Query 000968
Match_columns 1207
No_of_seqs 420 out of 2785
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 03:59:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l9w_A Glutathione-regulated p 99.9 3.6E-24 1.2E-28 251.1 19.4 163 1009-1171 4-166 (413)
2 3fwz_A Inner membrane protein 99.9 9.8E-22 3.3E-26 196.5 14.5 137 1005-1141 3-139 (140)
3 1zcd_A Na(+)/H(+) antiporter 1 99.8 4.3E-20 1.5E-24 213.3 15.2 296 653-982 60-382 (388)
4 4gx0_A TRKA domain protein; me 99.8 1.5E-19 5.2E-24 219.2 19.6 137 1005-1143 123-260 (565)
5 1lnq_A MTHK channels, potassiu 99.8 5.5E-20 1.9E-24 209.0 6.1 132 1009-1142 115-246 (336)
6 1id1_A Putative potassium chan 99.8 1.7E-18 5.9E-23 175.0 13.9 142 1009-1151 3-148 (153)
7 3llv_A Exopolyphosphatase-rela 99.8 4.4E-18 1.5E-22 169.1 14.6 132 1010-1142 7-138 (141)
8 3c85_A Putative glutathione-re 99.7 1.2E-17 4.2E-22 173.2 15.4 140 1007-1146 37-178 (183)
9 2aef_A Calcium-gated potassium 99.7 2.9E-18 1E-22 184.9 9.0 134 1007-1142 7-140 (234)
10 3l4b_C TRKA K+ channel protien 99.7 3E-17 1E-21 175.2 10.9 132 1011-1142 2-134 (218)
11 4gx0_A TRKA domain protein; me 99.7 3.5E-17 1.2E-21 198.5 9.3 128 1010-1141 349-476 (565)
12 4g65_A TRK system potassium up 99.7 4.4E-17 1.5E-21 193.7 9.4 131 1011-1141 5-142 (461)
13 2hmt_A YUAA protein; RCK, KTN, 99.6 2.8E-14 9.5E-19 140.2 14.5 133 1010-1143 7-140 (144)
14 2g1u_A Hypothetical protein TM 99.5 3.8E-14 1.3E-18 143.5 12.2 133 1007-1140 17-150 (155)
15 1lss_A TRK system potassium up 99.5 5.2E-14 1.8E-18 137.8 11.9 131 1011-1142 6-137 (140)
16 4g65_A TRK system potassium up 99.5 5.2E-14 1.8E-18 167.3 12.3 132 1009-1142 235-368 (461)
17 3naf_A Calcium-activated potas 99.3 2.2E-12 7.7E-17 160.1 9.8 137 1006-1142 50-212 (798)
18 3mt5_A Potassium large conduct 99.2 7.2E-12 2.5E-16 154.1 9.5 134 1009-1142 3-162 (726)
19 4hpf_A Potassium channel subfa 98.8 2.4E-09 8E-14 134.0 7.8 133 1009-1142 3-162 (722)
20 3ic5_A Putative saccharopine d 97.7 0.00018 6.2E-09 67.6 10.9 103 1010-1116 6-109 (118)
21 3zux_A Transporter, ASBTNM; tr 97.7 0.016 5.5E-07 66.1 28.6 102 655-764 43-150 (332)
22 1kyq_A Met8P, siroheme biosynt 96.9 0.0012 4E-08 73.5 6.9 146 1010-1159 14-205 (274)
23 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.0047 1.6E-07 66.7 7.4 140 1010-1160 32-182 (223)
24 1hdo_A Biliverdin IX beta redu 95.9 0.013 4.6E-07 59.9 7.8 72 1011-1083 5-77 (206)
25 1pjq_A CYSG, siroheme synthase 95.6 0.029 9.9E-07 66.6 10.1 94 1010-1112 13-108 (457)
26 1leh_A Leucine dehydrogenase; 95.5 0.025 8.5E-07 65.4 8.7 135 1010-1158 174-314 (364)
27 3g0o_A 3-hydroxyisobutyrate de 95.5 0.036 1.2E-06 61.7 9.6 71 1010-1087 8-78 (303)
28 3ktd_A Prephenate dehydrogenas 95.4 0.037 1.3E-06 63.3 9.5 93 1009-1107 8-100 (341)
29 2jl1_A Triphenylmethane reduct 95.3 0.03 1E-06 60.7 8.1 72 1011-1083 2-76 (287)
30 2h78_A Hibadh, 3-hydroxyisobut 95.3 0.064 2.2E-06 59.4 10.8 105 1011-1124 5-119 (302)
31 3pef_A 6-phosphogluconate dehy 95.3 0.055 1.9E-06 59.6 10.2 105 1011-1124 3-117 (287)
32 3qha_A Putative oxidoreductase 95.2 0.052 1.8E-06 60.4 9.9 89 1010-1108 16-105 (296)
33 2ew2_A 2-dehydropantoate 2-red 95.2 0.017 5.7E-07 63.7 5.7 104 1011-1116 5-117 (316)
34 1qyd_A Pinoresinol-lariciresin 95.2 0.063 2.2E-06 58.9 10.3 88 1010-1098 5-107 (313)
35 3ius_A Uncharacterized conserv 95.2 0.028 9.7E-07 61.0 7.4 68 1010-1083 6-73 (286)
36 3doj_A AT3G25530, dehydrogenas 95.2 0.041 1.4E-06 61.6 8.8 106 1010-1124 22-137 (310)
37 4dll_A 2-hydroxy-3-oxopropiona 95.2 0.069 2.4E-06 60.1 10.7 109 1010-1126 32-148 (320)
38 2zcu_A Uncharacterized oxidore 95.2 0.04 1.4E-06 59.6 8.5 87 1012-1099 2-96 (286)
39 3e48_A Putative nucleoside-dip 95.1 0.056 1.9E-06 58.8 9.6 89 1011-1100 2-99 (289)
40 3l6d_A Putative oxidoreductase 95.1 0.072 2.5E-06 59.5 10.6 106 1010-1124 10-123 (306)
41 2r6j_A Eugenol synthase 1; phe 95.1 0.069 2.4E-06 59.0 10.4 89 1009-1098 11-106 (318)
42 2rir_A Dipicolinate synthase, 95.0 0.072 2.5E-06 59.4 10.2 113 1010-1131 158-272 (300)
43 2z2v_A Hypothetical protein PH 95.0 0.057 2E-06 62.2 9.5 112 1008-1125 15-130 (365)
44 1txg_A Glycerol-3-phosphate de 94.9 0.016 5.4E-07 64.9 4.5 95 1011-1107 2-104 (335)
45 3h2s_A Putative NADH-flavin re 94.9 0.023 7.9E-07 59.2 5.5 69 1012-1083 3-72 (224)
46 3naf_A Calcium-activated potas 94.9 0.017 6E-07 72.4 5.2 136 1006-1141 398-606 (798)
47 2gas_A Isoflavone reductase; N 94.9 0.098 3.3E-06 57.2 10.7 87 1011-1098 4-103 (307)
48 1qyc_A Phenylcoumaran benzylic 94.8 0.091 3.1E-06 57.5 10.2 88 1010-1098 5-104 (308)
49 2cvz_A Dehydrogenase, 3-hydrox 94.8 0.063 2.2E-06 58.6 8.8 67 1011-1087 3-69 (289)
50 3d4o_A Dipicolinate synthase s 94.7 0.14 4.6E-06 57.0 11.4 111 1010-1129 156-268 (293)
51 3pdu_A 3-hydroxyisobutyrate de 94.7 0.076 2.6E-06 58.5 9.3 69 1011-1087 3-71 (287)
52 1vpd_A Tartronate semialdehyde 94.7 0.095 3.2E-06 57.7 10.0 68 1011-1086 7-74 (299)
53 3i6i_A Putative leucoanthocyan 94.7 0.1 3.5E-06 58.5 10.4 88 1010-1098 11-110 (346)
54 3qvo_A NMRA family protein; st 94.7 0.042 1.4E-06 58.4 6.8 74 1010-1084 24-99 (236)
55 3cky_A 2-hydroxymethyl glutara 94.7 0.12 4.2E-06 56.9 10.8 73 1011-1091 6-78 (301)
56 3ew7_A LMO0794 protein; Q8Y8U8 94.6 0.034 1.2E-06 57.6 5.8 70 1011-1084 2-72 (221)
57 3c1o_A Eugenol synthase; pheny 94.6 0.12 4.3E-06 56.9 10.6 87 1011-1098 6-104 (321)
58 2f1k_A Prephenate dehydrogenas 94.5 0.14 4.8E-06 55.8 10.8 87 1011-1107 2-90 (279)
59 3r6d_A NAD-dependent epimerase 94.5 0.085 2.9E-06 55.1 8.5 73 1010-1083 6-83 (221)
60 4gbj_A 6-phosphogluconate dehy 94.5 0.1 3.6E-06 58.2 9.7 113 1008-1128 4-123 (297)
61 3dqp_A Oxidoreductase YLBE; al 94.4 0.063 2.1E-06 56.1 7.4 70 1011-1083 2-73 (219)
62 1hyh_A L-hicdh, L-2-hydroxyiso 94.4 0.2 6.8E-06 56.0 11.8 127 1011-1146 3-166 (309)
63 1lld_A L-lactate dehydrogenase 94.4 0.068 2.3E-06 59.7 8.0 130 1011-1147 9-169 (319)
64 4gwg_A 6-phosphogluconate dehy 94.3 0.18 6E-06 60.4 11.8 110 1011-1124 6-125 (484)
65 4e21_A 6-phosphogluconate dehy 94.3 0.18 6E-06 58.1 11.4 107 1010-1124 23-137 (358)
66 3abi_A Putative uncharacterize 94.3 0.11 3.7E-06 59.5 9.6 110 1011-1126 18-131 (365)
67 3e8x_A Putative NAD-dependent 94.3 0.091 3.1E-06 55.5 8.3 70 1011-1083 23-94 (236)
68 3vkg_A Dynein heavy chain, cyt 94.2 1.6 5.3E-05 62.7 22.4 67 265-331 2011-2077(3245)
69 1jw9_B Molybdopterin biosynthe 94.2 0.034 1.2E-06 60.6 5.0 88 1009-1098 31-146 (249)
70 1ff9_A Saccharopine reductase; 94.2 0.22 7.6E-06 58.9 12.2 112 1011-1126 5-122 (450)
71 1a5z_A L-lactate dehydrogenase 94.1 0.17 5.9E-06 57.0 10.7 129 1011-1147 2-161 (319)
72 2wm3_A NMRA-like family domain 94.1 0.054 1.8E-06 59.3 6.2 72 1010-1082 6-81 (299)
73 3d1l_A Putative NADP oxidoredu 94.1 0.075 2.6E-06 57.6 7.3 88 1011-1108 12-102 (266)
74 3ggo_A Prephenate dehydrogenas 94.0 0.14 4.6E-06 57.8 9.3 91 1010-1108 34-128 (314)
75 3dhn_A NAD-dependent epimerase 93.9 0.061 2.1E-06 56.2 6.0 71 1011-1083 6-77 (227)
76 2g5c_A Prephenate dehydrogenas 93.7 0.11 3.9E-06 56.7 7.8 87 1011-1106 3-94 (281)
77 2vns_A Metalloreductase steap3 93.6 0.073 2.5E-06 56.4 6.0 66 1010-1084 29-94 (215)
78 2eez_A Alanine dehydrogenase; 93.6 0.064 2.2E-06 61.7 5.9 98 1010-1109 167-268 (369)
79 3obb_A Probable 3-hydroxyisobu 93.6 0.18 6.3E-06 56.5 9.4 108 1011-1127 5-122 (300)
80 3vkg_A Dynein heavy chain, cyt 93.5 0.89 3.1E-05 65.1 18.0 62 263-324 2016-2077(3245)
81 1i36_A Conserved hypothetical 93.5 0.17 5.7E-06 54.8 8.8 66 1011-1086 2-69 (264)
82 2p4q_A 6-phosphogluconate dehy 93.5 0.37 1.3E-05 57.8 12.5 114 1007-1124 8-131 (497)
83 2v6b_A L-LDH, L-lactate dehydr 93.5 0.48 1.6E-05 53.0 12.7 130 1011-1148 2-160 (304)
84 2gf2_A Hibadh, 3-hydroxyisobut 93.4 0.13 4.4E-06 56.5 7.8 69 1011-1087 2-70 (296)
85 1bg6_A N-(1-D-carboxylethyl)-L 93.4 0.16 5.4E-06 57.2 8.7 91 1011-1106 6-108 (359)
86 2we8_A Xanthine dehydrogenase; 93.4 0.088 3E-06 61.2 6.7 113 1008-1122 203-323 (386)
87 2x4g_A Nucleoside-diphosphate- 93.3 0.072 2.5E-06 59.1 5.6 71 1011-1082 15-86 (342)
88 4ina_A Saccharopine dehydrogen 93.2 0.11 3.9E-06 60.4 7.3 118 1011-1132 3-145 (405)
89 1yb4_A Tartronic semialdehyde 93.2 0.1 3.6E-06 57.2 6.6 67 1011-1086 5-71 (295)
90 2uyy_A N-PAC protein; long-cha 93.2 0.16 5.6E-06 56.5 8.2 72 1010-1090 31-103 (316)
91 3ego_A Probable 2-dehydropanto 93.1 0.082 2.8E-06 59.2 5.6 110 1011-1124 4-117 (307)
92 4ezb_A Uncharacterized conserv 93.1 0.18 6.2E-06 56.7 8.4 68 1010-1087 25-101 (317)
93 1mv8_A GMD, GDP-mannose 6-dehy 93.0 0.17 5.8E-06 59.5 8.3 71 1011-1085 2-88 (436)
94 3n58_A Adenosylhomocysteinase; 92.9 0.086 2.9E-06 62.3 5.5 85 1010-1105 248-332 (464)
95 3c24_A Putative oxidoreductase 92.9 0.12 4.2E-06 56.8 6.5 66 1011-1085 13-79 (286)
96 3ce6_A Adenosylhomocysteinase; 92.8 0.14 4.8E-06 61.4 7.4 88 1010-1108 275-362 (494)
97 2akf_A Coronin-1A; coiled coil 92.8 0.094 3.2E-06 38.3 3.5 26 286-311 3-28 (32)
98 3on5_A BH1974 protein; structu 92.7 0.25 8.5E-06 57.0 8.9 110 1008-1121 198-308 (362)
99 3tri_A Pyrroline-5-carboxylate 92.7 0.35 1.2E-05 53.4 9.9 86 1011-1106 5-96 (280)
100 1xgk_A Nitrogen metabolite rep 92.5 0.33 1.1E-05 55.1 9.6 88 1010-1098 6-103 (352)
101 3gt0_A Pyrroline-5-carboxylate 92.5 0.2 6.8E-06 53.9 7.4 65 1011-1084 4-74 (247)
102 2y0c_A BCEC, UDP-glucose dehyd 92.4 0.25 8.6E-06 58.9 8.9 73 1010-1084 9-95 (478)
103 2ahr_A Putative pyrroline carb 92.4 0.27 9.2E-06 53.0 8.3 66 1011-1084 5-71 (259)
104 3b1f_A Putative prephenate deh 92.2 0.24 8.3E-06 54.3 7.9 88 1011-1107 8-100 (290)
105 2zyd_A 6-phosphogluconate dehy 92.2 0.43 1.5E-05 57.0 10.5 93 1009-1108 15-113 (480)
106 1xq6_A Unknown protein; struct 92.2 0.23 7.9E-06 52.2 7.3 70 1011-1082 6-78 (253)
107 1np3_A Ketol-acid reductoisome 92.1 0.21 7.2E-06 56.7 7.3 67 1011-1086 18-85 (338)
108 3gpi_A NAD-dependent epimerase 92.1 0.11 3.6E-06 56.6 4.7 67 1011-1081 5-71 (286)
109 1guz_A Malate dehydrogenase; o 92.0 0.61 2.1E-05 52.3 10.8 128 1011-1144 2-160 (310)
110 4id9_A Short-chain dehydrogena 91.9 0.43 1.5E-05 53.1 9.5 66 1009-1081 19-85 (347)
111 1smk_A Malate dehydrogenase, g 91.9 0.8 2.8E-05 51.8 11.7 133 1011-1146 10-172 (326)
112 4hpf_A Potassium channel subfa 91.8 0.27 9.4E-06 61.5 8.5 116 1005-1120 381-529 (722)
113 4huj_A Uncharacterized protein 91.8 0.47 1.6E-05 50.2 9.2 66 1011-1084 25-92 (220)
114 3gg2_A Sugar dehydrogenase, UD 91.8 0.17 6E-06 59.8 6.4 73 1011-1085 4-90 (450)
115 2qyt_A 2-dehydropantoate 2-red 91.7 0.17 5.9E-06 55.9 6.0 99 1011-1116 10-126 (317)
116 1dlj_A UDP-glucose dehydrogena 91.7 0.5 1.7E-05 54.9 10.0 100 1011-1116 2-127 (402)
117 3qsg_A NAD-binding phosphogluc 91.6 0.3 1E-05 54.6 7.9 67 1010-1085 25-95 (312)
118 3pqe_A L-LDH, L-lactate dehydr 91.6 1.1 3.6E-05 51.0 12.3 129 1010-1147 6-167 (326)
119 3m2p_A UDP-N-acetylglucosamine 91.6 0.48 1.7E-05 52.0 9.3 68 1010-1082 3-71 (311)
120 2pgd_A 6-phosphogluconate dehy 91.5 0.61 2.1E-05 55.6 10.6 90 1011-1107 4-100 (482)
121 3hn2_A 2-dehydropantoate 2-red 91.4 0.57 2E-05 52.2 9.8 99 1011-1117 4-113 (312)
122 1i84_S Smooth muscle myosin he 91.4 0.49 1.7E-05 62.5 10.6 18 150-167 859-876 (1184)
123 3h9u_A Adenosylhomocysteinase; 91.4 0.18 6.2E-06 59.4 5.8 65 1010-1083 212-276 (436)
124 3hwr_A 2-dehydropantoate 2-red 91.3 0.34 1.2E-05 54.3 7.9 109 1009-1125 19-138 (318)
125 1yqg_A Pyrroline-5-carboxylate 91.3 0.19 6.7E-06 54.1 5.7 63 1011-1082 2-66 (263)
126 2axq_A Saccharopine dehydrogen 91.3 0.28 9.6E-06 58.4 7.5 112 1010-1125 24-141 (467)
127 3d64_A Adenosylhomocysteinase; 91.3 0.16 5.4E-06 60.9 5.3 84 1010-1104 278-361 (494)
128 1wwk_A Phosphoglycerate dehydr 91.2 0.54 1.8E-05 52.8 9.4 86 1010-1105 143-230 (307)
129 3ojo_A CAP5O; rossmann fold, c 91.2 0.61 2.1E-05 55.0 10.2 73 1011-1085 13-95 (431)
130 2qxy_A Response regulator; reg 91.2 2.7 9.2E-05 39.8 13.1 96 1032-1129 4-106 (142)
131 2izz_A Pyrroline-5-carboxylate 91.2 0.55 1.9E-05 52.8 9.4 87 1011-1107 24-117 (322)
132 2iz1_A 6-phosphogluconate dehy 91.1 0.68 2.3E-05 55.0 10.6 93 1010-1107 6-102 (474)
133 1ks9_A KPA reductase;, 2-dehyd 91.1 0.095 3.2E-06 57.0 3.0 93 1011-1109 2-99 (291)
134 3eod_A Protein HNR; response r 91.0 1.4 4.7E-05 41.2 10.6 96 1033-1129 8-110 (130)
135 2c5a_A GDP-mannose-3', 5'-epim 90.9 0.38 1.3E-05 54.7 7.9 72 1010-1082 30-102 (379)
136 3gvp_A Adenosylhomocysteinase 90.9 0.18 6E-06 59.4 5.1 65 1010-1083 221-285 (435)
137 3orq_A N5-carboxyaminoimidazol 90.8 0.24 8.2E-06 56.9 6.1 109 1009-1122 12-124 (377)
138 2bka_A CC3, TAT-interacting pr 90.7 0.097 3.3E-06 55.2 2.5 72 1011-1083 20-94 (242)
139 3oj0_A Glutr, glutamyl-tRNA re 90.7 0.14 4.8E-06 50.4 3.5 71 1009-1085 21-92 (144)
140 1c1g_A Tropomyosin; contractIl 90.7 18 0.0006 37.8 26.3 41 273-313 109-149 (284)
141 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.7 0.63 2.1E-05 55.4 9.8 92 1011-1106 3-101 (478)
142 3p2y_A Alanine dehydrogenase/p 90.7 0.11 3.8E-06 60.2 3.2 120 1009-1129 184-331 (381)
143 3dtt_A NADP oxidoreductase; st 90.6 0.31 1.1E-05 52.5 6.4 71 1009-1087 19-104 (245)
144 2raf_A Putative dinucleotide-b 90.5 0.3 1E-05 51.5 6.1 34 1010-1043 20-53 (209)
145 1v8b_A Adenosylhomocysteinase; 90.5 0.27 9.2E-06 58.7 6.2 98 1010-1118 258-357 (479)
146 3hdg_A Uncharacterized protein 90.4 1.9 6.5E-05 40.6 11.1 98 1031-1129 6-110 (137)
147 3ruf_A WBGU; rossmann fold, UD 90.4 0.98 3.4E-05 50.2 10.5 73 1010-1083 26-110 (351)
148 1i84_S Smooth muscle myosin he 90.4 0.24 8.3E-06 65.4 6.3 31 149-179 865-895 (1184)
149 1y7t_A Malate dehydrogenase; N 90.1 1.1 3.9E-05 50.2 10.7 97 1011-1109 6-132 (327)
150 2qv0_A Protein MRKE; structura 90.1 1.9 6.6E-05 40.8 11.0 99 1031-1129 8-112 (143)
151 4e12_A Diketoreductase; oxidor 90.1 0.77 2.6E-05 50.5 9.1 41 1010-1050 5-45 (283)
152 3to5_A CHEY homolog; alpha(5)b 90.1 1.5 5E-05 43.3 10.2 109 1021-1129 1-118 (134)
153 3e18_A Oxidoreductase; dehydro 90.0 0.86 2.9E-05 51.9 9.7 123 1010-1141 6-139 (359)
154 1c1d_A L-phenylalanine dehydro 89.9 1.5 5E-05 50.5 11.5 134 1010-1158 176-316 (355)
155 3hzh_A Chemotaxis response reg 89.9 1.5 5.3E-05 42.7 10.3 57 1073-1129 83-142 (157)
156 1cyd_A Carbonyl reductase; sho 89.8 0.45 1.5E-05 50.2 6.8 72 1011-1082 9-85 (244)
157 3vku_A L-LDH, L-lactate dehydr 89.8 1.3 4.3E-05 50.4 10.8 130 1009-1147 9-170 (326)
158 3k96_A Glycerol-3-phosphate de 89.7 0.48 1.6E-05 54.3 7.4 91 1010-1105 30-131 (356)
159 2d5c_A AROE, shikimate 5-dehyd 89.7 0.26 8.9E-06 53.7 4.9 104 1011-1125 118-226 (263)
160 2o3j_A UDP-glucose 6-dehydroge 89.7 0.6 2.1E-05 55.6 8.4 73 1011-1085 11-98 (481)
161 2vhw_A Alanine dehydrogenase; 89.6 0.26 8.8E-06 56.9 5.0 97 1009-1107 168-268 (377)
162 1mld_A Malate dehydrogenase; o 89.5 0.76 2.6E-05 51.7 8.7 131 1011-1146 2-164 (314)
163 1b8p_A Protein (malate dehydro 89.5 0.83 2.8E-05 51.6 9.0 134 1011-1147 7-178 (329)
164 3ko8_A NAD-dependent epimerase 89.4 0.34 1.2E-05 53.0 5.6 69 1011-1082 2-71 (312)
165 2efr_A General control protein 89.4 7.6 0.00026 39.6 14.9 111 184-309 43-153 (155)
166 3eag_A UDP-N-acetylmuramate:L- 89.3 0.61 2.1E-05 52.6 7.8 82 1010-1097 5-89 (326)
167 1zej_A HBD-9, 3-hydroxyacyl-CO 89.3 0.56 1.9E-05 52.5 7.3 42 1009-1051 12-53 (293)
168 1lu9_A Methylene tetrahydromet 89.2 0.47 1.6E-05 52.3 6.6 72 1010-1082 120-197 (287)
169 2zqz_A L-LDH, L-lactate dehydr 89.2 2.4 8.2E-05 48.0 12.5 131 1009-1147 9-170 (326)
170 2gcg_A Glyoxylate reductase/hy 89.2 0.29 9.9E-06 55.5 4.9 86 1010-1104 156-243 (330)
171 2g76_A 3-PGDH, D-3-phosphoglyc 89.0 0.91 3.1E-05 51.7 8.9 85 1010-1104 166-252 (335)
172 2zay_A Response regulator rece 89.0 1.2 4.1E-05 42.5 8.6 96 1033-1129 9-113 (147)
173 1pzg_A LDH, lactate dehydrogen 88.9 0.39 1.3E-05 54.5 5.8 96 1010-1111 10-136 (331)
174 1z82_A Glycerol-3-phosphate de 88.9 0.48 1.7E-05 53.3 6.5 69 1007-1083 12-90 (335)
175 3lk7_A UDP-N-acetylmuramoylala 88.9 0.53 1.8E-05 55.5 7.1 75 1010-1090 10-89 (451)
176 3d3w_A L-xylulose reductase; u 88.9 0.56 1.9E-05 49.5 6.7 73 1010-1082 8-85 (244)
177 2ewd_A Lactate dehydrogenase,; 88.8 1 3.4E-05 50.5 9.0 128 1010-1144 5-163 (317)
178 1y1p_A ARII, aldehyde reductas 88.8 0.3 1E-05 53.9 4.7 72 1010-1082 12-92 (342)
179 4dio_A NAD(P) transhydrogenase 88.8 0.32 1.1E-05 56.9 5.0 100 1009-1109 190-314 (405)
180 3vtf_A UDP-glucose 6-dehydroge 88.7 0.6 2E-05 55.3 7.3 73 1010-1084 22-108 (444)
181 3f6c_A Positive transcription 88.7 1.2 4.2E-05 41.7 8.3 94 1034-1127 3-103 (134)
182 1y6j_A L-lactate dehydrogenase 88.7 1.3 4.6E-05 49.8 9.9 131 1010-1148 8-169 (318)
183 2w2k_A D-mandelate dehydrogena 88.7 0.33 1.1E-05 55.5 4.9 87 1010-1104 164-253 (348)
184 3d0o_A L-LDH 1, L-lactate dehy 88.7 2.5 8.5E-05 47.5 12.1 129 1010-1147 7-168 (317)
185 3ezy_A Dehydrogenase; structur 88.4 1.1 3.7E-05 50.5 9.0 123 1011-1141 4-138 (344)
186 3jte_A Response regulator rece 88.4 4.6 0.00016 38.2 12.2 96 1033-1129 4-108 (143)
187 1jay_A Coenzyme F420H2:NADP+ o 88.4 0.49 1.7E-05 49.2 5.7 68 1011-1085 2-76 (212)
188 3sxp_A ADP-L-glycero-D-mannohe 88.3 0.4 1.4E-05 53.9 5.4 72 1011-1082 12-99 (362)
189 3jtm_A Formate dehydrogenase, 88.2 0.35 1.2E-05 55.5 4.8 90 1010-1107 165-256 (351)
190 3bio_A Oxidoreductase, GFO/IDH 88.2 0.64 2.2E-05 51.9 6.8 118 1010-1140 10-137 (304)
191 1ur5_A Malate dehydrogenase; o 88.1 2.1 7.3E-05 47.9 11.1 128 1010-1145 3-162 (309)
192 2hjr_A Malate dehydrogenase; m 88.1 1.9 6.4E-05 48.8 10.7 130 1010-1146 15-175 (328)
193 3ghy_A Ketopantoate reductase 88.1 0.46 1.6E-05 53.6 5.6 68 1011-1084 5-81 (335)
194 3h8v_A Ubiquitin-like modifier 88.1 1.8 6.1E-05 48.5 10.3 113 1009-1145 36-163 (292)
195 3q2o_A Phosphoribosylaminoimid 88.1 0.88 3E-05 52.2 8.1 108 1010-1122 15-126 (389)
196 3kht_A Response regulator; PSI 88.0 4.2 0.00014 38.6 11.7 97 1032-1128 5-111 (144)
197 1ez4_A Lactate dehydrogenase; 88.0 3.1 0.0001 46.9 12.3 128 1010-1146 6-165 (318)
198 2rcy_A Pyrroline carboxylate r 88.0 1.1 3.9E-05 48.0 8.5 84 1011-1109 6-93 (262)
199 1tmy_A CHEY protein, TMY; chem 87.9 3.9 0.00013 37.3 11.0 97 1033-1129 3-106 (120)
200 2q3e_A UDP-glucose 6-dehydroge 87.8 0.69 2.4E-05 54.8 7.2 73 1011-1085 7-94 (467)
201 2qr3_A Two-component system re 87.7 3.3 0.00011 38.8 10.7 95 1033-1128 4-110 (140)
202 3u62_A Shikimate dehydrogenase 87.7 0.96 3.3E-05 49.5 7.7 131 1011-1152 110-246 (253)
203 3cz5_A Two-component response 87.7 3.6 0.00012 39.6 11.1 97 1032-1128 5-109 (153)
204 2gn4_A FLAA1 protein, UDP-GLCN 87.7 0.57 2E-05 52.8 6.1 72 1010-1082 22-100 (344)
205 3pid_A UDP-glucose 6-dehydroge 87.6 0.58 2E-05 55.2 6.2 71 1011-1084 38-120 (432)
206 3u59_A Tropomyosin beta chain; 87.5 2.2 7.5E-05 40.3 9.0 60 270-329 25-91 (101)
207 3cnb_A DNA-binding response re 87.3 5.2 0.00018 37.5 11.8 98 1032-1129 8-115 (143)
208 1sb8_A WBPP; epimerase, 4-epim 87.3 0.7 2.4E-05 51.6 6.5 71 1011-1082 29-111 (352)
209 2ekl_A D-3-phosphoglycerate de 87.3 0.4 1.4E-05 54.1 4.5 85 1010-1104 143-229 (313)
210 2dbq_A Glyoxylate reductase; D 87.3 0.56 1.9E-05 53.3 5.7 85 1010-1104 151-237 (334)
211 4e4t_A Phosphoribosylaminoimid 87.3 0.45 1.5E-05 55.6 5.0 109 1009-1122 35-147 (419)
212 3o38_A Short chain dehydrogena 87.2 0.52 1.8E-05 50.7 5.2 73 1010-1082 23-110 (266)
213 1f0y_A HCDH, L-3-hydroxyacyl-C 87.2 1.7 5.8E-05 48.0 9.5 39 1010-1048 16-54 (302)
214 1ldn_A L-lactate dehydrogenase 87.2 3.3 0.00011 46.5 11.9 130 1010-1147 7-168 (316)
215 2pi1_A D-lactate dehydrogenase 87.2 0.91 3.1E-05 51.7 7.4 89 1007-1106 138-229 (334)
216 1oc2_A DTDP-glucose 4,6-dehydr 87.1 1.1 3.6E-05 49.8 7.8 72 1011-1083 6-85 (348)
217 2j6i_A Formate dehydrogenase; 87.0 0.47 1.6E-05 54.6 4.9 89 1010-1106 165-256 (364)
218 2dpo_A L-gulonate 3-dehydrogen 87.0 0.93 3.2E-05 51.2 7.3 40 1010-1049 7-46 (319)
219 3uuw_A Putative oxidoreductase 87.0 1.3 4.6E-05 48.9 8.5 119 1010-1139 7-138 (308)
220 3p7m_A Malate dehydrogenase; p 86.9 1.9 6.6E-05 48.7 9.8 92 1010-1108 6-123 (321)
221 3gt7_A Sensor protein; structu 86.8 6 0.0002 38.3 12.2 98 1031-1129 6-112 (154)
222 3i83_A 2-dehydropantoate 2-red 86.8 0.72 2.5E-05 51.6 6.2 99 1011-1116 4-114 (320)
223 3rc1_A Sugar 3-ketoreductase; 86.8 0.96 3.3E-05 51.3 7.4 123 1010-1141 28-163 (350)
224 1tlt_A Putative oxidoreductase 86.7 1.5 5.1E-05 48.8 8.8 119 1011-1140 7-138 (319)
225 3kkj_A Amine oxidase, flavin-c 86.7 0.4 1.4E-05 48.6 3.7 33 1011-1043 4-36 (336)
226 2pv7_A T-protein [includes: ch 86.6 0.97 3.3E-05 50.1 7.1 34 1010-1043 22-56 (298)
227 1p9l_A Dihydrodipicolinate red 86.6 2.5 8.6E-05 46.0 10.2 106 1011-1141 2-117 (245)
228 1l7d_A Nicotinamide nucleotide 86.5 0.44 1.5E-05 55.1 4.3 99 1009-1108 172-295 (384)
229 2glx_A 1,5-anhydro-D-fructose 86.5 1 3.5E-05 50.2 7.2 122 1011-1141 2-136 (332)
230 1x13_A NAD(P) transhydrogenase 86.4 0.45 1.6E-05 55.4 4.4 99 1009-1108 172-293 (401)
231 3gvi_A Malate dehydrogenase; N 86.3 1.8 6.2E-05 49.1 9.2 91 1010-1108 8-125 (324)
232 1qkk_A DCTD, C4-dicarboxylate 86.3 7.4 0.00025 37.4 12.5 96 1033-1129 4-106 (155)
233 3slg_A PBGP3 protein; structur 86.3 0.74 2.5E-05 51.8 6.0 71 1010-1081 25-99 (372)
234 4a7p_A UDP-glucose dehydrogena 86.1 1.1 3.9E-05 52.9 7.7 75 1009-1085 8-96 (446)
235 3pp8_A Glyoxylate/hydroxypyruv 86.1 1.3 4.6E-05 49.9 7.9 85 1010-1104 140-226 (315)
236 3euw_A MYO-inositol dehydrogen 86.1 2.2 7.5E-05 47.9 9.8 122 1011-1141 6-139 (344)
237 3tl2_A Malate dehydrogenase; c 86.0 4.8 0.00016 45.4 12.4 93 1010-1109 9-129 (315)
238 3kto_A Response regulator rece 85.9 3.6 0.00012 38.8 9.9 96 1033-1129 7-111 (136)
239 4e7p_A Response regulator; DNA 85.9 3.9 0.00013 39.3 10.2 97 1033-1129 21-125 (150)
240 1zcj_A Peroxisomal bifunctiona 85.9 2.1 7.1E-05 50.7 9.8 69 1010-1085 38-126 (463)
241 2d4a_B Malate dehydrogenase; a 85.8 4.7 0.00016 45.2 12.2 128 1011-1146 1-160 (308)
242 2xxj_A L-LDH, L-lactate dehydr 85.8 3.1 0.00011 46.6 10.7 128 1011-1147 2-161 (310)
243 1t2d_A LDH-P, L-lactate dehydr 85.7 2.7 9.4E-05 47.4 10.3 130 1010-1146 5-170 (322)
244 3e9m_A Oxidoreductase, GFO/IDH 85.7 1.5 5E-05 49.2 8.1 124 1010-1141 6-141 (330)
245 2rjn_A Response regulator rece 85.7 6.9 0.00024 37.6 11.9 97 1032-1129 7-111 (154)
246 4g2n_A D-isomer specific 2-hyd 85.6 0.61 2.1E-05 53.4 4.9 86 1010-1105 174-261 (345)
247 3hv2_A Response regulator/HD d 85.6 6.9 0.00024 37.6 11.9 65 1065-1129 50-118 (153)
248 3q2i_A Dehydrogenase; rossmann 85.6 2 6.9E-05 48.5 9.2 124 1009-1141 13-149 (354)
249 2pk3_A GDP-6-deoxy-D-LYXO-4-he 85.5 1.1 3.9E-05 49.0 6.9 69 1010-1082 13-83 (321)
250 3db2_A Putative NADPH-dependen 85.4 2.2 7.4E-05 48.2 9.3 123 1010-1141 6-140 (354)
251 3cea_A MYO-inositol 2-dehydrog 85.4 2.3 8E-05 47.6 9.5 124 1010-1141 9-146 (346)
252 3lua_A Response regulator rece 85.3 4.8 0.00016 38.0 10.4 96 1032-1128 4-111 (140)
253 1ek6_A UDP-galactose 4-epimera 85.3 2.7 9.2E-05 46.5 9.9 73 1010-1082 3-90 (348)
254 2ho3_A Oxidoreductase, GFO/IDH 85.3 2.7 9.1E-05 46.8 9.9 122 1011-1141 3-136 (325)
255 2i6t_A Ubiquitin-conjugating e 85.2 1.9 6.7E-05 48.3 8.7 134 1010-1149 15-172 (303)
256 4hkt_A Inositol 2-dehydrogenas 85.2 2.5 8.6E-05 47.2 9.6 123 1010-1142 4-138 (331)
257 3u1c_A Tropomyosin alpha-1 cha 85.1 3.5 0.00012 39.0 9.0 59 271-329 26-91 (101)
258 4aj2_A L-lactate dehydrogenase 85.1 4.9 0.00017 45.7 12.0 133 1009-1148 19-182 (331)
259 3evt_A Phosphoglycerate dehydr 85.0 2.5 8.5E-05 47.9 9.5 88 1010-1107 138-227 (324)
260 3p19_A BFPVVD8, putative blue 85.0 0.9 3.1E-05 49.4 5.7 73 1010-1082 17-96 (266)
261 2pzm_A Putative nucleotide sug 85.0 1.4 4.6E-05 49.0 7.3 71 1011-1082 22-97 (330)
262 3ldh_A Lactate dehydrogenase; 85.0 6.3 0.00022 44.8 12.8 134 1008-1148 20-184 (330)
263 4e5n_A Thermostable phosphite 85.0 0.9 3.1E-05 51.6 5.9 88 1010-1106 146-235 (330)
264 3njr_A Precorrin-6Y methylase; 84.9 3 0.0001 43.4 9.5 93 1011-1113 58-160 (204)
265 1gdh_A D-glycerate dehydrogena 84.9 0.71 2.4E-05 52.2 5.0 85 1010-1104 147-235 (320)
266 3ohs_X Trans-1,2-dihydrobenzen 84.7 2.6 8.7E-05 47.3 9.4 123 1011-1141 4-140 (334)
267 4hv4_A UDP-N-acetylmuramate--L 84.7 0.82 2.8E-05 54.6 5.6 74 1010-1090 23-98 (494)
268 1jbe_A Chemotaxis protein CHEY 84.7 14 0.00047 34.0 13.1 98 1032-1129 4-110 (128)
269 3nep_X Malate dehydrogenase; h 84.7 2.1 7.2E-05 48.3 8.6 93 1011-1111 2-121 (314)
270 2ag5_A DHRS6, dehydrogenase/re 84.6 1.1 3.9E-05 47.6 6.2 71 1011-1081 8-82 (246)
271 2a35_A Hypothetical protein PA 84.6 0.49 1.7E-05 48.7 3.2 67 1010-1083 6-75 (215)
272 3oz2_A Digeranylgeranylglycero 84.5 0.35 1.2E-05 54.0 2.3 56 1011-1073 6-61 (397)
273 2yy7_A L-threonine dehydrogena 84.5 0.71 2.4E-05 50.3 4.6 71 1010-1082 3-77 (312)
274 2c20_A UDP-glucose 4-epimerase 84.5 0.59 2E-05 51.5 4.0 71 1011-1082 3-76 (330)
275 3gg9_A D-3-phosphoglycerate de 84.4 0.65 2.2E-05 53.3 4.4 103 1007-1118 157-267 (352)
276 4ffl_A PYLC; amino acid, biosy 84.4 0.63 2.2E-05 52.7 4.3 72 1011-1085 3-75 (363)
277 3ax6_A Phosphoribosylaminoimid 84.4 0.67 2.3E-05 52.8 4.5 70 1011-1083 3-72 (380)
278 3nzo_A UDP-N-acetylglucosamine 84.4 2 6.8E-05 49.6 8.5 72 1011-1082 37-121 (399)
279 3phh_A Shikimate dehydrogenase 84.3 2.4 8.4E-05 46.8 8.8 66 1009-1084 118-183 (269)
280 2bll_A Protein YFBG; decarboxy 84.2 0.44 1.5E-05 52.7 2.8 70 1011-1081 2-75 (345)
281 1eq2_A ADP-L-glycero-D-mannohe 84.0 0.9 3.1E-05 49.3 5.1 68 1012-1082 2-77 (310)
282 1dbw_A Transcriptional regulat 84.0 7.4 0.00025 35.9 10.9 96 1033-1129 4-106 (126)
283 3c1a_A Putative oxidoreductase 83.9 1.4 4.9E-05 48.9 6.9 122 1010-1141 11-143 (315)
284 1orr_A CDP-tyvelose-2-epimeras 83.9 2.7 9.2E-05 46.4 9.0 71 1011-1082 3-82 (347)
285 1pjc_A Protein (L-alanine dehy 83.9 0.5 1.7E-05 54.1 3.2 99 1010-1109 168-269 (361)
286 2d0i_A Dehydrogenase; structur 83.6 0.83 2.8E-05 51.9 4.8 80 1011-1100 148-229 (333)
287 2nac_A NAD-dependent formate d 83.6 0.75 2.6E-05 53.6 4.5 86 1011-1104 193-280 (393)
288 1uls_A Putative 3-oxoacyl-acyl 83.5 1.4 4.7E-05 47.1 6.3 72 1011-1082 7-86 (245)
289 2q1s_A Putative nucleotide sug 83.5 0.81 2.8E-05 51.8 4.7 72 1011-1083 34-109 (377)
290 3ged_A Short-chain dehydrogena 83.5 1.1 3.8E-05 48.8 5.5 71 1010-1080 3-82 (247)
291 3ond_A Adenosylhomocysteinase; 83.5 1 3.4E-05 53.9 5.6 65 1010-1083 266-330 (488)
292 1gpj_A Glutamyl-tRNA reductase 83.4 0.88 3E-05 52.9 5.0 70 1010-1085 168-239 (404)
293 1oju_A MDH, malate dehydrogena 83.2 3.1 0.00011 46.5 9.2 94 1011-1111 2-121 (294)
294 1fmc_A 7 alpha-hydroxysteroid 83.1 1 3.4E-05 47.8 4.9 73 1010-1082 12-97 (255)
295 2q1w_A Putative nucleotide sug 83.0 1.7 5.9E-05 48.2 7.0 71 1011-1082 23-98 (333)
296 3eul_A Possible nitrate/nitrit 83.0 3.3 0.00011 39.8 8.3 66 1064-1129 52-120 (152)
297 1zk4_A R-specific alcohol dehy 83.0 1.4 4.7E-05 46.7 5.9 72 1011-1082 8-91 (251)
298 2rh8_A Anthocyanidin reductase 83.0 0.47 1.6E-05 52.5 2.4 71 1010-1081 10-88 (338)
299 1evy_A Glycerol-3-phosphate de 83.0 0.6 2E-05 53.1 3.3 68 1011-1084 17-96 (366)
300 1yqd_A Sinapyl alcohol dehydro 82.9 1.8 6.3E-05 49.2 7.4 73 1010-1084 189-262 (366)
301 3tnl_A Shikimate dehydrogenase 82.9 1.4 4.9E-05 49.7 6.3 73 1010-1083 155-236 (315)
302 2c29_D Dihydroflavonol 4-reduc 82.8 0.76 2.6E-05 50.9 4.0 71 1010-1081 6-85 (337)
303 4dad_A Putative pilus assembly 82.8 12 0.00042 35.3 12.2 58 1072-1129 66-126 (146)
304 4hb9_A Similarities with proba 82.8 0.51 1.7E-05 53.2 2.7 33 1011-1043 3-35 (412)
305 3k5i_A Phosphoribosyl-aminoimi 82.8 0.69 2.3E-05 53.7 3.8 110 1009-1122 24-137 (403)
306 1pqw_A Polyketide synthase; ro 82.7 2.8 9.6E-05 42.9 8.0 92 1010-1106 40-136 (198)
307 1zud_1 Adenylyltransferase THI 82.6 1.7 5.7E-05 47.3 6.5 88 1009-1098 28-143 (251)
308 3ba1_A HPPR, hydroxyphenylpyru 82.6 1 3.5E-05 51.2 5.0 81 1011-1104 166-248 (333)
309 3ak4_A NADH-dependent quinucli 82.6 1.6 5.4E-05 46.9 6.3 72 1011-1082 14-95 (263)
310 1x0v_A GPD-C, GPDH-C, glycerol 82.6 1.1 3.6E-05 50.6 5.1 68 1011-1084 10-101 (354)
311 2z1m_A GDP-D-mannose dehydrata 82.6 1.4 4.7E-05 48.5 6.0 72 1011-1082 5-84 (345)
312 2pd6_A Estradiol 17-beta-dehyd 82.4 1.6 5.5E-05 46.5 6.3 71 1011-1081 9-100 (264)
313 3crn_A Response regulator rece 82.4 8.2 0.00028 36.1 10.6 96 1033-1129 4-106 (132)
314 2hk9_A Shikimate dehydrogenase 82.3 1.4 4.8E-05 48.4 5.9 105 1010-1122 130-237 (275)
315 3h5n_A MCCB protein; ubiquitin 82.3 2.1 7.3E-05 49.0 7.5 88 1009-1098 118-234 (353)
316 1xu9_A Corticosteroid 11-beta- 82.1 1 3.5E-05 49.1 4.6 71 1010-1080 29-113 (286)
317 3enk_A UDP-glucose 4-epimerase 82.0 1.5 5.3E-05 48.3 6.1 73 1010-1082 6-87 (341)
318 3two_A Mannitol dehydrogenase; 82.0 1.1 3.7E-05 50.6 4.9 68 1010-1084 178-245 (348)
319 2bgk_A Rhizome secoisolaricire 81.9 1.3 4.5E-05 47.6 5.4 71 1011-1081 18-100 (278)
320 3don_A Shikimate dehydrogenase 81.9 1.1 3.7E-05 49.8 4.7 107 1010-1123 118-229 (277)
321 3o8q_A Shikimate 5-dehydrogena 81.8 1.3 4.5E-05 49.1 5.4 110 1010-1126 127-243 (281)
322 2p5y_A UDP-glucose 4-epimerase 81.7 0.96 3.3E-05 49.5 4.3 71 1011-1082 2-75 (311)
323 3gl9_A Response regulator; bet 81.7 11 0.00039 34.7 11.2 95 1034-1129 4-107 (122)
324 1hxh_A 3BETA/17BETA-hydroxyste 81.6 1.2 4.2E-05 47.6 5.0 71 1011-1081 8-88 (253)
325 3g79_A NDP-N-acetyl-D-galactos 81.6 2.6 8.8E-05 50.3 8.1 74 1011-1085 20-113 (478)
326 3mt5_A Potassium large conduct 81.6 1.3 4.5E-05 55.2 5.8 114 1006-1119 374-555 (726)
327 2yxd_A Probable cobalt-precorr 81.5 2.8 9.6E-05 41.4 7.3 94 1015-1120 44-148 (183)
328 1uuf_A YAHK, zinc-type alcohol 81.5 1.9 6.7E-05 49.1 6.9 73 1010-1084 196-268 (369)
329 3gem_A Short chain dehydrogena 81.4 1.5 5.3E-05 47.4 5.7 73 1010-1082 28-108 (260)
330 3imf_A Short chain dehydrogena 81.4 1.4 4.7E-05 47.4 5.3 72 1011-1082 8-92 (257)
331 4dgs_A Dehydrogenase; structur 81.3 1.9 6.6E-05 49.2 6.6 83 1010-1105 172-256 (340)
332 3hdv_A Response regulator; PSI 81.2 6.9 0.00024 36.6 9.6 96 1033-1129 8-112 (136)
333 3mog_A Probable 3-hydroxybutyr 81.2 5.6 0.00019 47.4 10.9 90 1010-1106 6-118 (483)
334 3rqi_A Response regulator prot 81.1 7 0.00024 39.2 10.2 97 1032-1129 7-110 (184)
335 1xea_A Oxidoreductase, GFO/IDH 81.1 2 6.9E-05 47.8 6.7 122 1011-1141 4-137 (323)
336 2ph5_A Homospermidine synthase 81.1 1.3 4.5E-05 52.7 5.4 92 1006-1099 10-108 (480)
337 3zux_A Transporter, ASBTNM; tr 81.1 13 0.00044 42.1 13.3 73 872-946 43-121 (332)
338 3mm4_A Histidine kinase homolo 81.1 6.9 0.00024 40.3 10.4 57 1073-1129 119-183 (206)
339 2v6g_A Progesterone 5-beta-red 81.0 0.6 2.1E-05 52.1 2.3 71 1011-1082 3-81 (364)
340 1o6z_A MDH, malate dehydrogena 81.0 3.1 0.00011 46.4 8.2 127 1011-1146 2-163 (303)
341 3pk0_A Short-chain dehydrogena 80.8 1.9 6.5E-05 46.5 6.2 72 1011-1082 12-97 (262)
342 2yq5_A D-isomer specific 2-hyd 80.8 1.3 4.5E-05 50.6 5.1 86 1010-1107 149-236 (343)
343 3dii_A Short-chain dehydrogena 80.7 1.6 5.5E-05 46.6 5.5 71 1011-1081 4-83 (247)
344 1yb1_A 17-beta-hydroxysteroid 80.6 1.6 5.5E-05 47.2 5.5 73 1010-1082 32-117 (272)
345 4hy3_A Phosphoglycerate oxidor 80.6 1.4 4.8E-05 50.8 5.3 88 1010-1107 177-266 (365)
346 2qsj_A DNA-binding response re 80.6 6.3 0.00021 37.8 9.3 97 1033-1129 4-109 (154)
347 3rd5_A Mypaa.01249.C; ssgcid, 80.6 1.6 5.6E-05 47.7 5.6 75 1007-1081 13-94 (291)
348 2pln_A HP1043, response regula 80.5 9 0.00031 35.9 10.2 53 1072-1128 61-116 (137)
349 1kjq_A GART 2, phosphoribosylg 80.5 1.5 5E-05 50.0 5.4 110 1009-1122 11-127 (391)
350 1qsg_A Enoyl-[acyl-carrier-pro 80.4 1.8 6.3E-05 46.5 5.9 72 1010-1081 10-95 (265)
351 3gvx_A Glycerate dehydrogenase 80.4 1.4 4.9E-05 49.1 5.1 83 1010-1105 123-207 (290)
352 3aoe_E Glutamate dehydrogenase 80.3 4.7 0.00016 47.3 9.6 136 1010-1158 219-378 (419)
353 2cuk_A Glycerate dehydrogenase 80.3 0.89 3E-05 51.2 3.4 80 1010-1104 145-226 (311)
354 3fpf_A Mtnas, putative unchara 80.2 3 0.0001 46.8 7.6 95 1009-1109 123-224 (298)
355 1iy8_A Levodione reductase; ox 80.2 1.8 6.2E-05 46.6 5.7 71 1011-1081 15-100 (267)
356 3kux_A Putative oxidoreductase 80.2 6.7 0.00023 44.2 10.6 122 1010-1141 8-141 (352)
357 3snk_A Response regulator CHEY 80.1 4.9 0.00017 37.8 8.1 95 1034-1129 16-118 (135)
358 2h7i_A Enoyl-[acyl-carrier-pro 80.1 2.3 7.8E-05 45.9 6.5 72 1010-1081 8-95 (269)
359 3h5i_A Response regulator/sens 80.1 5.2 0.00018 37.9 8.4 96 1032-1129 5-109 (140)
360 2yjz_A Metalloreductase steap4 81.2 0.35 1.2E-05 50.9 0.0 64 1011-1084 21-84 (201)
361 3awd_A GOX2181, putative polyo 80.0 1.8 6.1E-05 46.0 5.5 71 1011-1081 15-98 (260)
362 3mz0_A Inositol 2-dehydrogenas 80.0 4.4 0.00015 45.5 9.1 123 1011-1141 4-141 (344)
363 4had_A Probable oxidoreductase 80.0 4.1 0.00014 45.7 8.8 123 1011-1141 25-160 (350)
364 3m2t_A Probable dehydrogenase; 80.0 4.1 0.00014 46.3 8.8 122 1011-1140 7-141 (359)
365 2wyu_A Enoyl-[acyl carrier pro 80.0 1.9 6.6E-05 46.3 5.8 72 1010-1081 9-94 (261)
366 3rft_A Uronate dehydrogenase; 79.9 0.55 1.9E-05 50.7 1.5 67 1011-1081 5-72 (267)
367 4egb_A DTDP-glucose 4,6-dehydr 79.9 2.1 7.3E-05 47.4 6.3 73 1010-1082 25-107 (346)
368 3heb_A Response regulator rece 79.8 15 0.00052 35.0 11.7 97 1032-1129 4-120 (152)
369 1hdc_A 3-alpha, 20 beta-hydrox 79.8 1.6 5.4E-05 46.8 5.1 71 1011-1081 7-87 (254)
370 2x6t_A ADP-L-glycero-D-manno-h 79.8 2 6.7E-05 48.0 6.1 72 1010-1082 47-124 (357)
371 1yzh_A TRNA (guanine-N(7)-)-me 79.8 8.3 0.00028 39.8 10.5 93 1015-1111 50-160 (214)
372 3ay3_A NAD-dependent epimerase 79.7 0.45 1.5E-05 51.1 0.7 68 1011-1082 4-72 (267)
373 3l6e_A Oxidoreductase, short-c 79.6 1.4 4.7E-05 46.9 4.5 72 1011-1082 5-86 (235)
374 3ek2_A Enoyl-(acyl-carrier-pro 79.6 2.3 7.8E-05 45.5 6.3 74 1008-1081 13-100 (271)
375 3asu_A Short-chain dehydrogena 79.6 1.6 5.4E-05 46.8 5.0 71 1011-1081 2-82 (248)
376 2z1n_A Dehydrogenase; reductas 79.5 1.7 5.8E-05 46.7 5.2 71 1011-1082 9-94 (260)
377 2p91_A Enoyl-[acyl-carrier-pro 79.5 2.4 8.1E-05 46.2 6.5 72 1010-1081 22-107 (285)
378 2dc1_A L-aspartate dehydrogena 79.5 2.7 9.3E-05 44.8 6.8 104 1011-1132 2-114 (236)
379 2dwc_A PH0318, 433AA long hypo 79.5 1.4 4.7E-05 51.2 4.8 110 1009-1122 19-135 (433)
380 3cu5_A Two component transcrip 79.4 11 0.00036 35.9 10.4 97 1033-1129 3-108 (141)
381 3ppi_A 3-hydroxyacyl-COA dehyd 79.4 1.7 5.7E-05 47.2 5.1 74 1007-1080 27-110 (281)
382 3afn_B Carbonyl reductase; alp 79.4 1.2 4.1E-05 47.2 3.9 72 1011-1082 9-94 (258)
383 2cfc_A 2-(R)-hydroxypropyl-COM 79.4 1.7 6E-05 45.8 5.2 71 1011-1081 4-88 (250)
384 2ixa_A Alpha-N-acetylgalactosa 79.4 5 0.00017 46.9 9.6 127 1010-1141 21-165 (444)
385 2pd4_A Enoyl-[acyl-carrier-pro 79.4 2.1 7.1E-05 46.4 5.9 72 1010-1081 7-92 (275)
386 3r1i_A Short-chain type dehydr 79.3 1.7 5.7E-05 47.5 5.1 75 1007-1081 29-117 (276)
387 3i1j_A Oxidoreductase, short c 79.3 3.2 0.00011 43.8 7.2 76 1007-1082 11-103 (247)
388 2egg_A AROE, shikimate 5-dehyd 79.3 2.8 9.6E-05 46.7 7.0 112 1010-1125 142-260 (297)
389 4e6p_A Probable sorbitol dehyd 79.2 1.8 6.1E-05 46.5 5.3 72 1011-1082 10-91 (259)
390 2nwq_A Probable short-chain de 79.2 1.6 5.5E-05 47.6 5.0 74 1008-1081 20-105 (272)
391 3gvc_A Oxidoreductase, probabl 79.2 1.9 6.7E-05 47.1 5.6 75 1007-1081 26-111 (277)
392 1rkx_A CDP-glucose-4,6-dehydra 79.1 1 3.5E-05 50.3 3.5 72 1011-1082 11-89 (357)
393 1n7h_A GDP-D-mannose-4,6-dehyd 79.1 1 3.4E-05 50.9 3.4 73 1010-1082 29-115 (381)
394 3cfy_A Putative LUXO repressor 79.1 15 0.00053 34.5 11.4 95 1034-1129 6-107 (137)
395 3f1l_A Uncharacterized oxidore 79.1 2.6 9E-05 45.0 6.5 75 1008-1082 10-101 (252)
396 3qy9_A DHPR, dihydrodipicolina 79.1 2.9 9.8E-05 45.5 6.8 112 1011-1141 5-121 (243)
397 4b79_A PA4098, probable short- 79.0 1.1 3.9E-05 48.7 3.6 72 1008-1079 9-84 (242)
398 4eso_A Putative oxidoreductase 78.9 1.7 5.8E-05 46.8 5.0 71 1011-1081 10-90 (255)
399 1xhl_A Short-chain dehydrogena 78.8 1.6 5.5E-05 48.2 4.8 71 1011-1081 28-114 (297)
400 1k68_A Phytochrome response re 78.8 17 0.00057 33.6 11.4 98 1032-1129 2-116 (140)
401 3fi9_A Malate dehydrogenase; s 78.7 3.9 0.00013 46.7 8.1 135 1010-1150 9-173 (343)
402 1xkq_A Short-chain reductase f 78.7 1.6 5.6E-05 47.4 4.8 71 1011-1081 8-94 (280)
403 4fgs_A Probable dehydrogenase 78.6 2.2 7.4E-05 47.2 5.8 63 1007-1069 26-93 (273)
404 3h1g_A Chemotaxis protein CHEY 78.6 11 0.00037 35.0 10.0 98 1032-1129 5-112 (129)
405 3aw8_A PURK, phosphoribosylami 78.5 2.3 7.9E-05 48.1 6.1 106 1011-1122 1-110 (369)
406 1qp8_A Formate dehydrogenase; 78.4 3.8 0.00013 45.9 7.8 81 1010-1104 125-207 (303)
407 3svt_A Short-chain type dehydr 78.3 1.6 5.5E-05 47.4 4.6 72 1011-1082 13-100 (281)
408 3qiv_A Short-chain dehydrogena 78.3 1.7 5.8E-05 46.2 4.7 71 1011-1081 11-94 (253)
409 3ai3_A NADPH-sorbose reductase 78.3 2.1 7E-05 46.0 5.4 72 1011-1082 9-94 (263)
410 2wsb_A Galactitol dehydrogenas 78.3 1.8 6.1E-05 45.8 4.9 71 1011-1081 13-93 (254)
411 2j48_A Two-component sensor ki 78.2 4.4 0.00015 36.2 6.9 94 1034-1129 3-103 (119)
412 3hn7_A UDP-N-acetylmuramate-L- 78.2 3.9 0.00013 49.2 8.3 75 1010-1090 20-97 (524)
413 3cg0_A Response regulator rece 78.1 7.8 0.00027 36.2 8.9 95 1033-1128 10-112 (140)
414 2pnf_A 3-oxoacyl-[acyl-carrier 78.1 2 6.9E-05 45.2 5.2 72 1011-1082 9-94 (248)
415 1ygy_A PGDH, D-3-phosphoglycer 78.1 2.8 9.4E-05 50.6 7.0 84 1010-1103 143-228 (529)
416 2l0e_A Sodium/hydrogen exchang 78.1 0.34 1.2E-05 36.9 -0.6 29 710-738 2-30 (33)
417 1xg5_A ARPG836; short chain de 78.1 2.2 7.4E-05 46.2 5.5 75 1008-1082 30-120 (279)
418 3nyw_A Putative oxidoreductase 78.1 2.5 8.4E-05 45.4 5.9 72 1011-1082 9-96 (250)
419 2jah_A Clavulanic acid dehydro 78.0 2.1 7.1E-05 45.7 5.3 71 1011-1081 9-92 (247)
420 1w6u_A 2,4-dienoyl-COA reducta 78.0 2.5 8.4E-05 46.1 6.0 76 1007-1082 23-113 (302)
421 4fn4_A Short chain dehydrogena 78.0 3.8 0.00013 44.8 7.4 61 1007-1067 4-72 (254)
422 2ehd_A Oxidoreductase, oxidore 77.8 2.3 8E-05 44.5 5.6 73 1010-1082 6-87 (234)
423 1piw_A Hypothetical zinc-type 77.8 1.6 5.4E-05 49.5 4.5 72 1010-1083 181-253 (360)
424 1yio_A Response regulatory pro 77.7 8.3 0.00028 39.1 9.6 97 1032-1129 4-107 (208)
425 2x5o_A UDP-N-acetylmuramoylala 77.7 2.5 8.5E-05 49.5 6.3 71 1010-1087 6-78 (439)
426 2o23_A HADH2 protein; HSD17B10 77.6 1.7 5.8E-05 46.3 4.5 71 1011-1081 14-94 (265)
427 1srr_A SPO0F, sporulation resp 77.6 11 0.00037 34.5 9.6 96 1033-1129 4-106 (124)
428 1vl8_A Gluconate 5-dehydrogena 77.6 2.5 8.5E-05 45.8 5.8 75 1007-1081 18-107 (267)
429 3ucx_A Short chain dehydrogena 77.5 2.1 7.3E-05 46.1 5.3 71 1011-1081 13-96 (264)
430 1mx3_A CTBP1, C-terminal bindi 77.5 1 3.5E-05 51.5 2.8 86 1011-1105 170-257 (347)
431 1rpn_A GDP-mannose 4,6-dehydra 77.5 1.6 5.4E-05 48.1 4.3 73 1010-1082 15-95 (335)
432 3m1a_A Putative dehydrogenase; 77.5 2 6.7E-05 46.5 5.0 73 1010-1082 6-88 (281)
433 1r6d_A TDP-glucose-4,6-dehydra 77.5 2.6 8.7E-05 46.6 6.0 71 1011-1082 2-85 (337)
434 1yde_A Retinal dehydrogenase/r 77.5 2 7E-05 46.5 5.1 71 1011-1081 11-90 (270)
435 2qq5_A DHRS1, dehydrogenase/re 77.4 1.8 6.3E-05 46.3 4.7 71 1011-1081 7-91 (260)
436 3rkr_A Short chain oxidoreduct 77.3 1.9 6.5E-05 46.4 4.8 73 1010-1082 30-115 (262)
437 3rwb_A TPLDH, pyridoxal 4-dehy 77.2 2 7E-05 45.8 5.0 72 1011-1082 8-89 (247)
438 3b2n_A Uncharacterized protein 77.2 11 0.00038 35.2 9.7 96 1034-1129 5-108 (133)
439 2ae2_A Protein (tropinone redu 77.2 1.9 6.4E-05 46.3 4.7 72 1011-1082 11-96 (260)
440 2a4k_A 3-oxoacyl-[acyl carrier 77.0 2.5 8.7E-05 45.7 5.7 71 1011-1081 8-88 (263)
441 1pl8_A Human sorbitol dehydrog 76.6 3.7 0.00013 46.4 7.1 91 1010-1105 173-271 (356)
442 1yj8_A Glycerol-3-phosphate de 76.5 3.6 0.00012 46.9 7.0 40 1011-1050 23-74 (375)
443 3uko_A Alcohol dehydrogenase c 76.5 3.8 0.00013 46.6 7.3 93 1010-1105 195-293 (378)
444 1nyt_A Shikimate 5-dehydrogena 76.5 1.2 4.1E-05 48.8 2.9 110 1010-1127 120-237 (271)
445 3ec7_A Putative dehydrogenase; 76.5 7.8 0.00027 43.9 9.8 125 1009-1141 23-162 (357)
446 3r0j_A Possible two component 76.5 10 0.00035 40.0 10.2 96 1033-1129 24-126 (250)
447 2d8a_A PH0655, probable L-thre 76.4 4.5 0.00015 45.5 7.7 74 1010-1084 169-247 (348)
448 4dyv_A Short-chain dehydrogena 76.4 2.6 8.8E-05 45.9 5.6 72 1010-1081 29-110 (272)
449 1iz0_A Quinone oxidoreductase; 76.4 3.6 0.00012 45.2 6.8 70 1010-1083 127-198 (302)
450 1p3d_A UDP-N-acetylmuramate--a 76.3 3.6 0.00012 48.7 7.2 72 1010-1088 19-92 (475)
451 3oig_A Enoyl-[acyl-carrier-pro 76.3 2.1 7.1E-05 45.9 4.8 72 1010-1081 8-95 (266)
452 3jyo_A Quinate/shikimate dehyd 76.3 3.4 0.00012 45.8 6.5 109 1010-1122 128-247 (283)
453 3tpc_A Short chain alcohol deh 76.3 2.1 7.1E-05 45.8 4.7 71 1011-1081 9-89 (257)
454 1j4a_A D-LDH, D-lactate dehydr 76.3 2.5 8.6E-05 47.9 5.6 84 1010-1104 147-232 (333)
455 1ydw_A AX110P-like protein; st 76.2 7.1 0.00024 44.1 9.3 108 1010-1125 7-127 (362)
456 3dfu_A Uncharacterized protein 76.2 2.8 9.5E-05 45.4 5.6 31 1011-1041 8-38 (232)
457 3fbt_A Chorismate mutase and s 76.1 2.2 7.6E-05 47.4 5.0 102 1010-1122 123-232 (282)
458 1nvm_B Acetaldehyde dehydrogen 76.1 3.2 0.00011 46.7 6.3 92 1010-1105 5-102 (312)
459 3h7a_A Short chain dehydrogena 76.1 1.7 6E-05 46.6 4.0 71 1011-1081 9-91 (252)
460 3c3g_A Alpha/beta peptide with 76.0 2.9 0.0001 31.5 3.9 27 286-312 4-30 (33)
461 3tjr_A Short chain dehydrogena 75.9 2.7 9.2E-05 46.4 5.6 72 1011-1082 33-117 (301)
462 2cf5_A Atccad5, CAD, cinnamyl 75.9 3.5 0.00012 46.7 6.6 73 1010-1084 182-255 (357)
463 3gaf_A 7-alpha-hydroxysteroid 75.9 2.4 8.3E-05 45.5 5.1 71 1011-1081 14-97 (256)
464 3lyl_A 3-oxoacyl-(acyl-carrier 75.9 2.5 8.5E-05 44.7 5.1 72 1011-1082 7-91 (247)
465 3fpc_A NADP-dependent alcohol 75.8 3.3 0.00011 46.6 6.5 75 1010-1084 168-246 (352)
466 3cxt_A Dehydrogenase with diff 75.8 2.8 9.5E-05 46.2 5.7 71 1011-1081 36-119 (291)
467 3guy_A Short-chain dehydrogena 75.8 4.3 0.00015 42.5 6.9 71 1011-1081 3-80 (230)
468 2rhc_B Actinorhodin polyketide 75.8 3.6 0.00012 44.7 6.5 71 1011-1081 24-107 (277)
469 2i76_A Hypothetical protein; N 75.7 1.2 4.1E-05 48.7 2.7 65 1011-1085 4-70 (276)
470 1ja9_A 4HNR, 1,3,6,8-tetrahydr 75.7 3.3 0.00011 44.2 6.1 72 1010-1081 22-107 (274)
471 3ajr_A NDP-sugar epimerase; L- 75.7 1.6 5.3E-05 47.8 3.6 66 1012-1082 2-71 (317)
472 3rih_A Short chain dehydrogena 75.6 2.8 9.5E-05 46.3 5.6 75 1007-1081 38-127 (293)
473 1kew_A RMLB;, DTDP-D-glucose 4 75.6 1.8 6.3E-05 48.1 4.2 71 1012-1082 3-82 (361)
474 1y81_A Conserved hypothetical 75.6 1.4 4.8E-05 43.7 2.8 103 1010-1128 15-123 (138)
475 3grc_A Sensor protein, kinase; 75.5 8.2 0.00028 36.2 8.2 96 1033-1129 7-112 (140)
476 1t2a_A GDP-mannose 4,6 dehydra 75.5 1.7 5.6E-05 49.0 3.8 73 1010-1082 25-111 (375)
477 2p4h_X Vestitone reductase; NA 75.5 1.6 5.3E-05 47.8 3.5 70 1011-1081 3-82 (322)
478 3tzq_B Short-chain type dehydr 75.4 2.4 8.2E-05 46.0 4.9 71 1011-1081 13-93 (271)
479 4dqx_A Probable oxidoreductase 75.3 2.7 9.1E-05 45.9 5.3 76 1007-1082 24-110 (277)
480 1p77_A Shikimate 5-dehydrogena 75.3 5.6 0.00019 43.5 7.9 111 1010-1126 120-237 (272)
481 3a10_A Response regulator; pho 75.3 6.4 0.00022 35.6 7.2 94 1034-1128 3-101 (116)
482 2zat_A Dehydrogenase/reductase 75.3 2.7 9.3E-05 44.9 5.3 72 1010-1081 15-99 (260)
483 1zem_A Xylitol dehydrogenase; 75.2 2.7 9.2E-05 45.2 5.3 71 1011-1081 9-92 (262)
484 1gy8_A UDP-galactose 4-epimera 75.2 3 0.0001 47.1 6.0 72 1011-1082 4-102 (397)
485 3t4e_A Quinate/shikimate dehyd 75.1 3.9 0.00013 46.1 6.7 74 1010-1084 149-231 (312)
486 1xq1_A Putative tropinone redu 75.1 2.6 9.1E-05 45.0 5.1 72 1011-1082 16-101 (266)
487 2vt3_A REX, redox-sensing tran 75.0 1.8 6.3E-05 46.2 3.8 81 1010-1098 86-169 (215)
488 3evn_A Oxidoreductase, GFO/IDH 75.0 3.2 0.00011 46.4 6.0 124 1010-1141 6-141 (329)
489 1nff_A Putative oxidoreductase 75.0 2.7 9.1E-05 45.3 5.2 71 1011-1081 9-89 (260)
490 4ibo_A Gluconate dehydrogenase 75.0 2 6.7E-05 46.8 4.1 76 1007-1082 23-112 (271)
491 3grp_A 3-oxoacyl-(acyl carrier 74.9 2.8 9.7E-05 45.4 5.4 76 1007-1082 24-110 (266)
492 1y8q_A Ubiquitin-like 1 activa 74.9 6.8 0.00023 44.6 8.7 109 1009-1141 36-147 (346)
493 2oxj_A Hybrid alpha/beta pepti 74.9 3.2 0.00011 31.5 3.9 27 286-312 5-31 (34)
494 2f00_A UDP-N-acetylmuramate--L 74.8 3.8 0.00013 48.7 6.8 71 1010-1087 20-92 (491)
495 2ydy_A Methionine adenosyltran 74.8 1.2 4.1E-05 48.7 2.4 64 1011-1082 4-69 (315)
496 3k92_A NAD-GDH, NAD-specific g 74.8 11 0.00038 44.3 10.5 145 1010-1167 222-394 (424)
497 3c7a_A Octopine dehydrogenase; 74.7 4 0.00014 47.0 6.8 42 1011-1052 4-50 (404)
498 3kcn_A Adenylate cyclase homol 74.7 15 0.00051 35.1 10.0 97 1032-1129 4-108 (151)
499 2gdz_A NAD+-dependent 15-hydro 74.7 2.7 9.1E-05 45.2 5.0 72 1011-1082 9-95 (267)
500 3n74_A 3-ketoacyl-(acyl-carrie 74.6 2.8 9.7E-05 44.7 5.2 68 1002-1069 1-73 (261)
No 1
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.91 E-value=3.6e-24 Score=251.07 Aligned_cols=163 Identities=28% Similarity=0.453 Sum_probs=159.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
+.||||||+|++|+.+++.|.+.|++|++||.|+++++.++..|+++++||++++++|+++|+++|++||+++++++.|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcHHHHHHH
Q 000968 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEIAATINEFRTRHLSELTEL 1168 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~lg~~~~ei~~~i~~~r~~~~~~L~~~ 1168 (1207)
.++..+|+++|+++||||++++++...|+++|||+||+|++++|+.|++++|..+|++++++.+.++.+|+++++.++..
T Consensus 84 ~i~~~ar~~~p~~~Iiara~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~~lg~~~~~~~~~~~~~r~~~~~~~~~~ 163 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEM 163 (413)
T ss_dssp HHHHHHHHHCTTCEEEEEESSHHHHHHHHHTTCSSCEETTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhh
Q 000968 1169 CQA 1171 (1207)
Q Consensus 1169 ~~~ 1171 (1207)
...
T Consensus 164 ~~~ 166 (413)
T 3l9w_A 164 AMV 166 (413)
T ss_dssp HHC
T ss_pred hhc
Confidence 554
No 2
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=99.87 E-value=9.8e-22 Score=196.51 Aligned_cols=137 Identities=23% Similarity=0.297 Sum_probs=131.7
Q ss_pred cccccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1005 TDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1005 ~~~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
..++++|++|||+|++|+.+++.|.+.|++|+++|.|+++++.++..|+++++||++++++|+++++++|+.+|++++++
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHH
Q 000968 1085 GANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~ 1141 (1207)
..|..++..+|+++|+++||+|++++++.+.|+++|+|+||.|+.+++..+++.+.+
T Consensus 83 ~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~a~~i~~~l~~ 139 (140)
T 3fwz_A 83 YEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLET 139 (140)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHHHTTCSEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCCEEECchHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999988753
No 3
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.82 E-value=4.3e-20 Score=213.31 Aligned_cols=296 Identities=18% Similarity=0.167 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHH----Hhchh--hHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHhhccccCcH
Q 000968 653 TKAIAEFGVVFLLFNIGLELSVERL----SSMKK--YVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALSST 726 (1207)
Q Consensus 653 l~~LaeLGLv~LLF~aGLEldl~~L----r~~~k--~il~Lg~l~vllt~vlvglll~~llGls~~~ALlLGailS~TSt 726 (1207)
...+.+-.+++++|.+|+|+|.+.+ ++.++ .....++.++++|+++ ++.++...+.+...+.+.+.||.
T Consensus 60 ~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~i-----y~~~~~~~~~~~~gw~ip~ATdI 134 (388)
T 1zcd_A 60 LLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALL-----YLAFNYADPITREGWAIPAATDI 134 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHH-----HGGGCCSSTTHHHHTSSSSCCCH
T ss_pred HHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHH-----HHHHhcCChhhhhhhHHHHHHHH
Confidence 4678888999999999999999977 65555 3566677777777643 45667777778888899999999
Q ss_pred HHHHHHHHhcCCCCCh-hhHHHHHHHhhhhHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000968 727 AVVLQVLQERGESTSR-HGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGVAAVKAAVAITAIIAGGR 805 (1207)
Q Consensus 727 AVVl~IL~elg~l~s~-~Grl~Lsvsl~nDi~aIvll~li~~la~~~s~g~~~~~~i~~~L~~~ll~~il~iil~lllg~ 805 (1207)
++.+.++...+...+. .+..+++.+++||+.+|++++++.. ++..+. .+.. .++ .+++..
T Consensus 135 Afal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt-------~~~~~~----~l~~----~~~----~~~~~~ 195 (388)
T 1zcd_A 135 AFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT-------NDLSMA----SLGV----AAV----AIAVLA 195 (388)
T ss_dssp HHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC-------CCCCHH----HHHH----HHH----HHHHHH
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCccHH----HHHH----HHH----HHHHHH
Confidence 9999999987665544 4588899999999999999887621 122221 1110 111 111111
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhhccc-----chhHHHHHHHHhHH-hHHHH
Q 000968 806 LLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAET-----EFSLQVESDIAPYR-GLLLG 879 (1207)
Q Consensus 806 ~llrpll~~ia~~~s~elf~l~~Lal~Lg~a~Lae~lGLS~~LGAFvAGLvLsn~-----~~~~~l~e~l~~~~-~~flp 879 (1207)
++.| ...+..... +.+.+..++.++..|+|+++|+|++|+++|.. +..+++++.++|+. .+++|
T Consensus 196 ~l~r--------~~v~~~~~y--~~lgl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilP 265 (388)
T 1zcd_A 196 VLNL--------CGARRTGVY--ILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILP 265 (388)
T ss_dssp HHHH--------TTCCCTHHH--HHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHH
T ss_pred HHHH--------hcchhHHHH--HHHHHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1211 111111111 12233445667999999999999999999974 35788999999985 58899
Q ss_pred HH-HHHHcCccChhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHhh----------CcchhhhhhhhhhcCCCcchhhHH
Q 000968 880 LF-FMTVGMSIDPKLLLS-NFPVITGALGLLIGGKTILVALVGRLF----------GVSVISAIRTGLLLAPGGEFAFVA 947 (1207)
Q Consensus 880 lF-Fv~IGm~Idl~~L~~-~~~~illlllllll~K~l~v~l~~~l~----------g~~~real~lGL~La~rGe~alVL 947 (1207)
+| |+..|+++|...+.. .-+..+++++..+++|+++++..+++. |++|++...+|+.++.++++++++
T Consensus 266 lFaFanaGv~l~~~~~~~l~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~I 345 (388)
T 1zcd_A 266 LFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFI 345 (388)
T ss_dssp HHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHH
T ss_pred HHHHHhcCeeecccchhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHH
Confidence 99 999999999743211 012223445566899999866666555 899999999999999999999999
Q ss_pred HHHHHhhcc--chhhhHHHHHHHHHHHHHhHHHHHhh
Q 000968 948 FGEAVNQGI--MSSQLSSLLFLLVGISMALTPWLAAG 982 (1207)
Q Consensus 948 a~lal~~gl--Is~el~siLvlvvvlS~lItPlL~~~ 982 (1207)
+..+++.+. +.++.+..+++++++|.+++|++.++
T Consensus 346 a~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~ 382 (388)
T 1zcd_A 346 ASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRV 382 (388)
T ss_dssp HHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTT
T ss_pred HHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998765 24555777778888888889887653
No 4
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.82 E-value=1.5e-19 Score=219.22 Aligned_cols=137 Identities=20% Similarity=0.190 Sum_probs=129.8
Q ss_pred cccccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1005 TDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1005 ~~~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
....++|+||||||++|+.+++.|.+.|++|++||.|+++++.+++. |+++++||++++++|+++|+++|+.+|+ +.+
T Consensus 123 ~~~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~~ 201 (565)
T 4gx0_A 123 PDDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NLS 201 (565)
T ss_dssp CTTCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CSC
T ss_pred ccccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eCC
Confidence 35778999999999999999999999999999999999999999988 9999999999999999999999999988 788
Q ss_pred cchhHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHc
Q 000968 1084 PGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQA 1143 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~l 1143 (1207)
|+.|..+++++|+++ +++|++|++++++.+.|+++|+|+||+|+..++..+++.+..+.
T Consensus 202 D~~n~~~~~~ar~~~-~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~ 260 (565)
T 4gx0_A 202 DPDNANLCLTVRSLC-QTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCG 260 (565)
T ss_dssp HHHHHHHHHHHHTTC-CCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHhc-CceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccc
Confidence 889999999999999 99999999999999999999999999999999999999988763
No 5
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=99.78 E-value=5.5e-20 Score=209.03 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=126.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
++|++|||+|++|+.+++.|.+.|+ ++++|.|+++++ +++.|+++++||++++++|+++|+++|+.+++++++|+.|+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 6799999999999999999999999 999999999999 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
.+++.+|+++|+.++++|++++++.+.++++|+|+||+|+.+++..+++.++.+
T Consensus 193 ~~~~~ar~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~~~~~~~~~l~~~~~~~ 246 (336)
T 1lnq_A 193 HCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDG 246 (336)
T ss_dssp HHHHHHHTTCTTSEEEEECSSGGGHHHHHHTTCSEEECHHHHHHHHHHHTSSCS
T ss_pred HHHHHHHHHCCCCeEEEEECCHHHHHHHHHcCCCEEEChhHhHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999998888888877643
No 6
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=99.77 E-value=1.7e-18 Score=174.96 Aligned_cols=142 Identities=20% Similarity=0.202 Sum_probs=127.4
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCCh-HHHHhh---hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRS-DRVAIG---RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~-e~ve~~---r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++|++|||+|++|+.+++.|.+.|++|+++|.|+ ++.+.+ ...|+.+++||++++++|+++++++|+.+|++++++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5799999999999999999999999999999984 655444 356899999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHcCCCHHHHH
Q 000968 1085 GANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEIA 1151 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~lg~~~~ei~ 1151 (1207)
+.|..++..+|+++|..+|++|++++++.+.|+++|+|+|++|+..++..+++.+..+ ++..+.+.
T Consensus 83 ~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~~~~~-~~~~~~~~ 148 (153)
T 1id1_A 83 ADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGE-EINNDMLV 148 (153)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHHHHHHHHHHHHHTTC-CCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEcHHHHHHHHHHHHHhCC-CCcHHHHH
Confidence 9999999999999999999999999999999999999999999999998888877643 55554444
No 7
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=99.76 E-value=4.4e-18 Score=169.08 Aligned_cols=132 Identities=17% Similarity=0.148 Sum_probs=127.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
.|++|+|+|++|+.+++.|.+.|++|+++|.|+++++.++..+.++++||+++++.|+++++.+++.+|+++++++.|..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~ 86 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLK 86 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHH
Confidence 58999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
++..+|+.+ ..++++|++++++.+.|+++|+|+|++|+.+++..+++.+..+
T Consensus 87 ~~~~a~~~~-~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~i~~p 138 (141)
T 3llv_A 87 ILKALRSVS-DVYAIVRVSSPKKKEEFEEAGANLVVLVADAVKQAFMDKIKKM 138 (141)
T ss_dssp HHHHHHHHC-CCCEEEEESCGGGHHHHHHTTCSEEEEHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhC-CceEEEEEcChhHHHHHHHcCCCEEECHHHHHHHHHHHHHhCc
Confidence 999999999 8899999999999999999999999999999999999998875
No 8
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=1.2e-17 Score=173.23 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=133.3
Q ss_pred cccccccccCCCchHHHHHHHHHhc-CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhc-CccccCEEEEecCCc
Q 000968 1007 DLQDHIILCGFGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV-GAERACAAAITLDTP 1084 (1207)
Q Consensus 1007 ~lk~hVIIiG~GrvG~~Ia~~L~~~-gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~A-gI~~A~~VViatddd 1084 (1207)
...+|++|||+|++|+.+++.|.+. |++|+++|.|+++++.++..|..+++||++++++|+++ ++++++.+|++++++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 3467999999999999999999999 99999999999999999989999999999999999999 999999999999999
Q ss_pred chhHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHcCCC
Q 000968 1085 GANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLP 1146 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~lg~~ 1146 (1207)
..|..++..+|..+|+.+|+++++++++.+.++++|+|+|+.|..+++..+++.++.+++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~~~ 178 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQLEPQ 178 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999988754
No 9
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=99.73 E-value=2.9e-18 Score=184.88 Aligned_cols=134 Identities=17% Similarity=0.220 Sum_probs=125.2
Q ss_pred cccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1007 ~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
..++|++|||+|++|+.+++.|.+.|+ |+++|.|+++++.++ .|+.+++||++++++|+++++++|+.+|+++++|+.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 467899999999999999999999999 999999999998888 889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
|+.++..+|+++|+++|++|++++++...++++|+|+||+|+.+++..+++.++.+
T Consensus 85 n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~ 140 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDG 140 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHTSSCS
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHhHHHHHHHCCCCEEECHHHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999998888888877643
No 10
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=99.70 E-value=3e-17 Score=175.24 Aligned_cols=132 Identities=16% Similarity=0.140 Sum_probs=125.3
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
+++|||+|++|+.+++.|.+.|++|+++|.|+++++.+. ..|.++++||++++++|+++++++|+.+|++++++..|..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~ 81 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLF 81 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHHH
Confidence 589999999999999999999999999999999998865 4689999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
++..+|+.+|..++++|++++++.+.|+++|+|+||+|+..++..+++.+..+
T Consensus 82 ~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~d~vi~p~~~~~~~l~~~~~~~ 134 (218)
T 3l4b_C 82 IAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFPD 134 (218)
T ss_dssp HHHHHHHTSCCCEEEECCCSGGGHHHHHHHTCEECCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCCeEEEEEeCcchHHHHHHCCCCEEECHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999998888754
No 11
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.68 E-value=3.5e-17 Score=198.50 Aligned_cols=128 Identities=24% Similarity=0.350 Sum_probs=123.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
+|++|||+|++|+.+++.|.+.|++|++||.|+++++.+. ++++||++|+++|+++|+++||.+|+++++|+.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~ 424 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIF 424 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHH
Confidence 8999999999999999999999999999999999987653 899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~ 1141 (1207)
+++.+|+++|+++||+|++++++.+.++++|+|+||+|+..++..+++.+..
T Consensus 425 ~~~~ak~l~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~~~~i~~~~~~ 476 (565)
T 4gx0_A 425 LTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEH 476 (565)
T ss_dssp HHHHHHHHCSSSEEEEEESSTTSHHHHHHHTCSEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEccchHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999998874
No 12
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.67 E-value=4.4e-17 Score=193.68 Aligned_cols=131 Identities=21% Similarity=0.195 Sum_probs=121.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
|+||||+|++|+.+++.|...|++|++||.|+++++.+. ..++.+++||++++++|++||+++|+++|++|++|+.|+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De~Nl~ 84 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDETNMA 84 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChHHHHH
Confidence 799999999999999999999999999999999999886 4699999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeCChHHHHHHH------hCCCCeeecCCcHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLE------KAGATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~~~~~L~------~aGAd~VI~p~~eaal~La~~iL~ 1141 (1207)
+|+.||++||..++++|++++++..... ..|+|++|+|+.+++..+.+.+..
T Consensus 85 ~~~~Ak~~~~~~~~iar~~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~ 142 (461)
T 4g65_A 85 ACQVAFTLFNTPNRIARIRSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQY 142 (461)
T ss_dssp HHHHHHHHHCCSSEEEECCCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCccceeEeccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccC
Confidence 9999999999999999999998764432 379999999999888888877764
No 13
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=99.56 E-value=2.8e-14 Score=140.21 Aligned_cols=133 Identities=18% Similarity=0.235 Sum_probs=125.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc-chhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP-GANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd-~~Ni 1088 (1207)
.|++|+|+|.+|+.+++.|...|++++++|.++++.+.++..+..+++||.++++.|+++++.++|.+|++++++ ..|.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~ 86 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST 86 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHHH
Confidence 479999999999999999999999999999999999888877888899999999999999999999999999987 7899
Q ss_pred HHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHc
Q 000968 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQA 1143 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~l 1143 (1207)
.++..+++.+|+ ++++++++..+.+.++++|++.|+.|...++..+++.++.+.
T Consensus 87 ~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~vi~p~~~~~~~l~~~~~~~~ 140 (144)
T 2hmt_A 87 LTTLLLKELDIP-NIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDEN 140 (144)
T ss_dssp HHHHHHHHTTCS-EEEEECCSHHHHHHHHHHTCSEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-eEEEEeCCHHHHHHHHHcCCCEEECccHHHHHHHHHHHhhcc
Confidence 999999999997 999999999999999999999999999999999999998763
No 14
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.52 E-value=3.8e-14 Score=143.51 Aligned_cols=133 Identities=19% Similarity=0.183 Sum_probs=123.8
Q ss_pred cccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1007 ~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
....+++|+|+|.+|+.+++.|...|.+|+++|.|+++.+.++ ..|..++.||+++++.|.++++..++.||++++++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 3457899999999999999999999999999999999998887 678889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVL 1140 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL 1140 (1207)
.|..++..++..+|..+++++++++.+.+.++++|++ |+.|...++..+++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~-vi~p~~~~a~~l~~~l~ 150 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYDPEKIKIFEENGIK-TICPAVLMIEKVKEFII 150 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE-EECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc-EEcHHHHHHHHHHHHHh
Confidence 9999999999989999999999999999999999999 99999999988887765
No 15
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.51 E-value=5.2e-14 Score=137.84 Aligned_cols=131 Identities=27% Similarity=0.293 Sum_probs=120.3
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
+++|+|+|.+|+.+++.|.+.|++++++|.++++.+.++. .+..++.||.++++.|.++++.++|.++++++++..|..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~ 85 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLM 85 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHHH
Confidence 7899999999999999999999999999999999887764 488899999999999999999999999999999999998
Q ss_pred HHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
++..++..++. +++++++++.+.+.++++|++.|+.|+...+..+++.+..+
T Consensus 86 ~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~v~~p~~~~~~~~~~~~~~p 137 (140)
T 1lss_A 86 SSLLAKSYGIN-KTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIERP 137 (140)
T ss_dssp HHHHHHHTTCC-CEEEECSSTTHHHHHHHTTCSEEECHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHcCCC-EEEEEecCHhHHHHHHHcCCCEEECHHHHHHHHHHHHhccC
Confidence 88899998875 89999999999999999999999999999999888877643
No 16
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.49 E-value=5.2e-14 Score=167.34 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=122.9
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh--CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~--~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
..+++|+|+|++|+.+++.|.+ ++.+.+||.|+++++.+.+ .+..+++||++|+++|+++|+++||++|++|+||+.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~ 313 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNEDET 313 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccCcHH
Confidence 4679999999999999999975 5899999999999988854 368899999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
|+.+++.||++++. ++|++++++++...+++.|+|.+|+|...++..+.+++...
T Consensus 314 Ni~~~llAk~~gv~-kvIa~vn~~~~~~l~~~~gid~visp~~~~a~~I~~~i~~~ 368 (461)
T 4g65_A 314 NIMSAMLAKRMGAK-KVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRRA 368 (461)
T ss_dssp HHHHHHHHHHTTCS-EEEEECSCHHHHHHHCSSSSCEEECHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCc-cccccccccchhhhhhccccceeeCHHHHHHHHHHHHhhcc
Confidence 99999999999976 99999999999999999999999999999998888888764
No 17
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=99.31 E-value=2.2e-12 Score=160.11 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=113.6
Q ss_pred ccccccccccCCCchHHH--HHHHHHh-----cCCCeEeecCChH--HHHhhh---hCCCCEEEecCCCHHHHHhcCccc
Q 000968 1006 DDLQDHIILCGFGRVGQI--IAQLLSE-----RLIPFVALDVRSD--RVAIGR---ALDLPVYFGDAGSREVLHKVGAER 1073 (1207)
Q Consensus 1006 ~~lk~hVIIiG~GrvG~~--Ia~~L~~-----~gi~vvVID~D~e--~ve~~r---~~g~~vi~GDatd~evL~~AgI~~ 1073 (1207)
...++|+||||+++.++. +.++|.. .+.++|+++.++. .++... ..++.++.||++++++|++||+++
T Consensus 50 ~~~k~HIIIcG~~~~~~v~~fL~El~~~~~~~~~~~IVIL~~~~p~~eLe~lL~~~~~~V~fI~Gdat~~e~L~RAgI~~ 129 (798)
T 3naf_A 50 VSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIES 129 (798)
T ss_dssp CCSSEEEEEESCCCHHHHHHHHHHHTCTTSCCCCEEEEEEESSCCCHHHHHHHHHTTTTEEEEECCSSSHHHHHHTTGGG
T ss_pred ccCCCeEEEEcCCCHHHHHHHHHHHHhhcccccCCcEEEEeCCCCcHHHHHHhhcccCceEEEEcCCCCHHHHHhcCHhh
Confidence 467899999999986553 4455443 2458999987532 223232 367899999999999999999999
Q ss_pred cCEEEEecC--------CcchhHHHHHHHHHhCCCceEEEeeCChHHHHHHHh------CCCCeeecCCcHHHHHHHHHH
Q 000968 1074 ACAAAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAV 1139 (1207)
Q Consensus 1074 A~~VViatd--------dd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~------aGAd~VI~p~~eaal~La~~i 1139 (1207)
|++++++.+ +|..|+.+++++|+++|+++|+|++.++++..+|++ +|||.||.+....+..|++.+
T Consensus 130 A~aVIIla~~~~~d~~~~Da~nIl~vLsar~lnP~i~IIa~~~~~en~~~L~~~~sw~~AGAd~VI~~~el~g~LLAqs~ 209 (798)
T 3naf_A 130 ADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSC 209 (798)
T ss_dssp CSEEEECCCTTCSCHHHHHHHHHHHHHHHHHHSTTCCEEEEESCTTGGGSGGGCTTCCTTTTCEEEEHHHHHHHHHHHHH
T ss_pred CCEEEEECCccccCCccchHHHHHHHHHHHHHCCCCCEEEEECCHhHHHHHHhcccchhcCCCEEEehHHHHHHHHHHHh
Confidence 999999885 578999999999999999999999999999999987 799999999988999999888
Q ss_pred HHH
Q 000968 1140 LAQ 1142 (1207)
Q Consensus 1140 L~~ 1142 (1207)
+.+
T Consensus 210 l~P 212 (798)
T 3naf_A 210 LAQ 212 (798)
T ss_dssp HST
T ss_pred cCC
Confidence 754
No 18
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=99.25 E-value=7.2e-12 Score=154.10 Aligned_cols=134 Identities=18% Similarity=0.208 Sum_probs=112.1
Q ss_pred cccccccCCCchHHH--HHHHHHhc-----CCCeEeecCCh--HHHHhh-h--hCCCCEEEecCCCHHHHHhcCccccCE
Q 000968 1009 QDHIILCGFGRVGQI--IAQLLSER-----LIPFVALDVRS--DRVAIG-R--ALDLPVYFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~--Ia~~L~~~-----gi~vvVID~D~--e~ve~~-r--~~g~~vi~GDatd~evL~~AgI~~A~~ 1076 (1207)
++|+||||+++.+.. +.+++-.. +.++|+++.++ ..++.+ + ..++.++.||++++++|++|++++|++
T Consensus 3 k~HIIVcG~~~~~sV~~FL~Ef~h~d~~~~~~~VVIL~~~~P~~ELe~lL~~~~~~V~fI~Gdat~~edL~RA~I~~A~a 82 (726)
T 3mt5_A 3 RKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADA 82 (726)
T ss_dssp -CEEEEEESCCHHHHHHHHHHHHHHCTTTTTCEEEEECSSCCCHHHHTTHHHHCSSEEEECCCTTSHHHHHHTTGGGCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhccccccCCcEEEEeCCCCCHHHHHHHHhhcCceEEEEeCCCCHHHHHhcChhhcCE
Confidence 689999999988875 34544333 34899998764 233333 2 368999999999999999999999999
Q ss_pred EEEecC--------CcchhHHHHHHHHHhCCCceEEEeeCChHHHHHHHh------CCCCeeecCCcHHHHHHHHHHHHH
Q 000968 1077 AAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1077 VViatd--------dd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~------aGAd~VI~p~~eaal~La~~iL~~ 1142 (1207)
++++.+ +|..|+.+++++|+++|+++|+|++.++++..+|++ +|||.||.+....+..|++.++.+
T Consensus 83 VIIlad~~~~d~~~sDa~nIl~vLsar~lnP~i~IVA~~~~~en~~~L~ri~sw~~AGAd~VI~~~el~g~LLAqs~l~P 162 (726)
T 3mt5_A 83 CLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQ 162 (726)
T ss_dssp EEEECCTTCSCHHHHHHHHHHHHHHHHHHCTTSCEEEEESCHHHHGGGGGSTTCCTTTTCEEEEHHHHHHHHHHHHHHST
T ss_pred EEEEcCccccCCcccHHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHhhccchhhcCCCEEEehHHHHHHHHHHHhcCC
Confidence 999775 478999999999999999999999999999999984 899999999989999999988854
No 19
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=98.84 E-value=2.4e-09 Score=133.99 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=105.0
Q ss_pred cccccccCCCchHHHHHHHHHh--------cCCCeEeecCChHHHHh---hh--hCCCCEEEecCCCHHHHHhcCccccC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSE--------RLIPFVALDVRSDRVAI---GR--ALDLPVYFGDAGSREVLHKVGAERAC 1075 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~--------~gi~vvVID~D~e~ve~---~r--~~g~~vi~GDatd~evL~~AgI~~A~ 1075 (1207)
++||||||+++.++ +...|++ .+.++|++..++...+. ++ ...+.++.||+++++.|++|++++|+
T Consensus 3 k~HivvcG~~~~~~-l~~fL~ef~~~~~~~~~~~vVil~~~~p~~el~~~l~~~~~~v~~i~Gs~~~~~dL~ra~i~~A~ 81 (722)
T 4hpf_A 3 KKFIVVCGNITVDS-VTAFLRNFLRDKSGEINTEIVFLGETPPSLELETIFKCYLAYTTFISGSAMKWEDLRRVAVESAE 81 (722)
T ss_dssp CCEEEEESCCCHHH-HHHHHTTC--------CCEEECCBSCC------CCCCTTTTSEECCBCCSSCHHHHHHHTGGGSS
T ss_pred CCEEEEECCCCHHH-HHHHHHHHhhhhhhcCCCeEEEEeCCCCCHHHHHHHhhhCceEEEEEcCCCCHHHHHhcCcccCC
Confidence 57999999998875 4444443 25678888665433221 11 22456678999999999999999999
Q ss_pred EEEEecC--------CcchhHHHHHHHHHhCCCceEEEeeCChHHHHHHHh------CCCCeeecCCcHHHHHHHHHHHH
Q 000968 1076 AAAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1076 ~VViatd--------dd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~------aGAd~VI~p~~eaal~La~~iL~ 1141 (1207)
+++++.+ +|..|+..++++|+++|+++|+|+..++++...+.. +|||+||.+....+..||+.++.
T Consensus 82 av~Il~~~~~~d~~~~D~~~il~~laik~~~p~~~iivq~~~~~n~~~~~~~~~~~~~gad~VI~~~el~~~lla~s~~~ 161 (722)
T 4hpf_A 82 ACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTRIIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQGCLV 161 (722)
T ss_dssp EEEECCCSSCSCHHHHHHHHHHHHHHHHHHCTTCCEEEECSSGGGGGHHHHSTTCCTTTTCEEECHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCccCCchhhHHHHHHHHHHHHHhCCCCCEEEEECChhhHHHHHhhhhhhhcCCCeEEeHHHHHHHHHHHHhcC
Confidence 9999876 367899999999999999999999999988777765 69999999999899999998886
Q ss_pred H
Q 000968 1142 Q 1142 (1207)
Q Consensus 1142 ~ 1142 (1207)
+
T Consensus 162 P 162 (722)
T 4hpf_A 162 P 162 (722)
T ss_dssp T
T ss_pred C
Confidence 4
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.71 E-value=0.00018 Score=67.62 Aligned_cols=103 Identities=18% Similarity=0.074 Sum_probs=80.3
Q ss_pred ccccccCCCchHHHHHHHHHhcC-CCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~g-i~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
.+++|+|.|.+|+.+++.|.+.| .+++++|+++++.+.+...+..++.+|.++++.+.++ +..+|.||.+++.. .+.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~~~~~-~~~ 83 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA-LGGFDAVISAAPFF-LTP 83 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH-TTTCSEEEECSCGG-GHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH-HcCCCEEEECCCch-hhH
Confidence 46899999999999999999999 8999999999999888888899999999999988876 67899999988543 344
Q ss_pred HHHHHHHHhCCCceEEEeeCChHHHHHH
Q 000968 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNL 1116 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d~~~~~~L 1116 (1207)
.++..+++.+ ++.+.-..+....+.+
T Consensus 84 ~~~~~~~~~g--~~~~~~~~~~~~~~~~ 109 (118)
T 3ic5_A 84 IIAKAAKAAG--AHYFDLTEDVAATNAV 109 (118)
T ss_dssp HHHHHHHHTT--CEEECCCSCHHHHHHH
T ss_pred HHHHHHHHhC--CCEEEecCcHHHHHHH
Confidence 4555554443 3455455555544443
No 21
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=97.69 E-value=0.016 Score=66.08 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHhc---hhhHHHHHHHHHHHHHHHHHHHHHHHhCCChHHH---HHHhhccccCcHHH
Q 000968 655 AIAEFGVVFLLFNIGLELSVERLSSM---KKYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPAS---IVIGNGLALSSTAV 728 (1207)
Q Consensus 655 ~LaeLGLv~LLF~aGLEldl~~Lr~~---~k~il~Lg~l~vllt~vlvglll~~llGls~~~A---LlLGailS~TStAV 728 (1207)
.....++.++||..|+.++++++++. ++..+...+.++++..+ +++.+..+++.+...+ ++++++=+.+ ...
T Consensus 43 ~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~Pl-l~~~l~~~~~l~~~~~~Glil~~~~P~~~-~s~ 120 (332)
T 3zux_A 43 PYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPA-TAWCLSKLLNLPAEIAVGVILVGCCPGGT-ASN 120 (332)
T ss_dssp GGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHSCCCT-HHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHHH-HHHHHHHHhCCChHHHHHHHHHhcCCchh-HHH
Confidence 34556888999999999999999854 34333334445544332 3333334567765332 2222221111 122
Q ss_pred HHHHHHhcCCCCChhhHHHHHHHhhhhHHHHHHHHH
Q 000968 729 VLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLIL 764 (1207)
Q Consensus 729 Vl~IL~elg~l~s~~Grl~Lsvsl~nDi~aIvll~l 764 (1207)
++...--.+ .........++.+.+++++-+
T Consensus 121 ---v~t~~a~Gd---~~la~~~~~~stll~~~~~Pl 150 (332)
T 3zux_A 121 ---VMTYLARGN---VALSVAVTSVSTLTSPLLTPA 150 (332)
T ss_dssp ---HHHHHTTCC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHhCCC---HHHHHHHHHHHHHHHHHHHHH
Confidence 233322111 244555667777777766543
No 22
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.86 E-value=0.0012 Score=73.54 Aligned_cols=146 Identities=16% Similarity=0.086 Sum_probs=93.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChH-----HHHhhh----------------------hC-CC-CEEEecC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD-----RVAIGR----------------------AL-DL-PVYFGDA 1060 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e-----~ve~~r----------------------~~-g~-~vi~GDa 1060 (1207)
.+++|+|.|++|...++.|.+.|..|+||+.+.. ..+.+. .. ++ .++.|+-
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~ 93 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYIRSDF 93 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEECSSC
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEEcCCC
Confidence 4799999999999999999999999999998753 222221 22 33 5555543
Q ss_pred CCHHHHH---hcCccccCEEEEecCCcchhHHHHHHHHHhCCCceEEEeeCChHHHH-----HHHhCC-CCeeecCCcHH
Q 000968 1061 GSREVLH---KVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDIDHGL-----NLEKAG-ATAVVPETLEP 1131 (1207)
Q Consensus 1061 td~evL~---~AgI~~A~~VViatddd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~~-----~L~~aG-Ad~VI~p~~ea 1131 (1207)
+++.|. + ++.++.||+++++++.|..++..+|+.+---..+.++.+++... .+.+.+ ....|. +.-.
T Consensus 94 -~~~dL~~l~~--~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~f~~Pa~~~~g~~l~IaIS-T~Gk 169 (274)
T 1kyq_A 94 -KDEYLDLENE--NDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCDFYFGANLEIGDRLQILIS-TNGL 169 (274)
T ss_dssp -CGGGGCCSST--TCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBSEECCEEEEETTTEEEEEE-ESSS
T ss_pred -CHHHHhhccc--CCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCeeEeeeEEEeCCCEEEEEE-CCCC
Confidence 333332 2 45899999999999999999999999742113566777777655 444434 344443 2223
Q ss_pred HHHHHHHHH----HHc---C-CCHHHHHHHHHHHHH
Q 000968 1132 SLQLAAAVL----AQA---K-LPASEIAATINEFRT 1159 (1207)
Q Consensus 1132 al~La~~iL----~~l---g-~~~~ei~~~i~~~r~ 1159 (1207)
+-.+++.+. ..+ . -.-++....+..+|.
T Consensus 170 sp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~ 205 (274)
T 1kyq_A 170 SPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRR 205 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 334444443 444 4 444555555556554
No 23
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.39 E-value=0.0047 Score=66.71 Aligned_cols=140 Identities=9% Similarity=0.000 Sum_probs=85.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChH-HHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD-RVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e-~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.+++|+|.|.+|...++.|.+.|..++||+.+.. .++.+.. .++.++.++-.. ..++.++.||++|+|++.|
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~------~dL~~adLVIaAT~d~~~N 105 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE------EDLLNVFFIVVATNDQAVN 105 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG------GGSSSCSEEEECCCCTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH------hHhCCCCEEEECCCCHHHH
Confidence 5799999999999999999999999999998743 3444433 346666554432 3567899999999999999
Q ss_pred HHHHHHHHHhCCCceEEEeeCChHHHHHH-----HhCCCCeeecCCcHHHHHHHHHHHH----HcCCCHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDIDHGLNL-----EKAGATAVVPETLEPSLQLAAAVLA----QAKLPASEIAATINEFR 1158 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~~~~~~L-----~~aGAd~VI~p~~eaal~La~~iL~----~lg~~~~ei~~~i~~~r 1158 (1207)
..++..++ .+ + .+.++.+++..+-. .+-+...-|+. .-.|-.+++.+.. .+.-.-++...++..+|
T Consensus 106 ~~I~~~ak-~g--i-~VNvvD~p~~~~f~~Paiv~rg~l~iaIST-~G~sP~la~~iR~~ie~~lp~~~~~~~~~~~~~R 180 (223)
T 3dfz_A 106 KFVKQHIK-ND--Q-LVNMASSFSDGNIQIPAQFSRGRLSLAIST-DGASPLLTKRIKEDLSSNYDESYTQYTQFLYECR 180 (223)
T ss_dssp HHHHHHSC-TT--C-EEEC-----CCSEECCEEEEETTEEEEEEC-TTSCHHHHHHHHHHHHHHSCTHHHHHHHHHHHHH
T ss_pred HHHHHHHh-CC--C-EEEEeCCcccCeEEEeeEEEeCCEEEEEEC-CCCCcHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 99988876 32 2 24455554432111 11222222322 2234455555544 33333455555666666
Q ss_pred Hh
Q 000968 1159 TR 1160 (1207)
Q Consensus 1159 ~~ 1160 (1207)
..
T Consensus 181 ~~ 182 (223)
T 3dfz_A 181 VL 182 (223)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 24
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.94 E-value=0.013 Score=59.90 Aligned_cols=72 Identities=19% Similarity=0.139 Sum_probs=60.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.|. |.+|+.+++.|.+.|.++++++++++..+.....++.++.+|.+|++.+.++ ++.+|.||.+...
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT-VAGQDAVIVLLGT 77 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH-HTTCSEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH-HcCCCEEEECccC
Confidence 5788887 9999999999999999999999998775443355788999999999988776 5678998887654
No 25
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.65 E-value=0.029 Score=66.58 Aligned_cols=94 Identities=15% Similarity=0.012 Sum_probs=70.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCCh-HHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRS-DRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~-e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.+++|+|.|++|...++.|.+.|..++++|.+. +..+.+. ..++.++.++-.. ..++.++.||++++++..|
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~------~~l~~~~lVi~at~~~~~n 86 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE------TLLDSCWLAIAATDDDTVN 86 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG------GGGTTCSEEEECCSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCc------cccCCccEEEEcCCCHHHH
Confidence 468999999999999999999999999999863 2333333 3467777766543 3456899999999999899
Q ss_pred HHHHHHHHHhCCCceEEEeeCChHH
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDIDH 1112 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~~~ 1112 (1207)
..++..+|+.+ +. +.++.+++.
T Consensus 87 ~~i~~~a~~~~--i~-vn~~d~~e~ 108 (457)
T 1pjq_A 87 QRVSDAAESRR--IF-CNVVDAPKA 108 (457)
T ss_dssp HHHHHHHHHTT--CE-EEETTCTTS
T ss_pred HHHHHHHHHcC--CE-EEECCCccc
Confidence 99999999875 22 334455544
No 26
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.54 E-value=0.025 Score=65.36 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=88.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
..++|+|+|.+|+.+++.|.+.|.++++.|.|+++++.+.+. |...+.+ .+.|. .++|.++.+......|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~----~~ll~----~~~DIvip~a~~~~I~~ 245 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAP----NAIYG----VTCDIFAPCALGAVLND 245 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCG----GGTTT----CCCSEEEECSCSCCBST
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEECh----HHHhc----cCCcEeeccchHHHhCH
Confidence 358999999999999999999999999999999988765433 4332211 12222 47888877654444443
Q ss_pred HHHHHHHHhCCCceEEEe-eCC----hHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 000968 1089 RTVWALSKYFPNVKTFVR-AHD----IDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEIAATINEFR 1158 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaR-a~d----~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~lg~~~~ei~~~i~~~r 1158 (1207)
. .++.+ ..++|+. ++. ++..+.|++.|+ .++|....-+-.++...+..++.+.+++..-++.+.
T Consensus 246 ~---~~~~l--g~~iV~e~An~p~t~~ea~~~L~~~Gi-~~~Pd~~~NaGGv~~s~~E~~~~~~e~v~~~l~~i~ 314 (364)
T 1leh_A 246 F---TIPQL--KAKVIAGSADNQLKDPRHGKYLHELGI-VYAPDYVINAGGVINVADELYGYNRTRAMKRVDGIY 314 (364)
T ss_dssp T---HHHHC--CCSEECCSCSCCBSSHHHHHHHHHHTC-EECCHHHHTTHHHHHHHHGGGCCCHHHHHHHHTHHH
T ss_pred H---HHHhC--CCcEEEeCCCCCcccHHHHHHHHhCCC-EEecceeecCCceEEEEEeecCCCHHHHHHHHHHHH
Confidence 3 23444 3456653 333 367888999997 333333333344555556667888888877777665
No 27
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.49 E-value=0.036 Score=61.69 Aligned_cols=71 Identities=17% Similarity=-0.021 Sum_probs=57.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.++-|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|......+..+ -+..+|.|+++++++...
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e-------~~~~aDvvi~~vp~~~~~ 78 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASARE-------FAGVVDALVILVVNAAQV 78 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTT-------TTTTCSEEEECCSSHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHH-------HHhcCCEEEEECCCHHHH
Confidence 36889999999999999999999999999999999998888876653333321 246789999999986433
No 28
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.41 E-value=0.037 Score=63.35 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=68.1
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
..++.|+|.|.+|..+++.|.+.|++|++.|++++..+.+.+.|.... .+-.+.+..+ ...+|.|+++++.+ ...
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~---~~~~e~~~~a-~~~aDlVilavP~~-~~~ 82 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS---ADLEATLQRA-AAEDALIVLAVPMT-AID 82 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE---SCHHHHHHHH-HHTTCEEEECSCHH-HHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee---CCHHHHHHhc-ccCCCEEEEeCCHH-HHH
Confidence 456889999999999999999999999999999999998888887431 1223455544 56789999999864 333
Q ss_pred HHHHHHHHhCCCceEEEee
Q 000968 1089 RTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa 1107 (1207)
.+...++.+.|+. +++-+
T Consensus 83 ~vl~~l~~~~~~~-iv~Dv 100 (341)
T 3ktd_A 83 SLLDAVHTHAPNN-GFTDV 100 (341)
T ss_dssp HHHHHHHHHCTTC-CEEEC
T ss_pred HHHHHHHccCCCC-EEEEc
Confidence 4444555556663 44333
No 29
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.32 E-value=0.03 Score=60.67 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=61.2
Q ss_pred cccccCC-CchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.|. |.+|+.+++.|.+. |++|++++++++..+.+...++.++.||.+|++.|.++ ++.+|.||-+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA-FAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH-HhcCCEEEEcCCC
Confidence 4778886 99999999999998 99999999998877666667889999999999999876 4678998876653
No 30
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.31 E-value=0.064 Score=59.41 Aligned_cols=105 Identities=15% Similarity=0.075 Sum_probs=70.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
++.|+|.|.+|..+++.|.+.|++|+++|+++++.+.+.+.|..+ .++.+-+ +.++|.|+++++++.....+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~~----~~~aDvvi~~vp~~~~~~~v 76 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVISMLPASQHVEGL 76 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEECCSCHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeE----cCCHHHH----HhCCCeEEEECCCHHHHHHH
Confidence 588999999999999999999999999999999999888777542 2233222 25689999999876443333
Q ss_pred HH---HHH-HhCCCceEEEeeC--ChHH----HHHHHhCCCCee
Q 000968 1091 VW---ALS-KYFPNVKTFVRAH--DIDH----GLNLEKAGATAV 1124 (1207)
Q Consensus 1091 ~l---~aR-~l~P~i~IIaRa~--d~~~----~~~L~~aGAd~V 1124 (1207)
.. .+. .+.|+ .+++-.. .+.. ...+.+.|+..+
T Consensus 77 ~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~ 119 (302)
T 2h78_A 77 YLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAML 119 (302)
T ss_dssp HHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred HcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 32 222 23444 3444422 2332 333455676654
No 31
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.29 E-value=0.055 Score=59.61 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=70.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
++-|+|.|.+|..+++.|.+.|++|++.|+++++.+.+.+.|..+ .++.+-+ +.++|.|+++++++.....+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~~aDvvi~~vp~~~~~~~v 74 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER----AATPCEV----VESCPVTFAMLADPAAAEEV 74 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CSSHHHH----HHHCSEEEECCSSHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cCCHHHH----HhcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999999999999999999998888776533 1222221 24679999999976444333
Q ss_pred H---HHH-HHhCCCceEEEeeCC--hHH----HHHHHhCCCCee
Q 000968 1091 V---WAL-SKYFPNVKTFVRAHD--IDH----GLNLEKAGATAV 1124 (1207)
Q Consensus 1091 ~---l~a-R~l~P~i~IIaRa~d--~~~----~~~L~~aGAd~V 1124 (1207)
. ..+ ..+.|+ .+++-..+ +.. ...+.+.|+..+
T Consensus 75 ~~~~~~l~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 75 CFGKHGVLEGIGEG-RGYVDMSTVDPATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp HHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HcCcchHhhcCCCC-CEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 3 222 334455 34444333 222 234456676554
No 32
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.25 E-value=0.052 Score=60.36 Aligned_cols=89 Identities=18% Similarity=0.103 Sum_probs=63.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
.++-|+|.|.+|..+++.|.+.|++|+++|+++++.+.+.+.|..+ .++++-+ ++ +|.|+++++++.....
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~-aDvvi~~vp~~~~~~~ 86 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----ADSVADV----AA-ADLIHITVLDDAQVRE 86 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----CSSHHHH----TT-SSEEEECCSSHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----cCCHHHH----Hh-CCEEEEECCChHHHHH
Confidence 4689999999999999999999999999999999998888777543 2233322 23 8999999998754433
Q ss_pred HHHHHHH-hCCCceEEEeeC
Q 000968 1090 TVWALSK-YFPNVKTFVRAH 1108 (1207)
Q Consensus 1090 i~l~aR~-l~P~i~IIaRa~ 1108 (1207)
++..+.. +.|+ .+++-..
T Consensus 87 v~~~l~~~l~~g-~ivv~~s 105 (296)
T 3qha_A 87 VVGELAGHAKPG-TVIAIHS 105 (296)
T ss_dssp HHHHHHTTCCTT-CEEEECS
T ss_pred HHHHHHHhcCCC-CEEEEeC
Confidence 3333333 3344 3444333
No 33
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.22 E-value=0.017 Score=63.73 Aligned_cols=104 Identities=14% Similarity=0.082 Sum_probs=66.7
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec--------CCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD--------AGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD--------atd~evL~~AgI~~A~~VViatd 1082 (1207)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+++.|..+...+ .++++-+.+ .+.++|.|+++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH-QNEQVDLIIALTK 83 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT-TSCCCSEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc-cCCCCCEEEEEec
Confidence 5889999999999999999999999999999999988877675543311 112211111 2348999999998
Q ss_pred CcchhHHHHHHHHHh-CCCceEEEeeCChHHHHHH
Q 000968 1083 TPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNL 1116 (1207)
Q Consensus 1083 dd~~Ni~i~l~aR~l-~P~i~IIaRa~d~~~~~~L 1116 (1207)
.+. ...+...++.. .|+..++.-.+.....+.+
T Consensus 84 ~~~-~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l 117 (316)
T 2ew2_A 84 AQQ-LDAMFKAIQPMITEKTYVLCLLNGLGHEDVL 117 (316)
T ss_dssp HHH-HHHHHHHHGGGCCTTCEEEECCSSSCTHHHH
T ss_pred ccc-HHHHHHHHHHhcCCCCEEEEecCCCCcHHHH
Confidence 653 33333444443 3454444433433333333
No 34
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.21 E-value=0.063 Score=58.89 Aligned_cols=88 Identities=15% Similarity=0.085 Sum_probs=67.5
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCC-----hHHHHh---hhhCCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVR-----SDRVAI---GRALDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D-----~e~ve~---~r~~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.+++|.|. |.+|+.+++.|.+.|++|++++++ +++.+. +...++.++.||.+|++.|.++ ++.+|.||.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~ 83 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA-LKQVDVVISA 83 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH-HTTCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH-HhCCCEEEEC
Confidence 35888885 999999999999999999999998 444433 2456899999999999999876 5679999887
Q ss_pred cCCc------chhHHHHHHHHHhC
Q 000968 1081 LDTP------GANYRTVWALSKYF 1098 (1207)
Q Consensus 1081 tddd------~~Ni~i~l~aR~l~ 1098 (1207)
.... .....++..+++.+
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred CccccchhhHHHHHHHHHHHHhcC
Confidence 7532 23345556666654
No 35
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.20 E-value=0.028 Score=60.96 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=60.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
.+++|.|.|.+|+.+++.|.+.|++|++++++++..+.+...++.++.||.++.+ ..++|+||-+...
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc------cCCCCEEEECCCc
Confidence 4799999999999999999999999999999999888887889999999999944 6788999887754
No 36
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.19 E-value=0.041 Score=61.60 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=70.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
.++-|+|.|.+|..+++.|.+.|++|++.|+++++.+.+.+.|..+ .++++-+ +.++|.|+++++++.....
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~~~~~~~----~~~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----CESPAEV----IKKCKYTIAMLSDPCAALS 93 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CSSHHHH----HHHCSEEEECCSSHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----cCCHHHH----HHhCCEEEEEcCCHHHHHH
Confidence 4688999999999999999999999999999999998888777543 2233221 2468999999988644333
Q ss_pred HH---HHH-HHhCCCceEEEeeCC--hHH----HHHHHhCCCCee
Q 000968 1090 TV---WAL-SKYFPNVKTFVRAHD--IDH----GLNLEKAGATAV 1124 (1207)
Q Consensus 1090 i~---l~a-R~l~P~i~IIaRa~d--~~~----~~~L~~aGAd~V 1124 (1207)
++ ..+ ..+.|+ .+++-..+ +.. ...+.+.|+..+
T Consensus 94 v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 94 VVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFV 137 (310)
T ss_dssp HHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 33 111 223444 34444333 222 234556676554
No 37
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.18 E-value=0.069 Score=60.08 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=72.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
.++.|+|.|.+|..+++.|.+.|++|+++|+++++.+.+.+.|..+. ++++-+ +.++|.|+++++++.....
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~----~~~~e~----~~~aDvVi~~vp~~~~~~~ 103 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH----EQARAA----ARDADIVVSMLENGAVVQD 103 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE----SSHHHH----HTTCSEEEECCSSHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee----CCHHHH----HhcCCEEEEECCCHHHHHH
Confidence 36899999999999999999999999999999999998887775332 222222 3578999999988654433
Q ss_pred HHH---HHHHhCCCceEEEeeCC-hHHH----HHHHhCCCCeeec
Q 000968 1090 TVW---ALSKYFPNVKTFVRAHD-IDHG----LNLEKAGATAVVP 1126 (1207)
Q Consensus 1090 i~l---~aR~l~P~i~IIaRa~d-~~~~----~~L~~aGAd~VI~ 1126 (1207)
+.. .+..+.|+.-+|..... +... ..+.+.|+..+-.
T Consensus 104 v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 104 VLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDT 148 (320)
T ss_dssp HHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 332 23344555333333332 3322 3445667766543
No 38
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.17 E-value=0.04 Score=59.57 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=66.1
Q ss_pred ccccCC-CchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc----
Q 000968 1012 IILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP---- 1084 (1207)
Q Consensus 1012 VIIiG~-GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd---- 1084 (1207)
++|.|. |.+|+.+++.|.+. |++|++++++++..+.+...++.++.||.+|++.+.++ ++.+|.||-+....
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA-LQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEEEECC-------
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH-HhCCCEEEEeCCCCchHH
Confidence 677776 99999999999998 99999999998876666667889999999999999876 46789988766432
Q ss_pred -chhHHHHHHHHHhCC
Q 000968 1085 -GANYRTVWALSKYFP 1099 (1207)
Q Consensus 1085 -~~Ni~i~l~aR~l~P 1099 (1207)
.....++..+++.+.
T Consensus 81 ~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 81 APQHRNVINAAKAAGV 96 (286)
T ss_dssp -CHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 122344555666553
No 39
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.15 E-value=0.056 Score=58.80 Aligned_cols=89 Identities=15% Similarity=0.021 Sum_probs=70.0
Q ss_pred cccccC-CCchHHHHHHHHHhc-CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc---c
Q 000968 1011 HIILCG-FGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP---G 1085 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~-gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd---~ 1085 (1207)
+++|.| .|.+|+.+++.|.+. |.+|+++.++++....+...++.++.||.+|++.|.++ ++.+|.||.+.... .
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA-FKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHH-TTTCSEEEECCCCCCSHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHH-HhCCCEEEEeCCCCccch
Confidence 367888 599999999999998 99999999999887777778999999999999999876 46889988876542 1
Q ss_pred hh----HHHHHHHHHhCCC
Q 000968 1086 AN----YRTVWALSKYFPN 1100 (1207)
Q Consensus 1086 ~N----i~i~l~aR~l~P~ 1100 (1207)
.| ..++..+++.+..
T Consensus 81 ~~~~~~~~l~~aa~~~gv~ 99 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVA 99 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHHHHcCCC
Confidence 22 3345566666543
No 40
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.13 E-value=0.072 Score=59.54 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=69.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
.++-|+|.|.+|..+++.|.+.|+++++.|+++++.+.+.+.|... ..+++-+ ++++|.|+++++++.....
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~e~----~~~aDvVi~~vp~~~~~~~ 81 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----CESVKAA----LSASPATIFVLLDNHATHE 81 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----CSSHHHH----HHHSSEEEECCSSHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhcCCEEEEEeCCHHHHHH
Confidence 4688999999999999999999999999999999998887766532 2233222 2458999999988753333
Q ss_pred HHH--HHHHhCCCceEEEeeCC--hHH----HHHHHhCCCCee
Q 000968 1090 TVW--ALSKYFPNVKTFVRAHD--IDH----GLNLEKAGATAV 1124 (1207)
Q Consensus 1090 i~l--~aR~l~P~i~IIaRa~d--~~~----~~~L~~aGAd~V 1124 (1207)
+.. .+....|+ .+++-..+ +.. ...+.+.|+.++
T Consensus 82 v~~~~~l~~~~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~v 123 (306)
T 3l6d_A 82 VLGMPGVARALAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYV 123 (306)
T ss_dssp HHTSTTHHHHTTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEE
T ss_pred HhcccchhhccCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 322 23344455 34443332 222 234455666543
No 41
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.12 E-value=0.069 Score=58.99 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=68.4
Q ss_pred cccccccCC-CchHHHHHHHHHhcCCCeEeecCChH-HHH---hhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD-RVA---IGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1009 k~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e-~ve---~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
..+++|.|. |.+|+.+++.|.+.|.+|+++++++. ..+ .+...++.++.||.+|++.|.++ ++.+|.||.+...
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a-~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVEL-MKKVDVVISALAF 89 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCCG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHH-HcCCCEEEECCch
Confidence 346889985 99999999999999999999999874 322 33457899999999999998876 4678999887754
Q ss_pred c--chhHHHHHHHHHhC
Q 000968 1084 P--GANYRTVWALSKYF 1098 (1207)
Q Consensus 1084 d--~~Ni~i~l~aR~l~ 1098 (1207)
. .....++..+++.+
T Consensus 90 ~~~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 90 PQILDQFKILEAIKVAG 106 (318)
T ss_dssp GGSTTHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhcC
Confidence 3 23345556666665
No 42
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.03 E-value=0.072 Score=59.38 Aligned_cols=113 Identities=19% Similarity=0.129 Sum_probs=79.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+.|+|+|++|+.+++.|...|.++++.|+++++.+.+...|..++. .+.+.++ +.++|.|+.+++....|..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~-l~~aDvVi~~~p~~~i~~~ 231 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEH-VKDIDICINTIPSMILNQT 231 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHH-STTCSEEEECCSSCCBCHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHH-hhCCCEEEECCChhhhCHH
Confidence 468999999999999999999999999999999887766566654432 1223332 4789999999988655533
Q ss_pred HHHHHHHhCCCceEEEeeCChH--HHHHHHhCCCCeeecCCcHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHDID--HGLNLEKAGATAVVPETLEP 1131 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~--~~~~L~~aGAd~VI~p~~ea 1131 (1207)
..+.+.|...+|-.++.+. ..+..+..|+..+..|....
T Consensus 232 ---~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~pg~~g 272 (300)
T 2rir_A 232 ---VLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLAPGLPG 272 (300)
T ss_dssp ---HHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCHHH
T ss_pred ---HHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEECCCCCC
Confidence 2345556655555555321 13566777987776776544
No 43
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.99 E-value=0.057 Score=62.21 Aligned_cols=112 Identities=19% Similarity=0.129 Sum_probs=81.5
Q ss_pred ccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1008 lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
...+++|+|.|.+|+.+++.|.+. .++++.|+++++.+.+.... ..+..|..+.+.|.++ +.++|.||.+++... +
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~-~~~~~d~~~~~~l~~l-l~~~DvVIn~~P~~~-~ 90 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFA-TPLKVDASNFDKLVEV-MKEFELVIGALPGFL-G 90 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTS-EEEECCTTCHHHHHHH-HTTCSCEEECCCHHH-H
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhC-CeEEEecCCHHHHHHH-HhCCCEEEECCChhh-h
Confidence 345799999999999999999888 89999999999998776543 4566788898888876 678999999987553 3
Q ss_pred HHHHHHHHHhCCCceEEEeeCC----hHHHHHHHhCCCCeee
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVV 1125 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d----~~~~~~L~~aGAd~VI 1125 (1207)
..++..+-+.+ ..++--+.+ .+..+..+++|+..+.
T Consensus 91 ~~v~~a~l~~G--~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 FKSIKAAIKSK--VDMVDVSFMPENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHHHHHHHHTT--CCEEECCCCSSCGGGGHHHHHHTTCEEEC
T ss_pred HHHHHHHHHhC--CeEEEccCCcHHHHHHHHHHHHcCCEEEE
Confidence 34444444443 334443432 2456777888987664
No 44
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.93 E-value=0.016 Score=64.87 Aligned_cols=95 Identities=15% Similarity=0.094 Sum_probs=62.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecC--ChHHHHhhhhCCCCEEEe------cCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDV--RSDRVAIGRALDLPVYFG------DAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~--D~e~ve~~r~~g~~vi~G------Datd~evL~~AgI~~A~~VViatd 1082 (1207)
++.|+|.|.+|..++..|.+.|++|+++|+ ++++.+.+++.+....+| ..++++.+.++ +..+|.|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~D~vi~~v~ 80 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC-LENAEVVLLGVS 80 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH-HTTCSEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH-HhcCCEEEEcCC
Confidence 478999999999999999999999999999 999998887765421111 12222123221 467999999998
Q ss_pred CcchhHHHHHHHHHhCCCceEEEee
Q 000968 1083 TPGANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1083 dd~~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
.+... .++..++.+.|+..++...
T Consensus 81 ~~~~~-~v~~~i~~l~~~~~vv~~~ 104 (335)
T 1txg_A 81 TDGVL-PVMSRILPYLKDQYIVLIS 104 (335)
T ss_dssp GGGHH-HHHHHHTTTCCSCEEEECC
T ss_pred hHHHH-HHHHHHhcCCCCCEEEEEc
Confidence 87433 2222333244554444433
No 45
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.92 E-value=0.023 Score=59.23 Aligned_cols=69 Identities=16% Similarity=0.092 Sum_probs=59.7
Q ss_pred ccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1012 IILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1012 VIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
++|.|. |.+|+.+++.|.+.|.+|++++++++..+.+...++.++.||.+|++. + -+..+|.||.+...
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~--~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-A--DLDSVDAVVDALSV 72 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-H--HHTTCSEEEECCCC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-h--hcccCCEEEECCcc
Confidence 788887 999999999999999999999999998887777789999999999887 3 34578998887754
No 46
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=94.90 E-value=0.017 Score=72.42 Aligned_cols=136 Identities=14% Similarity=0.086 Sum_probs=90.2
Q ss_pred ccccccccccCCCch------HHHHHHHHHhcCC------CeEeecCChHHHHhhhh----CCCCEEEecCCCHHHHHhc
Q 000968 1006 DDLQDHIILCGFGRV------GQIIAQLLSERLI------PFVALDVRSDRVAIGRA----LDLPVYFGDAGSREVLHKV 1069 (1207)
Q Consensus 1006 ~~lk~hVIIiG~Grv------G~~Ia~~L~~~gi------~vvVID~D~e~ve~~r~----~g~~vi~GDatd~evL~~A 1069 (1207)
.++++|+|||++|.- =+.++.=|+..+. |+|++.......+.++. ..+.++.|++...+.|++|
T Consensus 398 ~~~~nHivvC~~~~~~~~~~gl~~fv~PLRa~~~~~~~l~~IVil~~~~~~~~~w~~i~~Fp~Vy~v~Gspl~~~dL~~a 477 (798)
T 3naf_A 398 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAV 477 (798)
T ss_dssp SCCCSCEEEEEECCSSSCCCCTHHHHHHHHCSSSCSTTCCCEEEEBCHHHHHHHHTTTTTSSSEEBCBSCTTCHHHHHHT
T ss_pred hccCCCEEEEEecCCCcchhhhHHhhhhhhcccCCccccCCEEEECCCCcCHHHHHHhhCCCceEEecCCCCCHHHHHHh
Confidence 467899999999853 3677888876554 67777653222222321 2466778999999999999
Q ss_pred CccccCEEEEecCC----------cchhHHHHHHHH------------------------------------------Hh
Q 000968 1070 GAERACAAAITLDT----------PGANYRTVWALS------------------------------------------KY 1097 (1207)
Q Consensus 1070 gI~~A~~VViatdd----------d~~Ni~i~l~aR------------------------------------------~l 1097 (1207)
||.+|+.+|+..+. |..++...+.++ ..
T Consensus 478 nI~~a~~~VIls~~~~~~~~~~l~D~~~il~~lni~~m~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (798)
T 3naf_A 478 NINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITT 557 (798)
T ss_dssp TSTTCSEEEEEESSCTTCCCSSSTTHHHHHHHHHHHHCCCC--------------------------------------C
T ss_pred CHHhCCEEEEEcCCCCCCCChhhhhHHHHHhhhhhhhhccccccccccccccccccccccccccccccccchhhcccccc
Confidence 99999999998543 123232222222 34
Q ss_pred CCCceEEEeeCChHHHHHHHh-----CCCCeeecCCcHHHHHHHHHHHH
Q 000968 1098 FPNVKTFVRAHDIDHGLNLEK-----AGATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1098 ~P~i~IIaRa~d~~~~~~L~~-----aGAd~VI~p~~eaal~La~~iL~ 1141 (1207)
+|+++|+..-.++.+++-|.. .+.+....|.+.+|......+|.
T Consensus 558 ~~~ipiitEL~~~~ni~fl~~~~~~~~~~~~~~~~~fa~G~~fs~s~ld 606 (798)
T 3naf_A 558 GVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLD 606 (798)
T ss_dssp TTCCCEEEEESSTTGGGGGSCCTTCCTTCCGGGSHHHHHTSEEETTHHH
T ss_pred CCCCceEEEecCCCccccccccCCCccCcceeecccccccceeHHHHHH
Confidence 688999999999988887754 34455555556555544444443
No 47
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.89 E-value=0.098 Score=57.20 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=67.4
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCCh-------HHHHh---hhhCCCCEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRS-------DRVAI---GRALDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~-------e~ve~---~r~~g~~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
+++|.|. |.+|+.+++.|.+.|.+|+++++++ ++.+. +...++.++.||.+|++.|.++ ++.+|.||.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~ 82 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKA-IKQVDIVIC 82 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHH-HhCCCEEEE
Confidence 5788886 9999999999999999999999987 54432 3456899999999999998876 457899988
Q ss_pred ecCCc--chhHHHHHHHHHhC
Q 000968 1080 TLDTP--GANYRTVWALSKYF 1098 (1207)
Q Consensus 1080 atddd--~~Ni~i~l~aR~l~ 1098 (1207)
+.... .....++..+++.+
T Consensus 83 ~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 83 AAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp CSSSSCGGGHHHHHHHHHHHC
T ss_pred CCcccccccHHHHHHHHHhcC
Confidence 87643 23344555666654
No 48
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.82 E-value=0.091 Score=57.46 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=67.8
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCCh------HHHH---hhhhCCCCEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS------DRVA---IGRALDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~------e~ve---~~r~~g~~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
..++|.|. |.+|+.+++.|.+.|.+++++++++ ++.+ .+...|+.++.||.+|++.|.++ ++.+|.||.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~ 83 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEA-VKNVDVVIS 83 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHH-HHTCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHH-HcCCCEEEE
Confidence 35888986 9999999999999999999999973 3333 23456899999999999999876 567899988
Q ss_pred ecCCc--chhHHHHHHHHHhC
Q 000968 1080 TLDTP--GANYRTVWALSKYF 1098 (1207)
Q Consensus 1080 atddd--~~Ni~i~l~aR~l~ 1098 (1207)
+.... .....++..+++.+
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHC
T ss_pred CCcchhhhhHHHHHHHHHhcC
Confidence 87643 23345566666665
No 49
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.80 E-value=0.063 Score=58.65 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=53.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|.|.+|..++..|.. |++++++|+++++.+.+.+.|..+.. ..+ -+.++|.|+++++++...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~----~~~-----~~~~~D~vi~~v~~~~~~ 69 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV----PLE-----RVAEARVIFTCLPTTREV 69 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC----CGG-----GGGGCSEEEECCSSHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC----HHH-----HHhCCCEEEEeCCChHHH
Confidence 47899999999999999999 99999999999998887766655431 112 245789999999887533
No 50
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.73 E-value=0.14 Score=57.00 Aligned_cols=111 Identities=15% Similarity=0.072 Sum_probs=76.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+.|+|+|++|+.+++.|...|.++++.|+++++.+.+...|..++. .+.+.++ +.++|.|+.+++....|..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~-----~~~l~~~-l~~aDvVi~~~p~~~i~~~ 229 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFH-----ISKAAQE-LRDVDVCINTIPALVVTAN 229 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEE-----GGGHHHH-TTTCSEEEECCSSCCBCHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecC-----hhhHHHH-hcCCCEEEECCChHHhCHH
Confidence 468999999999999999999999999999999887666666655431 1223322 4689999999987655543
Q ss_pred HHHHHHHhCCCceEEEeeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1090 TVWALSKYFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
..+.+.|...+|-.++.+ ......+..|+..+..|..
T Consensus 230 ---~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 230 ---VLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKALLVPGL 268 (293)
T ss_dssp ---HHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCH
T ss_pred ---HHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEEECCCC
Confidence 234455665555444422 1236667789876655554
No 51
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.72 E-value=0.076 Score=58.49 Aligned_cols=69 Identities=19% Similarity=0.121 Sum_probs=54.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++-|+|.|.+|..+++.|.+.|++|+++|+++++.+.+.+.|..+ ..+++-+ ++++|.|+++++++...
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~~advvi~~v~~~~~~ 71 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----ASSPAEV----CAACDITIAMLADPAAA 71 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----CSCHHHH----HHHCSEEEECCSSHHHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cCCHHHH----HHcCCEEEEEcCCHHHH
Confidence 577899999999999999999999999999999998887766532 1233222 24679999999886433
No 52
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.72 E-value=0.095 Score=57.70 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=54.2
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..+++.|...|++++++|+++++.+.+.+.|..+ ..+.+-+ +.++|.|+++++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----ASTAKAI----AEQCDVIITMLPNSPH 74 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSSHHHH----HHHCSEEEECCSSHHH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhCCCEEEEECCCHHH
Confidence 588999999999999999999999999999999998887776532 2233221 2468999999987643
No 53
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.68 E-value=0.1 Score=58.52 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=69.8
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCCh----HHHH---hhhhCCCCEEEecCCCHHHHHhcCcc--ccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS----DRVA---IGRALDLPVYFGDAGSREVLHKVGAE--RACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~----e~ve---~~r~~g~~vi~GDatd~evL~~AgI~--~A~~VVi 1079 (1207)
.+|+|.|. |.+|+.+++.|.+.|++++++++++ ++.+ .+...++.++.||.+|++.|.++ ++ .+|.||.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~~~d~Vi~ 89 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKI-LKEHEIDIVVS 89 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HHHTTCCEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHH-HhhCCCCEEEE
Confidence 46899998 9999999999999999999999976 4443 34567999999999999998876 35 7899888
Q ss_pred ecCC--cchhHHHHHHHHHhC
Q 000968 1080 TLDT--PGANYRTVWALSKYF 1098 (1207)
Q Consensus 1080 atdd--d~~Ni~i~l~aR~l~ 1098 (1207)
+... ......++..+++.+
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHC
T ss_pred CCchhhHHHHHHHHHHHHHcC
Confidence 8764 234456666777766
No 54
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.68 E-value=0.042 Score=58.38 Aligned_cols=74 Identities=11% Similarity=0.207 Sum_probs=62.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcC-CCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~g-i~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
.+++|.| .|.+|+.+++.|.+.| ..|++++++++..+.....++.++.+|.+|++.++++ ++.+|.||.+...+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQA-MQGQDIVYANLTGE 99 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHH-HTTCSEEEEECCST
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHH-hcCCCEEEEcCCCC
Confidence 4688888 6999999999999999 8999999999887666666889999999999998876 45789998776654
No 55
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.67 E-value=0.12 Score=56.88 Aligned_cols=73 Identities=19% Similarity=0.178 Sum_probs=55.7
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
++.|+|.|.+|..+++.|...|++++++|+++++.+.+.+.|..+ ..+.+-+ +.++|.|+++++++.....+
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~vp~~~~~~~v 77 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CENNQKV----AAASDIIFTSLPNAGIVETV 77 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSSHHHH----HHHCSEEEECCSSHHHHHHH
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhCCCEEEEECCCHHHHHHH
Confidence 588999999999999999999999999999999998887766542 1233221 24689999999876544333
Q ss_pred H
Q 000968 1091 V 1091 (1207)
Q Consensus 1091 ~ 1091 (1207)
.
T Consensus 78 ~ 78 (301)
T 3cky_A 78 M 78 (301)
T ss_dssp H
T ss_pred H
Confidence 3
No 56
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.61 E-value=0.034 Score=57.61 Aligned_cols=70 Identities=14% Similarity=0.113 Sum_probs=59.0
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
+++|.| .|.+|+.+++.|.+.|++|++++++++..+.+. .++.++.||.+|++. + -+..+|.||.+....
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~--~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-S--DLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-H--HHTTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-h--hhcCCCEEEECCcCC
Confidence 478888 499999999999999999999999998887665 789999999999877 3 346789998877543
No 57
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.56 E-value=0.12 Score=56.92 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=67.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCCh------HHHHh---hhhCCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRS------DRVAI---GRALDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~------e~ve~---~r~~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
+++|.|. |.+|+.+++.|.+.|++|+++++++ ++.+. +...++.++.||.+|++.|.++ ++.+|.||.+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a-~~~~d~vi~~ 84 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSV-LKQVDIVISA 84 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEEC
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHH-HcCCCEEEEC
Confidence 5788885 9999999999999999999999986 33332 3456899999999999999876 4678999887
Q ss_pred cCCc--chhHHHHHHHHHhC
Q 000968 1081 LDTP--GANYRTVWALSKYF 1098 (1207)
Q Consensus 1081 tddd--~~Ni~i~l~aR~l~ 1098 (1207)
.... .....++..+++.+
T Consensus 85 a~~~~~~~~~~l~~aa~~~g 104 (321)
T 3c1o_A 85 LPFPMISSQIHIINAIKAAG 104 (321)
T ss_dssp CCGGGSGGGHHHHHHHHHHC
T ss_pred CCccchhhHHHHHHHHHHhC
Confidence 7543 33445556666665
No 58
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.54 E-value=0.14 Score=55.82 Aligned_cols=87 Identities=15% Similarity=0.047 Sum_probs=61.6
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCE-EEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPV-YFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~v-i~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
++.|+|.|.+|..+++.|.+.|++++++|+++++.+.+.+.|... +. .+ +.++ .++|.|+++++.+. ...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~--~~~D~vi~av~~~~-~~~ 72 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG---QD---LSLL--QTAKIIFLCTPIQL-ILP 72 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE---SC---GGGG--TTCSEEEECSCHHH-HHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCcccc---CC---HHHh--CCCCEEEEECCHHH-HHH
Confidence 477999999999999999999999999999999998887766531 22 12 3344 68999999998652 233
Q ss_pred HHHHHHHh-CCCceEEEee
Q 000968 1090 TVWALSKY-FPNVKTFVRA 1107 (1207)
Q Consensus 1090 i~l~aR~l-~P~i~IIaRa 1107 (1207)
++..++.. .|+ .+++.+
T Consensus 73 ~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 73 TLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp HHHHHGGGSCTT-CEEEEC
T ss_pred HHHHHHhhCCCC-CEEEEC
Confidence 33344433 344 355555
No 59
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.46 E-value=0.085 Score=55.15 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=61.5
Q ss_pred ccccccC-CCchHHHHHHHHH-hcCCCeEeecCChH-HHHhh--hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLS-ERLIPFVALDVRSD-RVAIG--RALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~-~~gi~vvVID~D~e-~ve~~--r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
.+++|.| .|.+|+.+++.|. +.|++|++++++++ +.+.+ ...+..++.+|.+|++.++++ ++.+|.+|.+...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQA-VTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHH-HTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHH-HcCCCEEEEcCCC
Confidence 3588888 5999999999999 89999999999998 76655 456788999999999998876 3678999887764
No 60
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.45 E-value=0.1 Score=58.24 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=69.9
Q ss_pred ccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1008 lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
+..+|=+||.|.+|..+++.|.+.|+++++.|+++++++.+.+.|..+. .++ .+ =++.++.|+++.+++...
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~---~e-~~~~~dvvi~~l~~~~~~ 75 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV----ENA---ID-AITPGGIVFSVLADDAAV 75 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC----SSG---GG-GCCTTCEEEECCSSHHHH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe----CCH---HH-HHhcCCceeeeccchhhH
Confidence 3446889999999999999999999999999999999998888775432 122 11 136789999999887543
Q ss_pred HHHH--HHHHHhCCC-ceEEEeeCChHH----HHHHHhCCCCeeecCC
Q 000968 1088 YRTV--WALSKYFPN-VKTFVRAHDIDH----GLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1088 i~i~--l~aR~l~P~-i~IIaRa~d~~~----~~~L~~aGAd~VI~p~ 1128 (1207)
.... ..+....|+ +.|-..+.+++. ...+.+.|+.++-.|-
T Consensus 76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCc
Confidence 3221 234445554 223333334443 4455677887776554
No 61
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.44 E-value=0.063 Score=56.10 Aligned_cols=70 Identities=20% Similarity=0.131 Sum_probs=59.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCC-HHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd-~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.| .|.+|+.+++.|.+.|++|++++++++..+.. .++.++.||.+| ++.+.++ +++.|.||-+...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~-~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQ-LHGMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTT-TTTCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHH-HcCCCEEEECCcC
Confidence 467787 79999999999999999999999998765433 578999999999 9888876 5689999987754
No 62
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.41 E-value=0.2 Score=56.02 Aligned_cols=127 Identities=17% Similarity=0.080 Sum_probs=79.2
Q ss_pred cccccCCCchHHHHHHHHHhcC--CCeEeecCChHHHHhhhh-C---------CCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL--IPFVALDVRSDRVAIGRA-L---------DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g--i~vvVID~D~e~ve~~r~-~---------g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
++.|+|.|.+|..++..|...| .+++++|.++++.+.... . ...+..+ +.+ .+..||.||
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~~-----~~~~aDvVi 74 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWA-----ALADADVVI 74 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGG-----GGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CHH-----HhCCCCEEE
Confidence 5789999999999999999988 689999999988765431 1 1222222 322 357899999
Q ss_pred EecCCcch---------------h----HHHHHHHHHhCCCceEEEeeCChHHH-H-HHHh---CCCCeeecC-CcHHHH
Q 000968 1079 ITLDTPGA---------------N----YRTVWALSKYFPNVKTFVRAHDIDHG-L-NLEK---AGATAVVPE-TLEPSL 1133 (1207)
Q Consensus 1079 iatddd~~---------------N----i~i~l~aR~l~P~i~IIaRa~d~~~~-~-~L~~---aGAd~VI~p-~~eaal 1133 (1207)
+++..+.. | ..++..+++..|+..++. ..++... . .+.+ .....|+-- +..-..
T Consensus 75 iav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rvig~gt~ld~~ 153 (309)
T 1hyh_A 75 STLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV-ISNPVDVITALFQHVTGFPAHKVIGTGTLLDTA 153 (309)
T ss_dssp ECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred EecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE-EcCcHHHHHHHHHHhcCCCHHHEeecCccchHH
Confidence 99988653 3 245556666778876666 5554433 2 2333 344456644 333333
Q ss_pred HHHHHHHHHcCCC
Q 000968 1134 QLAAAVLAQAKLP 1146 (1207)
Q Consensus 1134 ~La~~iL~~lg~~ 1146 (1207)
++...+-..++++
T Consensus 154 r~~~~~a~~l~~~ 166 (309)
T 1hyh_A 154 RMQRAVGEAFDLD 166 (309)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCC
Confidence 4444444444443
No 63
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.40 E-value=0.068 Score=59.66 Aligned_cols=130 Identities=19% Similarity=0.153 Sum_probs=82.8
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHH--hhh-hCCC------CEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA--IGR-ALDL------PVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve--~~r-~~g~------~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|...|. +++++|.++++.+ ... ..+. .+..+ ++.+ .+..||.||+
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~-----~~~~aD~Vii 81 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE-----ICRDADMVVI 81 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG-----GGTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH-----HhCCCCEEEE
Confidence 68999999999999999999998 9999999987765 221 2222 22222 1222 3568999999
Q ss_pred ecCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHHHHHHH----hCCCCeeecC-CcHHHHHHHHHH
Q 000968 1080 TLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDHGLNLE----KAGATAVVPE-TLEPSLQLAAAV 1139 (1207)
Q Consensus 1080 atddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~~~L~----~aGAd~VI~p-~~eaal~La~~i 1139 (1207)
++..+. .|. .++..+++..|+..++.-++-......+. ..+.+.|+.. +...+.++...+
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~~~~l~~~r~~~~~ 161 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTNLDSARLRFLI 161 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEECTTHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHHHHhcCCCHHHEeeccccHhHHHHHHHH
Confidence 995442 222 34555666678866665555444444443 3566788855 555555555555
Q ss_pred HHHcCCCH
Q 000968 1140 LAQAKLPA 1147 (1207)
Q Consensus 1140 L~~lg~~~ 1147 (1207)
-..+++++
T Consensus 162 a~~~~v~~ 169 (319)
T 1lld_A 162 AQQTGVNV 169 (319)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCH
Confidence 55555554
No 64
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.34 E-value=0.18 Score=60.41 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=72.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCC---CCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD---LPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g---~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++-|+|.|.+|..++..|.+.|++|++.|+++++++.+.+.+ ..+ .+-.+-.+... .++++|.|+++++++...
T Consensus 6 kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i-~~~~s~~e~v~--~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 6 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV-VGAQSLKEMVS--KLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC-EECSSHHHHHH--TBCSSCEEEECSCSSHHH
T ss_pred EEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCce-eccCCHHHHHh--hccCCCEEEEecCChHHH
Confidence 588999999999999999999999999999999998886653 222 22222233333 246799999999887444
Q ss_pred HHHHHHHHHh-CCCceEEEeeCCh------HHHHHHHhCCCCee
Q 000968 1088 YRTVWALSKY-FPNVKTFVRAHDI------DHGLNLEKAGATAV 1124 (1207)
Q Consensus 1088 i~i~l~aR~l-~P~i~IIaRa~d~------~~~~~L~~aGAd~V 1124 (1207)
..++..+... .|+ .+|+-..+. +....+.+.|+..+
T Consensus 83 ~~vl~~l~~~L~~g-~iIId~st~~~~~t~~~~~~l~~~Gi~fv 125 (484)
T 4gwg_A 83 DDFIEKLVPLLDTG-DIIIDGGNSEYRDTTRRCRDLKAKGILFV 125 (484)
T ss_dssp HHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhcCCC-CEEEEcCCCCchHHHHHHHHHHhhccccc
Confidence 3343444433 344 455544432 22344556666543
No 65
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.32 E-value=0.18 Score=58.05 Aligned_cols=107 Identities=17% Similarity=0.160 Sum_probs=72.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCH-HHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSR-EVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~-evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
-++-|+|.|.+|..+++.|.+.|++|+++|+++++++.+.+.|... ..+. +.+..+ +.+|.|+++++++ ...
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a--~~~DvVi~~vp~~-~v~ 95 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKL--VKPRVVWLMVPAA-VVD 95 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHS--CSSCEEEECSCGG-GHH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcC--CCCCEEEEeCCHH-HHH
Confidence 3688999999999999999999999999999999999888777542 2333 333333 3459999999887 333
Q ss_pred HHHHHHHH-hCCCceEEEeeCC------hHHHHHHHhCCCCee
Q 000968 1089 RTVWALSK-YFPNVKTFVRAHD------IDHGLNLEKAGATAV 1124 (1207)
Q Consensus 1089 ~i~l~aR~-l~P~i~IIaRa~d------~~~~~~L~~aGAd~V 1124 (1207)
.++..+.. +.|+ .+|+-..+ .+-...+.+.|+..+
T Consensus 96 ~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 96 SMLQRMTPLLAAN-DIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp HHHHHHGGGCCTT-CEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhhCCCC-CEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 33333333 3344 45554433 223344556676554
No 66
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.31 E-value=0.11 Score=59.48 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=83.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
+|+|+|.|.+|+.+++.|.+ +.++.+.|.+.++.+.+++ ....+..|++|.+.|.++ +.++|.||.+++.. .+..+
T Consensus 18 kilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~-~~~~DvVi~~~p~~-~~~~v 93 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEV-MKEFELVIGALPGF-LGFKS 93 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHH-HTTCSEEEECCCGG-GHHHH
T ss_pred EEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHH-HhCCCEEEEecCCc-ccchH
Confidence 49999999999999999965 5789999999999887754 356778899999999887 78899999988765 56667
Q ss_pred HHHHHHhCCCceEEEeeCC----hHHHHHHHhCCCCeeec
Q 000968 1091 VWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVP 1126 (1207)
Q Consensus 1091 ~l~aR~l~P~i~IIaRa~d----~~~~~~L~~aGAd~VI~ 1126 (1207)
+.++-+...+ .+-.+.+ .+..+..+++|+..+..
T Consensus 94 ~~~~~~~g~~--yvD~s~~~~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 94 IKAAIKSKVD--MVDVSFMPENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp HHHHHHHTCE--EEECCCCSSCGGGGHHHHHHTTCEEECC
T ss_pred HHHHHhcCcc--eEeeeccchhhhhhhhhhccCCceeeec
Confidence 7666666543 3333333 23445667888776653
No 67
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.29 E-value=0.091 Score=55.50 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=58.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCC-CEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL-PVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~-~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.|. |.+|+.+++.|.+.|++|++++++++..+.+...++ .++.||.+ .++.+. +..+|.||-+...
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~--~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHA--FASIDAVVFAAGS 94 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGG--GTTCSEEEECCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHH--HcCCCEEEECCCC
Confidence 5788887 999999999999999999999999999888887899 99999999 333333 3478999887753
No 68
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.24 E-value=1.6 Score=62.69 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=46.0
Q ss_pred chhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000968 265 EEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIML 331 (1207)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~~a~~a~~~~~~~m~ 331 (1207)
-+.+++..|+++..+.++.|.+++++|..++.+..+||++-+......++-+..+.+.+.-+..+..
T Consensus 2011 Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~ 2077 (3245)
T 3vkg_A 2011 PLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIA 2077 (3245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777777788888888888888888777777777777777666666655555555554444433
No 69
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.22 E-value=0.034 Score=60.60 Aligned_cols=88 Identities=13% Similarity=0.089 Sum_probs=65.4
Q ss_pred cccccccCCCchHHHHHHHHHhcCC-CeEeecCCh-------------------HHHHhhh----h--CCCC--EEEecC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRS-------------------DRVAIGR----A--LDLP--VYFGDA 1060 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~-------------------e~ve~~r----~--~g~~--vi~GDa 1060 (1207)
..+|+|+|.|.+|..+++.|...|+ .++++|.|. .+++.+. . .++. .+.++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3589999999999999999999998 799999997 5655442 2 2333 333444
Q ss_pred CCHHHHHhcCccccCEEEEecCCcchhHHHHHHHHHhC
Q 000968 1061 GSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYF 1098 (1207)
Q Consensus 1061 td~evL~~AgI~~A~~VViatddd~~Ni~i~l~aR~l~ 1098 (1207)
+ ++.+.+. +.++|.||.++++.+.+..+...+++.+
T Consensus 111 ~-~~~~~~~-~~~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 111 D-DAELAAL-IAEHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp C-HHHHHHH-HHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred C-HhHHHHH-HhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 4 3333333 5789999999999888888888887765
No 70
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.19 E-value=0.22 Score=58.91 Aligned_cols=112 Identities=10% Similarity=0.002 Sum_probs=76.8
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC--CCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~--g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
+++|+|.|.+|+.+++.|.+.|.++++.|+++++.+.+... +...+.+|.++.+.+.++ +.++|.||.+++.....
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~-l~~~DvVIn~a~~~~~~- 82 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE-VAKHDLVISLIPYTFHA- 82 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHH-HTTSSEEEECCC--CHH-
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHH-HcCCcEEEECCccccch-
Confidence 57888999999999999999999999999999988766432 355788999998877654 45899999998764322
Q ss_pred HHHHHHHHhCCCceEEEeeCC----hHHHHHHHhCCCCeeec
Q 000968 1089 RTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVP 1126 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d----~~~~~~L~~aGAd~VI~ 1126 (1207)
.+...+-+ +..+++..+.+ ....+..+++|+..+..
T Consensus 83 ~i~~a~l~--~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g 122 (450)
T 1ff9_A 83 TVIKSAIR--QKKHVVTTSYVSPAMMELDQAAKDAGITVMNE 122 (450)
T ss_dssp HHHHHHHH--HTCEEEESSCCCHHHHHTHHHHHHTTCEEECS
T ss_pred HHHHHHHh--CCCeEEEeecccHHHHHHHHHHHHCCCeEEeC
Confidence 12222222 23345544432 23445567789875543
No 71
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.15 E-value=0.17 Score=56.98 Aligned_cols=129 Identities=20% Similarity=0.236 Sum_probs=81.2
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhhhh---C------CCCEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRA---L------DLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~r~---~------g~~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|...|. +++++|.++++.+.... . ...+.. ++.+ .+..||.||+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~-----~~~~aDvVii 73 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA-----DLKGSDVVIV 73 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG-----GGTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH-----HhCCCCEEEE
Confidence 47899999999999999999998 99999999987765421 1 122222 2322 2578999999
Q ss_pred ecCCcch-----------h----HHHHHHHHHhCCCceEEEeeCChHHHH-HHHhC---CCCeeecC-CcHHHHHHHHHH
Q 000968 1080 TLDTPGA-----------N----YRTVWALSKYFPNVKTFVRAHDIDHGL-NLEKA---GATAVVPE-TLEPSLQLAAAV 1139 (1207)
Q Consensus 1080 atddd~~-----------N----i~i~l~aR~l~P~i~IIaRa~d~~~~~-~L~~a---GAd~VI~p-~~eaal~La~~i 1139 (1207)
+++.+.. | ..++..+++..|+..++.-++-..... .+.+. ....|+-- +..-..++...+
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~~t~ld~~r~~~~l 153 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGSGTVLDTARLRTLI 153 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEeeCccHHHHHHHHHH
Confidence 9986542 2 345556677789877776544444332 23222 45567633 333344455555
Q ss_pred HHHcCCCH
Q 000968 1140 LAQAKLPA 1147 (1207)
Q Consensus 1140 L~~lg~~~ 1147 (1207)
-..+++++
T Consensus 154 a~~lgv~~ 161 (319)
T 1a5z_A 154 AQHCGFSP 161 (319)
T ss_dssp HHHHTCCG
T ss_pred HHHhCcCH
Confidence 55555443
No 72
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.09 E-value=0.054 Score=59.34 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=60.2
Q ss_pred ccccccCC-CchHHHHHHHHHhcC-CCeEeecCChHHH--HhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV--AIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~g-i~vvVID~D~e~v--e~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.+++|.|. |.+|+.+++.|.+.| .+|++++++++.. +.+...++.++.||.+|++.|.++ ++.+|.||.+..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~ 81 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA-LNGAYATFIVTN 81 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH-HhcCCEEEEeCC
Confidence 46888887 999999999999998 9999999987653 344567899999999999999876 467899888764
No 73
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.07 E-value=0.075 Score=57.62 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=61.6
Q ss_pred cccccCCCchHHHHHHHHHhcCCC-eEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIP-FVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~-vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
++.|+|.|.+|..+++.|...|++ +.++|+++++.+.+.+. |..+ +.| . .+ -++++|.|+++++++.. .
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~---~---~~-~~~~~Dvvi~av~~~~~-~ 82 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-TTD---L---AE-VNPYAKLYIVSLKDSAF-A 82 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-ESC---G---GG-SCSCCSEEEECCCHHHH-H
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-eCC---H---HH-HhcCCCEEEEecCHHHH-H
Confidence 688999999999999999999999 89999999998877654 6543 222 1 11 24689999999988743 3
Q ss_pred HHHHHHHHhC-CCceEEEeeC
Q 000968 1089 RTVWALSKYF-PNVKTFVRAH 1108 (1207)
Q Consensus 1089 ~i~l~aR~l~-P~i~IIaRa~ 1108 (1207)
.++..+.... |+ .+++...
T Consensus 83 ~v~~~l~~~~~~~-~ivv~~s 102 (266)
T 3d1l_A 83 ELLQGIVEGKREE-ALMVHTA 102 (266)
T ss_dssp HHHHHHHTTCCTT-CEEEECC
T ss_pred HHHHHHHhhcCCC-cEEEECC
Confidence 3433444333 44 4555443
No 74
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.97 E-value=0.14 Score=57.80 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=64.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhhhhCCCC-EEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~r~~g~~-vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.++.|+|.|.+|..+++.|.+.|+ +|+++|++++..+.+.+.|.. ....|. .+.-+.+||.||++++.+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~------~~~~~~~aDvVilavp~~~~ 107 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI------AKVEDFSPDFVMLSSPVRTF 107 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT------TGGGGGCCSEEEECSCGGGH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH------HHHhhccCCEEEEeCCHHHH
Confidence 578999999999999999999999 899999999999888877753 122221 11025789999999987643
Q ss_pred hHHHHHHHHH-hCCCceEEEeeC
Q 000968 1087 NYRTVWALSK-YFPNVKTFVRAH 1108 (1207)
Q Consensus 1087 Ni~i~l~aR~-l~P~i~IIaRa~ 1108 (1207)
. .++..+.. +.|+ .+++-+.
T Consensus 108 ~-~vl~~l~~~l~~~-~iv~d~~ 128 (314)
T 3ggo_A 108 R-EIAKKLSYILSED-ATVTDQG 128 (314)
T ss_dssp H-HHHHHHHHHSCTT-CEEEECC
T ss_pred H-HHHHHHhhccCCC-cEEEECC
Confidence 3 33333433 4555 3554433
No 75
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.90 E-value=0.061 Score=56.23 Aligned_cols=71 Identities=23% Similarity=0.248 Sum_probs=59.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.| .|.+|+.+++.|.+.|++|++++++++..+... .++.++.||.+|++.+.++ ++.+|.||-+...
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEV-CKGADAVISAFNP 77 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHH-HTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHH-hcCCCEEEEeCcC
Confidence 588888 599999999999999999999999988754332 5788999999999998876 4578998887654
No 76
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.67 E-value=0.11 Score=56.70 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=60.5
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhhhhCCCCE-EEecCCCHHHHHhcCcc-ccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPV-YFGDAGSREVLHKVGAE-RACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~r~~g~~v-i~GDatd~evL~~AgI~-~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..+++.|...|+ +++++|+++++.+.++..|... .. ++.+ .-+. ++|.|+++++....
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~---~~~~----~~~~~~aDvVilavp~~~~ 75 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT---TSIA----KVEDFSPDFVMLSSPVRTF 75 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE---SCGG----GGGGTCCSEEEECSCHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc---CCHH----HHhcCCCCEEEEcCCHHHH
Confidence 47899999999999999999998 8999999999988887777531 22 1221 1235 89999999987633
Q ss_pred hHHHHHHHHH-hCCCceEEEe
Q 000968 1087 NYRTVWALSK-YFPNVKTFVR 1106 (1207)
Q Consensus 1087 Ni~i~l~aR~-l~P~i~IIaR 1106 (1207)
. .++..+.. +.|+. +++-
T Consensus 76 ~-~v~~~l~~~l~~~~-iv~~ 94 (281)
T 2g5c_A 76 R-EIAKKLSYILSEDA-TVTD 94 (281)
T ss_dssp H-HHHHHHHHHSCTTC-EEEE
T ss_pred H-HHHHHHHhhCCCCc-EEEE
Confidence 2 33333333 44554 4443
No 77
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.63 E-value=0.073 Score=56.42 Aligned_cols=66 Identities=12% Similarity=-0.012 Sum_probs=53.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
.++.|+|.|.+|+.+++.|.+.|++++++|+++++.+.+.+.|..+. + +.++ +.++|.|+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-----~---~~~~-~~~~DvVi~av~~~ 94 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-----F---QEEA-VSSPEVIFVAVFRE 94 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-----E---HHHH-TTSCSEEEECSCGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-----c---HHHH-HhCCCEEEECCChH
Confidence 36889999999999999999999999999999999888776665542 1 2222 46899999999864
No 78
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.58 E-value=0.064 Score=61.67 Aligned_cols=98 Identities=19% Similarity=0.098 Sum_probs=68.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch--
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-- 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-- 1086 (1207)
.+++|+|.|.+|+.+++.+...|.+|+++|.++++.+.+.+ .|.. +.+|.++.+.+.++ +.++|.+|.++..+..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~-~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKS-VQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHH-HHHCSEEEECCC------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHH-HhCCCEEEECCCCCcccc
Confidence 57999999999999999999999999999999998877654 4554 56777777776654 5689999998876531
Q ss_pred -hHHHHHHHHHhCCCceEEEeeCC
Q 000968 1087 -NYRTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1087 -Ni~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
.+.....++.+.|...++-...+
T Consensus 245 ~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEECC--
T ss_pred chhHHHHHHHhhcCCCEEEEEecC
Confidence 11122334455566555554443
No 79
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=93.56 E-value=0.18 Score=56.46 Aligned_cols=108 Identities=14% Similarity=0.040 Sum_probs=74.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
+|=+||.|.+|..+++.|.+.|+++++.|+++++++.+.+.|..+ +.++.-+ ++.+|.|+++++++..-..+
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~----a~s~~e~----~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEECCSCHHHHHHH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEE----cCCHHHH----HhcCCceeecCCchHHHHHH
Confidence 467899999999999999999999999999999999998887533 2333322 36789999999988655444
Q ss_pred HHHH----HHhCCCceEEEeeC--ChH----HHHHHHhCCCCeeecC
Q 000968 1091 VWAL----SKYFPNVKTFVRAH--DID----HGLNLEKAGATAVVPE 1127 (1207)
Q Consensus 1091 ~l~a----R~l~P~i~IIaRa~--d~~----~~~~L~~aGAd~VI~p 1127 (1207)
.... ....|. ++++-.. +++ ....+++.|+.++=-|
T Consensus 77 ~~~~~g~~~~~~~g-~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 77 YLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp HHSSSSSTTSCCC--CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred HhchhhhhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 4321 222333 3444433 343 4455567788876544
No 80
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.54 E-value=0.89 Score=65.06 Aligned_cols=62 Identities=10% Similarity=0.103 Sum_probs=39.0
Q ss_pred CcchhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000968 263 GKEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEE 324 (1207)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~~a~~a~~ 324 (1207)
..+-++.+..|+++..++|+.|++.|++|..+|.+-+++.+|..+|.+.++..+..=..|+.
T Consensus 2016 l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~ 2077 (3245)
T 3vkg_A 2016 VEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIA 2077 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777777777777777777777777776666666666666655555544444443
No 81
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.53 E-value=0.17 Score=54.76 Aligned_cols=66 Identities=20% Similarity=0.203 Sum_probs=50.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecC--ChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDV--RSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~--D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++-|+|.|.+|..++..|.+.|+++++.|+ +++..+.+...|.. .+..+.+ .++|.|+++++++..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~-----~~aDvvi~~v~~~~~ 69 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-----ETSEEDV-----YSCPVVISAVTPGVA 69 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-----ECCHHHH-----HTSSEEEECSCGGGH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-----CCHHHHH-----hcCCEEEEECCCHHH
Confidence 367899999999999999999999999988 77777777666653 1222332 468999999987643
No 82
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.52 E-value=0.37 Score=57.77 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=72.8
Q ss_pred cccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CC--CCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LD--LPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1007 ~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g--~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
.+...+-|+|.|.+|..++..|.+.|++|++.|+++++++.+.+ .. ..+. . ..+++-+- .+++++|.|++++++
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~-~-~~s~~e~v-~~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSII-G-ATSIEDFI-SKLKRPRKVMLLVKA 84 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEE-C-CSSHHHHH-HTSCSSCEEEECCCS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeE-E-eCCHHHHH-hcCCCCCEEEEEcCC
Confidence 45567899999999999999999999999999999999988765 21 1121 1 22332221 134569999999988
Q ss_pred cchhHHHHHHHHHh-CCCceEEEeeCC--hH----HHHHHHhCCCCee
Q 000968 1084 PGANYRTVWALSKY-FPNVKTFVRAHD--ID----HGLNLEKAGATAV 1124 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l-~P~i~IIaRa~d--~~----~~~~L~~aGAd~V 1124 (1207)
+.....++..+... .|+ .+|+-..+ +. -...+.+.|+..+
T Consensus 85 ~~~v~~vl~~l~~~l~~g-~iIId~s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKG-DIIIDGGNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp SHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHHhCCCC-CEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence 64444444444433 344 45554433 22 2233455676654
No 83
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.51 E-value=0.48 Score=53.03 Aligned_cols=130 Identities=18% Similarity=0.121 Sum_probs=82.8
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh-hh--CCC-----CEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG-RA--LDL-----PVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~-r~--~g~-----~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
++.|+|.|.+|..++..|...|. +++++|.|+++.+.. .. ... .-+.. .+. ..+..||.||++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-----~a~~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-----SELADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-----GGGTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-----HHhCCCCEEEEc
Confidence 47899999999999999999998 999999999866432 11 111 11222 121 247899999999
Q ss_pred cCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCCCeeecC-CcHHHHHHHHHHHH
Q 000968 1081 LDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGATAVVPE-TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1081 tddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGAd~VI~p-~~eaal~La~~iL~ 1141 (1207)
++.+. .|. .++..+.++.|+..++. +.++.+. ..+ +....++|+-- +..-..++...+-+
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~-~tNP~~~~~~~~~~~~~~~rviG~gt~Ld~~r~~~~la~ 153 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV-TSNPVDLLTDLATQLAPGQPVIGSGTVLDSARFRHLMAQ 153 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHCSSSEEEE-CSSSHHHHHHHHHHHSCSSCEEECTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE-ecCchHHHHHHHHHhCChhcEEeCCcCchHHHHHHHHHH
Confidence 86553 343 34456667789887666 4555433 223 33466777744 55555666667766
Q ss_pred HcCCCHH
Q 000968 1142 QAKLPAS 1148 (1207)
Q Consensus 1142 ~lg~~~~ 1148 (1207)
.+++++.
T Consensus 154 ~l~v~~~ 160 (304)
T 2v6b_A 154 HAGVDGT 160 (304)
T ss_dssp HHTSCGG
T ss_pred HhCcCHH
Confidence 6666553
No 84
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.45 E-value=0.13 Score=56.53 Aligned_cols=69 Identities=23% Similarity=0.202 Sum_probs=52.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|.|.+|..+++.|.+.|++++++|+++++.+.+.+.|..+. .+.+-+ +.++|.|+++++++...
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~~~~~----~~~~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV----SSPADV----AEKADRIITMLPTSINA 70 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC----SSHHHH----HHHCSEEEECCSSHHHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec----CCHHHH----HhcCCEEEEeCCCHHHH
Confidence 4678999999999999999999999999999999988877665431 222211 24578888888665433
No 85
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.42 E-value=0.16 Score=57.18 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=61.9
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec-----------CCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD-----------AGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD-----------atd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|.+.|.+|+++|+++++.+.+++.+...+.|. .++.+-. +..+|.|++
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vi~ 81 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA----VKDADVILI 81 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH----HTTCSEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH----HhcCCEEEE
Confidence 6889999999999999999999999999999999888766521222222 1232211 357899999
Q ss_pred ecCCcchhHHHHHHHHH-hCCCceEEEe
Q 000968 1080 TLDTPGANYRTVWALSK-YFPNVKTFVR 1106 (1207)
Q Consensus 1080 atddd~~Ni~i~l~aR~-l~P~i~IIaR 1106 (1207)
+++.+.. ..++..++. +.|+..++..
T Consensus 82 ~v~~~~~-~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVPAIHH-ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSCGGGH-HHHHHHHGGGCCTTCEEEES
T ss_pred eCCchHH-HHHHHHHHHhCCCCCEEEEc
Confidence 9988754 333333433 3455444444
No 86
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.42 E-value=0.088 Score=61.23 Aligned_cols=113 Identities=12% Similarity=-0.009 Sum_probs=80.4
Q ss_pred ccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCC-CEEEecCCCHHHHHhcC----ccccCEEEEecC
Q 000968 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL-PVYFGDAGSREVLHKVG----AERACAAAITLD 1082 (1207)
Q Consensus 1008 lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~-~vi~GDatd~evL~~Ag----I~~A~~VViatd 1082 (1207)
...+++|+|.|.+++.+++.+...|+.|+++|..++.....+-.+. .++.+++ .+.+.... ++.-.++|+.|.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~~~~fp~a~~~~~~~p--~~~~~~~~~~~~~~~~t~vvvlTh 280 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTARFPTADEVVVDWP--HRYLAAQAEAGAIDARTVVCVLTH 280 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSCTTTCSSSSEEEESCH--HHHHHHHHHHTCCCTTCEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcccccCCCceEEEeCCh--HHHHHhhccccCCCCCcEEEEEEC
Confidence 4568999999999999999999999999999999875433332343 4566655 56666656 788889999999
Q ss_pred CcchhHHHHHHHHHhCCCceEEEeeCChHH---HHHHHhCCCC
Q 000968 1083 TPGANYRTVWALSKYFPNVKTFVRAHDIDH---GLNLEKAGAT 1122 (1207)
Q Consensus 1083 dd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~---~~~L~~aGAd 1122 (1207)
|+.....+...+-+...-.+|=+.-....+ .++|++.|.+
T Consensus 281 ~~~~D~~~L~~aL~~~~~~YIG~iGSrrk~~~~~~rL~~~G~~ 323 (386)
T 2we8_A 281 DPKFDVPLLEVALRLPDIAYIGAMGSRRTHEDRLARLREAGLT 323 (386)
T ss_dssp CHHHHHHHHHHHTTSSCCSEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred ChHhHHHHHHHHhcCCCCCEEEEecChhHHHHHHHHHHhCCCC
Confidence 987777777666555412466555544444 4445566754
No 87
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.35 E-value=0.072 Score=59.12 Aligned_cols=71 Identities=11% Similarity=0.070 Sum_probs=58.6
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
+++|.|. |.+|+.+++.|.+.|++|++++++++..+.+...++.++.||.+|++.+.++ ++.+|.||-+..
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~a~ 86 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA-LRGLDGVIFSAG 86 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH-TTTCSEEEEC--
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH-HcCCCEEEECCc
Confidence 5888884 9999999999999999999999988766555555889999999999998876 356888887653
No 88
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.23 E-value=0.11 Score=60.42 Aligned_cols=118 Identities=13% Similarity=0.059 Sum_probs=83.5
Q ss_pred cccccCCCchHHHHHHHHHhcCC---CeEeecCChHHHHhhhh-------CCCCEEEecCCCHHHHHhcCcc--ccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI---PFVALDVRSDRVAIGRA-------LDLPVYFGDAGSREVLHKVGAE--RACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi---~vvVID~D~e~ve~~r~-------~g~~vi~GDatd~evL~~AgI~--~A~~VV 1078 (1207)
+++|+|.|.+|+.+++.|.+.+. .+++.|+++++.+.+.+ .++..+..|.++.+.++++ ++ ++|.||
T Consensus 3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~-l~~~~~DvVi 81 (405)
T 4ina_A 3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL-INEVKPQIVL 81 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH-HHHHCCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH-HHhhCCCEEE
Confidence 57889999999999999999873 89999999998765532 1478889999998887765 33 389988
Q ss_pred EecCCcchhHHHHHHHHHhCCCceEEEeeC--C-----------hHHHHHHHhCCCCeeecCCcHHH
Q 000968 1079 ITLDTPGANYRTVWALSKYFPNVKTFVRAH--D-----------IDHGLNLEKAGATAVVPETLEPS 1132 (1207)
Q Consensus 1079 iatddd~~Ni~i~l~aR~l~P~i~IIaRa~--d-----------~~~~~~L~~aGAd~VI~p~~eaa 1132 (1207)
.+++.. .+..++..+.+.+.+ ++-.+. . ....+..+++|+..+....+..+
T Consensus 82 n~ag~~-~~~~v~~a~l~~g~~--vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG 145 (405)
T 4ina_A 82 NIALPY-QDLTIMEACLRTGVP--YLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPG 145 (405)
T ss_dssp ECSCGG-GHHHHHHHHHHHTCC--EEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTB
T ss_pred ECCCcc-cChHHHHHHHHhCCC--EEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCcc
Confidence 887654 345555555555533 332211 1 14566778889887776665444
No 89
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=93.22 E-value=0.1 Score=57.16 Aligned_cols=67 Identities=13% Similarity=0.008 Sum_probs=51.7
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..+++.|.+.|++++++| ++++.+.+.+.|..+ ..+.+-+ +.++|.|+++++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~vp~~~~ 71 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN----VETARQV----TEFADIIFIMVPDTPQ 71 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC----CSSHHHH----HHTCSEEEECCSSHHH
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc----cCCHHHH----HhcCCEEEEECCCHHH
Confidence 58899999999999999999999999999 998888777666432 1222221 2468999999987653
No 90
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.20 E-value=0.16 Score=56.46 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=55.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCH-HHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSR-EVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~-evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
.++.|+|.|.+|..++..|...|.+++++|+++++.+.+.+.|..+ ..+. +. +.++|.|+++++++....
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~-----~~~~DvVi~av~~~~~~~ 101 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRTPAEV-----VSTCDITFACVSDPKAAK 101 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSCHHHH-----HHHCSEEEECCSSHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCCHHHH-----HhcCCEEEEeCCCHHHHH
Confidence 4689999999999999999999999999999999988777766532 1222 22 246899999998764443
Q ss_pred HH
Q 000968 1089 RT 1090 (1207)
Q Consensus 1089 ~i 1090 (1207)
.+
T Consensus 102 ~v 103 (316)
T 2uyy_A 102 DL 103 (316)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 91
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.11 E-value=0.082 Score=59.16 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=73.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCC-HHHHH--hcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLH--KVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd-~evL~--~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|.|.+|..++..|. .|.+|+++++++++.+.+++.|+.+. .+... +.... ..-...+|.|++++.... .
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~~~~~D~vilavK~~~-~ 80 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLY-KGGEEFRADCSADTSINSDFDLLVVTVKQHQ-L 80 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEE-ETTEEEEECCEEESSCCSCCSEEEECCCGGG-H
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEe-cCCCeecccccccccccCCCCEEEEEeCHHH-H
Confidence 5889999999999999999 99999999999998888887776554 22110 00000 123568999999987643 2
Q ss_pred HHHHHHHHHhCCCceEEEeeCChHHHHHHHhC-CCCee
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDIDHGLNLEKA-GATAV 1124 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~a-GAd~V 1124 (1207)
..++..++...++. |+.-.+--...+.+.+. |.+.|
T Consensus 81 ~~~l~~l~~~~~~~-ivs~~nGi~~~e~l~~~~~~~~v 117 (307)
T 3ego_A 81 QSVFSSLERIGKTN-ILFLQNGMGHIHDLKDWHVGHSI 117 (307)
T ss_dssp HHHHHHTTSSCCCE-EEECCSSSHHHHHHHTCCCSCEE
T ss_pred HHHHHHhhcCCCCe-EEEecCCccHHHHHHHhCCCCcE
Confidence 23333444444554 66666666666677765 55444
No 92
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.08 E-value=0.18 Score=56.72 Aligned_cols=68 Identities=25% Similarity=0.203 Sum_probs=52.4
Q ss_pred ccccccCCCchHHHHHHHHHhcC-CCeEeecCCh-------HHHHhhhhCCCCEEEe-cCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERL-IPFVALDVRS-------DRVAIGRALDLPVYFG-DAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~g-i~vvVID~D~-------e~ve~~r~~g~~vi~G-Datd~evL~~AgI~~A~~VVia 1080 (1207)
.++-|+|.|.+|..++..|.+.| ++|++.|+++ +..+.+...|. .. + ..+ -++++|.|+++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s--~~e-----~~~~aDvVi~a 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EPLD--DVA-----GIACADVVLSL 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEES--SGG-----GGGGCSEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCC--HHH-----HHhcCCEEEEe
Confidence 46889999999999999999999 9999999998 56666666665 21 1 112 24678999999
Q ss_pred cCCcchh
Q 000968 1081 LDTPGAN 1087 (1207)
Q Consensus 1081 tddd~~N 1087 (1207)
++++...
T Consensus 95 vp~~~~~ 101 (317)
T 4ezb_A 95 VVGAATK 101 (317)
T ss_dssp CCGGGHH
T ss_pred cCCHHHH
Confidence 9887543
No 93
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.95 E-value=0.17 Score=59.45 Aligned_cols=71 Identities=24% Similarity=0.312 Sum_probs=53.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEE-------------e---cCCCHHHHHhcCcccc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF-------------G---DAGSREVLHKVGAERA 1074 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~-------------G---Datd~evL~~AgI~~A 1074 (1207)
++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+++.+.+++. | ..++.+- -+..|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~----~~~~a 77 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKK----AVLDS 77 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH----HHHTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHH----HhccC
Confidence 46789999999999999999999999999999999988765443321 0 0112210 13578
Q ss_pred CEEEEecCCcc
Q 000968 1075 CAAAITLDTPG 1085 (1207)
Q Consensus 1075 ~~VViatddd~ 1085 (1207)
|.++++++.+.
T Consensus 78 DvviiaVptp~ 88 (436)
T 1mv8_A 78 DVSFICVGTPS 88 (436)
T ss_dssp SEEEECCCCCB
T ss_pred CEEEEEcCCCc
Confidence 99999998765
No 94
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=92.89 E-value=0.086 Score=62.28 Aligned_cols=85 Identities=18% Similarity=0.077 Sum_probs=59.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..++|+|||++|+.+++.|+..|..|++.|.||.+.......|+.++ +.+.+ +.+||.|+.++++. ++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-----~LeEl----L~~ADIVv~atgt~--~lI 316 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-----TLDDA----ASTADIVVTTTGNK--DVI 316 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-----CHHHH----GGGCSEEEECCSSS--SSB
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-----cHHHH----HhhCCEEEECCCCc--ccc
Confidence 46889999999999999999999999999999987666666676543 22211 35789988877543 222
Q ss_pred HHHHHHHhCCCceEEE
Q 000968 1090 TVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIa 1105 (1207)
.....+.+-|...++-
T Consensus 317 ~~e~l~~MK~GAILIN 332 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGN 332 (464)
T ss_dssp CHHHHHHSCTTEEEEE
T ss_pred CHHHHhcCCCCeEEEE
Confidence 2334455555544443
No 95
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.89 E-value=0.12 Score=56.80 Aligned_cols=66 Identities=12% Similarity=0.226 Sum_probs=53.0
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
++.|+|. |.+|..+++.|.+.|++++++|+++++.+.+...|+.+ ++. ..-+.++|.|+++++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-----~~~----~~~~~~aDvVi~av~~~~ 79 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-----TDG----DGWIDEADVVVLALPDNI 79 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-----CCS----SGGGGTCSEEEECSCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-----CCH----HHHhcCCCEEEEcCCchH
Confidence 6889999 99999999999999999999999999988877666432 121 112467899999998764
No 96
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.83 E-value=0.14 Score=61.35 Aligned_cols=88 Identities=11% Similarity=0.097 Sum_probs=64.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..++|+|+|.+|+.+++.++..|.+|+++|.++++.+.++..|..+ .+.+ ++ +..+|.|+.+++++..-
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-----~~l~---e~-l~~aDvVi~atgt~~~i-- 343 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-----VTVE---EA-IGDADIVVTATGNKDII-- 343 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CCHH---HH-GGGCSEEEECSSSSCSB--
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-----ecHH---HH-HhCCCEEEECCCCHHHH--
Confidence 4689999999999999999999999999999999988888888753 2222 22 46899999998766411
Q ss_pred HHHHHHHhCCCceEEEeeC
Q 000968 1090 TVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~ 1108 (1207)
....++.+.|...++--.+
T Consensus 344 ~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 344 MLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CHHHHHHSCTTCEEEECSS
T ss_pred HHHHHHhcCCCcEEEEeCC
Confidence 1234455666665554443
No 97
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=92.78 E-value=0.094 Score=38.30 Aligned_cols=26 Identities=35% Similarity=0.574 Sum_probs=23.9
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHH
Q 000968 286 NCETELRRLQSKKEELQKEVDRLNEV 311 (1207)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~ 311 (1207)
..|+++|.||....+|||.+|||.+-
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999874
No 98
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.72 E-value=0.25 Score=56.99 Aligned_cols=110 Identities=12% Similarity=-0.030 Sum_probs=80.1
Q ss_pred ccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCC-EEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1008 lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~-vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
...+++|+|.|.+++.+++.+...|+.|+++|..++.....+-.+.. ++.+++ .+.+....++.-.++|+.|.|...
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~~~p--~~~~~~~~~~~~t~vvv~TH~h~~ 275 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIVDFP--ADFLRKFLIRPDDFVLIMTHHFQK 275 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEESCH--HHHHHHSCCCTTCEEEECCSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEecCCH--HHHHhhcCCCCCeEEEEEeCCchh
Confidence 45689999999999999999999999999999998876444333443 555554 667888889999999999998766
Q ss_pred hHHHHHHHHHhCCCceEEEeeCChHHHHHHHhCCC
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGA 1121 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d~~~~~~L~~aGA 1121 (1207)
-..+...+-+. |-.+| --.-++.-.++|.+.|.
T Consensus 276 D~~~L~~aL~~-~~~Yi-G~iGSr~R~~rl~~~g~ 308 (362)
T 3on5_A 276 DQEILHFLLEK-ELRYI-GILGSKERTRRLLQNRK 308 (362)
T ss_dssp HHHHHHHHSSS-CCSEE-EESSCHHHHHHHHTSCC
T ss_pred hHHHHHHHhcC-CCCEE-EEeCCHHHHHHHHhcCC
Confidence 66666555444 33344 44444445566766664
No 99
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.67 E-value=0.35 Score=53.37 Aligned_cols=86 Identities=12% Similarity=0.031 Sum_probs=60.5
Q ss_pred cccccCCCchHHHHHHHHHhcCC---CeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI---PFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi---~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..+++.|.+.|+ ++++.|+++++.+.+.+. |+.+. .+..+. +.++|.||++++.. .
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~---~~~~~~-----~~~aDvVilav~p~-~ 75 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT---QDNRQG-----ALNADVVVLAVKPH-Q 75 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE---SCHHHH-----HSSCSEEEECSCGG-G
T ss_pred EEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe---CChHHH-----HhcCCeEEEEeCHH-H
Confidence 58899999999999999999998 899999999999888765 65432 111222 35789999999653 3
Q ss_pred hHHHHHHHHH--hCCCceEEEe
Q 000968 1087 NYRTVWALSK--YFPNVKTFVR 1106 (1207)
Q Consensus 1087 Ni~i~l~aR~--l~P~i~IIaR 1106 (1207)
-..+...++. ..++ .+++.
T Consensus 76 ~~~vl~~l~~~~l~~~-~iiiS 96 (280)
T 3tri_A 76 IKMVCEELKDILSETK-ILVIS 96 (280)
T ss_dssp HHHHHHHHHHHHHTTT-CEEEE
T ss_pred HHHHHHHHHhhccCCC-eEEEE
Confidence 3334444544 3454 24443
No 100
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.51 E-value=0.33 Score=55.13 Aligned_cols=88 Identities=15% Similarity=0.062 Sum_probs=64.7
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHH--Hhhhh-CCCCEEEec-CCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV--AIGRA-LDLPVYFGD-AGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~v--e~~r~-~g~~vi~GD-atd~evL~~AgI~~A~~VViatddd 1084 (1207)
.+++|.| .|.+|+.+++.|.+.|++|++++++++.. +.+.. .++.++.|| .+|++.+.++ ++.+|.||......
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~-~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL-FEGAHLAFINTTSQ 84 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH-HTTCSEEEECCCST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHH-HhcCCEEEEcCCCC
Confidence 3578888 49999999999999999999999987654 33333 367889999 9999998876 56789988655432
Q ss_pred --chh---HHHHHHHHHhC
Q 000968 1085 --GAN---YRTVWALSKYF 1098 (1207)
Q Consensus 1085 --~~N---i~i~l~aR~l~ 1098 (1207)
..| ..++..+++..
T Consensus 85 ~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHHHcC
Confidence 233 23444555555
No 101
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.48 E-value=0.2 Score=53.93 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=50.6
Q ss_pred cccccCCCchHHHHHHHHHhcCC----CeEeecCChHHHHhhhh-CCCCEEEecCCCH-HHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI----PFVALDVRSDRVAIGRA-LDLPVYFGDAGSR-EVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi----~vvVID~D~e~ve~~r~-~g~~vi~GDatd~-evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+|.|.+|..+++.|.+.|+ ++++.|+++++.+.+.+ .|..+ ..+. +.+ +++|.|+++++..
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~-----~~aDvVilav~~~ 74 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVA-----KNADILILSIKPD 74 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHH-----HHCSEEEECSCTT
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHH-----HhCCEEEEEeCHH
Confidence 58899999999999999999998 99999999999888754 46542 2222 333 4588999998543
No 102
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.43 E-value=0.25 Score=58.91 Aligned_cols=73 Identities=22% Similarity=0.329 Sum_probs=54.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHh--------------cCccccC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK--------------VGAERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~--------------AgI~~A~ 1075 (1207)
-++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+++.+.+++. +.-.+.+.+ ..+..||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e--~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHE--PGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCC--TTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCC--CCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 368899999999999999999999999999999999988776544321 111112211 1245789
Q ss_pred EEEEecCCc
Q 000968 1076 AAAITLDTP 1084 (1207)
Q Consensus 1076 ~VViatddd 1084 (1207)
.++++++.+
T Consensus 87 vviiaVptp 95 (478)
T 2y0c_A 87 VQFIAVGTP 95 (478)
T ss_dssp EEEECCCCC
T ss_pred EEEEEeCCC
Confidence 999998875
No 103
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.36 E-value=0.27 Score=53.03 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=51.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+|.|.+|..+++.|.+.|.++.+.|+++++.+.+.+. |..+ ..+.+-+ +.++|.|++++++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~Vi~~v~~~ 71 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMSHQDL----IDQVDLVILGIKPQ 71 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHH----HHTCSEEEECSCGG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHH----HhcCCEEEEEeCcH
Confidence 58899999999999999999999999999999998877643 6542 2233222 23789999999843
No 104
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.25 E-value=0.24 Score=54.28 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=61.1
Q ss_pred cccccCCCchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCC-EEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~-vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|.|.+|..++..|... +.+++++|+++++.+.+.+.|.. ....|.. + -+.++|.|+++++.+..
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~--~-----~~~~aDvVilavp~~~~- 79 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFK--V-----FAALADVIILAVPIKKT- 79 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTT--T-----TGGGCSEEEECSCHHHH-
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHH--H-----hhcCCCEEEEcCCHHHH-
Confidence 588999999999999999987 67899999999998887766653 2222221 1 24689999999987644
Q ss_pred HHHHHHHHHh--CCCceEEEee
Q 000968 1088 YRTVWALSKY--FPNVKTFVRA 1107 (1207)
Q Consensus 1088 i~i~l~aR~l--~P~i~IIaRa 1107 (1207)
..++..++.. .|+ .+++-.
T Consensus 80 ~~v~~~l~~~~l~~~-~ivi~~ 100 (290)
T 3b1f_A 80 IDFIKILADLDLKED-VIITDA 100 (290)
T ss_dssp HHHHHHHHTSCCCTT-CEEECC
T ss_pred HHHHHHHHhcCCCCC-CEEEEC
Confidence 3344444443 344 344443
No 105
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.24 E-value=0.43 Score=56.96 Aligned_cols=93 Identities=11% Similarity=0.096 Sum_probs=62.9
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC----CCCEEEecCCCH-HHHHhcCccccCEEEEecCC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL----DLPVYFGDAGSR-EVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~----g~~vi~GDatd~-evL~~AgI~~A~~VViatdd 1083 (1207)
+.++-|+|.|.+|..++..|.+.|++|++.|+++++++.+.+. | +. . ..++ +.+. +++++|.|++++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~g--i~-~-~~s~~e~v~--~l~~aDvVil~Vp~ 88 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKK--LV-P-YYTVKEFVE--SLETPRRILLMVKA 88 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSC--EE-E-CSSHHHHHH--TBCSSCEEEECSCS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCC--eE-E-eCCHHHHHh--CCCCCCEEEEECCC
Confidence 3468899999999999999999999999999999998877643 3 21 1 2233 3332 33568999999988
Q ss_pred cchhHHHHHHHHHh-CCCceEEEeeC
Q 000968 1084 PGANYRTVWALSKY-FPNVKTFVRAH 1108 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l-~P~i~IIaRa~ 1108 (1207)
+.....++..+... .|+ .+|+-..
T Consensus 89 ~~~v~~vl~~l~~~l~~g-~iIId~s 113 (480)
T 2zyd_A 89 GAGTDAAIDSLKPYLDKG-DIIIDGG 113 (480)
T ss_dssp SSHHHHHHHHHGGGCCTT-CEEEECS
T ss_pred HHHHHHHHHHHHhhcCCC-CEEEECC
Confidence 64433343344333 344 3444333
No 106
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.16 E-value=0.23 Score=52.20 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=57.9
Q ss_pred cccccC-CCchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
+++|.| .|.+|+.+++.|.+. |.+|++++++++..+.+ ..++.++.+|.+|++.+.++ ++..|.||-+..
T Consensus 6 ~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a~ 78 (253)
T 1xq6_A 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPA-FQGIDALVILTS 78 (253)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHH-HTTCSEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHH-HcCCCEEEEecc
Confidence 577777 699999999999999 89999999998877655 45788999999999988776 356888887653
No 107
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.10 E-value=0.21 Score=56.73 Aligned_cols=67 Identities=18% Similarity=0.112 Sum_probs=51.9
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHH-HHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDR-VAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~-ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|+|.+|..+++.|...|.++++.|++++. .+.+...|+.+. +..+. +.+||.|++++++...
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~~e~-----~~~aDvVilavp~~~~ 85 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA----DVKTA-----VAAADVVMILTPDEFQ 85 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE----CHHHH-----HHTCSEEEECSCHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc----cHHHH-----HhcCCEEEEeCCcHHH
Confidence 5889999999999999999999999999998766 566667776432 11232 3478999999987643
No 108
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.08 E-value=0.11 Score=56.56 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=57.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEec
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViat 1081 (1207)
+++|.|.|.+|+.+++.|.+.|++|++++++++.. ..++.++.||.+|++.+.++--.++|.||-+.
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 68999999999999999999999999999987652 36789999999999988876434589988765
No 109
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.96 E-value=0.61 Score=52.27 Aligned_cols=128 Identities=17% Similarity=0.070 Sum_probs=77.4
Q ss_pred cccccCCCchHHHHHHHHHhc--CCCeEeecCChHHHHhhh---hCC-----CC-EEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGR---ALD-----LP-VYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r---~~g-----~~-vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|... +.+++++|.|+++++... ... .+ -+... ++. +. +..||.||+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~----~~-l~~aDvVii 75 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-NDY----AD-TANSDIVII 75 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-SCG----GG-GTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC-CCH----HH-HCCCCEEEE
Confidence 478999999999999999884 789999999998776432 111 11 12221 222 12 689999999
Q ss_pred ecCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHH-HHHHHh---CCCCeeecC-CcHHHHHHHHHH
Q 000968 1080 TLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK---AGATAVVPE-TLEPSLQLAAAV 1139 (1207)
Q Consensus 1080 atddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~-~~~L~~---aGAd~VI~p-~~eaal~La~~i 1139 (1207)
+++.+. .|. .++..+++..|+..+++-++-... ...+.+ .....|+-- +..-..++...+
T Consensus 76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~rviG~gt~ld~~r~~~~l 155 (310)
T 1guz_A 76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFI 155 (310)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHHHHHHCSCGGGEEEECHHHHHHHHHHHH
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHHHHhcCCChHHEEECCCchHHHHHHHHH
Confidence 996541 343 344556667898877775544433 223333 334466644 333334444444
Q ss_pred HHHcC
Q 000968 1140 LAQAK 1144 (1207)
Q Consensus 1140 L~~lg 1144 (1207)
-..++
T Consensus 156 a~~l~ 160 (310)
T 1guz_A 156 AMELG 160 (310)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 44443
No 110
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.91 E-value=0.43 Score=53.12 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=55.3
Q ss_pred cccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEec
Q 000968 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1009 k~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViat 1081 (1207)
..+++|.|. |-+|+.+++.|.+.|+.|++++++++. .++.++.||.++++.+.++ +..+|.||-+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~A 85 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDA-IMGVSAVLHLG 85 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHH-HTTCSEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHH-HhCCCEEEECC
Confidence 456888887 999999999999999999999998765 5789999999999998776 34788888654
No 111
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.85 E-value=0.8 Score=51.77 Aligned_cols=133 Identities=15% Similarity=0.083 Sum_probs=81.0
Q ss_pred cccccC-CCchHHHHHHHHHhcC--CCeEeecCChHHHH--hhhhCCCC-EEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERL--IPFVALDVRSDRVA--IGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~g--i~vvVID~D~e~ve--~~r~~g~~-vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+| .|.+|..++..|...+ ..++++|.+++... .+.....+ -+.+ -.....+.++ +..||.||++.+.+
T Consensus 10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~a-l~gaDvVi~~ag~~ 87 (326)
T 1smk_A 10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAA-LTGMDLIIVPAGVP 87 (326)
T ss_dssp EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHH-HTTCSEEEECCCCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHH-cCCCCEEEEcCCcC
Confidence 689999 7999999999998888 68999998876222 22222222 2333 1122233322 46899999988643
Q ss_pred -----------chhH----HHHHHHHHhCCCceEEEeeCChHHH------HHHHh---CCCCeeecCCcHHHHHHHHHHH
Q 000968 1085 -----------GANY----RTVWALSKYFPNVKTFVRAHDIDHG------LNLEK---AGATAVVPETLEPSLQLAAAVL 1140 (1207)
Q Consensus 1085 -----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~------~~L~~---aGAd~VI~p~~eaal~La~~iL 1140 (1207)
..|. .++..+++.+|+..++.- .++-.. ..+++ .....|+--+..-..++-..+-
T Consensus 88 ~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~-SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~la 166 (326)
T 1smk_A 88 RKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI-SNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVA 166 (326)
T ss_dssp CCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEC-CSSHHHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE-CCchHHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHHHH
Confidence 1332 355667788999777774 566544 22233 3346787556543445555555
Q ss_pred HHcCCC
Q 000968 1141 AQAKLP 1146 (1207)
Q Consensus 1141 ~~lg~~ 1146 (1207)
+.++++
T Consensus 167 ~~l~v~ 172 (326)
T 1smk_A 167 EVLGLD 172 (326)
T ss_dssp HHHTCC
T ss_pred HHhCcC
Confidence 544443
No 112
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=91.82 E-value=0.27 Score=61.46 Aligned_cols=116 Identities=15% Similarity=0.108 Sum_probs=79.8
Q ss_pred cccccccccccCCCch------HHHHHHHHHhcC------CCeEeecCChHHHHhhh---h-CCCCEEEecCCCHHHHHh
Q 000968 1005 TDDLQDHIILCGFGRV------GQIIAQLLSERL------IPFVALDVRSDRVAIGR---A-LDLPVYFGDAGSREVLHK 1068 (1207)
Q Consensus 1005 ~~~lk~hVIIiG~Grv------G~~Ia~~L~~~g------i~vvVID~D~e~ve~~r---~-~g~~vi~GDatd~evL~~ 1068 (1207)
...+++|+|||+.|.. =+....-|++.. .|+|++..++...+.+. . ..+-++.|++.+.+.|++
T Consensus 381 ~~~~~nhivvc~~~~~~~~~~gL~~fi~PLRa~~~~~~el~pIViL~~~~~~~~~w~~i~~Fp~Vy~~~GSpl~~~DL~r 460 (722)
T 4hpf_A 381 KYKFRNHIVACVFGDAHSAPMGLRNFVMPLRASNYTRKELKDIVFIGSLDYLQREWRFLWNFPQIYILPGCALYSGDLHA 460 (722)
T ss_dssp -CCCCSCEEEEECCCTTSCCCCSHHHHGGGGBTTSCGGGCCCEEEEECHHHHHHHGGGGTTCSSEEEEESCTTCHHHHHH
T ss_pred hccccCCEEEEeccCcccccccchhheeeccccccccccCCCEEEEeCCCCCHHHHHHHhcCCCEEEEECCcCCHHHHHh
Confidence 3467899999987642 234444455432 36666654433222222 1 245677899999999999
Q ss_pred cCccccCEEEEecCC----------cchhHHHHHHHHHh-------CCCceEEEeeCChHHHHHHHhCC
Q 000968 1069 VGAERACAAAITLDT----------PGANYRTVWALSKY-------FPNVKTFVRAHDIDHGLNLEKAG 1120 (1207)
Q Consensus 1069 AgI~~A~~VViatdd----------d~~Ni~i~l~aR~l-------~P~i~IIaRa~d~~~~~~L~~aG 1120 (1207)
+|+..|+.+|+.... |..++.+.+.++++ +|++++|+.-.++.+++-+....
T Consensus 461 agi~~a~~vVIl~~~~~~~~~~~~~D~~tI~~~~~I~~l~~~~~~~~~~i~iitEL~~~sN~~fl~~~~ 529 (722)
T 4hpf_A 461 ANIEQCSMCAVLSPPPQPSSNQTLVDTEAIMATLTIGSLQIDEKSNCRKVPILTELKNPSNIHFIEQLG 529 (722)
T ss_dssp TTGGGCSEEEEECCCCCC-----CCSHHHHHHHHHHHSCCC-------CCCEEEECSSGGGHHHHHHHH
T ss_pred cCcccccEEEEEcCCCCCcccchhhhHHHHHHHHHHHHHHhhhhccCCCCcEEEEecCcccchhhcccc
Confidence 999999999998622 34567778888877 57889999999999999886433
No 113
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.47 Score=50.23 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=52.2
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEe-ecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVA-LDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvV-ID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+|.|.+|..+++.|.+.|+++++ .|+++++.+.+.+ .|..... .+.+. +.++|.|+++++..
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~~~-----~~~aDvVilavp~~ 92 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VELKD-----ALQADVVILAVPYD 92 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCHHH-----HTTSSEEEEESCGG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChHHH-----HhcCCEEEEeCChH
Confidence 689999999999999999999999999 9999998877643 4655543 22332 36789999998754
No 114
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.78 E-value=0.17 Score=59.82 Aligned_cols=73 Identities=19% Similarity=0.311 Sum_probs=53.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHH--------------hcCccccCE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLH--------------KVGAERACA 1076 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~--------------~AgI~~A~~ 1076 (1207)
++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+.+...+ ++- +.-.+.+. +.-+.+||.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~-i~e-~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIP-IYE-PGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSC-CCS-TTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCc-ccC-CCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 57899999999999999999999999999999999888763222 211 11111111 001568999
Q ss_pred EEEecCCcc
Q 000968 1077 AAITLDTPG 1085 (1207)
Q Consensus 1077 VViatddd~ 1085 (1207)
++++++.+.
T Consensus 82 ViiaVptp~ 90 (450)
T 3gg2_A 82 IFIAVGTPA 90 (450)
T ss_dssp EEECCCCCB
T ss_pred EEEEcCCCc
Confidence 999998773
No 115
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.74 E-value=0.17 Score=55.86 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=65.2
Q ss_pred cccccCCCchHHHHHHHHHhc-----C-CCeEeecCChHHHHhhhh-CCCCEEE--ec-------C-CCHHHHHhcCccc
Q 000968 1011 HIILCGFGRVGQIIAQLLSER-----L-IPFVALDVRSDRVAIGRA-LDLPVYF--GD-------A-GSREVLHKVGAER 1073 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~-----g-i~vvVID~D~e~ve~~r~-~g~~vi~--GD-------a-td~evL~~AgI~~ 1073 (1207)
++.|+|.|.+|..++..|.+. | .+|+++++ +++.+.+++ .|+.+.. |+ + ++.+. +..
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 83 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAE-----VGT 83 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHH-----HCC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccc-----cCC
Confidence 588999999999999999998 8 99999999 888888877 7765442 21 0 23322 368
Q ss_pred cCEEEEecCCcchhHHHHHHHHHh-CCCceEEEeeCChHHHHHH
Q 000968 1074 ACAAAITLDTPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNL 1116 (1207)
Q Consensus 1074 A~~VViatddd~~Ni~i~l~aR~l-~P~i~IIaRa~d~~~~~~L 1116 (1207)
+|.|++++..... ..++..++.. .|+..|+.-.+.....+.+
T Consensus 84 ~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l 126 (317)
T 2qyt_A 84 VDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADIAERM 126 (317)
T ss_dssp EEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSHHHHH
T ss_pred CCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCcHHHH
Confidence 9999999988754 2333333332 3343334334444443444
No 116
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.66 E-value=0.5 Score=54.93 Aligned_cols=100 Identities=15% Similarity=0.042 Sum_probs=66.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEE--------------ecCCCH-HHHHhcCccccC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF--------------GDAGSR-EVLHKVGAERAC 1075 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~--------------GDatd~-evL~~AgI~~A~ 1075 (1207)
++.|+|.|.+|..++..|.+ |++|+++|.|+++++.+++.+.++.- --.+++ +. +..+|
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~-----~~~aD 75 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA-----YKEAE 75 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH-----HHHCS
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH-----hcCCC
Confidence 46789999999999999998 99999999999999988777654310 001222 22 34689
Q ss_pred EEEEecCCcc----------hhHHHHHHHHHhCCCceEEE-eeCChHHHHHH
Q 000968 1076 AAAITLDTPG----------ANYRTVWALSKYFPNVKTFV-RAHDIDHGLNL 1116 (1207)
Q Consensus 1076 ~VViatddd~----------~Ni~i~l~aR~l~P~i~IIa-Ra~d~~~~~~L 1116 (1207)
.++++++.+. ....++..+..+.|+.-++. .+......+.+
T Consensus 76 vviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l 127 (402)
T 1dlj_A 76 LVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEM 127 (402)
T ss_dssp EEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHH
T ss_pred EEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHH
Confidence 9999998873 23333333433666644443 34445444444
No 117
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.63 E-value=0.3 Score=54.64 Aligned_cols=67 Identities=18% Similarity=0.145 Sum_probs=51.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCC--hHHHHhhhhCCCCEEEecCCCH-HHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVR--SDRVAIGRALDLPVYFGDAGSR-EVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D--~e~ve~~r~~g~~vi~GDatd~-evL~~AgI~~A~~VViatddd~ 1085 (1207)
.++-|+|.|.+|..+++.|.+.|+ ++++.|++ ++..+.+.+.|..+ ..++ +.+ .++|.|+++++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~-----~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVA-----GECDVIFSLVTAQA 95 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHH-----HHCSEEEECSCTTT
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHH-----hcCCEEEEecCchh
Confidence 368899999999999999999999 99999997 57777777777543 1222 222 45788888887764
No 118
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.60 E-value=1.1 Score=50.98 Aligned_cols=129 Identities=16% Similarity=0.062 Sum_probs=80.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHh----hhh------CCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRA------LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~----~r~------~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
.++.|+|.|.+|..++..|...+. +++++|.++++++- +.. .+..+..+| ...+..||.|
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------~~a~~~aDvV 77 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------YEDCKDADIV 77 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------HHHhCCCCEE
Confidence 468999999999999999998887 89999999987653 222 133344343 1346889999
Q ss_pred EEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHHH--HHHH-hCC--CCeeecC-CcHHHHHHH
Q 000968 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNLE-KAG--ATAVVPE-TLEPSLQLA 1136 (1207)
Q Consensus 1078 Viatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L~-~aG--Ad~VI~p-~~eaal~La 1136 (1207)
|++.+.+ ..|. .++..+++..|+..+++-+ ++-+. ..+. ..| ...|+-- +..=+.++-
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt-NPvd~~t~~~~k~~g~p~~rviG~gt~LD~~R~~ 156 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT-NPVDILTYATWKFSGLPKERVIGSGTTLDSARFR 156 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS-SSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC-ChHHHHHHHHHHhcCCCHHHEEeeccccHHHHHH
Confidence 9988654 2353 3445677888998665555 55432 2222 224 2456643 333234444
Q ss_pred HHHHHHcCCCH
Q 000968 1137 AAVLAQAKLPA 1147 (1207)
Q Consensus 1137 ~~iL~~lg~~~ 1147 (1207)
..+-+.+++++
T Consensus 157 ~~la~~lgv~~ 167 (326)
T 3pqe_A 157 FMLSEYFGAAP 167 (326)
T ss_dssp HHHHHHHTCCG
T ss_pred HHHHHHhCCCH
Confidence 44444455443
No 119
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.56 E-value=0.48 Score=51.97 Aligned_cols=68 Identities=18% Similarity=0.054 Sum_probs=54.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.+++|.| .|.+|+.+++.|.+.|++|+++++++...+ +. ++.++.||.+ ++.+.++ ++++|.||-+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~~~~~~-~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-LEDLINQ-LNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEcccc-HHHHHHh-hcCCCEEEEccc
Confidence 3678888 699999999999999999999999865544 32 8899999999 8888876 458999887664
No 120
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.46 E-value=0.61 Score=55.59 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=61.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----CCCCEEEecCCCHH-HHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSRE-VLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----~g~~vi~GDatd~e-vL~~AgI~~A~~VViatddd 1084 (1207)
++-|+|.|.+|..++..|.+.|++|+++|+++++++.+.+ .|+.. ..+.+ .+.. ++++|.|+++++++
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~----~~~~~e~v~~--l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG----AHSLEEMVSK--LKKPRRIILLVKAG 77 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE----CSSHHHHHHH--BCSSCEEEECSCTT
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEE----eCCHHHHHhh--ccCCCEEEEeCCCh
Confidence 5789999999999999999999999999999999988765 33221 22332 2221 35789999999886
Q ss_pred chhHHHHHHHHH-hCCCceEEEee
Q 000968 1085 GANYRTVWALSK-YFPNVKTFVRA 1107 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~-l~P~i~IIaRa 1107 (1207)
.....++..+.. +.|+ .+|+-.
T Consensus 78 ~~v~~vl~~l~~~l~~g-~iII~~ 100 (482)
T 2pgd_A 78 QAVDNFIEKLVPLLDIG-DIIIDG 100 (482)
T ss_dssp HHHHHHHHHHHHHCCTT-CEEEEC
T ss_pred HHHHHHHHHHHhhcCCC-CEEEEC
Confidence 433333333333 3444 344433
No 121
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.44 E-value=0.57 Score=52.24 Aligned_cols=99 Identities=17% Similarity=0.106 Sum_probs=66.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEE--ecC--------CCHHHHHhcCccccCEEEEe
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF--GDA--------GSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~--GDa--------td~evL~~AgI~~A~~VVia 1080 (1207)
++.|+|.|.+|..++..|.+.|.+|+++++++ .+.+++.|+.+.. |+. ++++ . +..+|.|+++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~---~--~~~~D~vila 76 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPE---E--IGPMDLVLVG 76 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHH---H--HCCCSEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHH---H--cCCCCEEEEe
Confidence 58899999999999999999999999999986 3667777755443 221 2332 2 3579999999
Q ss_pred cCCcchhHHHHHHHHH-hCCCceEEEeeCChHHHHHHH
Q 000968 1081 LDTPGANYRTVWALSK-YFPNVKTFVRAHDIDHGLNLE 1117 (1207)
Q Consensus 1081 tddd~~Ni~i~l~aR~-l~P~i~IIaRa~d~~~~~~L~ 1117 (1207)
+...... .++..++. ..|+..|+.-.+--+..+.+.
T Consensus 77 vk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~ 113 (312)
T 3hn2_A 77 LKTFANS-RYEELIRPLVEEGTQILTLQNGLGNEEALA 113 (312)
T ss_dssp CCGGGGG-GHHHHHGGGCCTTCEEEECCSSSSHHHHHH
T ss_pred cCCCCcH-HHHHHHHhhcCCCCEEEEecCCCCcHHHHH
Confidence 8765433 33334443 445655555555554444443
No 122
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=91.41 E-value=0.49 Score=62.50 Aligned_cols=18 Identities=17% Similarity=0.069 Sum_probs=8.2
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 000968 150 TDELRELLMNAMKELEVA 167 (1207)
Q Consensus 150 ~~~l~~~l~~a~~~~e~a 167 (1207)
+++|++-|.+.+.+|+..
T Consensus 859 l~~L~~eL~el~~~L~~l 876 (1184)
T 1i84_S 859 MQAKDEELQRTKERQQKA 876 (1184)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 123
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.35 E-value=0.18 Score=59.37 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=49.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
..+.|+|+|.+|+.+++.|+..|..|++.|.++.+...+...|+.+. + |+++ +.+||.|+.++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~-----s---L~ea-l~~ADVVilt~gt 276 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL-----L---VEDV-VEEAHIFVTTTGN 276 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----C---HHHH-TTTCSEEEECSSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec-----C---HHHH-HhhCCEEEECCCC
Confidence 36899999999999999999999999999999988766666665432 2 2221 3468888776544
No 124
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.35 E-value=0.34 Score=54.30 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=70.9
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec---------CCCHHHHHhcCccccCEEEE
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD---------AGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD---------atd~evL~~AgI~~A~~VVi 1079 (1207)
..++.|+|.|.+|..++..|.+.|.+|+++ .++++++.+++.|..+...+ .++. +. +..+|.||+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~---~~--~~~~D~vil 92 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP---SA--VQGADLVLF 92 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG---GG--GTTCSEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH---HH--cCCCCEEEE
Confidence 457899999999999999999999999999 99999988877665443111 1222 22 368999999
Q ss_pred ecCCcchhHHHHHHHHHh-CCCceEEEeeCChHHHHHHH-hCCCCeee
Q 000968 1080 TLDTPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNLE-KAGATAVV 1125 (1207)
Q Consensus 1080 atddd~~Ni~i~l~aR~l-~P~i~IIaRa~d~~~~~~L~-~aGAd~VI 1125 (1207)
++.... ...++..++.. .|+..++.-.+--+..+.+. ..| ..|+
T Consensus 93 avk~~~-~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 93 CVKSTD-TQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVA 138 (318)
T ss_dssp CCCGGG-HHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEE
T ss_pred Eccccc-HHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEE
Confidence 998863 33344444433 45544555555444434443 344 4443
No 125
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.31 E-value=0.19 Score=54.11 Aligned_cols=63 Identities=6% Similarity=-0.010 Sum_probs=49.2
Q ss_pred cccccCCCchHHHHHHHHHhcC-CCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g-i~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
++.|+|.|.+|..++..|.+.| .+++++|+++++.+.+.+. |..+ ..|.. + -+ ++|.|+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~-~~~~~------~-~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP------E-LH-SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC------C-CC-TTSEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEE-eCCHH------H-Hh-cCCEEEEEeC
Confidence 4779999999999999999999 9999999999998877654 6543 33321 1 23 6788888887
No 126
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.31 E-value=0.28 Score=58.39 Aligned_cols=112 Identities=14% Similarity=0.027 Sum_probs=76.9
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.+++|+|.|.+|+.+++.|.+. +.+++++++++++.+.+.. .+..++..|..+.+.+.++ +.++|.||.+++....
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~-l~~~DvVIn~tp~~~~- 101 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKV-LADNDVVISLIPYTFH- 101 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHH-HHTSSEEEECSCGGGH-
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHH-HcCCCEEEECCchhhh-
Confidence 4689999999999999999988 7899999999998876643 3677788999998777654 4589999999886532
Q ss_pred HHHHHHHHHhCCCceEEEeeC-Ch---HHHHHHHhCCCCeee
Q 000968 1088 YRTVWALSKYFPNVKTFVRAH-DI---DHGLNLEKAGATAVV 1125 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~-d~---~~~~~L~~aGAd~VI 1125 (1207)
..+...+-+. ...++.... .+ ...+..+++|+..+.
T Consensus 102 ~~v~~a~l~~--g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 102 PNVVKSAIRT--KTDVVTSSYISPALRELEPEIVKAGITVMN 141 (467)
T ss_dssp HHHHHHHHHH--TCEEEECSCCCHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhc--CCEEEEeecCCHHHHHHHHHHHHcCCEEEe
Confidence 2223222222 233443333 22 233455677875443
No 127
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=91.29 E-value=0.16 Score=60.92 Aligned_cols=84 Identities=13% Similarity=0.028 Sum_probs=58.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+.|+|+|++|+.+++.|+..|.+|++.|+++.+.......|+.+ .+ |+++ +.++|.|++++... ++.
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-----~~---l~el-l~~aDiVi~~~~t~--~lI 346 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-----VT---MEYA-ADKADIFVTATGNY--HVI 346 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-----CC---HHHH-TTTCSEEEECSSSS--CSB
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-----CC---HHHH-HhcCCEEEECCCcc--ccc
Confidence 3688999999999999999999999999999998754444556543 12 3322 56899999987432 222
Q ss_pred HHHHHHHhCCCceEE
Q 000968 1090 TVWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i~l~aR~l~P~i~II 1104 (1207)
....++.+-|+..++
T Consensus 347 ~~~~l~~MK~gAilI 361 (494)
T 3d64_A 347 NHDHMKAMRHNAIVC 361 (494)
T ss_dssp CHHHHHHCCTTEEEE
T ss_pred CHHHHhhCCCCcEEE
Confidence 223455566665443
No 128
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.23 E-value=0.54 Score=52.81 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=58.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.+++++|++++. +.....|... .+.+.+ +.++|.|+++++....+..
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV~l~~p~~~~t~~ 212 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-----VDLETL----LKESDVVTIHVPLVESTYH 212 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-----CCHHHH----HHHCSEEEECCCCSTTTTT
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-----cCHHHH----HhhCCEEEEecCCChHHhh
Confidence 35889999999999999999999999999999876 4455566532 133222 2478999999887543222
Q ss_pred H--HHHHHHhCCCceEEE
Q 000968 1090 T--VWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~IIa 1105 (1207)
+ ......+-|+..+|-
T Consensus 213 li~~~~l~~mk~ga~lin 230 (307)
T 1wwk_A 213 LINEERLKLMKKTAILIN 230 (307)
T ss_dssp CBCHHHHHHSCTTCEEEE
T ss_pred hcCHHHHhcCCCCeEEEE
Confidence 1 223445566654443
No 129
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.22 E-value=0.61 Score=54.96 Aligned_cols=73 Identities=15% Similarity=0.327 Sum_probs=56.7
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHh----------cCccccCEEEEe
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK----------VGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~----------AgI~~A~~VVia 1080 (1207)
+.-|+|.|.+|..++..|.+.|++|+++|.|+++++.+.+...++ .++.-++.+++ ..+++|+.++++
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi--~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~ 90 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISI--EEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIA 90 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSS--CCTTHHHHHHHHHHTTCEEEESSCCCCSEEEEC
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCc--CCCCHHHHHHhhcccCceEEeCchhhCCEEEEE
Confidence 467999999999999999999999999999999999987654444 23333333332 125689999999
Q ss_pred cCCcc
Q 000968 1081 LDTPG 1085 (1207)
Q Consensus 1081 tddd~ 1085 (1207)
++++.
T Consensus 91 VpTp~ 95 (431)
T 3ojo_A 91 VPTPN 95 (431)
T ss_dssp CCCCB
T ss_pred eCCCc
Confidence 98875
No 130
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=91.21 E-value=2.7 Score=39.77 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=65.1
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
...++++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-. .+. .-...+..+|+.+|++++|+.
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~l 81 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKDGFNVIW-AKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVL 81 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGGTCEEEE-ESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCCEEEE-ECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEE
Confidence 34577777777654433 345666552 23345566666667788988876 443 346778888999999999887
Q ss_pred eCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1107 AHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+.. .+......++|++.++...+
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP~ 106 (142)
T 2qxy_A 82 SAYVDKDLIINSVKAGAVDYILKPF 106 (142)
T ss_dssp ESCCCHHHHHHHHHHTCSCEEESSC
T ss_pred ECCCCHHHHHHHHHCCcceeEeCCC
Confidence 765 45577788899998875443
No 131
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.19 E-value=0.55 Score=52.75 Aligned_cols=87 Identities=10% Similarity=0.054 Sum_probs=59.8
Q ss_pred cccccCCCchHHHHHHHHHhcC----CCeEeecCChH--HHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL----IPFVALDVRSD--RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g----i~vvVID~D~e--~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+|.|.+|..++..|.+.| .+++++|++++ +.+.++..|..+. .| ..+. +..+|.||+++.+
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-~~--~~e~-----~~~aDvVilav~~- 94 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-PH--NKET-----VQHSDVLFLAVKP- 94 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-SC--HHHH-----HHHCSEEEECSCG-
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-CC--hHHH-----hccCCEEEEEeCH-
Confidence 5889999999999999999998 78999999986 7777776675432 21 2222 2468999999984
Q ss_pred chhHHHHHHHHHh-CCCceEEEee
Q 000968 1085 GANYRTVWALSKY-FPNVKTFVRA 1107 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l-~P~i~IIaRa 1107 (1207)
.....++..++.. .|+ .+|+-.
T Consensus 95 ~~~~~vl~~l~~~l~~~-~ivvs~ 117 (322)
T 2izz_A 95 HIIPFILDEIGADIEDR-HIVVSC 117 (322)
T ss_dssp GGHHHHHHHHGGGCCTT-CEEEEC
T ss_pred HHHHHHHHHHHhhcCCC-CEEEEe
Confidence 3333344444433 344 355544
No 132
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.15 E-value=0.68 Score=55.05 Aligned_cols=93 Identities=10% Similarity=0.047 Sum_probs=61.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCC--CCEEEecCCCH-HHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD--LPVYFGDAGSR-EVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g--~~vi~GDatd~-evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.++-|+|.|.+|..++..|.+.|++|++.|+++++++.+.+.. ..+ .. ..+. +.+. +++++|.|+++++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi-~~-~~s~~e~v~--~l~~aDvVilavp~~~~ 81 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNL-VF-TKTLEEFVG--SLEKPRRIMLMVQAGAA 81 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCE-EE-CSSHHHHHH--TBCSSCEEEECCCTTHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCe-EE-eCCHHHHHh--hccCCCEEEEEccCchH
Confidence 3688999999999999999999999999999999988775431 012 12 2233 3333 33568999999988644
Q ss_pred hHHHHHHHHH-hCCCceEEEee
Q 000968 1087 NYRTVWALSK-YFPNVKTFVRA 1107 (1207)
Q Consensus 1087 Ni~i~l~aR~-l~P~i~IIaRa 1107 (1207)
...++..+.. +.|+ .+|+-.
T Consensus 82 v~~vl~~l~~~l~~g-~iiId~ 102 (474)
T 2iz1_A 82 TDATIKSLLPLLDIG-DILIDG 102 (474)
T ss_dssp HHHHHHHHGGGCCTT-CEEEEC
T ss_pred HHHHHHHHHhhCCCC-CEEEEC
Confidence 3333333333 3344 344433
No 133
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.09 E-value=0.095 Score=57.02 Aligned_cols=93 Identities=13% Similarity=0.031 Sum_probs=59.3
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCC---CCE-EEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD---LPV-YFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g---~~v-i~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+...+ ..+ ..-...+++.+ +.+|.|+++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDLLLVTLKAWQV 76 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSEEEECSCGGGH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCcccc-----CCCCEEEEEecHHhH
Confidence 478999999999999999999999999999987665443322 100 01112334433 468999999988753
Q ss_pred hHHHHHHHHH-hCCCceEEEeeCC
Q 000968 1087 NYRTVWALSK-YFPNVKTFVRAHD 1109 (1207)
Q Consensus 1087 Ni~i~l~aR~-l~P~i~IIaRa~d 1109 (1207)
..++..++. ..|+..++--.+.
T Consensus 77 -~~v~~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 77 -SDAVKSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp -HHHHHHHHTTSCTTSCEEEECSS
T ss_pred -HHHHHHHHhhCCCCCEEEEecCC
Confidence 333333433 3445444444443
No 134
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=90.96 E-value=1.4 Score=41.16 Aligned_cols=96 Identities=8% Similarity=0.037 Sum_probs=61.7
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..++++|.|+...+.+ ...|+.++. -.+-.+.++...-.+.+.+++-..-+. .....+..+|+.+|++++|+-+
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t 86 (130)
T 3eod_A 8 KQILIVEDEQVFRSLLDSWFSSLGATTVL-AADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS 86 (130)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCceEEE-eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE
Confidence 4566677666544332 344665544 233455666666667888887665443 4467888899999999988877
Q ss_pred CCh--HHHHHHHhCCCCeeecCCc
Q 000968 1108 HDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
... +......++|++.++..-+
T Consensus 87 ~~~~~~~~~~~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 87 ATENMADIAKALRLGVEDVLLKPV 110 (130)
T ss_dssp CCCCHHHHHHHHHHCCSEEEESCC
T ss_pred cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 654 4557778899998885543
No 135
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=90.91 E-value=0.38 Score=54.69 Aligned_cols=72 Identities=18% Similarity=0.021 Sum_probs=58.5
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.+++|.|. |.+|+.+++.|.+.|++|+++++++.........++.++.||.+|++.+.++ ++.+|.||-+..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vih~A~ 102 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV-TEGVDHVFNLAA 102 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHH-HTTCSEEEECCC
T ss_pred CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHH-hCCCCEEEECce
Confidence 36888887 9999999999999999999999987654333445788999999999988765 367898887654
No 136
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.89 E-value=0.18 Score=59.41 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=49.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
..++|+|+|.+|+.+++.|+..|..|++.|.||.+...+...|+.+. + |++ -+..+|.++.++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~-----~---Lee-al~~ADIVi~atgt 285 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLV-----K---LNE-VIRQVDIVITCTGN 285 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----C---HHH-HTTTCSEEEECSSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEec-----c---HHH-HHhcCCEEEECCCC
Confidence 46899999999999999999999999999999987766666665432 1 222 23578888887543
No 137
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.78 E-value=0.24 Score=56.88 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=73.7
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
...+.|+|.|..|+.+++.+++.|+.++++|.+++.. ....-..++.+|..|.+.+.+. ++++|.++...++ .+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~-~~~~dvi~~~~E~--~~~ 86 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP--CRYVAHEFIQAKYDDEKALNQL-GQKCDVITYEFEN--ISA 86 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT--TGGGSSEEEECCTTCHHHHHHH-HHHCSEEEESSTT--SCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh--hhhhCCEEEECCCCCHHHHHHH-HHhCCcceecccc--cCH
Confidence 3469999999999999999999999999999887632 1222335788999999988776 3567876443333 232
Q ss_pred HHHHHHHH---hCCCceEEEeeCChHHHH-HHHhCCCC
Q 000968 1089 RTVWALSK---YFPNVKTFVRAHDIDHGL-NLEKAGAT 1122 (1207)
Q Consensus 1089 ~i~l~aR~---l~P~i~IIaRa~d~~~~~-~L~~aGAd 1122 (1207)
..+..+.+ ..|+...+..+.|..... .++++|+.
T Consensus 87 ~~l~~l~~~~~v~p~~~~~~~~~dK~~~k~~l~~~Gip 124 (377)
T 3orq_A 87 QQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTK 124 (377)
T ss_dssp HHHHHHHHHSCCTTTTHHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHHHHHhhhcCCCCCHHHHHHhcCHHHHHHHHHHCCCC
Confidence 22222222 345566666667765444 56777754
No 138
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.75 E-value=0.097 Score=55.24 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=58.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCC--CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.| .|.+|+.+++.|.+.|. +|++++++++..+.....++.++.+|.+|++.+.++ ++..|.+|-+...
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~ 94 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA-FQGHDVGFCCLGT 94 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG-GSSCSEEEECCCC
T ss_pred eEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHH-hcCCCEEEECCCc
Confidence 578888 68999999999999999 999999988765443345688899999999888765 4578999887764
No 139
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.73 E-value=0.14 Score=50.40 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=52.9
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhh-hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIG-RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~-r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
..++.|+|.|.+|+.+++.|...|.+++++|+++++.+.+ +..+..+.. ..+.+-+ +.++|.||.+++.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~--~~~~~~~----~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVL--INDIDSL----IKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEE--CSCHHHH----HHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEe--ecCHHHH----hcCCCEEEEeCCCCC
Confidence 4579999999999999999999999999999999988765 344543322 2222211 356899999998763
No 140
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=90.73 E-value=18 Score=37.77 Aligned_cols=41 Identities=10% Similarity=0.201 Sum_probs=17.8
Q ss_pred HhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000968 273 AENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAE 313 (1207)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~ 313 (1207)
...++.+++..+..++.++..++....+++.++..+.+...
T Consensus 109 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (284)
T 1c1g_A 109 ALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLK 149 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 33344444444444444444444444444444444443333
No 141
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.72 E-value=0.63 Score=55.45 Aligned_cols=92 Identities=13% Similarity=0.098 Sum_probs=60.6
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCC----EEEecCCCH-HHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLP----VYFGDAGSR-EVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~----vi~GDatd~-evL~~AgI~~A~~VViatddd 1084 (1207)
++-|+|.|.+|..++..|.+.|++|+++|+++++++.+.+. |.. -+.. ..+. +.+. +++++|.|+++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~-~~~~~e~v~--~l~~aDvVilaVp~~ 79 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAA--SLKKPRKALILVQAG 79 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHH--HBCSSCEEEECCCCS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE-ECCHHHHHh--cccCCCEEEEecCCh
Confidence 47799999999999999999999999999999998877643 411 0111 2233 3333 234689999999886
Q ss_pred chhHHHHHHHHH-hCCCceEEEe
Q 000968 1085 GANYRTVWALSK-YFPNVKTFVR 1106 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~-l~P~i~IIaR 1106 (1207)
.....++..+.. +.|+ .+|+-
T Consensus 80 ~~v~~vl~~l~~~l~~g-~iIId 101 (478)
T 1pgj_A 80 AATDSTIEQLKKVFEKG-DILVD 101 (478)
T ss_dssp HHHHHHHHHHHHHCCTT-CEEEE
T ss_pred HHHHHHHHHHHhhCCCC-CEEEE
Confidence 433333333333 3444 34443
No 142
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.70 E-value=0.11 Score=60.22 Aligned_cols=120 Identities=16% Similarity=0.078 Sum_probs=79.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec---------C---------CCHHHHHhcC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD---------A---------GSREVLHKVG 1070 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD---------a---------td~evL~~Ag 1070 (1207)
..+++|+|.|.+|..+++.+...|..|+++|.++++.+.+.+.|..++.-+ + .+.+.|.+ -
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e-~ 262 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED-A 262 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH-H
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH-H
Confidence 357999999999999999999999999999999999988888776654311 1 11233433 3
Q ss_pred ccccCEEEEecCCc---chhHHHHHHHHHhCCCceEEEeeCChHH-HH------HHHhCCCCeeecCCc
Q 000968 1071 AERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAHDIDH-GL------NLEKAGATAVVPETL 1129 (1207)
Q Consensus 1071 I~~A~~VViatddd---~~Ni~i~l~aR~l~P~i~IIaRa~d~~~-~~------~L~~aGAd~VI~p~~ 1129 (1207)
+.+||.||.+...+ ...+..-..++.+.|..-||-.+-+..- .+ ....-|+.++-.++.
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl 331 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL 331 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence 68999998875332 2233344566777787666655544311 00 123456666655554
No 143
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.59 E-value=0.31 Score=52.52 Aligned_cols=71 Identities=14% Similarity=0.019 Sum_probs=50.9
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHH--------------HHhhhh-CCCCEEEecCCCHHHHHhcCccc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDR--------------VAIGRA-LDLPVYFGDAGSREVLHKVGAER 1073 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~--------------ve~~r~-~g~~vi~GDatd~evL~~AgI~~ 1073 (1207)
..++-|+|.|.+|..+++.|.+.|+++++.|+++++ .+.+.. .+... .. +..+. +++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~e~-----~~~ 90 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH-LA--AFADV-----AAG 90 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE-EE--EHHHH-----HHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee-cc--CHHHH-----Hhc
Confidence 456889999999999999999999999999999987 443332 23221 11 11222 356
Q ss_pred cCEEEEecCCcchh
Q 000968 1074 ACAAAITLDTPGAN 1087 (1207)
Q Consensus 1074 A~~VViatddd~~N 1087 (1207)
||.||++++++...
T Consensus 91 aDvVilavp~~~~~ 104 (245)
T 3dtt_A 91 AELVVNATEGASSI 104 (245)
T ss_dssp CSEEEECSCGGGHH
T ss_pred CCEEEEccCcHHHH
Confidence 89999999877433
No 144
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.53 E-value=0.3 Score=51.50 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=31.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e 1043 (1207)
.++.|+|.|.+|..++..|.+.|.+++++|++++
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3588999999999999999999999999998865
No 145
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=90.45 E-value=0.27 Score=58.69 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=64.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+.|+|+|++|+.+++.|+..|.+|+++|+++.........|+.+ .+ ++++ +.+||.|++++... ++.
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-----~~---l~el-l~~aDiVi~~~~t~--~lI 326 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-----VT---LDEI-VDKGDFFITCTGNV--DVI 326 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-----CC---HHHH-TTTCSEEEECCSSS--SSB
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-----cC---HHHH-HhcCCEEEECCChh--hhc
Confidence 3688999999999999999999999999999998765555566643 22 3322 57899999986443 222
Q ss_pred HHHHHHHhCCCceEEEeeCChH--HHHHHHh
Q 000968 1090 TVWALSKYFPNVKTFVRAHDID--HGLNLEK 1118 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d~~--~~~~L~~ 1118 (1207)
.....+.+-|+..++=-.+..- +...|.+
T Consensus 327 ~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 327 KLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 2234455666654443333322 3444444
No 146
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=90.41 E-value=1.9 Score=40.57 Aligned_cols=98 Identities=8% Similarity=-0.013 Sum_probs=64.9
Q ss_pred cCCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEE
Q 000968 1031 RLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1031 ~gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
....++++|.|+...+.+ +..++.+.. -.+-.+.+....-...+.+++-..-+. .-+.++..+|+.+|++++|+
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~-~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (137)
T 3hdg_A 6 VALKILIVEDDTDAREWLSTIISNHFPEVWS-AGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIV 84 (137)
T ss_dssp -CCCEEEECSCHHHHHHHHHHHHTTCSCEEE-ESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEE
T ss_pred cccEEEEEeCCHHHHHHHHHHHHhcCcEEEE-ECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEE
Confidence 346788888887655433 334444433 223344555555567888888765443 44678888999999999988
Q ss_pred eeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
-+... +......++|++.++...+
T Consensus 85 ~s~~~~~~~~~~~~~~g~~~~l~kP~ 110 (137)
T 3hdg_A 85 ISAFSEMKYFIKAIELGVHLFLPKPI 110 (137)
T ss_dssp CCCCCCHHHHHHHHHHCCSEECCSSC
T ss_pred EecCcChHHHHHHHhCCcceeEcCCC
Confidence 87654 4677788999999885544
No 147
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.40 E-value=0.98 Score=50.24 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=58.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChH----HHHhhhh-------CCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSD----RVAIGRA-------LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e----~ve~~r~-------~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
.+++|.| .|-+|+.+++.|.+.|+.|+++++++. ..+.++. .++.++.||.+|++.+.++= +++|.|
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~V 104 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-KGVDHV 104 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-TTCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-cCCCEE
Confidence 4688888 599999999999999999999998543 3333333 67899999999999988763 488998
Q ss_pred EEecCC
Q 000968 1078 AITLDT 1083 (1207)
Q Consensus 1078 Viatdd 1083 (1207)
|-+...
T Consensus 105 ih~A~~ 110 (351)
T 3ruf_A 105 LHQAAL 110 (351)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 877653
No 148
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=90.39 E-value=0.24 Score=65.37 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=15.5
Q ss_pred CcHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 000968 149 TTDELRELLMNAMKELEVAQLNSTMFEEKAQ 179 (1207)
Q Consensus 149 ~~~~l~~~l~~a~~~~e~a~~~~~~~e~~~~ 179 (1207)
.+++|++-|++..++++..+-.-.-++++.+
T Consensus 865 eL~el~~~L~~le~~l~ele~~l~~Le~e~~ 895 (1184)
T 1i84_S 865 ELQRTKERQQKAEAELKELEQKHTQLCEEKN 895 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666665555544443333344333
No 149
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.08 E-value=1.1 Score=50.23 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=63.7
Q ss_pred cccccCC-CchHHHHHHHHHhcCC-------CeEeecCCh--HHHH----hhhhCCCCEEEecCCCHHHHHhcCccccCE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLI-------PFVALDVRS--DRVA----IGRALDLPVYFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi-------~vvVID~D~--e~ve----~~r~~g~~vi~GDatd~evL~~AgI~~A~~ 1076 (1207)
+++|+|. |.+|+.++..|...|+ +++++|.++ ++.+ .+....++++ +|..+.+.+.++ +..+|.
T Consensus 6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a-~~~~D~ 83 (327)
T 1y7t_A 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVA-FKDADY 83 (327)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHH-TTTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHH-hCCCCE
Confidence 5899997 9999999999998886 799999875 2221 2222234444 676654444433 367899
Q ss_pred EEEecCCc-----------chhHH----HHHHHHHhC-CCceEEEeeCC
Q 000968 1077 AAITLDTP-----------GANYR----TVWALSKYF-PNVKTFVRAHD 1109 (1207)
Q Consensus 1077 VViatddd-----------~~Ni~----i~l~aR~l~-P~i~IIaRa~d 1109 (1207)
||.+.... ..|.. ++..+++.. |+.++++-.+-
T Consensus 84 Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp 132 (327)
T 1y7t_A 84 ALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNP 132 (327)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCc
Confidence 98876432 24543 345677776 88777665543
No 150
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=90.07 E-value=1.9 Score=40.83 Aligned_cols=99 Identities=7% Similarity=-0.008 Sum_probs=64.0
Q ss_pred cCCCeEeecCChHHHHhh----hhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEE
Q 000968 1031 RLIPFVALDVRSDRVAIG----RAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTF 1104 (1207)
Q Consensus 1031 ~gi~vvVID~D~e~ve~~----r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~II 1104 (1207)
....++++|.|+...+.+ +.. ++.++.--.+-.+.+....-...+.+++-..-+. ..+..+..+|+.+|..+||
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 87 (143)
T 2qv0_A 8 EKMKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIV 87 (143)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEE
T ss_pred CceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEE
Confidence 345688888887655433 222 5554432223344555444456788888765543 4467788888888888888
Q ss_pred EeeCChHHHHHHHhCCCCeeecCCc
Q 000968 1105 VRAHDIDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1105 aRa~d~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+.+...+......++|++.++...+
T Consensus 88 ~~s~~~~~~~~~~~~g~~~~l~KP~ 112 (143)
T 2qv0_A 88 FITAWKEHAVEAFELEAFDYILKPY 112 (143)
T ss_dssp EEESCCTTHHHHHHTTCSEEEESSC
T ss_pred EEeCCHHHHHHHHhCCcceEEeCCC
Confidence 8777777778888999998875543
No 151
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.06 E-value=0.77 Score=50.52 Aligned_cols=41 Identities=20% Similarity=0.286 Sum_probs=36.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA 1050 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~ 1050 (1207)
.++.|+|.|.+|..++..|...|++|+++|.+++..+.+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 46889999999999999999999999999999998876643
No 152
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=90.06 E-value=1.5 Score=43.26 Aligned_cols=109 Identities=10% Similarity=0.111 Sum_probs=70.5
Q ss_pred HHHHHHHHHhcCCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh-HHHHHHHH
Q 000968 1021 GQIIAQLLSERLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALS 1095 (1207)
Q Consensus 1021 G~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N-i~i~l~aR 1095 (1207)
|.++.+.+...+..+.+||.|+...+.+ +..|+.++.--..-.+.|+...-...|.|++=..-|.-| +.++..+|
T Consensus 1 gs~~~e~~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 1 GSHMMEAILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp --------CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CchhhHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 3445555666778899999998765433 567876443222334556666667889998888777655 67777887
Q ss_pred Hh--CCCceEEEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1096 KY--FPNVKTFVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1096 ~l--~P~i~IIaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+. .++++||+-+.. .+......++||+..+..-+
T Consensus 81 ~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~ 118 (134)
T 3to5_A 81 ADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPF 118 (134)
T ss_dssp HSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSC
T ss_pred hCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCC
Confidence 54 477888776653 46777788999998885544
No 153
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=89.96 E-value=0.86 Score=51.89 Aligned_cols=123 Identities=12% Similarity=0.175 Sum_probs=81.5
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
-++.|+|+|.+|+..++.|... +..++ +.|.|+++.+.++..|++++ ++.+-+.+- .+.|+|+++++++..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~----~~~~~ll~~--~~~D~V~i~tp~~~h- 78 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIY----ESYEAVLAD--EKVDAVLIATPNDSH- 78 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBC----SCHHHHHHC--TTCCEEEECSCGGGH-
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCcee----CCHHHHhcC--CCCCEEEEcCCcHHH-
Confidence 3689999999999999999876 56665 56999999877766777543 344444322 467999999988643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+....+-++.++.
T Consensus 79 ~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (359)
T 3e18_A 79 KELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFE 139 (359)
T ss_dssp HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHH
Confidence 34444444444 467775 5666666655 455766555 3345566666666664
No 154
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=89.92 E-value=1.5 Score=50.48 Aligned_cols=134 Identities=16% Similarity=0.060 Sum_probs=83.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..++|+|+|.+|+.+++.|...|..|++.|.|+++.+.....+...+- ..+.|. .++|.++-+.-....|..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~----~~ell~----~~~DIliP~A~~~~I~~~ 247 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA----LEDVLS----TPCDVFAPCAMGGVITTE 247 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC----GGGGGG----CCCSEEEECSCSCCBCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeC----hHHhhc----CccceecHhHHHhhcCHH
Confidence 468899999999999999999999999999998763333444543331 123332 267776543323233333
Q ss_pred HHHHHHHhCCCceEEEeeCC-----hHHHHHHHhCCCCeeecCCcH-HHHHHHHHH-HHHcCCCHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHD-----IDHGLNLEKAGATAVVPETLE-PSLQLAAAV-LAQAKLPASEIAATINEFR 1158 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d-----~~~~~~L~~aGAd~VI~p~~e-aal~La~~i-L~~lg~~~~ei~~~i~~~r 1158 (1207)
. ++.+. .++|+..-+ ++..+.|++-|+ ++.|... -+--++..- +..++.+.+++..-++.+.
T Consensus 248 ~---~~~lk--~~iVie~AN~p~t~~eA~~~L~~~gI--lv~Pd~~aNaGGV~~s~~~E~~~w~~e~v~~~l~~i~ 316 (355)
T 1c1d_A 248 V---ARTLD--CSVVAGAANNVIADEAASDILHARGI--LYAPDFVANAGGAIHLVGREVLGWSESVVHERAVAIG 316 (355)
T ss_dssp H---HHHCC--CSEECCSCTTCBCSHHHHHHHHHTTC--EECCHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHTHH
T ss_pred H---HhhCC--CCEEEECCCCCCCCHHHHHHHHhCCE--EEECCeEEcCCCeeeeeeehhcCCCHHHHHHHHHHHH
Confidence 3 33343 467766543 356777888774 3344332 223444444 5557888888777777665
No 155
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=89.89 E-value=1.5 Score=42.70 Aligned_cols=57 Identities=9% Similarity=0.057 Sum_probs=43.2
Q ss_pred ccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1073 RACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1073 ~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
..+.|++-..-+. .-+.++..+|+.+|+++||+.+.. .+......++|++.++...+
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~ 142 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPL 142 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSC
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCC
Confidence 5678777665443 446788889999999999888765 66777888999998885543
No 156
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=89.81 E-value=0.45 Score=50.18 Aligned_cols=72 Identities=13% Similarity=0.070 Sum_probs=57.0
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh--CCCCEEEecCCCHHHHHhc--CccccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~--~g~~vi~GDatd~evL~~A--gI~~A~~VViatd 1082 (1207)
+++|.|. |-+|+.+++.|.+.|..|++++++++..+.... .+..++.+|.++++.++++ ...+.|.+|-...
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5777775 789999999999999999999999887765432 3678889999999887665 2345788877654
No 157
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.80 E-value=1.3 Score=50.43 Aligned_cols=130 Identities=21% Similarity=0.134 Sum_probs=80.5
Q ss_pred cccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHH----hhhh-----CCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA----IGRA-----LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve----~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
..++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.. .+..+..|| ......||.|
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------~~a~~~aDiV 80 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------YSDAKDADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------HHHhcCCCEE
Confidence 3479999999999999999998887 8999999998765 1211 123333332 2347899999
Q ss_pred EEecCCc-----------chh----HHHHHHHHHhCCCceEEEeeCChHHH--HHHHh-CC--CCeeecC-CcHHHHHHH
Q 000968 1078 AITLDTP-----------GAN----YRTVWALSKYFPNVKTFVRAHDIDHG--LNLEK-AG--ATAVVPE-TLEPSLQLA 1136 (1207)
Q Consensus 1078 Viatddd-----------~~N----i~i~l~aR~l~P~i~IIaRa~d~~~~--~~L~~-aG--Ad~VI~p-~~eaal~La 1136 (1207)
|++.+.+ ..| ..++..+++..|+..+++-+ ++-+. ..+.+ .| ...|+-- +..-+.++-
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt-NPvdi~t~~~~k~~g~p~~rviG~gt~LD~~R~~ 159 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA-NPVDILTYATWKLSGFPKNRVVGSGTSLDTARFR 159 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTTCCSEEEECS-SSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc-CchHHHHHHHHHhcCCCHHHeeeecccCcHHHHH
Confidence 9987654 234 35556778889998766655 55332 22222 24 2456643 433334555
Q ss_pred HHHHHHcCCCH
Q 000968 1137 AAVLAQAKLPA 1147 (1207)
Q Consensus 1137 ~~iL~~lg~~~ 1147 (1207)
..+-+.+++++
T Consensus 160 ~~la~~lgv~~ 170 (326)
T 3vku_A 160 QSIAKMVNVDA 170 (326)
T ss_dssp HHHHHHHTSCG
T ss_pred HHHHHHhCCCH
Confidence 55555555544
No 158
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.72 E-value=0.48 Score=54.33 Aligned_cols=91 Identities=14% Similarity=0.070 Sum_probs=59.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEE-Eec---------CCCHHHHHhcCccccCEEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVY-FGD---------AGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi-~GD---------atd~evL~~AgI~~A~~VVi 1079 (1207)
-++.|+|.|.+|..++..|.+.|++|+++|+++++++.+++.+.... ..+ .+|. .++ +..||.||+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~---~ea-~~~aDvVil 105 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDL---KAS-LEGVTDILI 105 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCH---HHH-HTTCCEEEE
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCH---HHH-HhcCCEEEE
Confidence 36899999999999999999999999999999999887765432110 000 0222 111 357899999
Q ss_pred ecCCcchhHHHHHHHHHhC-CCceEEE
Q 000968 1080 TLDTPGANYRTVWALSKYF-PNVKTFV 1105 (1207)
Q Consensus 1080 atddd~~Ni~i~l~aR~l~-P~i~IIa 1105 (1207)
+++.. ....++..++..- |+..++.
T Consensus 106 aVp~~-~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 106 VVPSF-AFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp CCCHH-HHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCHH-HHHHHHHHHHHhcCCCCEEEE
Confidence 98765 2223334444433 4443443
No 159
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.68 E-value=0.26 Score=53.66 Aligned_cols=104 Identities=13% Similarity=0.004 Sum_probs=67.4
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh-H
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-Y 1088 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N-i 1088 (1207)
++.|+|.|.+|+.+++.|.+.|..+++.|+++++.+.+.+ .+.. + . .+.++ .++|.||.+++..... .
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~---~---~~~~~--~~~Divi~~tp~~~~~~~ 187 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A---V---PLEKA--REARLLVNATRVGLEDPS 187 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E---C---CGGGG--GGCSEEEECSSTTTTCTT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h---h---hHhhc--cCCCEEEEccCCCCCCCC
Confidence 7999999999999999999999999999999988766543 2432 1 1 23444 7899999999876321 0
Q ss_pred HHHHHHHHhCCCceEEEeeCCh---HHHHHHHhCCCCeee
Q 000968 1089 RTVWALSKYFPNVKTFVRAHDI---DHGLNLEKAGATAVV 1125 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~aGAd~VI 1125 (1207)
.-......+.|+..++-...++ .-...+++.|+. ++
T Consensus 188 ~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~-~v 226 (263)
T 2d5c_A 188 ASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLK-VQ 226 (263)
T ss_dssp CCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCE-EE
T ss_pred CCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCE-EE
Confidence 0000122334554444333332 244566778884 44
No 160
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.68 E-value=0.6 Score=55.62 Aligned_cols=73 Identities=22% Similarity=0.387 Sum_probs=52.5
Q ss_pred cccccCCCchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHH-------------hcCccccC
Q 000968 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLH-------------KVGAERAC 1075 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~-------------~AgI~~A~ 1075 (1207)
++.|+|.|.+|..++..|.+. |++|+++|.|+++++.+++.+.+++. ..-.+.+. ...+.+||
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e--~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYE--PGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCC--TTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCC--CCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 689999999999999999988 78999999999999988764443321 10011111 01235789
Q ss_pred EEEEecCCcc
Q 000968 1076 AAAITLDTPG 1085 (1207)
Q Consensus 1076 ~VViatddd~ 1085 (1207)
.++++++++.
T Consensus 89 vvii~Vptp~ 98 (481)
T 2o3j_A 89 LIFISVNTPT 98 (481)
T ss_dssp EEEECCCCCB
T ss_pred EEEEecCCcc
Confidence 9999987653
No 161
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.59 E-value=0.26 Score=56.92 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=65.3
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~- 1086 (1207)
...++|+|.|.+|+.+++.+...|.+|+++|.++++.+.+++ .|..+.. +..+.+.+.+. +.++|.||.++..+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~-~~~~~~~l~~~-l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHT-RYSSAYELEGA-VKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEE-EECCHHHHHHH-HHHCSEEEECCCCTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEe-ccCCHHHHHHH-HcCCCEEEECCCcCCCC
Confidence 357999999999999999999999999999999998877765 4544322 22233334332 3589999998765532
Q ss_pred --hHHHHHHHHHhCCCceEEEee
Q 000968 1087 --NYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1087 --Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
.+.....++.+.|...++-..
T Consensus 246 t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 246 APKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CcceecHHHHhcCCCCcEEEEEe
Confidence 111223345556666665554
No 162
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=89.54 E-value=0.76 Score=51.73 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=81.1
Q ss_pred cccccCC-CchHHHHHHHHHhcC--CCeEeecCChHHHH--hhhhCCCC-EEEec-C-CCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERL--IPFVALDVRSDRVA--IGRALDLP-VYFGD-A-GSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~g--i~vvVID~D~e~ve--~~r~~g~~-vi~GD-a-td~evL~~AgI~~A~~VViatd 1082 (1207)
++.|+|. |.+|+.++..|...+ ..++++|.|+.... .+.....+ -+.+- + +|. ++ .+..||.||++.+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~---~~-a~~~aDvVvi~ag 77 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQL---PD-CLKGCDVVVIPAG 77 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGH---HH-HHTTCSEEEECCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCH---HH-HhCCCCEEEECCC
Confidence 4789998 999999999999887 57999999973222 22222122 12221 1 122 21 2468899999875
Q ss_pred Cc-----------chhH----HHHHHHHHhCCCceEEEeeCChHHHH------HHHhCC---CCeeecCCcHHHHHHHHH
Q 000968 1083 TP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDHGL------NLEKAG---ATAVVPETLEPSLQLAAA 1138 (1207)
Q Consensus 1083 dd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~~------~L~~aG---Ad~VI~p~~eaal~La~~ 1138 (1207)
.+ ..|. .++..+++..|+..++. +.++-+.- .+++.+ ...|+--+..-..++-..
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~ 156 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI-ISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAF 156 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHH
Confidence 44 1333 34456677899987777 56665543 366665 677885566444455555
Q ss_pred HHHHcCCC
Q 000968 1139 VLAQAKLP 1146 (1207)
Q Consensus 1139 iL~~lg~~ 1146 (1207)
+-+.++++
T Consensus 157 la~~l~v~ 164 (314)
T 1mld_A 157 VAELKGLD 164 (314)
T ss_dssp HHHHTTCC
T ss_pred HHHHhCcC
Confidence 55555444
No 163
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.50 E-value=0.83 Score=51.64 Aligned_cols=134 Identities=13% Similarity=0.081 Sum_probs=81.7
Q ss_pred cccccCC-CchHHHHHHHHHhcCC-------CeEeecCC----hHHHHh----hhhCCCCEEEecCCCHHHHHhcCcccc
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLI-------PFVALDVR----SDRVAI----GRALDLPVYFGDAGSREVLHKVGAERA 1074 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi-------~vvVID~D----~e~ve~----~r~~g~~vi~GDatd~evL~~AgI~~A 1074 (1207)
++.|+|. |.+|+.++..|...+. .++++|.+ +++.+- +.....++ .+|.....-+.++ +..|
T Consensus 7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~a-l~~a 84 (329)
T 1b8p_A 7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTA-FKDA 84 (329)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHH-TTTC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHH-hCCC
Confidence 6899998 9999999999988775 79999999 554431 22222232 2443332223332 5688
Q ss_pred CEEEEecCCc-----------chhH----HHHHHHHHhC-CCceEEEeeCChH--HHHHHHhC--C--CCeeecCCcHHH
Q 000968 1075 CAAAITLDTP-----------GANY----RTVWALSKYF-PNVKTFVRAHDID--HGLNLEKA--G--ATAVVPETLEPS 1132 (1207)
Q Consensus 1075 ~~VViatddd-----------~~Ni----~i~l~aR~l~-P~i~IIaRa~d~~--~~~~L~~a--G--Ad~VI~p~~eaa 1132 (1207)
|.||++...+ ..|. .++..+++.. |+.+++.-+ ++- ....+.+. | .+.|+..+..-+
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~ 163 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAYIAMKSAPSLPAKNFTAMLRLDH 163 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHHHHHHTCTTSCGGGEEECCHHHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHHHHHHHcCCCCHHHEEEeecHHH
Confidence 9999887643 2443 3555778885 987777666 543 23333333 2 445666665545
Q ss_pred HHHHHHHHHHcCCCH
Q 000968 1133 LQLAAAVLAQAKLPA 1147 (1207)
Q Consensus 1133 l~La~~iL~~lg~~~ 1147 (1207)
.++-..+-+.+++++
T Consensus 164 ~r~~~~la~~lgv~~ 178 (329)
T 1b8p_A 164 NRALSQIAAKTGKPV 178 (329)
T ss_dssp HHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHhCcCH
Confidence 555555555555544
No 164
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.40 E-value=0.34 Score=52.95 Aligned_cols=69 Identities=14% Similarity=-0.037 Sum_probs=55.0
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
+++|.|. |-+|+.+++.|.+.|++|++++++++........++.++.||.++++ +.++- +. |.||-+..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~-~~-d~vih~A~ 71 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGI-KG-DVVFHFAA 71 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTC-CC-SEEEECCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhc-CC-CEEEECCC
Confidence 4678887 99999999999999999999999876654444667899999999999 65443 33 88876654
No 165
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=89.36 E-value=7.6 Score=39.57 Aligned_cols=111 Identities=22% Similarity=0.227 Sum_probs=82.9
Q ss_pred HHHhchhHHHHHHHhhhHhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCcccccCCCC
Q 000968 184 AAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDG 263 (1207)
Q Consensus 184 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1207)
....|.++-..+-+++.|.=..=..--.+|-.-++.+...+.-|--||.|-+-|.-+..-. ++++
T Consensus 43 k~~eLEeeL~~v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kL---------------Ek~i 107 (155)
T 2efr_A 43 KSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKL---------------EKSI 107 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred HHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 3344566655555666653333333334466677788888899999999988887776653 2334
Q ss_pred cchhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHH
Q 000968 264 KEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLN 309 (1207)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~ 309 (1207)
.+=+..+...++..+.++..|...=.+|..++.+--+|.+||.||.
T Consensus 108 d~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~~~~~ 153 (155)
T 2efr_A 108 DDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARLK 153 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHhh
Confidence 4456788899999999999999999999999999999999999985
No 166
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.34 E-value=0.61 Score=52.56 Aligned_cols=82 Identities=20% Similarity=0.087 Sum_probs=60.2
Q ss_pred ccccccCCCchHHH-HHHHHHhcCCCeEeecCCh--HHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVRS--DRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~gi~vvVID~D~--e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.|+.++|.|..|.. +++.|.++|++|.+.|..+ +..+.+++.|++++.|. +++.+.. ..+|.||....-+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~l~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQLDE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGGGGS---CCCSEEEECTTCCTT
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHHcCC---CCCCEEEECCCcCCC
Confidence 47899999999996 9999999999999999864 45667888899999883 3332211 368888887666555
Q ss_pred hHHHHHHHHHh
Q 000968 1087 NYRTVWALSKY 1097 (1207)
Q Consensus 1087 Ni~i~l~aR~l 1097 (1207)
|-.+ ..+|+.
T Consensus 80 ~p~~-~~a~~~ 89 (326)
T 3eag_A 80 MDVV-EAILNL 89 (326)
T ss_dssp CHHH-HHHHHT
T ss_pred CHHH-HHHHHc
Confidence 5443 334444
No 167
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.28 E-value=0.56 Score=52.50 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=37.8
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL 1051 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~ 1051 (1207)
..++-|+|.|.+|..++..|. .|++|+++|.+++..+.+...
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH
Confidence 456899999999999999999 999999999999998877654
No 168
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.25 E-value=0.47 Score=52.28 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=59.0
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----CCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.+++|.| .|.+|+.+++.|.+.|..++++++++++.+.+.+ .+..++.+|.++++.++++ ++++|.+|-+++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~DvlVn~ag 197 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VKGAHFVFTAGA 197 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH-HHhCCEEEECCC
Confidence 4688999 9999999999999999999999999887654421 2677888999998877654 456899988885
No 169
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.23 E-value=2.4 Score=47.98 Aligned_cols=131 Identities=18% Similarity=0.115 Sum_probs=82.7
Q ss_pred cccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh----hhC----CCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RAL----DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~----r~~----g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
+.++.|+|.|.+|..++-.|...+. .++++|.|+++.+.. ... .-..+.+| + ...+..||.||
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~--~-----~~a~~~aDvVi 81 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSA--E-----YSDAKDADLVV 81 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC--C-----GGGGGGCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEEC--C-----HHHhCCCCEEE
Confidence 3579999999999999999987775 799999998876431 111 11123332 2 22378999999
Q ss_pred EecCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCC--CeeecC-CcHHHHHHHH
Q 000968 1079 ITLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGA--TAVVPE-TLEPSLQLAA 1137 (1207)
Q Consensus 1079 iatddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGA--d~VI~p-~~eaal~La~ 1137 (1207)
++.+.+. .|. .++..+++.+|+..+++- .++-+. ..+ +..|. ..||-- +..-..++-.
T Consensus 82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~ 160 (326)
T 2zqz_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA-ANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQ 160 (326)
T ss_dssp ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC-SSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe-CCcHHHHHHHHHHHcCCCHHHEEEccccchHHHHHH
Confidence 9986652 343 344566778999888884 665433 223 23343 367644 4444445555
Q ss_pred HHHHHcCCCH
Q 000968 1138 AVLAQAKLPA 1147 (1207)
Q Consensus 1138 ~iL~~lg~~~ 1147 (1207)
.+-+.+++++
T Consensus 161 ~la~~lgv~~ 170 (326)
T 2zqz_A 161 SIAEMVNVDA 170 (326)
T ss_dssp HHHHHHTCCG
T ss_pred HHHHHhCCCh
Confidence 6656666654
No 170
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.15 E-value=0.29 Score=55.47 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=57.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.++++.|++++..+.....|.... +-.+.+ .++|.|+++++....+..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~l~e~l-----~~aDvVi~~vp~~~~t~~ 226 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV----STPELA-----AQSDFIVVACSLTPATEG 226 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC----CHHHHH-----HHCSEEEECCCCCTTTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC----CHHHHH-----hhCCEEEEeCCCChHHHH
Confidence 35889999999999999999999999999998776655555554321 112333 478999999876533221
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ......+.|+..+|
T Consensus 227 ~i~~~~~~~mk~gailI 243 (330)
T 2gcg_A 227 LCNKDFFQKMKETAVFI 243 (330)
T ss_dssp CBSHHHHHHSCTTCEEE
T ss_pred hhCHHHHhcCCCCcEEE
Confidence 1 22334455664443
No 171
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.01 E-value=0.91 Score=51.71 Aligned_cols=85 Identities=9% Similarity=0.063 Sum_probs=58.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|+..|.++++.|++++. +.....|... .+.+.+ +.++|.|+++++....+..
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV~l~~P~t~~t~~ 235 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-----LPLEEI----WPLCDFITVHTPLLPSTTG 235 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-----CCHHHH----GGGCSEEEECCCCCTTTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-----CCHHHH----HhcCCEEEEecCCCHHHHH
Confidence 35889999999999999999999999999998765 3445556532 233222 3578999999987654332
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ...+..+-|+..+|
T Consensus 236 li~~~~l~~mk~gailI 252 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVV 252 (335)
T ss_dssp SBCHHHHTTSCTTEEEE
T ss_pred hhCHHHHhhCCCCcEEE
Confidence 2 23345556664444
No 172
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=88.98 E-value=1.2 Score=42.51 Aligned_cols=96 Identities=8% Similarity=0.058 Sum_probs=57.1
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHH--hCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~--l~P~i~IIa 1105 (1207)
..++++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-.+-+. .-+..+..+|+ .+|++++|+
T Consensus 9 ~~iLivd~~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ 87 (147)
T 2zay_A 9 WRIMLVDTQLPALAASISALSQEGFDIIQ-CGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIA 87 (147)
T ss_dssp EEEEEECTTGGGGHHHHHHHHHHTEEEEE-ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCCeEEE-eCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEE
Confidence 3455555555433222 233444432 122233444444446788888765443 34667788887 678888888
Q ss_pred eeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.+.. .+......++|++.++...+
T Consensus 88 ls~~~~~~~~~~~~~~g~~~~l~kp~ 113 (147)
T 2zay_A 88 LSGRATAKEEAQLLDMGFIDFIAKPV 113 (147)
T ss_dssp EESSCCHHHHHHHHHHTCSEEEESSC
T ss_pred EeCCCCHHHHHHHHhCCCCEEEeCCC
Confidence 7764 45666778899998885544
No 173
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.93 E-value=0.39 Score=54.53 Aligned_cols=96 Identities=20% Similarity=0.180 Sum_probs=64.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhh----hh----CC--CCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA----LD--LPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~----r~----~g--~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++..|...|+ +++++|.|+++++.. .. .+ ..+... +|. ++ .+..||.||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~e-a~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EA-ALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HH-HHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CCH---HH-HhCCCCEEE
Confidence 369999999999999999999887 899999999877652 11 11 122221 222 22 357899999
Q ss_pred EecCCcc----------------hh----HHHHHHHHHhCCCceEEEeeCChH
Q 000968 1079 ITLDTPG----------------AN----YRTVWALSKYFPNVKTFVRAHDID 1111 (1207)
Q Consensus 1079 iatddd~----------------~N----i~i~l~aR~l~P~i~IIaRa~d~~ 1111 (1207)
++.+.+. .| ..++..+.+..|+..++.-++-..
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 9973321 12 345567778889877665544433
No 174
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.92 E-value=0.48 Score=53.27 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=51.8
Q ss_pred cccccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCE----------EEecCCCHHHHHhcCccccCE
Q 000968 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPV----------YFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1007 ~lk~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~v----------i~GDatd~evL~~AgI~~A~~ 1076 (1207)
.+.-++.|+|.|.+|..++..|.+.|.+|+++++++++.+.+++.|.+. .. +++ . . ++.+|.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~---~~~---~-~-~~~aDv 83 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRAT---NDL---E-E-IKKEDI 83 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEE---SCG---G-G-CCTTEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEe---CCH---H-H-hcCCCE
Confidence 3445799999999999999999999999999999999998887665321 11 111 1 2 567788
Q ss_pred EEEecCC
Q 000968 1077 AAITLDT 1083 (1207)
Q Consensus 1077 VViatdd 1083 (1207)
|++++.+
T Consensus 84 Vil~vk~ 90 (335)
T 1z82_A 84 LVIAIPV 90 (335)
T ss_dssp EEECSCG
T ss_pred EEEECCH
Confidence 8888775
No 175
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=88.91 E-value=0.53 Score=55.46 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=59.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCCh----HHHHhhhhCCCCEEEecCCCHHHHHhcCccc-cCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRS----DRVAIGRALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~----e~ve~~r~~g~~vi~GDatd~evL~~AgI~~-A~~VViatddd 1084 (1207)
.|+.|+|.|..|..+++.|.+.|++|++.|.++ ...+.+++.|++++.|...+ +. ++. +|.||+...-+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~-~~-----~~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL-EL-----LDEDFCYMIKNPGIP 83 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG-GG-----GGSCEEEEEECTTSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH-Hh-----hcCCCCEEEECCcCC
Confidence 589999999999999999999999999999854 45567788899999987533 12 234 88888877666
Q ss_pred chhHHH
Q 000968 1085 GANYRT 1090 (1207)
Q Consensus 1085 ~~Ni~i 1090 (1207)
..|-.+
T Consensus 84 ~~~p~~ 89 (451)
T 3lk7_A 84 YNNPMV 89 (451)
T ss_dssp TTSHHH
T ss_pred CCChhH
Confidence 666443
No 176
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=88.90 E-value=0.56 Score=49.55 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=57.0
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh--CCCCEEEecCCCHHHHHhc--CccccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~--~g~~vi~GDatd~evL~~A--gI~~A~~VViatd 1082 (1207)
.+++|.|. |.+|+.+++.|.+.|..|++++++++..+.... .+..++.+|.++++.++++ ...+.|.+|-...
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 35777776 789999999999999999999999887765432 3677889999999987765 2335788776553
No 177
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.83 E-value=1 Score=50.55 Aligned_cols=128 Identities=17% Similarity=0.151 Sum_probs=76.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhh----h------CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGR----A------LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r----~------~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++..|...|+ +++++|.++++.+... . ....+... ++. ..+..||.||
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~-----~a~~~aDiVi 77 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DDY-----ADISGSDVVI 77 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SCG-----GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CCH-----HHhCCCCEEE
Confidence 368999999999999999999998 9999999988766421 0 12233321 121 2357899999
Q ss_pred EecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHH-HHHHHh-CC--CCeeecC-CcHHHHHHHHH
Q 000968 1079 ITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK-AG--ATAVVPE-TLEPSLQLAAA 1138 (1207)
Q Consensus 1079 iatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~-~~~L~~-aG--Ad~VI~p-~~eaal~La~~ 1138 (1207)
++++.+ ..|. .++..+++..|+..++.-++.... ...+.+ .| .+.|+-. +..-..++...
T Consensus 78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~~t~ld~~r~~~~ 157 (317)
T 2ewd_A 78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTF 157 (317)
T ss_dssp ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEESCHHHHHHHHHHH
T ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEeccCcHHHHHHHHH
Confidence 998432 1232 345566777888655555544332 223333 23 3567744 23333344444
Q ss_pred HHHHcC
Q 000968 1139 VLAQAK 1144 (1207)
Q Consensus 1139 iL~~lg 1144 (1207)
+.+.+|
T Consensus 158 la~~lg 163 (317)
T 2ewd_A 158 IAQHFG 163 (317)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 444443
No 178
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.82 E-value=0.3 Score=53.90 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=56.9
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-------CCCCEE-EecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVY-FGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-------~g~~vi-~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.+++|.|. |.+|+.+++.|.+.|+.|++++++++..+.+.. .++.++ .||.++++.++++ +++.|.||-+
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih~ 90 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV-IKGAAGVAHI 90 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT-TTTCSEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH-HcCCCEEEEe
Confidence 36888887 999999999999999999999999876554321 356677 7999999888765 4578888876
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 91 A~ 92 (342)
T 1y1p_A 91 AS 92 (342)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 179
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.80 E-value=0.32 Score=56.90 Aligned_cols=100 Identities=15% Similarity=0.039 Sum_probs=69.7
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec----------------CCC------HHHH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD----------------AGS------REVL 1066 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD----------------atd------~evL 1066 (1207)
..+|+|+|.|.+|..+++.+...|..|+++|.++++.+.+++.|.+++.-+ -++ .+.|
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 357999999999999999999999999999999999888887776543211 111 2244
Q ss_pred HhcCccccCEEEEecCCc---chhHHHHHHHHHhCCCceEEEeeCC
Q 000968 1067 HKVGAERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1067 ~~AgI~~A~~VViatddd---~~Ni~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
.++ +.+||.||.+.-.+ ...+..-..++.+.|..-||-.+-|
T Consensus 270 ~e~-l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d 314 (405)
T 4dio_A 270 AEH-IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE 314 (405)
T ss_dssp HHH-HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred HHH-hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence 433 57899998875333 2233344566777777655555533
No 180
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.74 E-value=0.6 Score=55.26 Aligned_cols=73 Identities=26% Similarity=0.275 Sum_probs=56.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhc--------------CccccC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--------------GAERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~A--------------gI~~A~ 1075 (1207)
..+.|+|.|.+|.-++-.|.+.|++|+.+|.|+++++.+++-..+++ ++.-++.++++ .+..|+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~--Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIY--EPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSC--CTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCC--CCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 35889999999999999999999999999999999998876544442 44444554332 156779
Q ss_pred EEEEecCCc
Q 000968 1076 AAAITLDTP 1084 (1207)
Q Consensus 1076 ~VViatddd 1084 (1207)
.++++.+.|
T Consensus 100 ~~~I~VpTP 108 (444)
T 3vtf_A 100 ATFIAVGTP 108 (444)
T ss_dssp EEEECCCCC
T ss_pred ceEEEecCC
Confidence 999887654
No 181
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=88.71 E-value=1.2 Score=41.66 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=63.1
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeC
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
.+.++|.|+...+.+ ...|+.++.--.+-.+.+....-...+.+++-.+-+. .....+..+|+.+|++++|+-+.
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 82 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSA 82 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeC
Confidence 467888887655433 3456666522222334444444467888888776554 44678889999999999988877
Q ss_pred ChH--HHHHHHhCCCCeeecC
Q 000968 1109 DID--HGLNLEKAGATAVVPE 1127 (1207)
Q Consensus 1109 d~~--~~~~L~~aGAd~VI~p 1127 (1207)
..+ ......++|++.++..
T Consensus 83 ~~~~~~~~~~~~~g~~~~l~k 103 (134)
T 3f6c_A 83 KNDHFYGKHCADAGANGFVSK 103 (134)
T ss_dssp C---CTHHHHHHTTCSEEEEG
T ss_pred CCChHHHHHHHHhCCCEEEeC
Confidence 554 6777889999988754
No 182
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.67 E-value=1.3 Score=49.79 Aligned_cols=131 Identities=15% Similarity=0.173 Sum_probs=81.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHh-hh--hCCC----CE-EEecCCCHHHHHhcCccccCEEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI-GR--ALDL----PV-YFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~-~r--~~g~----~v-i~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
.++.|+|.|.+|..++-.|...+. +++++|.|+++.+- .. .... ++ +.. .+ ...+..||.||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-----~~a~~~aDvVii 80 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GD-----YSDVKDCDVIVV 80 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-----GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CC-----HHHhCCCCEEEE
Confidence 479999999999999999998887 89999999876431 11 1111 11 222 12 223789999999
Q ss_pred ecCCcc-----------hh----HHHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCC--CeeecC-CcHHHHHHHHH
Q 000968 1080 TLDTPG-----------AN----YRTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGA--TAVVPE-TLEPSLQLAAA 1138 (1207)
Q Consensus 1080 atddd~-----------~N----i~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGA--d~VI~p-~~eaal~La~~ 1138 (1207)
+.+.+. .| ..++..+++.+|+..++.. .++-.. ..+ +..|. ..||-- +..-..++-..
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~~r~~~~ 159 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV-SNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRYL 159 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC-SSSHHHHHHHHHHHHTCCTTTEEECTTHHHHHHHHHH
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe-cCcHHHHHHHHHHHcCCCHHHEeccCCchHHHHHHHH
Confidence 887652 23 3455677788999888884 555322 222 33343 367744 54555666666
Q ss_pred HHHHcCCCHH
Q 000968 1139 VLAQAKLPAS 1148 (1207)
Q Consensus 1139 iL~~lg~~~~ 1148 (1207)
+-+.+++++.
T Consensus 160 la~~lgv~~~ 169 (318)
T 1y6j_A 160 LSEKLGVDVK 169 (318)
T ss_dssp HHTTTTCCTT
T ss_pred HHHHhCCCHH
Confidence 6677777653
No 183
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.66 E-value=0.33 Score=55.54 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=58.4
Q ss_pred ccccccCCCchHHHHHHHHH-hcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLS-ERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~-~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
..+-|+|+|.+|+.+++.|. ..|.++++.|++++..+.....|..+. .+.+.+ +.++|.|+++++....+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~el----l~~aDvVil~vp~~~~t~ 235 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV----DSLEEL----ARRSDCVSVSVPYMKLTH 235 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----HHHCSEEEECCCCSGGGT
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe----CCHHHH----hccCCEEEEeCCCChHHH
Confidence 35889999999999999999 999999999998876655544454322 233222 247899999988754332
Q ss_pred HH--HHHHHHhCCCceEE
Q 000968 1089 RT--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1089 ~i--~l~aR~l~P~i~II 1104 (1207)
.+ ....+.+.|+..+|
T Consensus 236 ~li~~~~l~~mk~gaili 253 (348)
T 2w2k_A 236 HLIDEAFFAAMKPGSRIV 253 (348)
T ss_dssp TCBCHHHHHHSCTTEEEE
T ss_pred HHhhHHHHhcCCCCCEEE
Confidence 21 23344556664333
No 184
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.66 E-value=2.5 Score=47.53 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=80.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh----hh------CCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RA------LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~----r~------~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
.++.|+|.|.+|..++..|...+. +++++|.|+++.+.. .. ... -+.+| + ...+..||.|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~-~v~~~--~-----~~a~~~aDvV 78 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTV-RVKAG--E-----YSDCHDADLV 78 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCC-EEEEC--C-----GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCe-EEEeC--C-----HHHhCCCCEE
Confidence 368999999999999999988774 899999998766421 11 122 23332 2 2337899999
Q ss_pred EEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCC--CeeecC-CcHHHHHHH
Q 000968 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGA--TAVVPE-TLEPSLQLA 1136 (1207)
Q Consensus 1078 Viatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGA--d~VI~p-~~eaal~La 1136 (1207)
|++.+.+ ..|. .++..+++..|+..+++ ..++-.. ..+ +..|. ..||-- +..-..++-
T Consensus 79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~~k~~~~p~~rviG~gt~lD~~r~~ 157 (317)
T 3d0o_A 79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV-ATNPVDILAYATWKFSGLPKERVIGSGTILDSARFR 157 (317)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHhCCCHHHEEecCccccHHHHH
Confidence 9998654 2333 34456677799988888 5565432 223 33343 367644 443344555
Q ss_pred HHHHHHcCCCH
Q 000968 1137 AAVLAQAKLPA 1147 (1207)
Q Consensus 1137 ~~iL~~lg~~~ 1147 (1207)
..+-+.+++++
T Consensus 158 ~~la~~l~v~~ 168 (317)
T 3d0o_A 158 LLLSEAFDVAP 168 (317)
T ss_dssp HHHHHHHTSCG
T ss_pred HHHHHHhCcCh
Confidence 55555554443
No 185
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=88.45 E-value=1.1 Score=50.52 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=81.6
Q ss_pred cccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|+|.+|+..++.|.+. +..++ +.|.|+++.+... ..|.+.++.|. .+.|.. .++|+|++++++...
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~--~~ll~~---~~~D~V~i~tp~~~h- 77 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDP--HELIED---PNVDAVLVCSSTNTH- 77 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSH--HHHHHC---TTCCEEEECSCGGGH-
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCH--HHHhcC---CCCCEEEEcCCCcch-
Confidence 588999999999999999874 55665 6799999887654 44666555433 344442 478999999988643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|....+ ...+....+-++.++.
T Consensus 78 ~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 138 (344)
T 3ezy_A 78 SELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVE 138 (344)
T ss_dssp HHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHH
Confidence 34444444444 467776 5666665555 445766555 4445566666666665
No 186
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=88.39 E-value=4.6 Score=38.16 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=62.3
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcC--ccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVG--AERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~Ag--I~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
..++++|.|+...+.+ ...|+.++... +-.+.+.... -...+.|++-..-+. .-+.++..+|+.+|++++|+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 82 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTAS-SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVII 82 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeC-CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 3567777776654433 34565554322 2334444443 357888888776543 44678888999999999988
Q ss_pred eeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.+... +......++|++.++...+
T Consensus 83 ls~~~~~~~~~~~~~~g~~~~l~kp~ 108 (143)
T 3jte_A 83 LTGHGDLDNAILAMKEGAFEYLRKPV 108 (143)
T ss_dssp EECTTCHHHHHHHHHTTCSEEEESSC
T ss_pred EECCCCHHHHHHHHHhCcceeEeCCC
Confidence 87754 4577788999998875543
No 187
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.39 E-value=0.49 Score=49.20 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=49.5
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-C-----CCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-D-----LPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g-----~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
++.|+| .|.+|+.+++.|.+.|++++++|+++++.+.+.+. + ..+.. .+ +.++ ++++|.|+.+++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~-~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG---MK---NEDA-AEACDIAVLTIPW 74 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE---EE---HHHH-HHHCSEEEECSCH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh---hh---HHHH-HhcCCEEEEeCCh
Confidence 467899 99999999999999999999999999887765432 2 11221 12 2221 3578999999986
Q ss_pred cc
Q 000968 1084 PG 1085 (1207)
Q Consensus 1084 d~ 1085 (1207)
+.
T Consensus 75 ~~ 76 (212)
T 1jay_A 75 EH 76 (212)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 188
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.33 E-value=0.4 Score=53.89 Aligned_cols=72 Identities=18% Similarity=0.062 Sum_probs=57.5
Q ss_pred cccccC-CCchHHHHHHHHHh--cCCCeEeecCChH-------------HHHhhhhCCCCEEEecCCCHHHHHhcCcccc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSE--RLIPFVALDVRSD-------------RVAIGRALDLPVYFGDAGSREVLHKVGAERA 1074 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~--~gi~vvVID~D~e-------------~ve~~r~~g~~vi~GDatd~evL~~AgI~~A 1074 (1207)
+++|.| .|-+|+.+++.|.+ .|..|+++++++. ........+..++.||.++++.++++...+.
T Consensus 12 ~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 91 (362)
T 3sxp_A 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHF 91 (362)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCC
T ss_pred EEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCC
Confidence 577775 59999999999999 8999999998654 1122234467899999999999999877789
Q ss_pred CEEEEecC
Q 000968 1075 CAAAITLD 1082 (1207)
Q Consensus 1075 ~~VViatd 1082 (1207)
|.||-+..
T Consensus 92 D~vih~A~ 99 (362)
T 3sxp_A 92 DYLFHQAA 99 (362)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99886654
No 189
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.23 E-value=0.35 Score=55.50 Aligned_cols=90 Identities=13% Similarity=0.060 Sum_probs=61.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh--
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N-- 1087 (1207)
..+-|+|+|++|+.+++.|...|.++++.|+++...+.....|...+ .+.+-+ +.++|.|+++++....+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~el----l~~aDvV~l~~Plt~~t~~ 236 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV----EDLNEM----LPKCDVIVINMPLTEKTRG 236 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC----SCHHHH----GGGCSEEEECSCCCTTTTT
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc----CCHHHH----HhcCCEEEECCCCCHHHHH
Confidence 35889999999999999999999999999988755555555554321 222222 46789999998864333
Q ss_pred HHHHHHHHHhCCCceEEEee
Q 000968 1088 YRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa 1107 (1207)
+.-...++.+-|+..+|=.+
T Consensus 237 li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 237 MFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp CBSHHHHHHSCTTEEEEECS
T ss_pred hhcHHHHhcCCCCCEEEECc
Confidence 22234455666775444433
No 190
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=88.19 E-value=0.64 Score=51.94 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=65.6
Q ss_pred ccccccCCCchHHHHHHHHHh-cCCCeE-eecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSE-RLIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~-~gi~vv-VID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
-++.|+|+|.+|+.+++.|.+ .+.+++ +.|.|+++.+. .|++ +.+.. -+.+. .++|+|++++++.. .
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~--~~~~~---~l~~~--~~~DvViiatp~~~-h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQP--FRVVS---DIEQL--ESVDVALVCSPSRE-V 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTT--SCEES---SGGGS--SSCCEEEECSCHHH-H
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCC--cCCHH---HHHhC--CCCCEEEECCCchh-h
Confidence 468899999999999999987 456666 68999887654 4544 11222 22223 78999999998753 3
Q ss_pred HHHHHHHHHhCCCceEEEee----CChHHHH----HHHhCCCCeeecCCcHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVRA----HDIDHGL----NLEKAGATAVVPETLEPSLQLAAAVL 1140 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa----~d~~~~~----~L~~aGAd~VI~p~~eaal~La~~iL 1140 (1207)
...+..+.+. ..++++.. .+.++.. ..++.|....+...+..+..-+...+
T Consensus 79 ~~~~~~al~a--G~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i 137 (304)
T 3bio_A 79 ERTALEILKK--GICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTL 137 (304)
T ss_dssp HHHHHHHHTT--TCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHH
T ss_pred HHHHHHHHHc--CCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHH
Confidence 4444444444 34677652 2333333 33556765445444444444444444
No 191
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.14 E-value=2.1 Score=47.89 Aligned_cols=128 Identities=16% Similarity=0.195 Sum_probs=77.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhh----hh------CCCCEEE-ecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYF-GDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~----r~------~g~~vi~-GDatd~evL~~AgI~~A~~V 1077 (1207)
.++.|+|.|.+|..++..|...|. +++++|.|+++.+.. .. ....+.. +| + ..+..||.|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~--~a~~~aD~V 74 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y--ADTANSDVI 74 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G--GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H--HHHCCCCEE
Confidence 368999999999999999998886 899999998766431 11 1223333 22 1 236789999
Q ss_pred EEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHH-HHHHHh-CC--CCeeecC-CcHHHHHHHH
Q 000968 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK-AG--ATAVVPE-TLEPSLQLAA 1137 (1207)
Q Consensus 1078 Viatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~-~~~L~~-aG--Ad~VI~p-~~eaal~La~ 1137 (1207)
|++.+.+ ..|. .++..+++..|+..++.-++-.+. ...+.+ .| ...|+-- +..-..++-.
T Consensus 75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~~~~~rviG~gt~LD~~r~~~ 154 (309)
T 1ur5_A 75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRT 154 (309)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcCCCHHHEEECCcchHHHHHHH
Confidence 9997544 2332 445566777898777665443332 222323 23 3366644 4332334444
Q ss_pred HHHHHcCC
Q 000968 1138 AVLAQAKL 1145 (1207)
Q Consensus 1138 ~iL~~lg~ 1145 (1207)
.+-+.+++
T Consensus 155 ~la~~lgv 162 (309)
T 1ur5_A 155 FIAMEAGV 162 (309)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCC
Confidence 44444433
No 192
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.13 E-value=1.9 Score=48.83 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=78.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhh----hh------CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~----r~------~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++..|...|+ +++++|.|+++++.. .. ....+.. . +| + ..+..||.||
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t-~d---~--~al~~aD~VI 87 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-E-NN---Y--EYLQNSDVVI 87 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-E-SC---G--GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-C-CC---H--HHHCCCCEEE
Confidence 479999999999999999999998 999999999877632 11 1122322 1 12 1 2368899999
Q ss_pred EecCCcc-----------hhHH----HHHHHHHhCCCceEEEeeCChHHH-HHHHhC---CCCeeecC-CcHHHHHHHHH
Q 000968 1079 ITLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDIDHG-LNLEKA---GATAVVPE-TLEPSLQLAAA 1138 (1207)
Q Consensus 1079 iatddd~-----------~Ni~----i~l~aR~l~P~i~IIaRa~d~~~~-~~L~~a---GAd~VI~p-~~eaal~La~~ 1138 (1207)
++.+.+. .|.. ++..+.+..|+..++.-++..+.. ..+.+. -.+.|+-- +..-+.++-..
T Consensus 88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~~t~Ld~~R~~~~ 167 (328)
T 2hjr_A 88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMSGVLDSARFRCN 167 (328)
T ss_dssp ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEESCHHHHHHHHHHH
T ss_pred EcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEeCcHHHHHHHHHH
Confidence 9984432 2433 445666778997766655543322 222222 35566644 23333334444
Q ss_pred HHHHcCCC
Q 000968 1139 VLAQAKLP 1146 (1207)
Q Consensus 1139 iL~~lg~~ 1146 (1207)
+-+.++++
T Consensus 168 la~~lgv~ 175 (328)
T 2hjr_A 168 LSRALGVK 175 (328)
T ss_dssp HHHHHTSC
T ss_pred HHHHhCCC
Confidence 44444443
No 193
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.10 E-value=0.46 Score=53.60 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=52.6
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEec---------CCCHHHHHhcCccccCEEEEec
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD---------AGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GD---------atd~evL~~AgI~~A~~VViat 1081 (1207)
++.|+|.|.+|..++..|.+.|.+|++++++ ++.+.+++.|..+...+ .++++. +..+|.||+++
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~D~Vilav 78 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-----LGEQDVVIVAV 78 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-----HCCCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-----cCCCCEEEEeC
Confidence 6889999999999999999999999999986 67777777776554211 123332 36799999999
Q ss_pred CCc
Q 000968 1082 DTP 1084 (1207)
Q Consensus 1082 ddd 1084 (1207)
...
T Consensus 79 k~~ 81 (335)
T 3ghy_A 79 KAP 81 (335)
T ss_dssp CHH
T ss_pred Cch
Confidence 774
No 194
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.08 E-value=1.8 Score=48.47 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=66.2
Q ss_pred cccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
..+|+|+|.|..|..+++.|...|+ .++++|.|.=....+.+. ++.. ..+.+ ...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq----~~~~---------~diG~-----------~Ka 91 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRL----FFQP---------HQAGL-----------SKV 91 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------------------CCTTS-----------BHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccc----cCCh---------hhcCc-----------hHH
Confidence 4689999999999999999999997 688898875333322111 1110 11111 122
Q ss_pred HHHHHHHHHhCCCceEEEeeCCh---HHHHHHHh----------CCCCeeecC-CcHHHHHHHHHHHHHcCC
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDI---DHGLNLEK----------AGATAVVPE-TLEPSLQLAAAVLAQAKL 1145 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~----------aGAd~VI~p-~~eaal~La~~iL~~lg~ 1145 (1207)
......++++||++++.+...+. +..+.+.+ .+.|.||.- ....++...+......+.
T Consensus 92 ~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~ 163 (292)
T 3h8v_A 92 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQ 163 (292)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCC
Confidence 34566788999999998876554 33333322 589999943 223333444444433333
No 195
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.08 E-value=0.88 Score=52.18 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=74.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+.|+|.|..|+.+++.+++.|++++++|.+++... ...-...+.++..|.+.+.+.. ++++.+.... +..+..
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~--~~~ad~~~~~~~~d~~~l~~~~-~~~dvI~~~~--e~~~~~ 89 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPC--AQVADIEIVASYDDLKAIQHLA-EISDVVTYEF--ENIDYR 89 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTT--TTTCSEEEECCTTCHHHHHHHH-HTCSEEEESC--CCCCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCch--HHhCCceEecCcCCHHHHHHHH-HhCCEeeecc--ccccHH
Confidence 4689999999999999999999999999998865321 1112246678888988876654 5577764333 334444
Q ss_pred HHHHHHH---hCCCceEEEeeCChHHHH-HHHhCCCC
Q 000968 1090 TVWALSK---YFPNVKTFVRAHDIDHGL-NLEKAGAT 1122 (1207)
Q Consensus 1090 i~l~aR~---l~P~i~IIaRa~d~~~~~-~L~~aGAd 1122 (1207)
.+..+.+ ..|+...+..+.|..... .++++|+.
T Consensus 90 ~~~~l~~~g~~~~~~~~~~~~~dK~~~k~~l~~~Gip 126 (389)
T 3q2o_A 90 CLQWLEKHAYLPQGSQLLSKTQNRFTEKNAIEKAGLP 126 (389)
T ss_dssp HHHHHHHHSCCTTCSHHHHHTTSHHHHHHHHHHTTCC
T ss_pred HHHHHHhhCccCCCHHHHHHhcCHHHHHHHHHHCCCC
Confidence 4444433 346667777777776444 67888855
No 196
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=88.02 E-value=4.2 Score=38.60 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEec-CCCHHHHHhcCccccCEEEEecCCcch-hHHHHHHHHH--hCCCceE
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGD-AGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSK--YFPNVKT 1103 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GD-atd~evL~~AgI~~A~~VViatddd~~-Ni~i~l~aR~--l~P~i~I 1103 (1207)
...+.++|.|+...+.+ +..|+.+.... .+-.+.++...-...+.+++-..-+.. -+..+..+|+ .+|++++
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPI 84 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCE
Confidence 34677788777654433 34566532222 233456666666778888887665543 4677788888 6788899
Q ss_pred EEeeCC--hHHHHHHHhCCCCeeecCC
Q 000968 1104 FVRAHD--IDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1104 IaRa~d--~~~~~~L~~aGAd~VI~p~ 1128 (1207)
|+-+.. .+......++|++.++...
T Consensus 85 i~~s~~~~~~~~~~~~~~ga~~~l~Kp 111 (144)
T 3kht_A 85 VILTDNVSDDRAKQCMAAGASSVVDKS 111 (144)
T ss_dssp EEEETTCCHHHHHHHHHTTCSEEEECC
T ss_pred EEEeCCCCHHHHHHHHHcCCCEEEECC
Confidence 888754 6677788899999988554
No 197
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.02 E-value=3.1 Score=46.92 Aligned_cols=128 Identities=21% Similarity=0.157 Sum_probs=79.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHh-h---hh-----CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI-G---RA-----LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~-~---r~-----~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++-.|...+. .++++|.|+++.+- . .. .... +.+| + ...+..||.||
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-v~~~--~-----~~a~~~aDvVi 77 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKK-IYSG--E-----YSDCKDADLVV 77 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCE-EEEC--C-----GGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeE-EEEC--C-----HHHhCCCCEEE
Confidence 479999999999999999988776 79999999987753 1 11 1222 3332 2 22378999999
Q ss_pred EecCCcc-----------hhHH----HHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCC--CeeecC-CcHHHHHHHH
Q 000968 1079 ITLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGA--TAVVPE-TLEPSLQLAA 1137 (1207)
Q Consensus 1079 iatddd~-----------~Ni~----i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGA--d~VI~p-~~eaal~La~ 1137 (1207)
++.+.+. .|.. ++..+++.+|+..+++- .++-+. ..+ +..|. ..||-- +..-..++-.
T Consensus 78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~ 156 (318)
T 1ez4_A 78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA-ANPVDILTYATWKFSGFPKERVIGSGTSLDSSRLRV 156 (318)
T ss_dssp ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC-SSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe-CCcHHHHHHHHHHHcCCCHHHEEeccccchHHHHHH
Confidence 9986541 3433 44566778999888884 565432 223 23343 367644 4433445555
Q ss_pred HHHHHcCCC
Q 000968 1138 AVLAQAKLP 1146 (1207)
Q Consensus 1138 ~iL~~lg~~ 1146 (1207)
.+-+.++++
T Consensus 157 ~la~~lgv~ 165 (318)
T 1ez4_A 157 ALGKQFNVD 165 (318)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHhCcC
Confidence 554444443
No 198
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.00 E-value=1.1 Score=48.01 Aligned_cols=84 Identities=12% Similarity=0.119 Sum_probs=54.1
Q ss_pred cccccCCCchHHHHHHHHHhcC----CCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL----IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g----i~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|.|.+|..++..|.+.| .+++++|+++++ .|..+ ..+.+-. ++++|.|+++++.+ .
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~----~~~~~~~----~~~~D~vi~~v~~~-~ 70 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNY----MSSNEEL----ARHCDIIVCAVKPD-I 70 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEE----CSCHHHH----HHHCSEEEECSCTT-T
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEE----eCCHHHH----HhcCCEEEEEeCHH-H
Confidence 5889999999999999999988 689999998876 24322 1222211 24688999998854 3
Q ss_pred hHHHHHHHHHhCCCceEEEeeCC
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
...++..++...++..++.-...
T Consensus 71 ~~~v~~~l~~~l~~~~vv~~~~g 93 (262)
T 2rcy_A 71 AGSVLNNIKPYLSSKLLISICGG 93 (262)
T ss_dssp HHHHHHHSGGGCTTCEEEECCSS
T ss_pred HHHHHHHHHHhcCCCEEEEECCC
Confidence 33333334433344344444433
No 199
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=87.88 E-value=3.9 Score=37.31 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=63.8
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-hHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ ...|+.++.--.+-.+.+....-.+.+.+++-..-+.. -...+..+|+.+|++++++.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS 82 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe
Confidence 4577788777654333 34577654333333555655555567888887765543 366778888889998888877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......++|++..+...+
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP~ 106 (120)
T 1tmy_A 83 AMGQQAMVIEAIKAGAKDFIVKPF 106 (120)
T ss_dssp CTTCHHHHHHHHHTTCCEEEESSC
T ss_pred CCCCHHHHHHHHHhCcceeEeCCC
Confidence 64 45567778899998875443
No 200
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.84 E-value=0.69 Score=54.82 Aligned_cols=73 Identities=26% Similarity=0.377 Sum_probs=51.8
Q ss_pred cccccCCCchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHh-------------cCccccC
Q 000968 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK-------------VGAERAC 1075 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~-------------AgI~~A~ 1075 (1207)
++.|+|.|.+|..++..|.+. |++|+++|.|+++++.+++.+.+++. +.-.+.+.+ .-+.+||
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e--~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYE--PGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCC--TTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCC--CCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 588999999999999999998 89999999999999887654433321 000111110 1135789
Q ss_pred EEEEecCCcc
Q 000968 1076 AAAITLDTPG 1085 (1207)
Q Consensus 1076 ~VViatddd~ 1085 (1207)
.|+++++++.
T Consensus 85 vViiaVptp~ 94 (467)
T 2q3e_A 85 LVFISVNTPT 94 (467)
T ss_dssp EEEECCCCCB
T ss_pred EEEEEcCCch
Confidence 9999987654
No 201
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=87.75 E-value=3.3 Score=38.82 Aligned_cols=95 Identities=8% Similarity=0.031 Sum_probs=60.8
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC------cchhHHHHHHHHHhCCCce
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDT------PGANYRTVWALSKYFPNVK 1102 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd------d~~Ni~i~l~aR~l~P~i~ 1102 (1207)
..++++|.|+...+.+ +..|+.+.. -.+-.+.+....-...+.+++-..- +......+..+|+.+|+++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 82 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSKVIT-LSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLP 82 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSEEEE-ECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcEEEE-eCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCC
Confidence 4567777776654433 334665542 2223445554444567888776654 3345678888899999999
Q ss_pred EEEeeCCh--HHHHHHHhCCCCeeecCC
Q 000968 1103 TFVRAHDI--DHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1103 IIaRa~d~--~~~~~L~~aGAd~VI~p~ 1128 (1207)
+|+-+... +......++|++.++...
T Consensus 83 ii~ls~~~~~~~~~~~~~~g~~~~l~kp 110 (140)
T 2qr3_A 83 VVLFTAYADIDLAVRGIKEGASDFVVKP 110 (140)
T ss_dssp EEEEEEGGGHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCCHHHHHHHHHcCchheeeCC
Confidence 88877554 466777889999888543
No 202
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.68 E-value=0.96 Score=49.47 Aligned_cols=131 Identities=9% Similarity=0.014 Sum_probs=76.6
Q ss_pred cccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc----
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG---- 1085 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~---- 1085 (1207)
+++|+|.|.+|+.++..|.+.|. +++++++++++.+.+.+. +..+ .. +.+.+ -+.++|.||.+++...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~-~~~~--~~---~~~~~-~~~~aDiVInatp~gm~p~~ 182 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP-VKIF--SL---DQLDE-VVKKAKSLFNTTSVGMKGEE 182 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS-CEEE--EG---GGHHH-HHHTCSEEEECSSTTTTSCC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-cccC--CH---HHHHh-hhcCCCEEEECCCCCCCCCC
Confidence 89999999999999999999998 899999999998877543 2211 11 22222 2567899998885421
Q ss_pred hhHHHHHHHHHhCCCceEEEeeC-ChHHHHHHHhCCCCeeecCCcHHHHHHHHHHHHHcCCCHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVRAH-DIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEIAA 1152 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaRa~-d~~~~~~L~~aGAd~VI~p~~eaal~La~~iL~~lg~~~~ei~~ 1152 (1207)
..+ ....+.|+.-++=-+. .....+..++.|+..+++-.--.-.+-+...-...|.+++...+
T Consensus 183 ~~i----~~~~l~~~~~V~Divy~~T~ll~~A~~~G~~~~~~Gl~MLv~Qa~~af~~wtg~~~~~~~~ 246 (253)
T 3u62_A 183 LPV----SDDSLKNLSLVYDVIYFDTPLVVKARKLGVKHIIKGNLMFYYQAMENLKIWGIYDEEVFKE 246 (253)
T ss_dssp CSC----CHHHHTTCSEEEECSSSCCHHHHHHHHHTCSEEECTHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCC----CHHHhCcCCEEEEeeCCCcHHHHHHHHCCCcEEECCHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 111 0112344433333333 34455666778976455332212222222222344777754443
No 203
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=87.68 E-value=3.6 Score=39.60 Aligned_cols=97 Identities=12% Similarity=0.084 Sum_probs=64.5
Q ss_pred CCCeEeecCChHHHHhh----hh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEE
Q 000968 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
...++++|.|+...+.+ .. .|+.++.--.+-.+.+....-...+.+++-.+-+. .-...+..+|+.+|++++|+
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILI 84 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEE
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 35678888887655433 23 45555523333345555555566888888665443 44678888999999999888
Q ss_pred eeCC--hHHHHHHHhCCCCeeecCC
Q 000968 1106 RAHD--IDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1106 Ra~d--~~~~~~L~~aGAd~VI~p~ 1128 (1207)
.+.. .+......++|++.++...
T Consensus 85 ls~~~~~~~~~~~~~~g~~~~l~kp 109 (153)
T 3cz5_A 85 FTMHQGSAFALKAFEAGASGYVTKS 109 (153)
T ss_dssp EESCCSHHHHHHHHHTTCSEEEETT
T ss_pred EECCCCHHHHHHHHHCCCcEEEecC
Confidence 7754 4667778899999887443
No 204
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=87.66 E-value=0.57 Score=52.81 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=58.5
Q ss_pred ccccccC-CCchHHHHHHHHHhc-CC-CeEeecCChHHHHhhh----hCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSER-LI-PFVALDVRSDRVAIGR----ALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~-gi-~vvVID~D~e~ve~~r----~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
..++|.| .|.+|+.+++.|.+. |. .|+++++++...+.+. ..++.++.||.+|++.+.++ ++..|+||-+..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~D~Vih~Aa 100 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA-LEGVDICIHAAA 100 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH-HhcCCEEEECCC
Confidence 3577777 599999999999998 97 9999999988765443 24788999999999988776 357899887764
No 205
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.56 E-value=0.58 Score=55.20 Aligned_cols=71 Identities=24% Similarity=0.195 Sum_probs=51.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHH------------hcCccccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLH------------KVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~------------~AgI~~A~~VV 1078 (1207)
++.|+|.|.+|..++..|.+ |++|+++|.|+++++.+++...+++. +.-++.+. +..+.+||.|+
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e--~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi 114 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVD--KEIQEYLAEKPLNFRATTDKHDAYRNADYVI 114 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCC--HHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred EEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCcccc--ccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence 68899999999999999988 99999999999999988654322210 00001111 01245789999
Q ss_pred EecCCc
Q 000968 1079 ITLDTP 1084 (1207)
Q Consensus 1079 iatddd 1084 (1207)
++++.+
T Consensus 115 iaVPt~ 120 (432)
T 3pid_A 115 IATPTD 120 (432)
T ss_dssp ECCCCE
T ss_pred EeCCCc
Confidence 999886
No 206
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=87.48 E-value=2.2 Score=40.32 Aligned_cols=60 Identities=32% Similarity=0.367 Sum_probs=45.9
Q ss_pred HHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-------HHhhhHHHHHHH
Q 000968 270 LLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQM-------NALKAEEDVANI 329 (1207)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~-------~a~~a~~~~~~~ 329 (1207)
...++.++++........|.++..+|.|..-++.++++.++-+..++- .+.+||.+|+++
T Consensus 25 ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasL 91 (101)
T 3u59_A 25 AEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777888888999999999999999999987777766654 456677777764
No 207
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=87.35 E-value=5.2 Score=37.49 Aligned_cols=98 Identities=7% Similarity=0.014 Sum_probs=61.4
Q ss_pred CCCeEeecCChHHHHhh----hh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHH--hCCCceE
Q 000968 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKT 1103 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~--l~P~i~I 1103 (1207)
...+.++|.|+...+.+ .. .|+.++.--.+-.+.+....-...+.+++-..-+. .-...+..+|+ .+|++++
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~i 87 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIV 87 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEE
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcE
Confidence 34567777776544322 33 56663333233344555444456788888776543 34677788888 6788998
Q ss_pred EEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1104 FVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1104 IaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
|+.+.. .+......++|++.++...+
T Consensus 88 i~~s~~~~~~~~~~~~~~g~~~~l~kP~ 115 (143)
T 3cnb_A 88 IAMTGALTDDNVSRIVALGAETCFGKPL 115 (143)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred EEEeCCCCHHHHHHHHhcCCcEEEeCCC
Confidence 887764 44557778999998885443
No 208
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.34 E-value=0.7 Score=51.65 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=56.4
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChH----HHHhhh-------hCCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD----RVAIGR-------ALDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e----~ve~~r-------~~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
+++|.|. |.+|+.+++.|.+.|.+|+++++++. ..+.+. ..++.++.||.++++.+.++ ++++|.||
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 107 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA-CAGVDYVL 107 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH-HTTCSEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH-hcCCCEEE
Confidence 5888887 99999999999999999999998653 333221 25778999999999988765 35789988
Q ss_pred EecC
Q 000968 1079 ITLD 1082 (1207)
Q Consensus 1079 iatd 1082 (1207)
-+..
T Consensus 108 h~A~ 111 (352)
T 1sb8_A 108 HQAA 111 (352)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 8765
No 209
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=87.31 E-value=0.4 Score=54.05 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=57.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.+++++|++++.. .....|... .+-.+.+ .++|.|+++++....+..
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~----~~l~ell-----~~aDvVvl~~P~~~~t~~ 212 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA----VSLEELL-----KNSDVISLHVTVSKDAKP 212 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE----CCHHHHH-----HHCSEEEECCCCCTTSCC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee----cCHHHHH-----hhCCEEEEeccCChHHHH
Confidence 358899999999999999999999999999998764 345556542 1222333 478999999886543211
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ......+.|+..+|
T Consensus 213 li~~~~l~~mk~ga~lI 229 (313)
T 2ekl_A 213 IIDYPQFELMKDNVIIV 229 (313)
T ss_dssp SBCHHHHHHSCTTEEEE
T ss_pred hhCHHHHhcCCCCCEEE
Confidence 1 12344556664444
No 210
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.28 E-value=0.56 Score=53.25 Aligned_cols=85 Identities=16% Similarity=0.158 Sum_probs=57.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.+++++|++++. +.....|..+ .+.+.+ +.++|.|+++++....+..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~~~----l~~aDvVil~vp~~~~t~~ 220 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-----KPLEDL----LRESDFVVLAVPLTRETYH 220 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-----CCHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-----CCHHHH----HhhCCEEEECCCCChHHHH
Confidence 35889999999999999999999999999999877 5444445421 233222 2478999999877653221
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ......+.|+..+|
T Consensus 221 ~i~~~~~~~mk~~ailI 237 (334)
T 2dbq_A 221 LINEERLKLMKKTAILI 237 (334)
T ss_dssp CBCHHHHHHSCTTCEEE
T ss_pred hhCHHHHhcCCCCcEEE
Confidence 1 12344455664443
No 211
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.26 E-value=0.45 Score=55.65 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=76.5
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
...+.|+|.|..|+.+++.+++.|+.++++|.+++...... .-.++.+|..|.+.|.+.- +++|+|+....+ .+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~a-~~~D~V~~~~e~--~~~ 109 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV--ADRHLRAAYDDEAALAELA-GLCEAVSTEFEN--VPA 109 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH--SSEEECCCTTCHHHHHHHH-HHCSEEEECCTT--CCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh--CCEEEECCcCCHHHHHHHH-hcCCEEEEccCc--CCH
Confidence 35689999999999999999999999999998876432211 2246779999999887775 788987754443 333
Q ss_pred HHHHHHHH---hCCCceEEEeeCChHH-HHHHHhCCCC
Q 000968 1089 RTVWALSK---YFPNVKTFVRAHDIDH-GLNLEKAGAT 1122 (1207)
Q Consensus 1089 ~i~l~aR~---l~P~i~IIaRa~d~~~-~~~L~~aGAd 1122 (1207)
..+..+.+ .+|+...+..+.|... ...++++|+.
T Consensus 110 ~~~~~l~~~~~vgp~~~a~~~~~dK~~~k~~l~~~Gip 147 (419)
T 4e4t_A 110 ASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVP 147 (419)
T ss_dssp HHHHHHHTTSEESSCHHHHHHHTCHHHHHHHHHHTTCC
T ss_pred HHHHHHHccCCcCCCHHHHHHhcCHHHHHHHHHHcCcC
Confidence 33333332 3466666667777654 4456788865
No 212
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.21 E-value=0.52 Score=50.71 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=55.4
Q ss_pred ccccccCC-Cc-hHHHHHHHHHhcCCCeEeecCChHHHHhhh----h---CCCCEEEecCCCHHHHHhcC------cccc
Q 000968 1010 DHIILCGF-GR-VGQIIAQLLSERLIPFVALDVRSDRVAIGR----A---LDLPVYFGDAGSREVLHKVG------AERA 1074 (1207)
Q Consensus 1010 ~hVIIiG~-Gr-vG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~---~g~~vi~GDatd~evL~~Ag------I~~A 1074 (1207)
..++|.|. |+ +|+.+++.|.+.|..+++++++++..+... . ..+.++.+|.+|++-++++= ..+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 45888898 74 999999999999999999999988765432 2 25678899999998776541 1255
Q ss_pred CEEEEecC
Q 000968 1075 CAAAITLD 1082 (1207)
Q Consensus 1075 ~~VViatd 1082 (1207)
|.+|-...
T Consensus 103 d~li~~Ag 110 (266)
T 3o38_A 103 DVLVNNAG 110 (266)
T ss_dssp CEEEECCC
T ss_pred cEEEECCC
Confidence 77776554
No 213
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.17 E-value=1.7 Score=48.03 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=35.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIG 1048 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~ 1048 (1207)
.+|.|+|.|.+|..++..|...|++|+++|.++++++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 468999999999999999999999999999999987754
No 214
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.16 E-value=3.3 Score=46.50 Aligned_cols=130 Identities=14% Similarity=0.087 Sum_probs=80.2
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh----hh-C-----CCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RA-L-----DLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~----r~-~-----g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
.++.|+|.|.+|..++..|...+. +++++|.|+++.+-. .. . ...+. .+ +. ..+..||.|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~-----~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DY-----DDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CG-----GGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cH-----HHhCCCCEE
Confidence 479999999999999999988775 799999998755421 11 1 12222 21 21 237899999
Q ss_pred EEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChH-HHHHHHh-CCC--CeeecC-CcHHHHHHHH
Q 000968 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDID-HGLNLEK-AGA--TAVVPE-TLEPSLQLAA 1137 (1207)
Q Consensus 1078 Viatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~-~~~~L~~-aGA--d~VI~p-~~eaal~La~ 1137 (1207)
|++.+-+ ..|. .++..+++..|+..+++-++-.+ ....+.+ .|. ..|+-- +..-..++-.
T Consensus 79 iia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~~~~s~~p~~rviG~gt~lD~~r~~~ 158 (316)
T 1ldn_A 79 VICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRF 158 (316)
T ss_dssp EECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHTCCGGGEEECTTHHHHHHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHHHhCCCHHHEEecccchHHHHHHH
Confidence 9996554 2332 34566777889987777544322 2222322 243 366644 4444455666
Q ss_pred HHHHHcCCCH
Q 000968 1138 AVLAQAKLPA 1147 (1207)
Q Consensus 1138 ~iL~~lg~~~ 1147 (1207)
.+-+.+++++
T Consensus 159 ~la~~l~v~~ 168 (316)
T 1ldn_A 159 LLGEYFSVAP 168 (316)
T ss_dssp HHHHHHTSCG
T ss_pred HHHHHhCCCH
Confidence 6666666665
No 215
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=87.15 E-value=0.91 Score=51.65 Aligned_cols=89 Identities=13% Similarity=0.057 Sum_probs=59.2
Q ss_pred cccc-cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1007 DLQD-HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1007 ~lk~-hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
.+.+ .+-|+|+|.+|+.+++.|+..|.++++.|++++.... ..|... - + |+++ +.++|.|++.++...
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~--~---~---l~el-l~~aDvV~l~~P~t~ 206 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVY--T---S---LDEL-LKESDVISLHVPYTK 206 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEE--C---C---HHHH-HHHCSEEEECCCCCT
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCcee--c---C---HHHH-HhhCCEEEEeCCCCh
Confidence 3443 5789999999999999999999999999998765532 334432 1 2 2222 357899999887643
Q ss_pred hh--HHHHHHHHHhCCCceEEEe
Q 000968 1086 AN--YRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1086 ~N--i~i~l~aR~l~P~i~IIaR 1106 (1207)
.+ +.-...+..+.|+..+|=.
T Consensus 207 ~t~~li~~~~l~~mk~gailIN~ 229 (334)
T 2pi1_A 207 ETHHMINEERISLMKDGVYLINT 229 (334)
T ss_dssp TTTTCBCHHHHHHSCTTEEEEEC
T ss_pred HHHHhhCHHHHhhCCCCcEEEEC
Confidence 33 2223445566676544433
No 216
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=87.12 E-value=1.1 Score=49.81 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=55.2
Q ss_pred cccccC-CCchHHHHHHHHHhc--CCCeEeecCChH-----HHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSER--LIPFVALDVRSD-----RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~--gi~vvVID~D~e-----~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
+++|.| .|.+|+.+++.|.+. |+.|+++++++. ..+.....++.++.||.+|++.+.++ ++.+|.||-+..
T Consensus 6 ~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~A~ 84 (348)
T 1oc2_A 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKL-AAKADAIVHYAA 84 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHH-HTTCSEEEECCS
T ss_pred EEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHH-hhcCCEEEECCc
Confidence 577887 699999999999998 889999988642 22222234678899999999988776 456788887764
Q ss_pred C
Q 000968 1083 T 1083 (1207)
Q Consensus 1083 d 1083 (1207)
.
T Consensus 85 ~ 85 (348)
T 1oc2_A 85 E 85 (348)
T ss_dssp C
T ss_pred c
Confidence 3
No 217
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.02 E-value=0.47 Score=54.65 Aligned_cols=89 Identities=15% Similarity=0.032 Sum_probs=58.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCC-eEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIP-FVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~-vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
..+-|+|+|++|+.+++.|...|.+ +++.|+++...+.....|.. . ..+.+.+. .++|.|+++++....+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~--~--~~~l~ell----~~aDvV~l~~P~t~~t~ 236 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGAR--R--VENIEELV----AQADIVTVNAPLHAGTK 236 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEE--E--CSSHHHHH----HTCSEEEECCCCSTTTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcE--e--cCCHHHHH----hcCCEEEECCCCChHHH
Confidence 3588999999999999999999998 99999887655555555532 1 12333222 37899999988753332
Q ss_pred HH--HHHHHHhCCCceEEEe
Q 000968 1089 RT--VWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1089 ~i--~l~aR~l~P~i~IIaR 1106 (1207)
.+ ......+.|+..+|-.
T Consensus 237 ~li~~~~l~~mk~ga~lIn~ 256 (364)
T 2j6i_A 237 GLINKELLSKFKKGAWLVNT 256 (364)
T ss_dssp TCBCHHHHTTSCTTEEEEEC
T ss_pred HHhCHHHHhhCCCCCEEEEC
Confidence 21 2234455566444433
No 218
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.99 E-value=0.93 Score=51.23 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=36.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR 1049 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r 1049 (1207)
.++-|+|.|.+|..++..|...|++|++.|.+++.++.++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4688999999999999999999999999999999887664
No 219
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=86.98 E-value=1.3 Score=48.88 Aligned_cols=119 Identities=18% Similarity=0.183 Sum_probs=75.4
Q ss_pred ccccccCCCchHHH-HHHHHHh-cCCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSE-RLIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~-~gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
-++.|+|+|.+|+. .++.|.+ .+..++ +.|.|+++.+... ..|.+. .++.+-+.+ +.|+|+++++++.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~----~~D~V~i~tp~~~ 78 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAK----KCDCIFLHSSTET 78 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHT----TCSEEEECCCGGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHh----cCCEEEEeCCcHh
Confidence 36889999999996 8888876 466666 7899999887664 446654 344444443 7899999998874
Q ss_pred hhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAV 1139 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~i 1139 (1207)
. ...+..+-+.+ .++++. +.+.++...+ ++.|....+ ...+..+.+-++..
T Consensus 79 h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~ 138 (308)
T 3uuw_A 79 H-YEIIKILLNLG--VHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEIKNN 138 (308)
T ss_dssp H-HHHHHHHHHTT--CEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHH
T ss_pred H-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHHHHHHHHH
Confidence 4 33444443443 357664 4455554444 445665555 33344444444443
No 220
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.86 E-value=1.9 Score=48.69 Aligned_cols=92 Identities=21% Similarity=0.255 Sum_probs=64.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHH----hhhh------CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA----IGRA------LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve----~~r~------~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.+ ....+. +. .+. ..+..||.||
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~-~t-~d~-----~a~~~aDvVI 78 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVR-GT-NDY-----KDLENSDVVI 78 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-EE-SCG-----GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEE-Ec-CCH-----HHHCCCCEEE
Confidence 468899999999999999998888 8999999998764 2221 123333 32 122 3567899999
Q ss_pred EecCCc-----------chhH----HHHHHHHHhCCCceEEEeeC
Q 000968 1079 ITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1079 iatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
++.+.+ ..|. .++..+++.+|+..+++-++
T Consensus 79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 997554 2353 34456778899987777654
No 221
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=86.84 E-value=6 Score=38.28 Aligned_cols=98 Identities=10% Similarity=0.051 Sum_probs=65.1
Q ss_pred cCCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-hHHHHHHHHHh--CCCceE
Q 000968 1031 RLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKY--FPNVKT 1103 (1207)
Q Consensus 1031 ~gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-Ni~i~l~aR~l--~P~i~I 1103 (1207)
....+.++|.|+...+.+ +..|+.+..- .+-.+.++...-...+.|++-..-+.. -+.++..+|+. +|++++
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEHLKHILEETGYQTEHV-RNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPV 84 (154)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCE
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCE
Confidence 345678888877655433 3456655432 234556666666778998887765543 46677778776 378888
Q ss_pred EEeeC--ChHHHHHHHhCCCCeeecCCc
Q 000968 1104 FVRAH--DIDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1104 IaRa~--d~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
|+-+. +.+......++|++.++..-+
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (154)
T 3gt7_A 85 ILLTILSDPRDVVRSLECGADDFITKPC 112 (154)
T ss_dssp EEEECCCSHHHHHHHHHHCCSEEEESSC
T ss_pred EEEECCCChHHHHHHHHCCCCEEEeCCC
Confidence 87774 556777888999998885443
No 222
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.83 E-value=0.72 Score=51.62 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=62.2
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEE---ecC--------CCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF---GDA--------GSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~---GDa--------td~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|.+.|.+|+++++++. +.+++.|+.+-. |+. +++ .++ .+.+|.|++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~---~~~-~~~~DlVil 77 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSA---AEL-ETKPDCTLL 77 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCG---GGC-SSCCSEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCH---HHc-CCCCCEEEE
Confidence 688999999999999999999999999999872 656655543321 211 122 122 247999999
Q ss_pred ecCCcchhHHHHHHHHH-hCCCceEEEeeCChHHHHHH
Q 000968 1080 TLDTPGANYRTVWALSK-YFPNVKTFVRAHDIDHGLNL 1116 (1207)
Q Consensus 1080 atddd~~Ni~i~l~aR~-l~P~i~IIaRa~d~~~~~~L 1116 (1207)
++.....- .++..++. ..|+..|+.-.+--...+.+
T Consensus 78 avK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l 114 (320)
T 3i83_A 78 CIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEV 114 (320)
T ss_dssp CCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHH
T ss_pred ecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHH
Confidence 99776432 23333333 34555555555544433333
No 223
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=86.82 E-value=0.96 Score=51.30 Aligned_cols=123 Identities=12% Similarity=0.010 Sum_probs=79.5
Q ss_pred ccccccCCCchHH-HHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQ-IIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~-~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
-++.|+|+|.+|+ ..++.|.+. +..++ +.|.|+++.+... ..|++.+ .| -.+.|.. .+.|+|+++++++.
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~~--~~~ll~~---~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-EG--YPALLER---DDVDAVYVPLPAVL 101 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-ES--HHHHHTC---TTCSEEEECCCGGG
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-CC--HHHHhcC---CCCCEEEECCCcHH
Confidence 4799999999998 788988876 66665 6799999887664 4577765 22 2333432 57899999998874
Q ss_pred hhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeeec--CCcHHHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVP--ETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI~--p~~eaal~La~~iL~ 1141 (1207)
. ...+..+-+.+ .++++. +.+.++...+ ++.|.-..+. ..+....+-++.++.
T Consensus 102 h-~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 163 (350)
T 3rc1_A 102 H-AEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLD 163 (350)
T ss_dssp H-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHH
T ss_pred H-HHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHh
Confidence 3 44444444444 457774 4566655554 4567665552 234455555555554
No 224
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=86.72 E-value=1.5 Score=48.75 Aligned_cols=119 Identities=20% Similarity=0.202 Sum_probs=74.4
Q ss_pred cccccCCCchHHH-HHHHHHh-cCCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQI-IAQLLSE-RLIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~-Ia~~L~~-~gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|+|.+|+. +++.|.+ .+..++ +.|.++++.+.+. ..|.+ + ..+.+.| ..++|+|+++++++..
T Consensus 7 ~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~-~---~~~~~~l----~~~~D~V~i~tp~~~h 78 (319)
T 1tlt_A 7 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-Y---ADSLSSL----AASCDAVFVHSSTASH 78 (319)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-B---CSSHHHH----HTTCSEEEECSCTTHH
T ss_pred eEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC-c---cCcHHHh----hcCCCEEEEeCCchhH
Confidence 6889999999996 8888875 356666 8899999877654 34665 2 2344545 3578999999987633
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVL 1140 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL 1140 (1207)
...+..+-+. ..++++. +.+.++...+ ++.|....+ ...+..+.+-++.++
T Consensus 79 -~~~~~~al~~--G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~k~~i 138 (319)
T 1tlt_A 79 -FDVVSTLLNA--GVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQL 138 (319)
T ss_dssp -HHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHHHHHHTTTG
T ss_pred -HHHHHHHHHc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHh
Confidence 3344444333 3467665 3455554444 456776655 333444444444443
No 225
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.67 E-value=0.4 Score=48.65 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=30.7
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e 1043 (1207)
.|+|||.|+.|...|..|.+.|++|+|+|.++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 489999999999999999999999999998754
No 226
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.58 E-value=0.97 Score=50.14 Aligned_cols=34 Identities=26% Similarity=0.537 Sum_probs=31.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChH
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e 1043 (1207)
.++.|+| .|.+|..++..|.+.|++++++|++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 4689999 999999999999999999999998875
No 227
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=86.57 E-value=2.5 Score=46.02 Aligned_cols=106 Identities=11% Similarity=0.120 Sum_probs=66.2
Q ss_pred cccccCC-CchHHHHHHHHHhc-CCCeE-eecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGF-GRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
+++|+|+ |++|+.+++.+... +.+++ ++|.+ .+.+.+.. ..+|.+|=.+ +++..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-------------------~dl~~~~~---~~~DvvIDfT-~p~a~ 58 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-------------------DPLSLLTD---GNTEVVIDFT-HPDVV 58 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-------------------CCTHHHHH---TTCCEEEECS-CTTTH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-------------------CCHHHHhc---cCCcEEEEcc-ChHHH
Confidence 4789995 99999999999765 67765 55543 12232322 3578776455 33344
Q ss_pred HHHHHHHHHhCCCceEEEee--CChHHHHHHHhC-----CCCeeecCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVRA--HDIDHGLNLEKA-----GATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa--~d~~~~~~L~~a-----GAd~VI~p~~eaal~La~~iL~ 1141 (1207)
...+..+.+.+ +++++-+ .+++....++++ ++-.++.|++--+..+...++.
T Consensus 59 ~~~~~~a~~~g--~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~ 117 (245)
T 1p9l_A 59 MGNLEFLIDNG--IHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAK 117 (245)
T ss_dssp HHHHHHHHHTT--CEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHH
Confidence 44444555554 3455533 455666666554 7777899998777666666664
No 228
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.47 E-value=0.44 Score=55.06 Aligned_cols=99 Identities=18% Similarity=0.075 Sum_probs=65.5
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEE---Eec------------C-C------CHHHH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVY---FGD------------A-G------SREVL 1066 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi---~GD------------a-t------d~evL 1066 (1207)
..+++|+|.|.+|+.+++.++..|..|+++|.++++.+.++..|..++ ..+ . + .++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l 251 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 251 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence 357999999999999999999999999999999988887777776554 111 0 0 12223
Q ss_pred HhcCccccCEEEEecCC---cchhHHHHHHHHHhCCCceEEEeeC
Q 000968 1067 HKVGAERACAAAITLDT---PGANYRTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1067 ~~AgI~~A~~VViatdd---d~~Ni~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
.+ -+..+|.||.++.. +...+.....++.+.|...++-...
T Consensus 252 ~~-~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 252 LK-ELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HH-HHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HH-HhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 32 23579999988822 2212222334556667766665553
No 229
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=86.47 E-value=1 Score=50.24 Aligned_cols=122 Identities=11% Similarity=0.029 Sum_probs=74.4
Q ss_pred cccccCCCchHHHH-HHHHHhcCCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHH-HHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQII-AQLLSERLIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSRE-VLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~I-a~~L~~~gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~e-vL~~AgI~~A~~VViatddd~~ 1086 (1207)
++.|+|+|.+|+.. ++.|.+.+..++ +.|.|+++.+.+. ..|.+.++ ++.+ .+.. .++|+|+++++++..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~---~~~~~~l~~---~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV---TSVEELVGD---PDVDAVYVSTTNELH 75 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB---SCHHHHHTC---TTCCEEEECSCGGGH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc---CCHHHHhcC---CCCCEEEEeCChhHh
Confidence 47799999999998 888877667765 6799999886654 44554222 2333 3332 468999999987643
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeeecC--CcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI~p--~~eaal~La~~iL~ 1141 (1207)
...+..+-+. ..++++. +.+.+....+ ++.|+...+.. .+..+..-+..++.
T Consensus 76 -~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (332)
T 2glx_A 76 -REQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIA 136 (332)
T ss_dssp -HHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHH
T ss_pred -HHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHH
Confidence 3333333333 3456664 3455554444 45577765532 33444555555554
No 230
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.42 E-value=0.45 Score=55.43 Aligned_cols=99 Identities=13% Similarity=0.012 Sum_probs=65.8
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCC-------------CHH-------HHHh
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAG-------------SRE-------VLHK 1068 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDat-------------d~e-------vL~~ 1068 (1207)
...++|+|.|.+|+.+++.+...|..|+++|.++++.+.+++.|..++.-|.. +.+ .+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999888777777655421211 111 2322
Q ss_pred cCccccCEEEEecCCc---chhHHHHHHHHHhCCCceEEEeeC
Q 000968 1069 VGAERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1069 AgI~~A~~VViatddd---~~Ni~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
-+..+|.||.++..+ ...+.....++.+.|...++-.+.
T Consensus 252 -~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 252 -QAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp -HHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred -HhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 234799999884221 212222344566677766666553
No 231
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.35 E-value=1.8 Score=49.05 Aligned_cols=91 Identities=22% Similarity=0.264 Sum_probs=64.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHH----hhhh------CCCCEEE-ecCCCHHHHHhcCccccCEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA----IGRA------LDLPVYF-GDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve----~~r~------~g~~vi~-GDatd~evL~~AgI~~A~~V 1077 (1207)
.++.|+|.|.+|..++..|...+. +++++|.++++++ .+.. ....+.. +| . ..+..||.|
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~-----~a~~~aDiV 79 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y-----AAIEGADVV 79 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G-----GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H-----HHHCCCCEE
Confidence 468999999999999999999888 9999999998764 1111 1333432 33 1 356889999
Q ss_pred EEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeC
Q 000968 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1078 Viatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
|++.+.+ ..|. .++..+++.+|+..+++-++
T Consensus 80 Iiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 80 IVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp EECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 9997643 2353 34456778899987666665
No 232
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=86.34 E-value=7.4 Score=37.42 Aligned_cols=96 Identities=14% Similarity=0.100 Sum_probs=65.8
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-..-+. .....+..+|+.+|++++|+.+
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls 82 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSS-FASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVT 82 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEE-ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 4577777777654333 345666553 334456666666677888888776543 4467788888889999998887
Q ss_pred CCh--HHHHHHHhCCCCeeecCCc
Q 000968 1108 HDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
... +......++|++.++...+
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~kP~ 106 (155)
T 1qkk_A 83 GHGDIPMAVQAIQDGAYDFIAKPF 106 (155)
T ss_dssp CGGGHHHHHHHHHTTCCEEEESSC
T ss_pred CCCChHHHHHHHhcCCCeEEeCCC
Confidence 654 4667778899999885543
No 233
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=86.27 E-value=0.74 Score=51.76 Aligned_cols=71 Identities=14% Similarity=0.226 Sum_probs=58.4
Q ss_pred ccccccC-CCchHHHHHHHHHhc-CCCeEeecCChHHHHhhh-hCCCCEEEecCC-CHHHHHhcCccccCEEEEec
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGR-ALDLPVYFGDAG-SREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~-gi~vvVID~D~e~ve~~r-~~g~~vi~GDat-d~evL~~AgI~~A~~VViat 1081 (1207)
.+++|.| .|-+|+.+++.|.+. |+.|++++++++....+. ..++.++.||.+ +++.+.++ ++++|.||-+.
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~-~~~~d~Vih~A 99 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH-VKKCDVILPLV 99 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH-HHHCSEEEECB
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH-hccCCEEEEcC
Confidence 4688888 599999999999998 999999999987765554 368999999999 88888754 34788888644
No 234
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.14 E-value=1.1 Score=52.90 Aligned_cols=75 Identities=23% Similarity=0.351 Sum_probs=53.4
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHh--------------cCcccc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK--------------VGAERA 1074 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~--------------AgI~~A 1074 (1207)
.-++-++|.|.+|..++..|.+.|++|+++|.|+++++.+.+...+.+ ++.-.+.+++ .-+.+|
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~--epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIY--EPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSC--CTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCcc--CCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 346789999999999999999999999999999999998876432221 1111111110 123578
Q ss_pred CEEEEecCCcc
Q 000968 1075 CAAAITLDTPG 1085 (1207)
Q Consensus 1075 ~~VViatddd~ 1085 (1207)
+.++++++++.
T Consensus 86 Dvvii~Vptp~ 96 (446)
T 4a7p_A 86 DAVFIAVGTPS 96 (446)
T ss_dssp SEEEECCCCCB
T ss_pred CEEEEEcCCCC
Confidence 99999976664
No 235
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=86.09 E-value=1.3 Score=49.89 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=57.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.+|++.|++++.. .+...+.|. ..|+++ +.++|.|++.++....+..
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~~~----~~l~el-l~~aDiV~l~~Plt~~t~~ 209 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW-----PGVESYVGR----EELRAF-LNQTRVLINLLPNTAQTVG 209 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC-----TTCEEEESH----HHHHHH-HHTCSEEEECCCCCGGGTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh-----hhhhhhccc----CCHHHH-HhhCCEEEEecCCchhhhh
Confidence 468899999999999999999999999999887642 233333332 333332 4678999999886543322
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ......+.|+..+|
T Consensus 210 li~~~~l~~mk~gailI 226 (315)
T 3pp8_A 210 IINSELLDQLPDGAYVL 226 (315)
T ss_dssp CBSHHHHTTSCTTEEEE
T ss_pred hccHHHHhhCCCCCEEE
Confidence 2 23445556664443
No 236
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=86.08 E-value=2.2 Score=47.93 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=77.2
Q ss_pred cccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|+|.+|+..++.|.+. +..++ +.|.|+++.+... ..|.+ ++ .+.+-+. .-.++|+|+++++++..
T Consensus 6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~---~~~~~~l--~~~~~D~V~i~tp~~~h- 78 (344)
T 3euw_A 6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV---ASPDEVF--ARDDIDGIVIGSPTSTH- 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE---SSHHHHT--TCSCCCEEEECSCGGGH-
T ss_pred EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee---CCHHHHh--cCCCCCEEEEeCCchhh-
Confidence 688999999999999999875 56666 7899999987654 44633 33 2333332 22578999999988643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.+....+ ++.|.-..+ ...+....+-++.++.
T Consensus 79 ~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (344)
T 3euw_A 79 VDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVA 139 (344)
T ss_dssp HHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHh
Confidence 34444444444 356663 4555555554 445654444 3344455666666665
No 237
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.02 E-value=4.8 Score=45.38 Aligned_cols=93 Identities=17% Similarity=0.181 Sum_probs=63.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCC--hHHHHhh----hh------CCCCEEEecCCCHHHHHhcCccccCE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVR--SDRVAIG----RA------LDLPVYFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D--~e~ve~~----r~------~g~~vi~GDatd~evL~~AgI~~A~~ 1076 (1207)
.++.|+|.|.+|..++..|...++ +++++|.+ +++.+-. .. ....+...+ + ...+..||.
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d-----~~a~~~aDv 81 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D-----YADTADSDV 81 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C-----GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C-----HHHhCCCCE
Confidence 579999999999999999999999 99999999 4443211 11 122333222 1 235789999
Q ss_pred EEEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCC
Q 000968 1077 AAITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1077 VViatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
||++.+.+ ..|. .++..+++.+|+..+++-++=
T Consensus 82 VIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 82 VVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 99997544 2343 344567788999876666543
No 238
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=85.93 E-value=3.6 Score=38.79 Aligned_cols=96 Identities=16% Similarity=0.100 Sum_probs=65.2
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc---hhHHHHHHHHHhCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG---ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~---~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
..+.++|.|+...+.+ +..|+.+..- .+-.+.+....-...+.+++-..-+. .-+..+..+|+.+|++++|+
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~ 85 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPLDVTIQCF-ASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIV 85 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSSEEEEE-SSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCcEEEEe-CCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEE
Confidence 4677788777655433 3456666532 23345566666667788887765544 34678888999999999888
Q ss_pred eeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
-+... +......++|++.++..-+
T Consensus 86 ~s~~~~~~~~~~~~~~ga~~~l~KP~ 111 (136)
T 3kto_A 86 MASSSDIPTAVRAMRASAADFIEKPF 111 (136)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEESSB
T ss_pred EEcCCCHHHHHHHHHcChHHheeCCC
Confidence 77654 4577778999998885544
No 239
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=85.88 E-value=3.9 Score=39.31 Aligned_cols=97 Identities=12% Similarity=-0.022 Sum_probs=63.0
Q ss_pred CCeEeecCChHHHHhhh----hCCC-CEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1033 IPFVALDVRSDRVAIGR----ALDL-PVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~r----~~g~-~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
+.++++|.|+...+.++ ..+. ..+.--.+-.+.++.+.-...+.+++-..-+. .-+.++..+|+.+|++++|+.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~l 100 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV 100 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence 35666666665444332 2221 22222233345666666677888888766443 446788889999999999888
Q ss_pred eCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1107 AHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+... +......++|++.++...+
T Consensus 101 s~~~~~~~~~~~~~~g~~~~l~Kp~ 125 (150)
T 4e7p_A 101 TTFKRAGYFERAVKAGVDAYVLKER 125 (150)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEETTS
T ss_pred eCCCCHHHHHHHHHCCCcEEEecCC
Confidence 8754 4777888999998885543
No 240
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.86 E-value=2.1 Score=50.74 Aligned_cols=69 Identities=14% Similarity=0.144 Sum_probs=51.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----------CC---------CCEEEecCCCHHHHHhc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----------LD---------LPVYFGDAGSREVLHKV 1069 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----------~g---------~~vi~GDatd~evL~~A 1069 (1207)
.+|.|+|.|.+|..++..|...|++|+++|.+++..+.++. .| ..... .++.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i--~~~~~----- 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF--SSSTK----- 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE--ESCGG-----
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh--cCCHH-----
Confidence 46889999999999999999999999999999987765432 11 01111 22322
Q ss_pred CccccCEEEEecCCcc
Q 000968 1070 GAERACAAAITLDTPG 1085 (1207)
Q Consensus 1070 gI~~A~~VViatddd~ 1085 (1207)
.+.+||.||.+++++.
T Consensus 111 ~~~~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 111 ELSTVDLVVEAVFEDM 126 (463)
T ss_dssp GGTTCSEEEECCCSCH
T ss_pred HHCCCCEEEEcCCCCH
Confidence 2578999999998764
No 241
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.81 E-value=4.7 Score=45.19 Aligned_cols=128 Identities=15% Similarity=0.128 Sum_probs=78.2
Q ss_pred cccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhh----hh------CCCCEEE-ecCCCHHHHHhcCccccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYF-GDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~----r~------~g~~vi~-GDatd~evL~~AgI~~A~~VV 1078 (1207)
++.|+|.|.+|..++..|...+. .++++|.|+++.+-. .. ....+.. +| . ..+..||.||
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~-----~a~~~aD~Vi 72 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y-----EDMRGSDIVL 72 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G-----GGGTTCSEEE
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H-----HHhCCCCEEE
Confidence 36799999999999999988777 699999998776421 11 1333443 22 1 2478999999
Q ss_pred EecCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHH-HHHHHh-CCC--CeeecC-CcHHHHHHHHH
Q 000968 1079 ITLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK-AGA--TAVVPE-TLEPSLQLAAA 1138 (1207)
Q Consensus 1079 iatddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~-~~~L~~-aGA--d~VI~p-~~eaal~La~~ 1138 (1207)
++.+.+. .|. .++..+++..|+..+++-++-.+. ...+.+ .|. ..|+-- +..-..++-..
T Consensus 73 ~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~~~~p~~rviG~gt~LD~~R~~~~ 152 (308)
T 2d4a_B 73 VTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVMYKKTGFPRERVIGFSGILDSARMAYY 152 (308)
T ss_dssp ECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHHH
T ss_pred EeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCCChhhEEEecccchHHHHHHH
Confidence 9976542 333 445567778899888875443332 222323 233 366644 43334444444
Q ss_pred HHHHcCCC
Q 000968 1139 VLAQAKLP 1146 (1207)
Q Consensus 1139 iL~~lg~~ 1146 (1207)
+-+.++++
T Consensus 153 la~~lgv~ 160 (308)
T 2d4a_B 153 ISQKLGVS 160 (308)
T ss_dssp HHHHHTSC
T ss_pred HHHHhCcC
Confidence 44444443
No 242
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=85.77 E-value=3.1 Score=46.63 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=81.7
Q ss_pred cccccCCCchHHHHHHHHHhcC--CCeEeecCChHHHHh-hh---h-----CCCCEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL--IPFVALDVRSDRVAI-GR---A-----LDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g--i~vvVID~D~e~ve~-~r---~-----~g~~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++-.|...+ -+++++|.|+++.+. .. . .... +.++ +. ..+..||.||+
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~-v~~~--~~-----~a~~~aD~Vii 73 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVW-VWAG--SY-----GDLEGARAVVL 73 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCE-EEEC--CG-----GGGTTEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeE-EEEC--CH-----HHhCCCCEEEE
Confidence 5789999999999999998876 479999999887753 11 1 1222 3332 22 23789999999
Q ss_pred ecCCcc-----------hhH----HHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCCC--eeecC-CcHHHHHHHHH
Q 000968 1080 TLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGAT--AVVPE-TLEPSLQLAAA 1138 (1207)
Q Consensus 1080 atddd~-----------~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGAd--~VI~p-~~eaal~La~~ 1138 (1207)
+.+.+. .|. .++..+++.+|+..+++- .++-+. ..+ +..|.+ .||-- +..-..++-..
T Consensus 74 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~ 152 (310)
T 2xxj_A 74 AAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA-TNPVDVMTQVAYALSGLPPGRVVGSGTILDTARFRAL 152 (310)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC-SSSHHHHHHHHHHHHTCCGGGEEECTTHHHHHHHHHH
T ss_pred CCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe-cCchHHHHHHHHHHcCCCHHHEEecCcchhHHHHHHH
Confidence 886652 333 345567778999888874 555432 222 333443 67654 54444566666
Q ss_pred HHHHcCCCH
Q 000968 1139 VLAQAKLPA 1147 (1207)
Q Consensus 1139 iL~~lg~~~ 1147 (1207)
+-+.+++++
T Consensus 153 la~~lgv~~ 161 (310)
T 2xxj_A 153 LAEYLRVAP 161 (310)
T ss_dssp HHHHHTSCG
T ss_pred HHHHhCcCH
Confidence 656666554
No 243
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.73 E-value=2.7 Score=47.36 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=77.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhh----hh------CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~----r~------~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
.++.|+|.|.+|..++..|...|. +++++|.|+++.+.. .. ....+... +| + ..+..||.||
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~--~al~~aD~Vi 77 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y--DDLAGADVVI 77 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G--GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H--HHhCCCCEEE
Confidence 368999999999999999999888 899999999876522 11 12233321 12 1 2368999999
Q ss_pred EecCCcc----------------hh----HHHHHHHHHhCCCceEEEeeCChHHH-HHHHhC---CCCeeecC-CcHHHH
Q 000968 1079 ITLDTPG----------------AN----YRTVWALSKYFPNVKTFVRAHDIDHG-LNLEKA---GATAVVPE-TLEPSL 1133 (1207)
Q Consensus 1079 iatddd~----------------~N----i~i~l~aR~l~P~i~IIaRa~d~~~~-~~L~~a---GAd~VI~p-~~eaal 1133 (1207)
++.+.+. .| ..++..+.+..|+..++.-++-.... ..+.+. -...|+-- +..-+.
T Consensus 78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~~~~~g~~~~rviG~gt~ld~~ 157 (322)
T 1t2d_A 78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTS 157 (322)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHCCCGGGEEECCHHHHHH
T ss_pred EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHHHHhcCCChHHEEeccCcccHH
Confidence 9973331 13 23455667778998777655543322 222222 24566633 333333
Q ss_pred HHHHHHHHHcCCC
Q 000968 1134 QLAAAVLAQAKLP 1146 (1207)
Q Consensus 1134 ~La~~iL~~lg~~ 1146 (1207)
++-..+-+.++++
T Consensus 158 R~~~~la~~lgv~ 170 (322)
T 1t2d_A 158 RLKYYISQKLNVC 170 (322)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCC
Confidence 4444444444443
No 244
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=85.72 E-value=1.5 Score=49.24 Aligned_cols=124 Identities=14% Similarity=0.084 Sum_probs=78.8
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
-++.|+|+|.+|+..++.|.+. +..++ +.|.|+++.+... ..|.+.++.|. .+.|.. .+.|+|+++++++..
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~--~~ll~~---~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSY--EELCKD---ETIDIIYIPTYNQGH 80 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSH--HHHHHC---TTCSEEEECCCGGGH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCH--HHHhcC---CCCCEEEEcCCCHHH
Confidence 3688999999999999999884 56666 6799999887654 44654333322 233332 478999999988743
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+..+.+.++.++.
T Consensus 81 -~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 141 (330)
T 3e9m_A 81 -YSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQ 141 (330)
T ss_dssp -HHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHH
T ss_pred -HHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHh
Confidence 34444444444 356663 4455555444 556776655 3344555566666665
No 245
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=85.70 E-value=6.9 Score=37.59 Aligned_cols=97 Identities=9% Similarity=0.091 Sum_probs=63.6
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
+..++++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-..-+. ..+..+..+|+.+|++++|+.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l 85 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGCNIIT-FTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVI 85 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEE-ESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCCeEEE-eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 45677777776654433 345665552 233355666666667888888765543 446788889999999999888
Q ss_pred eCChH--HHHHHHhCC-CCeeecCCc
Q 000968 1107 AHDID--HGLNLEKAG-ATAVVPETL 1129 (1207)
Q Consensus 1107 a~d~~--~~~~L~~aG-Ad~VI~p~~ 1129 (1207)
+...+ ......+.| ++.++...+
T Consensus 86 s~~~~~~~~~~~~~~g~~~~~l~kP~ 111 (154)
T 2rjn_A 86 SGYADAQATIDAVNRGKISRFLLKPW 111 (154)
T ss_dssp ECGGGHHHHHHHHHTTCCSEEEESSC
T ss_pred ecCCCHHHHHHHHhccchheeeeCCC
Confidence 76654 555666777 887775443
No 246
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=85.63 E-value=0.61 Score=53.40 Aligned_cols=86 Identities=12% Similarity=-0.016 Sum_probs=57.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|++|+.+++.|+..|.++++.|+++...+... |...+ .+.+.+ +.++|.|++.++....+..
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~----~~l~el----l~~sDvV~l~~Plt~~T~~ 243 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH----DTLDSL----LGASDIFLIAAPGRPELKG 243 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC----SSHHHH----HHTCSEEEECSCCCGGGTT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe----CCHHHH----HhhCCEEEEecCCCHHHHH
Confidence 3588999999999999999999999999999864433222 33221 233332 3578999999986544332
Q ss_pred --HHHHHHHhCCCceEEE
Q 000968 1090 --TVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1090 --i~l~aR~l~P~i~IIa 1105 (1207)
-...+..+-|+..+|=
T Consensus 244 li~~~~l~~mk~gailIN 261 (345)
T 4g2n_A 244 FLDHDRIAKIPEGAVVIN 261 (345)
T ss_dssp CBCHHHHHHSCTTEEEEE
T ss_pred HhCHHHHhhCCCCcEEEE
Confidence 2344556667654443
No 247
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=85.59 E-value=6.9 Score=37.60 Aligned_cols=65 Identities=8% Similarity=0.065 Sum_probs=45.1
Q ss_pred HHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeCCh--HHHHHHHhCC-CCeeecCCc
Q 000968 1065 VLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHDI--DHGLNLEKAG-ATAVVPETL 1129 (1207)
Q Consensus 1065 vL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~d~--~~~~~L~~aG-Ad~VI~p~~ 1129 (1207)
.+....-...+.+++-..-+. .-+.++..+|+.+|++++|+.+... +......++| ++.++..-+
T Consensus 50 a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~ 118 (153)
T 3hv2_A 50 ALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPW 118 (153)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSC
T ss_pred HHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCC
Confidence 333333346788887765443 3467888889999999998887654 5666778889 888775543
No 248
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=85.58 E-value=2 Score=48.52 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=79.5
Q ss_pred cccccccCCCchHHHHHHHHHhc--CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSER--LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~--gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
+-++.|+|+|.+|+..++.|.+. +..++ +.|.|+++.+... ..|++ .+. +-.+.|.. .+.|+|+++++++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~-~~~--~~~~ll~~---~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR-GHA--SLTDMLAQ---TDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCE-EES--CHHHHHHH---CCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCc-eeC--CHHHHhcC---CCCCEEEECCCcH
Confidence 34799999999999999999886 56655 7899999987664 44653 332 22344543 4789999999886
Q ss_pred chhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1085 GANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
.. ...+..+-+.+ .++++. +.+.++...+ ++.|....+ ...+..+.+-+..++.
T Consensus 87 ~h-~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 149 (354)
T 3q2i_A 87 LH-PTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQ 149 (354)
T ss_dssp GH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHh
Confidence 43 34444444443 467764 4455555444 455776655 2334455555666655
No 249
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=85.53 E-value=1.1 Score=48.96 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=53.4
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatd 1082 (1207)
.+++|.| .|.+|+.+++.|.+.|++|++++++++. +. .++.++.||.+|++.+.++=- .+.|.||-+..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 4566665 5889999999999999999999998764 22 267789999999998876521 24788887654
No 250
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=85.42 E-value=2.2 Score=48.24 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=79.2
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
-++.|+|+|.+|+..++.|.+. +.+++ +.|.|+++.+... ..|++. + ++.+-+.+ -.+.|+|+++++++..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~-~---~~~~~~l~--~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG-D---ATMEALLA--REDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC-C---SSHHHHHH--CSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC-c---CCHHHHhc--CCCCCEEEEeCChHHH
Confidence 3689999999999999999876 66755 6799999887664 446654 2 34443332 2468999999988644
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+....+-+..++.
T Consensus 80 -~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~ 140 (354)
T 3db2_A 80 -AEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMID 140 (354)
T ss_dssp -HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHH
T ss_pred -HHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHh
Confidence 34444444444 457764 4555555554 455766555 3344555555555554
No 251
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=85.36 E-value=2.3 Score=47.58 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=77.5
Q ss_pred ccccccCCCchHHHHHHHHH-h-cCCCe-EeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQIIAQLLS-E-RLIPF-VALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~-~-~gi~v-vVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
-++.|+|+|.+|+..++.|. . .+.++ .+.|.++++.+... ..|.+.++.|. .+.+.. .++|+|+++++++.
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~--~~~l~~---~~~D~V~i~tp~~~ 83 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNY--KDMIDT---ENIDAIFIVAPTPF 83 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCH--HHHHTT---SCCSEEEECSCGGG
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCH--HHHhcC---CCCCEEEEeCChHh
Confidence 46899999999999999997 4 35564 46799999887654 44665555432 233322 46899999998764
Q ss_pred hhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhC-CCCeeecC--CcHHHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKA-GATAVVPE--TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~a-GAd~VI~p--~~eaal~La~~iL~ 1141 (1207)
. ...+..+-+.+ .++++. +.+.++...+ ++. |....+.. .+..+...+..++.
T Consensus 84 h-~~~~~~al~~G--~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~ 146 (346)
T 3cea_A 84 H-PEMTIYAMNAG--LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVD 146 (346)
T ss_dssp H-HHHHHHHHHTT--CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHH
T ss_pred H-HHHHHHHHHCC--CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHH
Confidence 3 33333333333 456664 3455554444 456 77665532 23445566666665
No 252
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=85.34 E-value=4.8 Score=37.98 Aligned_cols=96 Identities=5% Similarity=-0.051 Sum_probs=65.0
Q ss_pred CCCeEeecCChHHHHhh----hh-CCCCEEEecCCCHHHHHhcCc-cccCEEEEecCCc-c-hhHHHHHHHHH--hCCCc
Q 000968 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGA-ERACAAAITLDTP-G-ANYRTVWALSK--YFPNV 1101 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~-~g~~vi~GDatd~evL~~AgI-~~A~~VViatddd-~-~Ni~i~l~aR~--l~P~i 1101 (1207)
...++++|.|+...+.+ +. .|+.++. -.+-.+.++...- ...+.+++-..-+ . .-+.++..+|+ .+|++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~-~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~ 82 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYDFIE-VENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANT 82 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCEEEE-ECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCccEEE-ECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCC
Confidence 34677777777654433 34 5666652 2233455666655 6788888876655 3 34677888888 88999
Q ss_pred eEEEeeCC--hHHHHHHHhCCCCeeecCC
Q 000968 1102 KTFVRAHD--IDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1102 ~IIaRa~d--~~~~~~L~~aGAd~VI~p~ 1128 (1207)
++|+-+.. .+......++|++.++..-
T Consensus 83 ~ii~ls~~~~~~~~~~~~~~g~~~~l~KP 111 (140)
T 3lua_A 83 PVIIATKSDNPGYRHAALKFKVSDYILKP 111 (140)
T ss_dssp CEEEEESCCCHHHHHHHHHSCCSEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHcCCCEEEECC
Confidence 99888764 4677788899999888543
No 253
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=85.32 E-value=2.7 Score=46.53 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=54.4
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCCh----------HHHHhhh---hCCCCEEEecCCCHHHHHhcCcc-cc
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRS----------DRVAIGR---ALDLPVYFGDAGSREVLHKVGAE-RA 1074 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~----------e~ve~~r---~~g~~vi~GDatd~evL~~AgI~-~A 1074 (1207)
.+++|.| .|-+|+.+++.|.+.|+.|+++++++ +..+.+. ..++.++.||.++++.++++=-. +.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 3578887 59999999999999999999998643 3333332 24678999999999888765211 67
Q ss_pred CEEEEecC
Q 000968 1075 CAAAITLD 1082 (1207)
Q Consensus 1075 ~~VViatd 1082 (1207)
|.||-+..
T Consensus 83 d~vih~A~ 90 (348)
T 1ek6_A 83 MAVIHFAG 90 (348)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 88877654
No 254
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=85.29 E-value=2.7 Score=46.84 Aligned_cols=122 Identities=11% Similarity=0.029 Sum_probs=78.3
Q ss_pred cccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|+|.+|+..++.|... +..++ +.|.++++.+... ..|...++.|. .+.| . .++|+|+++++++..
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~l-~---~~~D~V~i~tp~~~h- 75 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQL--EVFF-K---SSFDLVYIASPNSLH- 75 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCH--HHHH-T---SSCSEEEECSCGGGH-
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCH--HHHh-C---CCCCEEEEeCChHHH-
Confidence 478999999999999999875 45554 7899999887654 44654455432 2333 2 578999999987643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+..+...++.++.
T Consensus 76 ~~~~~~al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 76 FAQAKAALSAG--KHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLA 136 (325)
T ss_dssp HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcC--CcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhh
Confidence 34444443333 456665 3455554444 456876655 4455666666666664
No 255
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.22 E-value=1.9 Score=48.26 Aligned_cols=134 Identities=19% Similarity=0.166 Sum_probs=81.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh---hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG---RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~---r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
.++.|+|.|.+|..++..|...+. +++++|.|++..... .....+-+.+. +| + ..+..||.||++..-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d---~--~~l~~aD~Vi~aag~~ 88 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KD---L--SASAHSKVVIFTVNSL 88 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SC---G--GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CC---H--HHHCCCCEEEEcCCCC
Confidence 479999999999999999998888 899999998522111 11111112221 22 2 2378999999986322
Q ss_pred ----------chh----HHHHHHHHHhCCCceEEEeeCChH-HHHHHHh-CC--CCeeecC-CcHHHHHHHHHHHHHcCC
Q 000968 1085 ----------GAN----YRTVWALSKYFPNVKTFVRAHDID-HGLNLEK-AG--ATAVVPE-TLEPSLQLAAAVLAQAKL 1145 (1207)
Q Consensus 1085 ----------~~N----i~i~l~aR~l~P~i~IIaRa~d~~-~~~~L~~-aG--Ad~VI~p-~~eaal~La~~iL~~lg~ 1145 (1207)
..| ..++..+.+..|+..++.-++-.+ ....+.+ -| ...|+-- +..-..++-..+-+.+++
T Consensus 89 ~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~~R~~~~la~~lgv 168 (303)
T 2i6t_A 89 GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKA 168 (303)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHTSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCCCCCchHHHHHHHHHHHcCC
Confidence 233 345566777789987766555433 2333333 23 3477755 555556777777777777
Q ss_pred CHHH
Q 000968 1146 PASE 1149 (1207)
Q Consensus 1146 ~~~e 1149 (1207)
++.+
T Consensus 169 ~~~~ 172 (303)
T 2i6t_A 169 QTSG 172 (303)
T ss_dssp TTGG
T ss_pred ChHH
Confidence 6543
No 256
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=85.17 E-value=2.5 Score=47.17 Aligned_cols=123 Identities=15% Similarity=0.122 Sum_probs=81.1
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
-++.|+|+|.+|+..++.|.+. +.+++ +.|.|+++.+... ..|.+ + ++.+-+.+. .+.|+|++++++...
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~---~~~~~~l~~--~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--V---RTIDAIEAA--ADIDAVVICTPTDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--E---CCHHHHHHC--TTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--c---CCHHHHhcC--CCCCEEEEeCCchhH
Confidence 3688999999999999999875 66666 7899999887664 45665 3 344433322 468999999987643
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLAQ 1142 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~~ 1142 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|....+ ...+....+-+..++..
T Consensus 77 -~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~ 138 (331)
T 4hkt_A 77 -ADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDD 138 (331)
T ss_dssp -HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHT
T ss_pred -HHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHc
Confidence 34444444444 457764 4566655554 566776665 33455666666666653
No 257
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=85.11 E-value=3.5 Score=39.04 Aligned_cols=59 Identities=27% Similarity=0.310 Sum_probs=42.8
Q ss_pred HHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-------HHhhhHHHHHHH
Q 000968 271 LAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQM-------NALKAEEDVANI 329 (1207)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~-------~a~~a~~~~~~~ 329 (1207)
..++.+.++.+......|.|+..||.|..-++.++++.++....|+- .+.+||.+|++.
T Consensus 26 e~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L 91 (101)
T 3u1c_A 26 EQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777777888889999999988888888887766665554 455566666653
No 258
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.07 E-value=4.9 Score=45.66 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=82.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHh----hhhC----CCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRAL----DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~----~r~~----g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
..++.|+|.|.+|..++..|...+. +++++|.++++.+- +... ..+-+.+. .|. + .+..||.||
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~-~d~---~--~~~~aDiVv 92 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS-KDY---S--VTANSKLVI 92 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC-SSG---G--GGTTEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc-CCH---H--HhCCCCEEE
Confidence 4579999999999999999988887 79999999886642 2211 12233322 122 2 478999999
Q ss_pred EecCCc-----------chhHH----HHHHHHHhCCCceEEEeeCChHH--HHHH-HhCCC--CeeecC-CcHHHHHHHH
Q 000968 1079 ITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHDIDH--GLNL-EKAGA--TAVVPE-TLEPSLQLAA 1137 (1207)
Q Consensus 1079 iatddd-----------~~Ni~----i~l~aR~l~P~i~IIaRa~d~~~--~~~L-~~aGA--d~VI~p-~~eaal~La~ 1137 (1207)
++.+.+ ..|.. ++..+++.+|+..+++-++ +-+ ...+ +..|. ..|+-- +..=..++-.
T Consensus 93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN-Pvdi~t~~~~k~sg~p~~rviG~gt~LD~~R~~~ 171 (331)
T 4aj2_A 93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN-PVDILTYVAWKISGFPKNRVIGSGCNLDSARFRY 171 (331)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS-SHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC-hHHHHHHHHHHHhCCCHHHEEeeccccHHHHHHH
Confidence 987654 34543 4457778899987766664 433 2222 22344 345533 3333345555
Q ss_pred HHHHHcCCCHH
Q 000968 1138 AVLAQAKLPAS 1148 (1207)
Q Consensus 1138 ~iL~~lg~~~~ 1148 (1207)
.+-..+++++.
T Consensus 172 ~la~~lgv~~~ 182 (331)
T 4aj2_A 172 LMGERLGVHPL 182 (331)
T ss_dssp HHHHHHTSCGG
T ss_pred HHHHHhCCCHH
Confidence 55555565553
No 259
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=85.03 E-value=2.5 Score=47.90 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=57.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH-
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY- 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni- 1088 (1207)
..+-|+|+|.+|+.+++.|...|.++++.|++++..+. ..-.+.-.+-.+.+ .++|.|++.++....+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~~~~l~ell-----~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADH-----FHETVAFTATADAL-----ATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-----CSEEEEGGGCHHHH-----HHCSEEEECCCCCGGGTT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-----HhhccccCCHHHHH-----hhCCEEEEcCCCchHHHH
Confidence 35889999999999999999999999999988754322 22223322333343 56899999987653332
Q ss_pred -HHHHHHHHhCCCceEEEee
Q 000968 1089 -RTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1089 -~i~l~aR~l~P~i~IIaRa 1107 (1207)
.-...+..+.|+..+|=..
T Consensus 208 li~~~~l~~mk~gailIN~a 227 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIG 227 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECS
T ss_pred hcCHHHHhcCCCCCEEEEcC
Confidence 2223445566665444333
No 260
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=85.03 E-value=0.9 Score=49.40 Aligned_cols=73 Identities=18% Similarity=0.157 Sum_probs=57.2
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCc------cccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA------ERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI------~~A~~VViatd 1082 (1207)
..++|.|. |.+|+.+++.|.+.|..|++++++++..+.....+..++.+|.+|++.++++-- .+.|.+|-...
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 96 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG 96 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 35666665 679999999999999999999999998887766678889999999987765421 25677766543
No 261
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.01 E-value=1.4 Score=48.96 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=54.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHh-hhh-CCCCEEEecCCCHHHHHhcCcc--ccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAI-GRA-LDLPVYFGDAGSREVLHKVGAE--RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~-~r~-~g~~vi~GDatd~evL~~AgI~--~A~~VViatd 1082 (1207)
+++|.|. |.+|+.+++.|.+.|++|+++++++..... ... .++.++.||.+|++.++++ ++ ..|+||-+..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~-~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERA-FDSFKPTHVVHSAA 97 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHH-HhhcCCCEEEECCc
Confidence 5788886 999999999999999999999986543211 111 3677899999999987765 23 6788887664
No 262
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.98 E-value=6.3 Score=44.81 Aligned_cols=134 Identities=12% Similarity=0.066 Sum_probs=82.3
Q ss_pred ccccccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHHhh----hh----CCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1008 LQDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RA----LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1008 lk~hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~----r~----~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
...++.|+|.|.+|..++..|...+. +++++|.++++.+-. .. ....-+.+. +| + ..+..||.|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-~d---~--~~~~daDiV 93 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-KD---Y--SVSAGSKLV 93 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-SS---S--CSCSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-CC---H--HHhCCCCEE
Confidence 45689999999999999999998887 899999999866421 11 112223321 12 1 237899999
Q ss_pred EEecCCc-----------chhHH----HHHHHHHhCCCceEEEeeCChHHH--HHH-HhCC--CCeeecC-CcHHHHHHH
Q 000968 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAG--ATAVVPE-TLEPSLQLA 1136 (1207)
Q Consensus 1078 Viatddd-----------~~Ni~----i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aG--Ad~VI~p-~~eaal~La 1136 (1207)
|++.+.+ ..|.. ++..+.+.+|+..+++-++ +-+. ..+ +..| ..+|+-- +..=+.++-
T Consensus 94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN-Pvdi~t~~~~k~sg~p~~rViG~gt~LDs~R~~ 172 (330)
T 3ldh_A 94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE-LGTDKNKQDWKLSGLPMHRIIGSGCNLDSARFR 172 (330)
T ss_dssp EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS-SHHHHHHHHHHHHCCCGGGEECCTTHHHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC-ccHHHHHHHHHHhCCCHHHeecccCchhHHHHH
Confidence 9986543 35543 4457778899987666664 4322 222 2334 2455533 222234455
Q ss_pred HHHHHHcCCCHH
Q 000968 1137 AAVLAQAKLPAS 1148 (1207)
Q Consensus 1137 ~~iL~~lg~~~~ 1148 (1207)
..+-+.+|+++.
T Consensus 173 ~~lA~~lgv~~~ 184 (330)
T 3ldh_A 173 YLMGERLGVHSC 184 (330)
T ss_dssp HHHHHHHTSCTT
T ss_pred HHHHHHhCCCHH
Confidence 555556666653
No 263
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=84.95 E-value=0.9 Score=51.59 Aligned_cols=88 Identities=13% Similarity=0.043 Sum_probs=57.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH-
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY- 1088 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni- 1088 (1207)
..+-|+|+|++|+.+++.|+..|.++++.|+++...+.....|.. + .+.+.+ +.++|.|+++++....+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~--~---~~l~el----l~~aDvV~l~~P~t~~t~~ 216 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLR--Q---VACSEL----FASSDFILLALPLNADTLH 216 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEE--E---CCHHHH----HHHCSEEEECCCCSTTTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCce--e---CCHHHH----HhhCCEEEEcCCCCHHHHH
Confidence 358899999999999999999999999999987444444444532 1 122222 356889999888643332
Q ss_pred -HHHHHHHHhCCCceEEEe
Q 000968 1089 -RTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1089 -~i~l~aR~l~P~i~IIaR 1106 (1207)
.-...++.+.|+..+|-.
T Consensus 217 li~~~~l~~mk~gailIN~ 235 (330)
T 4e5n_A 217 LVNAELLALVRPGALLVNP 235 (330)
T ss_dssp CBCHHHHTTSCTTEEEEEC
T ss_pred HhCHHHHhhCCCCcEEEEC
Confidence 222345556666544433
No 264
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=84.94 E-value=3 Score=43.36 Aligned_cols=93 Identities=15% Similarity=0.023 Sum_probs=59.9
Q ss_pred ccccc--CCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC--------CCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1011 HIILC--GFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--------DLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIi--G~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~--------g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.++-+ |.|.++..+++. +..++.+|.+++.++.+++. ++.++.||+.+. +. .....|.|++.
T Consensus 58 ~vLDlGcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~--~~~~~D~v~~~ 129 (204)
T 3njr_A 58 LLWDIGGGSGSVSVEWCLA----GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--LA--DLPLPEAVFIG 129 (204)
T ss_dssp EEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG--GT--TSCCCSEEEEC
T ss_pred EEEEecCCCCHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh--cc--cCCCCCEEEEC
Confidence 44444 555555555443 78999999999998776532 467889998762 22 22568888765
Q ss_pred cCCcchhHHHHHHHHHhCCCceEEEeeCChHHH
Q 000968 1081 LDTPGANYRTVWALSKYFPNVKTFVRAHDIDHG 1113 (1207)
Q Consensus 1081 tddd~~Ni~i~l~aR~l~P~i~IIaRa~d~~~~ 1113 (1207)
...+.. .+....+.+.|+-++++...+.+..
T Consensus 130 ~~~~~~--~l~~~~~~LkpgG~lv~~~~~~~~~ 160 (204)
T 3njr_A 130 GGGSQA--LYDRLWEWLAPGTRIVANAVTLESE 160 (204)
T ss_dssp SCCCHH--HHHHHHHHSCTTCEEEEEECSHHHH
T ss_pred CcccHH--HHHHHHHhcCCCcEEEEEecCcccH
Confidence 533222 4444556678888888877765543
No 265
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=84.93 E-value=0.71 Score=52.15 Aligned_cols=85 Identities=12% Similarity=0.084 Sum_probs=56.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecC-ChHHHHhhhhCCCCEEEecCCCH-HHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDV-RSDRVAIGRALDLPVYFGDAGSR-EVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~-D~e~ve~~r~~g~~vi~GDatd~-evL~~AgI~~A~~VViatddd~~N 1087 (1207)
..+-|+|+|.+|+.+++.|...|.+++++|+ +++.. .....|... ..+. +.+ .++|.|+++++....+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~----~~~l~ell-----~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATF----HDSLDSLL-----SVSQFFSLNAPSTPET 216 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEE----CSSHHHHH-----HHCSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEE----cCCHHHHH-----hhCCEEEEeccCchHH
Confidence 3588999999999999999999999999999 87653 344445532 1133 333 4789999998865433
Q ss_pred HHH--HHHHHHhCCCceEE
Q 000968 1088 YRT--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1088 i~i--~l~aR~l~P~i~II 1104 (1207)
..+ ...+..+.|+..+|
T Consensus 217 ~~~i~~~~l~~mk~gailI 235 (320)
T 1gdh_A 217 RYFFNKATIKSLPQGAIVV 235 (320)
T ss_dssp TTCBSHHHHTTSCTTEEEE
T ss_pred HhhcCHHHHhhCCCCcEEE
Confidence 221 22334455664443
No 266
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=84.70 E-value=2.6 Score=47.25 Aligned_cols=123 Identities=12% Similarity=0.053 Sum_probs=80.3
Q ss_pred cccccCCCchHHHHHHHHHhcCC---C-eEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI---P-FVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi---~-vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
++-|+|+|.+|+..++.|..... . +-+.|.|+++.+... ..|.+-++.|. .+.|.. .+.|+|+++++++.
T Consensus 4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~--~~ll~~---~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSY--EELAKD---PNVEVAYVGTQHPQ 78 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSH--HHHHHC---TTCCEEEECCCGGG
T ss_pred EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCH--HHHhcC---CCCCEEEECCCcHH
Confidence 57899999999999999986543 2 456799999887654 45776555432 334442 57899999998864
Q ss_pred hhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
. ...+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+..+.+-++.++.
T Consensus 79 H-~~~~~~al~~G--khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~ 140 (334)
T 3ohs_X 79 H-KAAVMLCLAAG--KAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLA 140 (334)
T ss_dssp H-HHHHHHHHHTT--CEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred H-HHHHHHHHhcC--CEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHh
Confidence 3 44444444444 467775 4566665555 455765544 3445566666666664
No 267
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=84.68 E-value=0.82 Score=54.59 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=58.2
Q ss_pred ccccccCCCchHHH-HHHHHHhcCCCeEeecCCh-HHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVRS-DRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~gi~vvVID~D~-e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.|+.++|.|..|.. +++.|.+.|++|.+.|..+ ...+.+++.|++++.|. +++ .+..++.||+...-+..|
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--~~~-----~~~~~d~vV~Spgi~~~~ 95 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--RPE-----NVLDASVVVVSTAISADN 95 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--CGG-----GGTTCSEEEECTTSCTTC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--CHH-----HcCCCCEEEECCCCCCCC
Confidence 58999999999996 8999999999999999864 35567888899999883 443 245689988876665555
Q ss_pred HHH
Q 000968 1088 YRT 1090 (1207)
Q Consensus 1088 i~i 1090 (1207)
-.+
T Consensus 96 p~~ 98 (494)
T 4hv4_A 96 PEI 98 (494)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 268
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=84.66 E-value=14 Score=33.96 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=61.6
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHH--hCCCceEE
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKTF 1104 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~--l~P~i~II 1104 (1207)
...+.++|.|+...+.+ ...|+..+.--.+-.+.++...-...+.+++-..-+. .-...+..+|+ .+|+++++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii 83 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVL 83 (128)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHHcCCcEEEeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEE
Confidence 35678888877654333 3446532222223355666666667888888765543 34667777877 45777877
Q ss_pred EeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1105 VRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1105 aRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+-+.. .+......++|++..+...+
T Consensus 84 ~~s~~~~~~~~~~~~~~ga~~~l~KP~ 110 (128)
T 1jbe_A 84 MVTAEAKKENIIAAAQAGASGYVVKPF 110 (128)
T ss_dssp EEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred EEecCccHHHHHHHHHhCcCceeecCC
Confidence 76654 45677788999998875443
No 269
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=84.65 E-value=2.1 Score=48.31 Aligned_cols=93 Identities=19% Similarity=0.211 Sum_probs=63.4
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHH----hhhh------CCCCEEEecCCCHHHHHhcCccccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA----IGRA------LDLPVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve----~~r~------~g~~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.. .... +.|. .+ ...+..||.||
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~-~~-----~~a~~~aDvVi 74 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGT-ND-----YGPTEDSDVCI 74 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEE-SS-----SGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEEC-CC-----HHHhCCCCEEE
Confidence 47799999999999999988887 8999999998754 1111 1223 3332 11 23568899999
Q ss_pred EecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChH
Q 000968 1079 ITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDID 1111 (1207)
Q Consensus 1079 iatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~ 1111 (1207)
++.+.+ ..|. .++..+++.+|+..+++-+ ++-
T Consensus 75 i~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt-NPv 121 (314)
T 3nep_X 75 ITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA-NPL 121 (314)
T ss_dssp ECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC-SSH
T ss_pred ECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC-Cch
Confidence 988655 3453 3445677789998666655 443
No 270
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=84.63 E-value=1.1 Score=47.62 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=55.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhc--CccccCEEEEec
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKV--GAERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~A--gI~~A~~VViat 1081 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+..... +..++.+|.+|++.++++ ...+.|.+|-..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 4667765 7899999999999999999999998877655422 567889999999887744 134678887654
No 271
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=84.56 E-value=0.49 Score=48.65 Aligned_cols=67 Identities=15% Similarity=0.073 Sum_probs=54.4
Q ss_pred ccccccC-CCchHHHHHHHHHhcCC--CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
.+++|.| .|.+|+.+++.|.+.|. ++++++++++. ...++.++.+|.++++.+.++- .|.||-+...
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~---~d~vi~~a~~ 75 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS---IDTAFCCLGT 75 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC---CSEEEECCCC
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh---hcEEEECeee
Confidence 3688887 79999999999999998 99999998765 2345677889999998887765 8888887653
No 272
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=84.52 E-value=0.35 Score=53.98 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=43.8
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAER 1073 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~ 1073 (1207)
.|+|||.|..|...|..|.+.|++|+++|..++. +.+...|++..+.+|++.++..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~-------~~~~~~g~~l~~~~l~~l~~~~ 61 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI-------GSPVRCGEGLSKGILNEADIKA 61 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST-------TCSCCSCCEEETHHHHHTTCCC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC-------CCCCceecccCHHHHHHcCCCc
Confidence 4899999999999999999999999999986532 2333345566677888877653
No 273
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=84.48 E-value=0.71 Score=50.29 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=54.7
Q ss_pred ccccccCC-CchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatd 1082 (1207)
.+++|.|. |.+|+.+++.|.+. |.+|+++++++...+. ..++.++.||.+|++.++++=- ..+|.||-+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 77 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV--VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAA 77 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH--HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc--cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence 35788887 99999999999998 8999999987654221 2367899999999988876521 16788887754
No 274
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=84.47 E-value=0.59 Score=51.51 Aligned_cols=71 Identities=20% Similarity=0.238 Sum_probs=53.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCcc--ccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE--RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~--~A~~VViatd 1082 (1207)
+++|.| .|-+|+.+++.|.+.|..|+++++++......-..++.++.||.++++.+.++ ++ +.|.||-+..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vih~a~ 76 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV-FTQENIEAVMHFAA 76 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHH-HHHSCEEEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHH-HhhcCCCEEEECCc
Confidence 467776 59999999999999999999998865432111112678999999999988765 22 6788877654
No 275
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=84.41 E-value=0.65 Score=53.27 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=64.7
Q ss_pred cccc-cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1007 DLQD-HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1007 ~lk~-hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
.+.+ .+-|+|+|.+|+.+++.|+..|.+|++.|+++.. +.....|+.. ..+.+.+ +.++|.|++.++...
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~~~l~el----l~~aDiV~l~~Plt~ 227 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARADGFAV----AESKDAL----FEQSDVLSVHLRLND 227 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHTTCEE----CSSHHHH----HHHCSEEEECCCCST
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhcCceE----eCCHHHH----HhhCCEEEEeccCcH
Confidence 3443 5889999999999999999999999999988643 4445566532 1233322 346789999887553
Q ss_pred hhH--HHHHHHHHhCCCceEEEeeC-----ChHHHHHHHh
Q 000968 1086 ANY--RTVWALSKYFPNVKTFVRAH-----DIDHGLNLEK 1118 (1207)
Q Consensus 1086 ~Ni--~i~l~aR~l~P~i~IIaRa~-----d~~~~~~L~~ 1118 (1207)
.+. .-...+..+-|+..+|=-.+ ...-.+.|++
T Consensus 228 ~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 228 ETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNR 267 (352)
T ss_dssp TTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHH
T ss_pred HHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHh
Confidence 332 22234455566654444332 3344555554
No 276
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=84.40 E-value=0.63 Score=52.67 Aligned_cols=72 Identities=19% Similarity=0.046 Sum_probs=48.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCC-CHHHHHhcCccccCEEEEecCCcc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAG-SREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDat-d~evL~~AgI~~A~~VViatddd~ 1085 (1207)
.++|+|.|..|+.++..+++.|+.++++|.|++.... ..--.++.-|.. +.+.+.. -.+++|+|+...++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~--~~aD~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~~~~ 75 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIR--NYADEFYCFDVIKEPEKLLE-LSKRVDAVLPVNENLA 75 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTT--TTSSEEEECCTTTCHHHHHH-HHTSSSEEEECCCCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhH--hhCCEEEECCCCcCHHHHHH-HhcCCCEEEECCCChh
Confidence 5889999999999999999999999999999875321 111234444443 4433332 2356777766655543
No 277
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=84.39 E-value=0.67 Score=52.80 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=52.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|+|.|..|+.+++.+++.|++++++|.+++... ......++.+|..|.+.+.+.- ++.|.++...++
T Consensus 3 ~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~ 72 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSPA--GQVADEQIVAGFFDSERIEDLV-KGSDVTTYDLEH 72 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTT--GGGSSEEEECCTTCHHHHHHHH-HTCSEEEESCSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCch--hhhCceEEECCCCCHHHHHHHH-hcCCEEEecccC
Confidence 589999999999999999999999999998765421 1112246678888888776654 677877665543
No 278
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=84.37 E-value=2 Score=49.55 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=56.8
Q ss_pred cccccC-CCchHHHHHHHHHhcC-CCeEeecCChHHHHhhhh----------CCCCEEEecCCCHHHHHhcC-ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRA----------LDLPVYFGDAGSREVLHKVG-AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~g-i~vvVID~D~e~ve~~r~----------~g~~vi~GDatd~evL~~Ag-I~~A~~V 1077 (1207)
.++|.| .|.+|+.+++.|.+.| ..++++++++........ .++.++.||.+|++.+..+- ..+.|.|
T Consensus 37 ~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 116 (399)
T 3nzo_A 37 RFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYV 116 (399)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCSEE
T ss_pred EEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCCEE
Confidence 577888 6899999999999999 799999999876644322 46889999999999887652 3578888
Q ss_pred EEecC
Q 000968 1078 AITLD 1082 (1207)
Q Consensus 1078 Viatd 1082 (1207)
+-+..
T Consensus 117 ih~Aa 121 (399)
T 3nzo_A 117 LNLSA 121 (399)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76543
No 279
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.35 E-value=2.4 Score=46.81 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=51.2
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
..+++|+|.|..|+.++..|.+.|.+++++++++++.+.+.+.+..++ +..+ +.++|.||-+|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~--------l~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP--------KSAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC--------SSCCSEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH--------hccCCEEEEcccCC
Confidence 457999999999999999999999999999999998876654453332 2111 23899999888654
No 280
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=84.18 E-value=0.44 Score=52.70 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=53.6
Q ss_pred cccccCC-CchHHHHHHHHHhc-CCCeEeecCChHHHHhh-hhCCCCEEEecCCCH-HHHHhcCccccCEEEEec
Q 000968 1011 HIILCGF-GRVGQIIAQLLSER-LIPFVALDVRSDRVAIG-RALDLPVYFGDAGSR-EVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~-gi~vvVID~D~e~ve~~-r~~g~~vi~GDatd~-evL~~AgI~~A~~VViat 1081 (1207)
+++|.|. |.+|+.+++.|.+. |++|++++++++..+.. ...++.++.||.+++ +.++++ ++++|.||-+.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~d~vih~A 75 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH-VKKCDVVLPLV 75 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHH-HHHCSEEEECB
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhh-ccCCCEEEEcc
Confidence 4677776 99999999999998 89999999988765543 234678999999984 445443 35778888654
No 281
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=83.98 E-value=0.9 Score=49.34 Aligned_cols=68 Identities=21% Similarity=0.141 Sum_probs=51.0
Q ss_pred ccccCC-CchHHHHHHHHHhcC-CCeEeecCChHHH--HhhhhCCCCEEEecCCCHHHHHhcCcc----ccCEEEEecC
Q 000968 1012 IILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV--AIGRALDLPVYFGDAGSREVLHKVGAE----RACAAAITLD 1082 (1207)
Q Consensus 1012 VIIiG~-GrvG~~Ia~~L~~~g-i~vvVID~D~e~v--e~~r~~g~~vi~GDatd~evL~~AgI~----~A~~VViatd 1082 (1207)
++|.|. |.+|+.+++.|.+.| ..|+++++++... .... +.. +.||.++++.++++--. ++|.||-+..
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~ 77 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence 677776 999999999999999 9999999876542 2222 333 77999999888776332 5888887654
No 282
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=83.96 E-value=7.4 Score=35.91 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=63.7
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-..-+. .-...+..+|+.+|++++++-+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~-~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTMNGFAVKM-HQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT 82 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTCEEEE-ESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCcEEEE-eCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEE
Confidence 4577888887655433 345666553 233455666665566788777665443 3466778888888998888877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......++|++..+...+
T Consensus 83 ~~~~~~~~~~~~~~ga~~~l~Kp~ 106 (126)
T 1dbw_A 83 GHGDVPMAVEAMKAGAVDFIEKPF 106 (126)
T ss_dssp CTTCHHHHHHHHHTTCSEEEESSC
T ss_pred CCCCHHHHHHHHHhCHHHheeCCC
Confidence 64 44677778899998875543
No 283
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=83.95 E-value=1.4 Score=48.85 Aligned_cols=122 Identities=17% Similarity=0.129 Sum_probs=75.3
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
-++.|+|+|.+|+..++.|.+. +..++ +.|.|+++.+.+.+. .+ .+.| -.+.|.. .++|+|++++++...
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~-~~~~--~~~~l~~---~~~D~V~i~tp~~~h- 82 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CV-IESD--WRSVVSA---PEVEAVIIATPPATH- 82 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CE-EESS--THHHHTC---TTCCEEEEESCGGGH-
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-Cc-ccCC--HHHHhhC---CCCCEEEEeCChHHH-
Confidence 4689999999999999999875 55544 889999988766544 33 2322 3444432 468999999987643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|....+ ...+..+..-+..++.
T Consensus 83 ~~~~~~al~~G--k~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 143 (315)
T 3c1a_A 83 AEITLAAIASG--KAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLT 143 (315)
T ss_dssp HHHHHHHHHTT--CEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHH
T ss_pred HHHHHHHHHCC--CcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHH
Confidence 34444443333 456665 3455554444 456776655 2233444444554444
No 284
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.90 E-value=2.7 Score=46.35 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=53.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCCh--H---HHHhhhhC-CCCEEEecCCCHHHHHhcCccc--cCEEEEec
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRS--D---RVAIGRAL-DLPVYFGDAGSREVLHKVGAER--ACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~--e---~ve~~r~~-g~~vi~GDatd~evL~~AgI~~--A~~VViat 1081 (1207)
+++|.| .|.+|+.+++.|.+.|+.|++++++. . ..+.+... ++.++.||.+|++.++++ ++. .|.||-+.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vih~A 81 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRL-ITKYMPDSCFHLA 81 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHH-HHHHCCSEEEECC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHH-HhccCCCEEEECC
Confidence 477787 69999999999999999999998642 1 22333333 478999999999988765 233 88888766
Q ss_pred C
Q 000968 1082 D 1082 (1207)
Q Consensus 1082 d 1082 (1207)
.
T Consensus 82 ~ 82 (347)
T 1orr_A 82 G 82 (347)
T ss_dssp C
T ss_pred c
Confidence 4
No 285
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.87 E-value=0.5 Score=54.11 Aligned_cols=99 Identities=13% Similarity=0.014 Sum_probs=63.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch---
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA--- 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~--- 1086 (1207)
.+++|+|.|.+|+.+++.+...|.+++++|+++++.+.+++.+...+.....+.+.+.+ .+..+|.+|-++..+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~~~~~ 246 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGRRAP 246 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEECCCcCCCCCC
Confidence 57999999999999999999999999999999999887765431111111123333322 23479999988866542
Q ss_pred hHHHHHHHHHhCCCceEEEeeCC
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
.+..-..++.+.|...++--..+
T Consensus 247 ~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 247 ILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCBCHHHHTTSCTTCEEEETTCT
T ss_pred eecCHHHHhhCCCCCEEEEEecC
Confidence 11111233445566555555444
No 286
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=83.64 E-value=0.83 Score=51.86 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=54.8
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
.+-|+|+|.+|+.+++.|...|.++++.|++++. +.....|.. + .+.+.+ +.++|.|+++++....+..+
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~--~---~~l~e~----l~~aDiVil~vp~~~~t~~~ 217 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKAR--Y---MDIDEL----LEKSDIVILALPLTRDTYHI 217 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEE--E---CCHHHH----HHHCSEEEECCCCCTTTTTS
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCce--e---cCHHHH----HhhCCEEEEcCCCChHHHHH
Confidence 5889999999999999999999999999999876 444444432 2 233222 25789999999876332222
Q ss_pred H--HHHHHhCCC
Q 000968 1091 V--WALSKYFPN 1100 (1207)
Q Consensus 1091 ~--l~aR~l~P~ 1100 (1207)
+ .....+.|+
T Consensus 218 i~~~~~~~mk~g 229 (333)
T 2d0i_A 218 INEERVKKLEGK 229 (333)
T ss_dssp BCHHHHHHTBTC
T ss_pred hCHHHHhhCCCC
Confidence 1 223445566
No 287
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=83.63 E-value=0.75 Score=53.58 Aligned_cols=86 Identities=13% Similarity=0.074 Sum_probs=57.2
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh--H
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN--Y 1088 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N--i 1088 (1207)
.+-|+|+|++|+.+++.|...|.++++.|+++...+.....|.... .+.+.+ +.++|.|++.++....+ +
T Consensus 193 tvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~----~~l~el----l~~aDvV~l~~Plt~~t~~l 264 (393)
T 2nac_A 193 HVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH----ATREDM----YPVCDVVTLNCPLHPETEHM 264 (393)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----GGGCSEEEECSCCCTTTTTC
T ss_pred EEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec----CCHHHH----HhcCCEEEEecCCchHHHHH
Confidence 5889999999999999999999999999988655444444454321 223322 35789999998864332 2
Q ss_pred HHHHHHHHhCCCceEE
Q 000968 1089 RTVWALSKYFPNVKTF 1104 (1207)
Q Consensus 1089 ~i~l~aR~l~P~i~II 1104 (1207)
.-...+..+-|+..+|
T Consensus 265 i~~~~l~~mk~gailI 280 (393)
T 2nac_A 265 INDETLKLFKRGAYIV 280 (393)
T ss_dssp BSHHHHTTSCTTEEEE
T ss_pred hhHHHHhhCCCCCEEE
Confidence 2123344555664443
No 288
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=83.51 E-value=1.4 Score=47.06 Aligned_cols=72 Identities=13% Similarity=0.120 Sum_probs=55.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCc------cccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGA------ERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI------~~A~~VViatd 1082 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+...+ .+..++.+|.+|++.++++=- .+.|.+|-...
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag 86 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG 86 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4667764 679999999999999999999999887765543 367888999999987765311 24677776543
No 289
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=83.49 E-value=0.81 Score=51.85 Aligned_cols=72 Identities=11% Similarity=-0.043 Sum_probs=56.8
Q ss_pred cccccCC-CchHHHHHHHHHhcC-CCeEeecCChHHH-Hhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV-AIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~g-i~vvVID~D~e~v-e~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+++|.|. |.+|+.+++.|.+.| .+|+++++++... +.+. ..++.++.||.++++.+.++ ++.+|.||-+...
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL-QDEYDYVFHLATY 109 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC-CSCCSEEEECCCC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH-hhCCCEEEECCCc
Confidence 5788885 999999999999999 9999999876542 2222 34677889999999999876 4588998876643
No 290
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=83.47 E-value=1.1 Score=48.81 Aligned_cols=71 Identities=20% Similarity=0.142 Sum_probs=53.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC--CCCEEEecCCCHHHHHhc------CccccCEEEEe
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKV------GAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~--g~~vi~GDatd~evL~~A------gI~~A~~VVia 1080 (1207)
+.+||.| .+.+|+.+++.|.+.|..|+++|.|++..+...++ +...+.+|.+|++..+++ ...+-|.+|-.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3566766 45599999999999999999999999988776554 355678999998876543 22356666643
No 291
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.46 E-value=1 Score=53.89 Aligned_cols=65 Identities=17% Similarity=0.107 Sum_probs=49.2
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
..++|+|+|.+|+.+++.|...|..|++.|.++.+.+.....+..+ .+.+ .-...+|.++.+++.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-----~~le----e~~~~aDvVi~atG~ 330 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-----LTLE----DVVSEADIFVTTTGN 330 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CCGG----GTTTTCSEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-----CCHH----HHHHhcCEEEeCCCC
Confidence 4688999999999999999999999999999998887776666432 2221 123467777766654
No 292
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=83.36 E-value=0.88 Score=52.90 Aligned_cols=70 Identities=17% Similarity=0.282 Sum_probs=51.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHH-hhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA-IGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve-~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
.++.|+|.|.+|+.+++.|...|. +++++|+++++.+ .++..|..++ +..+ +.+. +..+|.||.+++.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~---l~~~-l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--RFDE---LVDH-LARSDVVVSATAAPH 239 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--CGGG---HHHH-HHTCSEEEECCSSSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--cHHh---HHHH-hcCCCEEEEccCCCC
Confidence 469999999999999999999998 8999999998874 4445565432 1112 2221 257999999997654
No 293
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.23 E-value=3.1 Score=46.46 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=64.3
Q ss_pred cccccCCCchHHHHHHHHHhcCC--CeEeecCChHHHH--h--hhh----CCC-CEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA--I--GRA----LDL-PVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve--~--~r~----~g~-~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
++.|+|.|.+|..++..|...+. +++++|.++++++ . +.. ... .-+.+. +|. ..+..||.||+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~-----~a~~~aDiVVi 75 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-ADY-----SLLKGSEIIVV 75 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-SCG-----GGGTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-CCH-----HHhCCCCEEEE
Confidence 47899999999999999998888 8999999998864 1 111 111 123321 122 34678999999
Q ss_pred ecCCc-----------chhHH----HHHHHHHhCCCceEEEeeCChH
Q 000968 1080 TLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHDID 1111 (1207)
Q Consensus 1080 atddd-----------~~Ni~----i~l~aR~l~P~i~IIaRa~d~~ 1111 (1207)
+.+.+ ..|.. ++..+++.+|+..+++.+ ++-
T Consensus 76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs-NPv 121 (294)
T 1oju_A 76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT-NPM 121 (294)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS-SSH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC-Ccc
Confidence 88654 23533 445677889998777766 443
No 294
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.12 E-value=1 Score=47.76 Aligned_cols=73 Identities=15% Similarity=0.081 Sum_probs=54.3
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh--CCCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA--LDLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~--~g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
..++|.|. |.+|+.+++.|.+.|..+++++++++..+.. +. ..+.++.+|.+|++.++++- ..+.|.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 35677765 7899999999999999999999998765433 22 24567889999998877652 126778
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 92 vi~~Ag 97 (255)
T 1fmc_A 92 LVNNAG 97 (255)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776553
No 295
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=83.05 E-value=1.7 Score=48.17 Aligned_cols=71 Identities=21% Similarity=0.263 Sum_probs=53.8
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHH-Hhhhh-CCCCEEEecCCCHHHHHhcCcc--ccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV-AIGRA-LDLPVYFGDAGSREVLHKVGAE--RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~v-e~~r~-~g~~vi~GDatd~evL~~AgI~--~A~~VViatd 1082 (1207)
+++|.| .|.+|+.+++.|.+.|.+|+++++++... +.+.. .++.++.||.+|++.+.++ ++ +.|.||-+..
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQL-IGDLQPDAVVHTAA 98 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHH-HhccCCcEEEECce
Confidence 577887 69999999999999999999999875431 22222 3677899999999988765 23 3888887654
No 296
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=82.99 E-value=3.3 Score=39.77 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=46.5
Q ss_pred HHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1064 EVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1064 evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+.++...-...+.+++-..-+. .-+..+..+|+.+|++++|+-+... +......++|++.++....
T Consensus 52 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~ 120 (152)
T 3eul_A 52 AALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDS 120 (152)
T ss_dssp HHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCC
Confidence 3444444456788888765443 4467888899999999998877654 4566778999998885543
No 297
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=82.99 E-value=1.4 Score=46.65 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=54.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----CCCCEEEecCCCHHHHHhcCc------cccCEEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVGA------ERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----~g~~vi~GDatd~evL~~AgI------~~A~~VV 1078 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+.... .++.++.+|.++++.++++-- .+.|.+|
T Consensus 8 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 87 (251)
T 1zk4_A 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLV 87 (251)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 466666 5789999999999999999999999876654322 357788999999987765421 2477877
Q ss_pred EecC
Q 000968 1079 ITLD 1082 (1207)
Q Consensus 1079 iatd 1082 (1207)
-...
T Consensus 88 ~~Ag 91 (251)
T 1zk4_A 88 NNAG 91 (251)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6553
No 298
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=82.98 E-value=0.47 Score=52.54 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=52.1
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHH------Hhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEec
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV------AIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~v------e~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViat 1081 (1207)
.+++|.| .|-+|+.+++.|.+.|+.|+++.++++.. ..+. ..++.++.||.+|++.+.++ ++.+|+||-+.
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~Vih~A 88 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAP-IAGCDFVFHVA 88 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHH-HTTCSEEEEES
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHH-HcCCCEEEEeC
Confidence 4688888 69999999999999999999877775431 1121 23567889999998776654 34578877543
No 299
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=82.97 E-value=0.6 Score=53.06 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=50.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCC------------CEEEecCCCHHHHHhcCccccCEEE
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL------------PVYFGDAGSREVLHKVGAERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~------------~vi~GDatd~evL~~AgI~~A~~VV 1078 (1207)
+|.|+|.|.+|..++..|.+.|++|+++|+++++++.+.+.+. .+..- ++++ + -++.+|.||
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~---~-~~~~aDvVi 90 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT--SDVE---K-AYNGAEIIL 90 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE--SCHH---H-HHTTCSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeee--CCHH---H-HHcCCCEEE
Confidence 6999999999999999999999999999999998887765431 11111 2222 1 135789999
Q ss_pred EecCCc
Q 000968 1079 ITLDTP 1084 (1207)
Q Consensus 1079 iatddd 1084 (1207)
+++++.
T Consensus 91 lav~~~ 96 (366)
T 1evy_A 91 FVIPTQ 96 (366)
T ss_dssp ECCCHH
T ss_pred ECCChH
Confidence 998763
No 300
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.94 E-value=1.8 Score=49.16 Aligned_cols=73 Identities=10% Similarity=0.153 Sum_probs=58.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
..++|.|.|.+|...++.++..|..+++++.++++.+.++ +.|...+. |..+.+.+++.. ..+|.++-++..+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~-~~~D~vid~~g~~ 262 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRDQEQMQAAA-GTLDGIIDTVSAV 262 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEE-ETTCHHHHHHTT-TCEEEEEECCSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEE-eccCHHHHHHhh-CCCCEEEECCCcH
Confidence 4789999999999999999999999999999999888776 77765443 556666666553 4789988888765
No 301
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.86 E-value=1.4 Score=49.74 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=54.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCC---hHHHHhhhh-----CCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVR---SDRVAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D---~e~ve~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.+++|+|.|..|+.++..|...|. .+++++++ +++.+.+.+ .+..+...+..+.+-|.++ +.++|.||-+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~-l~~aDiIINa 233 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE-IAESVIFTNA 233 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHTCSEEEEC
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh-hcCCCEEEEC
Confidence 468999999999999999999998 79999999 777665432 2444555555555555432 5689999998
Q ss_pred cCC
Q 000968 1081 LDT 1083 (1207)
Q Consensus 1081 tdd 1083 (1207)
|+-
T Consensus 234 Tp~ 236 (315)
T 3tnl_A 234 TGV 236 (315)
T ss_dssp SST
T ss_pred ccC
Confidence 863
No 302
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=82.84 E-value=0.76 Score=50.93 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=52.2
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHH---Hhhhh-----CCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV---AIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~v---e~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.+++|.| .|-+|+.+++.|.+.|++|+++.++++.. ..+.. .++.++.||.+|++.++++ ++.+|.||-+
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~ 84 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEA-IKGCTGVFHV 84 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHH-HTTCSEEEEC
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHH-HcCCCEEEEe
Confidence 3578888 79999999999999999999888876532 22111 2467889999998877654 3567887754
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 85 A 85 (337)
T 2c29_D 85 A 85 (337)
T ss_dssp C
T ss_pred c
Confidence 3
No 303
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=82.82 E-value=12 Score=35.32 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=43.0
Q ss_pred cccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1072 ERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1072 ~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
...+.|++-..-+. .-+.++..+|+.+|++++|+-+.. .+......++|++.++...+
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~ 126 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPL 126 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSC
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCC
Confidence 56788888776544 346778888999999999887764 45667778999998875543
No 304
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=82.81 E-value=0.51 Score=53.17 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=31.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e 1043 (1207)
||+|||.|..|..+|..|.+.|++|+|+|.++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 699999999999999999999999999998764
No 305
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=82.79 E-value=0.69 Score=53.66 Aligned_cols=110 Identities=13% Similarity=0.136 Sum_probs=69.2
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhH
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni 1088 (1207)
...+.|+|.|..|+.+++.+++.|++++++| +++.....-......+.++..|.+.|.++- ++++.++....+. +.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a-~~~d~i~~e~e~~--~~ 99 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLA-KTCDVVTAEIEHV--DT 99 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHH-TTCSEEEESSSCS--CH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHH-HhCCEEEECCCCC--CH
Confidence 3579999999999999999999999999999 654322111122357889999999987763 4567654433333 33
Q ss_pred HHHHHHHH---hCCCceEEEeeCChHHHH-HHHhCCCC
Q 000968 1089 RTVWALSK---YFPNVKTFVRAHDIDHGL-NLEKAGAT 1122 (1207)
Q Consensus 1089 ~i~l~aR~---l~P~i~IIaRa~d~~~~~-~L~~aGAd 1122 (1207)
..+..+.+ .+|+...+..+.|..... .++++|+.
T Consensus 100 ~~l~~l~~g~~v~p~~~a~~~~~dK~~~k~~l~~~Gip 137 (403)
T 3k5i_A 100 YALEEVASEVKIEPSWQAIRTIQNKFNQKEHLRKYGIP 137 (403)
T ss_dssp HHHHHHTTTSEESSCHHHHHHHTSHHHHHHHHHTTTCC
T ss_pred HHHHHHHcCCccCcCHHHHHHhcCHHHHHHHHHHCCcC
Confidence 33222222 234444455555554433 45666654
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=82.72 E-value=2.8 Score=42.89 Aligned_cols=92 Identities=9% Similarity=0.000 Sum_probs=61.4
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHH----HhcCccccCEEEEecCCc
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVL----HKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL----~~AgI~~A~~VViatddd 1084 (1207)
.+++|.| .|.+|+.+++.+...|..+++++.++++.+.+++.|...+. |..+++.. +..+-...|.++-+...+
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~ 118 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGYGVDVVLNSLAGE 118 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTCCEEEEEECCCTH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEe-eCCcHHHHHHHHHHhCCCCCeEEEECCchH
Confidence 4688999 69999999999999999999999999988878777765443 55544332 222223578887766532
Q ss_pred chhHHHHHHHHHhCCCceEEEe
Q 000968 1085 GANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
......+.+.|.-+++.-
T Consensus 119 ----~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 119 ----AIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp ----HHHHHHHTEEEEEEEEEC
T ss_pred ----HHHHHHHHhccCCEEEEE
Confidence 222333444454455443
No 307
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.57 E-value=1.7 Score=47.32 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=58.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCC-CeEeecCCh-------------------HHHHhh----hh--CCCCEE--EecC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRS-------------------DRVAIG----RA--LDLPVY--FGDA 1060 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~-------------------e~ve~~----r~--~g~~vi--~GDa 1060 (1207)
..+|+|+|.|.+|..+++.|...|+ .++++|.|. .+++.+ ++ .++.+. ..+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 4589999999999999999999998 688998874 233322 11 233332 2222
Q ss_pred CCHHHHHhcCccccCEEEEecCCcchhHHHHHHHHHhC
Q 000968 1061 GSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYF 1098 (1207)
Q Consensus 1061 td~evL~~AgI~~A~~VViatddd~~Ni~i~l~aR~l~ 1098 (1207)
+++.+.+. +.++|.||.++++...-..+...+++.+
T Consensus 108 -~~~~~~~~-~~~~DvVi~~~d~~~~r~~l~~~~~~~~ 143 (251)
T 1zud_1 108 -TGEALKDA-VARADVVLDCTDNMATRQEINAACVALN 143 (251)
T ss_dssp -CHHHHHHH-HHHCSEEEECCSSHHHHHHHHHHHHHTT
T ss_pred -CHHHHHHH-HhcCCEEEECCCCHHHHHHHHHHHHHhC
Confidence 33333322 4578999999988766556666666654
No 308
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=82.57 E-value=1 Score=51.24 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=54.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
.+-|+|+|.+|+.+++.|...|.++++.|++++..+ |.. . ..+.+.+ +.++|.|+++++....+..+
T Consensus 166 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~-~---~~~l~el----l~~aDvVil~vP~~~~t~~l 232 (333)
T 3ba1_A 166 RVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYT-Y---YGSVVEL----ASNSDILVVACPLTPETTHI 232 (333)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSE-E---ESCHHHH----HHTCSEEEECSCCCGGGTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----Cce-e---cCCHHHH----HhcCCEEEEecCCChHHHHH
Confidence 588999999999999999999999999999876421 332 1 1233222 35789999999875332221
Q ss_pred --HHHHHHhCCCceEE
Q 000968 1091 --VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1091 --~l~aR~l~P~i~II 1104 (1207)
....+.+.|+..+|
T Consensus 233 i~~~~l~~mk~gailI 248 (333)
T 3ba1_A 233 INREVIDALGPKGVLI 248 (333)
T ss_dssp BCHHHHHHHCTTCEEE
T ss_pred hhHHHHhcCCCCCEEE
Confidence 12344556665444
No 309
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=82.57 E-value=1.6 Score=46.90 Aligned_cols=72 Identities=14% Similarity=-0.032 Sum_probs=54.6
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC---CCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~---g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
+++|.| .|.+|+.+++.|.+.|..|++++++++..+..... +..++.+|.+|++.++++=- .+.|.+|-.
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~ 93 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCAN 93 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 466666 46799999999999999999999998877654322 57788999999988765411 156777765
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 94 Ag 95 (263)
T 3ak4_A 94 AG 95 (263)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 310
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.55 E-value=1.1 Score=50.59 Aligned_cols=68 Identities=16% Similarity=0.096 Sum_probs=48.9
Q ss_pred cccccCCCchHHHHHHHHHhcC-------CCeEeecCChH-----HHHhhhhCCC------------CEEEecCCCHHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL-------IPFVALDVRSD-----RVAIGRALDL------------PVYFGDAGSREVL 1066 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g-------i~vvVID~D~e-----~ve~~r~~g~------------~vi~GDatd~evL 1066 (1207)
++.|+|.|.+|..++..|.+.| .+|+++|++++ ..+.++..+. .+..- ++.+
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 85 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV--PDVV-- 85 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE--SSHH--
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE--cCHH--
Confidence 6899999999999999999988 89999999988 7776653221 11111 2221
Q ss_pred HhcCccccCEEEEecCCc
Q 000968 1067 HKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1067 ~~AgI~~A~~VViatddd 1084 (1207)
+ -+..+|.|+++++..
T Consensus 86 -~-~~~~aD~Vilav~~~ 101 (354)
T 1x0v_A 86 -Q-AAEDADILIFVVPHQ 101 (354)
T ss_dssp -H-HHTTCSEEEECCCGG
T ss_pred -H-HHcCCCEEEEeCCHH
Confidence 1 135789999999764
No 311
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=82.55 E-value=1.4 Score=48.54 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=53.6
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHH--hhhh----CCCCEEEecCCCHHHHHhcCcc-ccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVA--IGRA----LDLPVYFGDAGSREVLHKVGAE-RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve--~~r~----~g~~vi~GDatd~evL~~AgI~-~A~~VViatd 1082 (1207)
+++|.|. |.+|+.+++.|.+.|++|++++++++..+ .+.. .++.++.||.+|++.+.++=-. +.|.||-+..
T Consensus 5 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 84 (345)
T 2z1m_A 5 RALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAA 84 (345)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECCC
Confidence 5788886 99999999999999999999999865421 1221 2567889999999887665211 4588877654
No 312
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=82.45 E-value=1.6 Score=46.48 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=52.5
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-------------CCCCEEEecCCCHHHHHhcCc-----
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------------LDLPVYFGDAGSREVLHKVGA----- 1071 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-------------~g~~vi~GDatd~evL~~AgI----- 1071 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+...+ ..+.++.+|.+|++.++++=-
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQAC 88 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHH
Confidence 466665 5789999999999999999999999887654421 346788999999987765411
Q ss_pred -ccc-CEEEEec
Q 000968 1072 -ERA-CAAAITL 1081 (1207)
Q Consensus 1072 -~~A-~~VViat 1081 (1207)
.+. |.+|-..
T Consensus 89 ~g~i~d~vi~~A 100 (264)
T 2pd6_A 89 FSRPPSVVVSCA 100 (264)
T ss_dssp HSSCCSEEEECC
T ss_pred hCCCCeEEEECC
Confidence 123 7777654
No 313
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=82.36 E-value=8.2 Score=36.06 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ +..|+.+.. -.+-.+.+....-...+.+++-..-+. .-...+..+|+.+|++++|+.+
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFEGYEVEI-AATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVT 82 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEE
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCceEEE-eCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEe
Confidence 3577777777654333 345665542 223345555555456788877665443 3466777888888999988877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......++|++..+...+
T Consensus 83 ~~~~~~~~~~~~~~ga~~~l~KP~ 106 (132)
T 3crn_A 83 GYASLENSVFSLNAGADAYIMKPV 106 (132)
T ss_dssp SCCCHHHHHHHHHTTCSEEEESSC
T ss_pred ccccHHHHHHHHhccchhhccCCC
Confidence 54 45667778899998885543
No 314
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.34 E-value=1.4 Score=48.37 Aligned_cols=105 Identities=10% Similarity=-0.002 Sum_probs=66.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh-
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN- 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N- 1087 (1207)
.++.|+|.|.+|+.++..|.+.|.+++++|+++++.+.+... |..+ -+ + +. .-+.++|.||.+++.....
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~---~~-~~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--S---PE-EVIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--C---GG-GTGGGCSEEEECSSTTSSTT
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--h---HH-hhhcCCCEEEEeCCCCCCCC
Confidence 368999999999999999999999999999999988766433 4221 11 1 11 1346899999999876421
Q ss_pred HHHHHHHHHhCCCceEEEeeC-ChHHHHHHHhCCCC
Q 000968 1088 YRTVWALSKYFPNVKTFVRAH-DIDHGLNLEKAGAT 1122 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~-d~~~~~~L~~aGAd 1122 (1207)
..-......+.|+..++--+. ........++.|+.
T Consensus 202 ~~~~i~~~~l~~g~~viDv~~~~t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 202 DPEIFNYDLIKKDHVVVDIIYKETKLLKKAKEKGAK 237 (275)
T ss_dssp CCCSSCGGGCCTTSEEEESSSSCCHHHHHHHHTTCE
T ss_pred CCCCCCHHHcCCCCEEEEcCCChHHHHHHHHHCcCE
Confidence 000001122344433333333 23345666778885
No 315
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=82.26 E-value=2.1 Score=48.96 Aligned_cols=88 Identities=14% Similarity=0.115 Sum_probs=62.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCC-CeEeecCChH-------------------HHHhh----hh--CC--CCEEEecC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSD-------------------RVAIG----RA--LD--LPVYFGDA 1060 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e-------------------~ve~~----r~--~g--~~vi~GDa 1060 (1207)
..||+|+|.|..|..+++.|...|+ .++++|.|.- +++.+ +. .+ +..+..+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i 197 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI 197 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence 4689999999999999999999998 6899998841 22212 21 12 33455555
Q ss_pred CCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhC
Q 000968 1061 GSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYF 1098 (1207)
Q Consensus 1061 td~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~ 1098 (1207)
+....+.. +..+|.||.++|+.. ....+-..+++.+
T Consensus 198 ~~~~~~~~--~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~ 234 (353)
T 3h5n_A 198 NDYTDLHK--VPEADIWVVSADHPFNLINWVNKYCVRAN 234 (353)
T ss_dssp CSGGGGGG--SCCCSEEEECCCCSTTHHHHHHHHHHHTT
T ss_pred CchhhhhH--hccCCEEEEecCChHHHHHHHHHHHHHhC
Confidence 55543554 889999999998877 5555555666665
No 316
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=82.11 E-value=1 Score=49.12 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=53.1
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh----C---CCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA----L---DLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~----~---g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
..++|.|. |.+|+.+++.|.+.|..|++++++++..+.... . .+.++.+|.+|++.++++- ....|
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 108 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35777776 789999999999999999999999887654422 1 3577889999988765431 12567
Q ss_pred EEEEe
Q 000968 1076 AAAIT 1080 (1207)
Q Consensus 1076 ~VVia 1080 (1207)
.+|-.
T Consensus 109 ~li~n 113 (286)
T 1xu9_A 109 MLILN 113 (286)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77744
No 317
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=82.00 E-value=1.5 Score=48.33 Aligned_cols=73 Identities=18% Similarity=0.053 Sum_probs=55.2
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHH----Hhh---hhCCCCEEEecCCCHHHHHhcCc-cccCEEEEe
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV----AIG---RALDLPVYFGDAGSREVLHKVGA-ERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~v----e~~---r~~g~~vi~GDatd~evL~~AgI-~~A~~VVia 1080 (1207)
.+++|.| .|-+|+.+++.|.+.|.+|++++++++.. +.. ...++.++.+|.+|++.+.++=- .+.|.||-+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 3678887 58999999999999999999999875432 222 13478899999999998876522 267887766
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 86 A~ 87 (341)
T 3enk_A 86 AA 87 (341)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 318
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.96 E-value=1.1 Score=50.58 Aligned_cols=68 Identities=9% Similarity=0.131 Sum_probs=57.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
+.++|.|.|.+|...++.++..|..|++++.++++.+.+++.|...++ ++++.+.+ .+|.++-++..+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~----~~D~vid~~g~~ 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE----ELDFIISTIPTH 245 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS----CEEEEEECCCSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc----CCCEEEECCCcH
Confidence 468899999999999999999999999999999999999999988777 45554443 688888887766
No 319
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=81.94 E-value=1.3 Score=47.58 Aligned_cols=71 Identities=15% Similarity=0.090 Sum_probs=53.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----CCCCEEEecCCCHHHHHhcCc------cccCEEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVGA------ERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----~g~~vi~GDatd~evL~~AgI------~~A~~VV 1078 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+.... .++.++.+|.+|++.++++-- .+.|.+|
T Consensus 18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 97 (278)
T 2bgk_A 18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMF 97 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 466665 5789999999999999999999999876544321 156788999999998765521 2578877
Q ss_pred Eec
Q 000968 1079 ITL 1081 (1207)
Q Consensus 1079 iat 1081 (1207)
-..
T Consensus 98 ~~A 100 (278)
T 2bgk_A 98 GNV 100 (278)
T ss_dssp ECC
T ss_pred ECC
Confidence 544
No 320
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=81.92 E-value=1.1 Score=49.80 Aligned_cols=107 Identities=11% Similarity=-0.018 Sum_probs=65.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh-
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN- 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N- 1087 (1207)
.+++|+|.|.+|+.++..|.+.|. +++++++++++.+.+... +..+ ..+.+.++ +.++|.||.+|+.....
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~~~~-----~~~~~~~~-~~~aDiVInaTp~Gm~~~ 190 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-INKI-----NLSHAESH-LDEFDIIINTTPAGMNGN 190 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-CEEE-----CHHHHHHT-GGGCSEEEECCC------
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-cccc-----cHhhHHHH-hcCCCEEEECccCCCCCC
Confidence 468999999999999999999998 899999999887665432 2221 22334433 67899999888653211
Q ss_pred HHHHHHHHHhCCCceEEEeeCCh---HHHHHHHhCCCCe
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDI---DHGLNLEKAGATA 1123 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~aGAd~ 1123 (1207)
.........+.|..-++=-++++ ......++.|+..
T Consensus 191 ~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~~ 229 (277)
T 3don_A 191 TDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPI 229 (277)
T ss_dssp -CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCCE
T ss_pred CcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCEE
Confidence 00000112233443333334444 3455667889853
No 321
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.80 E-value=1.3 Score=49.12 Aligned_cols=110 Identities=7% Similarity=-0.033 Sum_probs=65.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhC-C--CCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRAL-D--LPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~-g--~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
.+++|+|.|..|+.++..|.+.|. +++++++++++.+.+.+. + ..+-..+ +.++. .++|.||.+|+...
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~------~~~l~-~~aDiIInaTp~gm 199 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA------FEQLK-QSYDVIINSTSASL 199 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE------GGGCC-SCEEEEEECSCCCC
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee------HHHhc-CCCCEEEEcCcCCC
Confidence 468999999999999999999997 899999999887665321 1 0122222 12222 68999999987753
Q ss_pred hhHHHHHHHHHhCCCceEEEeeCCh---HHHHHHHhCCCCeeec
Q 000968 1086 ANYRTVWALSKYFPNVKTFVRAHDI---DHGLNLEKAGATAVVP 1126 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~aGAd~VI~ 1126 (1207)
..-........+.|..-++=-++++ ......++.|+..++.
T Consensus 200 ~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 200 DGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAID 243 (281)
T ss_dssp ----CSCCGGGEEEEEEEEESCCCSSCCHHHHHHHHTTCSEEEC
T ss_pred CCCCCCCCHHHhCcCCEEEEecCCCccCHHHHHHHHCCCCEEEC
Confidence 2210000111122332233333444 3445667889875553
No 322
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=81.72 E-value=0.96 Score=49.50 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=51.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChH-HHHhhhhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD-RVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e-~ve~~r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatd 1082 (1207)
+++|.|. |-+|+.+++.|.+.|++|++++++.. ..+.. ..++.++.||.++++.++++=- ...+.|+-+..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 3677775 89999999999999999999987432 21111 2467889999999988766511 15677776553
No 323
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=81.71 E-value=11 Score=34.69 Aligned_cols=95 Identities=12% Similarity=0.073 Sum_probs=62.3
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh-HHHHHHHHHh--CCCceEEEe
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALSKY--FPNVKTFVR 1106 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N-i~i~l~aR~l--~P~i~IIaR 1106 (1207)
.+.++|.|+...+.+ +..|+.++.- .+-.+.++...-.+.+.+++-..-+..+ +..+..+|+. +|++++|+-
T Consensus 4 ~ILivdd~~~~~~~l~~~l~~~g~~v~~~-~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~ 82 (122)
T 3gl9_A 4 KVLLVDDSAVLRKIVSFNLKKEGYEVIEA-ENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVL 82 (122)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCcEEEEe-CCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEE
Confidence 467777777654433 3456666532 3345566666667788888866655433 5666777665 477888877
Q ss_pred eC--ChHHHHHHHhCCCCeeecCCc
Q 000968 1107 AH--DIDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~--d~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+. +.+......++|++..+..-+
T Consensus 83 s~~~~~~~~~~~~~~Ga~~~l~KP~ 107 (122)
T 3gl9_A 83 TAKGGEEDESLALSLGARKVMRKPF 107 (122)
T ss_dssp ESCCSHHHHHHHHHTTCSEEEESSC
T ss_pred ecCCchHHHHHHHhcChhhhccCCC
Confidence 75 456777788999998885543
No 324
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=81.60 E-value=1.2 Score=47.62 Aligned_cols=71 Identities=14% Similarity=-0.062 Sum_probs=52.8
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+...+ ....++.+|.+|++.++++= ..+.|.+|-.
T Consensus 8 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~ 87 (253)
T 1hxh_A 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNN 87 (253)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4667664 679999999999999999999999887665432 24567889999998765431 1245777765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 88 A 88 (253)
T 1hxh_A 88 A 88 (253)
T ss_dssp C
T ss_pred C
Confidence 4
No 325
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=81.56 E-value=2.6 Score=50.32 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=52.7
Q ss_pred cccccCCCchHHHHHHHHHhc-CC-CeEeecCChH----HHHhhhhCCCCEE-EecCCCHHHHH-------------hcC
Q 000968 1011 HIILCGFGRVGQIIAQLLSER-LI-PFVALDVRSD----RVAIGRALDLPVY-FGDAGSREVLH-------------KVG 1070 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~-gi-~vvVID~D~e----~ve~~r~~g~~vi-~GDatd~evL~-------------~Ag 1070 (1207)
++.|+|.|.+|..++..|.+. |+ +|+++|.|++ +++.+++...++- + ++.-++.+. ...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~-e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGE-EPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCC-GGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCcccc-CCCHHHHHHhhcccCCeEEeCcHHH
Confidence 588999999999999999999 99 9999999999 9988765332220 0 000001110 123
Q ss_pred ccccCEEEEecCCcc
Q 000968 1071 AERACAAAITLDTPG 1085 (1207)
Q Consensus 1071 I~~A~~VViatddd~ 1085 (1207)
+.+||.++++++++.
T Consensus 99 ~~~aDvViiaVptp~ 113 (478)
T 3g79_A 99 ISELDAVTLAIQTPF 113 (478)
T ss_dssp GGGCSEEEECCCCCC
T ss_pred HhcCCEEEEecCCch
Confidence 678999999987763
No 326
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=81.55 E-value=1.3 Score=55.19 Aligned_cols=114 Identities=14% Similarity=0.093 Sum_probs=78.0
Q ss_pred ccccccccccCCCch------HHHHHHHHHhcCC------CeEeecC-ChHHHH--hhhhC-CCCEEEecCCCHHHHHhc
Q 000968 1006 DDLQDHIILCGFGRV------GQIIAQLLSERLI------PFVALDV-RSDRVA--IGRAL-DLPVYFGDAGSREVLHKV 1069 (1207)
Q Consensus 1006 ~~lk~hVIIiG~Grv------G~~Ia~~L~~~gi------~vvVID~-D~e~ve--~~r~~-g~~vi~GDatd~evL~~A 1069 (1207)
..+++|+|+|++|.. =+..+--|++.+. ++|++-. ++-+.+ .+++. .+-++.|.+....-|+++
T Consensus 374 ~~~~~HivvC~~~~~~s~~~gl~~fvmpLRasn~~~~elk~IV~lg~~~~~~~ew~~l~nfp~iy~~~Gspl~~~dL~~~ 453 (726)
T 3mt5_A 374 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAV 453 (726)
T ss_dssp SCCCSCEEEEEECCTTSCCCCTHHHHTGGGBTTSCGGGCCCEEEEECHHHHHHHHHHHTTSSSEEEEESCTTCHHHHHHT
T ss_pred hcccCcEEEEEecCCCCcchhhhhheeecccccCCHhHcCCEEEECCCccCHHHHHHHhcCCceEEecCCcCChHhHHHh
Confidence 478999999999885 4677777776554 3555433 333322 22222 456778999999999999
Q ss_pred CccccCEEEEecCC----------cchhHHHHHHHHH------------------------------------------h
Q 000968 1070 GAERACAAAITLDT----------PGANYRTVWALSK------------------------------------------Y 1097 (1207)
Q Consensus 1070 gI~~A~~VViatdd----------d~~Ni~i~l~aR~------------------------------------------l 1097 (1207)
||..|+..|+.... |...+..++.+|. .
T Consensus 454 ~i~~c~~cvils~~~~~~~~~~l~D~e~ila~lni~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (726)
T 3mt5_A 454 NINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITT 533 (726)
T ss_dssp TGGGCSEEEEEECC----------CHHHHHHHHHHHTCEEC-----------------------------------CCEE
T ss_pred CHhhCCEEEEecCCCCCcCCcccchhhhhhhhhcccccccccccccccccccccccccccccccccCccchhhhcccccc
Confidence 99999999888642 2233333433333 3
Q ss_pred CCCceEEEeeCChHHHHHHHhC
Q 000968 1098 FPNVKTFVRAHDIDHGLNLEKA 1119 (1207)
Q Consensus 1098 ~P~i~IIaRa~d~~~~~~L~~a 1119 (1207)
++++++|..-.++.+++-|...
T Consensus 534 ~~~i~iitEL~~~sni~fl~~~ 555 (726)
T 3mt5_A 534 GVNIPIITELVNDTNVQFLDQD 555 (726)
T ss_dssp GGGSCEEEEESCGGGGTTSCSS
T ss_pred cCCCceEEEecCCccceeeeec
Confidence 5677899999999888877653
No 327
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=81.55 E-value=2.8 Score=41.41 Aligned_cols=94 Identities=20% Similarity=0.159 Sum_probs=61.2
Q ss_pred cCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-------CCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1015 CGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1015 iG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-------g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
||.|.++..+++ .+..++.+|.+++.++.++.. ++.++.+|..+ .+.. ...|.|++... ..-
T Consensus 44 ~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~---~~~D~i~~~~~--~~~ 112 (183)
T 2yxd_A 44 CGSGGMTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDK---LEFNKAFIGGT--KNI 112 (183)
T ss_dssp CCCSHHHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGG---CCCSEEEECSC--SCH
T ss_pred CCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccC---CCCcEEEECCc--ccH
Confidence 677777776666 678999999999988766532 46788888765 2322 57888877655 222
Q ss_pred HHHHHHHHHhCCCceEEEeeCChHH----HHHHHhCC
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDIDH----GLNLEKAG 1120 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~~~----~~~L~~aG 1120 (1207)
......+++. |+-.++....+... ...+++.|
T Consensus 113 ~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 113 EKIIEILDKK-KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp HHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcC
Confidence 3344455566 88777777765543 33445555
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.49 E-value=1.9 Score=49.13 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=59.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
+.++|.|.|.+|...++.++..|..+++++.++++.+.+++.|...++ |..+++..++.. ..+|.++-++..+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~-~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVV-NSRNADEMAAHL-KSFDFILNTVAAP 268 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEE-ETTCHHHHHTTT-TCEEEEEECCSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEe-ccccHHHHHHhh-cCCCEEEECCCCH
Confidence 468999999999999999999999999999999999988888876554 455666565554 5788888888765
No 329
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=81.40 E-value=1.5 Score=47.37 Aligned_cols=73 Identities=16% Similarity=0.057 Sum_probs=55.4
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHH-HhhhhCCCCEEEecCCCHHHHHhcC------ccccCEEEEec
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRV-AIGRALDLPVYFGDAGSREVLHKVG------AERACAAAITL 1081 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~v-e~~r~~g~~vi~GDatd~evL~~Ag------I~~A~~VViat 1081 (1207)
..++|.|. |-+|+.+++.|.+.|..|++++++++.. +.++..+..++.+|.++++.++++- ..+.|.+|-..
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34666665 6799999999999999999999997654 4445567899999999998775432 13567777654
Q ss_pred C
Q 000968 1082 D 1082 (1207)
Q Consensus 1082 d 1082 (1207)
.
T Consensus 108 g 108 (260)
T 3gem_A 108 S 108 (260)
T ss_dssp C
T ss_pred C
Confidence 3
No 330
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.40 E-value=1.4 Score=47.41 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=53.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh----C--CCCEEEecCCCHHHHHhcCc------cccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA----L--DLPVYFGDAGSREVLHKVGA------ERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~----~--g~~vi~GDatd~evL~~AgI------~~A~~V 1077 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+.... . .+.++.+|.+|++.++++=- .+.|.+
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 87 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDIL 87 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4667765 679999999999999999999999887765432 2 45678899999987765411 256777
Q ss_pred EEecC
Q 000968 1078 AITLD 1082 (1207)
Q Consensus 1078 Viatd 1082 (1207)
|-...
T Consensus 88 v~nAg 92 (257)
T 3imf_A 88 INNAA 92 (257)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76543
No 331
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=81.28 E-value=1.9 Score=49.20 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=51.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|++|+.+++.|...|.++++.|++++.. .+.. + ..+.+-+ +.++|.|+++++....+..
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~--~--~~sl~el----l~~aDvVil~vP~t~~t~~ 238 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----VDWI--A--HQSPVDL----ARDSDVLAVCVAASAATQN 238 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----SCCE--E--CSSHHHH----HHTCSEEEECC--------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----cCce--e--cCCHHHH----HhcCCEEEEeCCCCHHHHH
Confidence 357899999999999999999999999999887541 1211 1 1232222 3578999999886544433
Q ss_pred H--HHHHHHhCCCceEEE
Q 000968 1090 T--VWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~IIa 1105 (1207)
+ ......+.|+..+|-
T Consensus 239 li~~~~l~~mk~gailIN 256 (340)
T 4dgs_A 239 IVDASLLQALGPEGIVVN 256 (340)
T ss_dssp --CHHHHHHTTTTCEEEE
T ss_pred HhhHHHHhcCCCCCEEEE
Confidence 3 344555666654443
No 332
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=81.25 E-value=6.9 Score=36.55 Aligned_cols=96 Identities=7% Similarity=0.074 Sum_probs=58.2
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccc-cCEEEEecCCc-chhHHHHHHHHHh-CCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDTP-GANYRTVWALSKY-FPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~-A~~VViatddd-~~Ni~i~l~aR~l-~P~i~IIa 1105 (1207)
..++++|.|+...+.+ +..|+.++.- .+..+.+....-.. .+.+++-..-+ ..-+..+..+|+. +|++++|+
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~ 86 (136)
T 3hdv_A 8 PLVLVVDDNAVNREALILYLKSRGIDAVGA-DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIV 86 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCCEEEE-SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHHcCceEEEe-CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEE
Confidence 4566666665544322 3345555442 22233333332233 67777766543 3446778888887 78889888
Q ss_pred eeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
-+.. .+......++|++.++..-+
T Consensus 87 ~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (136)
T 3hdv_A 87 VSGDTDVEEAVDVMHLGVVDFLLKPV 112 (136)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred EeCCCChHHHHHHHhCCcceEEeCCC
Confidence 7765 45677788999998885543
No 333
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.21 E-value=5.6 Score=47.42 Aligned_cols=90 Identities=11% Similarity=0.048 Sum_probs=59.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----------CCCC-----------EEEecCCCHHHHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----------LDLP-----------VYFGDAGSREVLH 1067 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----------~g~~-----------vi~GDatd~evL~ 1067 (1207)
.+|-|+|.|.+|..|+..|...|++|+++|.|++.++.+++ .|.. +.. .++. +
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~--~~~~---~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP--VTDI---H 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE--ECCG---G
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE--eCCH---H
Confidence 36889999999999999999999999999999998877543 2310 111 1122 2
Q ss_pred hcCccccCEEEEecCCcchhH-HHHHHHHHhCCCceEEEe
Q 000968 1068 KVGAERACAAAITLDTPGANY-RTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1068 ~AgI~~A~~VViatddd~~Ni-~i~l~aR~l~P~i~IIaR 1106 (1207)
.+.+||.||.++.++..-. .+...+....+.-.|++.
T Consensus 81 --~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 81 --ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp --GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 3678999999998764332 222334344333245543
No 334
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=81.15 E-value=7 Score=39.24 Aligned_cols=97 Identities=16% Similarity=0.130 Sum_probs=64.9
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
...+.+||.|+...+.+ ...|+.+.. -.+-.+.++...-...+.|++-..-+. .-+..+..+|+.+|+++||+-
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~l 85 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGYAVRQ-AHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVL 85 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEE-ECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCCEEEE-eCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEE
Confidence 35677788777655433 345665532 223345666666677888877654433 347788889999999999887
Q ss_pred eCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1107 AHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+.. .+......++||+..+..-+
T Consensus 86 t~~~~~~~~~~a~~~Ga~~~l~KP~ 110 (184)
T 3rqi_A 86 TGYASIATAVQAVKDGADNYLAKPA 110 (184)
T ss_dssp ESSCCHHHHHHHHHHTCSEEEESSC
T ss_pred eCCCCHHHHHHHHHhCHHHheeCCC
Confidence 765 45577788999988775443
No 335
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=81.10 E-value=2 Score=47.85 Aligned_cols=122 Identities=21% Similarity=0.144 Sum_probs=74.7
Q ss_pred cccccCCCchHH-HHHHHHHhc-CCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1011 HIILCGFGRVGQ-IIAQLLSER-LIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1011 hVIIiG~GrvG~-~Ia~~L~~~-gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
++.|+|+|.+|+ ..++.|... +..+++.|.|+++.+.+. ..|.+..+.| ..+.| -.++|+|++++++...
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~--~~~~l----~~~~D~V~i~tp~~~h- 76 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTD--YRDVL----QYGVDAVMIHAATDVH- 76 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSS--TTGGG----GGCCSEEEECSCGGGH-
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccC--HHHHh----hcCCCEEEEECCchhH-
Confidence 578999999998 488988764 667779999999887654 4465532323 23333 2578999999987643
Q ss_pred HHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.+....+ ++.|....+ ...+..+..-+..++.
T Consensus 77 ~~~~~~al~~G--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 137 (323)
T 1xea_A 77 STLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELA 137 (323)
T ss_dssp HHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHH
T ss_pred HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHh
Confidence 33333333333 346654 3454444443 456776655 2233445555555554
No 336
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=81.10 E-value=1.3 Score=52.70 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=63.9
Q ss_pred ccccccccccCCCchHHHHHHHHHhc-CC---CeEeecCChHHHHhhhhCCCCEEEecCCCH---HHHHhcCccccCEEE
Q 000968 1006 DDLQDHIILCGFGRVGQIIAQLLSER-LI---PFVALDVRSDRVAIGRALDLPVYFGDAGSR---EVLHKVGAERACAAA 1078 (1207)
Q Consensus 1006 ~~lk~hVIIiG~GrvG~~Ia~~L~~~-gi---~vvVID~D~e~ve~~r~~g~~vi~GDatd~---evL~~AgI~~A~~VV 1078 (1207)
..++.+|+|+|+|.+|+.+++.|.+. ++ .++++|.+....+.....|..+..-+.+.. +++.++ +.+.|.||
T Consensus 10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aL-l~~~DvVI 88 (480)
T 2ph5_A 10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGST-LEENDFLI 88 (480)
T ss_dssp BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGG-CCTTCEEE
T ss_pred ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHH-hcCCCEEE
Confidence 35677899999999999999999775 45 699999886653333344666666655444 334434 45556655
Q ss_pred EecCCcchhHHHHHHHHHhCC
Q 000968 1079 ITLDTPGANYRTVWALSKYFP 1099 (1207)
Q Consensus 1079 iatddd~~Ni~i~l~aR~l~P 1099 (1207)
-...+..|+.++..+.+..-
T Consensus 89 -N~s~~~~~l~Im~acleaGv 108 (480)
T 2ph5_A 89 -DVSIGISSLALIILCNQKGA 108 (480)
T ss_dssp -ECCSSSCHHHHHHHHHHHTC
T ss_pred -ECCccccCHHHHHHHHHcCC
Confidence 45566688888888888764
No 337
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=81.08 E-value=13 Score=42.14 Aligned_cols=73 Identities=21% Similarity=0.335 Sum_probs=47.7
Q ss_pred hHHhHHHHHHHHHHcCccChhhhcc---chhhHHHHHHHHHHHHHHHHHHHHHhhCcchhhhhhhhhh---cCCCcchhh
Q 000968 872 PYRGLLLGLFFMTVGMSIDPKLLLS---NFPVITGALGLLIGGKTILVALVGRLFGVSVISAIRTGLL---LAPGGEFAF 945 (1207)
Q Consensus 872 ~~~~~flplFFv~IGm~Idl~~L~~---~~~~illlllllll~K~l~v~l~~~l~g~~~real~lGL~---La~rGe~al 945 (1207)
+.-...+.+.|...|+.+++..+.. +|...+..++.-++..++..+..++.++.+.. +..|+. .+|.|..+.
T Consensus 43 ~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~Pll~~~l~~~~~l~~~--~~~Glil~~~~P~~~~s~ 120 (332)
T 3zux_A 43 PYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAE--IAVGVILVGCCPGGTASN 120 (332)
T ss_dssp GGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH--HHHHHHHHHHSCCCTHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCCChH--HHHHHHHHhcCCchhHHH
Confidence 3344566677778899999888763 55555555566677788888888888776543 333332 456666655
Q ss_pred H
Q 000968 946 V 946 (1207)
Q Consensus 946 V 946 (1207)
+
T Consensus 121 v 121 (332)
T 3zux_A 121 V 121 (332)
T ss_dssp H
T ss_pred H
Confidence 4
No 338
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=81.06 E-value=6.9 Score=40.31 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=41.4
Q ss_pred ccCEEEEecCCcchh-HHHHHHHHHh----CCCceEEEeeCC---hHHHHHHHhCCCCeeecCCc
Q 000968 1073 RACAAAITLDTPGAN-YRTVWALSKY----FPNVKTFVRAHD---IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1073 ~A~~VViatddd~~N-i~i~l~aR~l----~P~i~IIaRa~d---~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
..+.|++-..-+..| +.++..+|+. +|+++||+.+.. .+......++|++.++..-+
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~ 183 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSL 183 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcH
Confidence 678888876555433 6677777775 688888888764 36777788999998875544
No 339
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=81.01 E-value=0.6 Score=52.10 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=54.8
Q ss_pred cccccC-CCchHHHHHHHHHhcC-----CCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhc--CccccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERL-----IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~g-----i~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~A--gI~~A~~VViatd 1082 (1207)
+++|.| .|.+|+.+++.|.+.| ++|+++++++.... ....++.++.||.+|++.+.++ +..++|.||-+..
T Consensus 3 ~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 477777 5999999999999999 89999998865432 2234788999999999988764 2223888887754
No 340
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=80.99 E-value=3.1 Score=46.38 Aligned_cols=127 Identities=16% Similarity=0.114 Sum_probs=76.7
Q ss_pred cccccC-CCchHHHHHHHHHhcCC--CeEeecC--ChHHHHh----hhh-----CCCCEEEecCCCHHHHHhcCccccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLI--PFVALDV--RSDRVAI----GRA-----LDLPVYFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi--~vvVID~--D~e~ve~----~r~-----~g~~vi~GDatd~evL~~AgI~~A~~ 1076 (1207)
++.|+| .|.+|+.++..|...+. +++++|. ++++.+. +.+ .+.. +.++ +. .....||.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-v~~~--~~-----~a~~~aDv 73 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQG--GY-----EDTAGSDV 73 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEEC--CG-----GGGTTCSE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcE-EEeC--CH-----HHhCCCCE
Confidence 578999 99999999999987765 5888999 8765432 111 1222 3332 22 23678999
Q ss_pred EEEecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHHH--HHH-HhCCCC--eeecC-CcHHHHHH
Q 000968 1077 AAITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDHG--LNL-EKAGAT--AVVPE-TLEPSLQL 1135 (1207)
Q Consensus 1077 VViatddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~--~~L-~~aGAd--~VI~p-~~eaal~L 1135 (1207)
||++...+ ..|. .++..+++.+|+..+++- .++-+. ..+ +..|.. .|+-- +..-..++
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~-SNPv~~~~~~~~~~~~~p~~rviG~gt~Ld~~r~ 152 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT-SNPVDLLNRHLYEAGDRSREQVIGFGGRLDSARF 152 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC-CSSHHHHHHHHHHHSSSCGGGEEECCHHHHHHHH
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe-CChHHHHHHHHHHHcCCCHHHeeecccchhHHHH
Confidence 99988644 2333 345667778899877774 555432 233 344443 66644 44334455
Q ss_pred HHHHHHHcCCC
Q 000968 1136 AAAVLAQAKLP 1146 (1207)
Q Consensus 1136 a~~iL~~lg~~ 1146 (1207)
-..+-+.++++
T Consensus 153 ~~~la~~l~v~ 163 (303)
T 1o6z_A 153 RYVLSEEFDAP 163 (303)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHhCcC
Confidence 55554544443
No 341
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.84 E-value=1.9 Score=46.52 Aligned_cols=72 Identities=8% Similarity=0.034 Sum_probs=53.5
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh---CCCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA---LDLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~---~g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
.++|.| .+-+|+.+++.|.+.|..|++++++++..+.. +. ..+.++.+|.+|++.++++= ..+.|.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV 91 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 466666 56799999999999999999999998876543 22 24677889999998876541 125677
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 92 lvnnAg 97 (262)
T 3pk0_A 92 VCANAG 97 (262)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776543
No 342
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=80.76 E-value=1.3 Score=50.60 Aligned_cols=86 Identities=15% Similarity=0.065 Sum_probs=57.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh--
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N-- 1087 (1207)
..+-|+|+|++|+.+++.|+..|.+|++.|++++. ....+... .+.+.+ +.+||.|++.++....+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~-----~~l~el----l~~aDvV~l~~Plt~~t~~ 216 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTY-----TDFDTV----LKEADIVSLHTPLFPSTEN 216 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEE-----CCHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhccccc-----cCHHHH----HhcCCEEEEcCCCCHHHHH
Confidence 45889999999999999999999999999998764 11222211 133322 35789999998864333
Q ss_pred HHHHHHHHHhCCCceEEEee
Q 000968 1088 YRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa 1107 (1207)
+.-...+..+-|+..+|=..
T Consensus 217 li~~~~l~~mk~gailIN~a 236 (343)
T 2yq5_A 217 MIGEKQLKEMKKSAYLINCA 236 (343)
T ss_dssp CBCHHHHHHSCTTCEEEECS
T ss_pred HhhHHHHhhCCCCcEEEECC
Confidence 22234455667775554443
No 343
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=80.72 E-value=1.6 Score=46.59 Aligned_cols=71 Identities=20% Similarity=0.133 Sum_probs=54.8
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC--CCCEEEecCCCHHHHHhcCc------cccCEEEEec
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVGA------ERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~--g~~vi~GDatd~evL~~AgI------~~A~~VViat 1081 (1207)
.++|.|. |-+|+.+++.|.+.|..|+++|++++..+..... +..++.+|.+|++.++++=- .+.|.+|-..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 83 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNA 83 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4667765 6799999999999999999999999887765433 45688999999987765421 2567777655
No 344
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.65 E-value=1.6 Score=47.25 Aligned_cols=73 Identities=11% Similarity=0.151 Sum_probs=54.0
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----h--CCCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A--LDLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~--~g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
..++|.| .|.+|+.+++.|.+.|..|++++++++..+... . ..+.++.+|.++++.++++= ..+.|.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 111 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 111 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 3466665 578999999999999999999999987765432 2 24677889999998775541 135688
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 112 li~~Ag 117 (272)
T 1yb1_A 112 LVNNAG 117 (272)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776653
No 345
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=80.63 E-value=1.4 Score=50.80 Aligned_cols=88 Identities=17% Similarity=0.137 Sum_probs=58.2
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|++|+.+++.|+..|.++++.|+++.. +.....|+. + .+.+.+ +.++|.|++.++....+..
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~--~---~~l~el----l~~aDvV~l~~Plt~~T~~ 246 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENGVE--P---ASLEDV----LTKSDFIFVVAAVTSENKR 246 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTTCE--E---CCHHHH----HHSCSEEEECSCSSCC---
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcCee--e---CCHHHH----HhcCCEEEEcCcCCHHHHh
Confidence 35889999999999999999999999999988533 334445543 1 233322 3578999998876544332
Q ss_pred H--HHHHHHhCCCceEEEee
Q 000968 1090 T--VWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~IIaRa 1107 (1207)
+ ...+..+-|+..+|=.+
T Consensus 247 li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 247 FLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp CCCHHHHHTSCTTCEEEECS
T ss_pred hcCHHHHhcCCCCcEEEECc
Confidence 2 34455566775554444
No 346
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=80.58 E-value=6.3 Score=37.81 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=57.9
Q ss_pred CCeEeecCChHHHHhh----hhC-CCCEEEecCCCHHHHHhcCc-cccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RAL-DLPVYFGDAGSREVLHKVGA-ERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~-g~~vi~GDatd~evL~~AgI-~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
..++++|.|+...+.+ ... |+..+.--.+-.+.+....- ...+.+++-..-+. .-...+..+|+.+|++++|+
T Consensus 4 ~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 83 (154)
T 2qsj_A 4 TVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVAL 83 (154)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEE
Confidence 3567777776654433 233 55333333334455555544 56788877665433 34677888899999999988
Q ss_pred eeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.+... +......++|++.++...+
T Consensus 84 ls~~~~~~~~~~~~~~g~~~~l~kp~ 109 (154)
T 2qsj_A 84 ISGETDHELIRAALEAGADGFIPKSA 109 (154)
T ss_dssp C-----CHHHHHHHHTTCCBBCCTTS
T ss_pred EeCCCCHHHHHHHHHccCCEEEeCCC
Confidence 77654 5667778899998875543
No 347
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.58 E-value=1.6 Score=47.66 Aligned_cols=75 Identities=11% Similarity=0.092 Sum_probs=56.1
Q ss_pred cccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC---CCCEEEecCCCHHHHHhcC--ccccCEEEE
Q 000968 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVG--AERACAAAI 1079 (1207)
Q Consensus 1007 ~lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~---g~~vi~GDatd~evL~~Ag--I~~A~~VVi 1079 (1207)
++++ .++|.|. |-+|+.+++.|.+.|..|++++++++..+..... .+.++.+|.+|++.++++- +.+.|.+|-
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3444 4566664 6799999999999999999999999887766432 4678899999998876542 235577765
Q ss_pred ec
Q 000968 1080 TL 1081 (1207)
Q Consensus 1080 at 1081 (1207)
..
T Consensus 93 nA 94 (291)
T 3rd5_A 93 NA 94 (291)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 348
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=80.53 E-value=9 Score=35.86 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=37.5
Q ss_pred cccCEEEEecCCcchhHHHHHHHHHhCC-CceEEEeeCCh--HHHHHHHhCCCCeeecCC
Q 000968 1072 ERACAAAITLDTPGANYRTVWALSKYFP-NVKTFVRAHDI--DHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1072 ~~A~~VViatddd~~Ni~i~l~aR~l~P-~i~IIaRa~d~--~~~~~L~~aGAd~VI~p~ 1128 (1207)
...+.++ .++ ..-+.++..+|+. | ++++|+.+... +......++|++.++...
T Consensus 61 ~~~dlvi--~~~-~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP 116 (137)
T 2pln_A 61 RNYDLVM--VSD-KNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKP 116 (137)
T ss_dssp SCCSEEE--ECS-TTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred CCCCEEE--EcC-ccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCC
Confidence 4567766 332 3446777788887 8 88988877654 677778899999888554
No 349
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=80.52 E-value=1.5 Score=50.00 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=69.8
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhc-CccccCEEEEecCCcchh
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV-GAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~A-gI~~A~~VViatddd~~N 1087 (1207)
..+++|+|.|..|+.+++.++..|+.++++|.+++... ...--.++..+..|.+.+.+. .-.+.|+|+...++...+
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~--~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~~~ 88 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPA--MHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATD 88 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGG--GGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCch--hhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCcCCHH
Confidence 45799999999999999999999999999999876421 111224567777777665543 234678877766554333
Q ss_pred HHHHHHHHHh----CCCceEEEeeCChHHHHHH--HhCCCC
Q 000968 1088 YRTVWALSKY----FPNVKTFVRAHDIDHGLNL--EKAGAT 1122 (1207)
Q Consensus 1088 i~i~l~aR~l----~P~i~IIaRa~d~~~~~~L--~~aGAd 1122 (1207)
.+..+.+. .|+...+....|......+ +++|+.
T Consensus 89 --~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip 127 (391)
T 1kjq_A 89 --MLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLP 127 (391)
T ss_dssp --HHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCC
T ss_pred --HHHHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCC
Confidence 22223222 2444444455565554444 367754
No 350
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=80.45 E-value=1.8 Score=46.51 Aligned_cols=72 Identities=14% Similarity=-0.002 Sum_probs=52.8
Q ss_pred ccccccCC---CchHHHHHHHHHhcCCCeEeecCCh---HHHHhhhh--CCCCEEEecCCCHHHHHhc------CccccC
Q 000968 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRS---DRVAIGRA--LDLPVYFGDAGSREVLHKV------GAERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~---GrvG~~Ia~~L~~~gi~vvVID~D~---e~ve~~r~--~g~~vi~GDatd~evL~~A------gI~~A~ 1075 (1207)
..++|.|. |-+|+.+++.|.+.|..|+++++++ +..+.+.. .+..++.+|.++++.++++ ...+.|
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 89 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD 89 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788887 5899999999999999999999987 44444432 2357889999999877543 112567
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 90 ~lv~~A 95 (265)
T 1qsg_A 90 GFVHSI 95 (265)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776654
No 351
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.39 E-value=1.4 Score=49.12 Aligned_cols=83 Identities=14% Similarity=0.100 Sum_probs=54.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.++++.|++++..+. . . ...+.+.+ +.++|.|+++++....+..
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~---~-~~~~l~el----l~~aDiV~l~~P~t~~t~~ 189 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----D---V-ISESPADL----FRQSDFVLIAIPLTDKTRG 189 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----S---E-ECSSHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----c---c-ccCChHHH----hhccCeEEEEeeccccchh
Confidence 35789999999999999999999999999998754321 1 1 12233322 3578999999986433322
Q ss_pred --HHHHHHHhCCCceEEE
Q 000968 1090 --TVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1090 --i~l~aR~l~P~i~IIa 1105 (1207)
-....+.+.|+..+|-
T Consensus 190 li~~~~l~~mk~gailIN 207 (290)
T 3gvx_A 190 MVNSRLLANARKNLTIVN 207 (290)
T ss_dssp CBSHHHHTTCCTTCEEEE
T ss_pred hhhHHHHhhhhcCceEEE
Confidence 2233455566654443
No 352
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=80.34 E-value=4.7 Score=47.29 Aligned_cols=136 Identities=16% Similarity=0.128 Sum_probs=85.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeE-eecC----------ChHHHHhhhhC-C-CCEEEecCCCHHHHHhcCccccCE
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFV-ALDV----------RSDRVAIGRAL-D-LPVYFGDAGSREVLHKVGAERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vv-VID~----------D~e~ve~~r~~-g-~~vi~GDatd~evL~~AgI~~A~~ 1076 (1207)
..++|.|+|.+|+..++.|.+.|..++ +.|. |.+.+...++. + +.-+ ..+..++|. -.+|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~--~~~~~e~~~----~~~DV 292 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL--DLAPEEVFG----LEAEV 292 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC--CBCTTTGGG----SSCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee--eccchhhhc----cCceE
Confidence 368899999999999999999999999 8888 77777655432 2 1100 112233443 37888
Q ss_pred EEEecCCcchhHHHHHHHHHhCCCceEEEeeCC----hHHHHHHHhCCCCeeecCCcHH-HHHHHHHHHH------HcCC
Q 000968 1077 AAITLDTPGANYRTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVPETLEP-SLQLAAAVLA------QAKL 1145 (1207)
Q Consensus 1077 VViatddd~~Ni~i~l~aR~l~P~i~IIaRa~d----~~~~~~L~~aGAd~VI~p~~ea-al~La~~iL~------~lg~ 1145 (1207)
++=+.-....|.. .++.+ .+++|+..-+ ++..+.|.+.|+-. .|.+.+ +-.++..-+. .+..
T Consensus 293 liP~A~~n~i~~~---~A~~l--~ak~V~EgAN~p~t~~A~~~L~~~Gi~~--~PD~~aNaGGV~~S~~E~~qn~~~~~w 365 (419)
T 3aoe_E 293 LVLAAREGALDGD---RARQV--QAQAVVEVANFGLNPEAEAYLLGKGALV--VPDLLSGGGGLLASYLEWVQDLNMFFW 365 (419)
T ss_dssp EEECSCTTCBCHH---HHTTC--CCSEEEECSTTCBCHHHHHHHHHHTCEE--ECHHHHTCHHHHHHHHHHHHHHHTCCC
T ss_pred EEecccccccccc---hHhhC--CceEEEECCCCcCCHHHHHHHHHCCCEE--ECHHHHhCCCchhhHHHHhhcccccCC
Confidence 7776655444443 34444 5789998754 68889999999643 343321 1122222222 3466
Q ss_pred CHHHHHHHHHHHH
Q 000968 1146 PASEIAATINEFR 1158 (1207)
Q Consensus 1146 ~~~ei~~~i~~~r 1158 (1207)
+.+++..-++..-
T Consensus 366 ~~eev~~~l~~im 378 (419)
T 3aoe_E 366 SPEEVRERFETRV 378 (419)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 7777776666653
No 353
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=80.28 E-value=0.89 Score=51.18 Aligned_cols=80 Identities=18% Similarity=0.047 Sum_probs=53.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.++++.|++++..+ .+..+.+-+ +.++|.|+++++....+..
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------~~~~~l~el----l~~aDvV~l~~p~~~~t~~ 209 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----------YPFLSLEEL----LKEADVVSLHTPLTPETHR 209 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------SCBCCHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----------cccCCHHHH----HhhCCEEEEeCCCChHHHh
Confidence 3588999999999999999999999999998875432 122333222 2468999999877643322
Q ss_pred HH--HHHHHhCCCceEE
Q 000968 1090 TV--WALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i~--l~aR~l~P~i~II 1104 (1207)
++ ..+..+.|+..+|
T Consensus 210 li~~~~l~~mk~ga~li 226 (311)
T 2cuk_A 210 LLNRERLFAMKRGAILL 226 (311)
T ss_dssp CBCHHHHTTSCTTCEEE
T ss_pred hcCHHHHhhCCCCcEEE
Confidence 11 2344555664444
No 354
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=80.21 E-value=3 Score=46.78 Aligned_cols=95 Identities=9% Similarity=0.001 Sum_probs=65.0
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-------CCCEEEecCCCHHHHHhcCccccCEEEEec
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-------g~~vi~GDatd~evL~~AgI~~A~~VViat 1081 (1207)
..+|+-+|+|..+......-+..+..|+.||.|++.++.+++. ++.++.||+.+.. -...|.|++..
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~------d~~FDvV~~~a 196 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID------GLEFDVLMVAA 196 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG------GCCCSEEEECT
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC------CCCcCEEEECC
Confidence 3578888988754332222223588999999999999877542 4688999998732 26789988765
Q ss_pred CCcchhHHHHHHHHHhCCCceEEEeeCC
Q 000968 1082 DTPGANYRTVWALSKYFPNVKTFVRAHD 1109 (1207)
Q Consensus 1082 ddd~~Ni~i~l~aR~l~P~i~IIaRa~d 1109 (1207)
.-+..........|.+.|.-+++++..+
T Consensus 197 ~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 197 LAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp TCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 4333333445566778899899988754
No 355
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=80.17 E-value=1.8 Score=46.58 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=52.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh--------hCCCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR--------ALDLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r--------~~g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+... ...+.++.+|.+|++.++++= ..+.|
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 94 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID 94 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 466665 567999999999999999999999987765432 224567789999998776541 12567
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 95 ~lv~nA 100 (267)
T 1iy8_A 95 GFFNNA 100 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 356
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=80.15 E-value=6.7 Score=44.22 Aligned_cols=122 Identities=14% Similarity=0.119 Sum_probs=74.8
Q ss_pred ccccccCCCchHHH-HHHHHHhc-CCCeE-eecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~-gi~vv-VID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
-++.|+|+|.+|+. .+..|... +..++ +.|.|+++.+. ...+.++ +. +.+-|.+. .+.|+|+++++++..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~-~~---~~~~ll~~--~~vD~V~i~tp~~~H 80 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPV-VS---DPQMLFND--PSIDLIVIPTPNDTH 80 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSCCE-ES---CHHHHHHC--SSCCEEEECSCTTTH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCCce-EC---CHHHHhcC--CCCCEEEEeCChHHH
Confidence 46899999999997 78888765 56655 77999988762 2223443 32 33333322 568999999987644
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeeecC--CcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI~p--~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+.. .+....+-++.++.
T Consensus 81 -~~~~~~al~aG--khV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (352)
T 3kux_A 81 -FPLAQSALAAG--KHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLA 141 (352)
T ss_dssp -HHHHHHHHHTT--CEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred -HHHHHHHHHCC--CcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHh
Confidence 34444444444 467764 4555555544 55677655532 34455555666554
No 357
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=80.14 E-value=4.9 Score=37.76 Aligned_cols=95 Identities=9% Similarity=0.021 Sum_probs=60.0
Q ss_pred CeEeecCChHHHHhh----hhCC-CCEEEecCCCHHHHHhcCccccCEEEEecCCcch-hHHHHHHHHHhCCCceEEEee
Q 000968 1034 PFVALDVRSDRVAIG----RALD-LPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g-~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
.++++|.|+...+.+ +..| +.+..- .+-.+.++...-...+.+++-..-+.. -+..+..+|+.+|++++|+-+
T Consensus 16 ~ilivdd~~~~~~~l~~~L~~~g~~~v~~~-~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 94 (135)
T 3snk_A 16 QVALFSSDPNFKRDVATRLDALAIYDVRVS-ETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVS 94 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSSEEEEEE-CGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhhcCCeEEEEe-ccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEe
Confidence 456666665544322 3345 444422 223345555555678888886654433 356777889999999988877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......++|++.++...+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~l~KP~ 118 (135)
T 3snk_A 95 DELTSEQTRVLVRMNASDWLHKPL 118 (135)
T ss_dssp SCCCHHHHHHHHHTTCSEEEESSC
T ss_pred CCCCHHHHHHHHHcCcHhhccCCC
Confidence 64 45677778999998885544
No 358
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=80.12 E-value=2.3 Score=45.92 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=53.4
Q ss_pred ccccccC---CCchHHHHHHHHHhcCCCeEeecCChHH-HHhhhh---CCCCEEEecCCCHHHHHhcCc---------cc
Q 000968 1010 DHIILCG---FGRVGQIIAQLLSERLIPFVALDVRSDR-VAIGRA---LDLPVYFGDAGSREVLHKVGA---------ER 1073 (1207)
Q Consensus 1010 ~hVIIiG---~GrvG~~Ia~~L~~~gi~vvVID~D~e~-ve~~r~---~g~~vi~GDatd~evL~~AgI---------~~ 1073 (1207)
..++|.| .+.+|+.+++.|.+.|..|++++++++. .+...+ ....++.+|.++++.++++=- .+
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~ 87 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNK 87 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCC
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence 3578888 4899999999999999999999998765 343332 246789999999987654311 15
Q ss_pred cCEEEEec
Q 000968 1074 ACAAAITL 1081 (1207)
Q Consensus 1074 A~~VViat 1081 (1207)
.|.+|-..
T Consensus 88 iD~lv~nA 95 (269)
T 2h7i_A 88 LDGVVHSI 95 (269)
T ss_dssp EEEEEECC
T ss_pred ceEEEECC
Confidence 67776543
No 359
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=80.11 E-value=5.2 Score=37.87 Aligned_cols=96 Identities=7% Similarity=-0.010 Sum_probs=61.8
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecCCc--chhHHHHHHHHHhCCCceEE
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGA-ERACAAAITLDTP--GANYRTVWALSKYFPNVKTF 1104 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatddd--~~Ni~i~l~aR~l~P~i~II 1104 (1207)
+..+.++|.|+...+.+ ...|+.+.. -.+..+.++...- ...+.+++-..-+ ..-..++..+|+. |++++|
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii 82 (140)
T 3h5i_A 5 DKKILIVEDSKFQAKTIANILNKYGYTVEI-ALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI-SELPVV 82 (140)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEE
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCEEEE-ecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEE
Confidence 45677788777655433 345666553 2333455555433 5678888877653 4556777788876 888888
Q ss_pred EeeCChH--HHHHHHhCCCCeeecCCc
Q 000968 1105 VRAHDID--HGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1105 aRa~d~~--~~~~L~~aGAd~VI~p~~ 1129 (1207)
+-+...+ ......++|++.++...+
T Consensus 83 ~ls~~~~~~~~~~~~~~g~~~~l~KP~ 109 (140)
T 3h5i_A 83 FLTAHTEPAVVEKIRSVTAYGYVMKSA 109 (140)
T ss_dssp EEESSSSCCCCGGGGGSCEEEEEETTC
T ss_pred EEECCCCHHHHHHHHhCCCcEEEeCCC
Confidence 8776543 556777899998885543
No 360
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=81.21 E-value=0.35 Score=50.91 Aligned_cols=64 Identities=14% Similarity=0.089 Sum_probs=47.0
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
++.|+|+|.+|..+++.|.+.|.+++++|++++ .+.+...|..+. +..+ -+..+|.|+++++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~----~~~~-----~~~~aDvVilav~~~ 84 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL----CYSE-----AASRSDVIVLAVHRE 84 (201)
Confidence 588999999999999999999999999999877 444433343211 1111 235789999998875
No 361
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=80.03 E-value=1.8 Score=46.04 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=53.0
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh--CCCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA--LDLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~--~g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +. ..+.++.+|.+|++.++++= ..+.|.+
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 94 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDIL 94 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 466665 57899999999999999999999998765432 22 24678899999998876542 1256787
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 95 i~~A 98 (260)
T 3awd_A 95 VACA 98 (260)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 362
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=80.02 E-value=4.4 Score=45.48 Aligned_cols=123 Identities=17% Similarity=0.158 Sum_probs=78.4
Q ss_pred cccccCCCchHHHHHHHHH-h-cCCCeE-eecCChHHHHhhh-hCCC-CEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1011 HIILCGFGRVGQIIAQLLS-E-RLIPFV-ALDVRSDRVAIGR-ALDL-PVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~-~-~gi~vv-VID~D~e~ve~~r-~~g~-~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
++.|+|+|.+|+..++.|. . .+..++ +.|.|+++.+... ..|+ ..++.| -.+.|.. .+.|+|+++++++.
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~--~~~ll~~---~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPN--DDSLLAD---ENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESS--HHHHHHC---TTCCEEEECSCGGG
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCEEEECCCchh
Confidence 5889999999999999998 4 356655 7799999887664 4463 234432 2334442 46899999997764
Q ss_pred hhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCe-ee--cCCcHHHHHHHHHHHH
Q 000968 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATA-VV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~-VI--~p~~eaal~La~~iL~ 1141 (1207)
. ...+..+-+.+ .++++. +.+.++.+.+ ++.|... .+ ...+..+.+-++.++.
T Consensus 79 h-~~~~~~al~~G--k~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~ 141 (344)
T 3mz0_A 79 H-ESSVLKAIKAQ--KYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALD 141 (344)
T ss_dssp H-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHH
T ss_pred H-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHH
Confidence 3 34444444444 467764 4466665555 4457654 22 4455666666666665
No 363
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=79.99 E-value=4.1 Score=45.72 Aligned_cols=123 Identities=12% Similarity=0.068 Sum_probs=79.0
Q ss_pred cccccCCCchHHH-HHHHHHhc-CCCeE-eecCChHHHHhh-hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQI-IAQLLSER-LIPFV-ALDVRSDRVAIG-RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~-Ia~~L~~~-gi~vv-VID~D~e~ve~~-r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++-|||+|.+|+. .+..+... +..++ |.|.|+++.+.. ++.|++-+|.|. .+.|.. ++.|+|+++++++..
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~--~ell~~---~~iDaV~I~tP~~~H 99 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSY--EEMLAS---DVIDAVYIPLPTSQH 99 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSH--HHHHHC---SSCSEEEECSCGGGH
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCH--HHHhcC---CCCCEEEEeCCCchh
Confidence 5889999999985 57777764 55665 679999988766 455877667543 334443 567999999988643
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
...+..+-+.+ .+|++. +.+.++.+.+ ++.|.-..+ ...+..+.+-++.++.
T Consensus 100 -~~~~~~al~aG--khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~ 160 (350)
T 4had_A 100 -IEWSIKAADAG--KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLID 160 (350)
T ss_dssp -HHHHHHHHHTT--CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred -HHHHHHHHhcC--CEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhh
Confidence 34444444444 356665 4455544444 455766555 3345566666666665
No 364
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=79.98 E-value=4.1 Score=46.27 Aligned_cols=122 Identities=15% Similarity=0.075 Sum_probs=73.2
Q ss_pred cccccCCCchHHH-HHHHHHhc-CCCeE-eecCChHHHHhhhhC-CCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1011 HIILCGFGRVGQI-IAQLLSER-LIPFV-ALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1011 hVIIiG~GrvG~~-Ia~~L~~~-gi~vv-VID~D~e~ve~~r~~-g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
++-|+|+|.+|+. .++.|.+. +..++ +.|.|+++.+...+. +..-++.| -.++|... +.|+|+++++++..
T Consensus 7 rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~--~~~ll~~~---~vD~V~i~tp~~~H 81 (359)
T 3m2t_A 7 KVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDN--VPAMLNQV---PLDAVVMAGPPQLH 81 (359)
T ss_dssp EEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESS--HHHHHHHS---CCSEEEECSCHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCC--HHHHhcCC---CCCEEEEcCCcHHH
Confidence 6889999999985 88888775 56666 779999998877654 33333432 24445543 45899999987633
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeeec--CCcHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVP--ETLEPSLQLAAAVL 1140 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI~--p~~eaal~La~~iL 1140 (1207)
...+..+-+.+ .++++. +.+.++...+ ++.|.-..+. ..+..+.+-++.++
T Consensus 82 -~~~~~~al~aG--khVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 141 (359)
T 3m2t_A 82 -FEMGLLAMSKG--VNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMT 141 (359)
T ss_dssp -HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHH
T ss_pred -HHHHHHHHHCC--CeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHH
Confidence 34444443443 456664 4455555444 4446655442 22334444444444
No 365
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=79.98 E-value=1.9 Score=46.29 Aligned_cols=72 Identities=14% Similarity=0.010 Sum_probs=53.1
Q ss_pred ccccccCC---CchHHHHHHHHHhcCCCeEeecCChH---HHHhhhh--CCCCEEEecCCCHHHHHhcCc------cccC
Q 000968 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVGA------ERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~---GrvG~~Ia~~L~~~gi~vvVID~D~e---~ve~~r~--~g~~vi~GDatd~evL~~AgI------~~A~ 1075 (1207)
..++|.|. |.+|+.+++.|.+.|..|++++++++ ..+.+.. .+..++.+|.++++.++++-- .+.|
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788887 58999999999999999999999875 3343332 236788999999987765411 2456
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 89 ~lv~~A 94 (261)
T 2wyu_A 89 YLVHAI 94 (261)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766654
No 366
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=79.92 E-value=0.55 Score=50.72 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=54.7
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEec
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViat 1081 (1207)
+++|.| .|.+|+.+++.|.+.|..|+++++++...+ ..+..++.+|.+|++.++++ +++.|.||-..
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~A 72 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAM-VAGCDGIVHLG 72 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHH-HTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHH-HcCCCEEEECC
Confidence 577777 688999999999999999999999875432 44678899999999988765 34788888664
No 367
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.90 E-value=2.1 Score=47.38 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=52.4
Q ss_pred ccccccCC-CchHHHHHHHHHhcC--CCeEeecCChH--HHHhhh----hCCCCEEEecCCCHHHHHhcCcc-ccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERL--IPFVALDVRSD--RVAIGR----ALDLPVYFGDAGSREVLHKVGAE-RACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~g--i~vvVID~D~e--~ve~~r----~~g~~vi~GDatd~evL~~AgI~-~A~~VVi 1079 (1207)
.+|+|.|. |-+|+.+++.|.+.| +.+++++..+. ..+.+. ..++.++.||.+|++.+.++=-. ++|.||-
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 104 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVN 104 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEE
Confidence 35888887 999999999999999 66777765531 112221 24788999999999988776321 4788886
Q ss_pred ecC
Q 000968 1080 TLD 1082 (1207)
Q Consensus 1080 atd 1082 (1207)
+..
T Consensus 105 ~A~ 107 (346)
T 4egb_A 105 FAA 107 (346)
T ss_dssp CCC
T ss_pred CCc
Confidence 653
No 368
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=79.85 E-value=15 Score=35.03 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=59.8
Q ss_pred CCCeEeecCChHHHHhh----hhCCC--CEEEecCCCHHHHHhc---------CccccCEEEEecCCcc-hhHHHHHHHH
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDL--PVYFGDAGSREVLHKV---------GAERACAAAITLDTPG-ANYRTVWALS 1095 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~--~vi~GDatd~evL~~A---------gI~~A~~VViatddd~-~Ni~i~l~aR 1095 (1207)
...++++|.|+...+.+ +..|+ .+.. -.+-.+.++.. .-...+.|++-..-+. .-+.++..+|
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~-~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr 82 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIA-FTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVK 82 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEE-ESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEE-eCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 35677777777655433 34455 3332 22233444443 2356777777655443 3467788888
Q ss_pred H--hCCCceEEEeeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1096 K--YFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1096 ~--l~P~i~IIaRa~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+ .+|++++|+.+... +......++|++.++...+
T Consensus 83 ~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~ 120 (152)
T 3heb_A 83 ENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPV 120 (152)
T ss_dssp HSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCS
T ss_pred hcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCC
Confidence 8 67888888777654 4667788999999885543
No 369
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.83 E-value=1.6 Score=46.84 Aligned_cols=71 Identities=15% Similarity=-0.014 Sum_probs=53.7
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC---CCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~---g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+...+. ...++.+|.++++.++++= ..+.|.+|-.
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~n 86 (254)
T 1hdc_A 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNN 86 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4677765 7899999999999999999999998877654322 3567889999998776541 1256777765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 87 A 87 (254)
T 1hdc_A 87 A 87 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 370
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=79.78 E-value=2 Score=48.04 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=52.4
Q ss_pred ccccccCC-CchHHHHHHHHHhcC-CCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCcc----ccCEEEEecC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE----RACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~g-i~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~----~A~~VViatd 1082 (1207)
.+++|.|. |.+|+.+++.|.+.| ..|+++++++.........+.. +.||.++++.++++--. ++|+||-+..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 35888887 999999999999999 9999999876542111112334 77999999888765322 6888887654
No 371
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=79.76 E-value=8.3 Score=39.81 Aligned_cols=93 Identities=9% Similarity=0.038 Sum_probs=61.1
Q ss_pred cCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-------CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-
Q 000968 1015 CGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1207)
Q Consensus 1015 iG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-------~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~- 1086 (1207)
||.|.++..+++.. .+..++.+|.+++.++.++. .++.++.||+.+.. ....-...|.|++..+++..
T Consensus 50 cG~G~~~~~la~~~--p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~D~i~~~~~~~~~~ 125 (214)
T 1yzh_A 50 SGKGAFVSGMAKQN--PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT--DYFEDGEIDRLYLNFSDPWPK 125 (214)
T ss_dssp CTTSHHHHHHHHHC--TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--GTSCTTCCSEEEEESCCCCCS
T ss_pred cCcCHHHHHHHHHC--CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--hhcCCCCCCEEEEECCCCccc
Confidence 66777777766653 25689999999998876643 35778999998722 11233468898888766421
Q ss_pred ----------hHHHHHHHHHhCCCceEEEeeCChH
Q 000968 1087 ----------NYRTVWALSKYFPNVKTFVRAHDID 1111 (1207)
Q Consensus 1087 ----------Ni~i~l~aR~l~P~i~IIaRa~d~~ 1111 (1207)
...+....+-+.|+-.++..+....
T Consensus 126 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (214)
T 1yzh_A 126 KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG 160 (214)
T ss_dssp GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH
T ss_pred cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 1233344556778877777775544
No 372
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=79.72 E-value=0.45 Score=51.12 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=54.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.++|.|. |.+|+.+++.|.+.|.+|++++++++.. ...+..++.+|.++++.+.++ +++.|.||-+..
T Consensus 4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~ 72 (267)
T 3ay3_A 4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---AEAHEEIVACDLADAQAVHDL-VKDCDGIIHLGG 72 (267)
T ss_dssp EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---CCTTEEECCCCTTCHHHHHHH-HTTCSEEEECCS
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---cCCCccEEEccCCCHHHHHHH-HcCCCEEEECCc
Confidence 5788886 9999999999999999999999987531 123567888999999988765 457899887653
No 373
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=79.65 E-value=1.4 Score=46.89 Aligned_cols=72 Identities=18% Similarity=0.090 Sum_probs=53.9
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+.... .+..++.+|.++++-++++-- .+.|.+|-.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn 84 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHC 84 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 4677775 679999999999999999999999887765532 257788999999887654311 245777765
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 85 Ag 86 (235)
T 3l6e_A 85 AG 86 (235)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 374
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=79.64 E-value=2.3 Score=45.48 Aligned_cols=74 Identities=14% Similarity=-0.004 Sum_probs=53.2
Q ss_pred ccccccccCC---CchHHHHHHHHHhcCCCeEeecCChHHH---Hhhhh--CCCCEEEecCCCHHHHHhcCc------cc
Q 000968 1008 LQDHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSDRV---AIGRA--LDLPVYFGDAGSREVLHKVGA------ER 1073 (1207)
Q Consensus 1008 lk~hVIIiG~---GrvG~~Ia~~L~~~gi~vvVID~D~e~v---e~~r~--~g~~vi~GDatd~evL~~AgI------~~ 1073 (1207)
...+++|.|. +.+|+.+++.|.+.|..+++++++.... +.... ....++.+|.++++.++++-- .+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3456888886 4899999999999999999998875433 33221 247899999999987765421 24
Q ss_pred cCEEEEec
Q 000968 1074 ACAAAITL 1081 (1207)
Q Consensus 1074 A~~VViat 1081 (1207)
.|.+|-..
T Consensus 93 id~lv~nA 100 (271)
T 3ek2_A 93 LDGLVHSI 100 (271)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 57776544
No 375
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=79.60 E-value=1.6 Score=46.79 Aligned_cols=71 Identities=13% Similarity=0.079 Sum_probs=54.0
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+...+ ..+.++.+|.+|++.++++- ..+.|.+|-.
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn 81 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN 81 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 356666 4679999999999999999999999887765532 24677889999998876541 2356777764
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 82 A 82 (248)
T 3asu_A 82 A 82 (248)
T ss_dssp C
T ss_pred C
Confidence 4
No 376
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=79.54 E-value=1.7 Score=46.66 Aligned_cols=71 Identities=8% Similarity=0.055 Sum_probs=52.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-------C-CCCEEEecCCCHHHHHhcCc------cccC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------L-DLPVYFGDAGSREVLHKVGA------ERAC 1075 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-------~-g~~vi~GDatd~evL~~AgI------~~A~ 1075 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+...+ . ++.++.+|.+|++.++++=- . .|
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id 87 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-AD 87 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CC
Confidence 466666 5679999999999999999999999876654321 1 56778899999987765411 2 67
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.+|-...
T Consensus 88 ~lv~~Ag 94 (260)
T 2z1n_A 88 ILVYSTG 94 (260)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776553
No 377
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=79.52 E-value=2.4 Score=46.20 Aligned_cols=72 Identities=11% Similarity=-0.026 Sum_probs=53.5
Q ss_pred ccccccCC---CchHHHHHHHHHhcCCCeEeecCChH---HHHhhhh--CCCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~---GrvG~~Ia~~L~~~gi~vvVID~D~e---~ve~~r~--~g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
..++|.|. |.+|+.+++.|.+.|..|++++++++ ..+.+.. .+..++.+|.++++.++++= ..+.|
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLD 101 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788887 58999999999999999999999875 3343332 24678999999998776541 12567
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 102 ~lv~~A 107 (285)
T 2p91_A 102 IIVHSI 107 (285)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 378
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=79.49 E-value=2.7 Score=44.77 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=63.6
Q ss_pred cccccCCCchHHHHHHHHHhcCCCe-EeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPF-VALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~v-vVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
++-|+|+|.+|+.+++.|...|.++ .+.|.++ +.+ . .+ .+.+-+.+ .++|.|+++++++ ....
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~---~-----~~---~~~~~l~~---~~~DvVv~~~~~~-~~~~ 65 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHE---K-----MV---RGIDEFLQ---REMDVAVEAASQQ-AVKD 65 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCT---T-----EE---SSHHHHTT---SCCSEEEECSCHH-HHHH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chh---h-----hc---CCHHHHhc---CCCCEEEECCCHH-HHHH
Confidence 3678999999999999999888887 5888874 211 1 22 34443332 6789999999876 3334
Q ss_pred HHHHHHHhCCCceEEEeeCC----h----HHHHHHHhCCCCeeecCCcHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAHD----I----DHGLNLEKAGATAVVPETLEPS 1132 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~d----~----~~~~~L~~aGAd~VI~p~~eaa 1132 (1207)
.+..+.+. ..++++...- . +-.+..++.|....+.+....+
T Consensus 66 ~~~~~l~~--G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~ 114 (236)
T 2dc1_A 66 YAEKILKA--GIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGG 114 (236)
T ss_dssp HHHHHHHT--TCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSC
T ss_pred HHHHHHHC--CCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccC
Confidence 44433333 4456665321 1 2222334567776666655444
No 379
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=79.47 E-value=1.4 Score=51.22 Aligned_cols=110 Identities=20% Similarity=0.237 Sum_probs=72.1
Q ss_pred cccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcC-ccccCEEEEecCCcchh
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVG-AERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~Ag-I~~A~~VViatddd~~N 1087 (1207)
..+++|+|.|..|+.+++.+++.|+.++++|.+++..... .-..++..|..|.+.+.+.- -.+.|+|+...++...
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~--~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e~~~~- 95 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQ--VAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINL- 95 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTCHHHH--HSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCSCH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhh--hcceEEECCCCCHHHHHHHHHHcCCCEEEECcccCCH-
Confidence 3579999999999999999999999999999987653221 11245677888877665432 2477888777665432
Q ss_pred HHHHHHHHHh----CCCceEEEeeCChHHHHHH--HhCCCC
Q 000968 1088 YRTVWALSKY----FPNVKTFVRAHDIDHGLNL--EKAGAT 1122 (1207)
Q Consensus 1088 i~i~l~aR~l----~P~i~IIaRa~d~~~~~~L--~~aGAd 1122 (1207)
..+..+.+. .|+...+....|......+ +++|+.
T Consensus 96 -~~~~~l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip 135 (433)
T 2dwc_A 96 -DALFEFEKDGYFVVPNARATWIAMHRERLRETLVKEAKVP 135 (433)
T ss_dssp -HHHHHHHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCC
T ss_pred -HHHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCC
Confidence 223223322 3444555566676655444 567864
No 380
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=79.42 E-value=11 Score=35.90 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=62.4
Q ss_pred CCeEeecCChHHHHhhh------hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIGR------ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~r------~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
..+.++|.|+...+.++ ..|+.++..-.+-.+.+....-...+.+++-..-+. .-+..+..+|+.+|++++|+
T Consensus 3 ~~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ 82 (141)
T 3cu5_A 3 LRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIF 82 (141)
T ss_dssp CEEEEECSCHHHHHHHHHHCCGGGSCCSEEEEESSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHccCCcEEeeecccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEE
Confidence 35788998887655432 246666644444466677666667888888765543 44677888888999999988
Q ss_pred eeCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1106 RAHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
-+... +......+.|++..+...+
T Consensus 83 ls~~~~~~~~~~~~~~ga~~~l~KP~ 108 (141)
T 3cu5_A 83 MSGYSDKEYLKAAIKFRAIRYVEKPI 108 (141)
T ss_dssp ECCSTTTCCC------CCCEEECSSC
T ss_pred EeCCCcHHHHHHHHhCCccEEEeCCC
Confidence 77644 4566777899998885544
No 381
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=79.40 E-value=1.7 Score=47.21 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=54.2
Q ss_pred ccccc-ccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC-----ccccCE
Q 000968 1007 DLQDH-IILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG-----AERACA 1076 (1207)
Q Consensus 1007 ~lk~h-VIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag-----I~~A~~ 1076 (1207)
+++++ ++|.|. +-+|+.+++.|.+.|..|++++++++..+...+ ..+.++.+|.++++.++++- ....|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 44444 556665 678999999999999999999999988765542 25678899999998776532 124566
Q ss_pred EEEe
Q 000968 1077 AAIT 1080 (1207)
Q Consensus 1077 VVia 1080 (1207)
+|..
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6544
No 382
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=79.40 E-value=1.2 Score=47.17 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=53.4
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCC-hHHHHhh----hh--CCCCEEEecCCCHHHHHhcCc------cccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVR-SDRVAIG----RA--LDLPVYFGDAGSREVLHKVGA------ERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D-~e~ve~~----r~--~g~~vi~GDatd~evL~~AgI------~~A~~ 1076 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++ ++..+.. +. ..+.++.+|.++++.++++=- .+.|.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 88 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDV 88 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 466766 4789999999999999999999998 6655433 22 246788899999988765421 26788
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 89 vi~~Ag 94 (258)
T 3afn_B 89 LINNAG 94 (258)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 876554
No 383
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=79.38 E-value=1.7 Score=45.79 Aligned_cols=71 Identities=17% Similarity=0.036 Sum_probs=53.4
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-------hCCCCEEEecCCCHHHHHhcCc------cccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVGA------ERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-------~~g~~vi~GDatd~evL~~AgI------~~A~~ 1076 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+... ...+.++.+|.+|++.++++-- .+.|.
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV 83 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 466766 578999999999999999999999987765432 1236778899999988765521 25677
Q ss_pred EEEec
Q 000968 1077 AAITL 1081 (1207)
Q Consensus 1077 VViat 1081 (1207)
+|-..
T Consensus 84 li~~A 88 (250)
T 2cfc_A 84 LVNNA 88 (250)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 384
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=79.37 E-value=5 Score=46.92 Aligned_cols=127 Identities=13% Similarity=0.022 Sum_probs=78.4
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCe-EeecCChHHHHhhhh----CCC---CEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPF-VALDVRSDRVAIGRA----LDL---PVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~v-vVID~D~e~ve~~r~----~g~---~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
-++.|||+|.+|+..++.|... +.++ .+.|.|+++.+...+ .|+ +++.++..+.+-|.+ -.+.|+|+++
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~--~~~vD~V~i~ 98 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLK--DKNIDAVFVS 98 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTT--CTTCCEEEEC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhc--CCCCCEEEEc
Confidence 3688999999999999998864 4554 477999998876532 353 344333334444432 2468999999
Q ss_pred cCCcchhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeeecC--CcHHHHHHHHHHHH
Q 000968 1081 LDTPGANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1081 tddd~~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI~p--~~eaal~La~~iL~ 1141 (1207)
++++.. ...+..+-+.+ .++++. +.+.++...+ ++.|....+.. .+..+..-+..++.
T Consensus 99 tp~~~h-~~~~~~al~aG--khV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 165 (444)
T 2ixa_A 99 SPWEWH-HEHGVAAMKAG--KIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVR 165 (444)
T ss_dssp CCGGGH-HHHHHHHHHTT--CEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCcHHH-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHH
Confidence 987643 44444444444 467774 4565555554 45687766532 33344455555554
No 385
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.37 E-value=2.1 Score=46.41 Aligned_cols=72 Identities=14% Similarity=-0.010 Sum_probs=53.4
Q ss_pred ccccccCC---CchHHHHHHHHHhcCCCeEeecCChH---HHHhhhh--CCCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~---GrvG~~Ia~~L~~~gi~vvVID~D~e---~ve~~r~--~g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
..++|.|. |.+|+.+++.|.+.|..|++++++++ ..+.+.. .+..++.+|.++++.++++- ..+.|
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 86 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD 86 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788887 58999999999999999999999875 4444432 23788999999998776541 12456
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 87 ~lv~nA 92 (275)
T 2pd4_A 87 FIVHSV 92 (275)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766654
No 386
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.30 E-value=1.7 Score=47.51 Aligned_cols=75 Identities=13% Similarity=0.058 Sum_probs=54.7
Q ss_pred cccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----h--CCCCEEEecCCCHHHHHhcCc------c
Q 000968 1007 DLQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A--LDLPVYFGDAGSREVLHKVGA------E 1072 (1207)
Q Consensus 1007 ~lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~--~g~~vi~GDatd~evL~~AgI------~ 1072 (1207)
++++ .++|.| .+-+|+.+++.|.+.|..|++++++++..+... . ....++.+|.+|++.++++=- .
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3443 466666 467999999999999999999999987655432 2 256788999999987765421 2
Q ss_pred ccCEEEEec
Q 000968 1073 RACAAAITL 1081 (1207)
Q Consensus 1073 ~A~~VViat 1081 (1207)
+.|.+|-..
T Consensus 109 ~iD~lvnnA 117 (276)
T 3r1i_A 109 GIDIAVCNA 117 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 567777654
No 387
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.27 E-value=3.2 Score=43.81 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=53.9
Q ss_pred cccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----h---CCCCEEEecC--CCHHHHHhcC-----
Q 000968 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A---LDLPVYFGDA--GSREVLHKVG----- 1070 (1207)
Q Consensus 1007 ~lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~---~g~~vi~GDa--td~evL~~Ag----- 1070 (1207)
.+++ .++|.|. |.+|+.+++.|.+.|..|++++++++..+... . ....++..|. ++++.++++-
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 3443 4666765 67999999999999999999999988765442 2 3456778888 8877665431
Q ss_pred -ccccCEEEEecC
Q 000968 1071 -AERACAAAITLD 1082 (1207)
Q Consensus 1071 -I~~A~~VViatd 1082 (1207)
..+.|.+|-...
T Consensus 91 ~~g~id~lv~nAg 103 (247)
T 3i1j_A 91 EFGRLDGLLHNAS 103 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 125677776543
No 388
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=79.26 E-value=2.8 Score=46.69 Aligned_cols=112 Identities=13% Similarity=-0.085 Sum_probs=68.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.+++|+|.|.+|+.++..|.+.|. +++++++++++.+.+.+ .+... ++..+.+.+.+ .+.++|.||.+++.....
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~-~~~~aDivIn~t~~~~~~ 218 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAET-RLAEYDIIINTTSVGMHP 218 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHH-TGGGCSEEEECSCTTCSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHh-hhccCCEEEECCCCCCCC
Confidence 469999999999999999999998 89999999988876643 22210 01122233433 457899999999875421
Q ss_pred -HH-HHHHHHHhCCCceEEEeeCCh---HHHHHHHhCCCCeee
Q 000968 1088 -YR-TVWALSKYFPNVKTFVRAHDI---DHGLNLEKAGATAVV 1125 (1207)
Q Consensus 1088 -i~-i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~aGAd~VI 1125 (1207)
.. .......+.|...++=-++++ ......++.|+. ++
T Consensus 219 ~~~~~~i~~~~l~~~~~v~D~~y~P~~T~ll~~A~~~G~~-~v 260 (297)
T 2egg_A 219 RVEVQPLSLERLRPGVIVSDIIYNPLETKWLKEAKARGAR-VQ 260 (297)
T ss_dssp CCSCCSSCCTTCCTTCEEEECCCSSSSCHHHHHHHHTTCE-EE
T ss_pred CCCCCCCCHHHcCCCCEEEEcCCCCCCCHHHHHHHHCcCE-EE
Confidence 00 000011123444344444433 245666888985 44
No 389
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=79.19 E-value=1.8 Score=46.49 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=54.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.| .|-+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++.++++= ..+.|.+|-.
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~ 89 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNN 89 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 466666 4679999999999999999999999887765532 24677889999998766541 1256777765
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 90 Ag 91 (259)
T 4e6p_A 90 AA 91 (259)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 390
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=79.19 E-value=1.6 Score=47.57 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=54.7
Q ss_pred ccccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-----CCCCEEEecCCCHHHHHhcC--c----cccC
Q 000968 1008 LQDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVG--A----ERAC 1075 (1207)
Q Consensus 1008 lk~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-----~g~~vi~GDatd~evL~~Ag--I----~~A~ 1075 (1207)
++..++|.|. |.+|+.+++.|.+.|..|++++++++..+.... ..+.++.+|.+|++.++++= + .+.|
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3456777764 679999999999999999999999887655432 25678889999998776541 1 2457
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 100 ~lvnnA 105 (272)
T 2nwq_A 100 GLINNA 105 (272)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 391
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=79.16 E-value=1.9 Score=47.06 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=54.9
Q ss_pred cccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1007 DLQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1007 ~lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
++++ .++|.| .+.+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++.++++- ..+.|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3444 466666 4679999999999999999999999887765532 35788899999998765531 12567
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 106 ~lvnnA 111 (277)
T 3gvc_A 106 KLVANA 111 (277)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776554
No 392
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=79.12 E-value=1 Score=50.28 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=55.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-----hCCCCEEEecCCCHHHHHhcCcc-ccCEEEEecC
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-----ALDLPVYFGDAGSREVLHKVGAE-RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-----~~g~~vi~GDatd~evL~~AgI~-~A~~VViatd 1082 (1207)
+++|.| .|.+|+.+++.|.+.|++|++++++++..+... ..++.++.||.++++.+.++=-. +.|.||-+..
T Consensus 11 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 89 (357)
T 1rkx_A 11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA 89 (357)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECCC
Confidence 578887 599999999999999999999998865432221 24678999999999888765211 4788887765
No 393
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=79.09 E-value=1 Score=50.94 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=54.3
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHH-----HHhhhh------C-CCCEEEecCCCHHHHHhcCcc-ccC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDR-----VAIGRA------L-DLPVYFGDAGSREVLHKVGAE-RAC 1075 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~-----ve~~r~------~-g~~vi~GDatd~evL~~AgI~-~A~ 1075 (1207)
..++|.|. |.+|+.+++.|.+.|++|++++++++. .+.... . ++.++.||.++++.+.++=-. +.|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 46888886 999999999999999999999987654 222211 1 677899999999887765211 468
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.||-+..
T Consensus 109 ~Vih~A~ 115 (381)
T 1n7h_A 109 EVYNLAA 115 (381)
T ss_dssp EEEECCS
T ss_pred EEEECCc
Confidence 8887654
No 394
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.08 E-value=15 Score=34.54 Aligned_cols=95 Identities=8% Similarity=0.153 Sum_probs=61.2
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeC
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
.++++|.|+...+.+ ...|+.+.. -.+-.+.++...-...+.+++-..-+. .-+..+..+|+.+|++++|+.+.
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~ 84 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDEPYDIFH-VETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATA 84 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTSSSEEEE-ESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEES
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCceEEE-eCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEe
Confidence 467777776654433 334665442 223345555555556788877665443 34677888888889888887765
Q ss_pred C--hHHHHHHHhCCCCeeecCCc
Q 000968 1109 D--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1109 d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
. .+......++|++..+...+
T Consensus 85 ~~~~~~~~~~~~~ga~~~l~KP~ 107 (137)
T 3cfy_A 85 HGSVDLAVNLIQKGAEDFLEKPI 107 (137)
T ss_dssp SCCHHHHHHHHHTTCSEEEESSC
T ss_pred cCcHHHHHHHHHCCccEEEeCCC
Confidence 4 45677788899998775433
No 395
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=79.07 E-value=2.6 Score=45.04 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=53.6
Q ss_pred ccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-------CCCCEEEecC--CCHHHHHhcC------
Q 000968 1008 LQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVYFGDA--GSREVLHKVG------ 1070 (1207)
Q Consensus 1008 lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-------~g~~vi~GDa--td~evL~~Ag------ 1070 (1207)
+++ .++|.|. +-+|+.+++.|.+.|..|++++++++..+.... ....++..|. ++++.++++-
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 444 4666665 669999999999999999999999887654421 1567888999 8887654431
Q ss_pred ccccCEEEEecC
Q 000968 1071 AERACAAAITLD 1082 (1207)
Q Consensus 1071 I~~A~~VViatd 1082 (1207)
..+.|.+|-...
T Consensus 90 ~g~id~lv~nAg 101 (252)
T 3f1l_A 90 YPRLDGVLHNAG 101 (252)
T ss_dssp CSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 125677776543
No 396
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=79.06 E-value=2.9 Score=45.53 Aligned_cols=112 Identities=17% Similarity=0.186 Sum_probs=67.2
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEe-ecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVA-LDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvV-ID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
++.|+|+|++|+.+++.+.+.+..++. +|.+++. ..|++++ .|.. ++ . ++|.+|-.+. ++....
T Consensus 5 kI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~-~dl~------~l-~-~~DVvIDft~-p~a~~~ 69 (243)
T 3qy9_A 5 KILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQY-QHIA------DV-K-GADVAIDFSN-PNLLFP 69 (243)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBC-SCTT------TC-T-TCSEEEECSC-HHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCcee-CCHH------HH-h-CCCEEEEeCC-hHHHHH
Confidence 589999999999999999887665543 6877652 2344433 2221 22 2 7888764442 222222
Q ss_pred HHHHHHHhCCCceEEEeeC--ChHHHHHHHhCC--CCeeecCCcHHHHHHHHHHHH
Q 000968 1090 TVWALSKYFPNVKTFVRAH--DIDHGLNLEKAG--ATAVVPETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1090 i~l~aR~l~P~i~IIaRa~--d~~~~~~L~~aG--Ad~VI~p~~eaal~La~~iL~ 1141 (1207)
. ++ .....++++-+. ++++.+.++++. .-.++.|++-.+..+...+++
T Consensus 70 ~---~~-l~~g~~vVigTTG~s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~ 121 (243)
T 3qy9_A 70 L---LD-EDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILA 121 (243)
T ss_dssp H---HT-SCCCCCEEECCCSSHHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHH
T ss_pred H---HH-HhcCCceEeCCCCCCHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHH
Confidence 2 22 333455665443 345566666553 344779999888777766664
No 397
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=79.00 E-value=1.1 Score=48.70 Aligned_cols=72 Identities=19% Similarity=0.152 Sum_probs=54.2
Q ss_pred ccccc-cccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhc--CccccCEEEE
Q 000968 1008 LQDHI-ILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--GAERACAAAI 1079 (1207)
Q Consensus 1008 lk~hV-IIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~A--gI~~A~~VVi 1079 (1207)
+++++ +|.| .+-+|+.+++.|.+.|..|++.|+|++..+.........+..|.+|++..+++ ...+-|.+|-
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 34554 4445 45699999999999999999999999887766666778889999998876543 1235566654
No 398
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=78.89 E-value=1.7 Score=46.76 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=53.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.| .+-+|+.+++.|.+.|..|++++++++..+...+ ....++.+|.+|++-++++- ..+.|.+|-.
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 89 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 89 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 456666 4679999999999999999999999988766543 35678899999998776431 1245666654
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 90 A 90 (255)
T 4eso_A 90 A 90 (255)
T ss_dssp C
T ss_pred C
Confidence 3
No 399
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.78 E-value=1.6 Score=48.19 Aligned_cols=71 Identities=10% Similarity=0.093 Sum_probs=52.4
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC-----CCCEEEecCCCHHHHHhcC------cccc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL-----DLPVYFGDAGSREVLHKVG------AERA 1074 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~-----g~~vi~GDatd~evL~~Ag------I~~A 1074 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+... .. .+.++.+|.++++.++++= ..+.
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 107 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI 107 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 466665 567999999999999999999999987765432 22 3567889999998776542 1256
Q ss_pred CEEEEec
Q 000968 1075 CAAAITL 1081 (1207)
Q Consensus 1075 ~~VViat 1081 (1207)
|.+|-..
T Consensus 108 D~lvnnA 114 (297)
T 1xhl_A 108 DILVNNA 114 (297)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 7777654
No 400
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=78.78 E-value=17 Score=33.61 Aligned_cols=98 Identities=7% Similarity=0.022 Sum_probs=61.6
Q ss_pred CCCeEeecCChHHHHhh----hhCCCC-EEEecCCCHHHHHhcCc-------cccCEEEEecCCcc-hhHHHHHHHHHhC
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLP-VYFGDAGSREVLHKVGA-------ERACAAAITLDTPG-ANYRTVWALSKYF 1098 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~-vi~GDatd~evL~~AgI-------~~A~~VViatddd~-~Ni~i~l~aR~l~ 1098 (1207)
+..+.++|.|+...+.+ +..|+. .+.--.+-.+.+....- ...+.+++-..-+. .-...+..+|+..
T Consensus 2 ~~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDP 81 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHST
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCc
Confidence 34577777777655433 344552 22222233455555544 57888888765543 4467778888876
Q ss_pred --CCceEEEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1099 --PNVKTFVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1099 --P~i~IIaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
|++++|+-+.. .+......++|++.++...+
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~ 116 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSA 116 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCS
T ss_pred ccccccEEEEecCCcHHHHHHHHHhchhheecCCC
Confidence 77888777654 46777788999998885543
No 401
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=78.74 E-value=3.9 Score=46.69 Aligned_cols=135 Identities=16% Similarity=0.110 Sum_probs=80.2
Q ss_pred ccccccCC-CchHHHHHHHHHhcCC--CeEeecCChHHHHh----hhhCC---CCEEEecCCCHHHHHhcCccccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRALD---LPVYFGDAGSREVLHKVGAERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi--~vvVID~D~e~ve~----~r~~g---~~vi~GDatd~evL~~AgI~~A~~VVi 1079 (1207)
.+|.|+|. |.+|..++..+...|. +++++|.|+++++- +.... .++.+. ++. . ..+..||.||+
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t--~d~---~-~al~dADvVvi 82 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFT--SDI---K-EALTDAKYIVS 82 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEE--SCH---H-HHHTTEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEc--CCH---H-HHhCCCCEEEE
Confidence 46899997 9999999999988884 89999999887653 22211 122221 122 1 12467899999
Q ss_pred ecCCc-----------chhH----HHHHHHHHhCCCceEEEeeCChHHHH--H-HHhCCC--CeeecCCcHHHHHHHHHH
Q 000968 1080 TLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDHGL--N-LEKAGA--TAVVPETLEPSLQLAAAV 1139 (1207)
Q Consensus 1080 atddd-----------~~Ni----~i~l~aR~l~P~i~IIaRa~d~~~~~--~-L~~aGA--d~VI~p~~eaal~La~~i 1139 (1207)
+.+.+ ..|. .++..+++..|+..++..+.++-+.. . ++..|. ..|+.-+..=+.++-..+
T Consensus 83 taG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~sg~p~~rv~g~t~LDs~R~~~~l 162 (343)
T 3fi9_A 83 SGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTLAGLDSTRLQSEL 162 (343)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHHHTCCGGGEEEECCHHHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHHcCCCcceEEEecCcHHHHHHHHH
Confidence 87543 2453 34456778889985344444554321 1 234453 466644444444555555
Q ss_pred HHHcCCCHHHH
Q 000968 1140 LAQAKLPASEI 1150 (1207)
Q Consensus 1140 L~~lg~~~~ei 1150 (1207)
-+.+++++.++
T Consensus 163 a~~l~v~~~~v 173 (343)
T 3fi9_A 163 AKHFGIKQSLV 173 (343)
T ss_dssp HHHHTSCGGGE
T ss_pred HHHhCcCHHHc
Confidence 56666666443
No 402
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.69 E-value=1.6 Score=47.38 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=52.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC-----CCCEEEecCCCHHHHHhcC------cccc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL-----DLPVYFGDAGSREVLHKVG------AERA 1074 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~-----g~~vi~GDatd~evL~~Ag------I~~A 1074 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+... .. .+.++.+|.+|++.++++= ..+.
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI 87 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 466666 567999999999999999999999987765432 22 3567889999998766541 1256
Q ss_pred CEEEEec
Q 000968 1075 CAAAITL 1081 (1207)
Q Consensus 1075 ~~VViat 1081 (1207)
|.+|-..
T Consensus 88 D~lv~nA 94 (280)
T 1xkq_A 88 DVLVNNA 94 (280)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 7777654
No 403
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=78.60 E-value=2.2 Score=47.20 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=49.1
Q ss_pred cccccccc-cCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhc
Q 000968 1007 DLQDHIIL-CGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKV 1069 (1207)
Q Consensus 1007 ~lk~hVII-iG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~A 1069 (1207)
+++++++| .|. +-+|+.+++.|.+.|..|++.|++++..+...+ .....+.+|.+|++-.+++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~ 93 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRL 93 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHH
Confidence 46666554 454 459999999999999999999999998765532 2456788999999877653
No 404
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=78.57 E-value=11 Score=35.05 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=59.5
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecCCcch-hHHHHHHHHHh--CCCceE
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGA-ERACAAAITLDTPGA-NYRTVWALSKY--FPNVKT 1103 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatddd~~-Ni~i~l~aR~l--~P~i~I 1103 (1207)
...+.++|.|+...+.+ +..|+..+..-.+..+.+....- ...+.+++-..-+.. -+.++..+|+. +|++++
T Consensus 5 ~~~iLivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pi 84 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPI 84 (129)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCE
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeE
Confidence 35678888887655433 34566533333334455544332 256777765554443 35677778774 478888
Q ss_pred EEeeCC--hHHHHHHHhCCCCeeecCCc
Q 000968 1104 FVRAHD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1104 IaRa~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
|+-+.. ........++|++..+..-+
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (129)
T 3h1g_A 85 IMITAEGGKAEVITALKAGVNNYIVKPF 112 (129)
T ss_dssp EEEESCCSHHHHHHHHHHTCCEEEESCC
T ss_pred EEEeCCCChHHHHHHHHcCccEEEeCCC
Confidence 887765 44567778899998775443
No 405
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=78.47 E-value=2.3 Score=48.14 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=68.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
.++|+|.|..|+.+++.+++.|++++++|.+++.... +-.+ . +.+|..|.+.+.+.- ++.|.|+...++.. ...
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~-~~a~-~-~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~--~~~ 74 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEACAG-QVGE-L-VVGEFLDEGALLRFA-EGLALVTYEFENVP--VEA 74 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCTTCGGG-GTSE-E-EECCTTCHHHHHHHH-TTCSEEEECCTTCC--HHH
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCChHH-Hhhc-e-EecCCCCHHHHHHHH-hCCCEEEECCCCcC--HHH
Confidence 3789999999999999999999999999987654211 1111 2 578888888877655 78888776665542 223
Q ss_pred HHHHHHh---CCCceEEEeeCChHHH-HHHHhCCCC
Q 000968 1091 VWALSKY---FPNVKTFVRAHDIDHG-LNLEKAGAT 1122 (1207)
Q Consensus 1091 ~l~aR~l---~P~i~IIaRa~d~~~~-~~L~~aGAd 1122 (1207)
+..+.+. +|+...+....|.... ..++++|+.
T Consensus 75 ~~~l~~~g~~g~~~~~~~~~~dK~~~k~~l~~~gip 110 (369)
T 3aw8_A 75 ARRLEGRLPLYPPAKALEVAQDRLREKTFFQGLGVP 110 (369)
T ss_dssp HHHHHHHSCBSSCHHHHHHHTCHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCcCCCHHHHHHhcCHHHHHHHHHHCCCC
Confidence 2233322 3444455555665433 344666654
No 406
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=78.43 E-value=3.8 Score=45.89 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=53.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|++|+.+++.|...|.++++.|++++ +. +.. .-.+-.+. +.++|.|+++++....+..
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~---~~~~l~el-----l~~aDvV~l~~P~~~~t~~ 190 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----PWR---FTNSLEEA-----LREARAAVCALPLNKHTRG 190 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----SSC---CBSCSHHH-----HTTCSEEEECCCCSTTTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----Ccc---cCCCHHHH-----HhhCCEEEEeCcCchHHHH
Confidence 3578999999999999999999999999998875 11 211 11122233 3478999999987644322
Q ss_pred HH--HHHHHhCCCceEE
Q 000968 1090 TV--WALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i~--l~aR~l~P~i~II 1104 (1207)
++ ..+..+.|+..+|
T Consensus 191 ~i~~~~l~~mk~gaili 207 (303)
T 1qp8_A 191 LVKYQHLALMAEDAVFV 207 (303)
T ss_dssp CBCHHHHTTSCTTCEEE
T ss_pred HhCHHHHhhCCCCCEEE
Confidence 22 3344555654333
No 407
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.34 E-value=1.6 Score=47.45 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=52.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC-----CCCEEEecCCCHHHHHhcCc------ccc
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL-----DLPVYFGDAGSREVLHKVGA------ERA 1074 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~-----g~~vi~GDatd~evL~~AgI------~~A 1074 (1207)
.++|.| .|-+|+.+++.|.+.|..|++++++++..+.. +.. .+.++.+|.+|++-++++=- .+.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 92 (281)
T 3svt_A 13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRL 92 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 466666 56799999999999999999999998876543 222 35678899999987654411 245
Q ss_pred CEEEEecC
Q 000968 1075 CAAAITLD 1082 (1207)
Q Consensus 1075 ~~VViatd 1082 (1207)
|.+|-...
T Consensus 93 d~lv~nAg 100 (281)
T 3svt_A 93 HGVVHCAG 100 (281)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 77776543
No 408
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=78.31 E-value=1.7 Score=46.21 Aligned_cols=71 Identities=17% Similarity=0.071 Sum_probs=53.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcCc------cccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVGA------ERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~AgI------~~A~~V 1077 (1207)
.++|.|. |.+|+.+++.|.+.|..+++++++++..+... .. ...++.+|.+|++.++++-- .+.|.+
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 90 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL 90 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4666665 67899999999999999999999988765442 22 35678899999987765421 256787
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 91 i~~A 94 (253)
T 3qiv_A 91 VNNA 94 (253)
T ss_dssp EECC
T ss_pred EECC
Confidence 7754
No 409
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=78.28 E-value=2.1 Score=45.98 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=53.4
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh-------hCCCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-------~~g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+... ...+.++.+|.+|++.++++= ..+.|.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 88 (263)
T 3ai3_A 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADI 88 (263)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4667764 77999999999999999999999987665432 123567889999998776542 125788
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 89 lv~~Ag 94 (263)
T 3ai3_A 89 LVNNAG 94 (263)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776553
No 410
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=78.25 E-value=1.8 Score=45.82 Aligned_cols=71 Identities=8% Similarity=0.089 Sum_probs=53.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCC-CEEEecCCCHHHHHhcC-----ccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDL-PVYFGDAGSREVLHKVG-----AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~-~vi~GDatd~evL~~Ag-----I~~A~~VVia 1080 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+...+ ... .++.+|.+|++.++++- ..+.|.+|-.
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~ 92 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNS 92 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEEC
Confidence 466665 5789999999999999999999999887654432 133 67889999999887542 1356777765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 93 A 93 (254)
T 2wsb_A 93 A 93 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 411
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=78.23 E-value=4.4 Score=36.23 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=58.9
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhC--CCceEEEe
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYF--PNVKTFVR 1106 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~--P~i~IIaR 1106 (1207)
.++++|.|+...+.+ +..|+.+..-+ +-.+.+....-...+.+++-...+. .....+..+|+.. |++++|+.
T Consensus 3 ~iliv~~~~~~~~~l~~~l~~~g~~v~~~~-~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~ 81 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLTAAGFKVIWLV-DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLF 81 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCcEEEEec-CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEE
Confidence 466677776554332 34566555322 3344554444456788887765543 3466777888776 78888887
Q ss_pred eCChHHHHHHHhCCCCeeecCCc
Q 000968 1107 AHDIDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~d~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+...+.. ...+.|++.++...+
T Consensus 82 ~~~~~~~-~~~~~g~~~~l~kp~ 103 (119)
T 2j48_A 82 LGEPPVD-PLLTAQASAILSKPL 103 (119)
T ss_dssp ESSCCSS-HHHHHHCSEECSSCS
T ss_pred eCCCCch-hhhhcCHHHhccCCC
Confidence 7665544 788899998885543
No 412
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=78.22 E-value=3.9 Score=49.19 Aligned_cols=75 Identities=11% Similarity=-0.106 Sum_probs=57.5
Q ss_pred ccccccCCCchHHH-HHHHHHhcCCCeEeecCC--hHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVR--SDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~gi~vvVID~D--~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.|+.++|.|..|.. +++.|.+.|+.|.+.|.. +...+.+++.|++++.|. +++.+ ...+|.||....-+..
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~--~~~~~----~~~~d~vV~Spgi~~~ 93 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGY--LIAHL----QPAPDLVVVGNAMKRG 93 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESC--CGGGG----CSCCSEEEECTTCCTT
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCC--CHHHc----CCCCCEEEECCCcCCC
Confidence 57999999999996 799999999999999986 345677888999999984 33322 1468888887665555
Q ss_pred hHHH
Q 000968 1087 NYRT 1090 (1207)
Q Consensus 1087 Ni~i 1090 (1207)
|-.+
T Consensus 94 ~p~l 97 (524)
T 3hn7_A 94 MDVI 97 (524)
T ss_dssp SHHH
T ss_pred CHHH
Confidence 5443
No 413
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=78.11 E-value=7.8 Score=36.18 Aligned_cols=95 Identities=9% Similarity=-0.054 Sum_probs=56.9
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc--chhHHHHHHHHHhCCCceEEEe
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP--GANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd--~~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
..++++|.|+...+.+ ...|+.++.--.+-.+.+....-...+.+++-..-+ ......+..+|+. |++++|+-
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~l 88 (140)
T 3cg0_A 10 PGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFI 88 (140)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEE
Confidence 4456666655443322 233554442122223444444445678888876553 3456777888887 88888877
Q ss_pred eCC--hHHHHHHHhCCCCeeecCC
Q 000968 1107 AHD--IDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1107 a~d--~~~~~~L~~aGAd~VI~p~ 1128 (1207)
+.. .+......++|++.++...
T Consensus 89 s~~~~~~~~~~~~~~g~~~~l~kp 112 (140)
T 3cg0_A 89 TSSQDVETFQRAKRVNPFGYLAKP 112 (140)
T ss_dssp ECCCCHHHHHHHHTTCCSEEEEES
T ss_pred ecCCCHHHHHHHHhcCCCEEEeCC
Confidence 764 4556678899999888543
No 414
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=78.10 E-value=2 Score=45.18 Aligned_cols=72 Identities=13% Similarity=0.033 Sum_probs=54.1
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-------hCCCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-------~~g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+... ...+.++.+|.+|++.++++= ..+.|.
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 88 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI 88 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 466666 578999999999999999999999987665432 124667889999998876652 125788
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 89 vi~~Ag 94 (248)
T 2pnf_A 89 LVNNAG 94 (248)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 777553
No 415
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=78.09 E-value=2.8 Score=50.59 Aligned_cols=84 Identities=24% Similarity=0.253 Sum_probs=56.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.++++.|+++.. +.+...|... .+-.+. +.+||.|+++++....+..
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~----~~l~e~-----~~~aDvV~l~~P~~~~t~~ 212 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIEL----LSLDDL-----LARADFISVHLPKTPETAG 212 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEE----CCHHHH-----HHHCSEEEECCCCSTTTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEE----cCHHHH-----HhcCCEEEECCCCchHHHH
Confidence 46889999999999999999999999999998743 3344556532 122223 3468999999987633332
Q ss_pred HH--HHHHHhCCCceE
Q 000968 1090 TV--WALSKYFPNVKT 1103 (1207)
Q Consensus 1090 i~--l~aR~l~P~i~I 1103 (1207)
++ ..+..+.|+..+
T Consensus 213 ~i~~~~~~~~k~g~il 228 (529)
T 1ygy_A 213 LIDKEALAKTKPGVII 228 (529)
T ss_dssp CBCHHHHTTSCTTEEE
T ss_pred HhCHHHHhCCCCCCEE
Confidence 22 123345555433
No 416
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}
Probab=78.08 E-value=0.34 Score=36.95 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=26.0
Q ss_pred ChHHHHHHhhccccCcHHHHHHHHHhcCC
Q 000968 710 PGPASIVIGNGLALSSTAVVLQVLQERGE 738 (1207)
Q Consensus 710 s~~~ALlLGailS~TStAVVl~IL~elg~ 738 (1207)
+|..++++|+++++|+|+.++.++++.+.
T Consensus 2 ~~~~~llfGAiis~TDpVavlaif~~~~v 30 (33)
T 2l0e_A 2 KKKDNLLFGSIISAVDPVAVLAVFEEIHK 30 (33)
T ss_dssp CCCCCCTTHHHHTTCCHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHccCCChHHHHHHHHHcCC
Confidence 45668899999999999999999999876
No 417
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=78.08 E-value=2.2 Score=46.25 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=54.3
Q ss_pred ccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhCC----CCEEEecCCCHHHHHhcC------c
Q 000968 1008 LQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD----LPVYFGDAGSREVLHKVG------A 1071 (1207)
Q Consensus 1008 lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~g----~~vi~GDatd~evL~~Ag------I 1071 (1207)
+++ .++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +..+ +.++.+|.++++.++++- .
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 443 456665 57899999999999999999999998776543 2222 457789999998776542 1
Q ss_pred cccCEEEEecC
Q 000968 1072 ERACAAAITLD 1082 (1207)
Q Consensus 1072 ~~A~~VViatd 1082 (1207)
...|.+|-...
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 25788777553
No 418
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=78.06 E-value=2.5 Score=45.35 Aligned_cols=72 Identities=13% Similarity=-0.031 Sum_probs=53.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---------CCCCEEEecCCCHHHHHhcCc------ccc
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---------LDLPVYFGDAGSREVLHKVGA------ERA 1074 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---------~g~~vi~GDatd~evL~~AgI------~~A 1074 (1207)
.++|.|. +.+|+.+++.|.+.|..|++++++++..+...+ ....++.+|.++++-++++=- .+.
T Consensus 9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAV 88 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 4666665 679999999999999999999999887654422 346688899999887655411 245
Q ss_pred CEEEEecC
Q 000968 1075 CAAAITLD 1082 (1207)
Q Consensus 1075 ~~VViatd 1082 (1207)
|.+|-...
T Consensus 89 D~lvnnAg 96 (250)
T 3nyw_A 89 DILVNAAA 96 (250)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 66665543
No 419
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.03 E-value=2.1 Score=45.71 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=52.6
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+... .. .+.++.+|.+|++.++++- ..+.|.+
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 88 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDIL 88 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 466666 567999999999999999999999988765432 22 3567889999998776541 1256777
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 89 v~nA 92 (247)
T 2jah_A 89 VNNA 92 (247)
T ss_dssp EECC
T ss_pred EECC
Confidence 7644
No 420
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.02 E-value=2.5 Score=46.14 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=55.0
Q ss_pred cccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-------hCCCCEEEecCCCHHHHHhcC------c
Q 000968 1007 DLQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------A 1071 (1207)
Q Consensus 1007 ~lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-------~~g~~vi~GDatd~evL~~Ag------I 1071 (1207)
++++ .++|.| .|.+|+.+++.|.+.|..|++++++++..+... ...+.++.+|.++++.++++- .
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 3443 466666 578999999999999999999999987665332 234678899999998776441 1
Q ss_pred cccCEEEEecC
Q 000968 1072 ERACAAAITLD 1082 (1207)
Q Consensus 1072 ~~A~~VViatd 1082 (1207)
.+.|.+|-...
T Consensus 103 g~id~li~~Ag 113 (302)
T 1w6u_A 103 GHPNIVINNAA 113 (302)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 24578776553
No 421
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=78.00 E-value=3.8 Score=44.77 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=42.3
Q ss_pred cccccccc-cCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhCC--CCEEEecCCCHHHHH
Q 000968 1007 DLQDHIIL-CGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLH 1067 (1207)
Q Consensus 1007 ~lk~hVII-iG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~g--~~vi~GDatd~evL~ 1067 (1207)
+++++++| -|. +-+|+.+++.|.+.|..|++.|++++..+.. +..| ..++.+|.++++-.+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~ 72 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVE 72 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Confidence 45666544 454 5599999999999999999999999876544 2333 234456666665544
No 422
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=77.82 E-value=2.3 Score=44.47 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=55.4
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh--CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~--~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
..++|.| .|.+|+.+++.|.+.|..+++++++++..+.... .+..++.+|.++++.++++- ..+.|.+|-.
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ 85 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNN 85 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3567775 5779999999999999999999999887765533 26788999999998776531 1256777765
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 86 Ag 87 (234)
T 2ehd_A 86 AG 87 (234)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 423
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.79 E-value=1.6 Score=49.48 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=56.8
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCH-HHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSR-EVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~-evL~~AgI~~A~~VViatdd 1083 (1207)
+.++|.|.|.+|...++.++..|..+++++.++++.+.+++.|...++ |..++ +..++.. ..+|.++-++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~~-~~~D~vid~~g~ 253 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYF-DTFDLIVVCASS 253 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSC-SCEEEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEE-cCcCchHHHHHhh-cCCCEEEECCCC
Confidence 479999999999999999999999999999999999888888876554 33333 4444443 578898888876
No 424
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=77.73 E-value=8.3 Score=39.12 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=67.2
Q ss_pred CCCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
...+.++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-..-+. .-+..+..+|+.+|++++|+.
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~l 82 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSAGFEVET-FDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFI 82 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEE-ESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCceEEE-cCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 34678888887765433 345776653 234456677776677888888766554 346788889999999998888
Q ss_pred eCCh--HHHHHHHhCCCCeeecCCc
Q 000968 1107 AHDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1107 a~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
+... +......++||+..+...+
T Consensus 83 s~~~~~~~~~~a~~~Ga~~~l~Kp~ 107 (208)
T 1yio_A 83 TAHGDIPMTVRAMKAGAIEFLPKPF 107 (208)
T ss_dssp ESCTTSCCCHHHHHTTEEEEEESSC
T ss_pred eCCCCHHHHHHHHHCCCcEEEeCCC
Confidence 7654 4667778899988775443
No 425
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=77.69 E-value=2.5 Score=49.50 Aligned_cols=71 Identities=15% Similarity=0.122 Sum_probs=54.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHH--HHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDR--VAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~--ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.++.|+|.|..|...++.|.++|+.|++.|..+.. ...++ .|.++..|.- +++.+. .++.||+...-+..|
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~-~~~~~~-----~~d~vV~s~gi~~~~ 78 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSL-NDEWLM-----AADLIVASPGIALAH 78 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSC-CHHHHH-----TCSEEEECTTSCTTC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCC-cHHHhc-----cCCEEEeCCCCCCCC
Confidence 47899999999999999999999999999986432 23456 7999988873 355554 477888876544334
No 426
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=77.65 E-value=1.7 Score=46.30 Aligned_cols=71 Identities=17% Similarity=0.056 Sum_probs=52.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+...+ ..+.++.+|.++++.++++-- .+.|.+|-.
T Consensus 14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~ 93 (265)
T 2o23_A 14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC 93 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 466665 5679999999999999999999999776554322 246778899999987765411 257777765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 94 A 94 (265)
T 2o23_A 94 A 94 (265)
T ss_dssp C
T ss_pred C
Confidence 4
No 427
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=77.64 E-value=11 Score=34.52 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=61.8
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ ...|+.+.. -.+-.+.+....-...+.+++-..-+. .-...+..+|+.+|++++|+-+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~-~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEGYQTFQ-AANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMT 82 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEE-ESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEEEE-eCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEE
Confidence 3577777777654433 344665543 223345555554456788888765543 3467778888889999988877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......++|++..+...+
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP~ 106 (124)
T 1srr_A 83 AYGELDMIQESKELGALTHFAKPF 106 (124)
T ss_dssp SSCCHHHHHHHHHHTCCCEEESSC
T ss_pred ccCchHHHHHHHhcChHhhccCCC
Confidence 54 44666777889888775443
No 428
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=77.56 E-value=2.5 Score=45.78 Aligned_cols=75 Identities=17% Similarity=0.113 Sum_probs=53.3
Q ss_pred cccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-----h--CCCCEEEecCCCHHHHHhcC------c
Q 000968 1007 DLQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-----A--LDLPVYFGDAGSREVLHKVG------A 1071 (1207)
Q Consensus 1007 ~lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-----~--~g~~vi~GDatd~evL~~Ag------I 1071 (1207)
++++ .++|.| .|.+|+.+++.|.+.|..|++++++++..+... . ....++.+|.++++.++++= .
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4444 456665 567999999999999999999999987664331 1 23556789999998775441 1
Q ss_pred cccCEEEEec
Q 000968 1072 ERACAAAITL 1081 (1207)
Q Consensus 1072 ~~A~~VViat 1081 (1207)
.+.|.+|-..
T Consensus 98 g~iD~lvnnA 107 (267)
T 1vl8_A 98 GKLDTVVNAA 107 (267)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2567777654
No 429
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.53 E-value=2.1 Score=46.10 Aligned_cols=71 Identities=11% Similarity=0.031 Sum_probs=52.9
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.|. +.+|+.+++.|.+.|..|++++++++..+... .. ...++.+|.+|++-++++= ..+.|.+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 92 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV 92 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 4666665 56999999999999999999999988765442 22 4667889999998775542 1256777
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 93 v~nA 96 (264)
T 3ucx_A 93 INNA 96 (264)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 430
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=77.53 E-value=1 Score=51.53 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=54.5
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHHH
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~i 1090 (1207)
.+-|+|+|++|+.+++.|...|.++++.|++++.. .....|... ..+.+.+ +.++|.|++.++....+..+
T Consensus 170 tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~----~~~l~el----l~~aDvV~l~~P~t~~t~~l 240 (347)
T 1mx3_A 170 TLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQR----VSTLQDL----LFHSDCVTLHCGLNEHNHHL 240 (347)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEE----CSSHHHH----HHHCSEEEECCCCCTTCTTS
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCee----cCCHHHH----HhcCCEEEEcCCCCHHHHHH
Confidence 58899999999999999999999999999876532 122334321 1123222 24689999988765333211
Q ss_pred --HHHHHHhCCCceEEE
Q 000968 1091 --VWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1091 --~l~aR~l~P~i~IIa 1105 (1207)
...+..+-|+..+|-
T Consensus 241 i~~~~l~~mk~gailIN 257 (347)
T 1mx3_A 241 INDFTVKQMRQGAFLVN 257 (347)
T ss_dssp BSHHHHTTSCTTEEEEE
T ss_pred hHHHHHhcCCCCCEEEE
Confidence 233445556644443
No 431
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.51 E-value=1.6 Score=48.13 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=53.9
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHH-----HHhh-hhCCCCEEEecCCCHHHHHhcCcc-ccCEEEEec
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDR-----VAIG-RALDLPVYFGDAGSREVLHKVGAE-RACAAAITL 1081 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~-----ve~~-r~~g~~vi~GDatd~evL~~AgI~-~A~~VViat 1081 (1207)
.+++|.| .|-+|+.+++.|.+.|++|++++++++. .+.+ ...++.++.||.++++.+.++=-. +.|.||-+.
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A 94 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 94 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence 4577776 5999999999999999999999987653 2222 134677899999999888765221 468888665
Q ss_pred C
Q 000968 1082 D 1082 (1207)
Q Consensus 1082 d 1082 (1207)
.
T Consensus 95 ~ 95 (335)
T 1rpn_A 95 A 95 (335)
T ss_dssp S
T ss_pred c
Confidence 4
No 432
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=77.51 E-value=2 Score=46.55 Aligned_cols=73 Identities=15% Similarity=0.026 Sum_probs=54.9
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~~VVi 1079 (1207)
..++|.|. |-+|+.+++.|.+.|..|++++++++..+.... ....++.+|.++++.++++-- .+.|.+|-
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~ 85 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVN 85 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 35677765 779999999999999999999999887665532 356788999999988765421 14577766
Q ss_pred ecC
Q 000968 1080 TLD 1082 (1207)
Q Consensus 1080 atd 1082 (1207)
...
T Consensus 86 ~Ag 88 (281)
T 3m1a_A 86 NAG 88 (281)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 433
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=77.50 E-value=2.6 Score=46.55 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=53.8
Q ss_pred cccccC-CCchHHHHHHHHHhc---C---CCeEeecCCh-----HHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSER---L---IPFVALDVRS-----DRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~---g---i~vvVID~D~-----e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~V 1077 (1207)
+++|.| .|.+|+.+++.|.+. | ++|+++++++ +..+.+. ..++.++.||.+|++.+.++= ..+|.|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~V 80 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-RGVDAI 80 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-TTCCEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-cCCCEE
Confidence 367777 599999999999986 7 8999998754 2222221 246778999999999988763 678998
Q ss_pred EEecC
Q 000968 1078 AITLD 1082 (1207)
Q Consensus 1078 Viatd 1082 (1207)
|-+..
T Consensus 81 ih~A~ 85 (337)
T 1r6d_A 81 VHFAA 85 (337)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 87764
No 434
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=77.47 E-value=2 Score=46.53 Aligned_cols=71 Identities=10% Similarity=-0.005 Sum_probs=53.6
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh--CCCCEEEecCCCHHHHHhcC------ccccCEEEEec
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKVG------AERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~--~g~~vi~GDatd~evL~~Ag------I~~A~~VViat 1081 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+...+ .+..++.+|.+|++.++++- ..+.|.+|-..
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA 90 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA 90 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 466666 5679999999999999999999999887765432 24678899999998876541 12567777644
No 435
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=77.44 E-value=1.8 Score=46.34 Aligned_cols=71 Identities=11% Similarity=0.000 Sum_probs=52.4
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----h--CCCCEEEecCCCHHHHHhcC-------ccccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A--LDLPVYFGDAGSREVLHKVG-------AERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~--~g~~vi~GDatd~evL~~Ag-------I~~A~~ 1076 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+... . ..+.++.+|.+|++.++++= ..+.|.
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~ 86 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDV 86 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceE
Confidence 456665 567999999999999999999999987765432 1 23567889999998765431 235677
Q ss_pred EEEec
Q 000968 1077 AAITL 1081 (1207)
Q Consensus 1077 VViat 1081 (1207)
+|-..
T Consensus 87 lvnnA 91 (260)
T 2qq5_A 87 LVNNA 91 (260)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77665
No 436
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=77.32 E-value=1.9 Score=46.38 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=54.5
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcCc------cccCE
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVGA------ERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~AgI------~~A~~ 1076 (1207)
..++|.| .|.+|+.+++.|.+.|..+++++++++..+... .. .+.++.+|.++++.++++-- .+.|.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 109 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV 109 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3566776 477999999999999999999999988765442 22 35678899999988765421 25678
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 110 lv~~Ag 115 (262)
T 3rkr_A 110 LVNNAG 115 (262)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776554
No 437
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=77.24 E-value=2 Score=45.83 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=53.7
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++-++++=- .+.|.+|-.
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 87 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNN 87 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 4666665 679999999999999999999999987765532 345677899999987765411 256777765
Q ss_pred cC
Q 000968 1081 LD 1082 (1207)
Q Consensus 1081 td 1082 (1207)
..
T Consensus 88 Ag 89 (247)
T 3rwb_A 88 AS 89 (247)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 438
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=77.23 E-value=11 Score=35.19 Aligned_cols=96 Identities=8% Similarity=0.025 Sum_probs=61.3
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCC-CHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEee
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAG-SREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDat-d~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
.++++|.|+...+.+ ...+.....+.+. -.+.++...-...+.+++-..-+. .-+..+..+|+.+|++++|+-+
T Consensus 5 ~Ilivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls 84 (133)
T 3b2n_A 5 SLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVT 84 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHSSEEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhhCCCcEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEe
Confidence 477888887655433 2233112223333 345555554456788887665543 3467788888889999998877
Q ss_pred CC--hHHHHHHHhCCCCeeecCCc
Q 000968 1108 HD--IDHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d--~~~~~~L~~aGAd~VI~p~~ 1129 (1207)
.. .+......+.|++..+....
T Consensus 85 ~~~~~~~~~~~~~~ga~~~l~Kp~ 108 (133)
T 3b2n_A 85 TFKRPGYFEKAVVNDVDAYVLKER 108 (133)
T ss_dssp SCCCHHHHHHHHHTTCSEEEETTS
T ss_pred cCCCHHHHHHHHHcCCcEEEECCC
Confidence 54 44677778899998885543
No 439
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.22 E-value=1.9 Score=46.28 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=52.7
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcC------c-cccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------A-ERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~Ag------I-~~A~~ 1076 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +.. ++.++.+|.+|++.++++= . .+.|.
T Consensus 11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~ 90 (260)
T 2ae2_A 11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNI 90 (260)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 466666 56799999999999999999999998766543 222 3567889999998765542 1 35677
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 91 lv~~Ag 96 (260)
T 2ae2_A 91 LVNNAG 96 (260)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776543
No 440
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.97 E-value=2.5 Score=45.66 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=53.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+...+ ....++.+|.+|++.++++- ..+.|.+|-.
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnn 87 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHF 87 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEG
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 466666 4679999999999999999999999887765533 24667889999998776541 1245777754
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 88 A 88 (263)
T 2a4k_A 88 A 88 (263)
T ss_dssp G
T ss_pred C
Confidence 3
No 441
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=76.57 E-value=3.7 Score=46.36 Aligned_cols=91 Identities=12% Similarity=0.199 Sum_probs=64.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCC--C-HH----HHHhcCccccCEEEEec
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAG--S-RE----VLHKVGAERACAAAITL 1081 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDat--d-~e----vL~~AgI~~A~~VViat 1081 (1207)
+.++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...++ |.. + .+ +.+..+ ..+|.++-++
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~-~g~D~vid~~ 250 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL-QISKESPQEIARKVEGQLG-CKPEVTIECT 250 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHHT-SCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE-cCcccccchHHHHHHHHhC-CCCCEEEECC
Confidence 468999999999999999999999 899999999999999988876544 222 1 22 223345 6789998888
Q ss_pred CCcchhHHHHHHHHHhCCCceEEE
Q 000968 1082 DTPGANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1082 ddd~~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
..+.. +...++-+.|.-+++.
T Consensus 251 g~~~~---~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 251 GAEAS---IQAGIYATRSGGTLVL 271 (356)
T ss_dssp CCHHH---HHHHHHHSCTTCEEEE
T ss_pred CChHH---HHHHHHHhcCCCEEEE
Confidence 76422 2223444555555554
No 442
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=76.54 E-value=3.6 Score=46.95 Aligned_cols=40 Identities=15% Similarity=0.049 Sum_probs=35.7
Q ss_pred cccccCCCchHHHHHHHHHhcC-------CCeEeecCChH-----HHHhhhh
Q 000968 1011 HIILCGFGRVGQIIAQLLSERL-------IPFVALDVRSD-----RVAIGRA 1050 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~g-------i~vvVID~D~e-----~ve~~r~ 1050 (1207)
++.|+|.|.+|..++..|.+.| .+|+++|++++ +.+.++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~ 74 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINN 74 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHh
Confidence 6899999999999999999988 99999999988 7776654
No 443
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=76.53 E-value=3.8 Score=46.61 Aligned_cols=93 Identities=12% Similarity=0.168 Sum_probs=65.4
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEec----CCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGD----AGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GD----atd~evL~~AgI~~A~~VViatddd 1084 (1207)
..|+|.|.|.+|...++.++..|. .|+++|.++++.+.+++.|...++-- ..-.+.+++..-..+|.++-++..+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~ 274 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNV 274 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCH
Confidence 468999999999999999999998 89999999999999999887655421 1223444444333899998888774
Q ss_pred chhHHHHHHHHHhCCC-ceEEE
Q 000968 1085 GANYRTVWALSKYFPN-VKTFV 1105 (1207)
Q Consensus 1085 ~~Ni~i~l~aR~l~P~-i~IIa 1105 (1207)
.. ....++-+.|. -+++.
T Consensus 275 ~~---~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 275 SV---MRAALECCHKGWGTSVI 293 (378)
T ss_dssp HH---HHHHHHTBCTTTCEEEE
T ss_pred HH---HHHHHHHhhccCCEEEE
Confidence 32 22234445553 44444
No 444
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=76.49 E-value=1.2 Score=48.83 Aligned_cols=110 Identities=11% Similarity=-0.033 Sum_probs=66.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh-CCC--CEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDL--PVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~-~g~--~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.+++|+|.|.+|+.++..|.+.|.+++++++++++.+.+.+ .+. .+.. .+.+.+.+ .++|.+|.+++....
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~---~~~~~~~~---~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA---LSMDELEG---HEFDLIINATSSGIS 193 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE---CCSGGGTT---CCCSEEEECCSCGGG
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeE---ecHHHhcc---CCCCEEEECCCCCCC
Confidence 46899999999999999999999999999999988765532 111 2222 22222222 589999999876542
Q ss_pred h-HHHHHHHHH-hCCCceEEEeeCCh---HHHHHHHhCCCCeeecC
Q 000968 1087 N-YRTVWALSK-YFPNVKTFVRAHDI---DHGLNLEKAGATAVVPE 1127 (1207)
Q Consensus 1087 N-i~i~l~aR~-l~P~i~IIaRa~d~---~~~~~L~~aGAd~VI~p 1127 (1207)
. ..-+ -.. ..|...++=..+.+ ......++.|+..++.-
T Consensus 194 ~~~~~i--~~~~l~~~~~v~D~~y~p~~t~~~~~a~~~G~~~~~~G 237 (271)
T 1nyt_A 194 GDIPAI--PSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADG 237 (271)
T ss_dssp TCCCCC--CGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEECT
T ss_pred CCCCCC--CHHHcCCCCEEEEeccCCcCCHHHHHHHHcCCCeecCC
Confidence 1 0000 011 22333333333332 34566788898645533
No 445
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=76.48 E-value=7.8 Score=43.90 Aligned_cols=125 Identities=12% Similarity=0.123 Sum_probs=79.9
Q ss_pred cccccccCCCchHHHHHHHHH-h-cCCCeE-eecCChHHHHhhh-hCCC-CEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1009 QDHIILCGFGRVGQIIAQLLS-E-RLIPFV-ALDVRSDRVAIGR-ALDL-PVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~-~-~gi~vv-VID~D~e~ve~~r-~~g~-~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
+-++.|+|+|.+|+..++.|. . .+..++ +.|.|+++.+... ..|+ ...+.| -.+.|.. .+.|+|++++++
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~--~~~ll~~---~~~D~V~i~tp~ 97 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYND--YHDLIND---KDVEVVIITASN 97 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESS--HHHHHHC---TTCCEEEECSCG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCEEEEcCCc
Confidence 357999999999999999998 3 356655 7899999887654 3453 233432 2334432 467999999988
Q ss_pred cchhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCe-ee--cCCcHHHHHHHHHHHH
Q 000968 1084 PGANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATA-VV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~-VI--~p~~eaal~La~~iL~ 1141 (1207)
... ...+..+-+.+ .++++. +.+.++.+.+ ++.|... .+ ...+....+-+..++.
T Consensus 98 ~~h-~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~ 162 (357)
T 3ec7_A 98 EAH-ADVAVAALNAN--KYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIID 162 (357)
T ss_dssp GGH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHCC--CCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHh
Confidence 643 44444444444 467774 4566665555 4457644 22 4455666666666665
No 446
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=76.47 E-value=10 Score=39.97 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=60.3
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-hHHHHHHHHHhCCCceEEEee
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-Ni~i~l~aR~l~P~i~IIaRa 1107 (1207)
..+.++|.|+...+.+ ...|+.+.. -.+-.+.++.+.-...|.+++-..-+.. -+.++..+|+.+|++++|+-+
T Consensus 24 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt 102 (250)
T 3r0j_A 24 ARVLVVDDEANIVELLSVSLKFQGFEVYT-ATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLT 102 (250)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEE-ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEE
Confidence 3455566555443322 234554442 2223344554444567888887765543 467888899999999988877
Q ss_pred CCh--HHHHHHHhCCCCeeecCCc
Q 000968 1108 HDI--DHGLNLEKAGATAVVPETL 1129 (1207)
Q Consensus 1108 ~d~--~~~~~L~~aGAd~VI~p~~ 1129 (1207)
... +......++||+..+...+
T Consensus 103 ~~~~~~~~~~~~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 103 ARDSLQDKIAGLTLGGDDYVTKPF 126 (250)
T ss_dssp CSTTHHHHHHHHTSTTCEEEESSC
T ss_pred CCCCHHHHHHHHHcCCcEEEeCCC
Confidence 654 5667778999998885544
No 447
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=76.44 E-value=4.5 Score=45.47 Aligned_cols=74 Identities=8% Similarity=0.117 Sum_probs=56.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHH---HHHh-cCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSRE---VLHK-VGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~e---vL~~-AgI~~A~~VViatddd 1084 (1207)
+.++|.|.|.+|...++.++..|. .+++++.++++.+.+++.|...+. |..+++ .+.+ .+-..+|.++-++...
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~v~~~~~g~g~D~vid~~g~~ 247 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI-NPFEEDVVKEVMDITDGNGVDVFLEFSGAP 247 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTSCEEEEEECSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE-CCCCcCHHHHHHHHcCCCCCCEEEECCCCH
Confidence 478999999999999999999999 999999999999988888876543 333322 2322 3334688888887753
No 448
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=76.41 E-value=2.6 Score=45.94 Aligned_cols=72 Identities=17% Similarity=0.028 Sum_probs=54.9
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEE
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVi 1079 (1207)
..++|.|. +-+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++-++++= ..+.|.+|-
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 108 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFN 108 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34566665 569999999999999999999999887765532 36788999999998776541 125677776
Q ss_pred ec
Q 000968 1080 TL 1081 (1207)
Q Consensus 1080 at 1081 (1207)
..
T Consensus 109 nA 110 (272)
T 4dyv_A 109 NA 110 (272)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 449
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=76.39 E-value=3.6 Score=45.20 Aligned_cols=70 Identities=13% Similarity=0.085 Sum_probs=56.4
Q ss_pred ccccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCC-HHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd-~evL~~AgI~~A~~VViatdd 1083 (1207)
+.++|.|. |.+|+..++.++..|..+++++.++++.+.+++.|...+. |..+ ++..++. ..+|.++- +..
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~--~~~d~vid-~g~ 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAW--GGLDLVLE-VRG 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHT--TSEEEEEE-CSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEE-ECCcchhHHHHh--cCceEEEE-CCH
Confidence 47899998 9999999999999999999999999998888888876554 4444 5555554 67888887 765
No 450
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=76.34 E-value=3.6 Score=48.66 Aligned_cols=72 Identities=21% Similarity=0.244 Sum_probs=55.1
Q ss_pred ccccccCCCchHHH-HHHHHHhcCCCeEeecCChH-HHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVRSD-RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~gi~vvVID~D~e-~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.++.++|.|..|.. +++.|.+.|..|.+.|..+. ..+.++..|+.+..|... +. +..|++||+...-+..|
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~--~~-----~~~a~~vv~s~~i~~~~ 91 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE--EH-----IEGASVVVVSSAIKDDN 91 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG--GG-----GTTCSEEEECTTSCTTC
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH--HH-----cCCCCEEEECCCCCCCC
Confidence 47899999999997 99999999999999998643 446677889999888532 22 35688888765544444
Q ss_pred H
Q 000968 1088 Y 1088 (1207)
Q Consensus 1088 i 1088 (1207)
-
T Consensus 92 ~ 92 (475)
T 1p3d_A 92 P 92 (475)
T ss_dssp H
T ss_pred H
Confidence 3
No 451
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=76.33 E-value=2.1 Score=45.95 Aligned_cols=72 Identities=14% Similarity=0.022 Sum_probs=51.6
Q ss_pred ccccccCCC-c--hHHHHHHHHHhcCCCeEeecCChHHHHhh---hh----CCCCEEEecCCCHHHHHhcCc------cc
Q 000968 1010 DHIILCGFG-R--VGQIIAQLLSERLIPFVALDVRSDRVAIG---RA----LDLPVYFGDAGSREVLHKVGA------ER 1073 (1207)
Q Consensus 1010 ~hVIIiG~G-r--vG~~Ia~~L~~~gi~vvVID~D~e~ve~~---r~----~g~~vi~GDatd~evL~~AgI------~~ 1073 (1207)
..++|.|.+ . +|+.+++.|.+.|..+++++++++..+.. .. ..+.++.+|.++++-++++=- .+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV 87 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 357788864 4 99999999999999999999886433322 21 157889999999987765411 24
Q ss_pred cCEEEEec
Q 000968 1074 ACAAAITL 1081 (1207)
Q Consensus 1074 A~~VViat 1081 (1207)
.|.+|-..
T Consensus 88 id~li~~A 95 (266)
T 3oig_A 88 IHGIAHCI 95 (266)
T ss_dssp CCEEEECC
T ss_pred eeEEEEcc
Confidence 56776654
No 452
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.33 E-value=3.4 Score=45.84 Aligned_cols=109 Identities=15% Similarity=-0.033 Sum_probs=66.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhh------CCCCEEEecCCCHHHHHhcCccccCEEEEecC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRA------LDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~------~g~~vi~GDatd~evL~~AgI~~A~~VViatd 1082 (1207)
.+++|+|.|..|+.++..|.+.|. .++++++++++.+.+.+ .+..+...+..+. .+ .+.++|.||-+|+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~-~l~~~DiVInaTp 203 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---ED-VIAAADGVVNATP 203 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HH-HHHHSSEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HH-HHhcCCEEEECCC
Confidence 478999999999999999999999 59999999998765522 1344544443232 21 2457899998886
Q ss_pred CcchhH-HHHHHHHHhCCCceEEEeeCChH---HHHHHHhCCCC
Q 000968 1083 TPGANY-RTVWALSKYFPNVKTFVRAHDID---HGLNLEKAGAT 1122 (1207)
Q Consensus 1083 dd~~Ni-~i~l~aR~l~P~i~IIaRa~d~~---~~~~L~~aGAd 1122 (1207)
-..... ..-.....+.|+..++=-++++. .....++.|+.
T Consensus 204 ~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~ 247 (283)
T 3jyo_A 204 MGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKAARALGCE 247 (283)
T ss_dssp TTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHHHHHHHHTCC
T ss_pred CCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHHHHHHHCcCe
Confidence 421100 00001112334433444455553 44555677874
No 453
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.32 E-value=2.1 Score=45.84 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=48.8
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC------ccccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag------I~~A~~VVia 1080 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+.... ..+.++.+|.+|++.++++= ..+.|.+|-.
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 88 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNC 88 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4666665 678999999999999999999999877654432 25778889999988766542 1256777754
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 89 A 89 (257)
T 3tpc_A 89 A 89 (257)
T ss_dssp C
T ss_pred C
Confidence 3
No 454
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=76.29 E-value=2.5 Score=47.90 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=54.7
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchhHH
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~Ni~ 1089 (1207)
..+-|+|+|.+|+.+++.|...|.+++++|++++.. ... ...+ ..+.+.+. .++|.|+++++....+..
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~----~~~l~ell----~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYY----VDSLDDLY----KQADVISLHVPDVPANVH 215 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCB----CSCHHHHH----HHCSEEEECSCCCGGGTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCee----cCCHHHHH----hhCCEEEEcCCCcHHHHH
Confidence 358899999999999999999999999999987654 221 1211 11332222 478999999987643322
Q ss_pred H--HHHHHHhCCCceEE
Q 000968 1090 T--VWALSKYFPNVKTF 1104 (1207)
Q Consensus 1090 i--~l~aR~l~P~i~II 1104 (1207)
+ ......+.|+..+|
T Consensus 216 li~~~~l~~mk~ga~lI 232 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIV 232 (333)
T ss_dssp CBSHHHHHHSCTTEEEE
T ss_pred HHhHHHHhhCCCCcEEE
Confidence 1 12344555664443
No 455
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=76.21 E-value=7.1 Score=44.14 Aligned_cols=108 Identities=10% Similarity=0.041 Sum_probs=67.1
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCe-EeecCChHHHHhhh-hCCC---CEEEecCCCHHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPF-VALDVRSDRVAIGR-ALDL---PVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~v-vVID~D~e~ve~~r-~~g~---~vi~GDatd~evL~~AgI~~A~~VViatdd 1083 (1207)
-++.|+|+|.+|+..++.|... +..+ .+.|.++++.+... ..|+ ...+.| -.++|.. .+.|+|++++++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~--~~~ll~~---~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGS--YESLLED---PEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESS--HHHHHHC---TTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCC--HHHHhcC---CCCCEEEEcCCh
Confidence 3688999999999999999874 4454 47899998876553 4453 234432 2334432 367999999987
Q ss_pred cchhHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee
Q 000968 1084 PGANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV 1125 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI 1125 (1207)
... ...+..+-+. ..++++. +.+.++...+ ++.|....+
T Consensus 82 ~~h-~~~~~~al~a--Gk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~ 127 (362)
T 1ydw_A 82 SLH-VEWAIKAAEK--GKHILLEKPVAMNVTEFDKIVDACEANGVQIMD 127 (362)
T ss_dssp GGH-HHHHHHHHTT--TCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEE
T ss_pred HHH-HHHHHHHHHC--CCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 643 3344333333 3467765 3455555444 445765543
No 456
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=76.21 E-value=2.8 Score=45.40 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=29.1
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeEeecCC
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVR 1041 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D 1041 (1207)
++.|+|.|.+|..++..|.+.|++++.+|..
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 6889999999999999999999999999884
No 457
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=76.10 E-value=2.2 Score=47.43 Aligned_cols=102 Identities=8% Similarity=-0.029 Sum_probs=66.3
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch-h
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-N 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~-N 1087 (1207)
.+++|+|.|..|+.++..|.+.|. +++++++++++.+.+... +..+ .-+-|.+ + ++|.||-+|+-... +
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-~~~~-----~~~~l~~--l-~~DivInaTp~Gm~~~ 193 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-FKVI-----SYDELSN--L-KGDVIINCTPKGMYPK 193 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-SEEE-----EHHHHTT--C-CCSEEEECSSTTSTTS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-cCcc-----cHHHHHh--c-cCCEEEECCccCccCC
Confidence 479999999999999999999998 899999999998776542 2222 1233443 5 89999998854210 0
Q ss_pred ---HHHHHHHHHhCCCceEEEeeCCh---HHHHHHHhCCCC
Q 000968 1088 ---YRTVWALSKYFPNVKTFVRAHDI---DHGLNLEKAGAT 1122 (1207)
Q Consensus 1088 ---i~i~l~aR~l~P~i~IIaRa~d~---~~~~~L~~aGAd 1122 (1207)
..+ ....+.|..-++=-++++ ......++.|+.
T Consensus 194 ~~~~pi--~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~ 232 (282)
T 3fbt_A 194 EGESPV--DKEVVAKFSSAVDLIYNPVETLFLKYARESGVK 232 (282)
T ss_dssp TTCCSS--CHHHHTTCSEEEESCCSSSSCHHHHHHHHTTCE
T ss_pred CccCCC--CHHHcCCCCEEEEEeeCCCCCHHHHHHHHCcCe
Confidence 001 111234444344445555 345566778975
No 458
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=76.08 E-value=3.2 Score=46.69 Aligned_cols=92 Identities=8% Similarity=0.079 Sum_probs=60.9
Q ss_pred ccccccCCCchHHHHHHHHHh--cCCC-eEeecCChHH-H-HhhhhCCCCEEEecCCC-HHHHHhcCccccCEEEEecCC
Q 000968 1010 DHIILCGFGRVGQIIAQLLSE--RLIP-FVALDVRSDR-V-AIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDT 1083 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~--~gi~-vvVID~D~e~-v-e~~r~~g~~vi~GDatd-~evL~~AgI~~A~~VViatdd 1083 (1207)
-++.|+|.|.+|+.+++.|.+ .+.. +.+.|.|+++ . +..+..|...++ .+ ++++...+..+.|+|+.+++.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~---~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc---CCHHHHHhccCCCCCcEEEECCCh
Confidence 368899999999999999955 2333 4567888876 3 444566765433 23 344555455789999999984
Q ss_pred cchhHHHHHHHHHhCCCceEEE
Q 000968 1084 PGANYRTVWALSKYFPNVKTFV 1105 (1207)
Q Consensus 1084 d~~Ni~i~l~aR~l~P~i~IIa 1105 (1207)
......+..+.+..+..+++.
T Consensus 82 -~~h~~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 82 -SAHVQNEALLRQAKPGIRLID 102 (312)
T ss_dssp -HHHHHHHHHHHHHCTTCEEEE
T ss_pred -HHHHHHHHHHHHhCCCCEEEE
Confidence 455566666655533445665
No 459
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=76.07 E-value=1.7 Score=46.57 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=52.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcCc-----cccCEEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA-----ERACAAA 1078 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~AgI-----~~A~~VV 1078 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+.. +.. .+.++.+|.+|++-++++-- .+.|.+|
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv 88 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTI 88 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEE
Confidence 4667765 5699999999999999999999998865543 222 35778899999987765421 2456666
Q ss_pred Eec
Q 000968 1079 ITL 1081 (1207)
Q Consensus 1079 iat 1081 (1207)
-..
T Consensus 89 ~nA 91 (252)
T 3h7a_A 89 FNV 91 (252)
T ss_dssp ECC
T ss_pred ECC
Confidence 544
No 460
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=76.00 E-value=2.9 Score=31.51 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=23.5
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000968 286 NCETELRRLQSKKEELQKEVDRLNEVA 312 (1207)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~~ 312 (1207)
..|+..+.|-.+|.+|+.||.||.++.
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457788899999999999999999864
No 461
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.94 E-value=2.7 Score=46.40 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=54.0
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcCc------cccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVGA------ERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~AgI------~~A~~V 1077 (1207)
.++|.|. |-+|+.+++.|.+.|..|++++++++..+... .. .+.++.+|.+|++.++++-- .+.|.+
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l 112 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVV 112 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4666665 56999999999999999999999988765442 22 45678899999988765421 256777
Q ss_pred EEecC
Q 000968 1078 AITLD 1082 (1207)
Q Consensus 1078 Viatd 1082 (1207)
|-...
T Consensus 113 vnnAg 117 (301)
T 3tjr_A 113 FSNAG 117 (301)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76543
No 462
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=75.90 E-value=3.5 Score=46.68 Aligned_cols=73 Identities=10% Similarity=0.050 Sum_probs=57.1
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd 1084 (1207)
+.++|.|.|.+|...++.++..|..+++++.++++.+.++ +.|...++ |..+.+.+++.. ..+|.++-++..+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~-~g~D~vid~~g~~ 255 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IGSDQAKMSELA-DSLDYVIDTVPVH 255 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEE-ETTCHHHHHHST-TTEEEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceee-ccccHHHHHHhc-CCCCEEEECCCCh
Confidence 4688999999999999999999999999999999988776 77764433 344556665553 4688888888754
No 463
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.88 E-value=2.4 Score=45.48 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=52.1
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcCc------cccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVGA------ERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~AgI------~~A~~V 1077 (1207)
.++|.|. +-+|+.+++.|.+.|..+++++++++..+... .. ...++.+|.+|++-++++-- .+.|.+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l 93 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVL 93 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4666664 66999999999999999999999988765442 22 45678899999987654311 256777
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 94 v~nA 97 (256)
T 3gaf_A 94 VNNA 97 (256)
T ss_dssp EECC
T ss_pred EECC
Confidence 6654
No 464
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=75.87 E-value=2.5 Score=44.73 Aligned_cols=72 Identities=8% Similarity=-0.046 Sum_probs=53.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh----hC--CCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r----~~--g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.|. |.+|+.+++.|.+.|..+++++++++..+... .. .+.++.+|.+|++.++++- ..+.|.+
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDIL 86 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5667765 67899999999999999999999988765442 22 4567889999998776542 1246777
Q ss_pred EEecC
Q 000968 1078 AITLD 1082 (1207)
Q Consensus 1078 Viatd 1082 (1207)
|-...
T Consensus 87 i~~Ag 91 (247)
T 3lyl_A 87 VNNAG 91 (247)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76543
No 465
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=75.83 E-value=3.3 Score=46.59 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=57.5
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEe--cCCC-HHHHHhcCccccCEEEEecCCc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFG--DAGS-REVLHKVGAERACAAAITLDTP 1084 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~G--Datd-~evL~~AgI~~A~~VViatddd 1084 (1207)
+.++|.|.|.+|...++.++..|. .|+++|.++++.+.+++.|...++- +..- ..+.+..+-..+|.++-++..+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~ 246 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDV 246 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCCh
Confidence 468899999999999999999998 8999999999999998888765542 1111 2333444445689988888775
No 466
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=75.83 E-value=2.8 Score=46.16 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=52.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh--CCCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA--LDLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~--~g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +. ..+.++.+|.+|++.++++= ..+.|.+
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 115 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDIL 115 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCCCEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 466666 56799999999999999999999998766543 22 24678899999998776541 1247777
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 116 vnnA 119 (291)
T 3cxt_A 116 VNNA 119 (291)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 467
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=75.82 E-value=4.3 Score=42.52 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=53.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcC--c-cccCEEEEec
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG--A-ERACAAAITL 1081 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~Ag--I-~~A~~VViat 1081 (1207)
.++|.| .|.+|+.+++.|.+.|..+++++++++..+...+ ..+.++.+|.++++.++++- + +..|.+|-..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 456666 4679999999999999999999999988776643 36789999999998876542 1 1226766544
No 468
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=75.78 E-value=3.6 Score=44.72 Aligned_cols=71 Identities=11% Similarity=0.017 Sum_probs=52.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
.++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +.. ...++.+|.++++.++++- ..+.|.+
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL 103 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 466665 56799999999999999999999998765433 222 3567889999998776541 1257887
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 104 v~~A 107 (277)
T 2rhc_B 104 VNNA 107 (277)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 469
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=75.70 E-value=1.2 Score=48.71 Aligned_cols=65 Identities=12% Similarity=0.040 Sum_probs=40.3
Q ss_pred cccccCCCchHHHHHHHHHhcCCCeE-eecCChHHHHhhhh-CCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1011 HIILCGFGRVGQIIAQLLSERLIPFV-ALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~~gi~vv-VID~D~e~ve~~r~-~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
++.|+|.|.+|..+++.|... ++++ +.|+++++.+.+.+ .+. ...|..+ -+.++|.|+++++++.
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~--~~~~~~~-------~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG--KAATLEK-------HPELNGVVFVIVPDRY 70 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC--CCCSSCC-------CCC---CEEECSCTTT
T ss_pred eEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC--ccCCHHH-------HHhcCCEEEEeCChHH
Confidence 578999999999999999887 8884 89999998877653 343 2212111 1345677777776653
No 470
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=75.69 E-value=3.3 Score=44.19 Aligned_cols=72 Identities=14% Similarity=-0.067 Sum_probs=51.3
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecC-ChHHHHhh----hhC--CCCEEEecCCCHHHHHhcCc------cccC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDV-RSDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA------ERAC 1075 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~-D~e~ve~~----r~~--g~~vi~GDatd~evL~~AgI------~~A~ 1075 (1207)
..++|.| .|.+|+.+++.|.+.|..++++++ +++..+.. +.. .+.++.+|.+|++.++++=- ...|
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567776 468999999999999999999998 76655432 222 35678899999988765421 2566
Q ss_pred EEEEec
Q 000968 1076 AAAITL 1081 (1207)
Q Consensus 1076 ~VViat 1081 (1207)
.+|-..
T Consensus 102 ~vi~~A 107 (274)
T 1ja9_A 102 FVMSNS 107 (274)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 666543
No 471
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=75.67 E-value=1.6 Score=47.78 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=51.0
Q ss_pred ccccC-CCchHHHHHHHHHhc--CCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCc-cccCEEEEecC
Q 000968 1012 IILCG-FGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1207)
Q Consensus 1012 VIIiG-~GrvG~~Ia~~L~~~--gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI-~~A~~VViatd 1082 (1207)
++|.| .|.+|+.+++.|.+. |..|+++++++... .+..++.||.+|++.+.++=- ...|.||-+..
T Consensus 2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 71 (317)
T 3ajr_A 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG 71 (317)
T ss_dssp EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence 66777 599999999999988 88999998765432 157899999999988876521 16788887654
No 472
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=75.60 E-value=2.8 Score=46.31 Aligned_cols=75 Identities=9% Similarity=-0.005 Sum_probs=53.4
Q ss_pred cccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh---CCCCEEEecCCCHHHHHhcC------c
Q 000968 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA---LDLPVYFGDAGSREVLHKVG------A 1071 (1207)
Q Consensus 1007 ~lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~---~g~~vi~GDatd~evL~~Ag------I 1071 (1207)
++++ .++|.|. |-+|+.+++.|.+.|..|++++++++..+.. +. ..+.++.+|.+|++.++++= .
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3444 4666665 5699999999999999999999998765443 22 24567889999998765431 1
Q ss_pred cccCEEEEec
Q 000968 1072 ERACAAAITL 1081 (1207)
Q Consensus 1072 ~~A~~VViat 1081 (1207)
.+.|.+|-..
T Consensus 118 g~iD~lvnnA 127 (293)
T 3rih_A 118 GALDVVCANA 127 (293)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 2457776654
No 473
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=75.59 E-value=1.8 Score=48.15 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=51.9
Q ss_pred ccccCC-CchHHHHHHHHHhc-CCCeEeecCCh--HHHHhhh----hCCCCEEEecCCCHHHHHhcCc-cccCEEEEecC
Q 000968 1012 IILCGF-GRVGQIIAQLLSER-LIPFVALDVRS--DRVAIGR----ALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1207)
Q Consensus 1012 VIIiG~-GrvG~~Ia~~L~~~-gi~vvVID~D~--e~ve~~r----~~g~~vi~GDatd~evL~~AgI-~~A~~VViatd 1082 (1207)
++|.|. |.+|+.+++.|.+. |+.|+++++++ ...+.+. ..++.++.||.+|++.+.++=- .+.|.||-+..
T Consensus 3 vlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 82 (361)
T 1kew_A 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAA 82 (361)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCC
Confidence 677875 99999999999988 79999998764 1222221 2356789999999998876521 16788887654
No 474
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=75.57 E-value=1.4 Score=43.70 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=63.0
Q ss_pred ccccccCC----CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc
Q 000968 1010 DHIILCGF----GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1207)
Q Consensus 1010 ~hVIIiG~----GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~ 1085 (1207)
..+.|+|. |.+|..+++.|.+.|+++..++.+.+.+ .|.+++ .+.. ++ .+.+|.+++++++ +
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~-~s~~------el-~~~vDlvii~vp~-~ 80 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCY-RSVR------EL-PKDVDVIVFVVPP-K 80 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECB-SSGG------GS-CTTCCEEEECSCH-H
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeec-CCHH------Hh-CCCCCEEEEEeCH-H
Confidence 46899999 9999999999999999766555443221 243322 1111 11 1368999999984 4
Q ss_pred hhHHHHHHHHHhCCCceEEEee--CChHHHHHHHhCCCCeeecCC
Q 000968 1086 ANYRTVWALSKYFPNVKTFVRA--HDIDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1086 ~Ni~i~l~aR~l~P~i~IIaRa--~d~~~~~~L~~aGAd~VI~p~ 1128 (1207)
.-..++..+.+..+.. ++.-. ..++-.+..++.|+. ++-|+
T Consensus 81 ~v~~v~~~~~~~g~~~-i~~~~~~~~~~l~~~a~~~Gi~-~igpn 123 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKK-LWFQPGAESEEIRRFLEKAGVE-YSFGR 123 (138)
T ss_dssp HHHHHHHHHHHTTCCE-EEECTTSCCHHHHHHHHHHTCE-EECSC
T ss_pred HHHHHHHHHHHcCCCE-EEEcCccHHHHHHHHHHHCCCE-EEcCC
Confidence 5555555555555542 33333 245566667777866 44444
No 475
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=75.48 E-value=8.2 Score=36.23 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=59.6
Q ss_pred CCeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHH--hCCCceEEE
Q 000968 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKTFV 1105 (1207)
Q Consensus 1033 i~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~--l~P~i~IIa 1105 (1207)
..+.++|.|+...+.+ +..|+.+..- .+-.+.++...-...+.|++-..-+. .-...+..+|+ .+|++++|+
T Consensus 7 ~~iLivdd~~~~~~~l~~~l~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 85 (140)
T 3grc_A 7 PRILICEDDPDIARLLNLMLEKGGFDSDMV-HSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV 85 (140)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCEEEEE-CSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHHCCCeEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence 4566666666544332 3345554322 22334555554466788887665443 34677778888 778999999
Q ss_pred eeCChHHHH---HHHhCCCCeeecCCc
Q 000968 1106 RAHDIDHGL---NLEKAGATAVVPETL 1129 (1207)
Q Consensus 1106 Ra~d~~~~~---~L~~aGAd~VI~p~~ 1129 (1207)
-+...+... ...++|++.++..-+
T Consensus 86 ~s~~~~~~~~~~~~~~~g~~~~l~kP~ 112 (140)
T 3grc_A 86 VSANAREGELEFNSQPLAVSTWLEKPI 112 (140)
T ss_dssp ECTTHHHHHHHHCCTTTCCCEEECSSC
T ss_pred EecCCChHHHHHHhhhcCCCEEEeCCC
Confidence 888765443 456789998885543
No 476
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=75.48 E-value=1.7 Score=49.03 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=53.3
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHH-----HHhh-------hhCCCCEEEecCCCHHHHHhcCcc-ccC
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDR-----VAIG-------RALDLPVYFGDAGSREVLHKVGAE-RAC 1075 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~-----ve~~-------r~~g~~vi~GDatd~evL~~AgI~-~A~ 1075 (1207)
.+++|.| .|.+|+.+++.|.+.|.+|++++++++. .+.+ ...++.++.||.+|++.+.++=-. +.|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 4588888 5899999999999999999999987543 2222 123577889999999887665211 468
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.||-+..
T Consensus 105 ~vih~A~ 111 (375)
T 1t2a_A 105 EIYNLGA 111 (375)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 8887654
No 477
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=75.45 E-value=1.6 Score=47.80 Aligned_cols=70 Identities=17% Similarity=0.146 Sum_probs=49.7
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecC-ChHH---HHhhhh-----CCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDV-RSDR---VAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~-D~e~---ve~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
+++|.| .|-+|+.+++.|.+.|+.|+++++ +++. ...... .++.++.||.+|++.++++ ++.+|.||-+
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~ 81 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAA-IEGCVGIFHT 81 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHH-HTTCSEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHH-HcCCCEEEEc
Confidence 477777 589999999999999999998887 6532 111111 1356788999999888765 4567887765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 82 A 82 (322)
T 2p4h_X 82 A 82 (322)
T ss_dssp C
T ss_pred C
Confidence 4
No 478
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=75.43 E-value=2.4 Score=45.96 Aligned_cols=71 Identities=14% Similarity=0.051 Sum_probs=53.4
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhh---hCCCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR---ALDLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r---~~g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
.++|.|. +-+|+.+++.|.+.|..|++++++++..+... ..+..++.+|.+|++.++++=- .+.|.+|-.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 92 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNN 92 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4666665 67999999999999999999999987765443 2357788999999987765421 256777664
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 93 A 93 (271)
T 3tzq_B 93 A 93 (271)
T ss_dssp C
T ss_pred C
Confidence 4
No 479
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=75.30 E-value=2.7 Score=45.91 Aligned_cols=76 Identities=18% Similarity=0.080 Sum_probs=55.3
Q ss_pred cccc-cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccC
Q 000968 1007 DLQD-HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERAC 1075 (1207)
Q Consensus 1007 ~lk~-hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~ 1075 (1207)
++++ .++|.| .+-+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++.++++=- .+.|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3444 456666 4679999999999999999999999887765532 245678899999987765421 2567
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.+|-...
T Consensus 104 ~lv~nAg 110 (277)
T 4dqx_A 104 VLVNNAG 110 (277)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776543
No 480
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=75.29 E-value=5.6 Score=43.52 Aligned_cols=111 Identities=7% Similarity=-0.103 Sum_probs=64.0
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC-CC--CEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DL--PVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~-g~--~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.+++|+|.|.+|+.++..|.+.|.+++++++++++.+.+.+. +. .+...|. +.+.-.++|.||.+++....
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTYDLVINATSAGLS 193 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCCSEEEECCCC---
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCCCEEEECCCCCCC
Confidence 469999999999999999999999999999999887665421 11 2222221 11100489999999987543
Q ss_pred hHHHHHHHHHhCCCceEEEeeCCh----HHHHHHHhCCCCeeec
Q 000968 1087 NYRTVWALSKYFPNVKTFVRAHDI----DHGLNLEKAGATAVVP 1126 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaRa~d~----~~~~~L~~aGAd~VI~ 1126 (1207)
.-..-.......|...++=-.+.+ ......++.|+..+++
T Consensus 194 ~~~~~i~~~~l~~~~~v~D~~y~p~~~t~ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 194 GGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSD 237 (272)
T ss_dssp ----CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEEC
T ss_pred CCCCCCCHHHcCCCCEEEEeeCCCCcCCHHHHHHHHcCCCEeeC
Confidence 100000000011222333333333 2355567889874554
No 481
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=75.29 E-value=6.4 Score=35.57 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=59.8
Q ss_pred CeEeecCChHHHHhh----hhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEeeC
Q 000968 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1207)
Q Consensus 1034 ~vvVID~D~e~ve~~----r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaRa~ 1108 (1207)
.+.++|.|+...+.+ ...|+.+..- .+-.+.++...-.+.+.+++-..-+. .....+..+|+.+|++++++.+.
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~~v~~~-~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGYEIDTA-ENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 466777776654333 3456655432 23344555544456788877665443 44677888888889999988877
Q ss_pred ChHHHHHHHhCCCCeeecCC
Q 000968 1109 DIDHGLNLEKAGATAVVPET 1128 (1207)
Q Consensus 1109 d~~~~~~L~~aGAd~VI~p~ 1128 (1207)
..+......+.|++..+...
T Consensus 82 ~~~~~~~~~~~g~~~~l~Kp 101 (116)
T 3a10_A 82 YSHYRSDMSSWAADEYVVKS 101 (116)
T ss_dssp CGGGGGCGGGGGSSEEEECC
T ss_pred CcchHHHHHhccccceEECC
Confidence 66544666778998887543
No 482
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=75.25 E-value=2.7 Score=44.93 Aligned_cols=72 Identities=11% Similarity=0.044 Sum_probs=52.1
Q ss_pred ccccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcC------ccccCE
Q 000968 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1207)
Q Consensus 1010 ~hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~Ag------I~~A~~ 1076 (1207)
..++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +.. .+.++.+|.++++.++++- ..+.|.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 94 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI 94 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3466666 56799999999999999999999998765433 222 3566789999998765531 125677
Q ss_pred EEEec
Q 000968 1077 AAITL 1081 (1207)
Q Consensus 1077 VViat 1081 (1207)
+|-..
T Consensus 95 lv~~A 99 (260)
T 2zat_A 95 LVSNA 99 (260)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77544
No 483
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=75.24 E-value=2.7 Score=45.16 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=51.9
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcC------ccccCEE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~Ag------I~~A~~V 1077 (1207)
+++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +.. ...++.+|.++++.++++= ..+.|.+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 88 (262)
T 1zem_A 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL 88 (262)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 466666 56799999999999999999999998766543 222 3567889999998765431 1256777
Q ss_pred EEec
Q 000968 1078 AITL 1081 (1207)
Q Consensus 1078 Viat 1081 (1207)
|-..
T Consensus 89 v~nA 92 (262)
T 1zem_A 89 FNNA 92 (262)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 484
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=75.24 E-value=3 Score=47.08 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=53.2
Q ss_pred cccccC-CCchHHHHHHHHH-hcCCCeEeecCChHH---------HHhhh-----------hCC---CCEEEecCCCHHH
Q 000968 1011 HIILCG-FGRVGQIIAQLLS-ERLIPFVALDVRSDR---------VAIGR-----------ALD---LPVYFGDAGSREV 1065 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~-~~gi~vvVID~D~e~---------ve~~r-----------~~g---~~vi~GDatd~ev 1065 (1207)
+++|.| .|.+|+.+++.|. +.|+.|+++++++.. .+.+. ..+ +.++.||.++++.
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 83 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence 477887 5999999999999 999999999886543 22221 114 7889999999998
Q ss_pred HHhcCc--cccCEEEEecC
Q 000968 1066 LHKVGA--ERACAAAITLD 1082 (1207)
Q Consensus 1066 L~~AgI--~~A~~VViatd 1082 (1207)
+.++=- .+.|.||-+..
T Consensus 84 ~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp HHHHHHHSCCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 876521 23888887654
No 485
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=75.10 E-value=3.9 Score=46.13 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=52.6
Q ss_pred ccccccCCCchHHHHHHHHHhcCC-CeEeecCC---hHHHHhhhh-----CCCCEEEecCCCHHHHHhcCccccCEEEEe
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVR---SDRVAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D---~e~ve~~r~-----~g~~vi~GDatd~evL~~AgI~~A~~VVia 1080 (1207)
.+++|+|.|..|+.++..|.+.|. .+++++++ +++.+.+.+ .+..+..-+..+.+.+. ..+.++|.||-+
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~-~~l~~~DiIINa 227 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFT-EALASADILTNG 227 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH-HHHHHCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhH-hhccCceEEEEC
Confidence 478999999999999999999998 79999999 666655432 24444444555532222 225678999988
Q ss_pred cCCc
Q 000968 1081 LDTP 1084 (1207)
Q Consensus 1081 tddd 1084 (1207)
|+-.
T Consensus 228 Tp~G 231 (312)
T 3t4e_A 228 TKVG 231 (312)
T ss_dssp SSTT
T ss_pred CcCC
Confidence 8753
No 486
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=75.09 E-value=2.6 Score=44.98 Aligned_cols=72 Identities=11% Similarity=0.019 Sum_probs=53.2
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcCc-------cccCE
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA-------ERACA 1076 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~AgI-------~~A~~ 1076 (1207)
+++|.| .|.+|+.+++.|.+.|..|++++++++..+.. +.. .+.++.+|.++++.++++-- .+.|.
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 95 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDI 95 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcE
Confidence 466665 57899999999999999999999998766543 222 45678899999987765421 35677
Q ss_pred EEEecC
Q 000968 1077 AAITLD 1082 (1207)
Q Consensus 1077 VViatd 1082 (1207)
+|-...
T Consensus 96 li~~Ag 101 (266)
T 1xq1_A 96 LINNLG 101 (266)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 776543
No 487
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=75.05 E-value=1.8 Score=46.24 Aligned_cols=81 Identities=19% Similarity=0.274 Sum_probs=48.2
Q ss_pred ccccccCCCchHHHHHHH--HHhcCCC-eEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQL--LSERLIP-FVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~--L~~~gi~-vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
.+++|+|.|..|+.+++. ....+.. +-++|.||++.... -.|+++. + ..+ +.+.--+. +.+++++++...
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~-i~gv~V~-~-~~d---l~eli~~~-D~ViIAvPs~~~ 158 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTE-VGGVPVY-N-LDD---LEQHVKDE-SVAILTVPAVAA 158 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCE-ETTEEEE-E-GGG---HHHHCSSC-CEEEECSCHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhH-hcCCeee-c-hhh---HHHHHHhC-CEEEEecCchhH
Confidence 469999999999999994 4445655 55889999876532 2355655 3 333 33322223 999999988643
Q ss_pred hHHHHHHHHHhC
Q 000968 1087 NYRTVWALSKYF 1098 (1207)
Q Consensus 1087 Ni~i~l~aR~l~ 1098 (1207)
. .++..+.+.+
T Consensus 159 ~-ei~~~l~~aG 169 (215)
T 2vt3_A 159 Q-SITDRLVALG 169 (215)
T ss_dssp H-HHHHHHHHTT
T ss_pred H-HHHHHHHHcC
Confidence 2 3444444433
No 488
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=75.05 E-value=3.2 Score=46.36 Aligned_cols=124 Identities=13% Similarity=0.050 Sum_probs=78.2
Q ss_pred ccccccCCCchHHHHHHHHHhc-CCCeE-eecCChHHHHhhh-hCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcch
Q 000968 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~-gi~vv-VID~D~e~ve~~r-~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~ 1086 (1207)
-++-|+|.|.+|+..++.|... +..++ +.|.|+++.+... ..|.+-.+.|. .++|.. .+.|+|+++++++.
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~--~~ll~~---~~~D~V~i~tp~~~- 79 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKL--EDMLAD---ESIDVIYVATINQD- 79 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCH--HHHHTC---TTCCEEEECSCGGG-
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCH--HHHhcC---CCCCEEEECCCcHH-
Confidence 3688999999999999998875 44444 6699988876553 34665444332 333332 46899999998864
Q ss_pred hHHHHHHHHHhCCCceEEEe---eCChHHHHHH----HhCCCCeee--cCCcHHHHHHHHHHHH
Q 000968 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV--PETLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1087 Ni~i~l~aR~l~P~i~IIaR---a~d~~~~~~L----~~aGAd~VI--~p~~eaal~La~~iL~ 1141 (1207)
....+..+-+.+ .++++. +.+.++...+ ++.|.-..+ ...+..+.+-+..++.
T Consensus 80 h~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~ 141 (329)
T 3evn_A 80 HYKVAKAALLAG--KHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLA 141 (329)
T ss_dssp HHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC--CeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHh
Confidence 344444444444 457764 4465555554 556776555 3345666677777665
No 489
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=75.00 E-value=2.7 Score=45.28 Aligned_cols=71 Identities=8% Similarity=-0.089 Sum_probs=53.3
Q ss_pred cccccC-CCchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccCEEEEe
Q 000968 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1207)
Q Consensus 1011 hVIIiG-~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~~VVia 1080 (1207)
+++|.| .|.+|+.+++.|.+.|..|++++++++..+.... ....++.+|.+|++.++++=- .+.|.+|-.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~ 88 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN 88 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 466766 5679999999999999999999999887654421 236678899999988765411 256777765
Q ss_pred c
Q 000968 1081 L 1081 (1207)
Q Consensus 1081 t 1081 (1207)
.
T Consensus 89 A 89 (260)
T 1nff_A 89 A 89 (260)
T ss_dssp C
T ss_pred C
Confidence 4
No 490
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=74.97 E-value=2 Score=46.80 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=54.5
Q ss_pred cccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hhC--CCCEEEecCCCHHHHHhcCc------c
Q 000968 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA------E 1072 (1207)
Q Consensus 1007 ~lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~~--g~~vi~GDatd~evL~~AgI------~ 1072 (1207)
++++ .++|.|. +-+|+.+++.|.+.|..|++++++++..+.. +.. ...++.+|.+|++-++++-- .
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 3444 4566664 6799999999999999999999998876543 222 45667799999987765421 2
Q ss_pred ccCEEEEecC
Q 000968 1073 RACAAAITLD 1082 (1207)
Q Consensus 1073 ~A~~VViatd 1082 (1207)
+.|.+|-...
T Consensus 103 ~iD~lv~nAg 112 (271)
T 4ibo_A 103 DVDILVNNAG 112 (271)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5677776543
No 491
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=74.94 E-value=2.8 Score=45.41 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=55.8
Q ss_pred cccc-cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhh---CCCCEEEecCCCHHHHHhcCc------cccC
Q 000968 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERAC 1075 (1207)
Q Consensus 1007 ~lk~-hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~---~g~~vi~GDatd~evL~~AgI------~~A~ 1075 (1207)
++++ .++|.|. |-+|+.+++.|.+.|..+++++++++..+.... ..+.++.+|.+|++.++++-- .+.|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4444 4566664 679999999999999999999999888765532 346778899999987765421 2567
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.+|-...
T Consensus 104 ~lvnnAg 110 (266)
T 3grp_A 104 ILVNNAG 110 (266)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776543
No 492
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=74.89 E-value=6.8 Score=44.64 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=65.4
Q ss_pred cccccccCCCchHHHHHHHHHhcCC-CeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1009 k~hVIIiG~GrvG~~Ia~~L~~~gi-~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
+.||+|+|.|..|..+++.|...|+ .++++|.|.=....+.+. +++ ....+.+ ...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq---~~~---------~~~diG~-----------~Ka 92 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQ---FLI---------RTGSVGR-----------NRA 92 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGC---TTS---------CSSCTTS-----------BHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCC---Ccc---------ccccCcC-----------CHH
Confidence 4589999999999999999999998 789998875332222111 000 0011111 233
Q ss_pred HHHHHHHHHhCCCceEEEeeCChHH-HHHHHhCCCCeeecC-CcHHHHHHHHHHHH
Q 000968 1088 YRTVWALSKYFPNVKTFVRAHDIDH-GLNLEKAGATAVVPE-TLEPSLQLAAAVLA 1141 (1207)
Q Consensus 1088 i~i~l~aR~l~P~i~IIaRa~d~~~-~~~L~~aGAd~VI~p-~~eaal~La~~iL~ 1141 (1207)
..++..++++||.+++.+...+... ...+. .+.|.||.- ....++...+....
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~-~~~dvVv~~~d~~~~r~~ln~~~~ 147 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDIEKKPESFF-TQFDAVCLTCCSRDVIVKVDQICH 147 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCGGGCCHHHH-TTCSEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhHCCCeEEEEEecccCcchHHHh-cCCCEEEEcCCCHHHHHHHHHHHH
Confidence 4566778899999998887665422 12221 478888832 22333334444443
No 493
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=74.85 E-value=3.2 Score=31.48 Aligned_cols=27 Identities=30% Similarity=0.428 Sum_probs=23.1
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000968 286 NCETELRRLQSKKEELQKEVDRLNEVA 312 (1207)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~~ 312 (1207)
..|+..+.|-.+|.+|++||.||.++.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 457778888999999999999999864
No 494
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=74.82 E-value=3.8 Score=48.73 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=54.3
Q ss_pred ccccccCCCchHHH-HHHHHHhcCCCeEeecCChH-HHHhhhhCCCCEEEecCCCHHHHHhcCccccCEEEEecCCcchh
Q 000968 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVRSD-RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~-Ia~~L~~~gi~vvVID~D~e-~ve~~r~~g~~vi~GDatd~evL~~AgI~~A~~VViatddd~~N 1087 (1207)
.++.++|.|..|.. +++.|.+.|..|.+.|..+. ..+.++..|+.+..|.. ++. +..|++||+...-+..|
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~--~~~-----~~~a~~vv~s~~i~~~~ 92 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHR--PEN-----VRDASVVVVSSAISADN 92 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCC--GGG-----GTTCSEEEECTTCCTTC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCC--HHH-----cCCCCEEEECCCCCCCC
Confidence 47899999999998 99999999999999998643 44667788999887753 222 35688888765544444
No 495
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=74.78 E-value=1.2 Score=48.71 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=35.5
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhhhhCCCCEEEecCCCHHHHHhcCcc-ccCEEEEecC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE-RACAAAITLD 1082 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~g~~vi~GDatd~evL~~AgI~-~A~~VViatd 1082 (1207)
+++|.|. |.+|+.+++.|.+.|++|++++++++. .+ ++.||.++++.+.++=-. +.|.||-+..
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 4 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-
T ss_pred eEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 5788886 999999999999999999999976543 12 788999998766554211 4677776553
No 496
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=74.78 E-value=11 Score=44.25 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=87.9
Q ss_pred ccccccCCCchHHHHHHHHHhcCCCeE-eecCC----------hHHHHhhhhC-C----CCEEEecCCCHHHHHhcCccc
Q 000968 1010 DHIILCGFGRVGQIIAQLLSERLIPFV-ALDVR----------SDRVAIGRAL-D----LPVYFGDAGSREVLHKVGAER 1073 (1207)
Q Consensus 1010 ~hVIIiG~GrvG~~Ia~~L~~~gi~vv-VID~D----------~e~ve~~r~~-g----~~vi~GDatd~evL~~AgI~~ 1073 (1207)
..++|.|+|.+|+..++.|.+.|..++ +.|.+ .+.+...++. | ++ +.....+-+... .
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~---a~~~~~~~i~~~---~ 295 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLF---TDVITNEELLEK---D 295 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGC---SCCBCHHHHHHS---C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCC---cEEecCccceec---c
Confidence 358899999999999999999999875 77776 6666555433 2 11 223233333333 6
Q ss_pred cCEEEEecCCcchhHHHHHHHHHhCCCceEEEeeCC----hHHHHHHHhCCCCeeecCCcHH-HHHHHHHHH------HH
Q 000968 1074 ACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVPETLEP-SLQLAAAVL------AQ 1142 (1207)
Q Consensus 1074 A~~VViatddd~~Ni~i~l~aR~l~P~i~IIaRa~d----~~~~~~L~~aGAd~VI~p~~ea-al~La~~iL------~~ 1142 (1207)
+|.++=+.-....|... ++++ ++++|+...+ ++..+.|++.|+ ++-|.+.+ +-.++..-+ ..
T Consensus 296 ~DIliPcA~~n~I~~~~---a~~l--~ak~V~EgAN~p~t~eA~~iL~~rGI--~~~PD~~aNAGGV~vS~~E~~qn~~~ 368 (424)
T 3k92_A 296 CDILVPAAISNQITAKN---AHNI--QASIVVERANGPTTIDATKILNERGV--LLVPDILASAGGVTVSYFEWVQNNQG 368 (424)
T ss_dssp CSEEEECSCSSCBCTTT---GGGC--CCSEEECCSSSCBCHHHHHHHHHTTC--EEECHHHHTTHHHHHHHHHHHHHHHT
T ss_pred ccEEeecCcccccChhh---Hhhc--CceEEEcCCCCCCCHHHHHHHHHCCC--EEECchHhcCCCEEeehhHHHhcccc
Confidence 78877665444444332 3333 5788888764 678899999996 34444332 222222222 23
Q ss_pred cCCCHHHHHHHHHH-HHHhcHHHHHH
Q 000968 1143 AKLPASEIAATINE-FRTRHLSELTE 1167 (1207)
Q Consensus 1143 lg~~~~ei~~~i~~-~r~~~~~~L~~ 1167 (1207)
+..+.+++..-++. ++....+.++.
T Consensus 369 ~~w~~eeV~~~l~~~m~~~~~~v~~~ 394 (424)
T 3k92_A 369 YYWSEEEVAEKLRSVMVSSFETIYQT 394 (424)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577778777777 55554444443
No 497
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=74.74 E-value=4 Score=46.95 Aligned_cols=42 Identities=17% Similarity=0.253 Sum_probs=35.3
Q ss_pred cccccCCCchHHHHHHHHHh-cCCCeEeec---CChHHHHhh-hhCC
Q 000968 1011 HIILCGFGRVGQIIAQLLSE-RLIPFVALD---VRSDRVAIG-RALD 1052 (1207)
Q Consensus 1011 hVIIiG~GrvG~~Ia~~L~~-~gi~vvVID---~D~e~ve~~-r~~g 1052 (1207)
++.|+|.|.+|..++..|.. .|.+|+++| +++++++.. +..|
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g 50 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADE 50 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhcc
Confidence 57899999999999999987 599999999 888888773 4433
No 498
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=74.67 E-value=15 Score=35.12 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=60.2
Q ss_pred CCCeEeecCChHHHHhhh---hCCCCEEEecCCCHHHHHhcCccc-cCEEEEecCCcc-hhHHHHHHHHHhCCCceEEEe
Q 000968 1032 LIPFVALDVRSDRVAIGR---ALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1207)
Q Consensus 1032 gi~vvVID~D~e~ve~~r---~~g~~vi~GDatd~evL~~AgI~~-A~~VViatddd~-~Ni~i~l~aR~l~P~i~IIaR 1106 (1207)
...++++|.|+...+.++ ..|+.+..- .+-.+.+....-.+ .+.|++-..-+. .-+.++..+|+.+|++++|+.
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~~~~~v~~~-~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 82 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLSFDFEVTTC-ESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLML 82 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSEEEEE-SSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHhccCceEEEe-CCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEE
Confidence 345777777776544332 235555432 22334444443344 488888766543 346788889999999999887
Q ss_pred eCChH--HHHHHHhCC-CCeeecCCc
Q 000968 1107 AHDID--HGLNLEKAG-ATAVVPETL 1129 (1207)
Q Consensus 1107 a~d~~--~~~~L~~aG-Ad~VI~p~~ 1129 (1207)
+...+ ......+.| ++.++...+
T Consensus 83 s~~~~~~~~~~~~~~g~~~~~l~KP~ 108 (151)
T 3kcn_A 83 TGNQDLTTAMEAVNEGQVFRFLNKPC 108 (151)
T ss_dssp ECGGGHHHHHHHHHHTCCSEEEESSC
T ss_pred ECCCCHHHHHHHHHcCCeeEEEcCCC
Confidence 76544 456667788 877774443
No 499
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=74.65 E-value=2.7 Score=45.21 Aligned_cols=72 Identities=11% Similarity=0.003 Sum_probs=52.7
Q ss_pred cccccCC-CchHHHHHHHHHhcCCCeEeecCChHHHHhh----hh----CCCCEEEecCCCHHHHHhcC------ccccC
Q 000968 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA----LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1207)
Q Consensus 1011 hVIIiG~-GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~----r~----~g~~vi~GDatd~evL~~Ag------I~~A~ 1075 (1207)
.++|.|. |.+|+.+++.|.+.|..|++++++++..+.. .. .+..++.+|.+|++.++++= ..+.|
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 88 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD 88 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4667664 6799999999999999999999998765432 11 23567889999998776541 12467
Q ss_pred EEEEecC
Q 000968 1076 AAAITLD 1082 (1207)
Q Consensus 1076 ~VViatd 1082 (1207)
.+|-...
T Consensus 89 ~lv~~Ag 95 (267)
T 2gdz_A 89 ILVNNAG 95 (267)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776653
No 500
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=74.55 E-value=2.8 Score=44.68 Aligned_cols=68 Identities=10% Similarity=0.023 Sum_probs=0.0
Q ss_pred cccccccccccccc--CCCchHHHHHHHHHhcCCCeEeecCChHHHHhhhhC---CCCEEEecCCCHHHHHhc
Q 000968 1002 ESETDDLQDHIILC--GFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKV 1069 (1207)
Q Consensus 1002 e~~~~~lk~hVIIi--G~GrvG~~Ia~~L~~~gi~vvVID~D~e~ve~~r~~---g~~vi~GDatd~evL~~A 1069 (1207)
.+...+++++++++ |.+-+|+.+++.|.+.|..+++++++++..+..... ...++.+|.++++.++++
T Consensus 1 ~p~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (261)
T 3n74_A 1 GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAA 73 (261)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHH
T ss_pred CCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Done!