Query 000959
Match_columns 1208
No_of_seqs 276 out of 1137
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 03:28:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 1E-55 3.6E-60 499.7 28.0 287 901-1206 5-414 (442)
2 3ef0_A RNA polymerase II subun 100.0 1.6E-53 5.6E-58 473.1 29.1 283 911-1207 9-346 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 3.6E-33 1.2E-37 288.6 13.1 159 917-1141 31-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 1.5E-30 5.1E-35 261.1 11.9 166 917-1137 12-180 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 1.4E-29 4.7E-34 276.9 4.8 163 917-1138 137-309 (320)
6 2hhl_A CTD small phosphatase-l 99.9 3.5E-27 1.2E-31 240.4 12.9 157 917-1119 25-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 98.7 1.2E-08 4E-13 94.8 6.0 64 1139-1207 11-77 (107)
8 2d8m_A DNA-repair protein XRCC 98.6 4E-08 1.4E-12 94.5 5.8 63 1140-1207 19-81 (129)
9 3l46_A Protein ECT2; alternati 98.2 7.2E-08 2.5E-12 92.2 -2.3 70 1133-1207 11-80 (112)
10 3pa6_A Microcephalin; BRCT dom 98.1 2E-06 6.8E-11 81.5 5.7 68 1139-1207 3-70 (107)
11 2cou_A ECT2 protein; BRCT doma 98.1 2.1E-07 7E-12 87.5 -1.7 63 1140-1207 9-71 (109)
12 4id3_A DNA repair protein REV1 98.1 3.2E-06 1.1E-10 75.2 5.3 58 1140-1202 4-63 (92)
13 3olc_X DNA topoisomerase 2-bin 97.9 5.7E-06 2E-10 89.9 3.9 65 1138-1207 194-259 (298)
14 1l0b_A BRCA1; TANDEM-BRCT, thr 97.9 9.5E-06 3.2E-10 83.0 4.9 63 1140-1207 1-69 (229)
15 3olc_X DNA topoisomerase 2-bin 97.8 1.1E-05 3.7E-10 87.8 5.4 61 1142-1207 104-164 (298)
16 1l7b_A DNA ligase; BRCT, autos 97.8 1.2E-05 4.1E-10 74.5 3.8 62 1142-1208 6-67 (92)
17 3pc6_A DNA repair protein XRCC 97.8 2.5E-05 8.7E-10 74.0 6.0 60 1142-1205 6-65 (104)
18 1wf6_A Similar to S.pombe -RAD 97.8 5.2E-06 1.8E-10 80.2 1.0 63 1136-1204 33-95 (132)
19 2ebw_A DNA repair protein REV1 97.7 2E-05 6.9E-10 71.4 4.7 58 1141-1203 10-68 (97)
20 2k6g_A Replication factor C su 97.7 5.7E-05 2E-09 72.0 7.3 62 1142-1207 31-93 (109)
21 2ebu_A Replication factor C su 97.6 6.5E-05 2.2E-09 72.2 6.6 62 1142-1207 21-83 (112)
22 1t15_A Breast cancer type 1 su 97.6 4.6E-05 1.6E-09 76.7 5.1 58 1145-1207 3-66 (214)
23 2etx_A Mediator of DNA damage 97.5 0.00012 4E-09 75.2 6.3 60 1139-1207 5-65 (209)
24 3m9l_A Hydrolase, haloacid deh 97.3 0.00027 9.2E-09 68.6 6.3 86 971-1061 67-155 (205)
25 2cok_A Poly [ADP-ribose] polym 97.3 0.00018 6.2E-09 69.2 4.6 62 1142-1208 9-73 (113)
26 2wm8_A MDP-1, magnesium-depend 97.2 0.00042 1.4E-08 67.9 6.2 80 972-1061 66-148 (187)
27 3sqd_A PAX-interacting protein 97.2 0.00017 6E-09 75.1 3.6 62 1140-1207 10-72 (219)
28 2fpr_A Histidine biosynthesis 97.2 0.0018 6.2E-08 63.7 10.6 112 917-1060 11-143 (176)
29 3al2_A DNA topoisomerase 2-bin 97.1 0.00039 1.3E-08 73.3 5.5 61 1142-1207 5-68 (235)
30 3ib6_A Uncharacterized protein 97.0 0.00071 2.4E-08 66.5 6.2 83 973-1059 33-123 (189)
31 2jw5_A DNA polymerase lambda; 97.0 0.00027 9.1E-09 66.7 3.0 57 1139-1199 7-64 (106)
32 3m1y_A Phosphoserine phosphata 96.9 0.00064 2.2E-08 65.8 4.3 48 973-1021 74-122 (217)
33 3kzx_A HAD-superfamily hydrola 96.8 0.0018 6.2E-08 63.4 7.1 85 972-1061 101-188 (231)
34 2pib_A Phosphorylated carbohyd 96.8 0.00074 2.5E-08 64.1 3.6 84 973-1061 83-168 (216)
35 3l8h_A Putative haloacid dehal 96.7 0.0024 8.1E-08 61.3 7.0 106 921-1060 2-128 (179)
36 2gmw_A D,D-heptose 1,7-bisphos 96.7 0.0022 7.6E-08 64.3 6.8 67 918-1013 23-105 (211)
37 2pr7_A Haloacid dehalogenase/e 96.6 0.00023 8E-09 64.3 -0.9 83 975-1062 19-103 (137)
38 3l41_A BRCT-containing protein 96.5 0.0013 4.6E-08 68.9 3.5 57 1142-1207 4-61 (220)
39 3um9_A Haloacid dehalogenase, 96.4 0.0014 4.7E-08 63.6 3.1 83 973-1060 95-179 (230)
40 3u3z_A Microcephalin; DNA repa 96.0 0.0046 1.6E-07 63.5 4.5 58 1145-1207 10-69 (199)
41 4eze_A Haloacid dehalogenase-l 95.9 0.0033 1.1E-07 68.2 3.3 49 973-1022 178-227 (317)
42 1dgs_A DNA ligase; AMP complex 95.9 0.0024 8.1E-08 76.9 2.1 62 1142-1208 586-647 (667)
43 2p9j_A Hypothetical protein AQ 95.9 0.012 4.2E-07 55.8 6.6 101 920-1061 9-111 (162)
44 3nuq_A Protein SSM1, putative 95.8 0.0018 6.1E-08 66.2 0.7 83 973-1060 141-232 (282)
45 2owo_A DNA ligase; protein-DNA 95.7 0.0035 1.2E-07 75.4 2.5 63 1142-1208 596-658 (671)
46 3zvl_A Bifunctional polynucleo 95.7 0.024 8.1E-07 63.7 8.9 111 918-1060 56-184 (416)
47 4dcc_A Putative haloacid dehal 95.7 0.0019 6.3E-08 64.0 -0.0 84 974-1061 112-201 (229)
48 3dv9_A Beta-phosphoglucomutase 95.7 0.0058 2E-07 59.9 3.4 84 973-1061 107-193 (247)
49 1nnl_A L-3-phosphoserine phosp 95.5 0.015 5.2E-07 57.1 5.8 49 973-1021 85-135 (225)
50 3skx_A Copper-exporting P-type 95.5 0.051 1.7E-06 54.7 9.6 44 974-1018 144-188 (280)
51 3ii6_X DNA ligase 4; XRCC4, NH 95.4 0.0098 3.4E-07 63.5 4.3 63 1138-1206 5-68 (263)
52 1kzy_C Tumor suppressor P53-bi 95.4 0.017 5.8E-07 61.6 6.0 67 1141-1207 13-110 (259)
53 3iru_A Phoshonoacetaldehyde hy 95.2 0.014 4.7E-07 58.2 4.4 84 973-1060 110-196 (277)
54 2i7d_A 5'(3')-deoxyribonucleot 95.2 0.0051 1.8E-07 60.3 1.2 39 973-1011 72-112 (193)
55 2o2x_A Hypothetical protein; s 95.1 0.02 6.9E-07 57.3 5.4 64 919-1011 30-109 (218)
56 2vxb_A DNA repair protein RHP9 94.8 0.038 1.3E-06 58.4 6.6 62 1143-1208 2-92 (241)
57 2coe_A Deoxynucleotidyltransfe 94.7 0.024 8.1E-07 55.3 4.4 55 1142-1200 19-74 (120)
58 1k1e_A Deoxy-D-mannose-octulos 94.6 0.057 1.9E-06 52.9 6.8 101 920-1061 8-110 (180)
59 2oda_A Hypothetical protein ps 94.5 0.019 6.5E-07 57.7 3.3 79 973-1061 35-116 (196)
60 3nvb_A Uncharacterized protein 94.0 0.046 1.6E-06 62.1 5.4 116 913-1063 215-341 (387)
61 2i33_A Acid phosphatase; HAD s 93.6 0.072 2.5E-06 56.6 5.8 85 916-1013 55-144 (258)
62 3ii6_X DNA ligase 4; XRCC4, NH 93.3 0.094 3.2E-06 56.0 6.1 56 1140-1195 161-221 (263)
63 2b0c_A Putative phosphatase; a 93.2 0.003 1E-07 60.6 -5.0 85 972-1061 89-176 (206)
64 3mn1_A Probable YRBI family ph 92.5 0.12 4.2E-06 51.2 5.2 101 920-1061 19-121 (189)
65 1z56_C DNA ligase IV; DNA repa 92.4 0.035 1.2E-06 58.4 1.3 52 1140-1195 157-208 (264)
66 3p96_A Phosphoserine phosphata 92.3 0.18 6E-06 55.9 6.8 47 973-1020 255-302 (415)
67 1q92_A 5(3)-deoxyribonucleotid 92.2 0.043 1.5E-06 54.1 1.5 38 973-1010 74-113 (197)
68 3mmz_A Putative HAD family hyd 92.1 0.16 5.4E-06 49.9 5.4 65 982-1061 47-113 (176)
69 3e8m_A Acylneuraminate cytidyl 91.6 0.31 1.1E-05 46.2 6.7 113 920-1073 4-118 (164)
70 3bwv_A Putative 5'(3')-deoxyri 91.4 0.17 5.8E-06 48.9 4.7 27 973-999 68-94 (180)
71 3ocu_A Lipoprotein E; hydrolas 90.6 0.19 6.4E-06 54.5 4.5 88 917-1025 55-156 (262)
72 3pct_A Class C acid phosphatas 90.1 0.27 9.2E-06 53.2 5.2 75 917-1011 55-143 (260)
73 3n07_A 3-deoxy-D-manno-octulos 89.8 0.11 3.9E-06 52.5 1.9 66 982-1061 60-127 (195)
74 3e58_A Putative beta-phosphogl 89.7 0.35 1.2E-05 45.6 5.2 84 973-1061 88-173 (214)
75 3s6j_A Hydrolase, haloacid deh 89.7 0.31 1.1E-05 47.1 4.9 84 973-1061 90-175 (233)
76 2ep8_A Pescadillo homolog 1; A 89.7 0.27 9.1E-06 46.2 4.2 48 1141-1195 10-68 (100)
77 2r8e_A 3-deoxy-D-manno-octulos 89.5 0.66 2.3E-05 45.7 7.1 67 981-1061 60-128 (188)
78 3ij5_A 3-deoxy-D-manno-octulos 89.3 0.32 1.1E-05 49.9 4.9 103 920-1063 49-153 (211)
79 2b82_A APHA, class B acid phos 89.2 0.069 2.4E-06 54.3 -0.1 38 974-1011 88-126 (211)
80 3kbb_A Phosphorylated carbohyd 89.2 0.25 8.6E-06 48.0 3.8 84 973-1061 83-168 (216)
81 3qnm_A Haloacid dehalogenase-l 89.2 0.35 1.2E-05 46.8 4.8 83 973-1060 106-189 (240)
82 3ed5_A YFNB; APC60080, bacillu 89.2 0.38 1.3E-05 46.7 5.0 83 973-1060 102-186 (238)
83 2hsz_A Novel predicted phospha 88.6 0.47 1.6E-05 47.7 5.5 84 973-1061 113-198 (243)
84 3n1u_A Hydrolase, HAD superfam 88.6 0.16 5.5E-06 50.7 2.0 66 982-1061 54-121 (191)
85 2nyv_A Pgpase, PGP, phosphogly 88.6 0.42 1.5E-05 47.3 5.0 84 973-1061 82-167 (222)
86 2obb_A Hypothetical protein; s 88.5 0.58 2E-05 46.4 5.9 63 920-1015 3-66 (142)
87 2hoq_A Putative HAD-hydrolase 88.2 0.3 1E-05 48.5 3.6 83 973-1060 93-177 (241)
88 4ex6_A ALNB; modified rossman 88.1 0.43 1.5E-05 46.7 4.7 84 973-1061 103-188 (237)
89 3umb_A Dehalogenase-like hydro 88.0 0.47 1.6E-05 46.1 4.8 84 973-1061 98-183 (233)
90 2hdo_A Phosphoglycolate phosph 87.9 0.34 1.2E-05 46.7 3.8 84 973-1061 82-166 (209)
91 3kd3_A Phosphoserine phosphohy 86.9 0.87 3E-05 43.3 5.9 88 974-1061 82-175 (219)
92 2gfh_A Haloacid dehalogenase-l 86.9 0.37 1.3E-05 49.6 3.5 82 973-1059 120-202 (260)
93 2dun_A POL MU, DNA polymerase 86.8 0.17 5.9E-06 50.3 1.0 52 1143-1197 10-61 (133)
94 4eek_A Beta-phosphoglucomutase 86.7 0.31 1.1E-05 48.7 2.8 86 973-1061 109-196 (259)
95 3mc1_A Predicted phosphatase, 86.5 0.33 1.1E-05 47.0 2.8 81 973-1061 85-170 (226)
96 1zrn_A L-2-haloacid dehalogena 86.4 0.54 1.9E-05 45.9 4.3 83 973-1060 94-178 (232)
97 1te2_A Putative phosphatase; s 85.9 0.81 2.8E-05 43.7 5.1 84 973-1061 93-178 (226)
98 2no4_A (S)-2-haloacid dehaloge 85.6 0.6 2.1E-05 46.1 4.2 83 973-1060 104-188 (240)
99 1rku_A Homoserine kinase; phos 85.3 1.2 4.1E-05 43.0 6.1 86 973-1061 68-156 (206)
100 3pc7_A DNA ligase 3; DNA repai 85.0 0.4 1.4E-05 44.7 2.4 46 1142-1193 15-61 (88)
101 2ah5_A COG0546: predicted phos 84.9 0.53 1.8E-05 46.2 3.4 82 973-1061 83-165 (210)
102 3ddh_A Putative haloacid dehal 84.8 0.7 2.4E-05 44.2 4.1 78 973-1060 104-184 (234)
103 2hi0_A Putative phosphoglycola 84.7 1.1 3.7E-05 44.8 5.6 82 973-1060 109-192 (240)
104 3u26_A PF00702 domain protein; 84.4 0.45 1.5E-05 46.1 2.6 83 973-1060 99-182 (234)
105 1l6r_A Hypothetical protein TA 84.3 0.76 2.6E-05 46.9 4.3 57 921-1014 6-63 (227)
106 2go7_A Hydrolase, haloacid deh 84.2 0.97 3.3E-05 42.3 4.7 83 973-1061 84-168 (207)
107 3kc2_A Uncharacterized protein 83.3 1.7 5.9E-05 48.3 7.0 55 919-1011 12-71 (352)
108 3sd7_A Putative phosphatase; s 83.2 0.75 2.6E-05 45.3 3.6 81 973-1061 109-195 (240)
109 1qq5_A Protein (L-2-haloacid d 82.8 0.85 2.9E-05 45.8 3.9 82 973-1060 92-174 (253)
110 1yns_A E-1 enzyme; hydrolase f 82.3 0.8 2.7E-05 47.5 3.6 83 973-1061 129-215 (261)
111 2i6x_A Hydrolase, haloacid deh 81.9 0.42 1.4E-05 46.0 1.2 85 972-1061 87-178 (211)
112 1z56_C DNA ligase IV; DNA repa 81.9 0.2 6.9E-06 52.6 -1.1 65 1141-1206 3-74 (264)
113 1wr8_A Phosphoglycolate phosph 81.7 1.8 6E-05 43.8 5.8 57 921-1014 4-61 (231)
114 3smv_A S-(-)-azetidine-2-carbo 81.0 0.99 3.4E-05 43.5 3.5 81 973-1060 98-182 (240)
115 1xvi_A MPGP, YEDP, putative ma 80.9 2.2 7.6E-05 44.5 6.4 59 919-1014 8-67 (275)
116 2zg6_A Putative uncharacterize 80.1 2.4 8E-05 41.8 5.9 82 972-1061 93-175 (220)
117 3d6j_A Putative haloacid dehal 79.8 2 6.8E-05 40.9 5.1 84 973-1061 88-173 (225)
118 2pke_A Haloacid delahogenase-l 79.4 1.3 4.4E-05 44.2 3.8 78 973-1060 111-189 (251)
119 1xpj_A Hypothetical protein; s 79.3 1.1 3.6E-05 42.4 3.0 62 922-1014 3-77 (126)
120 3umc_A Haloacid dehalogenase; 78.7 0.99 3.4E-05 44.4 2.7 82 973-1061 119-201 (254)
121 2om6_A Probable phosphoserine 78.6 1.3 4.4E-05 42.7 3.5 81 975-1060 100-185 (235)
122 3mpo_A Predicted hydrolase of 78.5 2.5 8.7E-05 43.1 5.8 57 920-1013 5-62 (279)
123 2w43_A Hypothetical 2-haloalka 78.3 0.89 3E-05 43.8 2.2 82 973-1061 73-154 (201)
124 2fea_A 2-hydroxy-3-keto-5-meth 77.6 2.4 8.1E-05 42.6 5.1 38 973-1010 76-114 (236)
125 3qbz_A DDK kinase regulatory s 77.1 3.9 0.00013 41.9 6.5 54 1141-1195 56-118 (160)
126 3cnh_A Hydrolase family protei 76.7 0.98 3.4E-05 43.2 2.0 84 973-1061 85-169 (200)
127 3qxg_A Inorganic pyrophosphata 76.6 1.3 4.5E-05 43.7 3.0 84 973-1061 108-194 (243)
128 2hcf_A Hydrolase, haloacid deh 76.6 3.6 0.00012 39.8 6.0 82 973-1061 92-181 (234)
129 4dw8_A Haloacid dehalogenase-l 76.5 2.6 8.9E-05 43.0 5.2 56 920-1012 5-61 (279)
130 1nrw_A Hypothetical protein, h 76.5 2.7 9.2E-05 43.7 5.4 56 921-1013 5-61 (288)
131 3pgv_A Haloacid dehalogenase-l 76.3 2.3 7.9E-05 44.1 4.8 67 1135-1203 179-261 (285)
132 3dnp_A Stress response protein 76.2 3.1 0.00011 42.7 5.7 70 1130-1202 168-253 (290)
133 3fvv_A Uncharacterized protein 76.1 3.2 0.00011 40.7 5.5 48 974-1022 92-140 (232)
134 3umg_A Haloacid dehalogenase; 76.1 0.98 3.4E-05 44.1 1.8 82 973-1061 115-197 (254)
135 3epr_A Hydrolase, haloacid deh 75.4 2 6.8E-05 43.9 4.0 16 920-935 5-20 (264)
136 2fi1_A Hydrolase, haloacid deh 75.1 3.1 0.00011 39.1 5.0 80 975-1061 83-163 (190)
137 1nf2_A Phosphatase; structural 74.5 3.5 0.00012 42.5 5.5 57 921-1014 3-59 (268)
138 1zjj_A Hypothetical protein PH 73.8 3 0.0001 42.7 4.8 15 921-935 2-16 (263)
139 3qgm_A P-nitrophenyl phosphata 73.6 5.4 0.00019 40.4 6.6 16 920-935 8-23 (268)
140 1qyi_A ZR25, hypothetical prot 72.8 1.3 4.5E-05 49.9 2.1 52 973-1025 214-267 (384)
141 2pq0_A Hypothetical conserved 72.3 2.5 8.5E-05 42.9 3.8 15 921-935 4-18 (258)
142 2fue_A PMM 1, PMMH-22, phospho 72.1 3.4 0.00012 42.7 4.8 17 919-935 12-28 (262)
143 1s2o_A SPP, sucrose-phosphatas 71.7 2.9 9.8E-05 42.9 4.1 33 979-1011 24-56 (244)
144 3a1c_A Probable copper-exporti 71.2 7.1 0.00024 40.8 7.0 73 973-1061 162-235 (287)
145 3nas_A Beta-PGM, beta-phosphog 70.9 2.5 8.6E-05 41.1 3.3 79 975-1060 93-173 (233)
146 3dao_A Putative phosphatse; st 70.6 3.5 0.00012 42.7 4.5 68 1133-1202 179-262 (283)
147 1rkq_A Hypothetical protein YI 70.4 2.8 9.5E-05 43.7 3.7 15 921-935 6-20 (282)
148 2qlt_A (DL)-glycerol-3-phospha 70.0 5.2 0.00018 41.0 5.6 83 973-1061 113-205 (275)
149 1vjr_A 4-nitrophenylphosphatas 69.8 6.7 0.00023 39.7 6.3 17 919-935 16-32 (271)
150 2ho4_A Haloacid dehalogenase-l 69.7 4 0.00014 40.6 4.6 16 920-935 7-22 (259)
151 1l0b_A BRCA1; TANDEM-BRCT, thr 69.2 3.1 0.00011 42.4 3.7 50 1140-1193 114-168 (229)
152 2zos_A MPGP, mannosyl-3-phosph 69.2 6.7 0.00023 40.2 6.2 35 979-1013 22-57 (249)
153 2amy_A PMM 2, phosphomannomuta 68.9 5 0.00017 40.7 5.1 17 919-935 5-21 (246)
154 3k1z_A Haloacid dehalogenase-l 68.4 2.1 7.2E-05 43.5 2.3 82 973-1060 105-188 (263)
155 1l7m_A Phosphoserine phosphata 66.9 2.3 8E-05 40.3 2.1 46 973-1019 75-121 (211)
156 2hx1_A Predicted sugar phospha 66.7 9.3 0.00032 39.3 6.7 16 920-935 14-29 (284)
157 3sqd_A PAX-interacting protein 66.3 6.1 0.00021 41.2 5.2 64 1139-1207 118-194 (219)
158 2b30_A Pvivax hypothetical pro 63.9 5.2 0.00018 42.5 4.2 69 1131-1201 190-274 (301)
159 2etx_A Mediator of DNA damage 63.6 6.9 0.00024 40.0 4.9 71 1132-1207 103-177 (209)
160 3pdw_A Uncharacterized hydrola 63.2 2.9 9.9E-05 42.5 2.1 16 920-935 6-21 (266)
161 4ap9_A Phosphoserine phosphata 62.4 2.6 8.9E-05 39.7 1.5 81 973-1061 78-161 (201)
162 3ewi_A N-acylneuraminate cytid 61.6 5.9 0.0002 39.4 3.9 99 919-1061 8-110 (168)
163 2nte_A BARD-1, BRCA1-associate 61.0 7.4 0.00025 39.4 4.6 36 1141-1180 102-137 (210)
164 3oq4_A DBF4, protein DNA52; DD 60.6 9.9 0.00034 38.1 5.2 40 1168-1207 36-83 (134)
165 3huf_A DNA repair and telomere 59.9 5.3 0.00018 44.9 3.5 41 1166-1207 128-173 (325)
166 2rbk_A Putative uncharacterize 59.9 2.2 7.4E-05 43.6 0.4 15 921-935 3-17 (261)
167 1yv9_A Hydrolase, haloacid deh 59.8 7.1 0.00024 39.5 4.2 16 920-935 5-20 (264)
168 1kzy_C Tumor suppressor P53-bi 59.6 5.1 0.00018 42.7 3.3 62 1141-1207 153-226 (259)
169 3f9r_A Phosphomannomutase; try 59.4 8 0.00028 40.1 4.6 16 920-935 4-19 (246)
170 2fdr_A Conserved hypothetical 58.1 4 0.00014 39.3 2.0 83 973-1061 86-171 (229)
171 3l5k_A Protein GS1, haloacid d 58.1 3.1 0.00011 41.3 1.2 84 973-1061 111-201 (250)
172 1rlm_A Phosphatase; HAD family 58.0 4.6 0.00016 41.6 2.5 15 921-935 4-18 (271)
173 2wf7_A Beta-PGM, beta-phosphog 57.1 6.7 0.00023 37.4 3.3 82 973-1061 90-173 (221)
174 3oq0_A DBF4, protein DNA52; DD 56.6 12 0.0004 38.2 5.0 66 1141-1207 18-100 (151)
175 2oyc_A PLP phosphatase, pyrido 55.8 16 0.00055 38.2 6.2 16 920-935 21-36 (306)
176 3d6j_A Putative haloacid dehal 55.0 4.4 0.00015 38.6 1.6 16 920-935 6-21 (225)
177 1t15_A Breast cancer type 1 su 53.2 7.1 0.00024 39.1 2.9 41 1140-1184 112-152 (214)
178 1u02_A Trehalose-6-phosphate p 52.8 7.3 0.00025 39.8 3.0 34 976-1009 25-58 (239)
179 2hcf_A Hydrolase, haloacid deh 52.6 5.1 0.00017 38.7 1.7 16 920-935 4-19 (234)
180 2go7_A Hydrolase, haloacid deh 52.1 4.9 0.00017 37.5 1.4 15 921-935 5-19 (207)
181 2c4n_A Protein NAGD; nucleotid 51.7 5.3 0.00018 38.7 1.7 16 921-936 4-19 (250)
182 3i28_A Epoxide hydrolase 2; ar 51.5 5.7 0.00019 43.0 2.0 82 973-1061 99-188 (555)
183 3gyg_A NTD biosynthesis operon 51.4 5.7 0.0002 41.0 1.9 17 919-935 21-37 (289)
184 3e58_A Putative beta-phosphogl 50.8 5.1 0.00017 37.7 1.4 16 920-935 5-20 (214)
185 2fi1_A Hydrolase, haloacid deh 50.8 4.7 0.00016 37.9 1.1 16 920-935 6-21 (190)
186 3fzq_A Putative hydrolase; YP_ 50.4 5.1 0.00017 40.4 1.3 17 920-936 5-21 (274)
187 1ltq_A Polynucleotide kinase; 49.6 7 0.00024 40.8 2.3 53 973-1026 187-248 (301)
188 2p11_A Hypothetical protein; p 49.5 10 0.00034 37.7 3.3 77 973-1061 95-172 (231)
189 2p11_A Hypothetical protein; p 48.8 5.9 0.0002 39.3 1.5 17 919-935 10-26 (231)
190 2hdo_A Phosphoglycolate phosph 48.4 5.9 0.0002 38.1 1.4 15 921-935 5-19 (209)
191 2ah5_A COG0546: predicted phos 48.3 6.5 0.00022 38.4 1.7 16 920-935 4-19 (210)
192 1te2_A Putative phosphatase; s 48.2 5.5 0.00019 37.9 1.1 16 920-935 9-24 (226)
193 2w43_A Hypothetical 2-haloalka 47.9 6.3 0.00021 37.9 1.5 15 922-936 3-17 (201)
194 2wf7_A Beta-PGM, beta-phosphog 47.7 5 0.00017 38.3 0.7 15 921-935 3-17 (221)
195 1swv_A Phosphonoacetaldehyde h 47.6 12 0.0004 37.4 3.5 85 973-1061 102-189 (267)
196 2fdr_A Conserved hypothetical 47.6 6.1 0.00021 38.1 1.3 15 921-935 5-19 (229)
197 4g9b_A Beta-PGM, beta-phosphog 47.3 9.5 0.00032 38.5 2.8 81 974-1061 95-177 (243)
198 3ddh_A Putative haloacid dehal 47.3 5.8 0.0002 37.9 1.1 16 920-935 8-23 (234)
199 3kd3_A Phosphoserine phosphohy 47.1 6.9 0.00024 37.0 1.6 16 920-935 4-19 (219)
200 3mc1_A Predicted phosphatase, 47.0 5.9 0.0002 38.2 1.1 16 920-935 4-19 (226)
201 2i6x_A Hydrolase, haloacid deh 46.8 6.3 0.00022 37.8 1.3 15 921-935 6-20 (211)
202 4ex6_A ALNB; modified rossman 46.8 7.1 0.00024 38.0 1.7 18 918-935 17-34 (237)
203 3zx4_A MPGP, mannosyl-3-phosph 46.6 6.1 0.00021 40.3 1.2 15 921-935 1-15 (259)
204 3s6j_A Hydrolase, haloacid deh 46.5 7.3 0.00025 37.5 1.7 16 920-935 6-21 (233)
205 2pke_A Haloacid delahogenase-l 46.2 6.1 0.00021 39.3 1.1 16 920-935 13-28 (251)
206 1zrn_A L-2-haloacid dehalogena 46.2 6.8 0.00023 38.1 1.5 15 921-935 5-19 (232)
207 3ed5_A YFNB; APC60080, bacillu 46.0 6.3 0.00022 38.1 1.2 16 920-935 7-22 (238)
208 3vay_A HAD-superfamily hydrola 45.9 4 0.00014 39.5 -0.2 78 973-1060 104-182 (230)
209 2om6_A Probable phosphoserine 45.8 5.9 0.0002 38.1 0.9 15 921-935 5-19 (235)
210 4gib_A Beta-phosphoglucomutase 45.7 6.7 0.00023 39.7 1.4 82 973-1061 115-198 (250)
211 3cnh_A Hydrolase family protei 45.6 7 0.00024 37.3 1.4 16 920-935 4-19 (200)
212 3nas_A Beta-PGM, beta-phosphog 45.5 6 0.0002 38.5 0.9 15 921-935 3-17 (233)
213 3n28_A Phosphoserine phosphata 45.5 18 0.00062 38.5 4.7 47 973-1020 177-224 (335)
214 3fvv_A Uncharacterized protein 45.3 7.2 0.00025 38.2 1.5 16 920-935 4-19 (232)
215 2x4d_A HLHPP, phospholysine ph 44.7 7.4 0.00025 38.5 1.5 15 921-935 13-27 (271)
216 3umc_A Haloacid dehalogenase; 43.9 7.8 0.00027 38.1 1.5 17 919-935 21-37 (254)
217 1l7m_A Phosphoserine phosphata 43.8 32 0.0011 32.5 5.6 17 919-935 4-20 (211)
218 3smv_A S-(-)-azetidine-2-carbo 43.3 6.6 0.00022 37.8 0.8 16 920-935 6-21 (240)
219 2hsz_A Novel predicted phospha 43.1 8.8 0.0003 38.5 1.7 16 920-935 23-38 (243)
220 2hi0_A Putative phosphoglycola 42.8 8 0.00027 38.5 1.4 15 921-935 5-19 (240)
221 3vay_A HAD-superfamily hydrola 42.8 7.4 0.00025 37.6 1.1 15 921-935 3-17 (230)
222 3umb_A Dehalogenase-like hydro 42.7 9.5 0.00032 36.9 1.9 16 920-935 4-19 (233)
223 3kbb_A Phosphorylated carbohyd 42.5 8.2 0.00028 37.4 1.4 14 922-935 3-16 (216)
224 1swv_A Phosphonoacetaldehyde h 42.4 8 0.00027 38.6 1.3 15 921-935 7-21 (267)
225 3umg_A Haloacid dehalogenase; 42.0 7.3 0.00025 37.9 0.9 16 920-935 15-30 (254)
226 4eek_A Beta-phosphoglucomutase 41.9 9.8 0.00033 37.9 1.9 17 919-935 27-43 (259)
227 3l5k_A Protein GS1, haloacid d 41.8 8.6 0.00029 38.1 1.4 17 919-935 29-45 (250)
228 3u26_A PF00702 domain protein; 41.6 7.7 0.00026 37.5 1.0 15 921-935 3-17 (234)
229 2hoq_A Putative HAD-hydrolase 41.6 7.5 0.00026 38.4 0.9 15 921-935 3-17 (241)
230 2zg6_A Putative uncharacterize 41.5 9.5 0.00033 37.4 1.7 15 921-935 4-18 (220)
231 2no4_A (S)-2-haloacid dehaloge 41.4 8.7 0.0003 37.8 1.4 16 920-935 14-29 (240)
232 3sd7_A Putative phosphatase; s 41.3 9.5 0.00033 37.4 1.7 16 920-935 29-44 (240)
233 2qlt_A (DL)-glycerol-3-phospha 40.3 9.1 0.00031 39.2 1.4 15 921-935 36-50 (275)
234 3qnm_A Haloacid dehalogenase-l 40.3 8.5 0.00029 37.1 1.1 16 920-935 5-20 (240)
235 3qxg_A Inorganic pyrophosphata 39.8 9.6 0.00033 37.6 1.4 16 920-935 24-39 (243)
236 3l7y_A Putative uncharacterize 39.7 8.7 0.0003 40.2 1.1 16 920-935 37-52 (304)
237 4gib_A Beta-phosphoglucomutase 39.7 8.7 0.0003 38.9 1.1 15 921-935 27-41 (250)
238 3u3z_A Microcephalin; DNA repa 39.0 8.7 0.0003 39.4 1.0 49 1140-1193 116-164 (199)
239 3r4c_A Hydrolase, haloacid deh 37.6 9.8 0.00033 38.5 1.1 57 1144-1202 173-245 (268)
240 4fe3_A Cytosolic 5'-nucleotida 37.4 20 0.00069 37.6 3.5 40 972-1011 139-179 (297)
241 2nyv_A Pgpase, PGP, phosphogly 37.2 11 0.00039 37.1 1.4 15 921-935 4-18 (222)
242 2gfh_A Haloacid dehalogenase-l 36.5 11 0.00038 38.6 1.3 19 917-935 15-33 (260)
243 1qq5_A Protein (L-2-haloacid d 35.7 11 0.00038 37.7 1.1 15 921-935 3-17 (253)
244 4gxt_A A conserved functionall 34.4 31 0.0011 38.8 4.5 51 972-1022 219-275 (385)
245 3k1z_A Haloacid dehalogenase-l 32.8 15 0.0005 37.3 1.5 15 921-935 2-16 (263)
246 4g9b_A Beta-PGM, beta-phosphog 31.4 14 0.00049 37.2 1.1 15 921-935 6-20 (243)
247 1y8a_A Hypothetical protein AF 31.3 14 0.00049 39.5 1.1 14 921-934 22-35 (332)
248 2yj3_A Copper-transporting ATP 37.1 10 0.00035 39.4 0.0 73 972-1060 134-208 (263)
249 2fea_A 2-hydroxy-3-keto-5-meth 30.7 18 0.00061 36.2 1.7 15 920-934 6-20 (236)
250 1rku_A Homoserine kinase; phos 29.4 19 0.00063 34.7 1.5 13 921-933 3-15 (206)
251 4ap9_A Phosphoserine phosphata 27.5 9.2 0.00031 35.9 -1.0 16 920-935 9-24 (201)
252 1yns_A E-1 enzyme; hydrolase f 25.9 19 0.00065 37.2 0.9 16 920-935 10-25 (261)
253 2g80_A Protein UTR4; YEL038W, 23.4 24 0.00082 36.9 1.1 13 922-934 33-45 (253)
254 3ipz_A Monothiol glutaredoxin- 21.9 51 0.0017 30.2 2.9 43 976-1018 4-51 (109)
255 3a1c_A Probable copper-exporti 20.9 35 0.0012 35.6 1.7 15 921-935 33-47 (287)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-55 Score=499.65 Aligned_cols=287 Identities=33% Similarity=0.535 Sum_probs=233.9
Q ss_pred HhHHHHhhHHH--HHhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCC------cceeeeec-----
Q 000959 901 IQKERTRRLEE--QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP------HRHLFRFP----- 967 (1208)
Q Consensus 901 I~ke~arrLe~--q~rLLs~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P------~~~lFrlp----- 967 (1208)
++.++|.++.. +++|+..+||+||||||||||||+. +|...+|... ...| +...|.++
T Consensus 5 vs~~~a~~~~~~~~~rll~~~Kl~LVLDLDeTLiHs~~----~~~~~~~~~~-----~~~~~~~~~~dv~~F~l~~~~~~ 75 (442)
T 3ef1_A 5 VSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATV----DPTVGEWMSD-----PGNVNYDVLRDVRSFNLQEGPSG 75 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEECCBTTTEEEEC----CTHHHHHHTC-----TTSTTTGGGTTCEEEEEEETTTT
T ss_pred ecHHHHHHHHHHHHHHHHhcCCeEEEEeeccceecccc----ccccchhccC-----CCCcchhhhccccceeeeeccCC
Confidence 45566766655 5789999999999999999999984 4554555321 1111 12346654
Q ss_pred -cceEEEEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCc
Q 000959 968 -HMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046 (1208)
Q Consensus 968 -~~~~yVKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrV 1046 (1208)
...|||++|||+++||++|+++|||+|||++.+.||++|+++|||++.||.+|||+|++|+. .|+|||++|
T Consensus 76 ~~~~~~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~--------~~~KdL~~l 147 (442)
T 3ef1_A 76 YTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRL 147 (442)
T ss_dssp EEEEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC--------SSCCCGGGT
T ss_pred ceeEEEEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC--------ceeeehHHh
Confidence 35799999999999999999999999999999999999999999999999999999998742 478999988
Q ss_pred cCCC-CcEEEEcCCCcccccCCCCeEEeccccccCccc---------cc-----cCC-C--CCCcc--------------
Q 000959 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSR---------RQ-----FGL-L--GPSLL-------------- 1094 (1208)
Q Consensus 1047 LGrD-srVVIIDDrpdVW~~qpdNlI~IkpY~YF~~s~---------rQ-----fGl-p--gPSLl-------------- 1094 (1208)
|||+ ++||||||++.+|..|+ |+|+|+||+||.+.. ++ +++ + .|+..
T Consensus 148 l~rdl~~vvIIDd~p~~~~~~p-N~I~I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (442)
T 3ef1_A 148 FPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEET 226 (442)
T ss_dssp CSSCCTTEEEEESCSGGGTTCT-TEEECCCCCCSTTCCCSCC--------------------------------------
T ss_pred cCCCcceEEEEECCHHHhCCCC-CEEEcCCccccCCCCcccccccccccccccccccccccccccccccccccccccccC
Confidence 9998 99999999999999996 999999999998742 12 233 1 11100
Q ss_pred ---------------------------------------------c--------------ccccC----------Cccch
Q 000959 1095 ---------------------------------------------E--------------IDHDE----------RSEDG 1105 (1208)
Q Consensus 1095 ---------------------------------------------E--------------id~DE----------dpeDg 1105 (1208)
| .+.|| ...|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~ 306 (442)
T 3ef1_A 227 PEYDSSNSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDH 306 (442)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCC
T ss_pred cccccccccccccccccchhhhhccccCccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcH
Confidence 0 00011 13588
Q ss_pred hhhHHHHHHHHHHHhhhcCCC--------CCCCCHHHHHHHHHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCE
Q 000959 1106 TLASSLGVIERLHKIFFSHQS--------LDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAV 1177 (1208)
Q Consensus 1106 ~L~sLL~~LerIHq~FF~~~d--------L~~~DVR~ILreiRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAt 1177 (1208)
+|..++.+|.+||++||+.++ ...+||+.||+++|+++|.||+|+|||++|.+. +++.+.+|++|+.|||+
T Consensus 307 ~L~~l~~~L~~iH~~fy~~~d~~~~~~~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~-~~~r~~l~~~~~~lGa~ 385 (442)
T 3ef1_A 307 ELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGAE 385 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSCCSSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTS-CSTTSHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCC-CccHHHHHHHHHHcCCE
Confidence 999999999999999998653 235799999999999999999999999999874 46778999999999999
Q ss_pred EecccCCCccEEEeCCCCcHHHHHHHHhc
Q 000959 1178 CTKHIDDQVTHVVANSLGTDKVLLVVFSL 1206 (1208)
Q Consensus 1178 ct~sId~~VTHVVAa~~GTeKVr~A~~~g 1206 (1208)
|+.+++.+||||||...+|.|+++|++.|
T Consensus 386 ~~~~vs~~vTHLVa~~~~t~K~~~A~~~g 414 (442)
T 3ef1_A 386 VVLDFSVPPTHLIAAKIRTEKVKKAVSMG 414 (442)
T ss_dssp ECSSSSSCCSEEEECSCCCHHHHHHHHHS
T ss_pred EeCCCCCCceEEEeCCCCCHHHHHHHhcC
Confidence 99999999999999999999999999974
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-53 Score=473.14 Aligned_cols=283 Identities=33% Similarity=0.541 Sum_probs=228.8
Q ss_pred HHHhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhcccccc-CCCcceeeeec------cceEEEEeccCHHHHH
Q 000959 911 EQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDR-EKPHRHLFRFP------HMGMWTKLRPGIWTFL 983 (1208)
Q Consensus 911 ~q~rLLs~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~-~~P~~~lFrlp------~~~~yVKLRPGLdEFL 983 (1208)
.++||+..+|++||||||||||||+. +|...+|......... ..-....|.++ .+.+||++|||+++||
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~----~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL 84 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATV----DPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFL 84 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEEC----CTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccC----cCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHH
Confidence 45678999999999999999999974 4544444321000000 00012235543 3578999999999999
Q ss_pred HHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCcc
Q 000959 984 ERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 1062 (1208)
Q Consensus 984 eeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdV 1062 (1208)
++|+++|||+|||++.+.||++|++.|||.+.||.+|||+|++|+. .|+|||++++|++ ++||||||++.+
T Consensus 85 ~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~--------~~~KdL~~L~~~dl~~viiiDd~~~~ 156 (372)
T 3ef0_A 85 QKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRLFPCDTSMVVVIDDRGDV 156 (372)
T ss_dssp HHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC--------SSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred HHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC--------cceecHHHhcCCCCceEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999988742 4789999888998 999999999999
Q ss_pred cccCCCCeEEeccccccCccccccC--CCCC--Cccc------------------------ccccC----------Cccc
Q 000959 1063 WPHNKLNLIVVERYTYFPCSRRQFG--LLGP--SLLE------------------------IDHDE----------RSED 1104 (1208)
Q Consensus 1063 W~~qpdNlI~IkpY~YF~~s~rQfG--lpgP--SLlE------------------------id~DE----------dpeD 1104 (1208)
|..|+ |+|+|+||+||++.+..+. +|.. ++.+ .+.|| ...|
T Consensus 157 ~~~~p-N~I~i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D 235 (372)
T 3ef0_A 157 WDWNP-NLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRD 235 (372)
T ss_dssp GTTCT-TEEECCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCC
T ss_pred cCCCC-cEeeeCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCCh
Confidence 99996 9999999999997643221 2221 1111 11122 2358
Q ss_pred hhhhHHHHHHHHHHHhhhcCC--------CCCCCCHHHHHHHHHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCC
Q 000959 1105 GTLASSLGVIERLHKIFFSHQ--------SLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 1176 (1208)
Q Consensus 1105 g~L~sLL~~LerIHq~FF~~~--------dL~~~DVR~ILreiRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGA 1176 (1208)
++|..++++|++||++||+.+ ....+||+.||.++|+++|+||+|+|||++|.+. .++...+|++|+++||
T Consensus 236 ~~L~~~~~~L~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~-~~~~~~l~~l~~~lGa 314 (372)
T 3ef0_A 236 HELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGA 314 (372)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTS-CTTTSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCc-chhHHHHHHHHHHcCC
Confidence 999999999999999999873 3346899999999999999999999999999764 4677899999999999
Q ss_pred EEecccCCCccEEEeCCCCcHHHHHHHHh-cC
Q 000959 1177 VCTKHIDDQVTHVVANSLGTDKVLLVVFS-LL 1207 (1208)
Q Consensus 1177 tct~sId~~VTHVVAa~~GTeKVr~A~~~-gi 1207 (1208)
+|+.+++.+||||||...+|.|+++|++. ||
T Consensus 315 ~v~~~vs~~vTHLVa~~~~t~K~~~A~~~~~I 346 (372)
T 3ef0_A 315 EVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNI 346 (372)
T ss_dssp EEESSSSSCCSEEEECSCCCHHHHHHHHSSSC
T ss_pred EEeCcCCCCceEEEEcCCCchHHHHHHhcCCC
Confidence 99999999999999999999999999987 55
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=3.6e-33 Score=288.63 Aligned_cols=159 Identities=28% Similarity=0.357 Sum_probs=136.1
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcccEEEEEc
Q 000959 917 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYT 996 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSklYEIVIYT 996 (1208)
..+|+||||||||||||+... + ..++||++|||+++||++|+++|||+|||
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~----~-------------------------~~~~~v~~RPgl~eFL~~l~~~yeivI~T 81 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWS----Q-------------------------KHGWRTAKRPGADYFLGYLSQYYEIVLFS 81 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEE----T-------------------------TTEEEEEECTTHHHHHHHHTTTEEEEEEC
T ss_pred cCCCeEEEEeccccEEeeecc----c-------------------------cCceeEEeCCCHHHHHHHHHhCCEEEEEc
Confidence 478999999999999999741 1 13578999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCcccccCCCCeEEecc
Q 000959 997 MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVER 1075 (1208)
Q Consensus 997 AGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdVW~~qpdNlI~Ikp 1075 (1208)
++.+.||++|++.|||.+.+|.+|++ |++|. ...| .|+|||+ .+|++ ++||||||++.+|..|++|+|+|.+
T Consensus 82 as~~~ya~~vl~~LDp~~~~f~~rl~-R~~c~-~~~g----~y~KdL~-~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~ 154 (204)
T 3qle_A 82 SNYMMYSDKIAEKLDPIHAFVSYNLF-KEHCV-YKDG----VHIKDLS-KLNRDLSKVIIIDTDPNSYKLQPENAIPMEP 154 (204)
T ss_dssp SSCHHHHHHHHHHTSTTCSSEEEEEC-GGGSE-EETT----EEECCGG-GSCSCGGGEEEEESCTTTTTTCGGGEEECCC
T ss_pred CCcHHHHHHHHHHhCCCCCeEEEEEE-eccee-EECC----eeeecHH-HhCCChHHEEEEECCHHHHhhCccCceEeee
Confidence 99999999999999999889999876 77664 3344 6899999 57998 9999999999999999999999999
Q ss_pred ccccCccccccCCCCCCcccccccCCccchhhhHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHH
Q 000959 1076 YTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQR 1141 (1208)
Q Consensus 1076 Y~YF~~s~rQfGlpgPSLlEid~DEdpeDg~L~sLL~~LerIHq~FF~~~dL~~~DVR~ILreiRr 1141 (1208)
|.. ..|.+|..++++|+.|+.. ...|||++|+..+.
T Consensus 155 ~~~-----------------------~~D~eL~~L~~~L~~L~~~-------~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 155 WNG-----------------------EADDKLVRLIPFLEYLATQ-------QTKDVRPILNSFED 190 (204)
T ss_dssp CCS-----------------------SCCCHHHHHHHHHHHHHHT-------CCSCSHHHHTTSSC
T ss_pred ECC-----------------------CCChhHHHHHHHHHHHhhc-------ChHHHHHHHHHhcC
Confidence 951 2356899999999999842 26799999987653
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.97 E-value=1.5e-30 Score=261.11 Aligned_cols=166 Identities=29% Similarity=0.372 Sum_probs=136.3
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeec--cceEEEEeccCHHHHHHHhhcccEEEE
Q 000959 917 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFP--HMGMWTKLRPGIWTFLERASKLFEMHL 994 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp--~~~~yVKLRPGLdEFLeeLSklYEIVI 994 (1208)
..+|++||||||||||||.......+ +. ...+.+. ...+|+++|||+++||++++++|||+|
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~--d~--------------~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I 75 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNA--DF--------------IIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 75 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSC--SE--------------EEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEE
T ss_pred cCCCeEEEECCCCCeECCcccCCCCc--cc--------------eeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEE
Confidence 46899999999999999975221000 00 0111122 245789999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCcccccCCCCeEEe
Q 000959 995 YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVV 1073 (1208)
Q Consensus 995 YTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdVW~~qpdNlI~I 1073 (1208)
||++.+.||+.|++.|||.+ +|.+|++ |++|.. .+| .+.|+|+ .+|++ +++|||||++..|..++.|+|+|
T Consensus 76 ~T~~~~~~a~~vl~~ld~~~-~f~~~~~-rd~~~~-~k~----~~~k~L~-~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 76 FTASLAKYADPVADLLDKWG-AFRARLF-RESCVF-HRG----NYVKDLS-RLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ECSSCHHHHHHHHHHHCTTC-CEEEEEC-GGGSEE-ETT----EEECCGG-GTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred EcCCCHHHHHHHHHHHCCCC-cEEEEEe-ccCcee-cCC----cEeccHH-HhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 99999999999999999998 8998766 776642 233 6899998 57998 89999999999999999999999
Q ss_pred ccccccCccccccCCCCCCcccccccCCccchhhhHHHHHHHHHHHhhhcCCCCCCCCHHHHHH
Q 000959 1074 ERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILA 1137 (1208)
Q Consensus 1074 kpY~YF~~s~rQfGlpgPSLlEid~DEdpeDg~L~sLL~~LerIHq~FF~~~dL~~~DVR~ILr 1137 (1208)
.+|.. ++.|.+|..++++|+.|+. ..|||++|+
T Consensus 148 ~~~~~----------------------~~~D~eL~~l~~~L~~l~~---------~~DVr~~l~ 180 (181)
T 2ght_A 148 ASWFD----------------------NMSDTELHDLLPFFEQLSR---------VDDVYSVLR 180 (181)
T ss_dssp CCCSS----------------------CTTCCHHHHHHHHHHHHTT---------CSCTHHHHC
T ss_pred ccccC----------------------CCChHHHHHHHHHHHHhCc---------CccHHHHhh
Confidence 99962 4678899999999999985 689999986
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.95 E-value=1.4e-29 Score=276.87 Aligned_cols=163 Identities=17% Similarity=0.192 Sum_probs=133.6
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcccEEEEEc
Q 000959 917 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYT 996 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSklYEIVIYT 996 (1208)
..+|+||||||||||||+.. +. .++|+++|||+++||++|+++|||+|||
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~-----~~-------------------------~~~~~~~RP~l~eFL~~l~~~yeivIfT 186 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRS-----PA-------------------------ETGTELMRPYLHEFLTSAYEDYDIVIWS 186 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSS-----CC-------------------------SSHHHHBCTTHHHHHHHHHHHEEEEEEC
T ss_pred cCCCcEEEEeccccEEcccc-----cC-------------------------CCcceEeCCCHHHHHHHHHhCCEEEEEc
Confidence 56899999999999999963 10 1246889999999999999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCce-eeeeEEecCCCCCCCC--CC-CCCCccccCCCcc----CCC-CcEEEEcCCCcccccCC
Q 000959 997 MGNKLYATEMAKVLDPKGVL-FAGRVISRGDDGDPFD--GD-ERVPKSKDLEGVL----GME-SAVVIIDDSVRVWPHNK 1067 (1208)
Q Consensus 997 AGtreYAd~VLdiLDP~gkL-Fs~RIiSRDDc~~~fd--G~-er~~yvKDLsrVL----GrD-srVVIIDDrpdVW~~qp 1067 (1208)
++.+.||++|++.|||.+.+ |.+|+| |++|+. +. +. ....|+|||++++ |++ ++||||||++.+|..|+
T Consensus 187 as~~~ya~~vld~Ld~~~~~~~~~~~~-r~~~~~-~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p 264 (320)
T 3shq_A 187 ATSMRWIEEKMRLLGVASNDNYKVMFY-LDSTAM-ISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNP 264 (320)
T ss_dssp SSCHHHHHHHHHHTTCTTCSSCCCCEE-ECGGGC-EEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSG
T ss_pred CCcHHHHHHHHHHhCCCCCcceeEEEE-EcCCcc-ccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCc
Confidence 99999999999999999876 888888 565542 21 00 1114899999553 888 99999999999999999
Q ss_pred CCeEEeccccccCccccccCCCCCCcccccccCCccchhhhHHHHHHHHHH-HhhhcCCCCCCCCHHHHHHH
Q 000959 1068 LNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLH-KIFFSHQSLDDVDVRNILAA 1138 (1208)
Q Consensus 1068 dNlI~IkpY~YF~~s~rQfGlpgPSLlEid~DEdpeDg~L~sLL~~LerIH-q~FF~~~dL~~~DVR~ILre 1138 (1208)
+|+|+|.+|.+... +++.|.+|..++++|+.|+ . ..|||++++.
T Consensus 265 ~NgI~I~~~~~~~~------------------~~~~D~eL~~L~~~L~~L~~~---------~~DVr~~~~~ 309 (320)
T 3shq_A 265 KSGLKIRPFRQAHL------------------NRGTDTELLKLSDYLRKIAHH---------CPDFNSLNHR 309 (320)
T ss_dssp GGEEECCCCCCHHH------------------HTTTCCHHHHHHHHHHHHHHH---------CSCGGGCCGG
T ss_pred CceEEeCeEcCCCC------------------CCCccHHHHHHHHHHHHHhcc---------CcchhHHHHH
Confidence 99999999964210 1367899999999999999 5 6799998863
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.94 E-value=3.5e-27 Score=240.41 Aligned_cols=157 Identities=31% Similarity=0.386 Sum_probs=128.1
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeec--cceEEEEeccCHHHHHHHhhcccEEEE
Q 000959 917 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFP--HMGMWTKLRPGIWTFLERASKLFEMHL 994 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp--~~~~yVKLRPGLdEFLeeLSklYEIVI 994 (1208)
..+|++||||||||||||....... .+.+ ..+.+. ...+|+++|||+++||++|+++|+|+|
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~--~d~~--------------~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I 88 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISN--ADFI--------------VPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVL 88 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTT--CSEE--------------EEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEE
T ss_pred cCCCeEEEEccccceEcccccCCCC--ccce--------------eeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEE
Confidence 4689999999999999997522100 0000 011111 245889999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCcccccCCCCeEEe
Q 000959 995 YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVV 1073 (1208)
Q Consensus 995 YTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdVW~~qpdNlI~I 1073 (1208)
||++.+.||+.|++.|||.+ +|..|++ |++|.. .++ .|.|+|+ .+|++ +++|||||++..|..++.|+|+|
T Consensus 89 ~Tss~~~~a~~vl~~ld~~~-~f~~~l~-rd~~~~-~k~----~~lK~L~-~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 89 FTASLAKYADPVADLLDRWG-VFRARLF-RESCVF-HRG----NYVKDLS-RLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ECSSCHHHHHHHHHHHCCSS-CEEEEEC-GGGCEE-ETT----EEECCGG-GSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred EcCCCHHHHHHHHHHhCCcc-cEEEEEE-ccccee-cCC----ceeeeHh-HhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 99999999999999999997 8998765 776642 232 6899998 57998 89999999999999999999999
Q ss_pred ccccccCccccccCCCCCCcccccccCCccchhhhHHHHHHHHHHH
Q 000959 1074 ERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHK 1119 (1208)
Q Consensus 1074 kpY~YF~~s~rQfGlpgPSLlEid~DEdpeDg~L~sLL~~LerIHq 1119 (1208)
.+|.. ++.|.+|..++++|+.|+.
T Consensus 161 ~~~~~----------------------~~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 161 QSWFD----------------------DMTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp CCCSS----------------------CTTCCHHHHHHHHHHHHHC
T ss_pred eeecC----------------------CCChHHHHHHHHHHHHHHh
Confidence 99962 4678999999999999985
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=98.71 E-value=1.2e-08 Score=94.78 Aligned_cols=64 Identities=20% Similarity=0.144 Sum_probs=54.8
Q ss_pred HHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEe---CCCCcHHHHHHHHhcC
Q 000959 1139 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVA---NSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1139 iRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVA---a~~GTeKVr~A~~~gi 1207 (1208)
...++|.||+|+|||.++. .+..++++++.+||+|..+++.+|||||| ...++.|+++|++.|+
T Consensus 11 ~~~~~l~g~~i~isg~~~~-----~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi 77 (107)
T 3l3e_A 11 EAPKPLHKVVVCVSKKLSK-----KQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGV 77 (107)
T ss_dssp ---CTTTTCEEEECGGGGG-----GHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTC
T ss_pred cccCCCCCeEEEEeCCChH-----hHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCC
Confidence 3567999999999999872 35789999999999999999999999999 4566899999999886
No 8
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=4e-08 Score=94.52 Aligned_cols=63 Identities=25% Similarity=0.182 Sum_probs=56.5
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
..++|.||+|+|||++. +.+..|+++++.+||+|+.+++.+||||||....+.|+.+|++.||
T Consensus 19 ~~~~f~g~~i~itG~~~-----~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi 81 (129)
T 2d8m_A 19 LGKILQGVVVVLSGFQN-----PFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGG 81 (129)
T ss_dssp HTTTSTTEEEEEESCCT-----THHHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTC
T ss_pred ccccCCCeEEEEeCCCc-----HHHHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCC
Confidence 35689999999999873 2457899999999999999999999999999999999999998876
No 9
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=98.22 E-value=7.2e-08 Score=92.21 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1133 RNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1133 R~ILreiRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
|+-+.+.|-.+|.||+|+|||+-. .++..++++++++||+|+.+++++|||||+......|+..|++.+|
T Consensus 11 ~~~~~~~~~p~F~g~~Ic~sGf~~-----~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~~K~~~A~~~~i 80 (112)
T 3l46_A 11 RENLYFQGVPPFQDCILSFLGFSD-----EEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKL 80 (112)
T ss_dssp -------CCCTTTTCEECEESCCH-----HHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTBSSCSSCCCSSC
T ss_pred cccccccCCCccCCeEEEEeCCCH-----HHHHHHHHHHHHcCCEECcccCCCceEEEecCCchhhHHHHHHCCe
Confidence 455666778899999999999532 1356899999999999999999999999999988888877766654
No 10
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=98.14 E-value=2e-06 Score=81.51 Aligned_cols=68 Identities=16% Similarity=0.017 Sum_probs=55.7
Q ss_pred HHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1139 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1139 iRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
++..+|+||+++|...-..+.. .....++.+++++||+|+.+++..|||||+...++.|+++|++.+|
T Consensus 3 ~~~p~f~g~vvyvd~~~~~g~~-~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i 70 (107)
T 3pa6_A 3 MAAPILKDVVAYVEVWSSNGTE-NYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGV 70 (107)
T ss_dssp -CCCTTTTCEEEEEEBCTTSCC-BCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTC
T ss_pred ccccccCCEEEEEeccCCCChh-hHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCC
Confidence 5567999999999876433321 1235789999999999999999999999999988899999998775
No 11
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.11 E-value=2.1e-07 Score=87.52 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=53.7
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
|-.+|.||+|+|||+-. .++..++++++.+||+|+..++++|||||+....+.|+++|++.++
T Consensus 9 ~~~~F~g~~i~~sg~~~-----~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~~~K~~~a~~~~i 71 (109)
T 2cou_A 9 KVPPFQDCILSFLGFSD-----EEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVKDLPFEPSKKL 71 (109)
T ss_dssp CCCTTTTCBEEEESSCH-----HHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCSSCSSCCCTTS
T ss_pred cCCcCCCeEEEecCCCH-----HHHHHHHHHHHHcCCEEecccCCCccEEEEeCCccHHHHHHHHCCC
Confidence 45689999999999432 2356899999999999999999999999999988888888877664
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=98.07 E-value=3.2e-06 Score=75.15 Aligned_cols=58 Identities=24% Similarity=0.297 Sum_probs=47.9
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccC--CCccEEEeCCCCcHHHHHH
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID--DQVTHVVANSLGTDKVLLV 1202 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId--~~VTHVVAa~~GTeKVr~A 1202 (1208)
...+|+||+|+|+|+.. +....++++++.+||+|+..++ .+||||||......|+..+
T Consensus 4 ~~~~f~g~~~~i~g~~~-----~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~~~K~~~~ 63 (92)
T 4id3_A 4 SSKIFKNCVIYINGYTK-----PGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEF 63 (92)
T ss_dssp --CTTTTCEEEECSCCS-----SCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHT
T ss_pred cccccCCEEEEEeCCCC-----cCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCCHHHHHHc
Confidence 35789999999999531 3356799999999999999999 8999999999888886554
No 13
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=97.87 E-value=5.7e-06 Score=89.90 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=57.7
Q ss_pred HHHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccC-CCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1138 AEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1138 eiRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId-~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
..+..+|.||.|+|||+.+. +...++++++.+||+++.+++ .+||||||....+.|+..|++.||
T Consensus 194 ~~~~~~f~g~~i~~tG~~~~-----~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~g~K~~~A~~~gi 259 (298)
T 3olc_X 194 DFKCPIFLGCIICVTGLCGL-----DRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNV 259 (298)
T ss_dssp GGBCCTTTTCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSCSHHHHHHHHTTC
T ss_pred cccccccCCeEEEEeCCCCc-----cHHHHHHHHHHcCCEEeceecCCCceEEEEeCCCchHHHHHHHCCC
Confidence 44678999999999997653 356899999999999999999 799999999999999999998876
No 14
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=97.86 E-value=9.5e-06 Score=82.97 Aligned_cols=63 Identities=21% Similarity=0.195 Sum_probs=53.4
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCC------CcHHHHHHHHhcC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~------GTeKVr~A~~~gi 1207 (1208)
++..++++.|+|||+.+. +...+.++++.+||.++.++++.||||||... .|.|+.+|+..|+
T Consensus 1 ~~~~~~~~~i~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~ 69 (229)
T 1l0b_A 1 KERAERDISMVVSGLTPK-----EVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGK 69 (229)
T ss_dssp --CCCCCCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTC
T ss_pred CCCCCCCeEEEEcCCCHH-----HHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCC
Confidence 356789999999998653 23568899999999999999999999999974 7999999999885
No 15
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=97.85 E-value=1.1e-05 Score=87.78 Aligned_cols=61 Identities=15% Similarity=0.238 Sum_probs=55.7
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi 1207 (1208)
.+|+||.|+|||+.|. ....+.++++.+||+++.+++.+||||||...+|.|+++|.+.|+
T Consensus 104 ~~l~g~~~~~tG~~~~-----~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~~t~Ky~~A~~~gi 164 (298)
T 3olc_X 104 MVMSDVTISCTSLEKE-----KREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKK 164 (298)
T ss_dssp CTTTTCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTC
T ss_pred cccCCeEEEeCCCcHH-----hHHHHHHHHHHCCCEEecCcCCCeeEEEEeCCCChHHHHHHHCCC
Confidence 4899999999998763 256789999999999999999999999999999999999999886
No 16
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=97.78 E-value=1.2e-05 Score=74.51 Aligned_cols=62 Identities=13% Similarity=0.088 Sum_probs=55.2
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcCC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLLS 1208 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi~ 1208 (1208)
..|.|..|||+|.++. .+..++.+++.+||.|+.+|+.+||||||......|+..|.+.||.
T Consensus 6 ~~l~G~~~v~TG~l~~-----~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~ 67 (92)
T 1l7b_A 6 EALKGLTFVITGELSR-----PREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVP 67 (92)
T ss_dssp CSSTTCEEECSTTTTS-----CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSC
T ss_pred CCcCCcEEEEecCCCC-----CHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCc
Confidence 4589999999998864 2467889999999999999999999999998777999999999873
No 17
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=97.78 E-value=2.5e-05 Score=74.01 Aligned_cols=60 Identities=12% Similarity=0.167 Sum_probs=52.7
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHh
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFS 1205 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~ 1205 (1208)
.+|.||++.|+|.+|. .+...++++..+||+.|....+++|||+|+.+..+.|+..|++.
T Consensus 6 d~F~g~~f~l~~~~p~----~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~~d~~~~~a~~~ 65 (104)
T 3pc6_A 6 DFFEGKHFFLYGEFPG----DERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALME 65 (104)
T ss_dssp CTTTTCEEEEESCCST----THHHHHHHHHHHTTCEECSSCCTTCCEEEESSCCCHHHHHHHTT
T ss_pred hhhCCeEEEEcCCCcH----HHHHHHHHHHHHcCCEEEcccCCCceEEEeCCCCChhHHHHhhh
Confidence 3789999999999873 24567999999999999999999999999999999999988753
No 18
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=97.76 E-value=5.2e-06 Score=80.20 Aligned_cols=63 Identities=22% Similarity=0.338 Sum_probs=49.5
Q ss_pred HHHHHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHH
Q 000959 1136 LAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVF 1204 (1208)
Q Consensus 1136 LreiRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~ 1204 (1208)
+.+.+..+|+||+|+|+|+- ....+.|+++++.+||+|+..+++.|||||+.+. +.+++.+.+
T Consensus 33 ~~~~~~~lF~g~~i~i~G~~-----~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~-~~~~~~~~~ 95 (132)
T 1wf6_A 33 AFQAPEDLLDGCRIYLCGFS-----GRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDY-DDELKQFWN 95 (132)
T ss_dssp GCCCCTTTTTTCEEEEESCC-----SHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSC-CSHHHHHHH
T ss_pred cccccccccCCEEEEEECCC-----hHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCc-hHHHHHHHH
Confidence 34455689999999999862 1235678999999999999999999999999874 555655543
No 19
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=97.75 E-value=2e-05 Score=71.38 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=49.1
Q ss_pred HhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccC-CCccEEEeCCCCcHHHHHHH
Q 000959 1141 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVLLVV 1203 (1208)
Q Consensus 1141 rkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId-~~VTHVVAa~~GTeKVr~A~ 1203 (1208)
..+|+||.|+++|+- .+....|+++++.+||++..+++ ..+||+||.+..+.|++.++
T Consensus 10 ~~lF~g~~~~isg~~-----~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~~~k~~~~~ 68 (97)
T 2ebw_A 10 STIFSGVAIYVNGYT-----DPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK 68 (97)
T ss_dssp CCTTTTCEEEECSSC-----SSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCCTTHHHHTS
T ss_pred CCCCCCeEEEEeCCC-----cccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCChHHHHHhc
Confidence 368999999999862 23467899999999999998877 68999999999888987764
No 20
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=97.71 E-value=5.7e-05 Score=72.01 Aligned_cols=62 Identities=16% Similarity=0.106 Sum_probs=54.1
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCC-CcHHHHHHHHhcC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~-GTeKVr~A~~~gi 1207 (1208)
..|.|..|||+|.++.. .+..++.+++.+||.|+..|+.+|+|||+... |+.|+..|.+.||
T Consensus 31 ~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI 93 (109)
T 2k6g_A 31 NCLEGLIFVITGVLESI----ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGT 93 (109)
T ss_dssp TTTTTCEEEEESBCSSC----CHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTC
T ss_pred CCCCCCEEEEeeeCCCC----CHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCC
Confidence 46999999999998642 24578899999999999999999999999874 5599999999987
No 21
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.64 E-value=6.5e-05 Score=72.18 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=54.2
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCC-CCcHHHHHHHHhcC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~-~GTeKVr~A~~~gi 1207 (1208)
..|.|.+|||+|.++.. .+..++.+++.+||.|+..|+.+|+|||+.. .|+.|+.+|.+.||
T Consensus 21 ~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI 83 (112)
T 2ebu_A 21 NCLEGLIFVITGVLESI----ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGT 83 (112)
T ss_dssp SSSTTCEEEECSCCSSS----CHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTC
T ss_pred CCcCCCEEEEeeeCCCC----CHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCC
Confidence 46999999999998642 2467889999999999999999999999987 46699999999987
No 22
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=97.59 E-value=4.6e-05 Score=76.67 Aligned_cols=58 Identities=22% Similarity=0.198 Sum_probs=49.5
Q ss_pred cCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCC------CcHHHHHHHHhcC
Q 000959 1145 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1145 ~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~------GTeKVr~A~~~gi 1207 (1208)
+|+.|+|||+.+. +...+.++++.|||+++.++++.||||||... .|.|+..|+..|+
T Consensus 3 ~~~~~~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~ 66 (214)
T 1t15_A 3 KRMSMVVSGLTPE-----EFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGK 66 (214)
T ss_dssp -CCEEEEESCCHH-----HHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTC
T ss_pred CcEEEEECCCCHH-----HHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCC
Confidence 6899999997543 24568899999999999999999999999974 5999999998875
No 23
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=97.48 E-value=0.00012 Score=75.22 Aligned_cols=60 Identities=13% Similarity=0.120 Sum_probs=46.0
Q ss_pred HHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCC-CCcHHHHHHHHhcC
Q 000959 1139 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1139 iRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~-~GTeKVr~A~~~gi 1207 (1208)
-+++.+.+++|+|||+.+. .+.++++.+||.++.+++ +||||||.+ ..|.|+..|+..|+
T Consensus 5 ~~~~~~~~~~v~~sG~~~~--------~~~~~i~~lGg~~~~~~~-~~THlI~~~~~rt~K~l~a~~~g~ 65 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVDA--------RGERAVLALGGSLAGSAA-EASHLVTDRIRRTVKFLCALGRGI 65 (209)
T ss_dssp -------CCEEEECSSCCH--------HHHHHHHHTTCEECSSTT-TCSEEECSSCCCSHHHHHHHHHTC
T ss_pred cccccCCCcEEEEeCCCcH--------HHHHHHHHCCCEEeCCCC-CceEEEECCCCCCHHHHHHHhcCC
Confidence 3577899999999998642 357889999999999998 499999987 46999999999886
No 24
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.31 E-value=0.00027 Score=68.58 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=59.5
Q ss_pred EEEEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceee-eeEEecCCCCCCCCCCCCCCccccCCCccC
Q 000959 971 MWTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLG 1048 (1208)
Q Consensus 971 ~yVKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs-~RIiSRDDc~~~fdG~er~~yvKDLsrVLG 1048 (1208)
..+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|. ..+++.+. . ..++. . ..++-+-..+|
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~-~-~~kp~-~-~~~~~~~~~~g 141 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDE-A-PPKPH-P-GGLLKLAEAWD 141 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTT-S-CCTTS-S-HHHHHHHHHTT
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCC-C-CCCCC-H-HHHHHHHHHcC
Confidence 3578899999999999875 9999999999999999999887554 663 34676543 1 11110 0 01222222457
Q ss_pred CC-CcEEEEcCCCc
Q 000959 1049 ME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD-srVVIIDDrpd 1061 (1208)
.+ +.+|.|+|+..
T Consensus 142 ~~~~~~i~iGD~~~ 155 (205)
T 3m9l_A 142 VSPSRMVMVGDYRF 155 (205)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCHHHEEEECCCHH
Confidence 66 78999999873
No 25
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=97.27 E-value=0.00018 Score=69.19 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=53.1
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCC---CCcHHHHHHHHhcCC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS---LGTDKVLLVVFSLLS 1208 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~---~GTeKVr~A~~~gi~ 1208 (1208)
..|.|.+|||+|-+.. .+..+..+++.+||+|+..|+.+|+|||+.. ....|..+|.+.||.
T Consensus 9 ~~l~G~~~ViTG~l~~-----~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~ 73 (113)
T 2cok_A 9 KPLSNMKILTLGKLSR-----NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIR 73 (113)
T ss_dssp CSSSSCEEEECSCCSS-----CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCC
T ss_pred CCcCCCEEEEEecCCC-----CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCc
Confidence 4699999999998743 2456788999999999999999999999994 367899999999873
No 26
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.18 E-value=0.00042 Score=67.85 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=55.4
Q ss_pred EEEeccCHHHHHHHhhcc-cEEEEEcCCc-HHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCC
Q 000959 972 WTKLRPGIWTFLERASKL-FEMHLYTMGN-KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1049 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSkl-YEIVIYTAGt-reYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGr 1049 (1208)
.+.+.|++.++|++|.+. |.++|.|++. +.++..+++.++-.. +|...++... . + ...+.+=++ .+|.
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~--~---k---~~~~~~~~~-~~~~ 135 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIYPG--S---K---ITHFERLQQ-KTGI 135 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEESSS--C---H---HHHHHHHHH-HHCC
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEEeC--c---h---HHHHHHHHH-HcCC
Confidence 367899999999999865 9999999999 899999999987665 6764322211 0 0 001111122 3566
Q ss_pred C-CcEEEEcCCCc
Q 000959 1050 E-SAVVIIDDSVR 1061 (1208)
Q Consensus 1050 D-srVVIIDDrpd 1061 (1208)
+ +.+|+|+|+..
T Consensus 136 ~~~~~~~igD~~~ 148 (187)
T 2wm8_A 136 PFSQMIFFDDERR 148 (187)
T ss_dssp CGGGEEEEESCHH
T ss_pred ChHHEEEEeCCcc
Confidence 5 78999999864
No 27
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.17 E-value=0.00017 Score=75.14 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=51.6
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCC-CCcHHHHHHHHhcC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~-~GTeKVr~A~~~gi 1207 (1208)
+-.-+.|++|+|||+-+. +...+.++++.+||.++.++ .+||||||.+ .+|.|+..|+..|+
T Consensus 10 ~~~~~~~~~i~~SG~~~~-----~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~~~rT~K~l~A~~~g~ 72 (219)
T 3sqd_A 10 KLTPELTPFVLFTGFEPV-----QVQQYIKKLYILGGEVAESA-QKCTHLIASKVTRTVKFLTAISVVK 72 (219)
T ss_dssp CCCGGGCCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSG-GGCSEEECSSCCCCHHHHHHTTTCS
T ss_pred ccCCCCCeEEEEeCCChH-----HHHHHHHHHHHCCCEEeCCC-CCceEEEECCCCCCHHHHHHHHcCC
Confidence 345689999999997553 23467889999999999997 8999999986 67999999998875
No 28
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=97.17 E-value=0.0018 Score=63.67 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=67.8
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcc-cEEEEE
Q 000959 917 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLY 995 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSkl-YEIVIY 995 (1208)
...-+++++|+|+||+..... .+.. .. .-.+.+.||+.++|++|.+. |.++|.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~--------~~~~-----------------~~-~~~~~~~pg~~e~L~~L~~~G~~l~i~ 64 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPS--------DFQV-----------------DR-FDKLAFEPGVIPQLLKLQKAGYKLVMI 64 (176)
T ss_dssp --CCEEEEECSBTTTBCCC----------CCCC-----------------CS-GGGCCBCTTHHHHHHHHHHTTEEEEEE
T ss_pred CCcCcEEEEeCCCCeEcCCCC--------CcCc-----------------CC-HHHCcCCccHHHHHHHHHHCCCEEEEE
Confidence 457789999999999976310 0000 00 00245789999999999865 999999
Q ss_pred cCC---------------cHHHHHHHHHHhcCCCceeeeeEEe----cCCCCCCCCCCCCCCccccCCCccCCC-CcEEE
Q 000959 996 TMG---------------NKLYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVVI 1055 (1208)
Q Consensus 996 TAG---------------treYAd~VLdiLDP~gkLFs~RIiS----RDDc~~~fdG~er~~yvKDLsrVLGrD-srVVI 1055 (1208)
|++ .+.++..+++.+.-. |..-+++ .+++. ..++. ...+.+=++ .+|.+ +.+|+
T Consensus 65 Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~-~~KP~-p~~~~~~~~-~~gi~~~~~l~ 138 (176)
T 2fpr_A 65 TNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECD-CRKPK-VKLVERYLA-EQAMDRANSYV 138 (176)
T ss_dssp EECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCS-SSTTS-CGGGGGGC-----CCGGGCEE
T ss_pred ECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccccc-ccCCC-HHHHHHHHH-HcCCCHHHEEE
Confidence 999 688888888887643 6653344 12221 11211 111222233 34655 78999
Q ss_pred EcCCC
Q 000959 1056 IDDSV 1060 (1208)
Q Consensus 1056 IDDrp 1060 (1208)
|+|+.
T Consensus 139 VGD~~ 143 (176)
T 2fpr_A 139 IGDRA 143 (176)
T ss_dssp EESSH
T ss_pred EcCCH
Confidence 99986
No 29
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=97.11 E-value=0.00039 Score=73.35 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=49.5
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEec--ccCCCccEEEeCCC-CcHHHHHHHHhcC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK--HIDDQVTHVVANSL-GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~--sId~~VTHVVAa~~-GTeKVr~A~~~gi 1207 (1208)
++.++.+|+|||+.+. +...++++++.||+.++. +++++||||||... .|.|+..|+..|.
T Consensus 5 ~~~~~~~~~~Sg~~~~-----~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~ 68 (235)
T 3al2_A 5 SLKKQYIFQLSSLNPQ-----ERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGK 68 (235)
T ss_dssp ---CCCEEEEESCCHH-----HHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTC
T ss_pred cCCCCEEEEEcCCCHH-----HHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCC
Confidence 4568999999997642 235689999999999986 58899999999985 5999999999885
No 30
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.03 E-value=0.00071 Score=66.51 Aligned_cols=83 Identities=13% Similarity=0.156 Sum_probs=56.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcH---HHHHHHHHHhcCCCceeeeeEEecCCCC---CCCCCCCCCCccccCCC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNK---LYATEMAKVLDPKGVLFAGRVISRGDDG---DPFDGDERVPKSKDLEG 1045 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtr---eYAd~VLdiLDP~gkLFs~RIiSRDDc~---~~fdG~er~~yvKDLsr 1045 (1208)
+.+.||+.++|++|.+. |.++|.|++.. .++..+++.+.-.. +|.. +++.++.. ...+.. +..+.+=+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~fd~-i~~~~~~~~~~~~~KP~-p~~~~~~~~- 108 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID-YFDF-IYASNSELQPGKMEKPD-KTIFDFTLN- 108 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GEEE-EEECCTTSSTTCCCTTS-HHHHHHHHH-
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh-heEE-EEEccccccccCCCCcC-HHHHHHHHH-
Confidence 56899999999999875 99999999887 89999998887654 7764 56554321 011110 000111122
Q ss_pred ccCCC-CcEEEEcCC
Q 000959 1046 VLGME-SAVVIIDDS 1059 (1208)
Q Consensus 1046 VLGrD-srVVIIDDr 1059 (1208)
.+|.+ +.+|+|+|+
T Consensus 109 ~~~~~~~~~l~VGD~ 123 (189)
T 3ib6_A 109 ALQIDKTEAVMVGNT 123 (189)
T ss_dssp HHTCCGGGEEEEESB
T ss_pred HcCCCcccEEEECCC
Confidence 34666 789999998
No 31
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=97.03 E-value=0.00027 Score=66.72 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=44.0
Q ss_pred HHHhhhcCceEEeeeeccCCCCCCCCchHHH-HHHhcCCEEecccCCCccEEEeCCCCcHHH
Q 000959 1139 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQ-TAEQFGAVCTKHIDDQVTHVVANSLGTDKV 1199 (1208)
Q Consensus 1139 iRrkVL~GC~IVFSGVfPlg~anPe~h~LWr-LAEsFGAtct~sId~~VTHVVAa~~GTeKV 1199 (1208)
....+|+||+|+| +|.+...+ ...++. +|..+||+++.++++.|||||+.+..+.|.
T Consensus 7 ~~~~~F~g~~v~~---~p~~~~~~-r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~ 64 (106)
T 2jw5_A 7 EAEEWLSSLRAHV---VRTGIGRA-RAELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYER 64 (106)
T ss_dssp CGGGCGGGSCCCB---CTTTCCSS-STTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHH
T ss_pred cCcCEeCCeEEEE---EecCCchH-HHHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHH
Confidence 3578999999986 67765433 334554 799999999999999999999986555554
No 32
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=96.87 E-value=0.00064 Score=65.76 Aligned_cols=48 Identities=13% Similarity=0.232 Sum_probs=41.8
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeE
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRV 1021 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RI 1021 (1208)
+.++|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~ 122 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTL 122 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hcccee
Confidence 56899999999999976 9999999999999999999987654 677643
No 33
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=96.82 E-value=0.0018 Score=63.41 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=58.0
Q ss_pred EEEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 972 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
.+...|++.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|.. +++.++... .++. . ..++.+-..+|.+
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~-~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFDS-IIGSGDTGT-IKPS-P-EPVLAALTNINIE 175 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEETSSSC-CTTS-S-HHHHHHHHHHTCC
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-heee-EEcccccCC-CCCC-h-HHHHHHHHHcCCC
Confidence 367899999999999875 9999999999999999999876544 6764 555443221 1110 0 0112222235665
Q ss_pred -C-cEEEEcCCCc
Q 000959 1051 -S-AVVIIDDSVR 1061 (1208)
Q Consensus 1051 -s-rVVIIDDrpd 1061 (1208)
. .+|.|+|+..
T Consensus 176 ~~~~~v~vGD~~~ 188 (231)
T 3kzx_A 176 PSKEVFFIGDSIS 188 (231)
T ss_dssp CSTTEEEEESSHH
T ss_pred cccCEEEEcCCHH
Confidence 5 7999999974
No 34
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=96.76 E-value=0.00074 Score=64.11 Aligned_cols=84 Identities=21% Similarity=0.141 Sum_probs=57.9
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|.. +++.++... .++. . ...+.+-..+|.+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 157 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVKN-GKPD-P-EIYLLVLERLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSSS-CTTS-T-HHHHHHHHHHTCCG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hcCE-EeecccCCC-CCcC-c-HHHHHHHHHcCCCC
Confidence 67899999999999876 9999999999999999999887654 6754 554443211 1110 0 0111222235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
..++.|+|+..
T Consensus 158 ~~~i~iGD~~~ 168 (216)
T 2pib_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred ceEEEEeCcHH
Confidence 78999999963
No 35
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=96.73 E-value=0.0024 Score=61.33 Aligned_cols=106 Identities=11% Similarity=0.038 Sum_probs=63.8
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcc-cEEEEEcCCc
Q 000959 921 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMGN 999 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSkl-YEIVIYTAGt 999 (1208)
+.++||+|+||++.... ++. . + -.+.+.||+.++|++|.+. |.++|.|++.
T Consensus 2 k~v~~D~DGtL~~~~~~---------~~~-----~---~-----------~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDA---------FVK-----S---P-----------DEWIALPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CEEEECSBTTTBCCCTT---------CCC-----S---G-----------GGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CEEEEcCCCccccCCCc---------cCC-----C---H-----------HHceECcCHHHHHHHHHHCCCEEEEEECCC
Confidence 46899999999976310 000 0 0 0145689999999999875 9999999998
Q ss_pred H---------------HHHHHHHHHhcCCCceeeeeEEe----cCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCC
Q 000959 1000 K---------------LYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1059 (1208)
Q Consensus 1000 r---------------eYAd~VLdiLDP~gkLFs~RIiS----RDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDr 1059 (1208)
. .++..+++.+. .+|...++. .+++. ..+.. ...+.+=++ .+|.+ +.+|+|+|+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~-~~KP~-~~~~~~~~~-~~~~~~~~~~~vGD~ 127 (179)
T 3l8h_A 54 GLARGLFDTATLNAIHDKMHRALAQMG---GVVDAIFMCPHGPDDGCA-CRKPL-PGMYRDIAR-RYDVDLAGVPAVGDS 127 (179)
T ss_dssp TTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCCEEEEECCCTTSCCS-SSTTS-SHHHHHHHH-HHTCCCTTCEEEESS
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHhCC---CceeEEEEcCCCCCCCCC-CCCCC-HHHHHHHHH-HcCCCHHHEEEECCC
Confidence 6 66677777665 455543322 12211 11110 001111122 34666 789999998
Q ss_pred C
Q 000959 1060 V 1060 (1208)
Q Consensus 1060 p 1060 (1208)
.
T Consensus 128 ~ 128 (179)
T 3l8h_A 128 L 128 (179)
T ss_dssp H
T ss_pred H
Confidence 6
No 36
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=96.70 E-value=0.0022 Score=64.34 Aligned_cols=67 Identities=16% Similarity=0.087 Sum_probs=49.4
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEc
Q 000959 918 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 996 (1208)
Q Consensus 918 ~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYT 996 (1208)
.+...+++|+|+||+....+. ..+ -.+.+.||+.++|++|.+ -|.++|.|
T Consensus 23 ~~~k~v~~D~DGTL~~~~~~~------~~~-----------------------~~~~~~pg~~e~L~~L~~~G~~~~ivT 73 (211)
T 2gmw_A 23 KSVPAIFLDRDGTINVDHGYV------HEI-----------------------DNFEFIDGVIDAMRELKKMGFALVVVT 73 (211)
T ss_dssp -CBCEEEECSBTTTBCCCSSC------CSG-----------------------GGCCBCTTHHHHHHHHHHTTCEEEEEE
T ss_pred hcCCEEEEcCCCCeECCCCcc------cCc-----------------------ccCcCCcCHHHHHHHHHHCCCeEEEEE
Confidence 345689999999999753110 000 014467999999999986 59999999
Q ss_pred CCc---------------HHHHHHHHHHhcCC
Q 000959 997 MGN---------------KLYATEMAKVLDPK 1013 (1208)
Q Consensus 997 AGt---------------reYAd~VLdiLDP~ 1013 (1208)
++. ..++..+++.+.-.
T Consensus 74 n~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 74 NQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp ECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 999 58888888877643
No 37
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=96.61 E-value=0.00023 Score=64.35 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=53.7
Q ss_pred eccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-Cc
Q 000959 975 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 1052 (1208)
Q Consensus 975 LRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-sr 1052 (1208)
+.|++.++|++|.+. |.++|.|++...++..+++.+.-.. +|.. ++..+++.. .+.. ...+.+=++ .+|.+ +.
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~-i~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~~ 93 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VVDK-VLLSGELGV-EKPE-EAAFQAAAD-AIDLPMRD 93 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SSSE-EEEHHHHSC-CTTS-HHHHHHHHH-HTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hccE-EEEeccCCC-CCCC-HHHHHHHHH-HcCCCccc
Confidence 368999999999875 9999999999999999998875443 5654 554332211 1110 000111122 24555 78
Q ss_pred EEEEcCCCcc
Q 000959 1053 VVIIDDSVRV 1062 (1208)
Q Consensus 1053 VVIIDDrpdV 1062 (1208)
+++|+|+..-
T Consensus 94 ~~~vgD~~~d 103 (137)
T 2pr7_A 94 CVLVDDSILN 103 (137)
T ss_dssp EEEEESCHHH
T ss_pred EEEEcCCHHH
Confidence 9999998753
No 38
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=96.47 E-value=0.0013 Score=68.90 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=46.1
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCC-CcHHHHHHHHhcC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~-GTeKVr~A~~~gi 1207 (1208)
+..++.+|+|||+-+... .++++.||+.++.+++ +||||||.+. +|.|+..|+..|+
T Consensus 4 ~~~~~~~v~fSG~~~~~~--------~~~i~~lGg~v~~~~~-~~THlV~~~~~RT~K~l~Aia~g~ 61 (220)
T 3l41_A 4 KASKRVYITFTGYDKKPS--------IDNLKKLDMSITSNPS-KCTHLIAPRILRTSKFLCSIPYGP 61 (220)
T ss_dssp ---CCEEEEECSCSSCCC--------CGGGGGGTEEECSCTT-TCSEEECSSCCCBHHHHHHGGGCC
T ss_pred cccceEEEEEeccCCCCC--------cchHhhcceeeccCch-hhhhhhhhhHhhhcceeecCCCCC
Confidence 356789999999876421 5678999999999986 6999999874 7999999999885
No 39
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=96.42 E-value=0.0014 Score=63.63 Aligned_cols=83 Identities=10% Similarity=0.059 Sum_probs=56.8
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... .++. . ..++.+-..+|.+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 169 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFDH-LISVDEVRL-FKPH-Q-KVYELAMDTLHLGE 169 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTC-H-HHHHHHHHHHTCCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcce-eEehhhccc-CCCC-h-HHHHHHHHHhCCCc
Confidence 56789999999999876 9999999999999999999876543 5664 555443221 1110 0 0112222235666
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|+|+|+.
T Consensus 170 ~~~~~iGD~~ 179 (230)
T 3um9_A 170 SEILFVSCNS 179 (230)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 7899999986
No 40
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=96.01 E-value=0.0046 Score=63.51 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=46.5
Q ss_pred cCceEEeeeeccCCCCCCCCchHHHHHHhcCC-EEecccCCCccEEEeCC-CCcHHHHHHHHhcC
Q 000959 1145 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA-VCTKHIDDQVTHVVANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1145 ~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGA-tct~sId~~VTHVVAa~-~GTeKVr~A~~~gi 1207 (1208)
..-.|++||+=+. +...+.++++.||+ .|+.++++.||||||.. .+|.|+..|+..|.
T Consensus 10 ~~~~~~~sgl~~~-----~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~ 69 (199)
T 3u3z_A 10 PTRTLVMTSMPSE-----KQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGC 69 (199)
T ss_dssp CCCEEEEESCCHH-----HHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTC
T ss_pred CCeEEEEcCCCHH-----HHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCC
Confidence 4556789986321 24567889999965 88899999999999988 58999999999884
No 41
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=95.93 E-value=0.0033 Score=68.15 Aligned_cols=49 Identities=18% Similarity=0.302 Sum_probs=42.2
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEE
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1022 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIi 1022 (1208)
+.++||+.++|++|.+. |.++|.|++...++..+++.+.-.. +|...+.
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~ 227 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVE 227 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEE
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEE
Confidence 57899999999999865 9999999999999999999987654 6776543
No 42
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=95.90 E-value=0.0024 Score=76.86 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=0.0
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcCC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLLS 1208 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi~ 1208 (1208)
..|.|.+|||+|.++. . +..++.+++.+||+|+.+|+.+|++||+......|..+|.+.||.
T Consensus 586 ~~l~G~~~v~TG~l~~-~----R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~ 647 (667)
T 1dgs_A 586 DLLSGLTFVLTGELSR-P----REEVKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVA 647 (667)
T ss_dssp -------------------------------------------------------------------
T ss_pred cccCCCEEEEeCCCCC-C----HHHHHHHHHHcCCEEcCcccCCeeEEEECCCCChHHHHHHHCCCe
Confidence 4599999999999864 2 456788999999999999999999999998777999999999873
No 43
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=95.89 E-value=0.012 Score=55.77 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=66.1
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcc-cEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSkl-YEIVIYTAG 998 (1208)
...+++|||+||+++... +.+ ....+-.+.|+..++|+++.+. |.++|.|++
T Consensus 9 ~k~v~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~ 61 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLY--YTE-------------------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGR 61 (162)
T ss_dssp CCEEEECCTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESC
T ss_pred eeEEEEecCcceECCcee--ecC-------------------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCC
Confidence 456899999999976421 000 0123445689999999999865 999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCc
Q 000959 999 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 999 treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpd 1061 (1208)
...++..+++.+.-.. +|.. . .. ++ ..++.+-..++.+ +.+++|+|+..
T Consensus 62 ~~~~~~~~l~~~gl~~-~~~~-----~-kp---~~----~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 62 DSAPLITRLKELGVEE-IYTG-----S-YK---KL----EIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp CCHHHHHHHHHTTCCE-EEEC-----C------CH----HHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred CcHHHHHHHHHcCCHh-hccC-----C-CC---CH----HHHHHHHHHcCCCHHHEEEECCCHH
Confidence 9999999999886442 4432 0 00 00 1112221234555 78999999874
No 44
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=95.84 E-value=0.0018 Score=66.23 Aligned_cols=83 Identities=20% Similarity=0.164 Sum_probs=56.3
Q ss_pred EEeccCHHHHHHHhhc-cc--EEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCC-CCCCCCCCcc---ccCCC
Q 000959 973 TKLRPGIWTFLERASK-LF--EMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP-FDGDERVPKS---KDLEG 1045 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lY--EIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~-fdG~er~~yv---KDLsr 1045 (1208)
+...|++.++|+.+.+ .| .++|+|++.+.++..+++.+.-.. +|.. +++.++.... ..+ .+.. +-+-.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~-v~~~~~~~~~~~~~---Kp~~~~~~~~~~ 215 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDG-LTYCDYSRTDTLVC---KPHVKAFEKAMK 215 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSE-EECCCCSSCSSCCC---TTSHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccce-EEEeccCCCcccCC---CcCHHHHHHHHH
Confidence 6679999999999986 58 999999999999999999887654 6765 4443322110 111 1111 11112
Q ss_pred ccCCC--CcEEEEcCCC
Q 000959 1046 VLGME--SAVVIIDDSV 1060 (1208)
Q Consensus 1046 VLGrD--srVVIIDDrp 1060 (1208)
.+|.+ +.+|+|+|+.
T Consensus 216 ~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 216 ESGLARYENAYFIDDSG 232 (282)
T ss_dssp HHTCCCGGGEEEEESCH
T ss_pred HcCCCCcccEEEEcCCH
Confidence 34654 6899999987
No 45
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=95.69 E-value=0.0035 Score=75.43 Aligned_cols=63 Identities=13% Similarity=0.084 Sum_probs=0.0
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhcCC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSLLS 1208 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~gi~ 1208 (1208)
..|.|.+|||+|.++... +..++.+++.+||+|+.+|+.+|++||+......|..+|.+.||.
T Consensus 596 ~~l~G~~~v~TG~l~~~~----R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~ 658 (671)
T 2owo_A 596 SPFAGKTVVLTGSLSQMS----RDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIE 658 (671)
T ss_dssp -------------------------------------------------------------------
T ss_pred CcccCcEEEEcCCCCCCC----HHHHHHHHHHcCCEEeCcccCceeEEEECCCCChHHHHHHHCCCc
Confidence 469999999999986421 356788999999999999999999999998777999999999873
No 46
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=95.67 E-value=0.024 Score=63.74 Aligned_cols=111 Identities=15% Similarity=0.134 Sum_probs=68.6
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcc-cEEEEEc
Q 000959 918 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYT 996 (1208)
Q Consensus 918 ~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSkl-YEIVIYT 996 (1208)
.+...++||||+||+.+.... .+. ....-|..+-||+.++|+.|.+. |.|+|.|
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~--------~~~-----------------~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvT 110 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK--------VFP-----------------TSPSDWRILYPEIPKKLQELAAEGYKLVIFT 110 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS--------SSC-----------------SSTTCCEESCTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEeCCCCccccCCCc--------cCC-----------------CCHHHhhhhcccHHHHHHHHHHCCCeEEEEe
Confidence 456789999999999764210 000 00112455789999999999864 9999999
Q ss_pred CCc------------HHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccC----CC-CcEEEEcCC
Q 000959 997 MGN------------KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG----ME-SAVVIIDDS 1059 (1208)
Q Consensus 997 AGt------------reYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLG----rD-srVVIIDDr 1059 (1208)
+.. ..++..+++.+.- .|. .+++.+++. ..+.. ...+.+=+. .+| .+ ..+|+|.|+
T Consensus 111 N~~gi~~g~~~~~~~~~~~~~~l~~lgl---~fd-~i~~~~~~~-~~KP~-p~~~~~a~~-~l~~~~~v~~~~~l~VGDs 183 (416)
T 3zvl_A 111 NQMGIGRGKLPAEVFKGKVEAVLEKLGV---PFQ-VLVATHAGL-NRKPV-SGMWDHLQE-QANEGIPISVEDSVFVGDA 183 (416)
T ss_dssp ECHHHHTTSSCHHHHHHHHHHHHHHHTS---CCE-EEEECSSST-TSTTS-SHHHHHHHH-HSSTTCCCCGGGCEEECSC
T ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCC---CEE-EEEECCCCC-CCCCC-HHHHHHHHH-HhCCCCCCCHHHeEEEECC
Confidence 966 3447777777753 465 366655442 22211 001112222 244 45 789999998
Q ss_pred C
Q 000959 1060 V 1060 (1208)
Q Consensus 1060 p 1060 (1208)
.
T Consensus 184 ~ 184 (416)
T 3zvl_A 184 A 184 (416)
T ss_dssp S
T ss_pred C
Confidence 6
No 47
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=95.66 E-value=0.0019 Score=63.96 Aligned_cols=84 Identities=13% Similarity=0.005 Sum_probs=55.6
Q ss_pred EeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHh---cCCC--ceeeeeEEecCCCCCCCCCCCCCCccccCCCccC
Q 000959 974 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL---DPKG--VLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG 1048 (1208)
Q Consensus 974 KLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiL---DP~g--kLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLG 1048 (1208)
.+.|++.++|+.+.+.|.++|.|++.+.++..+++.| ...| .+|.. ++..+++. ..++. +..+.+=+. .+|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~-i~~~~~~~-~~KP~-~~~~~~~~~-~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK-TYLSYEMK-MAKPE-PEIFKAVTE-DAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE-EEEHHHHT-CCTTC-HHHHHHHHH-HHT
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE-EEeecccC-CCCCC-HHHHHHHHH-HcC
Confidence 4679999999999877999999999999999888777 5444 24654 55443322 11110 001111222 356
Q ss_pred CC-CcEEEEcCCCc
Q 000959 1049 ME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD-srVVIIDDrpd 1061 (1208)
.+ +.+|+|+|++.
T Consensus 188 ~~~~~~~~vGD~~~ 201 (229)
T 4dcc_A 188 IDPKETFFIDDSEI 201 (229)
T ss_dssp CCGGGEEEECSCHH
T ss_pred CCHHHeEEECCCHH
Confidence 66 78999999973
No 48
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=95.65 E-value=0.0058 Score=59.92 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=52.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceee-eeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs-~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
....|++.++|+.+.+. |.++|+|++...++..+++. .-. .+|. +.+++.++.. ..++. . ..++-+-..+|.+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~~~~~~~~~~~-~~kp~-~-~~~~~~~~~lg~~ 181 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQANLMVTAFDVK-YGKPN-P-EPYLMALKKGGFK 181 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST-TTCCGGGEECGGGCS-SCTTS-S-HHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCCCeEEecccCC-CCCCC-C-HHHHHHHHHcCCC
Confidence 56789999999999875 99999999999999988876 433 3672 2355544321 11110 0 0111122235766
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
..+|.|+|+..
T Consensus 182 ~~~~i~vGD~~~ 193 (247)
T 3dv9_A 182 PNEALVIENAPL 193 (247)
T ss_dssp GGGEEEEECSHH
T ss_pred hhheEEEeCCHH
Confidence 78999999973
No 49
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=95.51 E-value=0.015 Score=57.15 Aligned_cols=49 Identities=24% Similarity=0.395 Sum_probs=41.7
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCC-ceeeeeE
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKG-VLFAGRV 1021 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~g-kLFs~RI 1021 (1208)
+.++||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. .+|...+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~ 135 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 135 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence 56899999999999865 9999999999999999999887553 4777654
No 50
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=95.46 E-value=0.051 Score=54.74 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=38.3
Q ss_pred EeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceee
Q 000959 974 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFA 1018 (1208)
Q Consensus 974 KLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs 1018 (1208)
.++||+.++|+.+.+ -+.++|.|.+.+.++..+++.+.-.. +|.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~ 188 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFA 188 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EEC
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhH
Confidence 789999999999986 49999999999999999999987543 443
No 51
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=95.38 E-value=0.0098 Score=63.47 Aligned_cols=63 Identities=16% Similarity=0.157 Sum_probs=49.1
Q ss_pred HHHHhhhcCceEEe-eeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcHHHHHHHHhc
Q 000959 1138 AEQRKILAGCRIVF-SRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVLLVVFSL 1206 (1208)
Q Consensus 1138 eiRrkVL~GC~IVF-SGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr~A~~~g 1206 (1208)
....++|+|+.|+. ||. ..+....|.+++.++||++..+.++.+|||||.+. |.|++.|++.|
T Consensus 5 ~~~s~lF~G~~f~V~sg~-----~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~~-~~k~~~~~~~g 68 (263)
T 3ii6_X 5 SKISNIFEDVEFCVMSGT-----DSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSE-NIRVKNIILSN 68 (263)
T ss_dssp -CCCCTTTTCEEEECCCC-------CCHHHHHHHHHHTTCEECSSCCTTEEEEECSSC-CHHHHHHHHSC
T ss_pred CcCcccCCCeEEEEEcCC-----CCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCCC-CHHHHHHHhcC
Confidence 34567999999965 662 23456789999999999999999888888888765 49999998865
No 52
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=95.35 E-value=0.017 Score=61.63 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=52.4
Q ss_pred HhhhcCceEEeeeeccCCCC-----------------------CC-CCchHHHHHHhcCCEEecccCCC------ccEEE
Q 000959 1141 RKILAGCRIVFSRVFPVGEA-----------------------NP-HLHPLWQTAEQFGAVCTKHIDDQ------VTHVV 1190 (1208)
Q Consensus 1141 rkVL~GC~IVFSGVfPlg~a-----------------------nP-e~h~LWrLAEsFGAtct~sId~~------VTHVV 1190 (1208)
..||.||.+++|+....... .| ....|.++++.+|+.++.++++. +||||
T Consensus 13 ~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~LI 92 (259)
T 1kzy_C 13 KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI 92 (259)
T ss_dssp TTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEE
T ss_pred CcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEEE
Confidence 57999999999998763110 01 22468899999999999999865 79999
Q ss_pred eCC-CCcHHHHHHHHhcC
Q 000959 1191 ANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1191 Aa~-~GTeKVr~A~~~gi 1207 (1208)
|.+ ..|.|+.+|++.|+
T Consensus 93 a~~~~rt~K~l~ala~g~ 110 (259)
T 1kzy_C 93 ADQHCRTRKYFLCLASGI 110 (259)
T ss_dssp ESSCCCSHHHHHHHHHTC
T ss_pred cCCCCCcHHHHHHHhcCC
Confidence 987 78999999999886
No 53
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=95.18 E-value=0.014 Score=58.24 Aligned_cols=84 Identities=12% Similarity=0.005 Sum_probs=56.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.+.+|. .+++.++... .+.. . ..++.+-..+|.+
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 185 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-STVFATDVVR-GRPF-P-DMALKVALELEVGH 185 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-EEECGGGSSS-CTTS-S-HHHHHHHHHHTCSC
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-eEecHHhcCC-CCCC-H-HHHHHHHHHcCCCC
Confidence 57889999999999865 99999999999999999998765442254 4665543211 1100 0 0112222235654
Q ss_pred -CcEEEEcCCC
Q 000959 1051 -SAVVIIDDSV 1060 (1208)
Q Consensus 1051 -srVVIIDDrp 1060 (1208)
+.+|+|+|+.
T Consensus 186 ~~~~i~vGD~~ 196 (277)
T 3iru_A 186 VNGCIKVDDTL 196 (277)
T ss_dssp GGGEEEEESSH
T ss_pred CccEEEEcCCH
Confidence 6799999986
No 54
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=95.16 E-value=0.0051 Score=60.32 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=34.6
Q ss_pred EEeccCHHHHHHHhhcc--cEEEEEcCCcHHHHHHHHHHhc
Q 000959 973 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLD 1011 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl--YEIVIYTAGtreYAd~VLdiLD 1011 (1208)
+.+.||+.++|++|.+. |.++|.|++.+.++..+++.++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 56889999999999874 9999999999999988888764
No 55
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=95.12 E-value=0.02 Score=57.27 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=47.4
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcC
Q 000959 919 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 997 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTA 997 (1208)
....+++|+|+||+....+. ..+ ....+.||+.++|++|.+ -|.++|.|+
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~------~~~-----------------------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn 80 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP------SDP-----------------------AEIVLRPQMLPAIATANRAGIPVVVVTN 80 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT------TCG-----------------------GGCCBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred cCCEEEEeCCCCcCCCCccc------CCc-----------------------ccCeECcCHHHHHHHHHHCCCEEEEEcC
Confidence 45678999999999763211 000 013468999999999986 599999999
Q ss_pred CcH---------------HHHHHHHHHhc
Q 000959 998 GNK---------------LYATEMAKVLD 1011 (1208)
Q Consensus 998 Gtr---------------eYAd~VLdiLD 1011 (1208)
+.. .++..+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 81 QSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp CHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 998 68888887764
No 56
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=94.77 E-value=0.038 Score=58.43 Aligned_cols=62 Identities=16% Similarity=0.137 Sum_probs=48.9
Q ss_pred hhcCceEEeeee--ccCCCCCCCCchHHHHHHhcCCEEecc-----c--CC-------------------CccEEEeCC-
Q 000959 1143 ILAGCRIVFSRV--FPVGEANPHLHPLWQTAEQFGAVCTKH-----I--DD-------------------QVTHVVANS- 1193 (1208)
Q Consensus 1143 VL~GC~IVFSGV--fPlg~anPe~h~LWrLAEsFGAtct~s-----I--d~-------------------~VTHVVAa~- 1193 (1208)
+|.||.|+||+. ++. .....|.+++++.|+++..+ + .. ..|||||..
T Consensus 2 lF~g~~F~ls~~~~~~~----~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~ 77 (241)
T 2vxb_A 2 IFDDCVFAFSGPVHEDA----YDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTF 77 (241)
T ss_dssp TTTTEEEEECCCSSTTS----SCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSC
T ss_pred CCCCcEEEEecCCCCch----hhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCC
Confidence 789999999997 332 23467899999999999987 2 21 249999987
Q ss_pred CCcHHHHHHHHhcCC
Q 000959 1194 LGTDKVLLVVFSLLS 1208 (1208)
Q Consensus 1194 ~GTeKVr~A~~~gi~ 1208 (1208)
..|.|+.+|++.|+.
T Consensus 78 ~rt~K~~~ala~gip 92 (241)
T 2vxb_A 78 SRKVKYLEALAFNIP 92 (241)
T ss_dssp CCCHHHHHHHHHTCC
T ss_pred CCcHHHHHHHHcCCC
Confidence 459999999998873
No 57
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.71 E-value=0.024 Score=55.33 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=38.7
Q ss_pred hhhcCceEEeeeeccCCCCCCCCch-HHHHHHhcCCEEecccCCCccEEEeCCCCcHHHH
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHP-LWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVL 1200 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~-LWrLAEsFGAtct~sId~~VTHVVAa~~GTeKVr 1200 (1208)
..|+||+|+| .|.... ..+.. +-++|...||++.+++++.|||||+.....+.+.
T Consensus 19 ~~F~g~~iy~---v~~~~g-~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~ 74 (120)
T 2coe_A 19 IKFQDLVVFI---LEKKMG-TTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVL 74 (120)
T ss_dssp CSCTTCEEEE---ECTTTC-HHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHH
T ss_pred cccCCeEEEE---eecccc-hHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCCCHHHHH
Confidence 5789999988 333321 11223 3467999999999999999999999755444343
No 58
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=94.55 E-value=0.057 Score=52.86 Aligned_cols=101 Identities=13% Similarity=0.044 Sum_probs=65.8
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAG 998 (1208)
-..+++|||+||+++... +.+ ....+-.+.|...++|+++.+ -+.++|.|+.
T Consensus 8 ik~i~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~ 60 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLH--YDA-------------------------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGR 60 (180)
T ss_dssp CCEEEEECTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEeCCCCcCCCCee--ecc-------------------------CcceeeeeccchHHHHHHHHHCCCeEEEEeCC
Confidence 357899999999976421 000 012334567788899999975 5999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCc
Q 000959 999 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 999 treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpd 1061 (1208)
...++..+++.+.-.. +|.. +.. ++ ..++.+-..+|.+ +.++.|.|+..
T Consensus 61 ~~~~~~~~~~~lgl~~-~~~~-------~k~--k~----~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 61 DSPILRRRIADLGIKL-FFLG-------KLE--KE----TACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp CCHHHHHHHHHHTCCE-EEES-------CSC--HH----HHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred CcHHHHHHHHHcCCce-eecC-------CCC--cH----HHHHHHHHHcCCCHHHEEEECCCHH
Confidence 9999999999887543 3421 100 00 1122222234555 68999999874
No 59
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=94.46 E-value=0.019 Score=57.68 Aligned_cols=79 Identities=14% Similarity=0.031 Sum_probs=48.8
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+++.||+.++|+.|.+ -|.+.|.|+..+..+.. ++. .+|. .+++.++.. ..+.. +..+.+-+. .+|..
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~---~~~---~~~d-~v~~~~~~~-~~KP~-p~~~~~a~~-~l~~~~ 104 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTP---LAA---PVND-WMIAAPRPT-AGWPQ-PDACWMALM-ALNVSQ 104 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHH---HHT---TTTT-TCEECCCCS-SCTTS-THHHHHHHH-HTTCSC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHH---hcC---ccCC-EEEECCcCC-CCCCC-hHHHHHHHH-HcCCCC
Confidence 4567999999999975 59999999999888744 343 3454 356554321 11110 011222233 24553
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
+.+|+|.|+..
T Consensus 105 ~~~~v~VGDs~~ 116 (196)
T 2oda_A 105 LEGCVLISGDPR 116 (196)
T ss_dssp STTCEEEESCHH
T ss_pred CccEEEEeCCHH
Confidence 57999999863
No 60
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=93.97 E-value=0.046 Score=62.11 Aligned_cols=116 Identities=17% Similarity=0.158 Sum_probs=72.2
Q ss_pred HhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEE-EEeccCHHHHHHHhhcc-c
Q 000959 913 KKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMW-TKLRPGIWTFLERASKL-F 990 (1208)
Q Consensus 913 ~rLLs~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~y-VKLRPGLdEFLeeLSkl-Y 990 (1208)
..+...+.++||+|||+||..-... .+++. .+++. .++- -..-||+.++|+.|.+. +
T Consensus 215 ~~l~~~~iK~lv~DvDnTL~~G~l~-----~dG~~---------------~~~~~-dg~g~g~~ypgv~e~L~~Lk~~Gi 273 (387)
T 3nvb_A 215 AAIQGKFKKCLILDLDNTIWGGVVG-----DDGWE---------------NIQVG-HGLGIGKAFTEFQEWVKKLKNRGI 273 (387)
T ss_dssp HHHTTCCCCEEEECCBTTTBBSCHH-----HHCGG---------------GSBCS-SSSSTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCcEEEEcCCCCCCCCeec-----CCCce---------------eEEec-cCccccccCHHHHHHHHHHHHCCC
Confidence 4567888999999999999875420 00100 00110 0010 23458999999999875 9
Q ss_pred EEEEEcCCcHHHHHHHHHH-----hcCCCceeeeeEEecCCCCCCCCCCCCCCccccCC---CccCCC-CcEEEEcCCCc
Q 000959 991 EMHLYTMGNKLYATEMAKV-----LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLE---GVLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 991 EIVIYTAGtreYAd~VLdi-----LDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLs---rVLGrD-srVVIIDDrpd 1061 (1208)
.+.|.|+..+.++..+++. |...+ +|.- +.... ++..-+. ..+|.. +.+|+|+|+..
T Consensus 274 ~laI~Snn~~~~v~~~l~~~~~~~l~l~~-~~~v-~~~~K------------PKp~~l~~al~~Lgl~pee~v~VGDs~~ 339 (387)
T 3nvb_A 274 IIAVCSKNNEGKAKEPFERNPEMVLKLDD-IAVF-VANWE------------NKADNIRTIQRTLNIGFDSMVFLDDNPF 339 (387)
T ss_dssp EEEEEEESCHHHHHHHHHHCTTCSSCGGG-CSEE-EEESS------------CHHHHHHHHHHHHTCCGGGEEEECSCHH
T ss_pred EEEEEcCCCHHHHHHHHhhccccccCccC-ccEE-EeCCC------------CcHHHHHHHHHHhCcCcccEEEECCCHH
Confidence 9999999999999999986 33333 4431 11110 2222222 235665 78999999875
Q ss_pred cc
Q 000959 1062 VW 1063 (1208)
Q Consensus 1062 VW 1063 (1208)
-.
T Consensus 340 Di 341 (387)
T 3nvb_A 340 ER 341 (387)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 61
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=93.60 E-value=0.072 Score=56.56 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=49.5
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeee-eccceEEEEeccCHHHHHHHhhc-ccEEE
Q 000959 916 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFR-FPHMGMWTKLRPGIWTFLERASK-LFEMH 993 (1208)
Q Consensus 916 Ls~rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFr-lp~~~~yVKLRPGLdEFLeeLSk-lYEIV 993 (1208)
...++..+|+||||||+.+..+ ...... . ..++...|. +- ..--..+.||+.+||+.|.+ -+.|+
T Consensus 55 ~~~~~kavifDlDGTLld~~~~------~~~~~~---~---~~~~~~~~~~~~-~~~~~~~~pg~~e~L~~L~~~Gi~i~ 121 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSPH------QAMSVK---T---GKGYPYKWDDWI-NKAEAEALPGSIDFLKYTESKGVDIY 121 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHHH------HHHHHH---H---SCCTTTTHHHHH-HHCCCEECTTHHHHHHHHHHTTCEEE
T ss_pred cCCCCCEEEEeCcccCcCCHHH------HHHHHh---c---ccchHHHHHHHH-HcCCCCcCccHHHHHHHHHHCCCEEE
Confidence 4667889999999999987410 000000 0 000000000 00 00014577999999999975 49999
Q ss_pred EEcCCc---HHHHHHHHHHhcCC
Q 000959 994 LYTMGN---KLYATEMAKVLDPK 1013 (1208)
Q Consensus 994 IYTAGt---reYAd~VLdiLDP~ 1013 (1208)
|.|+.. +..+...++.+.-.
T Consensus 122 iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 122 YISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EEEEEEGGGHHHHHHHHHHHTCS
T ss_pred EEcCCchhHHHHHHHHHHHcCCC
Confidence 999988 44555555555433
No 62
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=93.32 E-value=0.094 Score=55.99 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=39.6
Q ss_pred HHhhhcCceEEeeeeccCCCCCC--CCch---HHHHHHhcCCEEecccCCCccEEEeCCCC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANP--HLHP---LWQTAEQFGAVCTKHIDDQVTHVVANSLG 1195 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anP--e~h~---LWrLAEsFGAtct~sId~~VTHVVAa~~G 1195 (1208)
+..+|+||++.|.+.-..+...+ ...+ +..++..+||+|+..+++.|||||+....
T Consensus 161 ~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~ 221 (263)
T 3ii6_X 161 PLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDH 221 (263)
T ss_dssp GGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCC
T ss_pred cchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCC
Confidence 45689999999976433222111 0112 24568999999999999999999998743
No 63
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=93.20 E-value=0.003 Score=60.56 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=51.8
Q ss_pred EEEeccCHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHH-hcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCC
Q 000959 972 WTKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKV-LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1049 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLS-klYEIVIYTAGtreYAd~VLdi-LDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGr 1049 (1208)
++.+.|++.++|+.+. ..+.++|.|++...++..++.. +.-. .+|.. +++.++.. ..++. + ..++.+-..+|.
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~~~~ 163 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADH-IYLSQDLG-MRKPE-A-RIYQHVLQAEGF 163 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSE-EEEHHHHT-CCTTC-H-HHHHHHHHHHTC
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheee-EEEecccC-CCCCC-H-HHHHHHHHHcCC
Confidence 4788999999999998 5699999999998887665543 2211 24543 45433221 11110 0 011111123566
Q ss_pred C-CcEEEEcCCCc
Q 000959 1050 E-SAVVIIDDSVR 1061 (1208)
Q Consensus 1050 D-srVVIIDDrpd 1061 (1208)
+ +.+|+|+|+..
T Consensus 164 ~~~~~~~vgD~~~ 176 (206)
T 2b0c_A 164 SPSDTVFFDDNAD 176 (206)
T ss_dssp CGGGEEEEESCHH
T ss_pred CHHHeEEeCCCHH
Confidence 6 78999999874
No 64
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=92.50 E-value=0.12 Score=51.22 Aligned_cols=101 Identities=17% Similarity=0.082 Sum_probs=61.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAG 998 (1208)
-..+++|||+||+.+...- .. . ... -..+.+++++ +|+.|.+ -|.++|.|+.
T Consensus 19 ik~vifD~DGTL~d~~~~~--~~------------~-----~~~------~~~~~~~~~~--~l~~L~~~g~~~~i~T~~ 71 (189)
T 3mn1_A 19 IKLAVFDVDGVLTDGRLYF--ME------------D-----GSE------IKTFNTLDGQ--GIKMLIASGVTTAIISGR 71 (189)
T ss_dssp CCEEEECSTTTTSCSEEEE--ET------------T-----SCE------EEEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred CCEEEEcCCCCcCCccEee--cc------------C-----CcE------eeeeccccHH--HHHHHHHCCCEEEEEECc
Confidence 4579999999999874210 00 0 000 0123344444 8888875 5999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCc
Q 000959 999 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 999 treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpd 1061 (1208)
.+.++..+++.+.-.. +|... .+ ++ ..++.+...+|.+ ..++.|.|+..
T Consensus 72 ~~~~~~~~~~~lgl~~-~f~~~---~~------K~----~~~~~~~~~~g~~~~~~~~vGD~~n 121 (189)
T 3mn1_A 72 KTAIVERRAKSLGIEH-LFQGR---ED------KL----VVLDKLLAELQLGYEQVAYLGDDLP 121 (189)
T ss_dssp CCHHHHHHHHHHTCSE-EECSC---SC------HH----HHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred ChHHHHHHHHHcCCHH-HhcCc---CC------hH----HHHHHHHHHcCCChhHEEEECCCHH
Confidence 9999999999986543 34321 00 00 1122222235665 78999999864
No 65
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.035 Score=58.35 Aligned_cols=52 Identities=8% Similarity=-0.107 Sum_probs=25.5
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLG 1195 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~G 1195 (1208)
...+|+||+++|++..+.. ....+..+.+.+||+++.+++..|||||+...+
T Consensus 157 ~~~lF~g~~~yl~~~~~~~----~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~ 208 (264)
T 1z56_C 157 PLFLFSNRIAYVPRRKIST----EDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDP 208 (264)
T ss_dssp CCC------------------------CHHHHHHHTTSCCCCSSSCSEEECCCSST
T ss_pred chhhhCCeEEEEecCCCch----hHHHHHHHHHHcCCEEecccCCCEEEEEeCCCc
Confidence 3568999999999975432 123456779999999999999888888886543
No 66
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=92.34 E-value=0.18 Score=55.89 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=40.9
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeee
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGR 1020 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~R 1020 (1208)
+.++||+.++|+.|.+. |.++|.|++...++..+++.+.-.. +|.+.
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~ 302 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANE 302 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEEC
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeee
Confidence 57899999999999876 9999999999999999999987653 66554
No 67
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=92.18 E-value=0.043 Score=54.07 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=32.9
Q ss_pred EEeccCHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHHHh
Q 000959 973 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVL 1010 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk--lYEIVIYTAGtreYAd~VLdiL 1010 (1208)
+.+.||+.++|+.|.+ .|.+.|.|++.+.++..+++.+
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~ 113 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY 113 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh
Confidence 5688999999999987 5999999999998887777654
No 68
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=92.13 E-value=0.16 Score=49.88 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=43.2
Q ss_pred HHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCC
Q 000959 982 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1059 (1208)
Q Consensus 982 FLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDr 1059 (1208)
+|+++.+ -|.++|.|+..+.++..+++.+.-. +|... .. ++ ..++.+...+|.+ ..++.|.|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~------~~---k~----~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGI------DR---KD----LALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC------SC---HH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC------CC---hH----HHHHHHHHHcCCCHHHEEEEcCC
Confidence 7888865 5999999999999999999998755 44321 00 00 1122222234555 678889887
Q ss_pred Cc
Q 000959 1060 VR 1061 (1208)
Q Consensus 1060 pd 1061 (1208)
..
T Consensus 112 ~n 113 (176)
T 3mmz_A 112 VN 113 (176)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 69
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=91.58 E-value=0.31 Score=46.18 Aligned_cols=113 Identities=17% Similarity=0.072 Sum_probs=64.6
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAG 998 (1208)
-..+++|+|+||+.+...- .+. . . .+ .-...+.++ +|+.+.+ -|.++|.|+.
T Consensus 4 ik~vifD~DGTL~~~~~~~--~~~-~-------------~---~~------~~~~~~~~~--~l~~l~~~g~~~~i~T~~ 56 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMFY--DQT-G-------------N---EW------KKFNTSDSA--GIFWAHNKGIPVGILTGE 56 (164)
T ss_dssp CCEEEECSTTTTSSSEEEE--CSS-S-------------C---EE------EEEEGGGHH--HHHHHHHTTCCEEEECSS
T ss_pred ceEEEEcCCCceEcCcEEE--cCC-C-------------c---EE------EEecCChHH--HHHHHHHCCCEEEEEeCC
Confidence 3579999999999865210 010 0 0 00 012233433 7888875 4999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCcccccCCCCeEEe
Q 000959 999 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVV 1073 (1208)
Q Consensus 999 treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdVW~~qpdNlI~I 1073 (1208)
.+.++..+++.+.-.. +|... .. ++ ..++.+-..+|.+ +.+++|.|+..=...-...++.+
T Consensus 57 ~~~~~~~~~~~~gl~~-~~~~~---kp------k~----~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~ 118 (164)
T 3e8m_A 57 KTEIVRRRAEKLKVDY-LFQGV---VD------KL----SAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAG 118 (164)
T ss_dssp CCHHHHHHHHHTTCSE-EECSC---SC------HH----HHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEE
T ss_pred ChHHHHHHHHHcCCCE-eeccc---CC------hH----HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 9999999999886432 33221 00 00 1122222234655 78999999874332222344443
No 70
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=91.42 E-value=0.17 Score=48.87 Aligned_cols=27 Identities=7% Similarity=0.178 Sum_probs=24.2
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCc
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGN 999 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGt 999 (1208)
+.+.||+.++|+.|.+.|.+.|-|++.
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~ 94 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAAM 94 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC-
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCCC
Confidence 578899999999999889999999983
No 71
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=90.58 E-value=0.19 Score=54.47 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=53.1
Q ss_pred cCCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh
Q 000959 917 SARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 987 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~--------~evdP~-~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS 987 (1208)
..+|..+|||+||||+..... ...++. ..+|+. .-....-||+.+||+.|.
T Consensus 55 ~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------------~~~~~~~pG~~ell~~L~ 114 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVD--------------------ARQSRAVPGAVEFNNYVN 114 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------------HTCCEECTTHHHHHHHHH
T ss_pred CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHH--------------------cCCCCCCccHHHHHHHHH
Confidence 467889999999999987521 001110 001110 013678899999999997
Q ss_pred c-ccEEEEEcCCcH----HHHHHHHHHhcCCCceeeeeEEecC
Q 000959 988 K-LFEMHLYTMGNK----LYATEMAKVLDPKGVLFAGRVISRG 1025 (1208)
Q Consensus 988 k-lYEIVIYTAGtr----eYAd~VLdiLDP~gkLFs~RIiSRD 1025 (1208)
+ -+.|+|.|+-.. ..+..-++.+.-.. ++..+||-|.
T Consensus 115 ~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~ 156 (262)
T 3ocu_A 115 SHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VEESAFYLKK 156 (262)
T ss_dssp HTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC-CSGGGEEEES
T ss_pred HCCCeEEEEeCCCccchHHHHHHHHHHcCcCc-ccccceeccC
Confidence 5 599999998765 35555555553222 2222455554
No 72
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=90.11 E-value=0.27 Score=53.20 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=46.8
Q ss_pred cCCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh
Q 000959 917 SARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 987 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt~~--------~evdP~-~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS 987 (1208)
..+|..+|||+||||+....+ ...++. ..+|+. .-....-||+.+||+.|.
T Consensus 55 ~g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------------~g~~~~~pg~~ell~~L~ 114 (260)
T 3pct_A 55 KGKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVD--------------------ARQSAAIPGAVEFSNYVN 114 (260)
T ss_dssp ---CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------------TTCCEECTTHHHHHHHHH
T ss_pred CCCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHH--------------------cCCCCCCccHHHHHHHHH
Confidence 345679999999999987521 001110 001110 013678899999999997
Q ss_pred c-ccEEEEEcCCcH----HHHHHHHHHhc
Q 000959 988 K-LFEMHLYTMGNK----LYATEMAKVLD 1011 (1208)
Q Consensus 988 k-lYEIVIYTAGtr----eYAd~VLdiLD 1011 (1208)
+ -+.|+|.|+-.. ..+..-++.+.
T Consensus 115 ~~G~~i~ivTgR~~~~~r~~T~~~L~~lG 143 (260)
T 3pct_A 115 ANGGTMFFVSNRRDDVEKAGTVDDMKRLG 143 (260)
T ss_dssp HTTCEEEEEEEEETTTSHHHHHHHHHHHT
T ss_pred HCCCeEEEEeCCCccccHHHHHHHHHHcC
Confidence 5 599999998755 35555555554
No 73
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=89.77 E-value=0.11 Score=52.55 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=41.8
Q ss_pred HHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCC
Q 000959 982 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1059 (1208)
Q Consensus 982 FLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDr 1059 (1208)
-|+.|.+ -|.+.|.|+..+..+..+++.|.-.. +|... . -++ ..++.+...+|.+ ..++.|.|+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~~--------k-~k~----~~~~~~~~~~~~~~~~~~~vGD~ 125 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL-IYQGQ--------D-DKV----QAYYDICQKLAIAPEQTGYIGDD 125 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EECSC--------S-SHH----HHHHHHHHHHCCCGGGEEEEESS
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeCC--------C-CcH----HHHHHHHHHhCCCHHHEEEEcCC
Confidence 3777765 59999999999999999999886442 23210 0 000 1122222234655 688899887
Q ss_pred Cc
Q 000959 1060 VR 1061 (1208)
Q Consensus 1060 pd 1061 (1208)
..
T Consensus 126 ~n 127 (195)
T 3n07_A 126 LI 127 (195)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 74
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=89.73 E-value=0.35 Score=45.64 Aligned_cols=84 Identities=18% Similarity=0.158 Sum_probs=57.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+..+|++.++|+++.+. |.++|+|++.+.++..+++.+.-.. +|.. +++.++... .++. . ..++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 162 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFDI-VLSGEEFKE-SKPN-P-EIYLTALKQLNVQA 162 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGCSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-heee-EeecccccC-CCCC-h-HHHHHHHHHcCCCh
Confidence 46899999999999876 9999999999999999999876544 6764 555543221 1110 0 0111222235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.++.|+|+..
T Consensus 163 ~~~~~iGD~~~ 173 (214)
T 3e58_A 163 SRALIIEDSEK 173 (214)
T ss_dssp GGEEEEECSHH
T ss_pred HHeEEEeccHh
Confidence 78999999963
No 75
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=89.73 E-value=0.31 Score=47.10 Aligned_cols=84 Identities=20% Similarity=0.125 Sum_probs=57.6
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.+||+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++.. ..++. . ..++.+-..+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~l~~~~ 164 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKIN-IVTRDDVS-YGKPD-P-DLFLAAAKKIGAPI 164 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSSC-EECGGGSS-CCTTS-T-HHHHHHHHHTTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhhe-eeccccCC-CCCCC-h-HHHHHHHHHhCCCH
Confidence 67899999999999876 9999999999999999999876544 5654 45444321 11100 0 1112222245766
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
..+|.|+|+..
T Consensus 165 ~~~i~iGD~~~ 175 (233)
T 3s6j_A 165 DECLVIGDAIW 175 (233)
T ss_dssp GGEEEEESSHH
T ss_pred HHEEEEeCCHH
Confidence 78999999974
No 76
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.70 E-value=0.27 Score=46.20 Aligned_cols=48 Identities=23% Similarity=0.451 Sum_probs=37.6
Q ss_pred HhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecc-----------cCCCccEEEeCCCC
Q 000959 1141 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKH-----------IDDQVTHVVANSLG 1195 (1208)
Q Consensus 1141 rkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~s-----------Id~~VTHVVAa~~G 1195 (1208)
..+|+||++.+++=+| ...+-.+++.||+.+..+ .+..+||+|+.++.
T Consensus 10 ~~LF~g~~F~i~~e~p-------~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~ 68 (100)
T 2ep8_A 10 KKLFEGLKFFLNREVP-------REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPG 68 (100)
T ss_dssp CCTTSSCEEECCSSSC-------HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTT
T ss_pred HHHcCCcEEEEecCCC-------HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccc
Confidence 3589999999986333 346778899999999875 25789999998754
No 77
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=89.51 E-value=0.66 Score=45.72 Aligned_cols=67 Identities=16% Similarity=0.104 Sum_probs=43.7
Q ss_pred HHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcC
Q 000959 981 TFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDD 1058 (1208)
Q Consensus 981 EFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDD 1058 (1208)
.+|+++.+. +.++|.|+....++..+++.+.-.. +|.. . . -++ ..++.+...+|.+ ..+++|+|
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-~~~~-----~---k-pk~----~~~~~~~~~~g~~~~~~~~iGD 125 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-LYQG-----Q---S-NKL----IAFSDLLEKLAIAPENVAYVGD 125 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-EECS-----C---S-CSH----HHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-eecC-----C---C-CCH----HHHHHHHHHcCCCHHHEEEECC
Confidence 388888765 9999999999999999999886432 3321 1 0 000 1122222234655 78999999
Q ss_pred CCc
Q 000959 1059 SVR 1061 (1208)
Q Consensus 1059 rpd 1061 (1208)
+..
T Consensus 126 ~~~ 128 (188)
T 2r8e_A 126 DLI 128 (188)
T ss_dssp SGG
T ss_pred CHH
Confidence 874
No 78
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=89.30 E-value=0.32 Score=49.93 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=62.1
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAG 998 (1208)
-..+|+|||+||+.+... +.. . ...+ ....+++++ +|+.|.+ -|.+.|.|+.
T Consensus 49 ik~viFDlDGTL~Ds~~~----------~~~----~-----~~~~------~~~~~~d~~--~L~~L~~~G~~l~I~T~~ 101 (211)
T 3ij5_A 49 IRLLICDVDGVMSDGLIY----------MGN----Q-----GEEL------KAFNVRDGY--GIRCLITSDIDVAIITGR 101 (211)
T ss_dssp CSEEEECCTTTTSSSEEE----------EET----T-----SCEE------EEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred CCEEEEeCCCCEECCHHH----------Hhh----h-----hHHH------HHhccchHH--HHHHHHHCCCEEEEEeCC
Confidence 357999999999987521 000 0 0000 112334444 8888875 5999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCccc
Q 000959 999 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 1063 (1208)
Q Consensus 999 treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpdVW 1063 (1208)
...++..+++.+.-.. +|... .+ ++ ..++.+...+|.+ ..++.|-|+..=.
T Consensus 102 ~~~~~~~~l~~lgi~~-~f~~~---k~------K~----~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 102 RAKLLEDRANTLGITH-LYQGQ---SD------KL----VAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp CCHHHHHHHHHHTCCE-EECSC---SS------HH----HHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CHHHHHHHHHHcCCch-hhccc---CC------hH----HHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 9999999999986543 33321 00 00 1122222235655 7899998886433
No 79
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=89.24 E-value=0.069 Score=54.33 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=31.0
Q ss_pred EeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhc
Q 000959 974 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLD 1011 (1208)
Q Consensus 974 KLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLD 1011 (1208)
...|++.++|+.|.+ -|.++|.|++.+.++..+++.|.
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~ 126 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA 126 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 357899999999975 59999999998887777776653
No 80
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=89.22 E-value=0.25 Score=48.03 Aligned_cols=84 Identities=25% Similarity=0.166 Sum_probs=59.5
Q ss_pred EEeccCHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLS-klYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
++..||+.++|+.+. ..|.+.|.|++.+.++..+++.+.-.. +|.. +++.++.. ..+++ +..|.+=++ .+|..
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd~-~~~~~~~~-~~KP~-p~~~~~a~~-~lg~~p 157 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVK-NGKPD-PEIYLLVLE-RLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSS-SCTTS-THHHHHHHH-HHTCCG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cccc-cccccccC-CCccc-HHHHHHHHH-hhCCCc
Confidence 678999999999996 569999999999999999999988765 7875 44444322 11211 111223343 35766
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+|+|+|++.
T Consensus 158 ~e~l~VgDs~~ 168 (216)
T 3kbb_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred cceEEEecCHH
Confidence 78999999863
No 81
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=89.21 E-value=0.35 Score=46.79 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=57.3
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+.+.|.++|+|++.+.++..+++.+.-.. +|.. +++.++... .++. . ..++-+-..+|.+ +
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 180 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFKK-IILSEDLGV-LKPR-P-EIFHFALSATQSELR 180 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTS-H-HHHHHHHHHTTCCGG
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hcee-EEEeccCCC-CCCC-H-HHHHHHHHHcCCCcc
Confidence 567999999999999889999999999999999999886544 6764 555443221 1110 0 0111122245766 7
Q ss_pred cEEEEcCCC
Q 000959 1052 AVVIIDDSV 1060 (1208)
Q Consensus 1052 rVVIIDDrp 1060 (1208)
.+|.|+|++
T Consensus 181 ~~~~iGD~~ 189 (240)
T 3qnm_A 181 ESLMIGDSW 189 (240)
T ss_dssp GEEEEESCT
T ss_pred cEEEECCCc
Confidence 999999995
No 82
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=89.19 E-value=0.38 Score=46.68 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=57.2
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccC-CC-
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG-ME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLG-rD- 1050 (1208)
+...|++.++|+.+.+.|.++|+|++.+.++..+++.+.-.. +|.. +++.++... .++. . ..++-+-..+| .+
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FFKD-IFVSEDTGF-QKPM-K-EYFNYVFERIPQFSA 176 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTTS-CTTC-H-HHHHHHHHTSTTCCG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hhhe-EEEecccCC-CCCC-h-HHHHHHHHHcCCCCh
Confidence 568899999999998779999999999999999999876543 6764 554443221 1110 0 01112222467 66
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|.|+|+.
T Consensus 177 ~~~i~vGD~~ 186 (238)
T 3ed5_A 177 EHTLIIGDSL 186 (238)
T ss_dssp GGEEEEESCT
T ss_pred hHeEEECCCc
Confidence 8899999996
No 83
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=88.61 E-value=0.47 Score=47.72 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=56.7
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+.++||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|.. +++.+++.. .+.. . ..++.+-..+|.+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~ 187 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSE-MLGGQSLPE-IKPH-P-APFYYLCGKFGLYP 187 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTTSSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eEEE-EEecccCCC-CCcC-H-HHHHHHHHHhCcCh
Confidence 57889999999999865 9999999999999999999886443 5653 665443221 1110 0 0111121235665
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
..+++|+|+..
T Consensus 188 ~~~~~vGD~~~ 198 (243)
T 2hsz_A 188 KQILFVGDSQN 198 (243)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEEcCCHH
Confidence 78999999863
No 84
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=88.60 E-value=0.16 Score=50.69 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=42.1
Q ss_pred HHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCC
Q 000959 982 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 1059 (1208)
Q Consensus 982 FLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDr 1059 (1208)
-|+.|.+ -|.++|.|+..+.++..+++.+.-.. +|... .. ++ ..++.+-..+|.+ ..+++|.|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~~~---kp------k~----~~~~~~~~~~~~~~~~~~~vGD~ 119 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YYKGQ---VD------KR----SAYQHLKKTLGLNDDEFAYIGDD 119 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EECSC---SS------CH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ceeCC---CC------hH----HHHHHHHHHhCCCHHHEEEECCC
Confidence 3777765 49999999999999999999886432 33221 00 00 1122222235665 789999998
Q ss_pred Cc
Q 000959 1060 VR 1061 (1208)
Q Consensus 1060 pd 1061 (1208)
..
T Consensus 120 ~~ 121 (191)
T 3n1u_A 120 LP 121 (191)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 85
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=88.55 E-value=0.42 Score=47.26 Aligned_cols=84 Identities=19% Similarity=0.226 Sum_probs=56.9
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+.+.||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|.. +++.++... .++. . ..++.+-..+|.+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YFDL-IVGGDTFGE-KKPS-P-TPVLKTLEILGEEP 156 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTSSCT-TCCT-T-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-HheE-EEecCcCCC-CCCC-h-HHHHHHHHHhCCCc
Confidence 67899999999999865 9999999999999999999886443 6654 665443221 1110 0 0111121234665
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+++|+|+..
T Consensus 157 ~~~~~vGD~~~ 167 (222)
T 2nyv_A 157 EKALIVGDTDA 167 (222)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEECCCHH
Confidence 78999999853
No 86
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=88.50 E-value=0.58 Score=46.37 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAG 998 (1208)
.+.+++||||||+.... + .+ ...-|++.+.|+++.+ -+.++|+|.-
T Consensus 3 ~k~i~~DlDGTL~~~~~-----~---~i-------------------------~~~~~~~~~al~~l~~~G~~iii~TgR 49 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRY-----P---RI-------------------------GEEIPFAVETLKLLQQEKHRLILWSVR 49 (142)
T ss_dssp CCEEEECCBTTTBCSCT-----T---SC-------------------------CCBCTTHHHHHHHHHHTTCEEEECCSC
T ss_pred CeEEEEECcCCCCCCCC-----c---cc-------------------------cccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34789999999997531 0 00 0135789999999975 5999999998
Q ss_pred cHHHHHHHHHHhcCCCc
Q 000959 999 NKLYATEMAKVLDPKGV 1015 (1208)
Q Consensus 999 treYAd~VLdiLDP~gk 1015 (1208)
.......+++.|+..|-
T Consensus 50 ~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 50 EGELLDEAIEWCRARGL 66 (142)
T ss_dssp CHHHHHHHHHHHHTTTC
T ss_pred CcccHHHHHHHHHHcCC
Confidence 87777778888887763
No 87
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=88.20 E-value=0.3 Score=48.48 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=56.2
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|.|++...++..+++.+.-.. +|.. +++.++... .++. . ..++-+-..+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~g~~~ 167 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFEH-VIISDFEGV-KKPH-P-KIFKKALKAFNVKP 167 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTC-H-HHHHHHHHHHTCCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hccE-EEEeCCCCC-CCCC-H-HHHHHHHHHcCCCc
Confidence 45789999999999875 9999999999999999999886543 6764 554443221 1110 0 0111111235666
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|.|+|+.
T Consensus 168 ~~~i~iGD~~ 177 (241)
T 2hoq_A 168 EEALMVGDRL 177 (241)
T ss_dssp GGEEEEESCT
T ss_pred ccEEEECCCc
Confidence 7899999996
No 88
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=88.12 E-value=0.43 Score=46.65 Aligned_cols=84 Identities=19% Similarity=0.187 Sum_probs=57.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++.. ..++. . ..++-+-..+|.+
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~lg~~~ 177 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLTV-IAGDDSVE-RGKPH-P-DMALHVARGLGIPP 177 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCSE-EECTTTSS-SCTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-heee-EEeCCCCC-CCCCC-H-HHHHHHHHHcCCCH
Confidence 45799999999999875 9999999999999999999876443 5654 55544321 11100 0 1112222235766
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
..+|.|+|+..
T Consensus 178 ~~~i~vGD~~~ 188 (237)
T 4ex6_A 178 ERCVVIGDGVP 188 (237)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 78999999973
No 89
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=88.01 E-value=0.47 Score=46.12 Aligned_cols=84 Identities=13% Similarity=0.148 Sum_probs=57.3
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|+|++...++..+++.+.-.. +|.. +++.++... .++. . ..++-+-..+|.+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 172 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFDH-VLSVDAVRL-YKTA-P-AAYALAPRAFGVPA 172 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCSE-EEEGGGTTC-CTTS-H-HHHTHHHHHHTSCG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcCE-EEEecccCC-CCcC-H-HHHHHHHHHhCCCc
Confidence 66789999999999876 9999999999999999999876554 6754 555543321 1110 0 0011111235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+|.|+|+..
T Consensus 173 ~~~~~vGD~~~ 183 (233)
T 3umb_A 173 AQILFVSSNGW 183 (233)
T ss_dssp GGEEEEESCHH
T ss_pred ccEEEEeCCHH
Confidence 78999999853
No 90
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=87.93 E-value=0.34 Score=46.71 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=56.4
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+.+.|++.++|+.+.+.|.++|.|++.+.++..+++.+.-. .+|.. +++.+++. ..++. . ..++-+-..+|.+ +
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~-~~~~~~~~-~~KP~-~-~~~~~~~~~~~~~~~ 156 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFM-MRMAV-TISADDTP-KRKPD-P-LPLLTALEKVNVAPQ 156 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGG-GGEEE-EECGGGSS-CCTTS-S-HHHHHHHHHTTCCGG
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChH-hhccE-EEecCcCC-CCCCC-c-HHHHHHHHHcCCCcc
Confidence 57899999999999866999999999999999999877543 36764 55544321 11110 0 0111221235666 7
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.++.|+|+..
T Consensus 157 ~~i~vGD~~~ 166 (209)
T 2hdo_A 157 NALFIGDSVS 166 (209)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCChh
Confidence 8999999864
No 91
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=86.94 E-value=0.87 Score=43.26 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=57.2
Q ss_pred EeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCC-CceeeeeEEecCCCCC--CC-CCCCCCCccccCCCccC
Q 000959 974 KLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPK-GVLFAGRVISRGDDGD--PF-DGDERVPKSKDLEGVLG 1048 (1208)
Q Consensus 974 KLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~-gkLFs~RIiSRDDc~~--~f-dG~er~~yvKDLsrVLG 1048 (1208)
.++|++.++|+.+.+. |.++|.|++...|+..+++.+.-. ..+|...++...+... +. .+..+..+.+-|...+|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 3789999999999865 999999999999999999988653 2356544432221100 00 00001123444544556
Q ss_pred CC-CcEEEEcCCCc
Q 000959 1049 ME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD-srVVIIDDrpd 1061 (1208)
.+ +.++.|.|+..
T Consensus 162 ~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 162 LIDGEVIAIGDGYT 175 (219)
T ss_dssp GCCSEEEEEESSHH
T ss_pred CCCCCEEEEECCHh
Confidence 55 78999999863
No 92
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=86.86 E-value=0.37 Score=49.59 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=56.7
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+.+.||+.++|+.+.+.|.++|.|++.+.++..+++.++-.. +|.. ++..++.. ..++. +..+.+=+. .+|.+ +
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~-~~KP~-p~~~~~~~~-~~~~~~~ 194 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDA-IVIGGEQK-EEKPA-PSIFYHCCD-LLGVQPG 194 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGSS-SCTTC-HHHHHHHHH-HHTCCGG
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhhe-EEecCCCC-CCCCC-HHHHHHHHH-HcCCChh
Confidence 467899999999999889999999999999999999887654 7765 55444322 11110 001112222 35666 7
Q ss_pred cEEEEcCC
Q 000959 1052 AVVIIDDS 1059 (1208)
Q Consensus 1052 rVVIIDDr 1059 (1208)
.+|+|+|+
T Consensus 195 ~~~~vGDs 202 (260)
T 2gfh_A 195 DCVMVGDT 202 (260)
T ss_dssp GEEEEESC
T ss_pred hEEEECCC
Confidence 89999995
No 93
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=86.80 E-value=0.17 Score=50.35 Aligned_cols=52 Identities=17% Similarity=0.124 Sum_probs=36.3
Q ss_pred hhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCCCCcH
Q 000959 1143 ILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTD 1197 (1208)
Q Consensus 1143 VL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~~GTe 1197 (1208)
.|.||+|.+ +|.+.......-|-++|.+.|+++.+++.+.|||||+.....+
T Consensus 10 ~F~~v~iyi---ve~kmG~sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~ 61 (133)
T 2dun_A 10 RFPGVAIYL---VEPRMGRSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAE 61 (133)
T ss_dssp SEEEEEEEE---CHHHHCSHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHH
T ss_pred ccCccEEEE---ecCCcCHHHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHH
Confidence 467777765 3333211122346789999999999999999999999654443
No 94
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=86.73 E-value=0.31 Score=48.70 Aligned_cols=86 Identities=14% Similarity=0.005 Sum_probs=58.2
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+ .|.++|+|++...++..+++.+.-.. +|..++++.++.....+.. . ..++.+-..+|.+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~-~-~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPH-P-DLYTFAAQQLGILP 185 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCC-h-HHHHHHHHHcCCCH
Confidence 6789999999999986 59999999999999999999876543 6765456544321011100 0 0112222245666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+|.|+|+..
T Consensus 186 ~~~i~iGD~~~ 196 (259)
T 4eek_A 186 ERCVVIEDSVT 196 (259)
T ss_dssp GGEEEEESSHH
T ss_pred HHEEEEcCCHH
Confidence 78999999974
No 95
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=86.46 E-value=0.33 Score=46.96 Aligned_cols=81 Identities=16% Similarity=0.244 Sum_probs=57.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCc---cccCCCccC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPK---SKDLEGVLG 1048 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~y---vKDLsrVLG 1048 (1208)
+...|++.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|.. +++.++... + .+. ++-+-..+|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~---~---kp~~~~~~~~~~~lg 156 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFDA-IVGSSLDGK---L---STKEDVIRYAMESLN 156 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSS---S---CSHHHHHHHHHHHHT
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-heee-eeccCCCCC---C---CCCHHHHHHHHHHhC
Confidence 56899999999999876 9999999999999999999876543 6664 555443211 1 111 112222356
Q ss_pred CC-CcEEEEcCCCc
Q 000959 1049 ME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD-srVVIIDDrpd 1061 (1208)
.+ ..+|.|+|+..
T Consensus 157 i~~~~~i~iGD~~~ 170 (226)
T 3mc1_A 157 IKSDDAIMIGDREY 170 (226)
T ss_dssp CCGGGEEEEESSHH
T ss_pred cCcccEEEECCCHH
Confidence 66 78999999863
No 96
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=86.37 E-value=0.54 Score=45.91 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=55.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|.|++...|+..+++.++-.. +|.. +++.++.. ..++. + ..++-+-..+|.+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~~~~~~ 168 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDH-LLSVDPVQ-VYKPD-N-RVYELAEQALGLDR 168 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEESGGGT-CCTTS-H-HHHHHHHHHHTSCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhhe-EEEecccC-CCCCC-H-HHHHHHHHHcCCCc
Confidence 46789999999999864 9999999999999999999876543 5654 55444321 11110 0 0011121235665
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|+|+|+.
T Consensus 169 ~~~~~iGD~~ 178 (232)
T 1zrn_A 169 SAILFVASNA 178 (232)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 7899999986
No 97
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=85.88 E-value=0.81 Score=43.70 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=56.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. +.++|+|++.+.++..+++.++-.. +|.. +++.++... .+.. ...++.+-..+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~-~kp~--~~~~~~~~~~~~i~~ 167 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDA-LASAEKLPY-SKPH--PQVYLDCAAKLGVDP 167 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEECTTSSC-CTTS--THHHHHHHHHHTSCG
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcE-EEeccccCC-CCCC--hHHHHHHHHHcCCCH
Confidence 46789999999999865 9999999999999999999876543 5655 444333211 1100 01122222235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.++.|+|+..
T Consensus 168 ~~~i~iGD~~n 178 (226)
T 1te2_A 168 LTCVALEDSVN 178 (226)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEeCCHH
Confidence 78999999874
No 98
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=85.56 E-value=0.6 Score=46.11 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=55.6
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+..+||+.++|+.+.+. |.++|.|++.+.++..+++.++-.. +|.. +++.++.. ..++. . ..++.+-..+|.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~~~~~~ 178 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLDS-CLSADDLK-IYKPD-P-RIYQFACDRLGVNP 178 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTT-CCTTS-H-HHHHHHHHHHTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcCE-EEEccccC-CCCCC-H-HHHHHHHHHcCCCc
Confidence 46779999999999864 9999999999999999999876543 6654 55544321 11110 0 0011111235666
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|.|+|+.
T Consensus 179 ~~~~~iGD~~ 188 (240)
T 2no4_A 179 NEVCFVSSNA 188 (240)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 7899999986
No 99
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=85.27 E-value=1.2 Score=43.01 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=57.4
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCC-CC-CCCCCCCccccCCCccCCC
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD-PF-DGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~-~f-dG~er~~yvKDLsrVLGrD 1050 (1208)
+.++||+.++|+.+.+.|.++|.|++.+.++..+++.+.-.. +|.+.++..++... .. .+. +..+.+=|++ ++..
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~-p~~~~~~l~~-l~~~ 144 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQ-KDPKRQSVIA-FKSL 144 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCS-SSHHHHHHHH-HHHT
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCC-CchHHHHHHH-HHhc
Confidence 567999999999998779999999999999999999987664 78555654332210 00 010 1112222332 3333
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
..+++|+|+..
T Consensus 145 ~~~~~~iGD~~~ 156 (206)
T 1rku_A 145 YYRVIAAGDSYN 156 (206)
T ss_dssp TCEEEEEECSST
T ss_pred CCEEEEEeCChh
Confidence 67999999864
No 100
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=85.01 E-value=0.4 Score=44.65 Aligned_cols=46 Identities=22% Similarity=0.348 Sum_probs=35.5
Q ss_pred hhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCC-CccEEEeCC
Q 000959 1142 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-QVTHVVANS 1193 (1208)
Q Consensus 1142 kVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~-~VTHVVAa~ 1193 (1208)
.+|.||+|.+++=+| ....|.++..+||+.+..+.+. ++||+|+.+
T Consensus 15 diFsg~~~~l~~~v~------~~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~ 61 (88)
T 3pc7_A 15 DIFTGVRLYLPPSTP------DFSRLRRYFVAFDGDLVQEFDMTSATHVLGSR 61 (88)
T ss_dssp CCSTTCEECCCTTST------THHHHHHHHHHTTCEECCGGGGGGCSEEESCC
T ss_pred hhhcCeEEEccCCcC------chhhheeeeeecCCEEecccCCCcCeEEecCC
Confidence 368899987765333 2246778899999999988885 899999865
No 101
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=84.94 E-value=0.53 Score=46.19 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=57.1
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +|.. +++.+ . ..++. +..+.+=++ .+|.+ +
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~--~-~~Kp~-p~~~~~~~~-~lg~~p~ 155 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDG-IYGSS--P-EAPHK-ADVIHQALQ-THQLAPE 155 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEEC--S-SCCSH-HHHHHHHHH-HTTCCGG
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-heee-eecCC--C-CCCCC-hHHHHHHHH-HcCCCcc
Confidence 567899999999998889999999999999999999886554 6764 55443 1 11110 001122233 35766 7
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+|+|+|+..
T Consensus 156 ~~~~vgDs~~ 165 (210)
T 2ah5_A 156 QAIIIGDTKF 165 (210)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCCHH
Confidence 8999999863
No 102
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.76 E-value=0.7 Score=44.24 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=55.8
Q ss_pred EEeccCHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 973 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk--lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
+...|++.++|+.+.+ .|.++|+|++...++..+++.+.-.. +|.. +++... . ++ ..++-+-..+|.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~k-p---k~----~~~~~~~~~lgi~ 173 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDH-IEVMSD-K---TE----KEYLRLLSILQIA 173 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSE-EEEESC-C---SH----HHHHHHHHHHTCC
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhhe-eeecCC-C---CH----HHHHHHHHHhCCC
Confidence 5779999999999987 69999999999999999999876543 6665 443321 0 11 1122222245766
Q ss_pred -CcEEEEcCCC
Q 000959 1051 -SAVVIIDDSV 1060 (1208)
Q Consensus 1051 -srVVIIDDrp 1060 (1208)
+.+|.|+|+.
T Consensus 174 ~~~~i~iGD~~ 184 (234)
T 3ddh_A 174 PSELLMVGNSF 184 (234)
T ss_dssp GGGEEEEESCC
T ss_pred cceEEEECCCc
Confidence 7899999995
No 103
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=84.74 E-value=1.1 Score=44.81 Aligned_cols=82 Identities=18% Similarity=0.147 Sum_probs=56.4
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+.+.||+.++|+.|.+ .|.+.|.|++.+.++..+++.+.-. +|.. +++.++.. ..++. +..+.+=++ .+|.+
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~-~~~~~~~~-~~Kp~-p~~~~~~~~-~l~~~~ 182 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDF-ALGEKSGI-RRKPA-PDMTSECVK-VLGVPR 182 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSE-EEEECTTS-CCTTS-SHHHHHHHH-HHTCCG
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeE-EEecCCCC-CCCCC-HHHHHHHHH-HcCCCH
Confidence 5678999999999975 5999999999999999999988754 6764 66554322 11110 001111122 35666
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
+.+|+|.|+.
T Consensus 183 ~~~~~vGDs~ 192 (240)
T 2hi0_A 183 DKCVYIGDSE 192 (240)
T ss_dssp GGEEEEESSH
T ss_pred HHeEEEcCCH
Confidence 7899999986
No 104
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=84.42 E-value=0.45 Score=46.13 Aligned_cols=83 Identities=17% Similarity=0.206 Sum_probs=56.7
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-.. +|.. +++.++.. ..++. . ..++-+-..+|.+ +
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~~~~~~~ 173 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFDS-ITTSEEAG-FFKPH-P-RIFELALKKAGVKGE 173 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHT-BCTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hcce-eEeccccC-CCCcC-H-HHHHHHHHHcCCCch
Confidence 567899999999998779999999999999999999876543 5664 55443221 11110 0 0012222235766 7
Q ss_pred cEEEEcCCC
Q 000959 1052 AVVIIDDSV 1060 (1208)
Q Consensus 1052 rVVIIDDrp 1060 (1208)
.++.|+|+.
T Consensus 174 ~~~~vGD~~ 182 (234)
T 3u26_A 174 EAVYVGDNP 182 (234)
T ss_dssp GEEEEESCT
T ss_pred hEEEEcCCc
Confidence 899999996
No 105
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=84.28 E-value=0.76 Score=46.92 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=45.1
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcCCc
Q 000959 921 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 999 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTAGt 999 (1208)
..+++|||+||++... .+.|...+.|+++.+ -+.++|.|.-.
T Consensus 6 kli~~DlDGTLl~~~~-------------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~ 48 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDR-------------------------------------LISTKAIESIRSAEKKGLTVSLLSGNV 48 (227)
T ss_dssp CEEEEEHHHHSBCTTS-------------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEECCCCCcCCCC-------------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4789999999997521 135678888988875 58999999999
Q ss_pred HHHHHHHHHHhcCCC
Q 000959 1000 KLYATEMAKVLDPKG 1014 (1208)
Q Consensus 1000 reYAd~VLdiLDP~g 1014 (1208)
...+..+++.|...+
T Consensus 49 ~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 49 IPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred cHHHHHHHHHhCCCC
Confidence 999999998886554
No 106
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=84.15 E-value=0.97 Score=42.25 Aligned_cols=83 Identities=17% Similarity=0.148 Sum_probs=54.8
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+..+|++.++|+.+.+. +.++|+|++...++. +++.+.-.. +|.. ++..++.. ..+.. ....+.+-..+|.+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~~-~~~~~~~~-~~Kp~--~~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFTE-ILTSQSGF-VRKPS--PEAATYLLDKYQLNS 157 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEEE-EECGGGCC-CCTTS--SHHHHHHHHHHTCCG
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-heee-EEecCcCC-CCCCC--cHHHHHHHHHhCCCc
Confidence 56799999999999875 999999999999999 888886543 5654 44433221 11100 01112222235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.++.|+|+..
T Consensus 158 ~~~~~iGD~~n 168 (207)
T 2go7_A 158 DNTYYIGDRTL 168 (207)
T ss_dssp GGEEEEESSHH
T ss_pred ccEEEECCCHH
Confidence 78999999863
No 107
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=83.33 E-value=1.7 Score=48.33 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=43.5
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcC
Q 000959 919 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 997 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTA 997 (1208)
++..+++|||+||++... .=||+.+||+.|.+ -+.+++.|+
T Consensus 12 ~~~~~l~D~DGvl~~g~~--------------------------------------~~p~a~~~l~~l~~~g~~~~~vTN 53 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGKK--------------------------------------PIAGASDALKLLNRNKIPYILLTN 53 (352)
T ss_dssp CCEEEEECCBTTTEETTE--------------------------------------ECTTHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEEECCCeeEcCCe--------------------------------------eCcCHHHHHHHHHHCCCEEEEEeC
Confidence 688999999999997631 12899999999874 588999998
Q ss_pred Cc----HHHHHHHHHHhc
Q 000959 998 GN----KLYATEMAKVLD 1011 (1208)
Q Consensus 998 Gt----reYAd~VLdiLD 1011 (1208)
+. +.||+.+.+.|.
T Consensus 54 n~~~~~~~~~~~l~~~lg 71 (352)
T 3kc2_A 54 GGGFSERARTEFISSKLD 71 (352)
T ss_dssp CCSSCHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHhcC
Confidence 75 788888876543
No 108
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=83.17 E-value=0.75 Score=45.29 Aligned_cols=81 Identities=16% Similarity=0.172 Sum_probs=56.7
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCcc---ccCCCccC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKS---KDLEGVLG 1048 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yv---KDLsrVLG 1048 (1208)
+..+|++.++|+.+.+. |.++|+|++.+.++..+++.++-.. +|.. +++.++... .+ +.. +-+-..+|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~k-----p~~~~~~~~~~~~g 180 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFKY-IAGSNLDGT-RV-----NKNEVIQYVLDLCN 180 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSC-CC-----CHHHHHHHHHHHHT
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEEE-EEeccccCC-CC-----CCHHHHHHHHHHcC
Confidence 57899999999999876 9999999999999999999886554 6765 555443321 11 111 11111345
Q ss_pred CC--CcEEEEcCCCc
Q 000959 1049 ME--SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD--srVVIIDDrpd 1061 (1208)
.+ +.+|.|+|+..
T Consensus 181 ~~~~~~~i~vGD~~~ 195 (240)
T 3sd7_A 181 VKDKDKVIMVGDRKY 195 (240)
T ss_dssp CCCGGGEEEEESSHH
T ss_pred CCCCCcEEEECCCHH
Confidence 43 68999999863
No 109
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=82.82 E-value=0.85 Score=45.79 Aligned_cols=82 Identities=16% Similarity=0.149 Sum_probs=55.7
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+.+.|++.++|+.+. .|.++|.|++.+.++..+++.++-.. +|.. +++.++... .++. + ..++.+-..+|.+ +
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~~ 165 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFDA-VISVDAKRV-FKPH-P-DSYALVEEVLGVTPA 165 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTS-H-HHHHHHHHHHCCCGG
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hccE-EEEccccCC-CCCC-H-HHHHHHHHHcCCCHH
Confidence 467899999999999 99999999999999999999876443 6754 555443221 1110 0 0111121235665 7
Q ss_pred cEEEEcCCC
Q 000959 1052 AVVIIDDSV 1060 (1208)
Q Consensus 1052 rVVIIDDrp 1060 (1208)
.+|+|+|+.
T Consensus 166 ~~~~vGD~~ 174 (253)
T 1qq5_A 166 EVLFVSSNG 174 (253)
T ss_dssp GEEEEESCH
T ss_pred HEEEEeCCh
Confidence 899999986
No 110
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=82.31 E-value=0.8 Score=47.52 Aligned_cols=83 Identities=11% Similarity=0.114 Sum_probs=56.2
Q ss_pred EEeccCHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHhcC--CCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCC
Q 000959 973 TKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDP--KGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 1049 (1208)
Q Consensus 973 VKLRPGLdEFLeeLS-klYEIVIYTAGtreYAd~VLdiLDP--~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGr 1049 (1208)
+.+.||+.++|+.|. .-|.++|+|++.+.++..+++.++- =..+|.. +++. +.. .+.+ +..|.+=++ .+|.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~-i~~~-~~~--~KP~-p~~~~~~~~-~lg~ 202 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG-HFDT-KIG--HKVE-SESYRKIAD-SIGC 202 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE-EECG-GGC--CTTC-HHHHHHHHH-HHTS
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE-EEec-CCC--CCCC-HHHHHHHHH-HhCc
Confidence 678999999999996 4699999999999999999986541 1246764 6654 322 1210 011222233 3566
Q ss_pred C-CcEEEEcCCCc
Q 000959 1050 E-SAVVIIDDSVR 1061 (1208)
Q Consensus 1050 D-srVVIIDDrpd 1061 (1208)
. +.+|+|+|+..
T Consensus 203 ~p~~~l~VgDs~~ 215 (261)
T 1yns_A 203 STNNILFLTDVTR 215 (261)
T ss_dssp CGGGEEEEESCHH
T ss_pred CcccEEEEcCCHH
Confidence 5 78999999953
No 111
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=81.89 E-value=0.42 Score=46.04 Aligned_cols=85 Identities=12% Similarity=0.181 Sum_probs=55.4
Q ss_pred EEEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHH------hcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCC
Q 000959 972 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKV------LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 1045 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdi------LDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsr 1045 (1208)
++...|++.++|+.+.+.|.++|.|++...++..+++. +.-. .+|.. +++.+++. ..++. . ..++.+-.
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDK-VYASCQMG-KYKPN-E-DIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSE-EEEHHHHT-CCTTS-H-HHHHHHHH
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCe-EEeecccC-CCCCC-H-HHHHHHHH
Confidence 46789999999999988899999999999998888876 3322 35654 44433221 11110 0 01111212
Q ss_pred ccCCC-CcEEEEcCCCc
Q 000959 1046 VLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1046 VLGrD-srVVIIDDrpd 1061 (1208)
.+|.+ ..+|.|+|+..
T Consensus 162 ~~~~~~~~~~~igD~~~ 178 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPA 178 (211)
T ss_dssp HHCCCGGGEEEECSCHH
T ss_pred HhCCChHHeEEeCCCHH
Confidence 35666 78999999875
No 112
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=81.88 E-value=0.2 Score=52.62 Aligned_cols=65 Identities=12% Similarity=0.018 Sum_probs=43.3
Q ss_pred HhhhcCceEE-eeeeccC-CCCCCCCchHHHHHHhcCCEEecccCCC-----ccEEEeCCCCcHHHHHHHHhc
Q 000959 1141 RKILAGCRIV-FSRVFPV-GEANPHLHPLWQTAEQFGAVCTKHIDDQ-----VTHVVANSLGTDKVLLVVFSL 1206 (1208)
Q Consensus 1141 rkVL~GC~IV-FSGVfPl-g~anPe~h~LWrLAEsFGAtct~sId~~-----VTHVVAa~~GTeKVr~A~~~g 1206 (1208)
.++|+||.|+ ++|.+.. .........|.+++++|||+++...... +||+||.+ .|.|++.+...|
T Consensus 3 s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~-~t~k~~~~~~~~ 74 (264)
T 1z56_C 3 SNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK-TTTECKALIDRG 74 (264)
T ss_dssp CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS-CCGGGGGGTTTT
T ss_pred cccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEecC-CcHHHHHHHhCC
Confidence 4689999994 5776521 1011234678999999999887654433 47788865 577887766554
No 113
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=81.75 E-value=1.8 Score=43.76 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=40.9
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh-cccEEEEEcCCc
Q 000959 921 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGN 999 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS-klYEIVIYTAGt 999 (1208)
..+++|||+||+++.. . +.|...+.|+++. +-..++|.|.-.
T Consensus 4 kli~~DlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~v~i~TGR~ 46 (231)
T 1wr8_A 4 KAISIDIDGTITYPNR--M-----------------------------------IHEKALEAIRRAESLGIPIMLVTGNT 46 (231)
T ss_dssp CEEEEESTTTTBCTTS--C-----------------------------------BCHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred eEEEEECCCCCCCCCC--c-----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3689999999998641 0 2345666777764 457788888888
Q ss_pred HHHHHHHHHHhcCCC
Q 000959 1000 KLYATEMAKVLDPKG 1014 (1208)
Q Consensus 1000 reYAd~VLdiLDP~g 1014 (1208)
...+..+++.|....
T Consensus 47 ~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 47 VQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred hhHHHHHHHHcCCCC
Confidence 888888888776543
No 114
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=81.04 E-value=0.99 Score=43.51 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=55.0
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCcccc---CCCccCC
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKD---LEGVLGM 1049 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKD---LsrVLGr 1049 (1208)
+...|++.++|+.+.+.|.++|.|++.+.++..+++.|. .+|.. +++.++.. ..+.. +..+.+= +. .+|.
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~-i~~~~~~~-~~KP~-~~~~~~~l~~~~-~lgi 170 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDH-IITAQDVG-SYKPN-PNNFTYMIDALA-KAGI 170 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSE-EEEHHHHT-SCTTS-HHHHHHHHHHHH-HTTC
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCE-EEEccccC-CCCCC-HHHHHHHHHHHH-hcCC
Confidence 467899999999998889999999999999999888764 46764 55444321 11110 0000011 33 3576
Q ss_pred C-CcEEEEcCCC
Q 000959 1050 E-SAVVIIDDSV 1060 (1208)
Q Consensus 1050 D-srVVIIDDrp 1060 (1208)
+ +.+|.|+|+.
T Consensus 171 ~~~~~~~vGD~~ 182 (240)
T 3smv_A 171 EKKDILHTAESL 182 (240)
T ss_dssp CGGGEEEEESCT
T ss_pred CchhEEEECCCc
Confidence 6 7899999985
No 115
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=80.92 E-value=2.2 Score=44.47 Aligned_cols=59 Identities=24% Similarity=0.233 Sum_probs=42.0
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcC
Q 000959 919 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 997 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTA 997 (1208)
+...+++|||+||++.... .-|...+.|+++.+ -..++|-|.
T Consensus 8 ~~~li~~DlDGTLl~~~~~-------------------------------------~~~~~~~~l~~l~~~G~~~~iaTG 50 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSY-------------------------------------DWQPAAPWLTRLREANVPVILCSS 50 (275)
T ss_dssp CCEEEEEECTTTTSCSSCC-------------------------------------SCCTTHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeCCCCCCCCCCc-------------------------------------CCHHHHHHHHHHHHCCCeEEEEcC
Confidence 4568999999999975310 01345677777764 588889998
Q ss_pred CcHHHHHHHHHHhcCCC
Q 000959 998 GNKLYATEMAKVLDPKG 1014 (1208)
Q Consensus 998 GtreYAd~VLdiLDP~g 1014 (1208)
-....+..+++.|...+
T Consensus 51 R~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 51 KTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp SCHHHHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHHcCCCC
Confidence 88888888888775443
No 116
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=80.12 E-value=2.4 Score=41.77 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred EEEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 972 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
.+.+.||+.++|+++.+. |.++|.|++.+ ++..+++.++-.. +|.. +++.++.. ..++. +..+.+=++ .+|.+
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~~-~~~~~~~~-~~Kp~-~~~~~~~~~-~~~~~ 166 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFDA-LALSYEIK-AVKPN-PKIFGFALA-KVGYP 166 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCSE-EC-------------CCHHHHHHH-HHCSS
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-HeeE-EEeccccC-CCCCC-HHHHHHHHH-HcCCC
Confidence 478899999999999875 99999999977 6888888876543 6764 55444322 11110 001111122 23444
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
. |+|+|++.
T Consensus 167 ~--~~vgD~~~ 175 (220)
T 2zg6_A 167 A--VHVGDIYE 175 (220)
T ss_dssp E--EEEESSCC
T ss_pred e--EEEcCCch
Confidence 4 89999875
No 117
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=79.77 E-value=2 Score=40.94 Aligned_cols=84 Identities=18% Similarity=0.092 Sum_probs=55.3
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+ .+.++|+|++...|+..+++.++-.. +|.. +++.++.. ..++. . ..++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~-~~k~~-~-~~~~~~~~~~~~~~ 162 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFDI-IIGGEDVT-HHKPD-P-EGLLLAIDRLKACP 162 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCSE-EECGGGCS-SCTTS-T-HHHHHHHHHTTCCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-heee-eeehhhcC-CCCCC-h-HHHHHHHHHhCCCh
Confidence 4578999999999975 59999999999999999998876543 5654 45433221 11100 0 0112222245666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+|.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (225)
T 3d6j_A 163 EEVLYIGDSTV 173 (225)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 78999999863
No 118
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=79.39 E-value=1.3 Score=44.19 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=54.6
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+...|.+.|+|++...++..+++.+.-.. +|.. ++.... . ++ ..++-+-..+|.+ +
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-i~~~~k-p---~~----~~~~~~~~~l~~~~~ 180 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFPR-IEVVSE-K---DP----QTYARVLSEFDLPAE 180 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCCC-EEEESC-C---SH----HHHHHHHHHHTCCGG
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCce-eeeeCC-C---CH----HHHHHHHHHhCcCch
Confidence 567899999999998779999999999999999998876543 5654 443221 0 00 1112221235666 7
Q ss_pred cEEEEcCCC
Q 000959 1052 AVVIIDDSV 1060 (1208)
Q Consensus 1052 rVVIIDDrp 1060 (1208)
.+|.|.|+.
T Consensus 181 ~~i~iGD~~ 189 (251)
T 2pke_A 181 RFVMIGNSL 189 (251)
T ss_dssp GEEEEESCC
T ss_pred hEEEECCCc
Confidence 899999997
No 119
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=79.34 E-value=1.1 Score=42.38 Aligned_cols=62 Identities=23% Similarity=0.139 Sum_probs=41.1
Q ss_pred EEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh-cccEEEEEcCCcH
Q 000959 922 CLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGNK 1000 (1208)
Q Consensus 922 TLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS-klYEIVIYTAGtr 1000 (1208)
.+++|||+||+++... + + . -+.+.|+..+.|+++. +-+.++|.|.-..
T Consensus 3 ~i~~DlDGTL~~~~~~----~----~-------------------~----~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTS----D----Y-------------------R----NVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp EEEECSTTTTBCCCCS----C----G-------------------G----GCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred EEEEecCCCCCCCCCC----c----c-------------------c----cCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 5889999999976420 0 0 0 0124577888888876 4588888886543
Q ss_pred HH------------HHHHHHHhcCCC
Q 000959 1001 LY------------ATEMAKVLDPKG 1014 (1208)
Q Consensus 1001 eY------------Ad~VLdiLDP~g 1014 (1208)
.. +..|++++...+
T Consensus 52 ~~~nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 52 RTYEGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp TTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred hhccccccccCHHHHHHHHHHHHHcC
Confidence 22 567777776655
No 120
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=78.74 E-value=0.99 Score=44.44 Aligned_cols=82 Identities=10% Similarity=0.074 Sum_probs=55.1
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-. |.. +++.++... .++. . ..++-+-..+|.+ +
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 191 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLFGH-YKPD-P-QVYLGACRLLDLPPQ 191 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHHTC-CTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeeccccc-CCCC-H-HHHHHHHHHcCCChH
Confidence 46789999999999988999999999999999999988643 653 444432111 1100 0 0111222245766 7
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+|.|+|+..
T Consensus 192 ~~~~iGD~~~ 201 (254)
T 3umc_A 192 EVMLCAAHNY 201 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEcCchH
Confidence 8999999853
No 121
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=78.62 E-value=1.3 Score=42.69 Aligned_cols=81 Identities=6% Similarity=0.021 Sum_probs=54.0
Q ss_pred eccCHHHHHHHhhcc-cEEEEEcCCc---HHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 975 LRPGIWTFLERASKL-FEMHLYTMGN---KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 975 LRPGLdEFLeeLSkl-YEIVIYTAGt---reYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
..|++.++|+.+.+. |.++|+|++. +.++..+++.++-.. +|.. ++..++.. ..++. . ..++-+-..+|.+
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~lgi~ 174 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FIDK-TFFADEVL-SYKPR-K-EMFEKVLNSFEVK 174 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHT-CCTTC-H-HHHHHHHHHTTCC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hhhh-heeccccC-CCCCC-H-HHHHHHHHHcCCC
Confidence 489999999999875 9999999999 999999998876543 6654 44433221 11110 0 0111122235766
Q ss_pred -CcEEEEcCCC
Q 000959 1051 -SAVVIIDDSV 1060 (1208)
Q Consensus 1051 -srVVIIDDrp 1060 (1208)
+.++.|+|+.
T Consensus 175 ~~~~~~iGD~~ 185 (235)
T 2om6_A 175 PEESLHIGDTY 185 (235)
T ss_dssp GGGEEEEESCT
T ss_pred ccceEEECCCh
Confidence 7899999997
No 122
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=78.52 E-value=2.5 Score=43.08 Aligned_cols=57 Identities=19% Similarity=0.134 Sum_probs=31.8
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh-cccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS-klYEIVIYTAG 998 (1208)
.+.+++|||+||+.+... +-|...+.|+++. +-..++|.|.-
T Consensus 5 ~kli~~DlDGTLl~~~~~-------------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKNE-------------------------------------LAQATIDAVQAAKAQGIKVVLCTGR 47 (279)
T ss_dssp CCEEEECC------------------------------------------------CHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEEEcCcCCCCCCCCc-------------------------------------CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 356899999999987420 1234455666654 45788888877
Q ss_pred cHHHHHHHHHHhcCC
Q 000959 999 NKLYATEMAKVLDPK 1013 (1208)
Q Consensus 999 treYAd~VLdiLDP~ 1013 (1208)
...-+..+++.|+..
T Consensus 48 ~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 48 PLTGVQPYLDAMDID 62 (279)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 777777788777654
No 123
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=78.34 E-value=0.89 Score=43.79 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=54.8
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCCCc
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA 1052 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrDsr 1052 (1208)
+.+.||+.+ |+.+.+.|.++|.|++.+.++..+++.+.-.. +|.. +++.+++. ..++. ...+.+=+. .+| ...
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~~~~~~~~~-~~~-~~~ 145 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFKG-IFSAESVK-EYKPS-PKVYKYFLD-SIG-AKE 145 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGT-CCTTC-HHHHHHHHH-HHT-CSC
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCcE-EEehhhcC-CCCCC-HHHHHHHHH-hcC-CCc
Confidence 467899999 99997559999999999999999999876543 6654 56544322 11110 001111122 356 678
Q ss_pred EEEEcCCCc
Q 000959 1053 VVIIDDSVR 1061 (1208)
Q Consensus 1053 VVIIDDrpd 1061 (1208)
+|+|+|+..
T Consensus 146 ~~~vGD~~~ 154 (201)
T 2w43_A 146 AFLVSSNAF 154 (201)
T ss_dssp CEEEESCHH
T ss_pred EEEEeCCHH
Confidence 999999874
No 124
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=77.57 E-value=2.4 Score=42.55 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=34.1
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHh
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVL 1010 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiL 1010 (1208)
+.++||+.+||+.+.+ .|.++|.|++.+.++..+++-|
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC
Confidence 6789999999999986 5999999999999999988844
No 125
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=77.05 E-value=3.9 Score=41.95 Aligned_cols=54 Identities=30% Similarity=0.269 Sum_probs=36.2
Q ss_pred Hhhhc-CceEEeeeeccCCCCCCC-C-------chHHHHHHhcCCEEecccCCCccEEEeCCCC
Q 000959 1141 RKILA-GCRIVFSRVFPVGEANPH-L-------HPLWQTAEQFGAVCTKHIDDQVTHVVANSLG 1195 (1208)
Q Consensus 1141 rkVL~-GC~IVFSGVfPlg~anPe-~-------h~LWrLAEsFGAtct~sId~~VTHVVAa~~G 1195 (1208)
+++|. +++|+|-.+-+. ..+.. . ..+.+-...+||.++.=++..|||||+.+.-
T Consensus 56 Rkifk~~~vfYFDt~~~~-~~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i 118 (160)
T 3qbz_A 56 KKIMKRDSRIYFDITDDV-EMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSV 118 (160)
T ss_dssp HHHHHHHCEEEECCCCSS-CCCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCS
T ss_pred HHhCccCcEEEecCCChh-hhhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcC
Confidence 46887 899999764221 11100 0 0122345699999999999999999999843
No 126
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=76.73 E-value=0.98 Score=43.18 Aligned_cols=84 Identities=10% Similarity=0.160 Sum_probs=54.7
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
....|++.++|+.+.+...++|.|++.+.++..+++.+.-.. +|.. ++..++... .+.. ...+.+=+. .+|.+ +
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~ 159 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FLLA-FFTSSALGV-MKPN-PAMYRLGLT-LAQVRPE 159 (200)
T ss_dssp CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TCSC-EEEHHHHSC-CTTC-HHHHHHHHH-HHTCCGG
T ss_pred CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hcce-EEeecccCC-CCCC-HHHHHHHHH-HcCCCHH
Confidence 347899999999998766999999999999999999875433 5654 444332211 1110 001111122 35665 7
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+|+|+|+..
T Consensus 160 ~~~~vgD~~~ 169 (200)
T 3cnh_A 160 EAVMVDDRLQ 169 (200)
T ss_dssp GEEEEESCHH
T ss_pred HeEEeCCCHH
Confidence 8999999874
No 127
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=76.64 E-value=1.3 Score=43.75 Aligned_cols=84 Identities=14% Similarity=0.125 Sum_probs=55.3
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceee-eeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs-~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
+...|++.++|+.+.+. |.++|+|++...++..+++. .-. .+|. +.+++.++.. ..++. . ..++-+-..+|.+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~d~i~~~~~~~-~~kp~-~-~~~~~~~~~lg~~ 182 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP-GMFHKELMVTAFDVK-YGKPN-P-EPYLMALKKGGLK 182 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST-TTCCGGGEECTTTCS-SCTTS-S-HHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH-HhcCcceEEeHHhCC-CCCCC-h-HHHHHHHHHcCCC
Confidence 56889999999999875 99999999999998888876 433 3672 2356544321 11110 0 0111222245766
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
..+|.|+|+..
T Consensus 183 ~~~~i~vGD~~~ 194 (243)
T 3qxg_A 183 ADEAVVIENAPL 194 (243)
T ss_dssp GGGEEEEECSHH
T ss_pred HHHeEEEeCCHH
Confidence 78999999973
No 128
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=76.64 E-value=3.6 Score=39.79 Aligned_cols=82 Identities=20% Similarity=0.126 Sum_probs=55.9
Q ss_pred EEeccCHHHHHHHhhcc--cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCc---cccCCCcc
Q 000959 973 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPK---SKDLEGVL 1047 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl--YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~y---vKDLsrVL 1047 (1208)
+...|++.++|+.+.+. +.+.|+|++.+.++..+++.+.-.. +|.. ++..++... .+ .+. ++-+-..+
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~--~~---k~~~~~~~~~~~~l 164 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPF-GAFADDALD--RN---ELPHIALERARRMT 164 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSC-EECTTTCSS--GG---GHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCc-ceecCCCcC--cc---chHHHHHHHHHHHh
Confidence 67899999999999986 9999999999999999999887654 6664 333222110 00 000 11111235
Q ss_pred C--CC-CcEEEEcCCCc
Q 000959 1048 G--ME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1048 G--rD-srVVIIDDrpd 1061 (1208)
| .+ +.++.|+|+..
T Consensus 165 g~~~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 165 GANYSPSQIVIIGDTEH 181 (234)
T ss_dssp CCCCCGGGEEEEESSHH
T ss_pred CCCCCcccEEEECCCHH
Confidence 7 55 78999999974
No 129
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=76.55 E-value=2.6 Score=43.00 Aligned_cols=56 Identities=29% Similarity=0.193 Sum_probs=38.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh-cccEEEEEcCC
Q 000959 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 998 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS-klYEIVIYTAG 998 (1208)
.+.+++|||+||+.+.. . +-|...+.|+++. +-+.++|.|.-
T Consensus 5 ~kli~fDlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKK--E-----------------------------------ISSRNRETLIRIQEQGIRLVLASGR 47 (279)
T ss_dssp CCEEEECCCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEeCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45799999999997742 0 1244556666654 45788888877
Q ss_pred cHHHHHHHHHHhcC
Q 000959 999 NKLYATEMAKVLDP 1012 (1208)
Q Consensus 999 treYAd~VLdiLDP 1012 (1208)
...-+..+++.|..
T Consensus 48 ~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 48 PTYGIVPLANELRM 61 (279)
T ss_dssp CHHHHHHHHHHTTG
T ss_pred ChHHHHHHHHHhCC
Confidence 77777777776653
No 130
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=76.48 E-value=2.7 Score=43.75 Aligned_cols=56 Identities=25% Similarity=0.194 Sum_probs=37.0
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhh-cccEEEEEcCCc
Q 000959 921 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGN 999 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLS-klYEIVIYTAGt 999 (1208)
..+++||||||+.+.. . +.|...+.|+++. +-..+++.|.-.
T Consensus 5 kli~~DlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~ 47 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKH--Q-----------------------------------VSLENENALRQAQRDGIEVVVSTGRA 47 (288)
T ss_dssp CEEEEECCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEeCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999998742 0 1234455666654 346777888777
Q ss_pred HHHHHHHHHHhcCC
Q 000959 1000 KLYATEMAKVLDPK 1013 (1208)
Q Consensus 1000 reYAd~VLdiLDP~ 1013 (1208)
...+..+++.|...
T Consensus 48 ~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 48 HFDVMSIFEPLGIK 61 (288)
T ss_dssp HHHHHHHHGGGTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 77777777666443
No 131
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=76.27 E-value=2.3 Score=44.08 Aligned_cols=67 Identities=13% Similarity=0.097 Sum_probs=37.2
Q ss_pred HHHHHHHhhhcCceEEeee-----eccCCCCCCCCchHHHHHHhcCCEEec------ccC-----CCccEEEeCCCCcHH
Q 000959 1135 ILAAEQRKILAGCRIVFSR-----VFPVGEANPHLHPLWQTAEQFGAVCTK------HID-----DQVTHVVANSLGTDK 1198 (1208)
Q Consensus 1135 ILreiRrkVL~GC~IVFSG-----VfPlg~anPe~h~LWrLAEsFGAtct~------sId-----~~VTHVVAa~~GTeK 1198 (1208)
+...++...-..+.+++|+ +.|.+. .+...+.++++.+|..... +.. ..+-+-||-.++.+.
T Consensus 179 ~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~--~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~ 256 (285)
T 3pgv_A 179 LEQAMNARWGDRVNVSFSTLTCLEVMAGGV--SKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR 256 (285)
T ss_dssp HHHHHHHHHGGGEEEEESSTTEEEEEETTC--SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH
T ss_pred HHHHHHHHhcCCEEEEEeCCceEEEecCCC--ChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH
Confidence 3333433333345666664 445432 2235677888888863211 111 235678888888888
Q ss_pred HHHHH
Q 000959 1199 VLLVV 1203 (1208)
Q Consensus 1199 Vr~A~ 1203 (1208)
++.+.
T Consensus 257 vk~~A 261 (285)
T 3pgv_A 257 LKDLH 261 (285)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 87764
No 132
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=76.19 E-value=3.1 Score=42.68 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHhhhcCceEEeee-----eccCCCCCCCCchHHHHHHhcCCEEecc------cC-----CCccEEEeCC
Q 000959 1130 VDVRNILAAEQRKILAGCRIVFSR-----VFPVGEANPHLHPLWQTAEQFGAVCTKH------ID-----DQVTHVVANS 1193 (1208)
Q Consensus 1130 ~DVR~ILreiRrkVL~GC~IVFSG-----VfPlg~anPe~h~LWrLAEsFGAtct~s------Id-----~~VTHVVAa~ 1193 (1208)
..+..++..+ .....++.+++|+ +.|.+. .+...+..+++.+|.....- .. ..+-|-||-.
T Consensus 168 ~~~~~~~~~l-~~~~~~~~~~~s~~~~~ei~~~~~--~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~ 244 (290)
T 3dnp_A 168 DIQHDITETI-TKAFPAVDVIRVNDEKLNIVPKGV--SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG 244 (290)
T ss_dssp GGHHHHHHHH-HHHCTTEEEEEEETTEEEEEETTC--CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred HHHHHHHHHH-HhhCCcEEEEEeCCCeEEEEECCC--CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec
Confidence 4566677666 5567788888885 455543 23456888899998632211 11 2356777777
Q ss_pred CCcHHHHHH
Q 000959 1194 LGTDKVLLV 1202 (1208)
Q Consensus 1194 ~GTeKVr~A 1202 (1208)
++.+.++.+
T Consensus 245 na~~~~k~~ 253 (290)
T 3dnp_A 245 NAVPEIKRK 253 (290)
T ss_dssp TSCHHHHHH
T ss_pred CCcHHHHHh
Confidence 777777655
No 133
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=76.11 E-value=3.2 Score=40.71 Aligned_cols=48 Identities=15% Similarity=0.009 Sum_probs=40.4
Q ss_pred EeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEE
Q 000959 974 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1022 (1208)
Q Consensus 974 KLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIi 1022 (1208)
.++||+.++|+.+.+ .+.++|.|++.+.++..+++.+.-.. +|..++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~ 140 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPE 140 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceE
Confidence 469999999999975 59999999999999999999987653 5665544
No 134
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=76.09 E-value=0.98 Score=44.07 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=54.5
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+.+.|.++|.|++...++..+++.+.-. |.. +++.++... .+.. . ..++-+-..+|.+ +
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 187 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDV-IIGSDINRK-YKPD-P-QAYLRTAQVLGLHPG 187 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSC-CCCHHHHTC-CTTS-H-HHHHHHHHHTTCCGG
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeE-EEEcCcCCC-CCCC-H-HHHHHHHHHcCCChH
Confidence 46689999999999877999999999999999999988543 543 443332111 1100 0 0112222245766 7
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.++.|+|+..
T Consensus 188 ~~~~iGD~~~ 197 (254)
T 3umg_A 188 EVMLAAAHNG 197 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEeCChH
Confidence 8999999863
No 135
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=75.37 E-value=2 Score=43.95 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 5 ~kli~~DlDGTLl~~~ 20 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCceEeCC
Confidence 4578999999999875
No 136
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=75.12 E-value=3.1 Score=39.10 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=51.2
Q ss_pred eccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCCCcE
Q 000959 975 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 1053 (1208)
Q Consensus 975 LRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrDsrV 1053 (1208)
..|++.++|+.+.+. |.++|+|++. .++..+++.+.-.. +|.. +++.+++.. .++. . ..++.+-..+|.+ .+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~-~~ 155 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTE-VVTSSSGFK-RKPN-P-ESMLYLREKYQIS-SG 155 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEE-EECGGGCCC-CTTS-C-HHHHHHHHHTTCS-SE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-heee-eeeccccCC-CCCC-H-HHHHHHHHHcCCC-eE
Confidence 789999999999865 9999999886 57888888776543 5654 554433211 1100 0 1112222235666 89
Q ss_pred EEEcCCCc
Q 000959 1054 VIIDDSVR 1061 (1208)
Q Consensus 1054 VIIDDrpd 1061 (1208)
+.|+|+..
T Consensus 156 ~~iGD~~~ 163 (190)
T 2fi1_A 156 LVIGDRPI 163 (190)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999863
No 137
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=74.48 E-value=3.5 Score=42.54 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=37.4
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhcccEEEEEcCCcH
Q 000959 921 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNK 1000 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSklYEIVIYTAGtr 1000 (1208)
+.+++|||+||+++.. .+ -|...+.|++..+-..++|.|.-..
T Consensus 3 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~~~~Gi~v~iaTGR~~ 45 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNL--EI-----------------------------------SEKDRRNIEKLSRKCYVVFASGRML 45 (268)
T ss_dssp CEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHTTTSEEEEECSSCH
T ss_pred cEEEEeCCCcCCCCCC--cc-----------------------------------CHHHHHHHHHHhCCCEEEEECCCCh
Confidence 3689999999998642 11 2334455555234577778887777
Q ss_pred HHHHHHHHHhcCCC
Q 000959 1001 LYATEMAKVLDPKG 1014 (1208)
Q Consensus 1001 eYAd~VLdiLDP~g 1014 (1208)
..+..+++.|...+
T Consensus 46 ~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 46 VSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHHhCCCC
Confidence 77777777776543
No 138
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=73.79 E-value=3 Score=42.70 Aligned_cols=15 Identities=20% Similarity=0.565 Sum_probs=12.7
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++|||+||++..
T Consensus 2 k~i~~D~DGtL~~~~ 16 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN 16 (263)
T ss_dssp EEEEEECBTTTEETT
T ss_pred eEEEEeCcCceEeCC
Confidence 368999999999864
No 139
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=73.61 E-value=5.4 Score=40.41 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.4
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 8 ~kli~~DlDGTLl~~~ 23 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV 23 (268)
T ss_dssp CSEEEEECBTTTEETT
T ss_pred CCEEEEcCcCcEECCC
Confidence 4578999999999864
No 140
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=72.83 E-value=1.3 Score=49.94 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=43.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceee-eeEEecC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRG 1025 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs-~RIiSRD 1025 (1208)
+.+.||+.++|+.|.+. |.+.|.|++.+.++..+++.++-.. +|. +.|++.+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~d 267 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATAS 267 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecc
Confidence 56789999999999875 9999999999999999999886543 676 2577644
No 141
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=72.35 E-value=2.5 Score=42.87 Aligned_cols=15 Identities=33% Similarity=0.538 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++|||+||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQ 18 (258)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred eEEEEeCCCCCcCCC
Confidence 468999999999875
No 142
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=72.06 E-value=3.4 Score=42.68 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=13.7
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
+.+.+++||||||+++.
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 45779999999999763
No 143
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=71.69 E-value=2.9 Score=42.85 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=23.1
Q ss_pred HHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhc
Q 000959 979 IWTFLERASKLFEMHLYTMGNKLYATEMAKVLD 1011 (1208)
Q Consensus 979 LdEFLeeLSklYEIVIYTAGtreYAd~VLdiLD 1011 (1208)
..+.|+++.+...++|-|--....+..+++.|.
T Consensus 24 ~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~ 56 (244)
T 1s2o_A 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVG 56 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 345666666667888888777777777777654
No 144
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=71.16 E-value=7.1 Score=40.84 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=50.5
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCCC
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMES 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrDs 1051 (1208)
..++||+.++|+.|.+ -+.++|.|++.+.++..+++.+.-.. +|.. ++ +. .+.+-+++ ++...
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~----------~~---~K~~~~~~-l~~~~ 225 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VIAE-VL----------PH---QKSEEVKK-LQAKE 225 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CC----------TT---CHHHHHHH-HTTTC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-eeee-cC----------hH---HHHHHHHH-HhcCC
Confidence 4579999999999986 49999999999999999999886432 3432 11 00 12222332 23226
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+++|.|+..
T Consensus 226 ~~~~vGDs~~ 235 (287)
T 3a1c_A 226 VVAFVGDGIN 235 (287)
T ss_dssp CEEEEECTTT
T ss_pred eEEEEECCHH
Confidence 7999999863
No 145
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=70.88 E-value=2.5 Score=41.10 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=49.5
Q ss_pred eccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-Cc
Q 000959 975 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 1052 (1208)
Q Consensus 975 LRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-sr 1052 (1208)
+.||+.++|+.+.+. |.++|+|++.. +..+++.+.-.. +|.. +++.++... .++. . ..++-+-..+|.+ +.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~-~~~~~~~~~lgi~~~~ 165 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFHA-IVDPTTLAK-GKPD-P-DIFLTAAAMLDVSPAD 165 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCSE-ECCC-----------C-CHHHHHHHHHTSCGGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcCE-EeeHhhCCC-CCCC-h-HHHHHHHHHcCCCHHH
Confidence 689999999999876 99999999855 777888776544 5654 454433211 1100 0 0112222235766 78
Q ss_pred EEEEcCCC
Q 000959 1053 VVIIDDSV 1060 (1208)
Q Consensus 1053 VVIIDDrp 1060 (1208)
+|+|+|+.
T Consensus 166 ~i~vGDs~ 173 (233)
T 3nas_A 166 CAAIEDAE 173 (233)
T ss_dssp EEEEECSH
T ss_pred EEEEeCCH
Confidence 99999986
No 146
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=70.62 E-value=3.5 Score=42.73 Aligned_cols=68 Identities=9% Similarity=-0.029 Sum_probs=36.7
Q ss_pred HHHHHHHHHhhhcCceEEeee-----eccCCCCCCCCchHHHHHHhcCCEEeccc------C-----CCccEEEeCCCCc
Q 000959 1133 RNILAAEQRKILAGCRIVFSR-----VFPVGEANPHLHPLWQTAEQFGAVCTKHI------D-----DQVTHVVANSLGT 1196 (1208)
Q Consensus 1133 R~ILreiRrkVL~GC~IVFSG-----VfPlg~anPe~h~LWrLAEsFGAtct~sI------d-----~~VTHVVAa~~GT 1196 (1208)
..++..++...-..+.+++|+ +.|.+. .+...+.++++.+|.....-+ . ..+-+-||-.++.
T Consensus 179 ~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~--~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~ 256 (283)
T 3dao_A 179 ELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGV--SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNAR 256 (283)
T ss_dssp HHHTTTHHHHHTTTEEEEEETTTEEEEEETTC--CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSC
T ss_pred HHHHHHHHHHhcCCEEEEEecCceEEEeeCCC--cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCC
Confidence 333444444333456677765 334432 223467788888886321111 1 1255777777777
Q ss_pred HHHHHH
Q 000959 1197 DKVLLV 1202 (1208)
Q Consensus 1197 eKVr~A 1202 (1208)
+.++.+
T Consensus 257 ~~~k~~ 262 (283)
T 3dao_A 257 QEVIAA 262 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777654
No 147
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=70.40 E-value=2.8 Score=43.70 Aligned_cols=15 Identities=33% Similarity=0.456 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++|||+||+.+.
T Consensus 6 kli~~DlDGTLl~~~ 20 (282)
T 1rkq_A 6 KLIAIDMDGTLLLPD 20 (282)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred eEEEEeCCCCCCCCC
Confidence 479999999999764
No 148
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=70.04 E-value=5.2 Score=41.02 Aligned_cols=83 Identities=19% Similarity=0.124 Sum_probs=55.6
Q ss_pred EEeccCHHHHHHHhhcc--cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCC-
Q 000959 973 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM- 1049 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl--YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGr- 1049 (1208)
+...|++.++|+.+.+. +.+.|+|++.+.++..+++.++-. .|.. +++.++... .+.. . ..++.+-..+|.
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~-i~~~~~~~~-~kp~-~-~~~~~~~~~lgi~ 186 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEY-FITANDVKQ-GKPH-P-EPYLKGRNGLGFP 186 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSS-EECGGGCSS-CTTS-S-HHHHHHHHHTTCC
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCE-EEEcccCCC-CCCC-h-HHHHHHHHHcCCC
Confidence 56789999999999875 999999999999999999988654 2543 555443211 1100 0 011222223566
Q ss_pred ------C-CcEEEEcCCCc
Q 000959 1050 ------E-SAVVIIDDSVR 1061 (1208)
Q Consensus 1050 ------D-srVVIIDDrpd 1061 (1208)
+ +.++.|.|+..
T Consensus 187 ~~~~~~~~~~~i~~GDs~n 205 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPA 205 (275)
T ss_dssp CCSSCGGGSCEEEEESSHH
T ss_pred ccccCCCcceEEEEeCCHH
Confidence 6 78999999873
No 149
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=69.76 E-value=6.7 Score=39.67 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=14.1
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
+..++++|||+||+.+.
T Consensus 16 ~~~~v~~DlDGTLl~~~ 32 (271)
T 1vjr_A 16 KIELFILDMDGTFYLDD 32 (271)
T ss_dssp GCCEEEECCBTTTEETT
T ss_pred CCCEEEEcCcCcEEeCC
Confidence 34579999999999874
No 150
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=69.75 E-value=4 Score=40.56 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=12.3
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
-..+++|||+||+++.
T Consensus 7 ik~i~fDlDGTLld~~ 22 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIED 22 (259)
T ss_dssp CCEEEEESSSSSCC--
T ss_pred CCEEEEeCcCcEEeCC
Confidence 3579999999999875
No 151
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=69.25 E-value=3.1 Score=42.38 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCC-----CccEEEeCC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-----QVTHVVANS 1193 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~-----~VTHVVAa~ 1193 (1208)
+..+|.||.|+|.|-+.. +....+.++++..||+|+..... .+||+|...
T Consensus 114 ~~~lF~g~~~~~~~~~~~----~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~ 168 (229)
T 1l0b_A 114 QEKLFEGLQIYCCEPFTN----MPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQ 168 (229)
T ss_dssp C--CCTTCEEEECSCCSS----SCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC
T ss_pred hhhhhcCceEEEEecCCC----CCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEc
Confidence 458999999999875432 33567889999999999998865 368865544
No 152
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=69.17 E-value=6.7 Score=40.15 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=26.2
Q ss_pred HHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHhcCC
Q 000959 979 IWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPK 1013 (1208)
Q Consensus 979 LdEFLeeLS-klYEIVIYTAGtreYAd~VLdiLDP~ 1013 (1208)
..+.|+++. +-+.++|.|.-....+..+++.|...
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456677765 46888898988888888888887654
No 153
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=68.93 E-value=5 Score=40.74 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
+++.+++|||+||+.+.
T Consensus 5 ~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CSEEEEEESBTTTBCTT
T ss_pred CceEEEEECCCCcCCCC
Confidence 56789999999999764
No 154
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=68.41 E-value=2.1 Score=43.50 Aligned_cols=82 Identities=13% Similarity=0.066 Sum_probs=53.2
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+.+.||+.++|+.+.+. |.++|+|++.+. +..+++.+.-.. +|.. +++.++.. ..++. +..+.+=+. .+|.+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~-~f~~-~~~~~~~~-~~Kp~-~~~~~~~~~-~~g~~~ 178 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE-HFDF-VLTSEAAG-WPKPD-PRIFQEALR-LAHMEP 178 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG-GCSC-EEEHHHHS-SCTTS-HHHHHHHHH-HHTCCG
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH-hhhE-EEeecccC-CCCCC-HHHHHHHHH-HcCCCH
Confidence 57899999999999865 999999998874 677888776443 6654 45443321 11110 000111222 35666
Q ss_pred CcEEEEcCCC
Q 000959 1051 SAVVIIDDSV 1060 (1208)
Q Consensus 1051 srVVIIDDrp 1060 (1208)
..+|+|+|+.
T Consensus 179 ~~~~~vGD~~ 188 (263)
T 3k1z_A 179 VVAAHVGDNY 188 (263)
T ss_dssp GGEEEEESCH
T ss_pred HHEEEECCCc
Confidence 7899999996
No 155
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=66.90 E-value=2.3 Score=40.29 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=37.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeee
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAG 1019 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~ 1019 (1208)
..+.|++.++|+.+.+. +.++|+|.+...|+..+++.+.-.. +|..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~ 121 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFAN 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEe
Confidence 45689999999999764 9999999999999998888876543 4443
No 156
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=66.70 E-value=9.3 Score=39.34 Aligned_cols=16 Identities=19% Similarity=0.210 Sum_probs=13.2
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||++..
T Consensus 14 ~k~i~~D~DGtL~~~~ 29 (284)
T 2hx1_A 14 YKCIFFDAFGVLKTYN 29 (284)
T ss_dssp CSEEEECSBTTTEETT
T ss_pred CCEEEEcCcCCcCcCC
Confidence 4578999999999753
No 157
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=66.31 E-value=6.1 Score=41.22 Aligned_cols=64 Identities=6% Similarity=-0.050 Sum_probs=47.7
Q ss_pred HHHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCC-------------CccEEEeCCCCcHHHHHHHHh
Q 000959 1139 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-------------QVTHVVANSLGTDKVLLVVFS 1205 (1208)
Q Consensus 1139 iRrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~-------------~VTHVVAa~~GTeKVr~A~~~ 1205 (1208)
-+..+|.|+.|++++-+. |....+..+++..||+|...... ....||+....+..++.+.+.
T Consensus 118 ~~~~LF~G~~f~it~~~~-----~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~ 192 (219)
T 3sqd_A 118 HVSPLFKAKYFYITPGIC-----PSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFAR 192 (219)
T ss_dssp HHSCTTTTEEEEECTTCS-----SCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHT
T ss_pred ccccccCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHC
Confidence 367899999999987443 33456788999999999988742 235667777777778888777
Q ss_pred cC
Q 000959 1206 LL 1207 (1208)
Q Consensus 1206 gi 1207 (1208)
|+
T Consensus 193 ~~ 194 (219)
T 3sqd_A 193 GI 194 (219)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 158
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=63.88 E-value=5.2 Score=42.52 Aligned_cols=69 Identities=10% Similarity=0.084 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHhhhcCceEEeee-----eccCCCCCCCCchHHHHHHhcCCEE------ecccC-----CCccEEEeCCC
Q 000959 1131 DVRNILAAEQRKILAGCRIVFSR-----VFPVGEANPHLHPLWQTAEQFGAVC------TKHID-----DQVTHVVANSL 1194 (1208)
Q Consensus 1131 DVR~ILreiRrkVL~GC~IVFSG-----VfPlg~anPe~h~LWrLAEsFGAtc------t~sId-----~~VTHVVAa~~ 1194 (1208)
.+..+...++...-.++.+++|+ +.|.+. .....+..+++.+|... -.+.. ..+-+-||..+
T Consensus 190 ~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~--~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n 267 (301)
T 2b30_A 190 ESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGH--DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVAN 267 (301)
T ss_dssp THHHHHHHHHHHSTTTEEEEECTTSCEEEEETTC--CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTT
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCC--CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcC
Confidence 45566666655444567777775 345443 22345777788887421 11111 23455666666
Q ss_pred CcHHHHH
Q 000959 1195 GTDKVLL 1201 (1208)
Q Consensus 1195 GTeKVr~ 1201 (1208)
+.+.++.
T Consensus 268 a~~~~k~ 274 (301)
T 2b30_A 268 ATDSAKS 274 (301)
T ss_dssp CCHHHHH
T ss_pred CcHHHHh
Confidence 6665543
No 159
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=63.58 E-value=6.9 Score=40.04 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=46.7
Q ss_pred HHHHHHHH-HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCc--cEEEeCC-CCcHHHHHHHHhcC
Q 000959 1132 VRNILAAE-QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQV--THVVANS-LGTDKVLLVVFSLL 1207 (1208)
Q Consensus 1132 VR~ILrei-RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~V--THVVAa~-~GTeKVr~A~~~gi 1207 (1208)
.+..+... +..+|+|+.|+|++.+. |....+.++++..||+|....+... +|+|... ....+++.+.+.|+
T Consensus 103 l~~~~~~a~~~~lF~g~~~~~~~~~~-----~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i 177 (209)
T 2etx_A 103 LQDALSRARERRLLEGYEIYVTPGVQ-----PPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGL 177 (209)
T ss_dssp HHHHHHHHHHSCTTTTCEEEECTTCS-----SCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTC
T ss_pred HHHHHhhhhhCCCcCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCC
Confidence 44444333 34799999999986432 3345788999999999998887542 6777643 34445555666554
No 160
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=63.22 E-value=2.9 Score=42.47 Aligned_cols=16 Identities=31% Similarity=0.428 Sum_probs=13.3
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 6 ~kli~~DlDGTLl~~~ 21 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNGT 21 (266)
T ss_dssp CSEEEEECSSSTTCHH
T ss_pred CCEEEEeCcCceEeCC
Confidence 4578999999999863
No 161
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=62.45 E-value=2.6 Score=39.66 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=51.3
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCC--CCccccCCCccCC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDER--VPKSKDLEGVLGM 1049 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er--~~yvKDLsrVLGr 1049 (1208)
+..+|++.++|+.+.+. |.++|+|++...++..+ +.+.-.. +|. .+...+.. +.+... ..+..-|..+ .
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~---~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MAN-RAIFEDGK---FQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EEE-EEEEETTE---EEEEECCSSCHHHHHGGG--T
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-hee-eEEeeCCc---eECCcCCccCHHHHHHhc--C
Confidence 47899999999999876 99999999999999888 8776443 333 33322211 111000 0122233333 2
Q ss_pred CCcEEEEcCCCc
Q 000959 1050 ESAVVIIDDSVR 1061 (1208)
Q Consensus 1050 DsrVVIIDDrpd 1061 (1208)
...++.|.|+..
T Consensus 150 ~~~~i~iGD~~~ 161 (201)
T 4ap9_A 150 DGFILAMGDGYA 161 (201)
T ss_dssp TSCEEEEECTTC
T ss_pred cCcEEEEeCCHH
Confidence 367889998864
No 162
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=61.57 E-value=5.9 Score=39.42 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=56.1
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhccccccCCCcceeeeeccceEEEEeccCHHHHHHHhhc-ccEEEEEcC
Q 000959 919 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 997 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt~~~evdP~~~Eil~~~ee~D~~~P~~~lFrlp~~~~yVKLRPGLdEFLeeLSk-lYEIVIYTA 997 (1208)
+-..||+|+|+||+....+ +.+... . . -.+.+|.+. .|+.|.+ -+.+.|-|.
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~~~~g~-----------------~-----~-~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg 60 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--VSGDQK-----------------E-----I-ISYDVKDAI--GISLLKKSGIEVRLISE 60 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--CCSSCC-----------------C-----E-EEEEHHHHH--HHHHHHHTTCEEEEECS
T ss_pred cCcEEEEeCccceECCcEE--EcCCCC-----------------E-----E-EEEecCcHH--HHHHHHHCCCEEEEEeC
Confidence 3457999999999976431 122100 0 0 112344443 5777764 599999998
Q ss_pred CcHHHHHHHHH--HhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-CcEEEEcCCCc
Q 000959 998 GNKLYATEMAK--VLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 998 GtreYAd~VLd--iLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-srVVIIDDrpd 1061 (1208)
. ..+..+++ .|+-. +|.. +.. ++ ..++.+...+|.+ ..++.|-|...
T Consensus 61 ~--~~~~~~l~~l~lgi~--~~~g-------~~~--K~----~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 61 R--ACSKQTLSALKLDCK--TEVS-------VSD--KL----ATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp S--CCCHHHHHTTCCCCC--EECS-------CSC--HH----HHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred c--HHHHHHHHHhCCCcE--EEEC-------CCC--hH----HHHHHHHHHcCcChHHEEEEeCCHh
Confidence 8 78888888 44322 2211 100 00 1223333345655 78889988764
No 163
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=60.98 E-value=7.4 Score=39.44 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=28.7
Q ss_pred HhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEec
Q 000959 1141 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK 1180 (1208)
Q Consensus 1141 rkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~ 1180 (1208)
..+|.||.|+|++-+. .+....+.++++..||+++.
T Consensus 102 ~~lF~g~~~~l~~~~~----~~~~~~l~~lI~~~GG~v~~ 137 (210)
T 2nte_A 102 PKLFDGCYFYLWGTFK----HHPKDNLIKLVTAGGGQILS 137 (210)
T ss_dssp CCTTTTCEEEECSCCS----SSCHHHHHHHHHHTTCEEES
T ss_pred ccccCceEEEEeccCC----CCCHHHHHHHHHHCCCEEEe
Confidence 4699999999988442 23456789999999999986
No 164
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=60.61 E-value=9.9 Score=38.09 Aligned_cols=40 Identities=23% Similarity=0.141 Sum_probs=30.8
Q ss_pred HHHHHhcCCEEecccCCCccEEEeCCCC--------cHHHHHHHHhcC
Q 000959 1168 WQTAEQFGAVCTKHIDDQVTHVVANSLG--------TDKVLLVVFSLL 1207 (1208)
Q Consensus 1168 WrLAEsFGAtct~sId~~VTHVVAa~~G--------TeKVr~A~~~gi 1207 (1208)
.+-.+.+||.|++=++..|||||..+.- ++=...|++.||
T Consensus 36 k~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~m 83 (134)
T 3oq4_A 36 KRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYM 83 (134)
T ss_dssp HHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTC
T ss_pred HHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCC
Confidence 3345799999999999999999999833 333577777665
No 165
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=59.94 E-value=5.3 Score=44.88 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=32.9
Q ss_pred hHHHHHHhcCCEEeccc-CCCccEEEeCCCC----cHHHHHHHHhcC
Q 000959 1166 PLWQTAEQFGAVCTKHI-DDQVTHVVANSLG----TDKVLLVVFSLL 1207 (1208)
Q Consensus 1166 ~LWrLAEsFGAtct~sI-d~~VTHVVAa~~G----TeKVr~A~~~gi 1207 (1208)
.+....+++|+.++ +. .+.|||||..+.. |.|+-+|+=+|.
T Consensus 128 ~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gk 173 (325)
T 3huf_A 128 QWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKT 173 (325)
T ss_dssp HHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCC
Confidence 36678899999999 77 6789999997544 566999987764
No 166
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=59.90 E-value=2.2 Score=43.61 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++||||||+++.
T Consensus 3 kli~~DlDGTLl~~~ 17 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE 17 (261)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred cEEEEeCCCCCcCCC
Confidence 368999999999875
No 167
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=59.83 E-value=7.1 Score=39.47 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 5 ~k~v~fDlDGTL~~~~ 20 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCeEEeCC
Confidence 4579999999999875
No 168
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=59.62 E-value=5.1 Score=42.70 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=41.4
Q ss_pred HhhhcCceEEeeeeccCCCCCCCCchHHH-HHHhcCCEEecccC---------CCccEEEeCCC--CcHHHHHHHHhcC
Q 000959 1141 RKILAGCRIVFSRVFPVGEANPHLHPLWQ-TAEQFGAVCTKHID---------DQVTHVVANSL--GTDKVLLVVFSLL 1207 (1208)
Q Consensus 1141 rkVL~GC~IVFSGVfPlg~anPe~h~LWr-LAEsFGAtct~sId---------~~VTHVVAa~~--GTeKVr~A~~~gi 1207 (1208)
.++|+||.|++++-+. +....+|. +++.+||++..... ...+|||.... ..++.+.|.+.++
T Consensus 153 ~~LF~G~~I~i~~~~~-----~~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i 226 (259)
T 1kzy_C 153 ENPFQNLKVLLVSDQQ-----QNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQL 226 (259)
T ss_dssp CCTTTTCEEEEEESCT-----TTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTC
T ss_pred CCCCCCeEEEEecCCC-----CCHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCC
Confidence 6899999999987542 11234565 88999999886653 24566665542 2456667777665
No 169
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=59.37 E-value=8 Score=40.11 Aligned_cols=16 Identities=31% Similarity=0.515 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
.+.+++|||+||+++.
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 5679999999999874
No 170
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=58.14 E-value=4 Score=39.33 Aligned_cols=83 Identities=20% Similarity=0.185 Sum_probs=54.0
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCC--CCCCCCCccccCCCccCCC
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPF--DGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~f--dG~er~~yvKDLsrVLGrD 1050 (1208)
+...|++.++|+.+.. .++|.|++.+.++..+++.+.-. .+|.+.+++.++... . .+. . ..++.+-..+|.+
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~-~~~kpk-~-~~~~~~~~~l~~~ 159 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLK-PYFAPHIYSAKDLGA-DRVKPK-P-DIFLHGAAQFGVS 159 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCG-GGTTTCEEEHHHHCT-TCCTTS-S-HHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChH-HhccceEEecccccc-CCCCcC-H-HHHHHHHHHcCCC
Confidence 5678999999999876 89999999999999999988654 356233555432110 0 100 0 0112222235666
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
+.++.|+|+..
T Consensus 160 ~~~~i~iGD~~~ 171 (229)
T 2fdr_A 160 PDRVVVVEDSVH 171 (229)
T ss_dssp GGGEEEEESSHH
T ss_pred hhHeEEEcCCHH
Confidence 78999999863
No 171
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=58.08 E-value=3.1 Score=41.30 Aligned_cols=84 Identities=12% Similarity=0.044 Sum_probs=51.1
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHH-HhcCCCceeeeeEEecC--CCCCCCCCCCCCCccccCCCccC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAK-VLDPKGVLFAGRVISRG--DDGDPFDGDERVPKSKDLEGVLG 1048 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLd-iLDP~gkLFs~RIiSRD--Dc~~~fdG~er~~yvKDLsrVLG 1048 (1208)
+...|++.++|+.+.+. |.++|+|++.+.++...+. .+.-. .+|.. +++.+ +.. ..+.. . ..++-+-..+|
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~-~~~~~~~~~~-~~Kp~-~-~~~~~~~~~lg 185 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSH-IVLGDDPEVQ-HGKPD-P-DIFLACAKRFS 185 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSC-EECTTCTTCC-SCTTS-T-HHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheee-EEecchhhcc-CCCCC-h-HHHHHHHHHcC
Confidence 56899999999999876 9999999999888776552 22211 25654 45443 221 11110 0 01112222355
Q ss_pred CC---CcEEEEcCCCc
Q 000959 1049 ME---SAVVIIDDSVR 1061 (1208)
Q Consensus 1049 rD---srVVIIDDrpd 1061 (1208)
.+ +.+|.|+|+..
T Consensus 186 i~~~~~~~i~iGD~~~ 201 (250)
T 3l5k_A 186 PPPAMEKCLVFEDAPN 201 (250)
T ss_dssp SCCCGGGEEEEESSHH
T ss_pred CCCCcceEEEEeCCHH
Confidence 43 78999999973
No 172
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=58.04 E-value=4.6 Score=41.61 Aligned_cols=15 Identities=47% Similarity=0.640 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++|||+||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDA 18 (271)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred cEEEEeCCCCCCCCC
Confidence 468999999999864
No 173
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=57.10 E-value=6.7 Score=37.43 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=51.0
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+..+|++.++|+.+.+. +.+.|+|++ .++..+++.++-.. +|.. +++.++.. ..++. + ..++-+-..+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~lgi~~ 162 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDA-IADPAEVA-ASKPA-P-DIFIAAAHAVGVAP 162 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCSE-ECCTTTSS-SCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hcce-EeccccCC-CCCCC-h-HHHHHHHHHcCCCh
Confidence 35689999999999864 999999998 56777777775433 5654 44433221 11110 0 0112222235666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.++.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (221)
T 2wf7_A 163 SESIGLEDSQA 173 (221)
T ss_dssp GGEEEEESSHH
T ss_pred hHeEEEeCCHH
Confidence 78999999863
No 174
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=56.65 E-value=12 Score=38.25 Aligned_cols=66 Identities=23% Similarity=0.156 Sum_probs=40.9
Q ss_pred Hhhh-cCceEEeeeeccCCCCCCC--------CchHHHHHHhcCCEEecccCCCccEEEeCCC--------CcHHHHHHH
Q 000959 1141 RKIL-AGCRIVFSRVFPVGEANPH--------LHPLWQTAEQFGAVCTKHIDDQVTHVVANSL--------GTDKVLLVV 1203 (1208)
Q Consensus 1141 rkVL-~GC~IVFSGVfPlg~anPe--------~h~LWrLAEsFGAtct~sId~~VTHVVAa~~--------GTeKVr~A~ 1203 (1208)
++|. ++.+|+|-..-... .+.. ...|.+-...+||.|++=++..|||||..+. .++=...|+
T Consensus 18 rkIM~r~s~iYFdt~~~~~-~~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rAr 96 (151)
T 3oq0_A 18 GSHMKRDSRIYFDITDDVE-MNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAK 96 (151)
T ss_dssp ---CCCCCEEEECCCCSSC-CCHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHH
T ss_pred HHHhccCCEEEEeCCCcch-hhHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHH
Confidence 4566 88999997532111 0100 0123344579999999999999999999983 344446677
Q ss_pred HhcC
Q 000959 1204 FSLL 1207 (1208)
Q Consensus 1204 ~~gi 1207 (1208)
+.||
T Consensus 97 ~~~m 100 (151)
T 3oq0_A 97 KNYM 100 (151)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 6665
No 175
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=55.76 E-value=16 Score=38.23 Aligned_cols=16 Identities=25% Similarity=0.327 Sum_probs=12.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+...
T Consensus 21 ~k~i~~D~DGTL~~~~ 36 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGE 36 (306)
T ss_dssp CSEEEECSBTTTEETT
T ss_pred CCEEEECCCCcEecCC
Confidence 3468999999999753
No 176
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=54.99 E-value=4.4 Score=38.59 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 6 ~k~v~fDlDGTL~d~~ 21 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSS 21 (225)
T ss_dssp CSEEEECCBTTTEECH
T ss_pred CCEEEEeCCCCCCCCH
Confidence 3578999999999875
No 177
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=53.19 E-value=7.1 Score=39.08 Aligned_cols=41 Identities=24% Similarity=0.243 Sum_probs=32.4
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD 1184 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~ 1184 (1208)
+..+|.||.|+|++-+.. +....+..+++.+||+++.++..
T Consensus 112 ~~~lF~g~~~~~~~~~~~----~~~~~l~~li~~~GG~v~~~~~~ 152 (214)
T 1t15_A 112 DRKIFRGLEICCYGPFTN----MPTDQLEWMVQLCGASVVKELSS 152 (214)
T ss_dssp TSCTTTTCEEEECSCCSS----SCHHHHHHHHHHTTCEECCSGGG
T ss_pred CCcccCCCEEEEEecCCC----CCHHHHHHHHHHCCCEEecCccc
Confidence 356999999999875532 33567889999999999998865
No 178
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=52.76 E-value=7.3 Score=39.84 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=21.0
Q ss_pred ccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHH
Q 000959 976 RPGIWTFLERASKLFEMHLYTMGNKLYATEMAKV 1009 (1208)
Q Consensus 976 RPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdi 1009 (1208)
-|...+.|+++.+.-.++|-|.-....+..+++.
T Consensus 25 ~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~ 58 (239)
T 1u02_A 25 DAGLLSLISDLKERFDTYIVTGRSPEEISRFLPL 58 (239)
T ss_dssp CHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCS
T ss_pred CHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhcc
Confidence 4667777887764336777776655555555443
No 179
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=52.61 E-value=5.1 Score=38.73 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 4 ~k~iifDlDGTL~d~~ 19 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVE 19 (234)
T ss_dssp CEEEEECCBTTTEEEC
T ss_pred ceEEEEcCCCCcccCc
Confidence 3578999999999985
No 180
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=52.05 E-value=4.9 Score=37.46 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 5 k~i~fDlDGTL~~~~ 19 (207)
T 2go7_A 5 TAFIWDLDGTLLDSY 19 (207)
T ss_dssp CEEEECTBTTTEECH
T ss_pred cEEEEeCCCcccccH
Confidence 478999999999875
No 181
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=51.69 E-value=5.3 Score=38.67 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeccc
Q 000959 921 LCLVLDLDHTLLNSAK 936 (1208)
Q Consensus 921 LTLVLDLDETLIHSt~ 936 (1208)
..+++|||+||+++..
T Consensus 4 k~i~fDlDGTLl~~~~ 19 (250)
T 2c4n_A 4 KNVICDIDGVLMHDNV 19 (250)
T ss_dssp CEEEEECBTTTEETTE
T ss_pred cEEEEcCcceEEeCCE
Confidence 4789999999999863
No 182
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=51.54 E-value=5.7 Score=43.00 Aligned_cols=82 Identities=18% Similarity=0.097 Sum_probs=52.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCC------cHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCC
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMG------NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 1045 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAG------treYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsr 1045 (1208)
+.+.|++.++|+.|.+. |.++|.|++ .+......+.-|+ .+|.. |++.++.. ..+.+ +..|.+=++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---~~fd~-i~~~~~~~-~~KP~-p~~~~~~~~- 171 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK---MHFDF-LIESCQVG-MVKPE-PQIYKFLLD- 171 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---TTSSE-EEEHHHHT-CCTTC-HHHHHHHHH-
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh---hheeE-EEeccccC-CCCCC-HHHHHHHHH-
Confidence 57889999999999876 999999999 6666665554454 26765 55444322 11210 011222333
Q ss_pred ccCCC-CcEEEEcCCCc
Q 000959 1046 VLGME-SAVVIIDDSVR 1061 (1208)
Q Consensus 1046 VLGrD-srVVIIDDrpd 1061 (1208)
.+|.+ +.+++|||+..
T Consensus 172 ~lg~~p~~~~~v~D~~~ 188 (555)
T 3i28_A 172 TLKASPSEVVFLDDIGA 188 (555)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCChhHEEEECCcHH
Confidence 35666 78999999864
No 183
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=51.39 E-value=5.7 Score=41.02 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
..+.+++||||||+.+.
T Consensus 21 ~~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT 37 (289)
T ss_dssp CSEEEEEETBTTTBCSS
T ss_pred CCeEEEEECCCCCcCCC
Confidence 46789999999999874
No 184
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=50.83 E-value=5.1 Score=37.68 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 5 ~k~i~fDlDGTL~~~~ 20 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTE 20 (214)
T ss_dssp CCEEEEESBTTTBCCH
T ss_pred ccEEEEcCCCCccccH
Confidence 4579999999999875
No 185
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=50.76 E-value=4.7 Score=37.90 Aligned_cols=16 Identities=31% Similarity=0.293 Sum_probs=13.4
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 6 ~k~i~fDlDGTL~d~~ 21 (190)
T 2fi1_A 6 YHDYIWDLGGTLLDNY 21 (190)
T ss_dssp CSEEEECTBTTTBCHH
T ss_pred ccEEEEeCCCCcCCCH
Confidence 3578999999999875
No 186
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=50.35 E-value=5.1 Score=40.43 Aligned_cols=17 Identities=35% Similarity=0.411 Sum_probs=14.1
Q ss_pred CeEEEEeCCCceeeccc
Q 000959 920 KLCLVLDLDHTLLNSAK 936 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt~ 936 (1208)
.+.+++||||||+.+..
T Consensus 5 ~kli~fDlDGTLl~~~~ 21 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVY 21 (274)
T ss_dssp CCEEEECSBTTTBBTTT
T ss_pred ceEEEEECCCCCCCCCC
Confidence 35689999999999863
No 187
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=49.60 E-value=7 Score=40.80 Aligned_cols=53 Identities=9% Similarity=0.037 Sum_probs=37.5
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcC--------CCceeeeeEEecCC
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDP--------KGVLFAGRVISRGD 1026 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP--------~gkLFs~RIiSRDD 1026 (1208)
..+.||+.++|+.|.+ -|.|.|.|+....|+..+..+|+- .|-.|.. ++.+++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~ 248 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVM-QCQREQ 248 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSE-EEECCT
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchh-eeeccC
Confidence 4568999999999976 599999999998887554444433 3434543 565543
No 188
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=49.54 E-value=10 Score=37.69 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=51.5
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+.+.||+.++|+.|.+...++|.|++.+.|+..+++.+.-.. +|...+.... .+. .+.+-+.. |.+ +
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~~~~-----~K~----~~~~~~~~--~~~~~ 162 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVLIYI-----HKE----LMLDQVME--CYPAR 162 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEEEES-----SGG----GCHHHHHH--HSCCS
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEEecC-----ChH----HHHHHHHh--cCCCc
Confidence 567899999999998776899999999999999998764332 4543222110 000 12222211 334 6
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+|+|+|+..
T Consensus 163 ~~~~vgDs~~ 172 (231)
T 2p11_A 163 HYVMVDDKLR 172 (231)
T ss_dssp EEEEECSCHH
T ss_pred eEEEEcCccc
Confidence 8999999975
No 189
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=48.77 E-value=5.9 Score=39.31 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
....+++|||+||+.+.
T Consensus 10 ~~k~viFDlDGTL~ds~ 26 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDND 26 (231)
T ss_dssp CSEEEEECCBTTTBCHH
T ss_pred CCeEEEEcCCCCCEecH
Confidence 45589999999999885
No 190
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=48.45 E-value=5.9 Score=38.06 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+++.
T Consensus 5 k~iifDlDGTL~d~~ 19 (209)
T 2hdo_A 5 QALMFDIDGTLTNSQ 19 (209)
T ss_dssp SEEEECSBTTTEECH
T ss_pred cEEEEcCCCCCcCCH
Confidence 478999999999875
No 191
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=48.32 E-value=6.5 Score=38.42 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (210)
T 2ah5_A 4 ITAIFFDLDGTLVDSS 19 (210)
T ss_dssp CCEEEECSBTTTEECH
T ss_pred CCEEEEcCCCcCccCH
Confidence 3578999999999975
No 192
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=48.15 E-value=5.5 Score=37.92 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 9 ~k~i~fDlDGTL~~~~ 24 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE 24 (226)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred CCEEEECCCCCcCcCH
Confidence 3578999999999875
No 193
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=47.93 E-value=6.3 Score=37.86 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=13.0
Q ss_pred EEEEeCCCceeeccc
Q 000959 922 CLVLDLDHTLLNSAK 936 (1208)
Q Consensus 922 TLVLDLDETLIHSt~ 936 (1208)
.+++|||+||+.+..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (201)
T 2w43_A 3 ILAFDIFGTVLDTST 17 (201)
T ss_dssp EEEECCBTTTEEGGG
T ss_pred EEEEeCCCceecchh
Confidence 689999999999863
No 194
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=47.65 E-value=5 Score=38.34 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 3 KAVLFDLDGVITDTA 17 (221)
T ss_dssp CEEEECCBTTTBTHH
T ss_pred cEEEECCCCcccCCh
Confidence 368999999999875
No 195
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=47.60 E-value=12 Score=37.39 Aligned_cols=85 Identities=12% Similarity=-0.000 Sum_probs=53.4
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
+...|++.++|+.+.+. |.++|.|++...++..+++.+.-.+ +|.+.+++.++... ..+. . ..++.+-..+|.+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPA-GRPY-P-WMCYKNAMELGVYP 177 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSC-CTTS-S-HHHHHHHHHHTCCS
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCC-CCCC-H-HHHHHHHHHhCCCC
Confidence 45689999999999764 9999999999999999998875444 33233444332210 0100 0 0112222234653
Q ss_pred -CcEEEEcCCCc
Q 000959 1051 -SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 -srVVIIDDrpd 1061 (1208)
+.++.|.|+..
T Consensus 178 ~~~~i~iGD~~n 189 (267)
T 1swv_A 178 MNHMIKVGDTVS 189 (267)
T ss_dssp GGGEEEEESSHH
T ss_pred CcCEEEEeCCHH
Confidence 57999999863
No 196
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=47.56 E-value=6.1 Score=38.07 Aligned_cols=15 Identities=27% Similarity=0.425 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+++.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSE 19 (229)
T ss_dssp SEEEECSBTTTBCCH
T ss_pred cEEEEcCCCCcCccH
Confidence 478999999999875
No 197
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=47.34 E-value=9.5 Score=38.54 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=53.0
Q ss_pred EeccCHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 974 KLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 974 KLRPGLdEFLeeLS-klYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
.+.||+.++|+.+. ..+-+.|.|++. .+..+++.+.-.. +|.. |++.++.. ..+++ +..|.+=++ .+|.+ +
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~-~fd~-i~~~~~~~-~~KP~-p~~~~~a~~-~lg~~p~ 167 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELRE-FFTF-CADASQLK-NSKPD-PEIFLAACA-GLGVPPQ 167 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGG-GCSE-ECCGGGCS-SCTTS-THHHHHHHH-HHTSCGG
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcc-cccc-cccccccc-CCCCc-HHHHHHHHH-HcCCChH
Confidence 46899999999996 568899998765 4677888876554 6754 55544322 11211 112333344 35766 8
Q ss_pred cEEEEcCCCc
Q 000959 1052 AVVIIDDSVR 1061 (1208)
Q Consensus 1052 rVVIIDDrpd 1061 (1208)
.+|+|+|++.
T Consensus 168 e~l~VgDs~~ 177 (243)
T 4g9b_A 168 ACIGIEDAQA 177 (243)
T ss_dssp GEEEEESSHH
T ss_pred HEEEEcCCHH
Confidence 9999999863
No 198
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.31 E-value=5.8 Score=37.88 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 8 ik~i~fDlDGTL~~~~ 23 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNE 23 (234)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred ccEEEEeCCCCCccCc
Confidence 3578999999999875
No 199
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=47.09 E-value=6.9 Score=37.04 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.3
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 4 ik~i~fDlDGTL~d~~ 19 (219)
T 3kd3_A 4 MKNIIFDFDSTLIKKE 19 (219)
T ss_dssp CEEEEECCCCCCBSSC
T ss_pred ceEEEEeCCCCCcCcc
Confidence 3578999999999864
No 200
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=47.00 E-value=5.9 Score=38.20 Aligned_cols=16 Identities=44% Similarity=0.501 Sum_probs=13.5
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 4 ~k~i~fDlDGTL~d~~ 19 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSA 19 (226)
T ss_dssp CCEEEECSBTTTBCCH
T ss_pred CCEEEEeCCCccccCH
Confidence 3578999999999875
No 201
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=46.84 E-value=6.3 Score=37.78 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 6 k~iiFDlDGTL~d~~ 20 (211)
T 2i6x_A 6 RNIVFDLGGVLIHLN 20 (211)
T ss_dssp SEEEECSBTTTEEEC
T ss_pred eEEEEeCCCeeEecc
Confidence 579999999999875
No 202
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=46.77 E-value=7.1 Score=38.01 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=15.1
Q ss_pred CCCeEEEEeCCCceeecc
Q 000959 918 ARKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 918 ~rKLTLVLDLDETLIHSt 935 (1208)
.+-..+++|||+||+.+.
T Consensus 17 ~~ik~i~fDlDGTL~d~~ 34 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTP 34 (237)
T ss_dssp CCCEEEEECSBTTTBCCH
T ss_pred ccCCEEEEcCCCCCcCCH
Confidence 456789999999999875
No 203
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=46.57 E-value=6.1 Score=40.33 Aligned_cols=15 Identities=40% Similarity=0.592 Sum_probs=12.7
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++|||+||+.+.
T Consensus 1 ~li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER 15 (259)
T ss_dssp CEEEECCCCCCSCSS
T ss_pred CEEEEeCCCCCcCCC
Confidence 368999999999774
No 204
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=46.52 E-value=7.3 Score=37.49 Aligned_cols=16 Identities=38% Similarity=0.607 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 6 ~k~i~fDlDGTL~~~~ 21 (233)
T 3s6j_A 6 QTSFIFDLDGTLTDSV 21 (233)
T ss_dssp CCEEEECCBTTTEECH
T ss_pred CcEEEEcCCCccccCh
Confidence 4679999999999875
No 205
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=46.20 E-value=6.1 Score=39.32 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 13 ~k~iifDlDGTL~d~~ 28 (251)
T 2pke_A 13 IQLVGFDGDDTLWKSE 28 (251)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred eeEEEEeCCCCCccCc
Confidence 3579999999999875
No 206
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=46.18 E-value=6.8 Score=38.13 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 5 k~viFDlDGTL~d~~ 19 (232)
T 1zrn_A 5 KGIAFDLYGTLFDVH 19 (232)
T ss_dssp CEEEECSBTTTEETH
T ss_pred eEEEEecCCcccCch
Confidence 478999999999875
No 207
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=45.97 E-value=6.3 Score=38.06 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 7 ~k~i~fDlDGTL~d~~ 22 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQ 22 (238)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEcCcCcCcCCc
Confidence 4578999999999875
No 208
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=45.94 E-value=4 Score=39.50 Aligned_cols=78 Identities=23% Similarity=0.170 Sum_probs=47.6
Q ss_pred EEeccCHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-C
Q 000959 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 1051 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSklYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD-s 1051 (1208)
+...|++.++|+.+.+.|.++|+|++... ++.+.-. .+|.. +++.++... .++. . ..++-+-..+|.+ +
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~~ 173 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFAF-ALCAEDLGI-GKPD-P-APFLEALRRAKVDAS 173 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCSE-EEEHHHHTC-CTTS-H-HHHHHHHHHHTCCGG
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHeee-eEEccccCC-CCcC-H-HHHHHHHHHhCCCch
Confidence 56889999999999988999999999865 3333222 35654 554432211 1100 0 0111222235766 7
Q ss_pred cEEEEcCCC
Q 000959 1052 AVVIIDDSV 1060 (1208)
Q Consensus 1052 rVVIIDDrp 1060 (1208)
.+++|+|+.
T Consensus 174 ~~~~vGD~~ 182 (230)
T 3vay_A 174 AAVHVGDHP 182 (230)
T ss_dssp GEEEEESCT
T ss_pred heEEEeCCh
Confidence 899999986
No 209
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=45.79 E-value=5.9 Score=38.09 Aligned_cols=15 Identities=27% Similarity=0.291 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 5 KLVTFDVWNTLLDLN 19 (235)
T ss_dssp CEEEECCBTTTBCHH
T ss_pred eEEEEeCCCCCCCcc
Confidence 478999999999875
No 210
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=45.73 E-value=6.7 Score=39.72 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=51.1
Q ss_pred EEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC-
Q 000959 973 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 1050 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD- 1050 (1208)
..+.||+.++|+.+.+ .+-+.+-|+ ..++..+++.+.-.. +|.. |++.++.. ..+++ +..+.+-++ .+|..
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~--~~~~~~~L~~~gl~~-~Fd~-i~~~~~~~-~~KP~-p~~~~~a~~-~lg~~p 187 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSA--SKNAINVLNHLGISD-KFDF-IADAGKCK-NNKPH-PEIFLMSAK-GLNVNP 187 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCS--CTTHHHHHHHHTCGG-GCSE-ECCGGGCC-SCTTS-SHHHHHHHH-HHTCCG
T ss_pred cccchhHHHHHHHHHhcccccccccc--cchhhhHhhhccccc-ccce-eecccccC-CCCCc-HHHHHHHHH-HhCCCh
Confidence 3468999999999975 456665544 456788888877654 7765 66555432 11211 112233344 35666
Q ss_pred CcEEEEcCCCc
Q 000959 1051 SAVVIIDDSVR 1061 (1208)
Q Consensus 1051 srVVIIDDrpd 1061 (1208)
+.+|+|+|++.
T Consensus 188 ~e~l~VGDs~~ 198 (250)
T 4gib_A 188 QNCIGIEDASA 198 (250)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEECCCHH
Confidence 78999999864
No 211
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=45.57 E-value=7 Score=37.28 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=13.5
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 4 IKALFWDIGGVLLTNG 19 (200)
T ss_dssp CCEEEECCBTTTBCCS
T ss_pred ceEEEEeCCCeeECCC
Confidence 3578999999999875
No 212
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=45.52 E-value=6 Score=38.45 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (233)
T 3nas_A 3 KAVIFDLDGVITDTA 17 (233)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEECCCCCcCCCH
Confidence 468999999999875
No 213
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=45.47 E-value=18 Score=38.54 Aligned_cols=47 Identities=9% Similarity=0.132 Sum_probs=40.9
Q ss_pred EEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeee
Q 000959 973 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGR 1020 (1208)
Q Consensus 973 VKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~R 1020 (1208)
+.++|++.++|+.+.+. |.++|.|++...++..+++.+.-.. +|...
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~ 224 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNT 224 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEE
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeee
Confidence 56899999999999875 9999999999999999999987654 66654
No 214
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=45.28 E-value=7.2 Score=38.19 Aligned_cols=16 Identities=44% Similarity=0.588 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
+..+|+|||+||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLD 19 (232)
T ss_dssp CEEEEECCBTTTBSSC
T ss_pred CcEEEEeCCCCCcCCc
Confidence 4578999999999875
No 215
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=44.70 E-value=7.4 Score=38.51 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+++.
T Consensus 13 k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 13 RGVLLDISGVLYDSG 27 (271)
T ss_dssp CEEEECCBTTTEECC
T ss_pred CEEEEeCCCeEEecC
Confidence 468999999999974
No 216
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=43.86 E-value=7.8 Score=38.06 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
....+++|||+||+++.
T Consensus 21 ~ik~i~fDlDGTL~d~~ 37 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWR 37 (254)
T ss_dssp SCCEEEECCBTTTEEHH
T ss_pred CCcEEEEeCCCccEecC
Confidence 35679999999999875
No 217
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=43.84 E-value=32 Score=32.47 Aligned_cols=17 Identities=35% Similarity=0.649 Sum_probs=14.1
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
+...+++||||||+++.
T Consensus 4 ~~k~i~fDlDGTL~d~~ 20 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE 20 (211)
T ss_dssp CCEEEEEECCCCCBSSC
T ss_pred CCcEEEEeCCCCCCCcc
Confidence 34579999999999984
No 218
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=43.34 E-value=6.6 Score=37.76 Aligned_cols=16 Identities=25% Similarity=0.175 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 6 ~k~i~fD~DGTL~d~~ 21 (240)
T 3smv_A 6 FKALTFDCYGTLIDWE 21 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEeCCCcCcCCc
Confidence 3578999999999875
No 219
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=43.09 E-value=8.8 Score=38.48 Aligned_cols=16 Identities=44% Similarity=0.411 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 23 ~k~iiFDlDGTL~d~~ 38 (243)
T 2hsz_A 23 FKLIGFDLDGTLVNSL 38 (243)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred CCEEEEcCCCcCCCCH
Confidence 3478999999999985
No 220
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=42.84 E-value=8 Score=38.51 Aligned_cols=15 Identities=27% Similarity=0.605 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 5 k~viFDlDGTL~ds~ 19 (240)
T 2hi0_A 5 KAAIFDMDGTILDTS 19 (240)
T ss_dssp SEEEECSBTTTEECH
T ss_pred cEEEEecCCCCccCH
Confidence 468999999999985
No 221
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=42.84 E-value=7.4 Score=37.61 Aligned_cols=15 Identities=40% Similarity=0.576 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+++.
T Consensus 3 k~i~fDlDGTL~~~~ 17 (230)
T 3vay_A 3 KLVTFDLDDTLWDTA 17 (230)
T ss_dssp CEEEECCBTTTBCSH
T ss_pred eEEEecCcccCcCCc
Confidence 468999999999875
No 222
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=42.72 E-value=9.5 Score=36.94 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 4 ~k~i~FDlDGTL~d~~ 19 (233)
T 3umb_A 4 IRAVVFDAYGTLFDVY 19 (233)
T ss_dssp CCEEEECSBTTTEETH
T ss_pred ceEEEEeCCCcccccH
Confidence 4578999999999875
No 223
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=42.47 E-value=8.2 Score=37.38 Aligned_cols=14 Identities=21% Similarity=0.683 Sum_probs=12.3
Q ss_pred EEEEeCCCceeecc
Q 000959 922 CLVLDLDHTLLNSA 935 (1208)
Q Consensus 922 TLVLDLDETLIHSt 935 (1208)
.+++|||+||+.+.
T Consensus 3 AViFD~DGTL~ds~ 16 (216)
T 3kbb_A 3 AVIFDMDGVLMDTE 16 (216)
T ss_dssp EEEEESBTTTBCCG
T ss_pred EEEECCCCcccCCH
Confidence 58999999999875
No 224
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=42.41 E-value=8 Score=38.61 Aligned_cols=15 Identities=7% Similarity=0.129 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++||||||+++.
T Consensus 7 k~i~fDlDGTLld~~ 21 (267)
T 1swv_A 7 EAVIFAWAGTTVDYG 21 (267)
T ss_dssp CEEEECSBTTTBSTT
T ss_pred eEEEEecCCCEEeCC
Confidence 478999999999975
No 225
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=41.98 E-value=7.3 Score=37.92 Aligned_cols=16 Identities=13% Similarity=0.087 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+++.
T Consensus 15 ~k~i~fDlDGTL~d~~ 30 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWR 30 (254)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred ceEEEEeCCCceecCc
Confidence 4679999999999875
No 226
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=41.94 E-value=9.8 Score=37.90 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
...++++|||+||+.+.
T Consensus 27 ~ik~i~fDlDGTL~d~~ 43 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESE 43 (259)
T ss_dssp CCSEEEEESBTTTEECH
T ss_pred CCCEEEECCCCCcccCH
Confidence 45689999999999875
No 227
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=41.76 E-value=8.6 Score=38.10 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=14.3
Q ss_pred CCeEEEEeCCCceeecc
Q 000959 919 RKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 919 rKLTLVLDLDETLIHSt 935 (1208)
....+++|||+||+++.
T Consensus 29 ~ik~i~fDlDGTL~d~~ 45 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTE 45 (250)
T ss_dssp CCSEEEEETBTTTBCHH
T ss_pred CCcEEEEcCCCCcCCCH
Confidence 45679999999999875
No 228
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=41.63 E-value=7.7 Score=37.48 Aligned_cols=15 Identities=20% Similarity=0.064 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (234)
T 3u26_A 3 RAVFFDSLGTLNSVE 17 (234)
T ss_dssp CEEEECSTTTTBCHH
T ss_pred cEEEEcCCCcccccc
Confidence 468999999999875
No 229
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=41.57 E-value=7.5 Score=38.42 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 3 k~iiFDlDGTL~d~~ 17 (241)
T 2hoq_A 3 KVIFFDLDDTLVDTS 17 (241)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEEcCCCCCCCCh
Confidence 368999999999875
No 230
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=41.53 E-value=9.5 Score=37.43 Aligned_cols=15 Identities=20% Similarity=0.386 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 4 k~viFDlDGTL~d~~ 18 (220)
T 2zg6_A 4 KAVLVDFGNTLVGFK 18 (220)
T ss_dssp CEEEECSBTTTEEEE
T ss_pred eEEEEcCCCceeccc
Confidence 478999999999885
No 231
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=41.42 E-value=8.7 Score=37.82 Aligned_cols=16 Identities=31% Similarity=0.216 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 14 ~k~viFDlDGTL~d~~ 29 (240)
T 2no4_A 14 LRACVFDAYGTLLDVH 29 (240)
T ss_dssp CCEEEECCBTTTBCTT
T ss_pred ccEEEEeCCCcccccH
Confidence 4579999999999875
No 232
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=41.35 E-value=9.5 Score=37.42 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 29 ik~iifDlDGTL~d~~ 44 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPK 44 (240)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred ccEEEEecCCcCccCH
Confidence 3689999999999875
No 233
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=40.27 E-value=9.1 Score=39.21 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++||||||+++.
T Consensus 36 k~iifDlDGTLlds~ 50 (275)
T 2qlt_A 36 NAALFDVDGTIIISQ 50 (275)
T ss_dssp SEEEECCBTTTEECH
T ss_pred CEEEECCCCCCCCCH
Confidence 478999999999985
No 234
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=40.26 E-value=8.5 Score=37.08 Aligned_cols=16 Identities=31% Similarity=0.345 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 5 ~k~i~fDlDGTL~d~~ 20 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFS 20 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEcCCCCCcCch
Confidence 4579999999999875
No 235
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=39.76 E-value=9.6 Score=37.57 Aligned_cols=16 Identities=31% Similarity=0.501 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
...+++|||+||+.+.
T Consensus 24 ~k~i~fDlDGTL~d~~ 39 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSM 39 (243)
T ss_dssp CCEEEECSBTTTBCCH
T ss_pred CCEEEEcCCCCCCCCH
Confidence 4579999999999875
No 236
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=39.72 E-value=8.7 Score=40.24 Aligned_cols=16 Identities=38% Similarity=0.474 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
.+.+++|||+||+.+.
T Consensus 37 iKli~fDlDGTLld~~ 52 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSK 52 (304)
T ss_dssp CSEEEECCCCCCSCTT
T ss_pred eEEEEEeCCCCCCCCC
Confidence 4679999999999875
No 237
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=39.71 E-value=8.7 Score=38.88 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++||||||+.|.
T Consensus 27 KaViFDlDGTLvDs~ 41 (250)
T 4gib_A 27 EAFIFDLDGVITDTA 41 (250)
T ss_dssp CEEEECTBTTTBCCH
T ss_pred heeeecCCCcccCCH
Confidence 468999999999864
No 238
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=39.02 E-value=8.7 Score=39.36 Aligned_cols=49 Identities=14% Similarity=0.212 Sum_probs=35.6
Q ss_pred HHhhhcCceEEeeeeccCCCCCCCCchHHHHHHhcCCEEecccCCCccEEEeCC
Q 000959 1140 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS 1193 (1208)
Q Consensus 1140 RrkVL~GC~IVFSGVfPlg~anPe~h~LWrLAEsFGAtct~sId~~VTHVVAa~ 1193 (1208)
+.++|.||.|+|.+=+ ..|....++.|++.+||+|+.++. .++++|+..
T Consensus 116 ~~~LF~g~~~~~v~~~----~~~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~~ 164 (199)
T 3u3z_A 116 RGTLFADQPVMFVSPA----SSPPVAKLCELVHLCGGRVSQVPR-QASIVIGPY 164 (199)
T ss_dssp CCCTTTTSCCEEECTT----CSSCHHHHHHHHHHTTCCBCSSGG-GCSEEESCC
T ss_pred cchhhCCCeEEEECCC----CCCCHHHHHHHHHHcCCEEeccCC-CCEEEEeCC
Confidence 4589999976664311 234456799999999999999885 567777653
No 239
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=37.61 E-value=9.8 Score=38.53 Aligned_cols=57 Identities=19% Similarity=0.120 Sum_probs=32.6
Q ss_pred hcCceEEeee-----eccCCCCCCCCchHHHHHHhcCCEEeccc------C-----CCccEEEeCCCCcHHHHHH
Q 000959 1144 LAGCRIVFSR-----VFPVGEANPHLHPLWQTAEQFGAVCTKHI------D-----DQVTHVVANSLGTDKVLLV 1202 (1208)
Q Consensus 1144 L~GC~IVFSG-----VfPlg~anPe~h~LWrLAEsFGAtct~sI------d-----~~VTHVVAa~~GTeKVr~A 1202 (1208)
+.++.+++++ +.|.+. .+...+.++++.+|.....-+ . ..+-|-||-.++.+.++.+
T Consensus 173 ~~~~~~~~~~~~~~ei~~~~~--~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~ 245 (268)
T 3r4c_A 173 LSGLSATRWHPLFADVNVAGT--SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSV 245 (268)
T ss_dssp CTTEEEEEEETTEEEEEETTC--CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHT
T ss_pred CCCcEEEEecCCeEEEeeCCC--CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHh
Confidence 5667777665 455442 223567778888886422111 1 2255667777777776654
No 240
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=37.43 E-value=20 Score=37.60 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=36.5
Q ss_pred EEEeccCHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHhc
Q 000959 972 WTKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLD 1011 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSk-lYEIVIYTAGtreYAd~VLdiLD 1011 (1208)
-+.+|||+.+|++.|.+ .+.++|+|.+...++.+|++.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 37899999999999985 59999999999999999999874
No 241
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=37.19 E-value=11 Score=37.06 Aligned_cols=15 Identities=47% Similarity=0.722 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 4 k~viFDlDGTL~d~~ 18 (222)
T 2nyv_A 4 RVILFDLDGTLIDSA 18 (222)
T ss_dssp CEEEECTBTTTEECH
T ss_pred CEEEECCCCcCCCCH
Confidence 368999999999875
No 242
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=36.51 E-value=11 Score=38.62 Aligned_cols=19 Identities=37% Similarity=0.600 Sum_probs=15.6
Q ss_pred cCCCeEEEEeCCCceeecc
Q 000959 917 SARKLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 917 s~rKLTLVLDLDETLIHSt 935 (1208)
..+...+++|||+||+.+.
T Consensus 15 ~~~~k~viFDlDGTLvds~ 33 (260)
T 2gfh_A 15 LSRVRAVFFDLDNTLIDTA 33 (260)
T ss_dssp CCCCCEEEECCBTTTBCHH
T ss_pred cccceEEEEcCCCCCCCCH
Confidence 3456689999999999875
No 243
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=35.71 E-value=11 Score=37.71 Aligned_cols=15 Identities=27% Similarity=0.321 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+.+.
T Consensus 3 k~viFDlDGTL~d~~ 17 (253)
T 1qq5_A 3 KAVVFDAYGTLFDVQ 17 (253)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred cEEEEeCCCCCCccH
Confidence 368999999999875
No 244
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=34.36 E-value=31 Score=38.83 Aligned_cols=51 Identities=4% Similarity=-0.044 Sum_probs=41.7
Q ss_pred EEEeccCHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHhcC-----CCceeeeeEE
Q 000959 972 WTKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDP-----KGVLFAGRVI 1022 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLS-klYEIVIYTAGtreYAd~VLdiLDP-----~gkLFs~RIi 1022 (1208)
.++++|++.++++.|. .-++++|.|+|...++..|++.|.. ...+++.|+.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~ 275 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM 275 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE
Confidence 3678999999999997 5799999999999999999998742 2236666654
No 245
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=32.79 E-value=15 Score=37.32 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
..+++|||+||+++.
T Consensus 2 k~iiFDlDGTL~d~~ 16 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLR 16 (263)
T ss_dssp CEEEECCBTTTEEES
T ss_pred cEEEEcCCCceeCCC
Confidence 368999999999975
No 246
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=31.37 E-value=14 Score=37.20 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=12.7
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
+.+++||||||+.|.
T Consensus 6 KaViFDlDGTL~Ds~ 20 (243)
T 4g9b_A 6 QGVIFDLDGVITDTA 20 (243)
T ss_dssp CEEEECSBTTTBCCH
T ss_pred cEEEEcCCCcccCCH
Confidence 468899999999864
No 247
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=31.33 E-value=14 Score=39.48 Aligned_cols=14 Identities=7% Similarity=0.097 Sum_probs=0.0
Q ss_pred eEEEEeCCCceeec
Q 000959 921 LCLVLDLDHTLLNS 934 (1208)
Q Consensus 921 LTLVLDLDETLIHS 934 (1208)
..+++|||+||+.+
T Consensus 22 kli~fDlDGTLld~ 35 (332)
T 1y8a_A 22 HMFFTDWEGPWILT 35 (332)
T ss_dssp CEEEECSBTTTBCC
T ss_pred eEEEEECcCCCcCc
No 248
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=37.08 E-value=10 Score=39.43 Aligned_cols=73 Identities=19% Similarity=0.301 Sum_probs=51.4
Q ss_pred EEEeccCHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHhcCCCceeeeeEEecCCCCCCCCCCCCCCccccCCCccCCC
Q 000959 972 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1050 (1208)
Q Consensus 972 yVKLRPGLdEFLeeLSkl-YEIVIYTAGtreYAd~VLdiLDP~gkLFs~RIiSRDDc~~~fdG~er~~yvKDLsrVLGrD 1050 (1208)
...+||++.++|+.|.+. |.++|.|+..+.++..+++.+.-.. +|.. ++. + .+.+=++ -++..
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~p-~------------~k~~~~~-~l~~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSN-LSP-E------------DKVRIIE-KLKQN 197 (263)
Confidence 356899999999999875 9999999999999999999886543 4543 321 1 1112222 23433
Q ss_pred -CcEEEEcCCC
Q 000959 1051 -SAVVIIDDSV 1060 (1208)
Q Consensus 1051 -srVVIIDDrp 1060 (1208)
..+++|.|+.
T Consensus 198 ~~~~~~VGD~~ 208 (263)
T 2yj3_A 198 GNKVLMIGDGV 208 (263)
Confidence 5788998875
No 249
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=30.69 E-value=18 Score=36.17 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=12.9
Q ss_pred CeEEEEeCCCceeec
Q 000959 920 KLCLVLDLDHTLLNS 934 (1208)
Q Consensus 920 KLTLVLDLDETLIHS 934 (1208)
+..+|+|||+||+.+
T Consensus 6 ~k~viFD~DGTL~d~ 20 (236)
T 2fea_A 6 KPFIICDFDGTITMN 20 (236)
T ss_dssp CEEEEECCTTTTBSS
T ss_pred CcEEEEeCCCCCCcc
Confidence 458999999999965
No 250
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=29.37 E-value=19 Score=34.69 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=11.7
Q ss_pred eEEEEeCCCceee
Q 000959 921 LCLVLDLDHTLLN 933 (1208)
Q Consensus 921 LTLVLDLDETLIH 933 (1208)
..+++|||+||+.
T Consensus 3 k~viFD~DGTL~d 15 (206)
T 1rku_A 3 EIACLDLEGVLVP 15 (206)
T ss_dssp EEEEEESBTTTBC
T ss_pred cEEEEccCCcchh
Confidence 4689999999998
No 251
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=27.47 E-value=9.2 Score=35.91 Aligned_cols=16 Identities=31% Similarity=0.407 Sum_probs=13.1
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
|+.+++|||+||+++.
T Consensus 9 k~ivifDlDGTL~d~~ 24 (201)
T 4ap9_A 9 KKVAVIDIEGTLTDFE 24 (201)
T ss_dssp SCEEEEECBTTTBCCC
T ss_pred ceeEEecccCCCcchH
Confidence 5666699999999764
No 252
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=25.86 E-value=19 Score=37.24 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 000959 920 KLCLVLDLDHTLLNSA 935 (1208)
Q Consensus 920 KLTLVLDLDETLIHSt 935 (1208)
-..+++|||+||+.+.
T Consensus 10 ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 10 VTVILLDIEGTTTPIA 25 (261)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEecCCCccchh
Confidence 4589999999999874
No 253
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=23.39 E-value=24 Score=36.92 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=0.0
Q ss_pred EEEEeCCCceeec
Q 000959 922 CLVLDLDHTLLNS 934 (1208)
Q Consensus 922 TLVLDLDETLIHS 934 (1208)
.+++|||+||+.+
T Consensus 33 aviFDlDGTLvDs 45 (253)
T 2g80_A 33 TYLLDIEGTVCPI 45 (253)
T ss_dssp EEEECCBTTTBCT
T ss_pred EEEEcCCCCcccc
No 254
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=21.94 E-value=51 Score=30.24 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=36.8
Q ss_pred ccCHHHHHHHhhcccEEEEEcCC-----cHHHHHHHHHHhcCCCceee
Q 000959 976 RPGIWTFLERASKLFEMHLYTMG-----NKLYATEMAKVLDPKGVLFA 1018 (1208)
Q Consensus 976 RPGLdEFLeeLSklYEIVIYTAG-----treYAd~VLdiLDP~gkLFs 1018 (1208)
=|.+.++++.+-+...|+|||.+ .=.|+..+.++|+-.|.-|.
T Consensus 4 s~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~ 51 (109)
T 3ipz_A 4 TPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFE 51 (109)
T ss_dssp CHHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCE
T ss_pred CHHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcE
Confidence 36678999999999999999998 68899999999998775444
No 255
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=20.88 E-value=35 Score=35.64 Aligned_cols=15 Identities=20% Similarity=0.297 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 000959 921 LCLVLDLDHTLLNSA 935 (1208)
Q Consensus 921 LTLVLDLDETLIHSt 935 (1208)
.++++|+|+||+.+.
T Consensus 33 ~~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 33 TAVIFDKTGTLTKGK 47 (287)
T ss_dssp CEEEEECCCCCBCSC
T ss_pred CEEEEeCCCCCcCCC
Confidence 479999999999885
Done!