BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000958
(1208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULE6|PALD_HUMAN Paladin OS=Homo sapiens GN=PALD1 PE=1 SV=3
Length = 856
Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 208/791 (26%), Positives = 329/791 (41%), Gaps = 160/791 (20%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ L V G+ P++ G R VL+ + QKDG R V++ +REEPV+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQKL--QKDGHRECVIF-CVREEPVLFLRADE 175
Query: 102 ---PFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQM 158
+ RD NL+ G RVE +E ++++I A N V
Sbjct: 176 DFVSYTPRDKQNLHENLQGLGPG-VRVESLELAIRKEIHDFAQLSENTYHVYH-----NT 229
Query: 159 VDQW-EPVSC-----DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKI 212
D W EP + D + +VY+ Y R+P+ ++ SP E D V +
Sbjct: 230 EDLWGEPHAVAIHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVL 289
Query: 213 SQTDLNTEV----------IFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVF 262
+T ++ +F+CQMG GRT GMV+ TL+ L+R G + P
Sbjct: 290 RETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQP--------- 340
Query: 263 DSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIA 322
++ + A LP ++ VI+S R++ G +VD+ I CA + +L+E +
Sbjct: 341 EAAPTQAKPLPME-------QFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKEVVL 393
Query: 323 TYRNSILRQPDEMKRQASLSFFVEY------LERYYFLICFAVYIHTERAALCSSSFGHS 376
+ + E Q S S + LERY++LI F Y+H E+ L +
Sbjct: 394 ENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLH-EQYPLAFA----L 448
Query: 377 SFADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNG 436
SF+ W+ A PELY + L P+ P ++ +LR
Sbjct: 449 SFSRWLCAHPELYRLPVTLSSAGPVA---------------------PRDLIARGSLRED 487
Query: 437 QVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGH 496
++ + R NFR V P+YG A P+ + S++ +
Sbjct: 488 DLVSPDALSTV-------------REMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTD 534
Query: 497 FK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDI 555
K V W ++REE V+ +G + LR P + +++E +EA+LK +
Sbjct: 535 AKRRLRKVVWVSLREEAVLECDGHTYSLRWPGPP---------VAPDQLETLEAQLKAHL 585
Query: 556 LREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITD 615
G + +T T EVF + Y R+P+ D
Sbjct: 586 SEPPPGKEGPLTYRFQT----------------CLTMQEVFSQHRRACPGLTYHRIPMPD 629
Query: 616 GKAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIR 672
AP+ DFD L + A+ SKD T FVF+C G+GRTTT V+A L I G P
Sbjct: 630 FCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAVLAFWHIQ-GFP-- 686
Query: 673 VLHEDVTHEEL----DSGSSSGE-----------ENGGNGA----ASTSSISKNIREAVL 713
+V EEL D+ + GE +G A+ ++S+ +
Sbjct: 687 ----EVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHY 742
Query: 714 HYRKVFNQQHVEPR-------VRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGE 766
H R++ + + + +R + L R +YLERY LI F AYL E D +
Sbjct: 743 HLREIIICTYRQAKAAKEAQEMRRLQL-RSLQYLERYVCLILFNAYLHLEKADSW----- 796
Query: 767 SRMTFKSWLRQ 777
+ F +W+++
Sbjct: 797 -QRPFSTWMQE 806
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 177/362 (48%), Gaps = 59/362 (16%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + ++G A P+ + + ++L ++ K R +V+W+SLREE V+ +G + LR
Sbjct: 505 NFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR-KVVWVSLREEAVLECDGHTYSLR 563
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
G P + ++E +EA+LK + ++ P + + +
Sbjct: 564 WPGPP--------VAPDQLETLEAQLKAHL-------------SEPPPGKEGPLTYRFQT 602
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
C +++ +V+ + + + Y R+P+ D +P+E+DFD L++ + D T +F
Sbjct: 603 CLTMQ---EVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVF 659
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
+C G+GRTTT MV+A L + + G P + G ++P+++ +GE
Sbjct: 660 SCLSGQGRTTTAMVVAVLAFWH---IQGFP---------EVGEEELVSVPDAK--FTKGE 705
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMK 336
+ V+ + ++L G K++VD +D + +LRE I TYR + ++ EM+
Sbjct: 706 FQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMR 765
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIR 393
R S ++YLERY LI F Y+H E+A F+ WM+ ++ +Y I+
Sbjct: 766 RLQLRS--LQYLERYVCLILFNAYLHLEKA-----DSWQRPFSTWMQEVASKAGIYEILN 818
Query: 394 RL 395
L
Sbjct: 819 EL 820
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 182/791 (23%), Positives = 293/791 (37%), Gaps = 168/791 (21%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+V G V+G+ P++ G R V++++ GH + C +F +REEPV+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRE--CVIF--CVREEPVLFLRAD 174
Query: 520 PFVLREVERPYKNMLE-YTGIDRE-RVERMEARLKEDILREAERYGGAIMVIHETNDGQI 577
+ R +N+ E G+ RVE +E ++++I A+ V H T D
Sbjct: 175 EDFVSYTPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTED--- 231
Query: 578 FDAWE-------------HVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDF 624
W HV+ E + PL + +Y R+P+ + +P +
Sbjct: 232 --LWGEPHAVAIHGEDDLHVTEEVYKRPLFLQPT-------YRYHRLPLPEQGSPLEAQL 282
Query: 625 DMLAVNIASASK----------DTAFVFNCQMGRGRTTTGTVIACLLKLR---------- 664
D + A VF+CQMG GRT G V+ L+ L
Sbjct: 283 DAFVSVLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEA 342
Query: 665 -IDYGRPIRVLHEDVTHEEL---DSGSSSGEENGGNGAASTSSISKNIREAVLHYRKVFN 720
+P+ + V L G EE + A + + +++E VL +K
Sbjct: 343 APTQAKPLPMEQFQVIQSFLRMVPQGRRMVEEV--DRAITACAELHDLKEVVLENQKKLE 400
Query: 721 QQHVEPRV-----RMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWL 775
E R R LERYF LI F YL + F ++F WL
Sbjct: 401 GIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLHEQYPLAFA------LSFSRWL 454
Query: 776 RQRPEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAVM-EAIVRARNGSVLGKGSILK 834
PE+ + ++ P +L A + D V +A+ R V + +
Sbjct: 455 CAHPELYRLPVTLS---SAGPVAPRDLIARGSLREDDLVSPDALSTVREMDVANFRRVPR 511
Query: 835 MYFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISGAKEMLAYL-GAKTKTEGSFSQ 893
M P+Y A P+ +LAYL AK + +
Sbjct: 512 M--------------------------PIYGTAQPSAKALGSILAYLTDAKRRL-----R 540
Query: 894 KVILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQS 953
KV+ LREEAV+ +G + LR PV + +E +EA+LK
Sbjct: 541 KVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQ--------LETLEAQLKA--------- 583
Query: 954 GGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRER 1013
H E P + + T EV++ + +TY RIP+
Sbjct: 584 ------HLSEPPPGKEGPLTYRFQTCL------TMQEVFSQHRRACPGLTYHRIPMPDFC 631
Query: 1014 DALASDIDAI------QYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVP 1067
D D + KD G ++F +G G AM + L F
Sbjct: 632 APREEDFDQLLEALRAALSKDPGTG-FVFSCLSGQGRTTTAMVVAVLAFWHIQGF----- 685
Query: 1068 QSLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAG 1127
P EE L S D + K G+++ ++ + ++L G + K +VD ++ +
Sbjct: 686 --------PEVGEEELVS-VPDAKFTK-GEFQVVMKVVQLLPDGHRVKKEVDAALDTVSE 735
Query: 1128 AG-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYCTSP 1182
HLR+ I+ + K + +R L ++ L RY LI F ++L+
Sbjct: 736 TMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLR--SLQYLERYVCLILFNAYLHLEKA 793
Query: 1183 AEIN--FKSWM 1191
F +WM
Sbjct: 794 DSWQRPFSTWM 804
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 51/373 (13%)
Query: 851 GAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYIN 909
GAP+ +V G V+ M P++SG + +L K + +G ++ ++ +REE V+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQ----KLQKDGH--RECVIFCVREEPVLFLR 172
Query: 910 G----TPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 965
+ R+ + L+ +G G VE +E ++++I + S ++ +
Sbjct: 173 ADEDFVSYTPRDKQNLHENLQGLG-PGVRVESLELAIRKEIHDFAQLSENTYHVYHNTED 231
Query: 966 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA-IQ 1024
+V + E DD+ EVY Y R+PL + L + +DA +
Sbjct: 232 LWGEPHAVAIHGE----DDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVS 287
Query: 1025 YCKD--------DSAG---CYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 1073
++ D+ G +F G G M + L L + S+ P
Sbjct: 288 VLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQ-------P 340
Query: 1074 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1133
T + LP M ++ I + R++ G + +VD I CA L++
Sbjct: 341 EAAPTQAKPLP----------MEQFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKE 390
Query: 1134 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1187
+L ++L+ E Q R + + +L RYF+LI F +L+ P ++F
Sbjct: 391 VVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLHEQYPLAFALSF 450
Query: 1188 KSWMDGRPELGHL 1200
W+ PEL L
Sbjct: 451 SRWLCAHPELYRL 463
>sp|Q6DIR8|PALD_XENTR Paladin OS=Xenopus tropicalis GN=pald1 PE=2 SV=1
Length = 872
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 183/784 (23%), Positives = 338/784 (43%), Gaps = 136/784 (17%)
Query: 44 GAPNYRQA-DSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQA V+G+ P++ G + VL+ + Q +G + + ++ +REEPV+++
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKL--QSNGHK-ECVFFCVREEPVLFLKLED 178
Query: 102 ---PFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQM 158
P+ R NL + R E +E +++++ A GN V +++ +
Sbjct: 179 DFVPYTPRRKENLHENL-HDLEKGLRAENLELAIRKELHDFAQLSGNSYYVYNDIEHFKD 237
Query: 159 VDQWEPVSCDS-VKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT-- 215
+ C+ + +VY Y R+P+ + +P E FD V+ + +
Sbjct: 238 EPHSIIIHCEEDIHVTEEVYNRPVFLLPAYRYHRLPLPMDGAPLETQFDAFVNILRENPS 297
Query: 216 -----DLN---TEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSS 267
D N ++F+CQ G GRT M++ TLV +R GA
Sbjct: 298 LLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACE---------------- 341
Query: 268 VADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNS 327
+ + + + VI++ ++ G +VDK I+ C+ M +++ A+ +
Sbjct: 342 -KQTISQDTNVLPKQRFQVIQNFINMVPNGEAIVDEVDKAIELCSEMHDIKAALYECKKK 400
Query: 328 I--LRQPDEMKRQASLSFFVE----YLERYYFLICFAVYIHTERAALCSSSFGHSSFADW 381
+ + + +++ ++ +F++ LERY++LI F Y+H E+ L + SF+ W
Sbjct: 401 LEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLH-EQYPLAFA----LSFSKW 455
Query: 382 MKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQVL-- 439
M +P +Y + +L + + S G+++
Sbjct: 456 MCTQPWIYRL---------QASLNLSELTLS-----------------------GELITK 483
Query: 440 GSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHFK- 498
G++ ++ D +L E NFR V PVYG A P++ SV+ + K
Sbjct: 484 GTRVLVLDDRFSPDVLSTLKEM--NVANFRRVPKMPVYGTAQPSLKATGSVLSYLTDAKR 541
Query: 499 GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDILRE 558
+ W N+RE+ ++ N + F RE + + + E++E++EA + +L
Sbjct: 542 KYSNILWVNLREDVILEANEQIFTPREPDN-LEQQIAVPAASPEQLEKLEATVANHVLTS 600
Query: 559 AERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFP-IKYARVPITDGK 617
+ + + + ++F ++ +T E+F +P + Y R+PI D
Sbjct: 601 QKWLE---VYLEQEKQMKMF--------KTCRTMQEIFN-QHRSAYPGLVYRRIPIPDFC 648
Query: 618 APKTSDFDMLAVNIASA---SKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVL 674
AP+ DFDML ++ S AFVFNC G+GRTTT VIA L + I +
Sbjct: 649 APREQDFDMLLQSMKSMLAEDSSAAFVFNCHGGKGRTTTAMVIAVLTLWHFN---SIPEI 705
Query: 675 HEDVTHEELDSGSSSGE-----------ENG-----------GNGAASTSSISKNIREAV 712
ED D+ + GE +G + + + + + ++RE +
Sbjct: 706 TEDEIVSVPDAKYTKGEFEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREII 765
Query: 713 L-HYRKVFNQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTF 771
+ YR+V ++ + +R++ L R +YLERY LI F AYL E D + + F
Sbjct: 766 ICTYRQVKTAKNSK-EMRLLQL-RSLQYLERYIYLILFNAYLHLEKKDTW------QRPF 817
Query: 772 KSWL 775
+W+
Sbjct: 818 STWM 821
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 46/362 (12%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + V+G A P+++ +VL ++ K K +LW++LRE+ ++ N + F R
Sbjct: 509 NFRRVPKMPVYGTAQPSLKATGSVLSYLTDAKR-KYSNILWVNLREDVILEANEQIFTPR 567
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
+ + + ++E++EA + N +L + + + + + +
Sbjct: 568 EPDNLEQQIAVPAASPEQLEKLEATV-----------ANHVLTSQKWLEVYLEQEKQMKM 616
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
+ + +++ + + + Y R+P+ D +P+EQDFD+L+ + D + +F
Sbjct: 617 FKTCRTMQEIFNQHRSAYPGLVYRRIPIPDFCAPREQDFDMLLQSMKSMLAEDSSAAFVF 676
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
NC G+GRTTT MVIA L + + IP D SV D +GE
Sbjct: 677 NCHGGKGRTTTAMVIAVLTLWH---FNSIPEITE-----DEIVSVPD------AKYTKGE 722
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRN-SILRQPDEMK 336
+ V+ + ++L G + K++VD +D + +LRE I TYR + EM+
Sbjct: 723 FEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREIIICTYRQVKTAKNSKEMR 782
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWM---KARPELYSIIR 393
S ++YLERY +LI F Y+H E+ F+ WM ++ +Y ++
Sbjct: 783 LLQLRS--LQYLERYIYLILFNAYLHLEK-----KDTWQRPFSTWMYEVASKAGVYEVLN 835
Query: 394 RL 395
+L
Sbjct: 836 QL 837
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 169/793 (21%), Positives = 318/793 (40%), Gaps = 158/793 (19%)
Query: 464 GAPNFREV-SGFPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+ G+ VYG+ P+++G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGH-KEC--VFF-CVREEPVLFLKLE 177
Query: 520 ----PFVLREVERPYKNMLEY-TGIDRERVERMEARLKEDILREAERYGGAIMVIHETND 574
P+ R E ++N+ + G+ R E +E +++++ A+ G + V ++
Sbjct: 178 DDFVPYTPRRKENLHENLHDLEKGL---RAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 575 GQ------IFDAWE--HVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDM 626
+ I E HV+ E P+ + +Y R+P+ AP + FD
Sbjct: 235 FKDEPHSIIIHCEEDIHVTEEVYNRPVFLLPAY-------RYHRLPLPMDGAPLETQFDA 287
Query: 627 LAVNIASASKDT-----------AFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLH 675
VNI + A +F+CQ G GRT ++ L+ + +
Sbjct: 288 F-VNILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACEKQTIS 346
Query: 676 EDVTHEELDSGSSSGEENGGNGAASTSSISKNIREAVLHYRKVFNQQH------VEPRVR 729
+D L +N N + +I + +A+ ++ ++ H E + +
Sbjct: 347 QDTN--VLPKQRFQVIQNFINMVPNGEAIVDEVDKAI----ELCSEMHDIKAALYECKKK 400
Query: 730 MVALSRG--------AEY--------LERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKS 773
+ + G EY LERYF LI F YL + F ++F
Sbjct: 401 LEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLHEQYPLAFA------LSFSK 454
Query: 774 WLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAVMEAIVRARNGSVLGKGS-- 831
W+ +P + ++ S+ + LT+ +G ++ KG+
Sbjct: 455 WMCTQPWIYRLQASLNLSE---LTL------------------------SGELITKGTRV 487
Query: 832 -ILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISGAKEMLAYLGAKTKTEGS 890
+L F P S ++ + +V PVY A P++ +L+YL T +
Sbjct: 488 LVLDDRFSPD--VLSTLKEMNVANFRRVPKMPVYGTAQPSLKATGSVLSYL---TDAKRK 542
Query: 891 FSQKVILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEV 950
+S ++ +LRE+ ++ N F RE + + + +E +EA + +LT
Sbjct: 543 YS-NILWVNLREDVILEANEQIFTPREPDNLEQQIAVPAASPEQLEKLEATVANHVLTS- 600
Query: 951 RQSGGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLT 1010
Q + L +E+ + +T E++ + + YRRIP+
Sbjct: 601 -QKWLEVYLEQEK--------------QMKMFKTCRTMQEIFNQHRSAYPGLVYRRIPIP 645
Query: 1011 RERDALASDIDAI-----QYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASK 1065
D D + +DS+ ++F H G G AM I L L +F S
Sbjct: 646 DFCAPREQDFDMLLQSMKSMLAEDSSAAFVFNCHGGKGRTTTAMVIAVLTL---WHFNS- 701
Query: 1066 VPQSLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERC 1125
+P E+ + S + + G++ ++ + ++L G + K +VD ++
Sbjct: 702 ---------IPEITEDEIVS--VPDAKYTKGEFEVVMKIVQLLPDGHKIKKEVDMALDSI 750
Query: 1126 AGAG-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYCT 1180
+ HLR+ I+ ++K N ++ L ++ L RY +LI F ++L+
Sbjct: 751 SETMTPMHYHLREIIICTYRQVKTAKN--SKEMRLLQLRSLQYLERYIYLILFNAYLHLE 808
Query: 1181 SPAEIN--FKSWM 1191
F +WM
Sbjct: 809 KKDTWQRPFSTWM 821
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 142/368 (38%), Gaps = 52/368 (14%)
Query: 851 GAPHVYKV-DGYPVYSMATPTISGAKEMLAYLGAKTKTEGSF----SQKVILTDLREEAV 905
GAP+ + GY VY M P+++G K++L L + E F + V+ L ++ V
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGHKECVFFCVREEPVLFLKLEDDFV 181
Query: 906 VYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 965
Y TP L++ + L+ G E++E +++++ + SG ++ + +
Sbjct: 182 PY---TPRRKENLHENLHDLE----KGLRAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 966 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA--- 1022
S++ + E +D+ EVY Y R+PL + L + DA
Sbjct: 235 FKDEPHSIIIHCE----EDIHVTEEVYNRPVFLLPAYRYHRLPLPMDGAPLETQFDAFVN 290
Query: 1023 ---------IQYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 1073
+ + + LF TG G AM + L L K
Sbjct: 291 ILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACEK-------- 342
Query: 1074 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1133
+ + D ++ I N ++ G +VD IE C+ ++
Sbjct: 343 ----------QTISQDTNVLPKQRFQVIQNFINMVPNGEAIVDEVDKAIELCSEMHDIKA 392
Query: 1134 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1187
+ ++L+ Y Q + Y + + +L RYF+LITF +L+ P ++F
Sbjct: 393 ALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLHEQYPLAFALSF 452
Query: 1188 KSWMDGRP 1195
WM +P
Sbjct: 453 SKWMCTQP 460
>sp|Q8JHZ8|PALD_CHICK Paladin OS=Gallus gallus GN=PALD1 PE=2 SV=2
Length = 868
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 192/790 (24%), Positives = 334/790 (42%), Gaps = 145/790 (18%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYI---- 98
GAPN+RQA V G+ P++ G + VL+ + Q++G + + ++ +REEPV+++
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQKL--QREGHK-ECVFFCVREEPVLFLRVES 174
Query: 99 NGRPFVLRDVGRPFSNLEYTGINRA-RVEQMEARLKEDIIMEAARFGNKILVTDELPDGQ 157
+ P+ R NL + R RVE +E ++++I A V +++ +
Sbjct: 175 DFVPYTPRGKENLHENLH--SLRRGLRVEDLELTIRKEIHDFAQLSEGVYYVYNDIE--R 230
Query: 158 MVDQWEPVSC---DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQ 214
D+ V + + +VY Y R+P+ + +P E+ FD + + +
Sbjct: 231 FRDEPHTVRVQGEEDIHVTEEVYRRPIFLLPTYRYHRLPLPVDGAPLEEQFDAFICFLRE 290
Query: 215 TD---------LNTEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSG 265
+ ++F+CQ G GRT M + TL+ + GA+ P
Sbjct: 291 SSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTLILHHHRGAAPKP------------ 338
Query: 266 SSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYR 325
+ P+ + R + VI+S ++ G + +VD VI C+ M +++EAI +
Sbjct: 339 -----DPPHPAKMPPRARFRVIQSFIEMVPKGQQMVEEVDSVIASCSEMHDMKEAIYESK 393
Query: 326 NSI--LRQPDEMKRQASLSFFVE----YLERYYFLICFAVYIHTERAALCSSSFGHS-SF 378
+ + + +++ ++ +F++ LERY++LI F Y+H + G + SF
Sbjct: 394 KKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFYLIAFNYYLHEQYP------LGFALSF 447
Query: 379 ADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAAL--RNG 436
+ WM PELY + A E+ + L +
Sbjct: 448 SRWMCRHPELYRL---------------------------QAIMNSSELTITGDLITKGT 480
Query: 437 QVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGH 496
+VL V+ CP + + NFR V P+YG A P+ + SV+R +
Sbjct: 481 RVL----VVDERFCPDVLSTV---KEMSVANFRRVPKMPIYGTAQPSSKALGSVLRYLTD 533
Query: 497 FK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDI 555
K + W ++REE V+ N + + LRE ++ E++E++E+ LK D+
Sbjct: 534 AKRKHSRILWVSLREEVVLEGNEQIYTLRE-PGSLDQLIPVPVSTPEQLEKLESTLKGDL 592
Query: 556 LREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITD 615
L+ + + + ++F +S T E+F + + Y R+PI D
Sbjct: 593 LKSQKWLE---VYLEAEKQMKMF--------KSCLTTQEIFNQHKSTCQGLTYRRIPIPD 641
Query: 616 GKAPKTSDFDMLAVNIASA---SKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIR 672
APK DFD L + SA TAFVFNC GRGRTTT VIA L + G P
Sbjct: 642 FCAPKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTLWHFN-GIP-- 698
Query: 673 VLHEDVTHEEL----DSGSSSGE---------------ENGGNGAASTSSISKNIREAVL 713
+++ EE+ D+ + GE + ++S+ +
Sbjct: 699 ----EMSEEEIVSVPDAKYTKGEFEVVMKVVQLLPDGHRMKKEVDMALDTVSETMTPMHY 754
Query: 714 HYRKVFNQQHVEPRV------RMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGES 767
H R++ + + R R + R +YLERY LI F +YL E D +
Sbjct: 755 HLREIIICTYRQGRSGKDEQERRLLRLRSLQYLERYIYLILFNSYLHLEKKDSW------ 808
Query: 768 RMTFKSWLRQ 777
+ F W+R+
Sbjct: 809 QRPFSLWMRE 818
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 43/373 (11%)
Query: 20 GKRTILKSDHFPGCQNKRLTPQIDGAPNYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKD 79
G R ++ + F C + T + N+R+ + ++G A P+ + + +VL+++ K
Sbjct: 479 GTRVLVVDERF--CPDVLSTVKEMSVANFRRVPKMPIYGTAQPSSKALGSVLRYLTDAKR 536
Query: 80 GKRVQVLWISLREEPVVYINGRPFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIME 139
K ++LW+SLREE V+ N + + LR+ G + ++E++E+ LK D++
Sbjct: 537 -KHSRILWVSLREEVVLEGNEQIYTLREPGSLDQLIPVPVSTPEQLEKLESTLKGDLLKS 595
Query: 140 AARFGNKILVTDELPDGQMVDQWEPVSCDSVKAPLDVYEELQVEGYLVDYERVPVTDEKS 199
+ ++ +M SC + + +++ + + + Y R+P+ D +
Sbjct: 596 QKWLEVYLEAEKQM---KMFK-----SCLTTQ---EIFNQHKSTCQGLTYRRIPIPDFCA 644
Query: 200 PKEQDFDILVDKISQT---DLNTEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTN 256
PKEQDFD L++ + D T +FNC GRGRTTT MVIA L + +GIP +
Sbjct: 645 PKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTLWH---FNGIPEMS 701
Query: 257 SIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ- 315
V ++P+++ +GE+ V+ + ++L G K++VD +D +
Sbjct: 702 EEEIV---------SVPDAKYT--KGEFEVVMKVVQLLPDGHRMKKEVDMALDTVSETMT 750
Query: 316 ----NLRE-AIATYRNSILRQPDEMKRQASLSFFVEYLERYYFLICFAVYIHTERAALCS 370
+LRE I TYR DE +R+ ++YLERY +LI F Y+H E+
Sbjct: 751 PMHYHLREIIICTYRQG-RSGKDEQERRLLRLRSLQYLERYIYLILFNSYLHLEK----- 804
Query: 371 SSFGHSSFADWMK 383
F+ WM+
Sbjct: 805 KDSWQRPFSLWMR 817
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 184/790 (23%), Positives = 314/790 (39%), Gaps = 153/790 (19%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+ G + V+G+ P++ G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQKLQREGH-KEC--VFF-CVREEPVLFLRVE 173
Query: 520 PFVLREVERPYKNMLEYTGIDRE--RVERMEARLKEDILREAERYGGAIMVIHETNDGQI 577
+ R +N+ E R RVE +E ++++I A+ G V ND +
Sbjct: 174 SDFVPYTPRGKENLHENLHSLRRGLRVEDLELTIRKEIHDFAQLSEGVYYVY---NDIER 230
Query: 578 FDAWEHV----SSESVQTPLEVFKCLEDDGFPI------KYARVPITDGKAPKTSDFDML 627
F H E + EV++ PI +Y R+P+ AP FD
Sbjct: 231 FRDEPHTVRVQGEEDIHVTEEVYR------RPIFLLPTYRYHRLPLPVDGAPLEEQFDAF 284
Query: 628 AVNIASAS---------KDTAFVFNCQMGRGRTTTGTVIACLL-------KLRIDYGRP- 670
+ +S A +F+CQ G GRT + L+ + D P
Sbjct: 285 ICFLRESSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTLILHHHRGAAPKPDPPHPA 344
Query: 671 -------IRVLHEDVTHEELDSGSSSGEENGGNGAASTSSISKNIREAVLHYRKVF---- 719
RV+ + E + G EE + ++ S +++EA+ +K
Sbjct: 345 KMPPRARFRVIQSFI--EMVPKGQQMVEEV--DSVIASCSEMHDMKEAIYESKKKLEGIG 400
Query: 720 -NQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQR 778
+ Q + L R + LERYF LIAF YL + GF ++F W+ +
Sbjct: 401 EDYQIQGNSTKEYFLQRTLQSLERYFYLIAFNYYLHEQYPLGFA------LSFSRWMCRH 454
Query: 779 PEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAVMEAIVRARNGSVLGKGS---ILKM 835
PE+ ++ A+M + G ++ KG+ ++
Sbjct: 455 PELYRLQ---------------------------AIMNSSELTITGDLITKGTRVLVVDE 487
Query: 836 YFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISGAKEMLAYL-GAKTKTEGSFSQK 894
F P S ++ + +V P+Y A P+ +L YL AK K +
Sbjct: 488 RFCPD--VLSTVKEMSVANFRRVPKMPIYGTAQPSSKALGSVLRYLTDAKRK-----HSR 540
Query: 895 VILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITGP-VVEHMEARLKEDILTEVRQS 953
++ LREE V+ N + LRE +D L V ++ P +E +E+ LK D+L +
Sbjct: 541 ILWVSLREEVVLEGNEQIYTLREPGS-LDQLIPVPVSTPEQLEKLESTLKGDLLKSQKW- 598
Query: 954 GGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRER 1013
E Y A Q + T E++ + +TYRRIP+
Sbjct: 599 -------LEVYLEAEKQMKMF--------KSCLTTQEIFNQHKSTCQGLTYRRIPIPDFC 643
Query: 1014 DALASDIDAI-----QYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQ 1068
D D + +DS ++F +G G AM I L L +F
Sbjct: 644 APKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTL---WHFNG---- 696
Query: 1069 SLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGA 1128
+P EE + S + + G++ ++ + ++L G + K +VD ++ +
Sbjct: 697 ------IPEMSEEEIVS--VPDAKYTKGEFEVVMKVVQLLPDGHRMKKEVDMALDTVSET 748
Query: 1129 G-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYCTSPA 1183
HLR+ I+ + + S + +++R L ++ L RY +LI F S+L+
Sbjct: 749 MTPMHYHLREIIICTYRQGR--SGKDEQERRLLRLRSLQYLERYIYLILFNSYLHLEKKD 806
Query: 1184 EIN--FKSWM 1191
F WM
Sbjct: 807 SWQRPFSLWM 816
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 155/377 (41%), Gaps = 61/377 (16%)
Query: 851 GAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYI- 908
GAP+ + G Y V+ M P++ G K +L K + EG ++ + +REE V+++
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQ----KLQREGH--KECVFFCVREEPVLFLR 171
Query: 909 ---NGTPFVLR---ELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHR- 961
+ P+ R L++ + +L+ G VE +E ++++I + S G ++
Sbjct: 172 VESDFVPYTPRGKENLHENLHSLRR----GLRVEDLELTIRKEIHDFAQLSEGVYYVYND 227
Query: 962 -EEYNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDI 1020
E + + V G +D+ EVY Y R+PL + L
Sbjct: 228 IERFRDEPHTVRVQG------EEDIHVTEEVYRRPIFLLPTYRYHRLPLPVDGAPLEEQF 281
Query: 1021 DAIQYCKDDSAG-----------CYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQS 1069
DA +S+G LF TG G AMA+ L L A K
Sbjct: 282 DAFICFLRESSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTLILHHHRGAAPK---- 337
Query: 1070 LVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG 1129
P P + +P A +R I + ++ G Q +VD++I C+
Sbjct: 338 ---PDPP--HPAKMPPRAR---------FRVIQSFIEMVPKGQQMVEEVDSVIASCSEMH 383
Query: 1130 HLRDDILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA-- 1183
+++ I ++L+ +Y Q + Y + +++L RYF+LI F +L+ P
Sbjct: 384 DMKEAIYESKKKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFYLIAFNYYLHEQYPLGF 443
Query: 1184 EINFKSWMDGRPELGHL 1200
++F WM PEL L
Sbjct: 444 ALSFSRWMCRHPELYRL 460
>sp|Q803E0|PALD_DANRE Paladin OS=Danio rerio GN=pald1 PE=2 SV=1
Length = 860
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 162/644 (25%), Positives = 288/644 (44%), Gaps = 96/644 (14%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ+ ++G+ ++ G + VL+ + Q G + +V++ LREEPVV+++ +
Sbjct: 110 GAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL--QTRGHQ-EVIFFCLREEPVVFLHLQE 166
Query: 102 ---PFVLRDVGRPFSNLEYTGINR-ARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQ 157
P+ R NL++ + R A E +E +++++ A N V +++ +
Sbjct: 167 DFLPYTPRRKENLHENLQH--LQRGASSEDLELTIRKELHDFAKLNDNMFYVYNDIEHLK 224
Query: 158 MVDQWEPV-SCDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT- 215
Q + S + + +VY + Y R+P+ E +P E+ FD V + +
Sbjct: 225 GEPQKICICSEEDIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQFDAFVKVLRENP 284
Query: 216 --DLNTE-------VIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGS 266
LN + ++F+CQ+G GRT G+++ TLV ++ + R +
Sbjct: 285 SLSLNRDASRLLPALLFSCQVGVGRTNLGLILGTLVMMH------------LTRTTAEKT 332
Query: 267 SVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRN 326
+ A+ E I ++ VI SL L G E +V++ ID C+ M ++RE+I +
Sbjct: 333 TPAEEEVKDEHKI---QFRVIESLIGKLPKGQEVMEEVNRAIDLCSEMHDIRESIYENKQ 389
Query: 327 SILRQPDEMKRQASLS--FF----VEYLERYYFLICFAVYIHTERAALCSSSFGHSSFAD 380
+ ++ + Q S + +F ++ LERY++LI F Y+H E+ L + SF+
Sbjct: 390 KLEGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLH-EQYPLAFA----CSFSQ 444
Query: 381 WMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQVLG 440
W+ + +Y + L M +S P ++ + +VL
Sbjct: 445 WLCSNAWIYRL---------------------LSCMNQSELRAPADL----VTKGARVLV 479
Query: 441 SQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHFK-G 499
+ L D + + NFR V +YG+A PT + V+ + K
Sbjct: 480 ADEYLAPDVLSTIKEMKV-------ANFRRVPKMSIYGMAQPTSEAASVVLAYLCDEKRK 532
Query: 500 CCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDILREA 559
V W N+++E ++ N + F RE R + + E ++ +EA LK +L A
Sbjct: 533 HSSVLWVNLQDELLLEANNQIFSPREPTR-VEQCIRVCSAQPEDIQSLEASLKAQLL--A 589
Query: 560 ERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAP 619
+ + + E I +S T E+F L+ ++Y R+P + AP
Sbjct: 590 SQQWLEVTLEQEKQMKMI---------KSCSTVQEIFNQLKSSHHALQYRRIPFPECSAP 640
Query: 620 KTSDFD-MLAVNIASASKD--TAFVFNCQMGRGRTTTGTVIACL 660
FD +L V A+ ++D +AFVFNC G+ RTTT VIA L
Sbjct: 641 SEEGFDQLLDVMKATLAEDSLSAFVFNCSNGKARTTTAMVIATL 684
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 38/328 (11%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + ++G+A PT E VL ++ +K K VLW++L++E ++ N + F R
Sbjct: 499 NFRRVPKMSIYGMAQPTSEAASVVLAYLCDEKR-KHSSVLWVNLQDELLLEANNQIFSPR 557
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
+ R + ++ +EA LK ++ A++ ++ + E +M+ S
Sbjct: 558 EPTRVEQCIRVCSAQPEDIQSLEASLKAQLL--ASQQWLEVTLEQE-KQMKMIK-----S 609
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
C +V+ +++ +L+ + + Y R+P + +P E+ FD L+D + T D + +F
Sbjct: 610 CSTVQ---EIFNQLKSSHHALQYRRIPFPECSAPSEEGFDQLLDVMKATLAEDSLSAFVF 666
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
NC G+ RTTT MVIATL + +G P D SV D +GE
Sbjct: 667 NCSNGKARTTTAMVIATLTLWH---FNGFPEFCE-----DEIVSVPD------AKYTKGE 712
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNSILRQPDEMKR 337
+ V+ L R+L G KR+VD +D + +LRE I TYR + D
Sbjct: 713 FEVVMKLVRLLPDGQRMKREVDAALDSVSETMTPLHYHLREIIICTYRQIRSCKSDAELL 772
Query: 338 QASLSFFVEYLERYYFLICFAVYIHTER 365
YLERY +LI + Y+H E+
Sbjct: 773 ALQAL---LYLERYIYLILYNSYLHLEK 797
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 170/777 (21%), Positives = 297/777 (38%), Gaps = 154/777 (19%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRIGHFKGCCPVFWHNMREEPVIYINGK--- 519
GAPNFR+ G FP+YG+ ++ G + V+ + +G V + +REEPV++++ +
Sbjct: 110 GAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL-QTRGHQEVIFFCLREEPVVFLHLQEDF 168
Query: 520 -PFVLREVERPYKNMLEYT-GIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQ- 576
P+ R E ++N+ G E +E I +E + + ND
Sbjct: 169 LPYTPRRKENLHENLQHLQRGASSEDLELT-------IRKELHDFA-------KLNDNMF 214
Query: 577 -IFDAWEHVSSESVQTPLEVFKCLEDD-------------GFP-IKYARVPITDGKAPKT 621
+++ EH+ E P ++ C E+D P +Y R+P+ AP
Sbjct: 215 YVYNDIEHLKGE----PQKICICSEEDIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPME 270
Query: 622 SDFDM----------LAVNIASASKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPI 671
FD L++N ++ A +F+CQ+G GRT G ++ L+ + +
Sbjct: 271 EQFDAFVKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLILGTLVMMHLTRTTAE 330
Query: 672 RVL--HEDVTHE-------------ELDSGSSSGEENGGNGAASTSSISKNIREAVLHYR 716
+ E+V E +L G EE N A S +IRE++ +
Sbjct: 331 KTTPAEEEVKDEHKIQFRVIESLIGKLPKGQEVMEE--VNRAIDLCSEMHDIRESIYENK 388
Query: 717 KVF-----NQQHVEPRVRMVALSRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTF 771
+ + Q + L + LERYF LI F AYL + F +F
Sbjct: 389 QKLEGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLHEQYPLAFA------CSF 442
Query: 772 KSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAVMEAIVRARNGSVLGKGS 831
WL + W R+ ELRAP A + + VL
Sbjct: 443 SQWL------CSNAWIYRLLS---CMNQSELRAP-----------ADLVTKGARVL---- 478
Query: 832 ILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISGAKEMLAYLGAKTKTEGSF 891
+ Y P S I+ + +V +Y MA PT A +LAYL + + S
Sbjct: 479 VADEYLAPD--VLSTIKEMKVANFRRVPKMSIYGMAQPTSEAASVVLAYLCDEKRKHSS- 535
Query: 892 SQKVILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVR 951
V+ +L++E ++ N F RE + ++ ++ +EA LK +L
Sbjct: 536 ---VLWVNLQDELLLEANNQIFSPREPTRVEQCIRVCSAQPEDIQSLEASLKAQLLAS-- 590
Query: 952 QSGGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTR 1011
Q + L +E+ S V E++ L+ + + YRRIP
Sbjct: 591 QQWLEVTLEQEKQMKMIKSCSTV--------------QEIFNQLKSSHHALQYRRIPFPE 636
Query: 1012 ----ERDALASDIDAIQ-YCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKV 1066
+ +D ++ +DS ++F G AM I L L F
Sbjct: 637 CSAPSEEGFDQLLDVMKATLAEDSLSAFVFNCSNGKARTTTAMVIATLTLWHFNGFPEFC 696
Query: 1067 PQSLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCA 1126
+V ++P + + G++ ++ L R+L G + K +VD ++ +
Sbjct: 697 EDEIV----------SVP-----DAKYTKGEFEVVMKLVRLLPDGQRMKREVDAALDSVS 741
Query: 1127 GAG-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGIKALRRYFFLITFRSFLY 1178
HLR+ I+ +++ ++ + + L RY +LI + S+L+
Sbjct: 742 ETMTPLHYHLREIIICTYRQIRSCKSDAELLAL----QALLYLERYIYLILYNSYLH 794
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 151/367 (41%), Gaps = 54/367 (14%)
Query: 850 HGAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYI 908
+GAP+ + G +P+Y M ++ G K +L L +T G Q+VI LREE VV++
Sbjct: 109 YGAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL----QTRGH--QEVIFFCLREEPVVFL 162
Query: 909 ----NGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHRE-E 963
+ P+ R + L+H+ G E +E +++++ + + ++ + E
Sbjct: 163 HLQEDFLPYTPRRKENLHENLQHLQ-RGASSEDLELTIRKELHDFAKLNDNMFYVYNDIE 221
Query: 964 YNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA- 1022
+ Q + E D+ EVY + Y R+PL E + DA
Sbjct: 222 HLKGEPQKICICSEE-----DIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQFDAF 276
Query: 1023 ---------IQYCKDDS--AGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLV 1071
+ +D S LF G G + + +LV
Sbjct: 277 VKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLIL----------------GTLV 320
Query: 1072 GPHLP-LTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGH 1130
HL T E+ P+ ++ HK+ +R I +L L G + +V+ I+ C+
Sbjct: 321 MMHLTRTTAEKTTPAEEEVKDEHKI-QFRVIESLIGKLPKGQEVMEEVNRAIDLCSEMHD 379
Query: 1131 LRDDILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPAEI- 1185
+R+ I ++L+ +Y Q + Y + +++L RYF+LI F ++L+ P
Sbjct: 380 IRESIYENKQKLEGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLHEQYPLAFA 439
Query: 1186 -NFKSWM 1191
+F W+
Sbjct: 440 CSFSQWL 446
>sp|P70261|PALD_MOUSE Paladin OS=Mus musculus GN=Pald1 PE=1 SV=1
Length = 859
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 192/789 (24%), Positives = 315/789 (39%), Gaps = 156/789 (19%)
Query: 44 GAPNYRQA-DSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ L V G+ P++ G R VL+ + Q DG + + + +REEPVV++
Sbjct: 122 GAPNFRQVRGGLPVFGMGQPSLLGFRRVLQKL--QTDGLK-ECIIFCVREEPVVFLRAEE 178
Query: 102 ---PFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQM 158
+ RD NL + E +E ++++I A N V D +
Sbjct: 179 DFVSYTPRDKESLHENLRDPSPG-VKAENLELAIQKEIHDFAQLRDNVYHVYHNTEDLR- 236
Query: 159 VDQWEPVSC-----DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKIS 213
EP + D V +V++ + Y +P+ ++ P E FD V +
Sbjct: 237 ---GEPHTVAIRGEDGVCVTEEVFKRPLLLQPTYRYHHLPLPEQGPPLEAQFDAFVSVLR 293
Query: 214 QTDLNT----------EVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFD 263
+T ++F+CQ G GRT GMV+ TLV + RT S +
Sbjct: 294 ETPSLLPLRDNHGPLPALLFSCQSGVGRTNLGMVLGTLVMFHH------SRTTS---QLE 344
Query: 264 SGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIAT 323
+ S +A LP ++ VI+ + G + +VD+ I CA + +L+E +
Sbjct: 345 AASPLAKPLPME-------QFQVIQGFICKVPQGKKMVEEVDRAISACAELHDLKEEVLK 397
Query: 324 YRNSI------LRQPDEMKRQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSS 377
+ + R + +QA + LE Y++L+ F Y+H E+ L + S
Sbjct: 398 NQRRLESFRPESRGQECGSQQAVQQRALWSLELYFYLLLFNYYLH-EQYPLAFA----LS 452
Query: 378 FADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQ 437
F+ W+ PELY ++ E+ V L G
Sbjct: 453 FSRWLCTHPELYRLLV--------------------------------ELNSVGPLVPGD 480
Query: 438 VLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHF 497
++ + L++D S ++ A NFR V P+YG A P+ + +++ +
Sbjct: 481 LIAKGS-LEADDLVSLDALSTVREMDVA-NFRRVPRMPIYGTAQPSAKALGNILAYLSDA 538
Query: 498 K-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDIL 556
K V W +REE V+ +G L + E + +EA+LK +
Sbjct: 539 KRKLRQVVWIFLREEVVLECDGHTHSLWP---------PGPALAPEHLVALEAQLKAHL- 588
Query: 557 REAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDG 616
A + ++ F + T EVF + + Y R+P+ D
Sbjct: 589 -------SAPVPNTKSPTAPRF--------QKCLTTQEVFSQHQGACLGLTYCRIPVPDF 633
Query: 617 KAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRV 673
AP+ DFD L + A+ +KD T FVF+C G+GRTTT V+A L I G P
Sbjct: 634 CAPREEDFDRLLEALRAALTKDPGTGFVFSCLSGQGRTTTAMVVAVLACWHIG-GCP--- 689
Query: 674 LHEDVTHEEL----DSGSSSGE-----------ENGGNGA----ASTSSISKNIREAVLH 714
+V EEL D+ + GE +G + A+ +S+ + H
Sbjct: 690 ---EVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYH 746
Query: 715 YRKVFNQQHVEPRVRMVALS------RGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESR 768
R++ + + + A R +YLERY LI F AYL E + +
Sbjct: 747 LREIIISTYRQAKATKEAQEAQRLQLRSLQYLERYIYLILFNAYLRLEKTSSW------Q 800
Query: 769 MTFKSWLRQ 777
F +W+R+
Sbjct: 801 RPFSTWMRE 809
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 59/362 (16%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + ++G A P+ + + N+L ++ K R QV+WI LREE V+ +G L
Sbjct: 508 NFRRVPRMPIYGTAQPSAKALGNILAYLSDAKRKLR-QVVWIFLREEVVLECDGHTHSLW 566
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
G + + + A + A RF K L T E
Sbjct: 567 PPGPALAPEHLVALEAQLKAHLSAPVPNTKSPTAPRF-QKCLTTQE-------------- 611
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
V+ + Q + Y R+PV D +P+E+DFD L++ + D T +F
Sbjct: 612 ---------VFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPGTGFVF 662
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
+C G+GRTTT MV+A L + IG + G ++P+++ +GE
Sbjct: 663 SCLSGQGRTTTAMVVAVLACWH------------IGGCPEVGEEELVSVPDAK--FTKGE 708
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMK 336
+ V+ + ++L G K++VD +D + +LRE I+TYR + ++ E +
Sbjct: 709 FQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKATKEAQEAQ 768
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIR 393
R S ++YLERY +LI F Y+ E+ +S F+ WM+ + +Y I+
Sbjct: 769 RLQLRS--LQYLERYIYLILFNAYLRLEK-----TSSWQRPFSTWMREVATKAGIYEILN 821
Query: 394 RL 395
+L
Sbjct: 822 QL 823
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 137/354 (38%), Gaps = 76/354 (21%)
Query: 857 KVDGYPVYSMATPTISGAKEMLAYLG-AKTKTEGSFSQKVILTDLREEAVVYINGTPFVL 915
+V P+Y A P+ +LAYL AK K ++V+ LREE V+ +G L
Sbjct: 511 RVPRMPIYGTAQPSAKALGNILAYLSDAKRKL-----RQVVWIFLREEVVLECDGHTHSL 565
Query: 916 RELNKPVDTLKHVGITGPVV--EHM---EARLKEDILTEVRQSGGRMLLHREEYNPASNQ 970
GP + EH+ EA+LK + V P +
Sbjct: 566 WP-------------PGPALAPEHLVALEAQLKAHLSAPV---------------PNTKS 597
Query: 971 SSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI------Q 1024
+ + + + T EV++ Q +TY RIP+ D D +
Sbjct: 598 PTAPRFQKCL------TTQEVFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAA 651
Query: 1025 YCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLP 1084
KD G ++F +G G AM + L P+ VG EE L
Sbjct: 652 LTKDPGTG-FVFSCLSGQGRTTTAMVVAVL----ACWHIGGCPE--VG-------EEELV 697
Query: 1085 SWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYS 1139
S D + K G+++ ++ + ++L G K +VD ++ + HLR+ I+
Sbjct: 698 S-VPDAKFTK-GEFQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTY 755
Query: 1140 EELKKFSNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYC--TSPAEINFKSWM 1191
+ K + QR L ++ L RY +LI F ++L TS + F +WM
Sbjct: 756 RQAKATKEAQEAQRLQLR--SLQYLERYIYLILFNAYLRLEKTSSWQRPFSTWM 807
>sp|Q79LY0|HOPD2_PSESM Effector protein hopD2 OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=hopD2 PE=1 SV=1
Length = 468
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 61 IPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLRDVGRPFSNLEYTGI 120
I ++E ++++ +G G + VL LREE +NG P LR +++
Sbjct: 231 ISSVEQVKSIRAALG----GGPLTVL--DLREESHAIVNGLPITLR------GPMDWAN- 277
Query: 121 NRARVEQMEARLKED-IIMEAARFGNKILVTDELPDGQMVD-QWEPVSCDSVKAPLDVYE 178
A + Q++ +E +I E R + LV G+ + Q + +V++ +V
Sbjct: 278 --AGLSQVDGAARESAMITELKRTKSLTLVDANYVKGKKSNPQTTELKNLNVRSEREVVT 335
Query: 179 ELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT-DLNTEVIFNCQMGRGRTTTGMV 237
E Y RV +TD P + D LVD + N ++ +C GRGRTTT M+
Sbjct: 336 EAGAT-----YRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMI 390
Query: 238 IATLV 242
+ ++
Sbjct: 391 MVDML 395
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 608 YARVPITDGKAPKTSDFDMLAVNIA--SASKDTAFVFNCQMGRGRTTTGTVIACLLK 662
Y RV ITD P D L V+I + + V +C GRGRTTT ++ +LK
Sbjct: 341 YRRVAITDHNRPSPEATDEL-VDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDMLK 396
>sp|Q57668|Y215_METJA Uncharacterized protein MJ0215 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0215 PE=4 SV=1
Length = 159
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 192 VPVTDEKSPKEQDFDILVDKIS-QTDLNTEVIFNCQMGRGRTTTGMVIATLVYLNRI 247
VP+ D P +D D++VD I EV+ +C G GR TG V+A LN I
Sbjct: 70 VPIEDYGIPTVEDMDLIVDFIKYHVSKEKEVVVSCIGGHGR--TGTVLAVWAGLNGI 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,436,249
Number of Sequences: 539616
Number of extensions: 20853472
Number of successful extensions: 50879
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 50762
Number of HSP's gapped (non-prelim): 46
length of query: 1208
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1079
effective length of database: 121,958,995
effective search space: 131593755605
effective search space used: 131593755605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)