BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000969
(1206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1
Length = 1440
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQGRTA--QLSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L QL+NL+++ + L + LP L +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKGSGY 118
+ I + + ++ PI L +D++++ ++ D N S +G S+ Y
Sbjct: 61 VYCNRASIRI--QWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSE---Y 115
Query: 119 GFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVVN 178
GFA+K+ +GM + VN++ + + ++ AS + L + N NWQ +
Sbjct: 116 GFAEKVVEGMFIIVNSITIKIHSKAF------------HASFELWQLQGYSVNPNWQQSD 163
Query: 179 LKEARDFSLNKKFIYVFKKLEWETLSVD 206
L+ R + + FK++ W+TL ++
Sbjct: 164 LRLTRITDPCRGEVLTFKEITWQTLRIE 191
>sp|Q6NRZ1|UH1BL_XENLA UHRF1-binding protein 1-like OS=Xenopus laevis GN=uhrf1bp1l PE=2
SV=1
Length = 1415
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQGRTA--QLSNLDINGDALHASMGLPPALHVTT 58
M +I + + + K+ S D+ L QL+NL+++ + L + LP L +
Sbjct: 1 MAGLIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNMLDLPTWLAINK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKGSGY 118
K I +P + ++ PI L +D++ + + + +CN S T +G S+ Y
Sbjct: 61 VFCNKAAIRIP--WTKLKTHPISLSLDKVIMEMSTCEEPRSCNGPSPLVTASGQSE---Y 115
Query: 119 GFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVVN 178
GFA+K+ +G++L VN++ ++ R A AS + L + + N +WQ +
Sbjct: 116 GFAEKVVEGISLSVNSI--IIRIRAKAFN----------ASFELSQLRIYSVNPSWQHGD 163
Query: 179 LKEARDFSLNKKFIYVFKKLEWETLSVD 206
L+ R + + FK++ W+ + ++
Sbjct: 164 LRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|A2RSJ4|UH1BL_MOUSE UHRF1-binding protein 1-like OS=Mus musculus GN=Uhrf1bp1l PE=2 SV=2
Length = 1457
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQGRTAQ--LSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L + L NL+++ + L + LP L ++
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAISK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKG-SG 117
K I +P + ++ +PI L +D++ + + + A N P+P ++ G S
Sbjct: 61 VFCNKASIRIP--WTKLKTQPICLSLDKVIMEMSTCEEPRAPN----GPSPIATASGQSE 114
Query: 118 YGFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVV 177
YGFA+K+ +G+T+ VN++ V R GA+ AS + L + + N W+
Sbjct: 115 YGFAEKVVEGITVSVNSI----VIRIGAKAFN--------ASFELSQLRIYSVNAQWEHG 162
Query: 178 NLKEARDFSLNKKFIYVFKKLEWETLSVD 206
+L+ R + + FK++ W+ + ++
Sbjct: 163 DLRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2
Length = 1464
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQGRTAQ--LSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L + L NL+++ + L + LP L +
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKG-SG 117
K I +P + ++ PI L +D++ + + + + N P+P ++ G S
Sbjct: 61 VFCNKASIRIP--WTKLKTHPICLSLDKVIMEMSTCEEPRSPN----GPSPIATASGQSE 114
Query: 118 YGFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVV 177
YGFA+K+ +G+++ VN++ V R GA+ AS + L + + N +W+
Sbjct: 115 YGFAEKVVEGISVSVNSI----VIRIGAKAFN--------ASFELSQLRIYSVNAHWEHG 162
Query: 178 NLKEARDFSLNKKFIYVFKKLEWETLSVD 206
+L+ R + + FK++ W+ + ++
Sbjct: 163 DLRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|Q9FX64|HOP2_ARATH Homologous-pairing protein 2 homolog OS=Arabidopsis thaliana GN=HOP2
PE=1 SV=1
Length = 226
Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 1084 AAGVLRLLKLEKTIGQSAIDQLGNLGSGGFDKIFSP--HLSRRSSGQSIGQFSLENS--- 1138
AA L+ L+KT Q A+D L + G F + +++R+ QF + NS
Sbjct: 28 AADALQKFNLKKTAVQKALDSLADAGKITFKEYGKQKIYIARQD------QFEIPNSEEL 81
Query: 1139 -VTKSSHTSLESTLTSLEEAVSDSQAKCAALVTNLGSTEYSSDHLASINQLREKIESMQS 1197
K + L+ L ++ +SD +++ +L +NL E +LR++++ M+
Sbjct: 82 AQMKEDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEEIQEKDA----KLRKEVKEMEE 137
Query: 1198 LLTQLRSQI 1206
L +LR I
Sbjct: 138 KLVKLREGI 146
>sp|Q5EAC6|CDC37_BOVIN Hsp90 co-chaperone Cdc37 OS=Bos taurus GN=CDC37 PE=2 SV=1
Length = 380
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 932 EGAQEMEERCCLSSQEVGREERSWHTTFQSVRAKAKSIP 970
EG + ER +Q++ +EERSW + +R K KS+P
Sbjct: 77 EGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMP 115
>sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 OS=Homo sapiens GN=CDC37 PE=1 SV=1
Length = 378
Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 932 EGAQEMEERCCLSSQEVGREERSWHTTFQSVRAKAKSIP 970
EG + ER +Q++ +EERSW + +R K KS+P
Sbjct: 75 EGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMP 113
>sp|Q63692|CDC37_RAT Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus GN=Cdc37 PE=1 SV=2
Length = 379
Score = 35.0 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 923 ELKDWLFALEGAQEMEERCCLSSQEVGREERSWHTTFQSVRAKAKSIP 970
+LK+ A G Q ER +Q++ +EERSW + +R K K++P
Sbjct: 67 KLKELEVAEGGGQVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>sp|C5BPV5|PNP_TERTT Polyribonucleotide nucleotidyltransferase OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=pnp PE=3 SV=1
Length = 705
Score = 34.7 bits (78), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 859 ILGPDGGPGEGLSKGIEHLS-EGPLSKLFKASPLSVEDVGEGRNSLDGKDGLVHL 912
I G DG +G IE ++ E + +++K + + D G N L GKDGLVH+
Sbjct: 597 IYGDDGDSLQGAINRIEEITAEAEIGEVYKGKVVRIVDFGAFVNFLPGKDGLVHI 651
>sp|P71128|CYSM_CAMJE Cysteine synthase B OS=Campylobacter jejuni subsp. jejuni serotype
O:2 (strain NCTC 11168) GN=cysM PE=3 SV=2
Length = 299
Score = 34.3 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 672 KSAMKSGNESLGVKLMENAPNDTAVSLAV--KDLQLRFLE--PSSMNIEGMPLVQFVGED 727
K A+ S + ++E +T +SLA+ DL L+F+ P SM++E ++ G
Sbjct: 49 KDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGAR 108
Query: 728 MFIKVTHRTLGGAVAVSSTILWESVEVDCVDTEENLPHENG 768
+ + + + GAV ++ IL + V EN+ ++N
Sbjct: 109 LELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNA 149
>sp|A9IXE5|DAPB_BART1 4-hydroxy-tetrahydrodipicolinate reductase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=dapB PE=3 SV=1
Length = 270
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 639 YLSNTSVEQLFFVLDIYTYFGRVSEKIVRVGKNKSAMKSGNESLGVKLMENAPNDTAVSL 698
Y + ++L ++ + EKI K + +KSGN SLG+ L+ N A +L
Sbjct: 83 YADYAAQKKLVHIIGTTGFSKTEEEKIAEFAKYTTIVKSGNMSLGINLLANLVKKAAKAL 142
Query: 699 AVKDLQLRFLEPSSMN 714
D + E N
Sbjct: 143 EADDFDIEIYEMHHAN 158
>sp|Q89882|U95_HHV6U Uncharacterized protein U95 OS=Human herpesvirus 6A (strain
Uganda-1102) GN=U95 PE=3 SV=1
Length = 1121
Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1138 SVTKSSHTSLESTLTSLEEAVSDSQAKCAALVTNLGSTEYSSDHL 1182
S TK+ + ES LT L + SD++ +C VT +G YSS++
Sbjct: 712 SGTKNEYYDDESELTGLSDTDSDNEVQCCQEVTKVGPKTYSSENF 756
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,897,727
Number of Sequences: 539616
Number of extensions: 19372318
Number of successful extensions: 45861
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 45801
Number of HSP's gapped (non-prelim): 70
length of query: 1206
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1077
effective length of database: 121,958,995
effective search space: 131349837615
effective search space used: 131349837615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)