDNYESAIGQIKE 194

Query: 89  LHKDQAQEI-----------KTYKLKLENLQTLKDAAYKLRESISQDQEKTEA------- 130
           L K++ +E+           K Y+ K++N +   D   K RE    +QEK E        
Sbjct: 195 LKKNKDKELVQLQKEEINYNKDYEQKVKNEE---DLLKKTREINEIEQEKKEIDVDLTRL 251

Query: 131 --LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALA 188
             + + ++E +  I+D+++ I   E  LK +++  D       R        +   A+L 
Sbjct: 252 HQIADNIEEKQGKIKDLENVISQKEGQLKIIKESIDSFEMNHERVQMTISSCEDLKASLE 311

Query: 189 EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNL 247
            E++   E +   K+  E     ++ D  +++RE  +   K+K L+   + +  E TN 
Sbjct: 312 SELQSNRETINLAKSQIEM----KKHDYERVKREITERTQKLKDLKSKSENFNFEKTNF 366


>gi|71030162|ref|XP_764723.1| RAD50 DNA repair protein [Theileria parva strain Muguga]
 gi|68351679|gb|EAN32440.1| RAD50 DNA repair protein, putative [Theileria parva]
          Length = 1002

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 8/199 (4%)

Query: 1000 LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELW 1059
            L  A Y     ++ +  I+LK+  +A  DLD+YY  L+ +L  +H  K+  IN  ++ +W
Sbjct: 800  LNSAIYTKAQSQYMETYIELKSHIVAKTDLDKYYKYLESSLHNYHLDKINHINSSLKRIW 859

Query: 1060 QQTYRGQDIDYIRIHSDSEGAGT-RSYSYKVLMQT-GDAELEMRGRCSAGQKVLASLIIR 1117
            ++ Y G  IDYI+I     G  T  + S +V+M T    EL+M+G CSAG+++L+SL++R
Sbjct: 860  REVYTGTHIDYIQI----TGLSTLPTISIRVVMVTPSGVELDMKGHCSAGERILSSLVVR 915

Query: 1118 LALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFA 1177
            +AL E F  +C ILALDEPTTNLD  N +SL  +L R++ +     NFQL++ITHDE FA
Sbjct: 916  MALIECFSAHCTILALDEPTTNLDRDNIQSLENSLSRLVNE--SSMNFQLMIITHDEAFA 973

Query: 1178 QLIGQRQHAEKYYRVAKDD 1196
              +      +KY ++ K+D
Sbjct: 974  NKMATLCSCDKYIKLEKND 992



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 1/88 (1%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           + +K  E+VL  I    G+K  L+ +  DMD  VP LMG+SKA+L+NVIF HQDE NWPL
Sbjct: 111 LTFKGTENVLNVI-AQDGKKKSLALKTTDMDMAVPLLMGMSKALLDNVIFCHQDENNWPL 169

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKK 88
            DPS +K +FDD+   +RYTKAL+ I++
Sbjct: 170 DDPSKIKSRFDDLLETSRYTKALQSIQR 197


>gi|385653654|emb|CBL87034.1| RAD50 protein, partial [Oncorhynchus mykiss]
          Length = 128

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/113 (66%), Positives = 89/113 (78%)

Query: 1088 KVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAES 1147
            +V+M  GD  L+MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLD  N ES
Sbjct: 1    RVVMVKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIES 60

Query: 1148 LAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
            LA AL  I++ R  Q NFQL++ITHDE F +L+G+  + E +YR+ K+  Q S
Sbjct: 61   LAHALVEIIKSRSRQRNFQLLIITHDEDFVELMGRSSYVEHFYRIRKNMDQCS 113


>gi|145512287|ref|XP_001442060.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409332|emb|CAK74663.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1237

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 135/214 (63%), Gaps = 14/214 (6%)

Query: 1006 KDIDKRH-------FDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIREL 1058
            KDI++R+        + L +   T+    DL +Y   L+  ++  H  KM+EINK + + 
Sbjct: 1022 KDINRRYDGSEQKRLEMLCEYVATQQFISDLKKYLQILEATMLECHGQKMKEINKYLLDT 1081

Query: 1059 WQQTYRGQDIDYIRIHSD---SEGAGTRSYSYKVLMQT-GDAELEMRGRCSAGQKVLASL 1114
            WQ+ Y GQDI +I +  D   ++   ++ Y+Y+++M+T  + E++M+GRCS GQK+LAS+
Sbjct: 1082 WQKIYNGQDIKFIEVKFDEIPNQKKISKKYNYRLVMRTMNNTEIDMKGRCSMGQKMLASI 1141

Query: 1115 IIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE-NFQLIVITHD 1173
            + R+ALAE F  NC  LALDEPT+NLD  + ++LA  L+ ++E  K  E   QLI+ITHD
Sbjct: 1142 VFRMALAECFGSNCCFLALDEPTSNLDRKHIKTLAEQLNSLIELMKQHEQQIQLIIITHD 1201

Query: 1174 ERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
                +L+  ++H+E YY ++K ++  S IE ++I
Sbjct: 1202 MDLVKLL--KRHSESYYMISKKENGFSGIEERKI 1233


>gi|328768815|gb|EGF78860.1| hypothetical protein BATDEDRAFT_12791 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 114

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/108 (68%), Positives = 88/108 (81%)

Query: 1087 YKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAE 1146
            Y+V+M  G+ EL+MRGRCSAGQKVL S++IRLALAETFC+NCGILALDEPTTNLD  N E
Sbjct: 4    YQVVMVKGETELDMRGRCSAGQKVLTSIMIRLALAETFCVNCGILALDEPTTNLDRENIE 63

Query: 1147 SLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAK 1194
            SLA +L  I++ R+ Q NFQLIVITHDE F QL+G  + A+ YYRV K
Sbjct: 64   SLAESLAEIIQYRRQQSNFQLIVITHDEEFMQLLGSGEFADFYYRVEK 111


>gi|84995674|ref|XP_952559.1| DNA repair protein rad50 [Theileria annulata strain Ankara]
 gi|65302720|emb|CAI74827.1| DNA repair protein rad50, putative [Theileria annulata]
          Length = 1139

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 57/293 (19%)

Query: 932  RETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQT 991
            +E KA  DK  +E  SL  ++  + G+          L+ R+   ++++           
Sbjct: 866  KEIKADYDKITNECSSLSHKIATMNGM----------LISREENAAKLSEM--------- 906

Query: 992  NISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEI 1051
             +S +     Q+QY        +  I+LK+  +A  DL++YY  L+ +L  +H  K+  I
Sbjct: 907  -LSSDSFSRAQSQY-------METYIELKSHIVAKMDLEKYYKYLESSLHNYHLEKINNI 958

Query: 1052 NKIIRELWQQTYRGQDIDYI-------------------------RIHSDSEGA--GTRS 1084
            N  ++ +W++ Y G  IDYI                         ++  D       + S
Sbjct: 959  NSSLKRIWREVYTGTHIDYIQSEEINMDFLDILVNTRFICCLVQSKVDKDVSPTEISSHS 1018

Query: 1085 YSYKVLMQTGDA-ELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGP 1143
            YSY+V+M T +  EL+M+G CSAG+++L+SL++R+AL E F  NC ILALDEPTTNLD  
Sbjct: 1019 YSYRVVMVTPNGVELDMKGHCSAGERILSSLVVRMALIECFSTNCTILALDEPTTNLDKD 1078

Query: 1144 NAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDD 1196
            N +SL  +L +++ +     NFQL++ITHDE FA  +      +KY ++ K+D
Sbjct: 1079 NTQSLENSLSKLVNE--SNLNFQLMIITHDEGFANKMATLCSCDKYIKLEKND 1129



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 12/189 (6%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           + +K  E+VL  +    G+K  L+ +  DMD  VP LMG+SKA+L+NVIF HQDE NWPL
Sbjct: 111 LTFKGTENVLN-VTSQDGKKKSLALKTTDMDIAVPLLMGMSKALLDNVIFCHQDENNWPL 169

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           +DPS +K +FDD+   +RYTKAL+ I++  ++Q   I   K KL+  ++       L  +
Sbjct: 170 EDPSKIKSRFDDLLETSRYTKALQSIQRAKREQEDMIILKKSKLDAYKSQILQVKFLNLN 229

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           +SQ  +  + L+   QE+ K+ ++I       ELT K + +M ++   M A+R   FE+ 
Sbjct: 230 LSQIADLRKQLETSRQEISKTKKEI-------ELTQKQMNEMNEK---MLAKRK-YFEES 278

Query: 181 QKQYAALAE 189
             +Y    E
Sbjct: 279 SSKYNEYCE 287


>gi|440296842|gb|ELP89603.1| hypothetical protein EIN_526280, partial [Entamoeba invadens IP1]
          Length = 352

 Score =  157 bits (397), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)

Query: 1028 DLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT---RS 1084
            DL++   ++D A+ ++H  KM+EIN  I +LW   Y   DI  ++I +D E   T   R+
Sbjct: 168  DLNKIIVSVDSAMAKYHEEKMKEINNTIHDLWDGIYIANDITDVKIIADVEEKKTTTRRN 227

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            +SY+V+M   + E++MRGRCS GQK LASLIIR+ALA+TFC  C +LALDEPT NLD  +
Sbjct: 228  FSYRVVMVKDNVEMDMRGRCSMGQKALASLIIRIALAKTFCTKCAVLALDEPTINLDADH 287

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSII 1202
              +LA  L +++ D      FQ+ +ITHD+ F + +  +    ++YR+ +D +  S +
Sbjct: 288  CSNLATQLVKLLSDDGKLAQFQIFLITHDQDFVKKM--KDFGNEFYRIDRDQNNCSCV 343


>gi|34849666|gb|AAH58180.1| Rad50 protein [Mus musculus]
          Length = 661

 Score =  154 bits (390), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 252/491 (51%), Gaps = 34/491 (6%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  +    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVITRMKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALDTLRQVRQTQVQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + +  ++  E  ++ + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLASSQEIVRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284 KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   +  RDS IQ L     L      PFS     NF   ++ R
Sbjct: 344 AELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKER 403

Query: 298 -------LSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEI---KAGI 347
                   S L  DL DK+     ALK      L   DR   +    + K EI   K   
Sbjct: 404 QEREAKTASQLLSDLTDKE-----ALKQRQLDEL--RDRKSGLGRTIELKTEILTKKQSE 456

Query: 348 LKHIKEKENERDSFELQISNLN--LSHIDERENKMRIEVERKTNQLAE-REFEINIRQKQ 404
           L+H++ +  + +    +I  L+  L+   +++ ++R    R +++L     +  N +Q +
Sbjct: 457 LRHVRSELQQLEGSSDRILELDQELTKATDKDEQIRKIKSRHSDELTSLLGYFPNKKQLE 516

Query: 405 SELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
             L +   K K +N+ +D LA  +++       K  + N  KK ++ +  Y+DK+ DV  
Sbjct: 517 DWLHS---KSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDKLFDVC- 572

Query: 465 GRLPLDRDLKK 475
           G   L+ DL +
Sbjct: 573 GSQDLESDLGR 583


>gi|74184416|dbj|BAE25735.1| unnamed protein product [Mus musculus]
          Length = 486

 Score =  153 bits (387), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 174/318 (54%), Gaps = 17/318 (5%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  +    GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVITRMKH--GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + +  ++  E  ++ + +++   E  L  + K+ ++I  + +R+    +Q +
Sbjct: 228 TSKEAQLASSQEIVRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRK----KQME 283

Query: 182 KQYAALAEEIE----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNI 237
           K  + L +++E     TDE+L +  +N +  V ++E  +   +RE   ++ + + L Q  
Sbjct: 284 KDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEK 343

Query: 238 DAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
                E   L  +A  H   +  RDS IQ L     L      PFS     NF   ++ R
Sbjct: 344 AELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKER 403

Query: 298 -------LSDLERDLEDK 308
                   S L  DL DK
Sbjct: 404 QEREAKTASQLLSDLTDK 421


>gi|54038573|gb|AAH84223.1| LOC495064 protein, partial [Xenopus laevis]
          Length = 724

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 152/614 (24%), Positives = 302/614 (49%), Gaps = 45/614 (7%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  I    GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVITRIK--HGEKVSLSTKCAEMDKEMISALGVSAAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK KFD+IFSATRY KALE +KK+   QA  ++ Y+++++ L+  K+ A ++++++
Sbjct: 168 EGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVREYQVEIKYLKQNKEKAREIQDNL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
              +++    K  ++ +E  ++ + D++   +  L  + ++ ++I  + +R+ T+ +  Q
Sbjct: 228 QSKEKQLAVSKENVKSIESQLEPLKDRLADIQRNLSKVMRLDNEIKALESRKRTMEQDNQ 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                + +  + TDEEL     N +  V ++E  ++  +RE +    + + L +      
Sbjct: 288 DLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREMDRACKESQRLNREKGELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDL 301
            +   L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++      
Sbjct: 348 VQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVK------ 401

Query: 302 ERDLEDKKKSDELALKMAWDSYLDAN--DRWKNIEAQKQAKMEIKAGIL--KHIKEKENE 357
           ER  +D+  ++++  + +    +     D  ++ +   +  +E+K+     KH   K  +
Sbjct: 402 ERQEKDEAHANQILREFSEREAMKQRQLDEMRDKKTGLERTIELKSSTQSKKHTDLKNVK 461

Query: 358 RDSFELQISNLNLSHIDERENKMRIE---VERKTNQLAEREFEINIRQKQSELFAMDQKI 414
            +  +L+ S+  L  +DE   K   E   VE+  N  A R   + ++ ++SEL   D+ +
Sbjct: 462 YELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVLQLQNQKSEL---DRNV 518

Query: 415 KALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLK 474
           + L++E + +   +  R ++ + K +  +  ++ +KI   + D++  +L G  P  + L+
Sbjct: 519 RKLDQEMEQMNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDEL-SLLLGYFPNKKQLE 577

Query: 475 KEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNL---SKHRKDVDSKKRFIE 531
                         D L SK     K++N  + K+  +T  L    +++  + ++ R  E
Sbjct: 578 --------------DWLYSKR----KDINQTRDKLARLTKELVAAEQNKNHLSNELRRKE 619

Query: 532 SKLESLNQQIFSIDTYQKV-LDSAKEKRDVQKSKYNIA--DGMRQMFDPF--ERVARAHH 586
            +  S  +++F +   Q    D ++ + D++K+    A   G   ++  F          
Sbjct: 620 EQSASFEEKVFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQP 679

Query: 587 VCPCCERPFSAEEE 600
            CP C+R F +E E
Sbjct: 680 CCPVCQRIFPSEAE 693


>gi|170284923|gb|AAI61019.1| rad50 protein [Xenopus (Silurana) tropicalis]
          Length = 555

 Score =  153 bits (386), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 169/300 (56%), Gaps = 10/300 (3%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRMKH-GEKVSLSTKCAEMDKEMISALGVSSAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK KFD+IFSATRY KALE ++K+  +QAQ ++ Y+++++ L+  K+ A ++++++
Sbjct: 168 EGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVREYQVEIKYLKQNKEKAREIQDNL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
              +++    K  ++ +E  ++ + D++   +  L  + ++ ++I  + +R+ T+ +  Q
Sbjct: 228 QSKEKQLAVSKENVKSIESQLEPLKDRLADIQRNLTKVMRLDNEIKALESRKRTMEKDNQ 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                + +  + TDEEL +   N +  V ++E    KL   + DMD   K   Q ++   
Sbjct: 288 DLEEKMEKVFQGTDEELSDMYQNHQRTVREKE---RKLNDHQRDMDRACKE-SQRLNREK 343

Query: 242 AEI----TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
            E+      L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++ R
Sbjct: 344 GELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVKER 403


>gi|114108152|gb|AAI22970.1| rad50 protein [Xenopus (Silurana) tropicalis]
          Length = 586

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 169/300 (56%), Gaps = 10/300 (3%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRMKH-GEKVSLSTKCAEMDKEMISALGVSSAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK KFD+IFSATRY KALE ++K+  +QAQ ++ Y+++++ L+  K+ A ++++++
Sbjct: 168 EGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVREYQVEIKYLKQNKEKAREIQDNL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
              +++    K  ++ +E  ++ + D++   +  L  + ++ ++I  + +R+ T+ +  Q
Sbjct: 228 QSKEKQLAVSKENVKSIESQLEPLKDRLADIQRNLTKVMRLDNEIKALESRKRTMEKDNQ 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                + +  + TDEEL +   N +  V ++E    KL   + DMD   K   Q ++   
Sbjct: 288 DLEEKMEKVFQGTDEELSDMYQNHQRTVREKE---RKLNDHQRDMDRACKE-SQRLNREK 343

Query: 242 AEI----TNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
            E+      L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++ R
Sbjct: 344 GELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVKER 403


>gi|66911163|gb|AAH97553.1| LOC495064 protein, partial [Xenopus laevis]
          Length = 555

 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 164/296 (55%), Gaps = 2/296 (0%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  I    GEKV LS +CA+MD+E+ + +GVS A+L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVITRIKH--GEKVSLSTKCAEMDKEMISALGVSAAVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK KFD+IFSATRY KALE +KK+   QA  ++ Y+++++ L+  K+ A ++++++
Sbjct: 168 EGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVREYQVEIKYLKQNKEKAREIQDNL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
              +++    K  ++ +E  ++ + D++   +  L  + ++ ++I  + +R+ T+ +  Q
Sbjct: 228 QSKEKQLAVSKENVKSIESQLEPLKDRLADIQRNLSKVMRLDNEIKALESRKRTMEQDNQ 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                + +  + TDEEL     N +  V ++E  ++  +RE +    + + L +      
Sbjct: 288 DLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREMDRACKESQRLNREKGELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
            +   L  EA  H   +  RDS I+ L A+  L      PF+     NF   ++ R
Sbjct: 348 VQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQTSNFQMLVKER 403


>gi|190402278|gb|ACE77687.1| DNA repair protein RAD50 (predicted) [Sorex araneus]
          Length = 513

 Score =  150 bits (379), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 164/296 (55%), Gaps = 2/296 (0%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV +S +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSISSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++ + Q Q++K  + +L+ L+  K+ A ++R+ I
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQI 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  + K  ++  E  +  + +++   E  L  + ++ ++I  + +R+  + +  +
Sbjct: 228 TNKEAQLASSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNR 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
           +    + +  + TDE+L +   N +  V ++E  +   +RE   ++ + +   Q      
Sbjct: 288 ELEQKMEKVFQGTDEQLNDLYLNHQRTVREKEKRLVDCQRELEKLNKESRLFNQEKSELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRIRSR 297
            E   L  +A  H   +  RDS IQ L  +  L      PF+     NF   +R R
Sbjct: 348 VEQGRLQLQADRHQEHIRARDSLIQSLSTQLELDGFERGPFNERQIKNFHKLVRER 403


>gi|443726521|gb|ELU13641.1| hypothetical protein CAPTEDRAFT_176770 [Capitella teleta]
          Length = 157

 Score =  147 bits (372), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 84/150 (56%), Positives = 103/150 (68%), Gaps = 7/150 (4%)

Query: 1067 DIDYIRIHS--DSEG-----AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1119
            DID I I +  D EG        R+Y+Y+V+M  GD  L+MRGRCSAGQKVLA LIIRLA
Sbjct: 4    DIDTIEIRTSDDDEGPVVVRTNRRTYNYRVVMVRGDVVLDMRGRCSAGQKVLACLIIRLA 63

Query: 1120 LAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQL 1179
            LAETFC N G LALDEPTTNLD  N  SLA +L RI+E+R+ Q NFQL++ITHDE F +L
Sbjct: 64   LAETFCDNFGFLALDEPTTNLDVDNIRSLALSLVRIIENRREQSNFQLLIITHDEEFVEL 123

Query: 1180 IGQRQHAEKYYRVAKDDHQHSIIEAQEIFD 1209
             G+    + +YRV+KD   +S +    I D
Sbjct: 124  FGRANLIDDFYRVSKDHMGYSKVSKYRIQD 153


>gi|426195737|gb|EKV45666.1| hypothetical protein AGABI2DRAFT_206829, partial [Agaricus bisporus
           var. bisporus H97]
          Length = 492

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 19/315 (6%)

Query: 1   MEYKAIESVLQTINPH--TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANW 58
           M  K +E +L   +    TG++  +S +CA+MD E+P L+GVSKA+L+NVIF HQ+E+ W
Sbjct: 107 MTMKTLEGILSLADESEKTGKRSTISTKCAEMDNEIPQLLGVSKAVLDNVIFCHQEESYW 166

Query: 59  PLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR 118
           P  +PS LKKKFD+IF ATRY KAL+ IK L KD+   +KT    L  L+  KD A  ++
Sbjct: 167 PFSEPSNLKKKFDEIFEATRYAKALDSIKTLRKDRITGLKTDNAVLAGLKQEKDRADDVK 226

Query: 119 ESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQD---QISTMTARRST 175
           ++++   E    + N+  E E+  Q  D ++   +  L+   K ++    I  +  ++  
Sbjct: 227 KNLA---ETRSIIANKELEHEQLKQQYDAQVISNQQFLEHATKFRETYIHIENLVKQKER 283

Query: 176 LFEQQQKQYAALA---EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKF 232
           L    Q+ Y  L    +E+  TD+EL+   +NF+  +  ++  +     +K D++  +  
Sbjct: 284 L----QEDYKELKLNLQELAGTDQELETRLSNFDEHIGVQKRKLQAEFSKKADLEGHVGR 339

Query: 233 LEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFIN 292
           + Q      A+   LL EA AH  ++ ER+  I ++  +H +     +P   E A  F++
Sbjct: 340 VRQEHTDCVAQRGRLLGEADAHKMQVAEREQLIHEISEKHKIKGFNYSPLEREKAHEFLS 399

Query: 293 RI----RSRLSDLER 303
           R+    R +++DL++
Sbjct: 400 RLDELRRKQIADLDK 414


>gi|326928755|ref|XP_003210540.1| PREDICTED: DNA repair protein RAD50-like [Meleagris gallopavo]
          Length = 1312

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 157/283 (55%), Gaps = 2/283 (0%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+ T   H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+E+NWPL 
Sbjct: 110 EFKTLEGVI-TRTKH-GEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY KALE ++++   Q  ++K  + +L+ L+  K+ A ++++++
Sbjct: 168 EGKALKQKFDEIFSATRYIKALETLRQVRLKQGMKVKECQTELKYLKQNKEKAQEIQDNL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           +  + +  A K  ++ +E  +  +   +   E  L  +  + + +  + +RR  + +  Q
Sbjct: 228 ANTEAQLSASKENIKSIESQLDPLKSSLAAVEKNLAKVMSLDNDVKALESRRRQMEKDNQ 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
                + +  + TDE+L++   N +  V ++E  +S  +RE +    + +          
Sbjct: 288 DLQQKMEKVFQGTDEQLRDRYKNHQRTVKEKEKRLSDCKRELDRASKECQRFNNEKSELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSN 284
            E   L  +A  H   +  RDS IQ L A+  L     APF++
Sbjct: 348 IERGRLQLQADRHQEHIKVRDSLIQSLSAQLELDGFEQAPFND 390


>gi|84784049|gb|ABC61989.1| Rad50-like protein [Trichomonas vaginalis]
          Length = 1216

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 298/620 (48%), Gaps = 106/620 (17%)

Query: 574  MFDPFERVARAHHV-CPCCERPFS-AEEEDEFVKKQ--------RVKAASSAEHMKVLS- 622
            +++ F   +R+    CP C+R F    E DEF+K +          K AS+ E ++ +S 
Sbjct: 649  IYEEFVSESRSESCQCPLCKRKFKDNSERDEFIKNELEKVLKDLPSKIASNEEKLRKVSE 708

Query: 623  -LESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVL 681
             +ES       + L     +Y++ +    E IP  E+ +  L  + DQ  + +  +    
Sbjct: 709  KIES------IENLRDKHFIYQQVL----EDIPKLEEEIDTLKSKRDQNFEEYQQIKQNY 758

Query: 682  AQIKADKESVEVLVQPVET-ADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEE---IQL 737
             +I++ KE  E  V P +   +RL   +  ++ + D+L   L+     +  +EE   I  
Sbjct: 759  DEIRSKKEKFEHEVIPKKNDVERLISYVSKYESENDNLRSKLNKDLPNLSVIEEEKRILE 818

Query: 738  ELSGSLSTKD-NLQNELEKLRD-----EQRYME--NDLSNIQIRW---HTLREEKVKAAN 786
            + S +L T+  NL  +L +  D     + RY E  N L++ + ++   + ++E++ K   
Sbjct: 819  DKSQNLQTEQANLMKKLTEASDRKSKLQSRYNEVNNKLNDYKSKFDDKNKIKEKRQKRGI 878

Query: 787  TLRDVKKAEEELEHL---MEEKGQLDLDEKLLAEASGPLSKEKEKLLSDYNDLKVKLNRE 843
              RD++    E+E +   M E    +L+   + +A+  L  + +KL +D+    +K+  +
Sbjct: 879  KKRDIENKLIEIERINKEMNEANAQNLES--IKKATNELQLDVDKLNNDF----IKIKND 932

Query: 844  YEEQAEQKINFQQEIEMLLKIASKIKEYYDLRK------------DERFKELQEKKSQSE 891
            +E     KI+  +E      +    ++ Y+L K            DE  K+ ++K+   +
Sbjct: 933  FE-----KISKSKETISKYSVDETNRKIYELEKTIKENEDSLQQLDENLKKWEKKQEADQ 987

Query: 892  SEVKSCKIRTDE------ILVELDRFKDIVRNQDQIRRNIEDNLNYRETKAKVDKFASEI 945
              +   KI+ +E       L ++ ++K+I   ++++ R +    N  + K  +D+   EI
Sbjct: 988  QNMDEIKIKLEENNLVHDYLQKVQKYKEIEHEKEELLRELSGFANIDDLKN-IDRIKQEI 1046

Query: 946  ESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQY 1005
             + E+R  ++ G  +    L K L +  ++L+  NR                       Y
Sbjct: 1047 LNKEKRSSELQGSYSH---LDKELKDLSKILN--NR-----------------------Y 1078

Query: 1006 KDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRG 1065
            KD +    +  +++  TEM  KDL ++   L+ ++  +H  K+ EIN++++  W+++Y+ 
Sbjct: 1079 KDTNNNLTEIRLKIAATEMTIKDLTKFAEQLNNSIXEYHQRKVLEINELLKAFWEKSYQS 1138

Query: 1066 QDIDYIRI--HSDSEG----AGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1119
             DI+ I I  HS +E     +G  SY YKV+M     E+EM GRCS GQKVLASLIIR+A
Sbjct: 1139 MDIENISIVAHSSTENNESKSGRISYDYKVVMFKSGQEVEMSGRCSEGQKVLASLIIRMA 1198

Query: 1120 LAETFCLNCGILALDEPTTN 1139
            LA+ F   C ILALDEPTTN
Sbjct: 1199 LAKAF--GCSILALDEPTTN 1216



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 28/239 (11%)

Query: 30  MDREVPALMGVSKAILENVIFVHQDEANWPLQ-DPSTLKKKFDDIFSATRYTKALEVIKK 88
           +++++P L+G+ KAILENVIF  Q +  WP++ +   LK +FD IF +  Y  A+  IK+
Sbjct: 135 VEQQIPRLLGIPKAILENVIFCQQTDQCWPIELNDKDLKLRFDTIFGSDNYESAIGQIKE 194

Query: 89  LHKDQAQEI-----------KTYKLKLENLQTLKDAAYKLRESISQDQEKTE-------- 129
           L K++ +E+           K Y+ K++N +   D   K RE    +QEK E        
Sbjct: 195 LKKNKDKELVQLQKEEINYNKDYEQKVKNEE---DLLKKTREINEIEQEKKEIDVDLTRL 251

Query: 130 -ALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALA 188
             + + ++E +  I+D+++ I   E  LK +++  D       R        +   A+L 
Sbjct: 252 HQIADNIEEKQGKIKDLENVISQKEGQLKIIKESIDSFEMNHERVQMTISSCEDLKASLE 311

Query: 189 EEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNL 247
            E++   E +   K+  E     ++ D  +++RE  +   K+K L+   + +  E TN 
Sbjct: 312 SELQSNRETINLAKSQIEM----KKHDYERVKREITERTQKLKDLKSKSENFNFEKTNF 366


>gi|49901446|gb|AAH76425.1| Im:6906849 protein, partial [Danio rerio]
          Length = 409

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 162/293 (55%), Gaps = 2/293 (0%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  I    GEKV LS +CA++DRE+ + +GVS+A+L +VIF HQ+E+NWPL 
Sbjct: 110 EFKTLEGVITRIK--HGEKVSLSSKCAEIDREMISSLGVSRAVLNHVIFCHQEESNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESI 121
           +   LK+KFD+IFSATRY K LE ++ L + Q   +K+ +++L+ L+  KD A ++RE +
Sbjct: 168 EGKALKQKFDEIFSATRYIKVLETLRTLRQKQTNTVKSCQMELKYLKQNKDKAQEIRELL 227

Query: 122 SQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQ 181
           S  + +  + K  +  +E  I  ++ +++  E +L  + K+ + I  + +R+  + +  +
Sbjct: 228 STKETQLASSKESVNRIEGQIDPLERRLNDIESSLGKVMKLDNDIKALDSRKKQMEDDNR 287

Query: 182 KQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYT 241
           +    + +  + +D++L++   N +  V ++E  + + +RE      + + + +      
Sbjct: 288 ELEEKMEQVFQGSDDQLQDMYQNHQRTVKEKEKRLVECQRELERAGRECQRMNRIKSELL 347

Query: 242 AEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLPNAPFSNEAALNFINRI 294
            E   L  EA  H   + +RD+ ++ L +   L      P S     +F  +I
Sbjct: 348 VEQGRLQLEADRHTQNIKKRDTQVKTLASFLELEGYDRTPLSERQLQSFYRQI 400


>gi|402467932|gb|EJW03151.1| hypothetical protein EDEG_02456 [Edhazardia aedis USNM 41457]
          Length = 1457

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 125/203 (61%), Gaps = 9/203 (4%)

Query: 1007 DIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQ 1066
            + +K ++   ++L+T ++   D  +    ++K +  +H   M E+N  +++LW  TY+G 
Sbjct: 1263 NTEKIYYKAYLELETLKLIKSDTLKCLQEIEKRIKEYHEEMMLEVNSKLKDLWVNTYQGN 1322

Query: 1067 DIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 1126
            DIDYI+I +D      ++ +Y +++   + +L+M+GR SAGQK+LA +++R+AL + F  
Sbjct: 1323 DIDYIQIDTD---INEKTLNYTLVLVKNNTKLDMKGRSSAGQKMLACILVRIALCDVFSN 1379

Query: 1127 NCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHA 1186
            +  +LALDEPTTNLD  N E+LA  ++ +++    + N Q ++ITHD RFA++I   +  
Sbjct: 1380 DFRVLALDEPTTNLDNNNVEALAITINNVIK----KCNLQFVLITHDFRFAKMIDNSE-- 1433

Query: 1187 EKYYRVAKDDHQHSIIEAQEIFD 1209
            E  Y V +D++  S I  + I D
Sbjct: 1434 ETVYHVIRDENGDSCIFKKSIHD 1456


>gi|254972108|gb|ACT98282.1| rad50-like protein [Schmidtea mediterranea]
          Length = 112

 Score =  136 bits (342), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 71/111 (63%), Positives = 86/111 (77%), Gaps = 6/111 (5%)

Query: 1048 MEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGT----RSYSYKVLM--QTGDAELEMR 1101
            M EINKI++ELW+ TY G+DIDYI I SD E +G     R+Y+Y+V+M  +   A L+MR
Sbjct: 1    MAEINKILKELWRNTYNGEDIDYIEICSDEESSGASTKRRTYNYRVVMVKRHNGARLDMR 60

Query: 1102 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL 1152
            GRCSAGQKVLA L+IRLALAE FCL+CG+LALDEPTTNLD  N  SLA +L
Sbjct: 61   GRCSAGQKVLACLLIRLALAEVFCLHCGVLALDEPTTNLDEENIASLAHSL 111


>gi|298712757|emb|CBJ33353.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 442

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 111/177 (62%), Gaps = 8/177 (4%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +++KA++ V++T N  +G+ V ++++C +MD+ +P  +GVSKAILENV+F HQ++A+WPL
Sbjct: 108 LQFKALDGVIRTKN-ESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPL 166

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           Q+ + +KKKFDDIF + RYTKAL+ IKK  ++ A  +K  K+ L  LQ    AA  L+E 
Sbjct: 167 QEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEE 226

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLF 177
           +    E    L+ +       I+ ID +      +L+ LR + D++  +  R+ +L 
Sbjct: 227 MDASTETYSTLRQE-------IEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLL 276


>gi|431892675|gb|ELK03108.1| DNA repair protein RAD50 [Pteropus alecto]
          Length = 131

 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 79/107 (73%)

Query: 1094 GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALH 1153
            G A LE +       +VLASLIIRLALAETFCLNCGILALDEPTTNLD  N ESLA AL 
Sbjct: 10   GPASLENKPESFHCAQVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALV 69

Query: 1154 RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHS 1200
             I++ R  Q NFQL+VITHDE F +L+G+ ++ EK+YR+ K+  Q S
Sbjct: 70   EIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCS 116


>gi|390346714|ref|XP_003726611.1| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
           purpuratus]
          Length = 440

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 164/310 (52%), Gaps = 30/310 (9%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E+K++E  +  ++ + G+K  +S RCA++DRE+   +GVSK +L NVIF HQ++ANWPL
Sbjct: 109 IEFKSLEGTILRVD-NFGDKHSISSRCAEIDREMVESLGVSKPVLSNVIFCHQEDANWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            D  TLK KFD+IF+ATRY KALE I+KL  +Q+ +I+ Y L+  +L+  ++ A +L   
Sbjct: 168 SDGKTLKGKFDEIFAATRYIKALETIRKLRTEQSGQIREYILETRHLKDWREKAKQLSRE 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           +   + + EA        E S+  I+D++   E    DL +   QI+ + A     +E +
Sbjct: 228 LDDKKARLEA-------AEGSVTKINDQLKPVEEQYDDLVRKSYQITKL-ANEVAKYEGE 279

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEG-------IVAKRESDISKLEREKNDMDTKIKFL 233
           + Q     + +ED  E +      F+G       I +  +S I++ E +  + + K + L
Sbjct: 280 KDQLIKGMKSVEDQLETI------FQGSVDELRRIYSAHQSKITEKEHQLQENEGKKRIL 333

Query: 234 EQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFAR--------HNLGSLPNAPFSNE 285
           +++    ++E + LL   G       ++  TI++   R        H LG      F++ 
Sbjct: 334 QESAQRTSSEKSKLLVIQGVLQQEAQQQQETIRRRDHRMRGLATQLHLLGYSETGEFTSS 393

Query: 286 AALNFINRIR 295
            A +F+  ++
Sbjct: 394 RAGDFMEEVK 403


>gi|344246901|gb|EGW03005.1| DNA repair protein RAD50 [Cricetulus griseus]
          Length = 376

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 147/266 (55%), Gaps = 8/266 (3%)

Query: 36  ALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQ 95
           + +GVSKA+L NVIF HQ+++NWPL +   LK+KFD+IFSATRY KAL+ ++++ + Q Q
Sbjct: 3   SCLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQ 62

Query: 96  EIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELT 155
           ++K  + +L+ L+  K+ A ++R+ I+  + +  + +  ++  E  ++ + +++   E  
Sbjct: 63  KVKECQTELKYLKQNKEKACEIRDQITSKEAQLASSQEIVKSYENELEPLKNRLKEIEHN 122

Query: 156 LKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGIVAK 211
           L  + ++ ++I  + +R+    +Q +K  + L +++E     TDE+L +  +N +  V +
Sbjct: 123 LSKIMRLDNEIKALDSRK----KQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVRE 178

Query: 212 RESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFAR 271
           +E  +   +RE   ++ + + L Q       E   L  +A  H   +  RDS IQ L A 
Sbjct: 179 KERRLVDCQRELEKLNKEARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAH 238

Query: 272 HNLGSLPNAPFSNEAALNFINRIRSR 297
             L      PFS+    NF   +R R
Sbjct: 239 LELDGFERGPFSDRQIKNFHELVRER 264


>gi|47157030|gb|AAT12390.1| RAD50-like DNA repair protein-like protein [Antonospora locustae]
          Length = 120

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 85/123 (69%), Gaps = 3/123 (2%)

Query: 1085 YSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPN 1144
            Y+Y+V M     EL+MR R SAGQKV+AS++IRLALAETF  NC  +ALDEPTTNLD  N
Sbjct: 1    YNYRVCMVKNGCELDMRSRSSAGQKVVASILIRLALAETFTGNCSFMALDEPTTNLDQEN 60

Query: 1145 AESLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
             ESLAA L  ++E RK +  FQLIVITHDE F +L+      + YY++ ++    S++E 
Sbjct: 61   IESLAATLTSLIE-RKRESGFQLIVITHDEHFVRLLC--TSCDMYYKLRRNARGDSVVEK 117

Query: 1205 QEI 1207
            Q I
Sbjct: 118  QFI 120


>gi|405962729|gb|EKC28378.1| DNA repair protein RAD50 [Crassostrea gigas]
          Length = 403

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 152/277 (54%), Gaps = 1/277 (0%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E K ++ V+   + + GEK  +  +CA++DRE+   +GVSK +LENVIF HQ+++NWPL
Sbjct: 109 IEMKTLDGVITRYDVN-GEKKSIGSKCAEIDREMITSLGVSKPVLENVIFCHQEDSNWPL 167

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            +   LK+KFD IF++TRY KALE I+K+ + Q QE+K YK ++ +L+ LKD + +L   
Sbjct: 168 SEGKALKEKFDAIFASTRYVKALETIRKVKQMQDQELKLYKQEVTHLKQLKDKSEQLEAD 227

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
            ++ + K    +  ++++E  ++ + +K+         + K+Q  I    +  + +    
Sbjct: 228 KNERETKMMVCRESVEKIESKLRPVIEKLDQIGNQSDKIYKIQTSIEKHRSEMNMMENSA 287

Query: 181 QKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            +    +  E + + EEL+     F  +V +R+  + + +    +++ +++ L Q     
Sbjct: 288 TELRGQIKNEFQGSVEELQKKIAEFGNMVQERQETMEQFQMLHKELNKELEKLGQEKGNL 347

Query: 241 TAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSL 277
             E+  L  E+  +   M  RD  I+KL  ++++  L
Sbjct: 348 LMEVGKLEQESERYKENMKRRDDEIKKLSTKYDIEGL 384


>gi|406694678|gb|EKC98002.1| hypothetical protein A1Q2_07799 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1137

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)

Query: 1094 GDAELEMRGRC--SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
             +A+L+  G+   +AGQKVLAS+IIRLALAE+F   CG+LALDEPTTNLD  N  +LA +
Sbjct: 1020 ANADLDKYGKALDNAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLDQENINALAES 1079

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            L  I+ +R+ Q NFQLIVITHDE F Q +      E Y+RV++D  Q S +E Q +
Sbjct: 1080 LAEIIRERRRQANFQLIVITHDEGFLQRLAAHDVLEYYWRVSRDASQKSTLERQRV 1135



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 7/77 (9%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +  K +E +L   + + G       +C++MD EVP L+GVSKAILENVIF HQ+++NWPL
Sbjct: 103 LTMKTLEGLLAKTDGNDG-------KCSEMDEEVPLLLGVSKAILENVIFCHQEDSNWPL 155

Query: 61  QDPSTLKKKFDDIFSAT 77
            +P+ LKKKFDDIF AT
Sbjct: 156 SEPAALKKKFDDIFEAT 172


>gi|401884942|gb|EJT49074.1| hypothetical protein A1Q1_01723 [Trichosporon asahii var. asahii CBS
            2479]
          Length = 1204

 Score =  123 bits (309), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)

Query: 1094 GDAELEMRGRC--SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAA 1151
             +A+L+  G+   +AGQKVLAS+IIRLALAE+F   CG+LALDEPTTNLD  N  +LA +
Sbjct: 1087 ANADLDKYGKALDNAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLDQENINALAES 1146

Query: 1152 LHRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEI 1207
            L  I+ +R+ Q NFQLIVITHDE F Q +      E Y+RV++D  Q S +E Q +
Sbjct: 1147 LAEIIRERRRQANFQLIVITHDEGFLQRLAAHDVLEYYWRVSRDASQKSTLERQRV 1202



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 204/538 (37%), Gaps = 136/538 (25%)

Query: 543  SIDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDE 602
            S+  Y+K+LD  K K+                             C  C+R     E+  
Sbjct: 659  SVKFYKKILDLGKTKKK----------------------------CLGCDRAIHDNEK-- 688

Query: 603  FVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHE 662
                          H +     + N D   ++L++ +    E   L K    VA+  L  
Sbjct: 689  -------------PHFEAYRCSTGNMDEVKEELEQWQT---ELTNLRKHVPSVAQAKL-- 730

Query: 663  LTEELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEIQLWQKQVDDLEYML 722
                L +K     ++  +  QIK +   +E +   VE   +L            DL+ M 
Sbjct: 731  ----LKEK-----EIPDLQRQIKEESAKLETVQTEVEEKAKL---------ATCDLQNMR 772

Query: 723  DSRGQGVRTMEEIQ------------LELSGSLSTKDNLQNELEK--LRDEQRYMENDLS 768
             +     RT+ EI+            L+ SGS+ T + +Q E E+  L  E+ +  N L 
Sbjct: 773  SAATVVTRTVGEIKDLKIDVQRLERDLQGSGSVKTVEEVQREREQSSLSSEKEFKSNAL- 831

Query: 769  NIQIRWHTLREEKVKAANTLRDVKKAEEE-------LEHLMEEKGQLDLDEKLL------ 815
                  HT+REE  + +  L +++  +E+       L+   EE+ +L  + K L      
Sbjct: 832  ------HTVREEISRKSFKLAELRTKQEKRRMDELALKEQQEERSKLQAELKELDAAAAA 885

Query: 816  --------AEASGPLSKEKEKLLSDYNDLKVKLNREYEEQAEQKINFQQEIEMLLKIASK 867
                     EA      E++  L D N ++V   R    Q E K    Q           
Sbjct: 886  ALAPWREKTEAMERFRAERQSALDDAN-VQVDSYRSSATQLESKNRACQ----------- 933

Query: 868  IKEYYDLRKDERFKELQEKKSQSESEVKSCKIRTDEILVELDRFKDIVRNQDQIRRNIED 927
               Y     D + +E + +      E+++       I  ++    D +      R+NI+ 
Sbjct: 934  --TYISEGNDRKLRENEAQIDDLRREIEATSATRAAIDKQVTALNDDISRASGTRKNIKS 991

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGGVSTFETELGKHLLERDRLLSEVNRCQG--- 984
            N++YR   AK+++   E+ S++     I G +    +  K   E   L  E    QG   
Sbjct: 992  NIDYRGEMAKIEEVDKELASID-----IEGAAQARRDFNKKYAE---LSQEETDAQGKWQ 1043

Query: 985  --TMSVYQTNISRNKID-LKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKA 1039
              +  + Q   +R K + L + +Y+DI+K + DQLI+ K  E AN DLD+Y  ALD A
Sbjct: 1044 LASGVLLQMTENRKKAEHLLKTEYRDIEKVYIDQLIKTKMGEHANADLDKYGKALDNA 1101


>gi|67623709|ref|XP_668137.1| RAD50 DNA repair protein-related [Cryptosporidium hominis TU502]
 gi|54659321|gb|EAL37903.1| RAD50 DNA repair protein-related [Cryptosporidium hominis]
          Length = 585

 Score =  119 bits (299), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 82/107 (76%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           +++ +ESVLQT +  +G+   +S++CAD++ +VP L GVS +I+ENV+F HQ+++NWPLQ
Sbjct: 121 QFRVLESVLQTKDEESGQVTSISHKCADINAQVPILFGVSNSIIENVLFCHQEDSNWPLQ 180

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ 108
           D + +KKKFD++F +TRY+KALE+I KL  +  ++IK   L  ENL+
Sbjct: 181 DMAKVKKKFDELFGSTRYSKALELITKLKGEYNKKIKEKALFNENLK 227


>gi|380495103|emb|CCF32653.1| DNA repair protein RAD50, partial [Colletotrichum higginsianum]
          Length = 679

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 240/488 (49%), Gaps = 59/488 (12%)

Query: 4   KAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDP 63
           K +E  L  +  + GE+  +S R A MD  +P  +GVS+AIL+ VIF HQDE+ WP+ +P
Sbjct: 109 KTLEGSL--VYNNNGERTVISSRVAQMDEFIPRELGVSRAILDYVIFCHQDESLWPMSEP 166

Query: 64  STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLK---DAAYK---- 116
           + LKK+FD IF A RYTKA++ +K L K Q +E+   K+  E  +  K   D A K    
Sbjct: 167 AALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELAKLKIFEEQDRINKEKGDRAEKRSMA 226

Query: 117 LRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL 176
           L+  I + +EK  AL  +M++L++ I++  ++ +     + DL+  +DQ   +T R  ++
Sbjct: 227 LQNDIEESREKCNALTLEMEQLQEQIREKHEQANSYLNIVNDLKFKRDQ---LTYREGSI 283

Query: 177 FEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQN 236
            +          EE+ + DE L+N        +A+ E  +++   E N+   +   L+++
Sbjct: 284 AD-----IKMTLEELSEDDEYLEN-------ALAQYEERMARYGEEANENKAQYAELQKD 331

Query: 237 IDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNL--------------GSLPNAPF 282
           ++    E++  L+E G H S   ++D   ++L +R  L              G L +A  
Sbjct: 332 LNQSRRELSTKLAEQGKHQS---DKDKYERQLQSRMQLVRDAAELHGFRGYDGDLKDAQI 388

Query: 283 SNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKME 342
                  F  RI+  L++ +RDL+  +K +   L  A     D       +E +K    +
Sbjct: 389 K-----TFNERIQKLLAEKKRDLDRAQKENARELDEATSVITD-------LEGRKATTTQ 436

Query: 343 IKAGILKHIKEKENERDSFELQISNLNLSH-----IDERENKMRIEVERKTNQLAEREFE 397
            +    + +   +   +  ++ I+ L++       +D +   +   +++    LA  +F+
Sbjct: 437 NRVFAKQRMGAIDKRTNVLQMDINRLDIDEGAKAILDNQFEDVESRLKKANESLAHADFD 496

Query: 398 INIRQKQSELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKD 457
             ++++  +L+ ++ + + L RE       + +R +L L+K EL + ++K + + + +K 
Sbjct: 497 NQLQRENEKLWQLETENEKLGRELMECTRLASERAQLDLRKKELSDRRRKLETLTNTWKP 556

Query: 458 KIRDVLKG 465
           K+ DV  G
Sbjct: 557 KL-DVHVG 563


>gi|291229744|ref|XP_002734833.1| PREDICTED: DNA repair protein RAD50-like [Saccoglossus kowalevskii]
          Length = 407

 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 113/176 (64%), Gaps = 11/176 (6%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E+K +ES L T     GEKV +S +CAD++ E+   +GVSKA+L NVIF HQ+EANWPL
Sbjct: 111 VEFKTLESTL-TRAKDFGEKVQISSKCADLNFEMIGCLGVSKAVLNNVIFCHQEEANWPL 169

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
            +   LK KFD+IF+ATRY K L+ I+K  ++Q   I+ Y+ +++ L+  K+ A +++++
Sbjct: 170 SESKALKTKFDEIFAATRYIKTLDHIRKFKQEQLGSIREYQAEIKYLKQNKEKATEIKDN 229

Query: 121 ISQDQEKTEA-------LKNQMQELEKSIQDIDDK---IHHTELTLKDLRKMQDQI 166
           IS+ + +  A       +K Q++ ++  ++DI  K   I+  E  +++L   ++Q+
Sbjct: 230 ISKAEARLAATTETVNKIKEQLEPVKNKLEDIAQKEGSIYELEKKVENLESGKEQM 285


>gi|119192414|ref|XP_001246813.1| hypothetical protein CIMG_00584 [Coccidioides immitis RS]
          Length = 744

 Score =  114 bits (285), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 90/134 (67%), Gaps = 3/134 (2%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           GE+  +S R A++D+ +P  +GVS+AIL+NVIF HQDE+ WPL +PS LKKKFD+IF A 
Sbjct: 509 GERTSISSRVAELDQIMPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQ 568

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
           +YTKA++ IK L K Q +E+  YK+  +  +  KD A +  +   Q QE+ EAL+ +  E
Sbjct: 569 KYTKAIDNIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHE 628

Query: 138 LEKSIQ---DIDDK 148
           L K ++   D+ DK
Sbjct: 629 LSKEMKKAADLADK 642


>gi|320031598|gb|EFW13558.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 322

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 90/134 (67%), Gaps = 3/134 (2%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           GE+  +S R A++D+ +P  +GVS+AIL+NVIF HQDE+ WPL +PS LKKKFD+IF A 
Sbjct: 179 GERTSISSRVAELDQIMPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQ 238

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQE 137
           +YTKA++ IK L K Q +E+  YK+  +  +  KD A +  +   Q QE+ EAL+ +  E
Sbjct: 239 KYTKAIDNIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHE 298

Query: 138 LEKSIQ---DIDDK 148
           L K ++   D+ DK
Sbjct: 299 LSKEMKKAADLADK 312


>gi|345489328|ref|XP_001600265.2| PREDICTED: DNA repair protein RAD50-like [Nasonia vitripennis]
          Length = 1363

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 108/167 (64%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           ++++A+++ +  ++  T +K+ ++ RC+D+DRE+ A MGVSK IL  VIF HQ+E+NWPL
Sbjct: 110 LKFQALDNTITRLDARTKDKIQITNRCSDIDREMLAAMGVSKPILNYVIFCHQEESNWPL 169

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRES 120
           +D   LK +FD+IF  ++Y KA++ I KL KD   EI T K + E  + + + A      
Sbjct: 170 EDGKKLKDRFDEIFDTSKYNKAMDTITKLIKDLNSEINTLKAREEAFKEILNEAEDQESK 229

Query: 121 ISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQIS 167
           +  ++++ + +++++  +++S+  +++++        D +K++DQ++
Sbjct: 230 LRNNEQREKEVQDKITVIDQSVVPLEERMKQILDVKSDYQKLEDQLN 276


>gi|12857523|dbj|BAB31030.1| unnamed protein product [Mus musculus]
          Length = 214

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 81/107 (75%), Gaps = 2/107 (1%)

Query: 2   EYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQ 61
           E+K +E V+  +  H GEKV LS +CA++DRE+ + +GVSK++L NVIF HQ+++NWPL 
Sbjct: 110 EFKTLEGVITRMK-H-GEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLS 167

Query: 62  DPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQ 108
           +   LK+KFD+IFSATRY KAL+ ++++ + Q Q++K  + +L+ L+
Sbjct: 168 EGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLK 214


>gi|302851366|ref|XP_002957207.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f.
           nagariensis]
 gi|300257457|gb|EFJ41705.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f.
           nagariensis]
          Length = 178

 Score =  109 bits (272), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/79 (59%), Positives = 67/79 (84%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +++K++++VL   N +TG++  ++YRCAD+DR VP LMGVSKA+LENVIFVHQ+E+NWPL
Sbjct: 100 LQFKSLDAVLSCRNRNTGQRESVTYRCADLDRMVPTLMGVSKAVLENVIFVHQEESNWPL 159

Query: 61  QDPSTLKKKFDDIFSATRY 79
            +   LK+KFDDIF+AT+Y
Sbjct: 160 AEGKVLKEKFDDIFAATKY 178


>gi|198427247|ref|XP_002124412.1| PREDICTED: similar to arsA arsenite transporter, ATP-binding, homolog
            1, partial [Ciona intestinalis]
          Length = 1106

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 179/787 (22%), Positives = 348/787 (44%), Gaps = 91/787 (11%)

Query: 54   DEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDA 113
            +E+NWPL +  ++K+KFDDIF+ATRY KALE I+K+ K Q  +++  K++  +L+   + 
Sbjct: 340  EESNWPLSEGKSVKQKFDDIFAATRYIKALEEIRKVQKSQKADLRDNKVESTHLKVHCEG 399

Query: 114  AYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARR 173
            A + R ++   + K +A K  ++++ + I+ ++  I         +  M  Q+    +R 
Sbjct: 400  AAEKRRNLQTTETKLQASKVSVEKITQQIKPLETHIIELRGKQSKIEVMSGQVEATKSRL 459

Query: 174  STLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFL 233
              + + ++K  + +      TDE+L   +N+ E IV ++ S     ER+   ++ +I   
Sbjct: 460  QQMLDDEKKLKSRIKNTFHGTDEQLAQLQNDQEKIVDRKRSQQLDCERQLQPLEEQINDF 519

Query: 234  EQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKLFARHNLGSLP--NAPFSNEAALNFI 291
             +    Y+ E   L         +   RD  I+     +N+ SLP   +  S++ A  F+
Sbjct: 520  SKQKMKYSVEQGKLQQVVKNAEEQRKHRDELIRGSSEEYNI-SLPYIGSDLSSQEATTFL 578

Query: 292  NRIRS-------RLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIK 344
            +  ++       +L  L+  L+ ++   E + + +W   ++  +  K+++       E K
Sbjct: 579  HLFQTHADSEENKLQSLKIRLDGEQNKVEESYQESWQMKVELEEGNKHLKKNLMELKEKK 638

Query: 345  AGILKHIKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQLAEREFEINIRQKQ 404
            A   + +   ++  D+ +L +    L   +++  K    VER +NQ+ E +  I ++ K 
Sbjct: 639  ARTTRDLNRLQSAADNGQLDVLQNQLQQAEDQLKK----VER-SNQVEEMKGTIIVKNK- 692

Query: 405  SELFAMDQKIKALNREKDVLAGDSEDRVKLALKKAELENHKKKHKKIIDEYKDKIRDVLK 464
             E+  + Q++K L+ +   +   SE R KL + K +    KK  + +ID+ K        
Sbjct: 693  -EMIVLQQQVKQLDADIYSMQKSSEIRTKLEMMKKQ----KKSKEDLIDQLK-------- 739

Query: 465  GRLPLDRDLKKEITQALRALLTEFDD-------LSSKSREADKEVNMLQMKIQEVTDNLS 517
                  R  ++ + +   A  + F D       + SK  E     +    K  E T+  S
Sbjct: 740  ------RKCQRHLEELGLASHSSFPDKMKMMRWIRSKEEEVRSSRDHFDRKRSEFTE-FS 792

Query: 518  KHRKDVDSKKRFIESKLESLNQQIFSI----DTYQKVLDSAKEKRDVQKSKYNIADGMRQ 573
              +K V ++ +  + + E LN+ ++ +    D  Q +    KE +++Q SK  +ADG++ 
Sbjct: 793  TKKKMVSNQIKEKKKREEKLNETLYDVCGSDDLEQDLTQLDKEIKELQGSK-GLADGIQY 851

Query: 574  MFDPF-----ERVARAHHVCPCCERPF-SAEEEDEFVKKQRVKAASSAEHMKVLSLESSN 627
            M+  F         ++   CP C R F    E DE V+  + K   + E +     + ++
Sbjct: 852  MYREFIKKLTNETDKSEAACPICMRCFEETSEVDELVEDLQTKLNMAPEKLASQKRQLTS 911

Query: 628  ADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD 687
              + ++ L   + +  E  +L    +P  E+               F  V   ++  + D
Sbjct: 912  KQARYKVLLDNKPIKMELDRLQTSDLPDLER--------------TFTSVSSKISDAEKD 957

Query: 688  KESVEVLVQPVE----TADRLFQEIQLWQKQVDDLEYMLDSRGQGVRTMEEIQLELSGSL 743
             E  E   Q ++    TA RL  ++        DLE + +  G     M E QL L+ S 
Sbjct: 958  LEEAEERWQKIKEEESTAKRLLPDVSQIHSLQSDLEEIEEKIG-----MHETQLPLNSST 1012

Query: 744  ST-------KDNLQNELEKLR---DEQRYM----ENDLSNIQIRWHTLREEKVKAANTLR 789
             T       K NL   + KL    D+ R+M     N L  ++ + + ++ EK+K A  L+
Sbjct: 1013 KTLDQMNMDKGNLSQAISKLNQEIDDLRHMIETKTNFLHQMKEKVNNIQAEKLKLAADLQ 1072

Query: 790  DVKKAEE 796
              ++ +E
Sbjct: 1073 KCEQLQE 1079


>gi|209946150|gb|ACI97306.1| RAD50 [Drosophila yakuba]
          Length = 633

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 34/243 (13%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 87  SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 146

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 147 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKVKEANMKHVAYLKQEMEVK 206

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ Q Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 207 TLNLQQAQRKCDAIKAQCSECEEEMKPIEARLMEIRNVEFEIGKYQAQKVEMDTKHKNCK 266

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +   LF         LAE     D+E+ N+    + +  KR   E D+S+++
Sbjct: 267 DQISTLTGKIKNLF------GGTLAE----LDQEISNFDQRMQEVHQKRTVVEGDLSQIK 316

Query: 221 REK 223
           R K
Sbjct: 317 RSK 319


>gi|195488694|ref|XP_002092422.1| GE14184 [Drosophila yakuba]
 gi|194178523|gb|EDW92134.1| GE14184 [Drosophila yakuba]
          Length = 1303

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 34/243 (13%)

Query: 5   AIESVLQTINPHTG-------EKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEAN 57
           + E++  TIN  TG       ++  LS R  D+D  +   MGVSKAI+ NV+F HQ++++
Sbjct: 111 SFETMDSTINFLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSS 170

Query: 58  WPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKL 117
           WPL +   LK+KFD IF  T Y KAL+ I KL K+  +E+K  +  ++++  LK      
Sbjct: 171 WPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKVKEANMKHVAYLKQEMEVK 230

Query: 118 RESISQDQEKTEALKNQMQELEKSIQDIDDK---IHHTELTLKDL-----------RKMQ 163
             ++ Q Q K +A+K Q  E E+ ++ I+ +   I + E  +              +  +
Sbjct: 231 TLNLQQAQRKCDAIKAQCSECEEEMKPIEARLMEIRNVEFEIGKYQAQKVEMDTKHKNCK 290

Query: 164 DQISTMTARRSTLFEQQQKQYAALAEEIEDTDEELKNWKNNFEGIVAKR---ESDISKLE 220
           DQIST+T +   LF         LAE     D+E+ N+    + +  KR   E D+S+++
Sbjct: 291 DQISTLTGKIKNLF------GGTLAE----LDQEISNFDQRMQEVHQKRTVVEGDLSQIK 340

Query: 221 REK 223
           R K
Sbjct: 341 RSK 343


>gi|340370826|ref|XP_003383947.1| PREDICTED: DNA repair protein RAD50-like [Amphimedon queenslandica]
          Length = 818

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 67/93 (72%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           +E K +E  L   +  TGEK+ +S RC +++ E+   +GVSKAIL +VIF HQ+++NWPL
Sbjct: 109 IEQKQLEGSLVREDKVTGEKIKVSARCIEINTEMACNLGVSKAILNHVIFCHQEDSNWPL 168

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQ 93
            +   LK KFD+IF++TRY+KALE IKK  KDQ
Sbjct: 169 SEGKALKTKFDEIFASTRYSKALENIKKFQKDQ 201


>gi|260948944|ref|XP_002618769.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720]
 gi|238848641|gb|EEQ38105.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720]
          Length = 1277

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 2/144 (1%)

Query: 3   YKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           +K +E  L  +    G K  LS + A++D  VP  +G S+A+LE VIF HQD++ WPL +
Sbjct: 112 FKTLEGQLAVM--ARGHKTALSTKNAELDARVPQYLGASRAVLEYVIFCHQDDSLWPLSE 169

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
              LKK+FD+IF A+R+TK L+ IK L KD A +I+  +  + + Q  +  A K+R+ ++
Sbjct: 170 AGVLKKRFDEIFEASRFTKVLDTIKTLRKDMASDIRLIEQSVHHAQVDQARARKIRDKLA 229

Query: 123 QDQEKTEALKNQMQELEKSIQDID 146
               + E    Q+ +L   I+ ++
Sbjct: 230 ASTAQAEQYTGQIADLTVQIERLE 253


>gi|256072122|ref|XP_002572386.1| DNA repair protein RAD50 [Schistosoma mansoni]
 gi|353231874|emb|CCD79229.1| putative dna repair protein RAD50 [Schistosoma mansoni]
          Length = 1282

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 131/238 (55%), Gaps = 21/238 (8%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G    +S RC D+D+E+   +GVSKA+LENVIF HQ+++NWPLQ+  ++K++FDD+F+++
Sbjct: 126 GRVTSVSLRCTDLDQEMVTSLGVSKAVLENVIFCHQEDSNWPLQEAKSVKQRFDDLFASS 185

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLR-ESISQDQEKTEALKNQMQ 136
           RY KAL+ I+K  +D  +  +  +  L +  T+K+    ++ E    D+E    +++   
Sbjct: 186 RYVKALDAIRKCKQDNDESCEAERAHLTD--TIKNLMLNIQNEYQGSDEELKRLIEDAET 243

Query: 137 ELEKSIQDIDDKIHHTELTLKDLRKMQDQISTM-TARRSTLFEQQQKQYAA--LAEEIED 193
           E EK I      ++ +E  L++ RK   ++ST+ T +  T+ E+ Q +     L E I +
Sbjct: 244 EYEKKIF----LLNKSENILQNKRK---ELSTLETNQTKTIVEKTQIEMEVKRLNEAIIN 296

Query: 194 TDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEA 251
            D  L +   N+  I   + +D+ +        D  ++++ Q +D    E  N L+E 
Sbjct: 297 RDMILASIVTNY--IPGNKYADVKQF------TDADVEYIMQFVDGLLHESENQLTEV 346


>gi|71652374|ref|XP_814845.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener]
 gi|70879853|gb|EAN92994.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
          Length = 1346

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 84/129 (65%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TG+ +  +YR  D+DR VP ++GVS A+LE+VIF HQ++ANWPL  P  +KK FD+IF+A
Sbjct: 127 TGKVLSSTYRANDVDRAVPEMLGVSPAVLEHVIFCHQEDANWPLLPPKEVKKIFDEIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ +++  K+  ++ K ++  L  L+  ++ A +L   I+  +E    ++ + +
Sbjct: 187 TRYVLALDRLRENSKEFRRQQKEHEANLMALREHREQAQQLTGDIAAKEELVRTIQQRSK 246

Query: 137 ELEKSIQDI 145
            LE  ++++
Sbjct: 247 SLEPQLKEL 255


>gi|71409626|ref|XP_807148.1| RAD50 DNA repair protein [Trypanosoma cruzi strain CL Brener]
 gi|70871085|gb|EAN85297.1| RAD50 DNA repair protein, putative [Trypanosoma cruzi]
          Length = 675

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 83/129 (64%)

Query: 17  TGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSA 76
           TG+ +  +YR  D+DR VP ++GVS A+LE+VIF HQ++ NWPL  P  +KK FD+IF+A
Sbjct: 127 TGKVLSSTYRANDVDRAVPEMLGVSPAVLEHVIFCHQEDTNWPLLPPKEVKKIFDEIFAA 186

Query: 77  TRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQ 136
           TRY  AL+ +++  K+  ++ K ++  L  L+  ++ A +L   I+  +E    ++ + +
Sbjct: 187 TRYVLALDRLRENSKEFRRQQKEHEANLMALREHREQAQQLTGDIAAKEELVRTIQQRAK 246

Query: 137 ELEKSIQDI 145
            LE  ++++
Sbjct: 247 SLEPQLKEL 255


>gi|403221740|dbj|BAM39872.1| DNA repair protein Rad50 [Theileria orientalis strain Shintoku]
          Length = 991

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 8/141 (5%)

Query: 1   MEYKAIESVLQTINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPL 60
           + +KA +S L  I    G    LS +   MD  VP+ MG+S+A+L+NVIF HQDE NWPL
Sbjct: 120 LTFKATDSTLD-ITSADGNLRTLSLKSTQMDTTVPSYMGMSRALLDNVIFCHQDENNWPL 178

Query: 61  QDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLE-------NLQTLKDA 113
           +D S +K +FDD+     +TKAL+ + K  K+Q   I +   KLE        + TL+  
Sbjct: 179 EDASKIKARFDDLLETAGFTKALQSLSKARKEQETYILSLNSKLEAHKQEIIRIDTLRKK 238

Query: 114 AYKLRESISQDQEKTEALKNQ 134
              +++ I + + + E+LKN+
Sbjct: 239 WNVIKDEIDRIKREQESLKNK 259


>gi|402587270|gb|EJW81205.1| hypothetical protein WUBG_07886, partial [Wuchereria bancrofti]
          Length = 513

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 37/281 (13%)

Query: 12  TINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFD 71
            I   +GE   LS +  D  +E+  L+G+  AILE V+F HQ+E++WPL +P  LK++FD
Sbjct: 127 AIEKESGEWKSLSSKVVDCKKEILNLLGLPTAILEYVVFCHQEESSWPLDEPKKLKERFD 186

Query: 72  DIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTE-- 129
           +IF  T Y KA+EV++K  K+  QE++  + +L  L             I Q +EK E  
Sbjct: 187 EIFQVTGYVKAIEVLRKEFKENQQELRITEGRLPLL-------------IRQQEEKIELH 233

Query: 130 ----ALKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYA 185
                LK Q+ + EK I  ++  +       K+L+  +   + M  R+  + E + +   
Sbjct: 234 NEYITLKEQVAKNEKEIL-LNQSVLKENTAKKNLKVAELDKAEMLKRKHDMMEAEMQ--- 289

Query: 186 ALAEEIE-----DTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAY 240
            L +++E     D +  ++N K   E I    E     +ER +  +  +I  L + I  Y
Sbjct: 290 VLVDQVECCSALDYEGGIENLKREIESITHSDE--FEDMERNRKRISAEIDELNEEIKEY 347

Query: 241 TAE-------ITNLLSEAGAHMSRMNERDSTIQKLFARHNL 274
            A+       +  L S          ER   +Q  ++R NL
Sbjct: 348 VAKKKEIDKAVVQLKSVQMMRDKMTVERKQCLQTCWSRFNL 388


>gi|393909325|gb|EJD75407.1| Rad50 family protein [Loa loa]
          Length = 1137

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 145/631 (22%), Positives = 276/631 (43%), Gaps = 98/631 (15%)

Query: 12  TINPHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFD 71
            I    GE   LS +  D  +E+  L+G+  AILE V+F HQ+E++WPL +P  LK++FD
Sbjct: 206 AIEKEPGEWKSLSSKVVDCRKEILNLLGLPTAILEYVVFCHQEESSWPLDEPKKLKERFD 265

Query: 72  DIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEA- 130
           +IF  T Y KA+E+++K  K+  QE++  + +L  L             I Q +EK E  
Sbjct: 266 EIFQVTGYVKAMEILRKELKENQQELRIIEGRLPLL-------------IRQQEEKIELH 312

Query: 131 -----LKNQMQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYA 185
                LK Q+ E EK I  +   +   +   K+L+  +   + M  ++  + E +++   
Sbjct: 313 NEYINLKGQVAENEKEIL-LKQTVLKEDTAKKNLKIAELDEAEMLKKKRDMMEAEKQ--- 368

Query: 186 ALAEEIEDTDEELKNWKNNFEGIV--AKRESDISKLEREKNDMDTKIKFLEQNIDAYTAE 243
            L ++IE           ++EG +   KRE ++     E  DM+   K +   ID  +AE
Sbjct: 369 VLLDQIECC------LALDYEGGIENLKREIELINHSDEFEDMERNRKRINAEIDELSAE 422

Query: 244 ITNLLSEA----GAHMSRMNERDSTIQKLFARHNLGSLPNAPFSN---------EAALNF 290
           I   +++           + ER+  ++    R NL +                 E   NF
Sbjct: 423 IKEYVAKKKEIDKMRCKMIAEREQCLETYCLRFNLRNEQTGILKQLHHLIEKRKEEISNF 482

Query: 291 INRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKH 350
            NR+  + ++ +++++D                           AQ  AK+E++    K 
Sbjct: 483 KNRMEEKQTNCQKEVDD----------------------ISGTLAQVSAKIELRNEECKR 520

Query: 351 IKEKENERDSFELQISNLNLSHIDERENKMRIEVERKTNQL---AEREFEINIRQKQSEL 407
           +     E+D    + + +  ++  ++ ++++ E+ ++ N+L    E+E E N+   ++E 
Sbjct: 521 L-----EKDIAAAKCNLMEAANSSDKLDRLQEEILKQENELDVMREKELENNVDDLKNER 575

Query: 408 FAMDQKIKALNREKDVL--AGDSEDRVK-----LALKKAELENHKKKHKKIIDEYKDKIR 460
             +  +I+ L +E  +   A   E+++K     L   + EL   K+KH+  + E    I 
Sbjct: 576 DGIANRIELLKKEYCMRENAEGIENKIKQRSVELVKFEKELNILKEKHQIALLE----IF 631

Query: 461 DVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKSREADKEVNMLQMKIQEVTDNLSKHR 520
              +   PL   L     +A ++L T  D+     +  +KEV+  Q  I ++   +    
Sbjct: 632 STKEPEFPLSERLTIYARKAEQSLSTAEDEF----KICEKEVSRAQFAISQIDREMDYLS 687

Query: 521 KDVDSKKRFIESKLESLNQQIFS-IDTYQKVLDSAKEKRDVQKSKYNIADGMRQMFDPFE 579
             + S +R I   + +   ++ + +D  + +L      R  Q+    I DG   +++ +E
Sbjct: 688 DQIGSYRRKITQVIVTHENEVETRLDEIRTLL------RKSQQDSGRI-DGCMFLYEQWE 740

Query: 580 RVARAHHVCPCCERPFSAEEEDEFVKKQRVK 610
                   CP CE  +S+  E   V K+++K
Sbjct: 741 EEVVMRKCCPLCEHSYSS-TEGPVVLKEKIK 770


>gi|17563838|ref|NP_506070.1| Protein RAD-50, isoform a [Caenorhabditis elegans]
 gi|68062283|sp|O44199.1|RAD50_CAEEL RecName: Full=DNA repair protein rad-50
 gi|2687855|emb|CAA99730.1| RAD50 homologue ceRAD50 [Caenorhabditis elegans]
 gi|4008379|emb|CAB01581.1| Protein RAD-50, isoform a [Caenorhabditis elegans]
          Length = 1298

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 7/148 (4%)

Query: 23  LSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 82
           LS +  D +  +   +GV +A+ + VIF HQ+++ WPL +P  LKK+FDDIF  T++ KA
Sbjct: 128 LSSKVCDFNTALLKHLGVPRAVFKYVIFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKA 187

Query: 83  LEVIKKLHKDQAQEIKTYKLKLENLQT-LKDAAY------KLRESISQDQEKTEALKNQM 135
            E +KK+  D  +E++T+++  +  +T ++D         +    IS+ +E+T+ LK + 
Sbjct: 188 QERMKKIVLDFKKEMQTHEMSKQLYETHVRDKLVARQNQEECERKISKRKEETDELKERK 247

Query: 136 QELEKSIQDIDDKIHHTELTLKDLRKMQ 163
              +K I+++   IH  E TL   +K +
Sbjct: 248 ANGQKKIEEMRTSIHELEDTLTSFKKTE 275


>gi|193208595|ref|NP_001122999.1| Protein RAD-50, isoform b [Caenorhabditis elegans]
 gi|148472886|emb|CAN86608.1| Protein RAD-50, isoform b [Caenorhabditis elegans]
          Length = 1312

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 7/148 (4%)

Query: 23  LSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKA 82
           LS +  D +  +   +GV +A+ + VIF HQ+++ WPL +P  LKK+FDDIF  T++ KA
Sbjct: 142 LSSKVCDFNTALLKHLGVPRAVFKYVIFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKA 201

Query: 83  LEVIKKLHKDQAQEIKTYKLKLENLQT-LKDAAY------KLRESISQDQEKTEALKNQM 135
            E +KK+  D  +E++T+++  +  +T ++D         +    IS+ +E+T+ LK + 
Sbjct: 202 QERMKKIVLDFKKEMQTHEMSKQLYETHVRDKLVARQNQEECERKISKRKEETDELKERK 261

Query: 136 QELEKSIQDIDDKIHHTELTLKDLRKMQ 163
              +K I+++   IH  E TL   +K +
Sbjct: 262 ANGQKKIEEMRTSIHELEDTLTSFKKTE 289


>gi|313231327|emb|CBY08442.1| unnamed protein product [Oikopleura dioica]
          Length = 1335

 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 15/177 (8%)

Query: 4   KAIESVLQTINPHTGEKVCLSY-RCADMDREVPALMGVSKAILENVIFVHQDEANWPLQD 62
           K++E  +   +  +GE +     +  ++++ +  L+GV+K +LE  +F HQDE  WP ++
Sbjct: 117 KSLEGTITVKDKRSGEIISSKVQKVEELNKHIRGLLGVNKPVLEYAVFCHQDETLWPFEE 176

Query: 63  PSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIS 122
              LK KFD+IF +  Y K+LE IKK +K+ + EI   K      +  +   Y++ E   
Sbjct: 177 AKLLKAKFDEIFQSAEYVKSLEQIKKAYKEASSEIVIMK------ERQRSETYRV-EHFR 229

Query: 123 QDQEKTEALKNQMQELEKSIQDIDDKIHHTE-------LTLKDLRKMQDQISTMTAR 172
           + +E+   L  ++ E  K IQ +D+++   E         L+D R   + + ++ AR
Sbjct: 230 KQKERENKLTIEVAEARKEIQTLDEQLDKVEEEEDQCATVLRDQRNKMEAVKSLQAR 286


>gi|268557426|ref|XP_002636702.1| C. briggsae CBR-RAD-50 protein [Caenorhabditis briggsae]
          Length = 1354

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 36/239 (15%)

Query: 18  GEKVCLSYRCADMDREVPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSAT 77
           G    LS +  D ++ +   +GV KAI + VIF HQ+++ WPL +P  LK +FD+IF  T
Sbjct: 182 GTTQTLSSKVCDFNKAILHHLGVPKAIFKYVIFCHQEDSTWPLSEPKELKNRFDEIFQLT 241

Query: 78  RYTKALEVIKKLHKDQAQEIKTYKLKLENLQTL---KDAAYKLRE----SISQDQEKTEA 130
           ++ +A E ++K+  D A+E+ T+++  +  ++    K +A K+R+     I + +E T  
Sbjct: 242 KFVRAQERMRKIVGDFAKELNTHEVSKQLYESHIKEKLSARKIRDDCVKKIEKGKEATSD 301

Query: 131 LKNQ-------MQELEKSIQDIDD---KIHHTELTLKDLRKMQDQISTMTARRSTLFEQQ 180
           LK +        +EL+  IQ +DD    I   E    +L+K  + I              
Sbjct: 302 LKRKKTQGIKRCEELKIEIQKLDDLSISIKQNEAERGNLKKQMELIRV------------ 349

Query: 181 QKQYAALAEEIEDTDEELKNWKN------NFEGIVAKRESDISKLEREKNDMDTKIKFL 233
            + Y    EE+    EEL +  N        +  +A+   +  +L R K D++ KI  L
Sbjct: 350 -EPYYGTEEELRKQLEELNDGGNYADQRAKIDKRIARNNQERQELSRNKTDLENKISSL 407


>gi|123444611|ref|XP_001311074.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892870|gb|EAX98144.1| hypothetical protein TVAG_332540 [Trichomonas vaginalis G3]
          Length = 755

 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 28  ADMDREVPALMGVSKAILENVIFVHQDEANWPLQ-DPSTLKKKFDDIFSATRYTKALEVI 86
           A++D ++P L G SK+I++NVIF  Q E  WP++   S LK++FD IF    Y KA + I
Sbjct: 128 AEIDFQIPRLFGSSKSIIKNVIFCKQFEQTWPIEMAGSKLKERFDKIFGIEAYNKAHDEI 187

Query: 87  KKLHKDQAQEIK 98
            K  K +  E+K
Sbjct: 188 YKALKSKISELK 199


>gi|20094127|ref|NP_613974.1| SMC1-family ATPase [Methanopyrus kandleri AV19]
 gi|49036452|sp|Q8TXI4.1|RAD50_METKA RecName: Full=DNA double-strand break repair Rad50 ATPase
 gi|19887131|gb|AAM01904.1| SMC1-family ATPase involved in DNA repair [Methanopyrus kandleri
            AV19]
          Length = 876

 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 1103 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQ 1162
            R S G+K++  L +RLALA         + LDEPT +LD  + E LA AL R ++  KG+
Sbjct: 781  RMSGGEKIIIGLALRLALAMVGSSFAPFIMLDEPTVHLDAEHRERLAQAL-RELDLGKGR 839

Query: 1163 ENFQLIVITHDE 1174
               Q IV+THDE
Sbjct: 840  VR-QAIVVTHDE 850



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/247 (19%), Positives = 118/247 (47%), Gaps = 5/247 (2%)

Query: 18  GEKVCLSYRCADMDREV-PALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKF-DDIFS 75
           G KV  S R  D+DREV  AL GV + +    +++ Q E    ++     +K+  D    
Sbjct: 103 GWKVVASGRAEDVDREVMNALGGVDRDVFREAVYIRQGEIAKLVEATREERKRIVDRTLG 162

Query: 76  ATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQM 135
              + KA E   +L +    +++T++ ++ +L+  K    ++   + + + + + L+ ++
Sbjct: 163 LAEFKKAREQAHELLRVAEAKLETFRERVRDLKGSKKELKRVERELEELKREVKELEPEV 222

Query: 136 QELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTL--FEQQQKQYAALAEEIED 193
           +EL++ + ++ +     E    +LR ++++I ++  RR  L    ++ K+     + + D
Sbjct: 223 EELKERLNELREAKREFERLEGELRLLENKIESLKGRRDDLRKLVEEGKEAERELQRLGD 282

Query: 194 TDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGA 253
              +++  +N  E  + +R  ++  L  +   +  +++  E+ ++    E+  L  EAG 
Sbjct: 283 VPSKVRELENE-EAELRRRIEELRNLLDDLRSLRNRLESAEEELEGVKRELEELKDEAGV 341

Query: 254 HMSRMNE 260
              R+ E
Sbjct: 342 DPERLVE 348


>gi|374339075|ref|YP_005095811.1| DNA repair ATPase [Marinitoga piezophila KA3]
 gi|372100609|gb|AEX84513.1| ATPase involved in DNA repair [Marinitoga piezophila KA3]
          Length = 932

 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)

Query: 1084 SYSYKVLMQ---TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNL 1140
            S  Y V+++    GD +  +    S G++V  ++ IR+ALA TF  N     LDEPT+NL
Sbjct: 836  SRDYLVILRDEIKGDRDFSI---LSGGEQVSVAISIRIALA-TFLSNANFYILDEPTSNL 891

Query: 1141 DGPNAESLAAALHRIMEDRKGQENFQLIVITHDERFAQL 1179
            D      LA  L +++++ +     Q  ++THD  F+++
Sbjct: 892  DEERKNLLAENLKKMLKNIE-----QAFIVTHDGTFSEM 925


>gi|167377210|ref|XP_001733242.1| DNA repair protein RAD50 [Entamoeba dispar SAW760]
 gi|165904229|gb|EDR29529.1| DNA repair protein RAD50, putative [Entamoeba dispar SAW760]
          Length = 783

 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 972  RDRLLSEVNRCQGTMSVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMAN-KDLD 1030
            RD L+SEV+  +G + +   NI R K D+ +       +  +D+L   +  E    +DLD
Sbjct: 634  RDTLMSEVSGIEGELKILTDNIFRYKEDINRLNPNGKLETEYDELSIRRIVEKNTIEDLD 693

Query: 1031 RYYNALDKALMRFHTMKMEEINKIIRELW 1059
            +Y  A+ +A+ ++H  KM+EIN II +LW
Sbjct: 694  KYKGAVGRAMTKYHREKMKEINDIINDLW 722


>gi|347524089|ref|YP_004781659.1| SMC domain containing protein [Pyrolobus fumarii 1A]
 gi|343460971|gb|AEM39407.1| SMC domain protein [Pyrolobus fumarii 1A]
          Length = 908

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 168/369 (45%), Gaps = 57/369 (15%)

Query: 481 LRALLTEFDDLSSKSREADKEVNMLQMKIQEVTD---NLSKHRKDVDSKKRFIESKLESL 537
           LR+ L+E++    K REA ++   L+ +++ + +   NL KHR+D+  K R IE  + ++
Sbjct: 332 LRSELSEYE----KMREAYEKAVSLEERVRSLRERLQNLRKHREDLQQKLRDIEQNIAAM 387

Query: 538 NQQIFSI------DTYQKV-------------LDSAKEKRD-VQKSKYNIADGMRQMFDP 577
            +++ +I      D  + V             +DS + + D + + + NI   +  + + 
Sbjct: 388 ARKLLNIRAGVVIDIGEVVSRLASMEEQLKSRIDSMRARIDSLTRERGNIESKIHDIEEN 447

Query: 578 FERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSLESSNADSYFQQLDK 637
             ++A AH  CP C RP   EE  + ++K R +  +  E ++ +  E +      ++L+K
Sbjct: 448 IVKLASAHGRCPLCSRPLRDEERRDLIRKLRFEKEALREKLERIRSELAKLRVEVEKLEK 507

Query: 638 LRMVYEEY-VKLS---------KETIPVAEKNLHELTEELDQKSQAFDDVLGVLAQIKAD 687
           +   Y EY  +L+         K  +   EK L ++ E+L + +     +  V+ + +  
Sbjct: 508 MLREYSEYKSRLAMLMGYYEQLKGELSRVEKELRDIEEQLKESNLELMRLREVMEKYRIL 567

Query: 688 KES---VEVLVQPVETADRLFQEIQLWQKQV----DDLEYMLDSRGQGVRTMEEIQLELS 740
           +E    ++ L   +ET   L +E +  + Q     + LE + D  G  +  + EI  +  
Sbjct: 568 EEKRARLQALEGKLETLSVLREEYEELEAQALSLYERLEDISDRLGVSLDKLIEIDEDTV 627

Query: 741 GSLSTKDNLQNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAAN----------TLRD 790
            ++  K  +   LEKLR+E+  +   L     R + LREE  K              L +
Sbjct: 628 SAIEEKIRM---LEKLRNERDQLRALLEQYDTRINVLREEIAKLEQDIQPLESLKARLEE 684

Query: 791 VKKAEEELE 799
           ++KAE ELE
Sbjct: 685 LRKAERELE 693


>gi|15899022|ref|NP_343627.1| purine NTPase [Sulfolobus solfataricus P2]
 gi|284175108|ref|ZP_06389077.1| purine NTPase [Sulfolobus solfataricus 98/2]
 gi|384432612|ref|YP_005641970.1| Rad50 zinc hook domain protein [Sulfolobus solfataricus 98/2]
 gi|18202628|sp|Q97WH0.1|RAD50_SULSO RecName: Full=DNA double-strand break repair Rad50 ATPase
 gi|13815551|gb|AAK42417.1| Purine NTPase [Sulfolobus solfataricus P2]
 gi|261600766|gb|ACX90369.1| Rad50 zinc hook domain protein [Sulfolobus solfataricus 98/2]
          Length = 864

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 59/253 (23%)

Query: 928  NLNYRETKAKVDKFASEIESLEERVLKIGG-VSTFETELGKHLLERDRLLSEVNRCQGTM 986
            NL+ +E + +  +   E+ESLE+ + +I   ++ +E +L     +R+++++ +N+ +   
Sbjct: 648  NLSLKEKENRKSRIEGELESLEKDIEEISNRIANYELQLK----DREKIINAINKLEKIR 703

Query: 987  SVYQTNISRNKIDLKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTM 1046
            S                    + +R     I + T ++   +L+   +  D   +    +
Sbjct: 704  SA-------------------LGERKLQSYIIMTTKQLIENNLNDIISKFD---LSIKNV 741

Query: 1047 KMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQTGDAELEMRGRCSA 1106
            +ME        +  +T RG                 RS S  +L+ T   +       S 
Sbjct: 742  EME--------IMPKTGRG-----------------RSSSGDILVYTNSGDTLPIVSLSG 776

Query: 1107 GQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQENF- 1165
            G+++  S+ +RLA+A+    N     LDEPT +LD      L   +      R  +E+  
Sbjct: 777  GERIALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEII------RAAKESVP 830

Query: 1166 QLIVITHDERFAQ 1178
            Q+IV+THDE   Q
Sbjct: 831  QIIVVTHDEEVVQ 843


>gi|15922434|ref|NP_378103.1| purine NTPase [Sulfolobus tokodaii str. 7]
          Length = 882

 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
             S G++V  +L +RLA+A++     G L LDEPT NLD    + L   +   +E      
Sbjct: 790  LSGGERVSIALALRLAIAKSLMNEVGFLILDEPTVNLDEYRKKELIDIIRSTVEVVP--- 846

Query: 1164 NFQLIVITHDERFAQ 1178
              Q+IV+THDE   Q
Sbjct: 847  --QIIVVTHDEELLQ 859


>gi|20978622|sp|Q96YR5.2|RAD50_SULTO RecName: Full=DNA double-strand break repair Rad50 ATPase
 gi|342306646|dbj|BAK54735.1| DNA double-strand break repair ATPase Rad50 [Sulfolobus tokodaii str.
            7]
          Length = 879

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
             S G++V  +L +RLA+A++     G L LDEPT NLD    + L   +   +E      
Sbjct: 787  LSGGERVSIALALRLAIAKSLMNEVGFLILDEPTVNLDEYRKKELIDIIRSTVEVVP--- 843

Query: 1164 NFQLIVITHDERFAQ 1178
              Q+IV+THDE   Q
Sbjct: 844  --QIIVVTHDEELLQ 856


>gi|288931956|ref|YP_003436016.1| SMC domain protein [Ferroglobus placidus DSM 10642]
 gi|288894204|gb|ADC65741.1| SMC domain protein [Ferroglobus placidus DSM 10642]
          Length = 885

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            S G++V+A+L +RLAL   F  + G++  DEPT N+D     + A  +  I   R     
Sbjct: 802  SGGEQVVAALSVRLALL-KFLSSAGVVFFDEPTQNMDEERRRNFARQITNIKGFR----- 855

Query: 1165 FQLIVITHDERFAQLI 1180
             Q+ VITHD+ F +++
Sbjct: 856  -QIFVITHDDTFEEMV 870


>gi|349603499|gb|AEP99321.1| DNA repair protein RAD50-like protein, partial [Equus caballus]
          Length = 747

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 127/644 (19%), Positives = 279/644 (43%), Gaps = 68/644 (10%)

Query: 93  QAQEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHT 152
           Q Q++K  + +L+ L+  K+ A ++R+ I+  + +  + K  ++  E  +  + +++   
Sbjct: 3   QGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEI 62

Query: 153 ELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIE----DTDEELKNWKNNFEGI 208
           E  L  + ++ ++I  + +R+    +Q +K  + L +++E     TDE+L +  +N +  
Sbjct: 63  EQNLSKIMRLDNEIKALDSRK----KQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRT 118

Query: 209 VAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAHMSRMNERDSTIQKL 268
           V ++E  +   +RE   ++ +   L Q       E   L  +   H   +  RDS IQ L
Sbjct: 119 VREKERRLVDCQREVEKLNKESGLLNQEKSDLLVEQGRLQLQEDRHREHVRARDSLIQSL 178

Query: 269 FARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSDELALKMAWDSYLDAND 328
            ++  L      PFS     NF   +R R          +++  E A  +  D     + 
Sbjct: 179 ASQLELDGFERGPFSERQIKNFHKLVRER----------QEREAETASHLMNDYAEKESL 228

Query: 329 RWKNIEAQKQAK------MEIKAGILKHIKEKENERDSFELQISNLNLSHIDERENKMRI 382
           + K I+  +  K      +E+K+ IL    +K+NE  + + ++  L  S   +R  ++  
Sbjct: 229 KQKQIDEIRDKKTGLGRIIELKSEIL---TKKQNELKNVKYELQQLEGS--SDRILELDQ 283

Query: 383 EVERKTNQLAEREFEINIRQKQSELFA-------MDQKIKALNREKDVLAGDSEDRVKLA 435
           E+ +   +L++ E   N+   ++E+ +       +D+ ++ L++E + L   +  R ++ 
Sbjct: 284 ELTKAERELSKAEKSSNVEMLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQME 343

Query: 436 LKKAELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRALLTEFDDLSSKS 495
           +   +  +  ++ +KI   + D++  +L G  P  + L+              D L SKS
Sbjct: 344 MLTKDKADKDEQIRKIKSRHSDELTSLL-GYFPNKKQLE--------------DWLHSKS 388

Query: 496 READKEVNMLQMKIQEVTDNLS-----KHRKDVDSKKRFIESKLESLNQQIFSIDTYQKV 550
               KE+N  + ++  +   L+     K+  +++ K++  E +L S   ++F +   Q  
Sbjct: 389 ----KEINQTRDRLARLNKELASAEQNKNHINIEIKRK--EEQLSSYEDKLFDVCGSQDF 442

Query: 551 ---LDSAKEKRDVQKSKYNIADGMRQMFDPF--ERVARAHHVCPCCERPFSAEEE-DEFV 604
              LD  KE+ +    +  +  G   ++  F  +        CP C+R F  E E  E +
Sbjct: 443 DSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVI 502

Query: 605 KKQRVKAASSAEHMKVLSLESSNADSYFQQLDKLRMVYEEYVKLSKETIPVAEKNLHELT 664
              + K   + + +K    E    +    ++  L  V +  + L ++ IP     L  + 
Sbjct: 503 SDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVN 562

Query: 665 EELDQKSQAFDDVLGVLAQIKADKESVEVLVQPVETADRLFQEI 708
            ++ +     ++   +L  I  ++ES +V +  V   +R   E+
Sbjct: 563 RDIQRLKNDVEEQETLLGVIMPEEESAKVCLTDVSIMERFQMEL 606


>gi|217077030|ref|YP_002334746.1| exonuclease sbcc [Thermosipho africanus TCF52B]
 gi|217036883|gb|ACJ75405.1| exonuclease sbcc, putative [Thermosipho africanus TCF52B]
          Length = 927

 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
             S G++V  ++ IR AL++          LDEPT NLD    + LA  + ++ ED K   
Sbjct: 851  LSGGEQVSVAIAIRAALSKILS-KSDFYILDEPTINLDVERKKLLAENIEKLFEDVK--- 906

Query: 1164 NFQLIVITHDERFAQL 1179
              Q+ +ITHDE F+ +
Sbjct: 907  --QVFIITHDEEFSHM 920


>gi|448599915|ref|ZP_21655718.1| SMC domain-containing protein [Haloferax alexandrinus JCM 10717]
 gi|445736588|gb|ELZ88132.1| SMC domain-containing protein [Haloferax alexandrinus JCM 10717]
          Length = 902

 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 36/218 (16%)

Query: 975  LLSEVNRCQGTMSVYQTNIS--RNKIDLKQAQYKDIDKR--HFDQL-IQLKTTEMANKDL 1029
            L  ++   +GT+   Q N+    ++I   + Q +++D +   F++L   L+  E   + +
Sbjct: 700  LQGDIGSLEGTIETKQGNLEDLEDEIGEMEEQKEELDDKRDEFEELEADLEFGEFIRESV 759

Query: 1030 DRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKV 1089
            D     + + L++  +    E NKI R+L     RG   + +    D          Y++
Sbjct: 760  DDARPLMTEILVKEISA---EANKIYRQL-----RGTATEELEWRPD----------YEI 801

Query: 1090 LMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLA 1149
            ++ + + E +   + S G+++ A+L +RLA+ E    +  I+ LDEPTTNLD     +L 
Sbjct: 802  VI-SENGEEKAFDKLSGGEQMSAALAVRLAILELLS-DVDIVFLDEPTTNLDQEKRRNLV 859

Query: 1150 AALHRIMEDRKGQENF-QLIVITHDERFAQLIGQRQHA 1186
              L  +       E F QL VI+HD  F  +    +HA
Sbjct: 860  DQLQNL-------EGFEQLTVISHDGAFESVT---EHA 887


>gi|315231626|ref|YP_004072062.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP]
 gi|315184654|gb|ADT84839.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP]
          Length = 865

 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            S G+KV  +L +RLA+A        ++ +DEPTT+LD      L   L +  +     EN
Sbjct: 771  SGGEKVAVALALRLAIARVLARRLSVIIMDEPTTHLDEERRRDLVEILGKFFK----AEN 826

Query: 1165 F--QLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEA 1204
               Q+I++TH      +      A+  Y V K D    ++E+
Sbjct: 827  TVPQIIIVTHHRELEDV------ADTVYIVQKVDGISKVVES 862


>gi|296109493|ref|YP_003616442.1| SMC domain protein [methanocaldococcus infernus ME]
 gi|295434307|gb|ADG13478.1| SMC domain protein [Methanocaldococcus infernus ME]
          Length = 873

 Score = 43.9 bits (102), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            S G+KV   L  RLAL+     N  +L +DEPT  LD      L   + R +     +  
Sbjct: 785  SGGEKVALGLAFRLALSLYLAGNIPLLIMDEPTPYLDEERRRRLVDIIERYL-----KRI 839

Query: 1165 FQLIVITHDE 1174
             Q+I+++HDE
Sbjct: 840  PQVIIVSHDE 849


>gi|123455564|ref|XP_001315525.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
 gi|121898204|gb|EAY03302.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
          Length = 2207

 Score = 43.9 bits (102), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 39/239 (16%)

Query: 97   IKTYKLKLENLQTLKDAAYKLRESISQDQEKTEALKNQMQELEKSIQDIDDKIHHTEL-- 154
            I + K +LEN   ++D + +L++ +    E+ E  KN  +ELE  ++++   I+  +L  
Sbjct: 808  IDSKKKELENTPEVQDNSEELKKQLDDINEQIEKRKNDNKELEDKLEELSKAINEQKLAD 867

Query: 155  --TLKDLRKMQDQISTMTARRSTLF---------------------EQQQKQYAA----- 186
              T K   +++ QI    A +++L                      EQ +KQ        
Sbjct: 868  EETAKKNEELEKQIKDKEAEKNSLVPVEDKTEELARKLADLEKQIAEQLEKQNETDGKNK 927

Query: 187  -LAEEIEDTDEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEIT 245
             L ++I++  E+L   KNNF     ++E++I +L +E ND+D+KI  ++  I  +  E  
Sbjct: 928  DLEQQIKEKQEKLDELKNNFIEDTKEKENEIEELLQELNDLDSKINEIQDQISQFQEE-- 985

Query: 246  NLLSEAGAHM-SRMNERDSTIQKLFARHNLGSLPNAPFSNEAALN--FINRIRSRLSDL 301
                E   H+ S +N +D  +Q L    NL  L   P   E  ++   +++I  +++DL
Sbjct: 986  --YEEKKDHIVSDINTKDQLLQDLM-EENLKQLKETPVVAEEPIDSEALDKINDQMADL 1041


>gi|328782281|ref|XP_001121644.2| PREDICTED: hypothetical protein LOC725841 [Apis mellifera]
          Length = 1000

 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 48/368 (13%)

Query: 135 MQELEKSIQDIDDKIHHTELTLKDLRKMQDQISTMTARRSTLFEQQQKQYAALAEEIEDT 194
           +QELE  I+D+ +++   EL L++LRK Q ++ T   R      + Q++     +E   T
Sbjct: 125 IQELEHHIEDMKEEVQKLELQLEELRKKQTEVETQHRRDIESMAKLQQEILNGYDEKHQT 184

Query: 195 DEELKNWKNNFEGIVAKRESDISKLEREKNDMDTKIKFLEQNIDAYTAEITNLLSEAGAH 254
             E+KN ++    +  ++E +I   +  + D+  +I    + I A  +E           
Sbjct: 185 --EVKNLRSQLLEVSEEKEREIETRKAMEGDLRNRITDFSKRIVALESEF---------- 232

Query: 255 MSRMNERDSTIQ--KLFARHNLGSLPNAPFSNEAALNFINRIRSRLSDLERDLEDKKKSD 312
           + + N    TIQ  K+        L     S+   +N + + +S+L+    +L D++   
Sbjct: 233 LDKKNTDVETIQFLKVQIEELTTQLEKTTISHIDEINLLEQEKSQLNSCISNLTDERDKL 292

Query: 313 ELALKMAWDSYLDANDRWKNIEAQKQAKMEIKAGILKHIKEKENERDSFELQISNLNLSH 372
           EL L+   +  L+   +   ++ +     E+KA   K I     E  S E+     +L +
Sbjct: 293 ELRLQTRQNVILELQGQLSTLQCELD---ELKAEYEKII-----ENSSKEIN----DLKY 340

Query: 373 IDERE-NKMRIEVERKTNQLAEREFEINIRQKQSELFAMDQKIKALNREKDVLAGDSEDR 431
           I E E +K++IE E+      E+ F IN  +++SE+     KIK LN E + L  + E+ 
Sbjct: 341 IHEEEIDKLKIEFEK------EKIFLIN--KEESEI-----KIKNLNEENNFLKEELENV 387

Query: 432 VKL------ALKKA--ELENHKKKHKKIIDEYKDKIRDVLKGRLPLDRDLKKEITQALRA 483
            KL       L++A  ELE+  +KH  I+ ++K+ + DV+K        LKK++  A   
Sbjct: 388 QKLYKDVNNRLREAHQELEDSDRKHNLILKKHKEDLADVMKLHDEEKFQLKKQLEDARLD 447

Query: 484 LLTEFDDL 491
            L E ++L
Sbjct: 448 YLKEIENL 455


>gi|225851132|ref|YP_002731366.1| DNA double-strand break repair protein Rad50 [Persephonella marina
            EX-H1]
 gi|225645387|gb|ACO03573.1| putative DNA double-strand break repair protein Rad50 [Persephonella
            marina EX-H1]
          Length = 893

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 1104 CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQE 1163
             S GQ+    + +RLA+         +L LDEPT +LD      L   L  +      ++
Sbjct: 805  ISGGQRTALGIALRLAIGRFLSSKNEVLILDEPTVHLDDQRRSELINLLLEL-----KRK 859

Query: 1164 NF--QLIVITHD 1173
            NF  QLI++THD
Sbjct: 860  NFVRQLIIVTHD 871


>gi|336122538|ref|YP_004577313.1| DNA double-strand break repair rad50 ATPase [Methanothermococcus
            okinawensis IH1]
 gi|334857059|gb|AEH07535.1| DNA double-strand break repair rad50 ATPase [Methanothermococcus
            okinawensis IH1]
          Length = 997

 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 1105 SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALHRIMEDRKGQEN 1164
            S G+++  SL +RL +++  C N   + LDEPT  LD    + L      I         
Sbjct: 911  SGGEQIAVSLALRLGISKAVCNNLQCIILDEPTAFLDEDRRKKLLNVFGNIKTIS----- 965

Query: 1165 FQLIVITHDERFAQL 1179
             Q+ VI+H     Q+
Sbjct: 966  -QVFVISHHNELEQV 979


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.130    0.349 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,702,038,209
Number of Sequences: 23463169
Number of extensions: 700310458
Number of successful extensions: 4187539
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 81045
Number of HSP's that attempted gapping in prelim test: 3438070
Number of HSP's gapped (non-prelim): 423555
length of query: 1209
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1055
effective length of database: 8,745,867,341
effective search space: 9226890044755
effective search space used: 9226890044755
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 83 (36.6 bits)