Query 000971
Match_columns 1206
No_of_seqs 845 out of 6330
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 12:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000971.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000971hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-216 2E-221 1971.3 76.5 1102 36-1204 12-1154(1391)
2 PLN03140 ABC transporter G fam 100.0 4E-194 9E-199 1899.9 114.7 1193 10-1204 10-1243(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-153 5E-158 1521.2 107.0 1060 93-1205 2-1129(1394)
4 KOG0061 Transporter, ABC super 100.0 2.3E-78 4.9E-83 743.9 56.2 567 114-757 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 5.2E-78 1.1E-82 749.9 56.5 551 162-756 35-612 (617)
6 PLN03211 ABC transporter G-25; 100.0 2.2E-77 4.9E-82 742.8 59.9 594 113-757 34-658 (659)
7 PLN03140 ABC transporter G fam 100.0 7.6E-76 1.6E-80 776.3 60.2 580 111-758 860-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 7E-74 1.5E-78 709.8 57.8 768 164-1066 365-1208(1228)
9 KOG0054 Multidrug resistance-a 100.0 2.2E-73 4.8E-78 722.5 50.5 763 165-1067 534-1358(1381)
10 KOG0065 Pleiotropic drug resis 100.0 2.2E-73 4.8E-78 702.7 30.9 543 162-757 801-1383(1391)
11 TIGR01257 rim_protein retinal- 100.0 1.4E-68 3.1E-73 706.0 73.7 216 828-1066 1937-2154(2272)
12 TIGR00956 3a01205 Pleiotropic 100.0 2.4E-69 5.1E-74 718.5 58.4 541 164-756 775-1389(1394)
13 PLN03130 ABC transporter C fam 100.0 5.8E-67 1.2E-71 702.1 65.2 211 827-1066 1236-1456(1622)
14 COG1123 ATPase components of v 100.0 1E-66 2.2E-71 608.4 50.5 474 165-1066 22-514 (539)
15 PLN03232 ABC transporter C fam 100.0 3.5E-67 7.6E-72 704.9 53.0 211 827-1066 1233-1453(1495)
16 PTZ00265 multidrug resistance 100.0 1.3E-64 2.8E-69 673.2 60.1 217 827-1066 1164-1447(1466)
17 TIGR00957 MRP_assoc_pro multi 100.0 8.6E-65 1.9E-69 682.7 57.1 211 827-1066 1283-1503(1522)
18 PRK10261 glutathione transport 100.0 9E-64 1.9E-68 623.0 53.6 487 165-1066 29-548 (623)
19 PRK13549 xylose transporter AT 100.0 2.7E-64 5.9E-69 616.2 47.9 460 165-1068 18-491 (506)
20 PRK10762 D-ribose transporter 100.0 4.7E-64 1E-68 613.4 47.9 450 165-1068 17-481 (501)
21 PRK09700 D-allose transporter 100.0 3.1E-64 6.7E-69 616.7 46.4 458 165-1066 18-493 (510)
22 PTZ00243 ABC transporter; Prov 100.0 2.1E-63 4.5E-68 667.1 57.4 211 827-1066 1307-1528(1560)
23 TIGR01271 CFTR_protein cystic 100.0 6.7E-63 1.4E-67 662.3 59.7 210 827-1066 1216-1435(1490)
24 PRK15134 microcin C ABC transp 100.0 2.1E-63 4.5E-68 611.6 49.0 464 165-1066 22-510 (529)
25 TIGR03269 met_CoM_red_A2 methy 100.0 3.4E-63 7.3E-68 608.9 50.0 445 165-1066 13-512 (520)
26 PRK15439 autoinducer 2 ABC tra 100.0 2.2E-63 4.8E-68 607.8 47.6 453 165-1067 24-488 (510)
27 TIGR02633 xylG D-xylose ABC tr 100.0 9.3E-63 2E-67 602.6 48.7 459 165-1066 14-487 (500)
28 PRK11288 araG L-arabinose tran 100.0 8.6E-63 1.9E-67 602.2 47.6 453 165-1070 17-484 (501)
29 KOG0061 Transporter, ABC super 100.0 1.1E-63 2.4E-68 614.0 30.7 359 825-1204 22-388 (613)
30 PRK10982 galactose/methyl gala 100.0 1.2E-61 2.6E-66 591.2 48.2 450 165-1067 11-476 (491)
31 PRK10938 putative molybdenum t 100.0 1.8E-60 3.9E-65 581.0 43.1 447 166-1064 17-485 (490)
32 COG4172 ABC-type uncharacteriz 100.0 8.7E-59 1.9E-63 507.9 45.1 470 163-1066 21-511 (534)
33 PRK11819 putative ABC transpor 100.0 8.4E-58 1.8E-62 563.9 53.9 201 828-1065 324-527 (556)
34 PRK15064 ABC transporter ATP-b 100.0 1.2E-57 2.5E-62 560.8 50.4 198 828-1066 319-520 (530)
35 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3E-57 6.6E-62 558.9 53.8 201 828-1065 322-525 (552)
36 PRK13409 putative ATPase RIL; 100.0 5.2E-56 1.1E-60 545.4 41.5 211 828-1080 340-554 (590)
37 PRK10636 putative ABC transpor 100.0 4.5E-55 9.7E-60 545.1 49.8 197 828-1066 312-512 (638)
38 PRK11147 ABC transporter ATPas 100.0 3.3E-54 7.1E-59 538.9 54.9 202 828-1066 319-523 (635)
39 TIGR00955 3a01204 The Eye Pigm 100.0 9E-57 1.9E-61 559.6 31.7 346 853-1205 37-392 (617)
40 PLN03211 ABC transporter G-25; 100.0 3.2E-56 7E-61 553.7 35.1 368 825-1204 36-437 (659)
41 COG1129 MglA ABC-type sugar tr 100.0 1.8E-53 3.9E-58 494.5 43.4 449 163-1063 19-482 (500)
42 PLN03073 ABC transporter F fam 100.0 1.2E-51 2.7E-56 514.9 49.7 200 828-1066 508-709 (718)
43 COG0488 Uup ATPase components 100.0 4.3E-51 9.4E-56 488.3 44.6 498 164-1065 15-519 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.2E-49 4.9E-54 449.4 39.7 457 164-1067 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 4.8E-45 1E-49 373.9 22.4 214 829-1066 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 5.6E-43 1.2E-47 358.7 19.7 222 163-435 13-238 (240)
47 COG1131 CcmA ABC-type multidru 100.0 1.7E-42 3.6E-47 391.8 25.2 224 828-1079 4-230 (293)
48 COG1135 AbcC ABC-type metal io 100.0 7.2E-43 1.6E-47 375.4 20.9 219 829-1067 2-227 (339)
49 COG1127 Ttg2A ABC-type transpo 100.0 2.1E-42 4.5E-47 359.9 22.6 231 828-1082 8-250 (263)
50 COG1116 TauB ABC-type nitrate/ 100.0 2.3E-42 5E-47 366.0 22.4 204 828-1057 3-207 (248)
51 KOG0927 Predicted transporter 100.0 7.3E-42 1.6E-46 388.5 27.6 201 828-1066 389-591 (614)
52 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.2E-42 1.1E-46 368.9 24.0 217 828-1068 4-224 (254)
53 COG1120 FepC ABC-type cobalami 100.0 4.8E-42 1E-46 371.3 21.9 218 828-1067 2-224 (258)
54 COG1136 SalX ABC-type antimicr 100.0 2.1E-41 4.5E-46 359.4 24.0 208 830-1058 3-219 (226)
55 COG1125 OpuBA ABC-type proline 100.0 5.4E-42 1.2E-46 357.4 19.1 213 829-1066 2-220 (309)
56 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-42 4.7E-47 348.7 15.2 201 854-1066 15-217 (245)
57 COG3638 ABC-type phosphate/pho 100.0 1.5E-41 3.3E-46 352.6 19.2 221 828-1069 3-235 (258)
58 COG2884 FtsE Predicted ATPase 100.0 5.8E-41 1.2E-45 335.9 18.5 213 829-1065 2-220 (223)
59 COG1135 AbcC ABC-type metal io 100.0 8.8E-41 1.9E-45 359.3 21.0 225 163-438 17-247 (339)
60 COG1118 CysA ABC-type sulfate/ 100.0 7.2E-41 1.6E-45 358.8 18.9 205 853-1067 14-223 (345)
61 COG3839 MalK ABC-type sugar tr 100.0 2E-40 4.2E-45 372.1 22.0 214 828-1066 3-218 (338)
62 COG1131 CcmA ABC-type multidru 100.0 3.8E-40 8.3E-45 372.6 24.1 212 164-418 17-230 (293)
63 COG3839 MalK ABC-type sugar tr 100.0 1.8E-40 3.9E-45 372.3 21.1 217 167-434 18-235 (338)
64 COG1117 PstB ABC-type phosphat 100.0 1.6E-40 3.4E-45 338.6 18.5 218 828-1066 7-232 (253)
65 COG3842 PotA ABC-type spermidi 100.0 2.1E-40 4.5E-45 373.8 20.3 216 828-1067 5-222 (352)
66 PRK13537 nodulation ABC transp 100.0 1.7E-39 3.7E-44 370.8 26.9 214 828-1066 7-222 (306)
67 COG1118 CysA ABC-type sulfate/ 100.0 3.7E-40 8.1E-45 353.3 19.9 223 163-434 13-239 (345)
68 COG1125 OpuBA ABC-type proline 100.0 5.4E-40 1.2E-44 342.5 20.2 210 164-414 13-225 (309)
69 COG3842 PotA ABC-type spermidi 100.0 3.9E-40 8.4E-45 371.6 20.6 223 164-436 17-240 (352)
70 COG1116 TauB ABC-type nitrate/ 100.0 1.3E-39 2.8E-44 345.0 20.2 192 165-401 16-207 (248)
71 COG1120 FepC ABC-type cobalami 100.0 5.3E-40 1.1E-44 355.4 17.5 211 164-413 14-227 (258)
72 COG1127 Ttg2A ABC-type transpo 100.0 1.6E-39 3.5E-44 338.4 20.3 211 163-414 19-235 (263)
73 TIGR02314 ABC_MetN D-methionin 100.0 6.3E-39 1.4E-43 368.9 26.4 217 829-1066 2-225 (343)
74 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.2E-39 1.6E-43 344.6 22.5 206 166-413 18-226 (254)
75 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-38 2.9E-43 351.5 25.3 214 829-1066 1-221 (235)
76 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-38 2.9E-43 369.3 25.6 216 828-1067 3-220 (356)
77 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-38 3.4E-43 368.3 26.1 214 828-1066 4-219 (353)
78 PRK13536 nodulation factor exp 100.0 2.6E-38 5.6E-43 364.7 26.6 214 828-1066 41-256 (340)
79 PRK11432 fbpC ferric transport 100.0 3E-38 6.5E-43 365.3 27.0 214 828-1066 6-221 (351)
80 COG1136 SalX ABC-type antimicr 100.0 1.6E-38 3.4E-43 337.4 22.3 196 164-403 17-220 (226)
81 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-38 6.5E-43 366.4 26.3 214 828-1066 5-223 (362)
82 cd03259 ABC_Carb_Solutes_like 100.0 3.6E-38 7.7E-43 342.9 23.8 210 830-1064 2-213 (213)
83 COG1117 PstB ABC-type phosphat 100.0 6.7E-39 1.5E-43 326.7 16.7 223 164-434 19-249 (253)
84 COG4555 NatA ABC-type Na+ tran 100.0 7.3E-39 1.6E-43 323.2 16.7 206 165-414 15-222 (245)
85 TIGR00960 3a0501s02 Type II (G 100.0 4E-38 8.7E-43 343.3 23.9 207 829-1057 2-214 (216)
86 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-38 5E-43 343.3 21.6 214 829-1066 4-223 (235)
87 COG3638 ABC-type phosphate/pho 100.0 2.2E-38 4.8E-43 329.0 20.0 217 163-414 15-237 (258)
88 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.7E-38 1.7E-42 341.9 25.3 215 830-1066 2-218 (220)
89 PRK10851 sulfate/thiosulfate t 100.0 7.2E-38 1.6E-42 362.8 26.2 216 829-1066 3-221 (353)
90 TIGR01188 drrA daunorubicin re 100.0 4.2E-38 9.1E-43 359.7 23.7 202 853-1066 5-208 (302)
91 PRK09452 potA putrescine/sperm 100.0 9.7E-38 2.1E-42 363.3 26.8 214 828-1066 14-229 (375)
92 COG3840 ThiQ ABC-type thiamine 100.0 2.1E-38 4.6E-43 314.5 17.8 196 859-1066 17-214 (231)
93 TIGR01288 nodI ATP-binding ABC 100.0 9.8E-38 2.1E-42 356.9 26.0 214 828-1066 4-219 (303)
94 cd03269 ABC_putative_ATPase Th 100.0 8.9E-38 1.9E-42 339.0 24.1 210 829-1064 1-210 (210)
95 TIGR02314 ABC_MetN D-methionin 100.0 1.7E-37 3.7E-42 357.1 27.6 206 165-413 18-229 (343)
96 COG1124 DppF ABC-type dipeptid 100.0 4.9E-38 1.1E-42 329.4 20.8 217 828-1067 3-227 (252)
97 cd03265 ABC_DrrA DrrA is the A 100.0 1.4E-37 3E-42 340.0 25.1 213 829-1066 1-216 (220)
98 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-37 2.6E-42 338.8 24.4 211 829-1064 1-213 (213)
99 PRK11153 metN DL-methionine tr 100.0 1.5E-37 3.3E-42 360.1 26.3 217 829-1066 2-225 (343)
100 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-37 3.3E-42 343.4 24.9 215 830-1066 2-227 (236)
101 PRK11607 potG putrescine trans 100.0 2.6E-37 5.7E-42 360.4 27.7 214 828-1066 19-234 (377)
102 TIGR01186 proV glycine betaine 100.0 1.2E-37 2.5E-42 360.2 24.3 202 853-1066 5-214 (363)
103 PRK11650 ugpC glycerol-3-phosp 100.0 1.4E-37 3E-42 360.9 25.0 206 165-413 17-223 (356)
104 cd03266 ABC_NatA_sodium_export 100.0 1.3E-37 2.8E-42 339.8 23.4 215 829-1064 2-218 (218)
105 PRK11000 maltose/maltodextrin 100.0 2E-37 4.3E-42 362.0 26.3 214 828-1066 3-218 (369)
106 cd03218 ABC_YhbG The ABC trans 100.0 2E-37 4.3E-42 341.6 24.6 213 829-1066 1-217 (232)
107 cd03296 ABC_CysA_sulfate_impor 100.0 2.9E-37 6.2E-42 341.7 25.9 217 828-1066 2-221 (239)
108 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-37 3.5E-42 363.2 25.2 218 828-1067 3-224 (402)
109 TIGR03522 GldA_ABC_ATP gliding 100.0 2.2E-37 4.7E-42 353.5 25.5 212 829-1066 3-216 (301)
110 COG1137 YhbG ABC-type (unclass 100.0 1.6E-38 3.5E-43 320.3 13.9 205 852-1066 15-223 (243)
111 PRK11432 fbpC ferric transport 100.0 2.1E-37 4.5E-42 358.3 24.9 206 165-413 19-225 (351)
112 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-37 3.9E-42 338.7 23.1 208 829-1057 1-216 (218)
113 cd03234 ABCG_White The White s 100.0 3.3E-37 7.2E-42 338.3 25.1 221 829-1064 4-226 (226)
114 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-37 4.5E-42 335.6 23.1 207 829-1064 1-208 (208)
115 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-37 4.9E-42 358.6 24.9 206 165-413 17-223 (353)
116 COG2274 SunT ABC-type bacterio 100.0 3.9E-36 8.4E-41 371.0 37.0 217 822-1066 465-691 (709)
117 cd03260 ABC_PstB_phosphate_tra 100.0 2.3E-37 5.1E-42 339.9 23.3 214 829-1066 1-224 (227)
118 cd03258 ABC_MetN_methionine_tr 100.0 2.8E-37 6.1E-42 340.6 23.8 217 829-1066 2-225 (233)
119 TIGR03258 PhnT 2-aminoethylpho 100.0 2.9E-37 6.3E-42 358.1 24.9 207 165-413 18-227 (362)
120 TIGR01186 proV glycine betaine 100.0 3.7E-37 7.9E-42 356.1 25.6 207 164-413 5-218 (363)
121 cd03256 ABC_PhnC_transporter A 100.0 2.7E-37 5.8E-42 342.7 23.3 216 830-1066 2-229 (241)
122 TIGR02673 FtsE cell division A 100.0 3.3E-37 7.1E-42 335.6 23.3 206 829-1057 2-213 (214)
123 PRK13637 cbiO cobalt transport 100.0 4.3E-37 9.4E-42 348.6 24.9 218 829-1066 3-229 (287)
124 PRK09493 glnQ glutamine ABC tr 100.0 6E-37 1.3E-41 339.5 25.4 214 829-1066 2-220 (240)
125 PRK09452 potA putrescine/sperm 100.0 4E-37 8.6E-42 358.2 25.0 206 165-413 27-233 (375)
126 cd03226 ABC_cobalt_CbiO_domain 100.0 2.4E-37 5.3E-42 334.2 21.1 192 854-1061 13-205 (205)
127 cd03263 ABC_subfamily_A The AB 100.0 4.5E-37 9.7E-42 336.0 23.4 214 829-1066 1-216 (220)
128 PRK11264 putative amino-acid A 100.0 8.2E-37 1.8E-41 340.6 25.7 214 829-1066 4-228 (250)
129 cd03292 ABC_FtsE_transporter F 100.0 4.7E-37 1E-41 334.4 23.2 205 830-1057 2-212 (214)
130 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.7E-37 1.2E-41 340.0 24.1 213 830-1066 2-220 (242)
131 PRK11248 tauB taurine transpor 100.0 9.9E-37 2.1E-41 340.0 25.9 212 829-1066 2-215 (255)
132 KOG0058 Peptide exporter, ABC 100.0 7.7E-38 1.7E-42 370.1 17.7 214 826-1066 463-686 (716)
133 PRK11629 lolD lipoprotein tran 100.0 1.3E-36 2.8E-41 335.2 26.4 217 828-1066 5-229 (233)
134 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.9E-37 1.3E-41 344.7 23.8 203 852-1066 35-245 (269)
135 PRK13647 cbiO cobalt transport 100.0 8.7E-37 1.9E-41 344.1 25.1 215 828-1066 4-222 (274)
136 cd03224 ABC_TM1139_LivF_branch 100.0 5.5E-37 1.2E-41 335.8 22.7 211 829-1066 1-216 (222)
137 COG4152 ABC-type uncharacteriz 100.0 1.6E-37 3.4E-42 322.0 17.1 212 829-1066 3-214 (300)
138 TIGR02315 ABC_phnC phosphonate 100.0 4.7E-37 1E-41 341.1 22.0 217 829-1066 2-230 (243)
139 PRK11831 putative ABC transpor 100.0 1.2E-36 2.7E-41 342.3 25.6 215 828-1066 7-228 (269)
140 PRK13634 cbiO cobalt transport 100.0 8.6E-37 1.9E-41 346.7 24.5 217 829-1066 3-230 (290)
141 PRK13537 nodulation ABC transp 100.0 8.4E-37 1.8E-41 348.7 24.4 206 165-414 20-227 (306)
142 KOG0058 Peptide exporter, ABC 100.0 2.9E-37 6.4E-42 365.2 21.0 210 163-414 479-691 (716)
143 PRK13651 cobalt transporter AT 100.0 1.2E-36 2.7E-41 346.6 25.2 218 829-1066 3-249 (305)
144 PRK13643 cbiO cobalt transport 100.0 1.5E-36 3.2E-41 344.5 25.5 217 829-1066 2-228 (288)
145 PRK10908 cell division protein 100.0 1.5E-36 3.2E-41 332.3 24.6 208 829-1060 2-215 (222)
146 cd03262 ABC_HisP_GlnQ_permease 100.0 9.8E-37 2.1E-41 331.7 23.0 205 830-1057 2-211 (213)
147 cd03264 ABC_drug_resistance_li 100.0 1E-36 2.3E-41 330.9 23.2 209 829-1064 1-211 (211)
148 TIGR01257 rim_protein retinal- 100.0 1.5E-34 3.3E-39 384.0 48.3 216 827-1066 927-1144(2272)
149 COG0411 LivG ABC-type branched 100.0 2.9E-37 6.2E-42 324.0 17.7 222 162-414 14-239 (250)
150 COG0411 LivG ABC-type branched 100.0 5.3E-37 1.1E-41 322.1 19.5 207 852-1067 15-235 (250)
151 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-36 3.1E-41 334.0 23.9 217 829-1064 2-228 (228)
152 PRK13631 cbiO cobalt transport 100.0 1.4E-36 3E-41 348.1 24.8 218 828-1066 21-260 (320)
153 PRK10619 histidine/lysine/argi 100.0 2.6E-36 5.7E-41 337.7 26.2 215 828-1066 5-236 (257)
154 COG4559 ABC-type hemin transpo 100.0 6.2E-37 1.4E-41 311.6 19.1 216 829-1067 2-226 (259)
155 PRK13636 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 343.2 25.0 215 828-1066 5-226 (283)
156 cd03235 ABC_Metallic_Cations A 100.0 8.1E-37 1.7E-41 332.3 21.3 199 854-1064 12-213 (213)
157 PRK10851 sulfate/thiosulfate t 100.0 1.5E-36 3.3E-41 351.7 24.9 210 165-413 15-225 (353)
158 PRK10895 lipopolysaccharide AB 100.0 1.6E-36 3.4E-41 336.4 23.9 214 829-1066 4-221 (241)
159 TIGR00972 3a0107s01c2 phosphat 100.0 2.6E-36 5.5E-41 335.9 25.6 214 829-1066 2-227 (247)
160 COG3840 ThiQ ABC-type thiamine 100.0 4.6E-37 9.9E-42 305.0 17.2 201 170-413 17-218 (231)
161 cd03261 ABC_Org_Solvent_Resist 100.0 2.1E-36 4.6E-41 334.1 24.5 206 165-412 13-224 (235)
162 PRK13646 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 343.7 24.4 217 829-1066 3-230 (286)
163 PRK11247 ssuB aliphatic sulfon 100.0 1.9E-36 4.2E-41 337.2 24.2 206 828-1066 12-218 (257)
164 PRK11607 potG putrescine trans 100.0 1.9E-36 4.2E-41 353.1 25.1 206 165-413 32-238 (377)
165 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-36 2.4E-41 330.8 21.5 193 854-1057 14-210 (211)
166 COG1124 DppF ABC-type dipeptid 100.0 1.3E-36 2.8E-41 318.8 21.0 206 165-414 20-231 (252)
167 PRK13650 cbiO cobalt transport 100.0 1.7E-36 3.8E-41 342.5 23.7 216 828-1066 4-224 (279)
168 TIGR01188 drrA daunorubicin re 100.0 1.8E-36 3.8E-41 346.4 23.8 206 165-414 6-213 (302)
169 COG2884 FtsE Predicted ATPase 100.0 1.2E-36 2.6E-41 304.9 19.0 199 165-407 15-219 (223)
170 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-36 8E-41 329.0 24.7 211 829-1061 2-220 (221)
171 COG0410 LivF ABC-type branched 100.0 1.8E-36 3.9E-41 315.7 21.0 207 164-414 15-226 (237)
172 TIGR03005 ectoine_ehuA ectoine 100.0 3.5E-36 7.5E-41 335.8 24.9 214 829-1066 1-231 (252)
173 PRK13644 cbiO cobalt transport 100.0 2.6E-36 5.7E-41 340.2 23.9 213 829-1066 2-219 (274)
174 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.4E-36 1.2E-40 331.0 26.0 212 829-1066 2-216 (236)
175 PRK11614 livF leucine/isoleuci 100.0 2.5E-36 5.3E-41 334.0 23.2 212 828-1066 5-221 (237)
176 PRK11000 maltose/maltodextrin 100.0 3E-36 6.6E-41 352.0 25.2 206 165-413 16-222 (369)
177 PRK11153 metN DL-methionine tr 100.0 5.6E-36 1.2E-40 347.0 27.2 206 165-413 18-229 (343)
178 COG4525 TauB ABC-type taurine 100.0 1.3E-36 2.8E-41 304.6 18.8 201 854-1067 18-220 (259)
179 PRK15079 oligopeptide ABC tran 100.0 4.2E-36 9.2E-41 345.4 26.0 229 828-1066 8-246 (331)
180 PRK13641 cbiO cobalt transport 100.0 3.7E-36 8E-41 341.2 25.1 219 828-1066 2-229 (287)
181 TIGR03740 galliderm_ABC gallid 100.0 4.9E-36 1.1E-40 328.4 25.2 208 830-1067 2-209 (223)
182 PRK11300 livG leucine/isoleuci 100.0 3.9E-36 8.5E-41 336.1 24.8 217 828-1066 5-238 (255)
183 TIGR01978 sufC FeS assembly AT 100.0 5E-36 1.1E-40 332.9 25.3 219 829-1066 1-229 (243)
184 COG1122 CbiO ABC-type cobalt t 100.0 1.6E-36 3.5E-41 328.9 20.7 207 165-414 17-228 (235)
185 PRK11124 artP arginine transpo 100.0 5.2E-36 1.1E-40 332.4 25.2 213 829-1066 3-225 (242)
186 PRK13652 cbiO cobalt transport 100.0 4.6E-36 9.9E-41 338.9 25.0 214 829-1066 4-222 (277)
187 PRK14267 phosphate ABC transpo 100.0 5.6E-36 1.2E-40 334.4 25.5 217 828-1066 4-232 (253)
188 PRK14247 phosphate ABC transpo 100.0 6.8E-36 1.5E-40 333.1 25.9 217 828-1066 3-229 (250)
189 PRK14268 phosphate ABC transpo 100.0 6.6E-36 1.4E-40 334.5 25.8 214 828-1066 12-237 (258)
190 PRK14273 phosphate ABC transpo 100.0 6.8E-36 1.5E-40 333.9 25.7 215 828-1066 7-233 (254)
191 PRK13548 hmuV hemin importer A 100.0 5.9E-36 1.3E-40 334.7 24.7 213 829-1066 3-225 (258)
192 COG0410 LivF ABC-type branched 100.0 3E-36 6.6E-41 314.0 20.8 212 829-1066 4-221 (237)
193 PRK13635 cbiO cobalt transport 100.0 5.1E-36 1.1E-40 338.5 24.3 215 828-1066 5-224 (279)
194 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.4E-36 9.5E-41 326.0 22.9 208 830-1064 2-211 (211)
195 TIGR03411 urea_trans_UrtD urea 100.0 8.4E-36 1.8E-40 330.8 25.2 215 829-1066 3-226 (242)
196 PRK10253 iron-enterobactin tra 100.0 8.1E-36 1.8E-40 335.0 24.5 218 828-1067 7-229 (265)
197 PRK09984 phosphonate/organopho 100.0 8.4E-36 1.8E-40 334.6 24.4 220 828-1067 4-238 (262)
198 PRK11231 fecE iron-dicitrate t 100.0 7.5E-36 1.6E-40 333.6 24.0 217 829-1067 3-223 (255)
199 PRK13536 nodulation factor exp 100.0 8.2E-36 1.8E-40 344.0 24.9 206 165-414 54-261 (340)
200 PRK14241 phosphate transporter 100.0 1.3E-35 2.7E-40 332.4 25.8 217 828-1066 4-237 (258)
201 PRK14242 phosphate transporter 100.0 1.4E-35 3.1E-40 331.1 26.1 220 827-1066 5-232 (253)
202 PRK13638 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 336.5 23.9 213 829-1066 2-220 (271)
203 PRK10575 iron-hydroxamate tran 100.0 9.2E-36 2E-40 334.6 24.7 217 828-1066 11-232 (265)
204 TIGR02769 nickel_nikE nickel i 100.0 1.2E-35 2.7E-40 333.5 25.5 223 829-1066 3-235 (265)
205 PRK14245 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 330.3 25.9 219 828-1066 3-229 (250)
206 cd03233 ABC_PDR_domain1 The pl 100.0 1.1E-35 2.3E-40 320.3 23.8 196 828-1064 3-202 (202)
207 PRK10744 pstB phosphate transp 100.0 1.4E-35 2.9E-40 332.4 25.6 218 825-1066 10-239 (260)
208 PRK10070 glycine betaine trans 100.0 6.9E-36 1.5E-40 349.3 23.9 202 853-1066 40-249 (400)
209 cd03259 ABC_Carb_Solutes_like 100.0 7.6E-36 1.6E-40 324.6 22.7 200 165-407 13-213 (213)
210 PRK10584 putative ABC transpor 100.0 1.6E-35 3.5E-40 325.5 25.5 213 828-1062 6-226 (228)
211 PRK13649 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 336.9 24.8 217 829-1066 3-229 (280)
212 cd03265 ABC_DrrA DrrA is the A 100.0 1.1E-35 2.4E-40 325.0 23.6 205 165-412 13-219 (220)
213 COG4181 Predicted ABC-type tra 100.0 3.7E-36 7.9E-41 295.3 17.6 197 852-1061 21-225 (228)
214 COG2274 SunT ABC-type bacterio 100.0 4.7E-36 1E-40 370.2 23.2 207 166-414 487-696 (709)
215 PRK13639 cbiO cobalt transport 100.0 1.3E-35 2.8E-40 334.9 24.9 214 829-1066 2-221 (275)
216 PRK11022 dppD dipeptide transp 100.0 2.2E-35 4.7E-40 339.5 27.1 221 828-1066 3-238 (326)
217 PRK11308 dppF dipeptide transp 100.0 2E-35 4.3E-40 339.7 26.6 225 828-1066 5-239 (327)
218 COG4559 ABC-type hemin transpo 100.0 5E-36 1.1E-40 305.0 19.0 207 165-413 14-229 (259)
219 cd03300 ABC_PotA_N PotA is an 100.0 1.7E-35 3.8E-40 325.9 24.9 213 829-1066 1-215 (232)
220 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-35 2.5E-40 332.3 23.8 217 829-1067 2-222 (256)
221 cd03232 ABC_PDR_domain2 The pl 100.0 1.2E-35 2.6E-40 317.3 22.8 190 828-1064 3-192 (192)
222 PRK13637 cbiO cobalt transport 100.0 1.8E-35 4E-40 335.3 25.4 218 165-425 20-248 (287)
223 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.8E-35 4E-40 332.6 25.1 208 163-413 35-249 (269)
224 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-35 2.5E-40 327.2 23.0 211 829-1067 1-217 (230)
225 TIGR03415 ABC_choXWV_ATP choli 100.0 1.2E-35 2.6E-40 344.8 24.0 204 852-1067 35-250 (382)
226 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-35 3.6E-40 321.8 23.6 209 830-1065 2-212 (213)
227 PRK14235 phosphate transporter 100.0 2.4E-35 5.3E-40 331.4 25.7 216 828-1066 19-246 (267)
228 PRK14237 phosphate transporter 100.0 3.4E-35 7.3E-40 330.2 26.9 224 823-1066 15-246 (267)
229 PRK13632 cbiO cobalt transport 100.0 2E-35 4.2E-40 332.9 25.0 215 828-1066 7-226 (271)
230 PRK13549 xylose transporter AT 100.0 1.3E-35 2.8E-40 363.5 25.5 221 828-1068 5-229 (506)
231 TIGR01184 ntrCD nitrate transp 100.0 9.3E-36 2E-40 327.4 21.6 198 857-1066 1-199 (230)
232 cd03296 ABC_CysA_sulfate_impor 100.0 2E-35 4.4E-40 326.9 24.4 209 165-412 15-224 (239)
233 PRK09473 oppD oligopeptide tra 100.0 2.9E-35 6.4E-40 338.7 26.4 224 828-1066 12-246 (330)
234 PRK13547 hmuV hemin importer A 100.0 1.8E-35 4E-40 332.1 23.9 219 829-1067 2-240 (272)
235 PRK13648 cbiO cobalt transport 100.0 2.3E-35 5E-40 332.1 24.9 216 828-1067 7-227 (269)
236 PRK13633 cobalt transporter AT 100.0 2E-35 4.2E-40 334.3 24.2 219 828-1066 4-228 (280)
237 PRK13640 cbiO cobalt transport 100.0 1.8E-35 4E-40 334.7 24.0 217 828-1066 5-227 (282)
238 TIGR01288 nodI ATP-binding ABC 100.0 1.9E-35 4.1E-40 338.0 24.3 206 165-414 17-224 (303)
239 cd03219 ABC_Mj1267_LivG_branch 100.0 2E-35 4.3E-40 326.6 23.6 214 165-412 13-230 (236)
240 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-35 5E-40 320.9 23.7 200 165-407 13-213 (213)
241 PRK14269 phosphate ABC transpo 100.0 2.6E-35 5.7E-40 327.4 24.6 219 829-1066 3-225 (246)
242 KOG0062 ATPase component of AB 100.0 2.7E-35 5.8E-40 333.4 24.8 205 825-1066 359-564 (582)
243 PRK15093 antimicrobial peptide 100.0 3.4E-35 7.4E-40 339.0 26.3 223 828-1066 3-243 (330)
244 TIGR00968 3a0106s01 sulfate AB 100.0 2.9E-35 6.2E-40 325.2 24.6 212 830-1066 2-215 (237)
245 PRK13645 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 335.7 24.0 219 828-1066 6-235 (289)
246 cd03258 ABC_MetN_methionine_tr 100.0 2.4E-35 5.2E-40 325.3 23.6 205 166-413 19-229 (233)
247 PRK14259 phosphate ABC transpo 100.0 3E-35 6.6E-40 330.8 24.7 215 827-1066 12-248 (269)
248 PRK14256 phosphate ABC transpo 100.0 4.9E-35 1.1E-39 326.6 26.1 220 828-1066 4-231 (252)
249 PRK10771 thiQ thiamine transpo 100.0 2.4E-35 5.1E-40 325.0 23.2 211 829-1066 2-214 (232)
250 PRK14250 phosphate ABC transpo 100.0 2.6E-35 5.6E-40 326.4 23.6 209 828-1066 3-216 (241)
251 COG4988 CydD ABC-type transpor 100.0 9.2E-36 2E-40 346.9 20.6 213 825-1066 317-538 (559)
252 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-35 6.9E-40 324.1 23.9 204 165-412 13-220 (232)
253 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-35 3.7E-40 338.4 22.2 229 110-414 343-574 (591)
254 cd03299 ABC_ModC_like Archeal 100.0 4E-35 8.7E-40 323.6 24.4 211 830-1066 2-214 (235)
255 cd03267 ABC_NatA_like Similar 100.0 3E-35 6.4E-40 324.7 23.4 201 852-1064 32-236 (236)
256 COG1137 YhbG ABC-type (unclass 100.0 2.1E-36 4.5E-41 305.1 12.7 210 163-414 15-228 (243)
257 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.6E-35 7.8E-40 320.9 23.6 200 165-409 17-218 (220)
258 PRK10070 glycine betaine trans 100.0 3.8E-35 8.3E-40 343.1 25.3 207 164-413 40-253 (400)
259 KOG0057 Mitochondrial Fe/S clu 100.0 9.5E-36 2.1E-40 340.6 19.5 211 826-1066 349-569 (591)
260 TIGR03522 GldA_ABC_ATP gliding 100.0 3.5E-35 7.6E-40 335.3 24.2 205 165-414 15-221 (301)
261 PRK14270 phosphate ABC transpo 100.0 5.8E-35 1.3E-39 325.7 25.4 215 828-1066 4-230 (251)
262 PRK14257 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 335.3 26.5 222 827-1066 79-308 (329)
263 cd03263 ABC_subfamily_A The AB 100.0 2.7E-35 6E-40 321.9 22.3 203 165-412 15-219 (220)
264 TIGR03608 L_ocin_972_ABC putat 100.0 2.7E-35 5.9E-40 318.6 22.0 189 854-1054 11-206 (206)
265 PRK14239 phosphate transporter 100.0 5.8E-35 1.2E-39 326.1 25.3 215 828-1066 5-231 (252)
266 cd03260 ABC_PstB_phosphate_tra 100.0 2.4E-35 5.2E-40 323.9 21.8 204 165-411 13-226 (227)
267 PRK13634 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 333.7 23.6 218 165-425 20-249 (290)
268 cd03297 ABC_ModC_molybdenum_tr 100.0 4.8E-35 1E-39 318.5 23.7 191 859-1064 16-214 (214)
269 PRK14244 phosphate ABC transpo 100.0 5.8E-35 1.3E-39 325.8 24.9 219 829-1066 6-232 (251)
270 PRK14240 phosphate transporter 100.0 7.5E-35 1.6E-39 324.7 25.7 215 828-1066 3-229 (250)
271 PRK15112 antimicrobial peptide 100.0 4.5E-35 9.7E-40 329.2 24.0 223 829-1066 5-234 (267)
272 PRK14274 phosphate ABC transpo 100.0 6.7E-35 1.4E-39 326.7 25.2 219 828-1066 12-238 (259)
273 PRK13643 cbiO cobalt transport 100.0 5.3E-35 1.1E-39 331.8 24.6 224 166-433 20-255 (288)
274 TIGR00960 3a0501s02 Type II (G 100.0 2.3E-35 5.1E-40 321.5 20.8 195 165-403 16-216 (216)
275 cd03224 ABC_TM1139_LivF_branch 100.0 4.4E-35 9.4E-40 320.8 23.0 203 165-413 13-220 (222)
276 TIGR02142 modC_ABC molybdenum 100.0 4.4E-35 9.6E-40 341.3 24.4 194 859-1066 15-216 (354)
277 PRK11144 modC molybdate transp 100.0 4.8E-35 1E-39 340.5 24.5 190 859-1066 16-213 (352)
278 PRK14260 phosphate ABC transpo 100.0 7.6E-35 1.7E-39 326.1 25.2 216 828-1066 7-238 (259)
279 PRK14262 phosphate ABC transpo 100.0 8.5E-35 1.8E-39 324.3 25.4 218 829-1066 4-229 (250)
280 cd03256 ABC_PhnC_transporter A 100.0 5.3E-35 1.1E-39 324.3 23.6 214 165-413 14-233 (241)
281 COG0444 DppD ABC-type dipeptid 100.0 8.3E-35 1.8E-39 318.8 24.6 224 829-1066 2-238 (316)
282 TIGR03415 ABC_choXWV_ATP choli 100.0 5.8E-35 1.3E-39 339.1 24.7 208 163-413 35-253 (382)
283 PRK13642 cbiO cobalt transport 100.0 6.7E-35 1.5E-39 329.4 24.6 216 828-1066 4-224 (277)
284 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.3E-35 1.4E-39 323.7 23.9 206 165-413 14-224 (242)
285 cd03266 ABC_NatA_sodium_export 100.0 7.7E-35 1.7E-39 317.9 24.1 198 166-407 19-218 (218)
286 cd03213 ABCG_EPDR ABCG transpo 100.0 7.3E-35 1.6E-39 311.7 23.4 190 828-1064 3-194 (194)
287 PRK14253 phosphate ABC transpo 100.0 9.1E-35 2E-39 323.9 25.1 219 828-1066 3-228 (249)
288 PRK10762 D-ribose transporter 100.0 6.1E-35 1.3E-39 357.1 25.8 218 829-1068 5-227 (501)
289 PRK14258 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 324.9 25.9 221 828-1066 7-240 (261)
290 PRK13647 cbiO cobalt transport 100.0 8.8E-35 1.9E-39 327.8 24.9 203 166-412 19-225 (274)
291 cd03269 ABC_putative_ATPase Th 100.0 4.3E-35 9.2E-40 318.0 21.5 198 165-407 13-210 (210)
292 PRK14236 phosphate transporter 100.0 1.4E-34 3E-39 326.1 26.5 220 827-1066 24-251 (272)
293 PRK09473 oppD oligopeptide tra 100.0 1.4E-34 3E-39 333.1 26.8 213 165-413 29-250 (330)
294 PRK10418 nikD nickel transport 100.0 1.1E-34 2.3E-39 324.0 25.1 214 827-1066 3-225 (254)
295 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.1E-35 8.9E-40 320.1 21.2 195 165-403 17-218 (218)
296 PRK11831 putative ABC transpor 100.0 9.9E-35 2.1E-39 326.8 24.8 207 165-413 20-232 (269)
297 PRK13650 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 328.7 24.4 216 165-424 20-242 (279)
298 cd03233 ABC_PDR_domain1 The pl 100.0 9.1E-35 2E-39 313.0 23.2 183 163-407 18-202 (202)
299 PRK11701 phnK phosphonate C-P 100.0 1.2E-34 2.7E-39 324.4 25.0 215 828-1066 6-236 (258)
300 PRK14272 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 322.3 26.0 216 828-1066 4-231 (252)
301 TIGR02982 heterocyst_DevA ABC 100.0 1E-34 2.3E-39 317.2 23.6 211 829-1060 2-219 (220)
302 PRK11629 lolD lipoprotein tran 100.0 1.1E-34 2.3E-39 319.9 23.9 201 165-409 22-229 (233)
303 PRK15079 oligopeptide ABC tran 100.0 1.1E-34 2.5E-39 333.6 24.9 209 164-413 33-250 (331)
304 COG4175 ProV ABC-type proline/ 100.0 1.5E-35 3.3E-40 317.5 16.3 202 854-1067 41-250 (386)
305 PRK14249 phosphate ABC transpo 100.0 1.9E-34 4.1E-39 321.7 25.8 219 828-1066 4-230 (251)
306 TIGR02315 ABC_phnC phosphonate 100.0 6.1E-35 1.3E-39 324.1 21.7 213 165-412 15-233 (243)
307 PRK09700 D-allose transporter 100.0 8.6E-35 1.9E-39 356.8 25.1 218 828-1067 5-230 (510)
308 PRK11174 cysteine/glutathione 100.0 2.6E-35 5.6E-40 368.1 20.9 210 827-1066 348-567 (588)
309 KOG0055 Multidrug/pheromone ex 100.0 1.6E-35 3.5E-40 368.8 18.8 215 825-1066 347-571 (1228)
310 PRK00635 excinuclease ABC subu 100.0 3.3E-33 7.2E-38 365.6 41.3 134 925-1066 759-901 (1809)
311 TIGR02770 nickel_nikD nickel i 100.0 7.5E-35 1.6E-39 320.5 22.0 201 856-1066 1-210 (230)
312 PRK14248 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 325.6 24.8 215 828-1066 21-247 (268)
313 PRK11174 cysteine/glutathione 100.0 7.9E-35 1.7E-39 363.8 25.2 207 165-414 363-572 (588)
314 COG4988 CydD ABC-type transpor 100.0 6.6E-35 1.4E-39 339.8 22.6 206 166-414 335-543 (559)
315 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-34 3.7E-39 319.0 24.7 205 165-413 14-220 (236)
316 PRK13543 cytochrome c biogenes 100.0 1.3E-34 2.9E-39 314.8 23.4 202 828-1056 11-212 (214)
317 PRK14263 phosphate ABC transpo 100.0 2.6E-34 5.5E-39 321.7 26.2 219 827-1066 7-240 (261)
318 PRK14275 phosphate ABC transpo 100.0 1.8E-34 3.9E-39 327.1 25.2 215 828-1066 39-265 (286)
319 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-34 2.3E-39 339.5 23.9 209 165-413 16-227 (402)
320 cd03231 ABC_CcmA_heme_exporter 100.0 9.6E-35 2.1E-39 312.8 21.5 195 830-1054 2-198 (201)
321 PRK13538 cytochrome c biogenes 100.0 1.1E-34 2.3E-39 313.2 21.9 199 829-1054 2-202 (204)
322 PRK14251 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 321.3 25.0 215 828-1066 4-230 (251)
323 PRK11022 dppD dipeptide transp 100.0 2.6E-34 5.7E-39 330.5 26.5 213 165-413 20-242 (326)
324 cd03268 ABC_BcrA_bacitracin_re 100.0 8.2E-35 1.8E-39 315.3 20.9 195 165-407 13-208 (208)
325 PRK14261 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 321.5 25.0 215 828-1066 6-232 (253)
326 PRK14271 phosphate ABC transpo 100.0 2.6E-34 5.5E-39 324.1 25.7 219 828-1066 21-246 (276)
327 PRK15056 manganese/iron transp 100.0 1.6E-34 3.4E-39 325.7 23.8 218 828-1067 6-226 (272)
328 PRK13631 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 331.5 23.9 217 165-426 39-280 (320)
329 TIGR02633 xylG D-xylose ABC tr 100.0 1.7E-34 3.7E-39 353.5 25.8 220 829-1068 2-227 (500)
330 PRK11264 putative amino-acid A 100.0 2.3E-34 4.9E-39 320.9 24.4 205 165-413 16-232 (250)
331 PRK14255 phosphate ABC transpo 100.0 4E-34 8.7E-39 319.3 26.4 215 828-1066 5-231 (252)
332 cd03234 ABCG_White The White s 100.0 1.6E-34 3.5E-39 317.0 22.7 204 164-407 19-226 (226)
333 PRK09493 glnQ glutamine ABC tr 100.0 2.3E-34 5E-39 318.8 24.0 205 165-413 14-224 (240)
334 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.2E-34 4.7E-39 315.2 23.5 192 852-1064 33-224 (224)
335 cd03226 ABC_cobalt_CbiO_domain 100.0 8.7E-35 1.9E-39 314.3 20.1 192 165-404 13-205 (205)
336 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.6E-33 1.4E-37 353.5 40.7 210 827-1066 476-695 (710)
337 PRK13651 cobalt transporter AT 100.0 1.4E-34 3.1E-39 329.6 22.8 205 165-413 20-253 (305)
338 cd03252 ABCC_Hemolysin The ABC 100.0 4.7E-35 1E-39 323.8 18.2 211 829-1066 1-220 (237)
339 PRK15439 autoinducer 2 ABC tra 100.0 1.9E-34 4.2E-39 352.9 25.4 211 828-1067 11-225 (510)
340 PRK13635 cbiO cobalt transport 100.0 2.3E-34 5.1E-39 325.0 24.1 216 165-424 20-242 (279)
341 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.8E-35 1.5E-39 370.1 22.0 209 827-1066 450-668 (686)
342 PRK10419 nikE nickel transport 100.0 3.5E-34 7.5E-39 322.0 25.2 224 829-1067 4-237 (268)
343 PRK14254 phosphate ABC transpo 100.0 5.8E-34 1.2E-38 322.6 27.2 213 828-1066 39-264 (285)
344 PRK13646 cbiO cobalt transport 100.0 2E-34 4.3E-39 326.9 23.2 205 165-413 20-234 (286)
345 COG4175 ProV ABC-type proline/ 100.0 6.7E-35 1.4E-39 312.7 18.1 223 163-436 39-268 (386)
346 COG0444 DppD ABC-type dipeptid 100.0 3.1E-34 6.8E-39 314.3 23.8 231 164-437 17-258 (316)
347 PRK11288 araG L-arabinose tran 100.0 2.3E-34 5E-39 352.0 25.4 216 828-1065 4-223 (501)
348 cd03264 ABC_drug_resistance_li 100.0 1.5E-34 3.3E-39 313.9 21.1 197 165-407 13-211 (211)
349 PRK14265 phosphate ABC transpo 100.0 4E-34 8.7E-39 322.4 25.3 215 827-1066 19-253 (274)
350 CHL00131 ycf16 sulfate ABC tra 100.0 5.5E-34 1.2E-38 318.2 26.0 220 828-1066 7-236 (252)
351 cd03267 ABC_NatA_like Similar 100.0 4E-34 8.7E-39 315.7 24.6 202 163-407 32-236 (236)
352 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.4E-34 2.9E-39 324.4 21.1 210 828-1066 2-220 (275)
353 PRK13632 cbiO cobalt transport 100.0 5.1E-34 1.1E-38 321.4 25.7 205 165-413 22-230 (271)
354 PRK14238 phosphate transporter 100.0 3.6E-34 7.8E-39 322.5 24.3 215 828-1066 24-250 (271)
355 PRK10247 putative ABC transpor 100.0 1.9E-34 4.1E-39 316.1 21.5 209 828-1064 7-220 (225)
356 PRK00349 uvrA excinuclease ABC 100.0 5.6E-33 1.2E-37 351.4 37.7 122 929-1066 792-922 (943)
357 PRK10895 lipopolysaccharide AB 100.0 3.3E-34 7.1E-39 317.8 23.3 206 165-413 16-225 (241)
358 PRK13636 cbiO cobalt transport 100.0 3.4E-34 7.3E-39 324.5 23.8 207 165-414 19-231 (283)
359 PRK11144 modC molybdate transp 100.0 2.4E-34 5.3E-39 334.5 23.1 195 170-413 16-217 (352)
360 TIGR02323 CP_lyasePhnK phospho 100.0 5.5E-34 1.2E-38 318.4 24.9 215 828-1066 3-233 (253)
361 PRK11308 dppF dipeptide transp 100.0 5E-34 1.1E-38 328.1 25.1 207 165-413 28-243 (327)
362 TIGR03410 urea_trans_UrtE urea 100.0 3.2E-34 7E-39 315.6 22.6 202 165-412 13-219 (230)
363 PRK11248 tauB taurine transpor 100.0 4.1E-34 8.8E-39 318.9 23.7 201 165-410 14-216 (255)
364 PRK14243 phosphate transporter 100.0 4.8E-34 1E-38 320.3 24.3 218 828-1066 10-243 (264)
365 cd03292 ABC_FtsE_transporter F 100.0 2.6E-34 5.7E-39 312.8 21.5 195 165-403 14-214 (214)
366 cd03230 ABC_DR_subfamily_A Thi 100.0 2.8E-34 6.1E-39 301.7 20.9 168 830-1057 2-171 (173)
367 COG1132 MdlB ABC-type multidru 100.0 7.6E-35 1.7E-39 362.0 19.5 211 827-1066 327-547 (567)
368 cd03257 ABC_NikE_OppD_transpor 100.0 4.5E-34 9.8E-39 314.1 23.3 201 166-407 19-228 (228)
369 PRK13641 cbiO cobalt transport 100.0 3.3E-34 7.1E-39 325.3 22.9 205 165-413 20-233 (287)
370 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-34 8E-39 313.3 22.4 196 165-404 18-220 (221)
371 PRK10982 galactose/methyl gala 100.0 3.1E-34 6.6E-39 350.3 24.2 206 854-1068 11-220 (491)
372 TIGR03375 type_I_sec_LssB type 100.0 1.5E-32 3.2E-37 349.1 40.6 212 827-1066 462-683 (694)
373 PRK14246 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 316.8 25.6 216 828-1066 10-236 (257)
374 PRK11247 ssuB aliphatic sulfon 100.0 3.1E-34 6.8E-39 319.4 22.0 194 166-410 26-219 (257)
375 TIGR02673 FtsE cell division A 100.0 3.6E-34 7.8E-39 311.7 21.8 194 165-402 15-214 (214)
376 PRK13548 hmuV hemin importer A 100.0 6.1E-34 1.3E-38 318.4 24.1 206 165-413 15-229 (258)
377 PRK13539 cytochrome c biogenes 100.0 2.9E-34 6.3E-39 310.5 20.8 197 829-1055 3-199 (207)
378 PRK10790 putative multidrug tr 100.0 1.9E-34 4.1E-39 360.4 22.0 210 827-1066 339-558 (592)
379 PRK14266 phosphate ABC transpo 100.0 7.6E-34 1.6E-38 316.7 24.4 219 828-1066 3-229 (250)
380 PRK11614 livF leucine/isoleuci 100.0 4.7E-34 1E-38 315.8 22.4 203 165-413 18-225 (237)
381 PRK09580 sufC cysteine desulfu 100.0 9.9E-34 2.2E-38 315.4 25.2 219 829-1066 2-230 (248)
382 TIGR00972 3a0107s01c2 phosphat 100.0 7.3E-34 1.6E-38 316.2 24.1 206 166-413 15-231 (247)
383 cd03245 ABCC_bacteriocin_expor 100.0 2.3E-34 5E-39 314.6 19.7 210 828-1064 2-220 (220)
384 TIGR02142 modC_ABC molybdenum 100.0 6.8E-34 1.5E-38 331.3 24.8 199 170-413 15-220 (354)
385 TIGR01184 ntrCD nitrate transp 100.0 4.5E-34 9.7E-39 314.1 21.9 201 168-411 1-201 (230)
386 TIGR01166 cbiO cobalt transpor 100.0 3.1E-34 6.8E-39 306.2 20.1 178 854-1041 5-188 (190)
387 PRK03695 vitamin B12-transport 100.0 5.3E-34 1.2E-38 317.0 22.8 197 856-1066 11-217 (248)
388 TIGR03411 urea_trans_UrtD urea 100.0 8E-34 1.7E-38 315.0 23.8 211 165-412 15-229 (242)
389 TIGR02770 nickel_nikD nickel i 100.0 5.8E-34 1.3E-38 313.4 22.5 204 167-413 1-214 (230)
390 PRK13644 cbiO cobalt transport 100.0 5.7E-34 1.2E-38 321.2 22.9 204 165-413 15-223 (274)
391 cd03251 ABCC_MsbA MsbA is an e 100.0 1.5E-34 3.3E-39 319.1 17.9 209 830-1066 2-220 (234)
392 TIGR02769 nickel_nikE nickel i 100.0 8.6E-34 1.9E-38 318.6 24.3 207 164-413 23-239 (265)
393 PRK14273 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 314.7 26.3 206 166-413 21-237 (254)
394 PRK11160 cysteine/glutathione 100.0 3.2E-34 7E-39 355.9 22.8 212 827-1066 337-557 (574)
395 PRK11300 livG leucine/isoleuci 100.0 8.2E-34 1.8E-38 317.4 23.9 221 165-413 18-242 (255)
396 PRK11176 lipid transporter ATP 100.0 3E-34 6.4E-39 358.4 22.6 213 827-1066 340-562 (582)
397 TIGR03005 ectoine_ehuA ectoine 100.0 9.6E-34 2.1E-38 316.1 24.3 206 165-413 13-235 (252)
398 PRK14252 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 316.1 26.6 217 826-1066 14-244 (265)
399 PRK13652 cbiO cobalt transport 100.0 9.1E-34 2E-38 320.2 24.0 205 166-413 18-226 (277)
400 PRK14268 phosphate ABC transpo 100.0 1E-33 2.2E-38 316.9 24.1 205 165-412 25-240 (258)
401 PRK13633 cobalt transporter AT 100.0 1E-33 2.2E-38 320.3 24.4 205 165-413 23-232 (280)
402 PRK15093 antimicrobial peptide 100.0 1.5E-33 3.2E-38 325.3 26.2 217 165-413 20-247 (330)
403 PRK13648 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 318.4 24.4 204 166-413 23-230 (269)
404 TIGR01189 ccmA heme ABC export 100.0 5.7E-34 1.2E-38 306.2 20.9 194 830-1053 2-197 (198)
405 PRK10908 cell division protein 100.0 8E-34 1.7E-38 310.7 22.5 196 165-404 15-216 (222)
406 cd03225 ABC_cobalt_CbiO_domain 100.0 6.3E-34 1.4E-38 309.1 21.4 194 165-402 14-211 (211)
407 cd03299 ABC_ModC_like Archeal 100.0 1.4E-33 3.1E-38 311.3 24.5 204 167-413 14-218 (235)
408 COG4525 TauB ABC-type taurine 100.0 6.6E-34 1.4E-38 285.2 19.6 205 165-414 18-224 (259)
409 PRK13639 cbiO cobalt transport 100.0 1.6E-33 3.5E-38 317.8 25.4 204 166-413 16-225 (275)
410 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.2E-34 4.7E-39 318.7 17.9 211 830-1066 2-221 (238)
411 PRK13649 cbiO cobalt transport 100.0 1.5E-33 3.2E-38 319.4 25.2 205 165-413 20-233 (280)
412 TIGR02324 CP_lyasePhnL phospho 100.0 1.2E-33 2.5E-38 309.9 23.4 210 829-1055 2-223 (224)
413 cd03300 ABC_PotA_N PotA is an 100.0 1.7E-33 3.6E-38 310.2 24.7 206 165-413 13-219 (232)
414 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.1E-34 1.8E-38 308.2 21.9 195 170-407 16-211 (211)
415 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-34 5.6E-39 316.2 18.1 211 828-1066 2-221 (229)
416 PRK14250 phosphate ABC transpo 100.0 1E-33 2.2E-38 313.7 22.6 200 166-413 17-220 (241)
417 PRK14247 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 314.2 24.2 213 165-413 16-233 (250)
418 cd03229 ABC_Class3 This class 100.0 5.6E-34 1.2E-38 300.8 19.5 171 829-1057 1-177 (178)
419 TIGR03740 galliderm_ABC gallid 100.0 1.3E-33 2.7E-38 309.4 22.9 197 165-410 13-209 (223)
420 PRK13638 cbiO cobalt transport 100.0 1.6E-33 3.5E-38 317.4 24.4 205 165-413 14-224 (271)
421 TIGR01846 type_I_sec_HlyB type 100.0 1.9E-32 4.2E-37 347.8 37.2 212 827-1066 454-675 (694)
422 PRK10619 histidine/lysine/argi 100.0 1.4E-33 3E-38 315.7 23.6 205 165-413 18-240 (257)
423 PRK13546 teichoic acids export 100.0 4.2E-33 9.1E-38 311.4 27.2 194 852-1067 35-228 (264)
424 COG1129 MglA ABC-type sugar tr 100.0 1.6E-33 3.4E-38 328.2 24.6 228 828-1077 8-242 (500)
425 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.1E-34 1.1E-38 362.1 22.5 205 165-414 466-673 (686)
426 TIGR01193 bacteriocin_ABC ABC- 100.0 2.6E-34 5.7E-39 365.9 19.9 211 827-1066 472-692 (708)
427 PRK10584 putative ABC transpor 100.0 1.6E-33 3.4E-38 309.7 23.4 198 165-406 23-227 (228)
428 PRK13640 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 318.6 24.2 208 165-413 20-231 (282)
429 COG4604 CeuD ABC-type enteroch 100.0 6.1E-35 1.3E-39 293.4 10.7 206 852-1067 12-221 (252)
430 TIGR01978 sufC FeS assembly AT 100.0 1.6E-33 3.4E-38 312.9 23.1 213 165-413 13-233 (243)
431 PRK14264 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 320.2 25.6 221 828-1066 45-284 (305)
432 PRK11124 artP arginine transpo 100.0 1.2E-33 2.5E-38 313.6 22.0 204 165-412 15-228 (242)
433 KOG0066 eIF2-interacting prote 100.0 8.9E-33 1.9E-37 303.6 28.4 202 825-1066 583-786 (807)
434 TIGR03269 met_CoM_red_A2 methy 100.0 1.5E-33 3.4E-38 346.5 25.3 215 829-1066 1-253 (520)
435 PRK09544 znuC high-affinity zi 100.0 1.3E-33 2.8E-38 313.8 22.3 198 828-1066 4-204 (251)
436 PRK10253 iron-enterobactin tra 100.0 1.4E-33 3E-38 316.9 22.5 209 165-413 20-232 (265)
437 PRK10771 thiQ thiamine transpo 100.0 1.9E-33 4.2E-38 309.8 23.2 201 170-413 17-218 (232)
438 PRK14257 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 322.7 24.4 211 165-413 95-312 (329)
439 PRK10575 iron-hydroxamate tran 100.0 1.6E-33 3.5E-38 316.4 22.7 210 165-413 24-236 (265)
440 cd03235 ABC_Metallic_Cations A 100.0 1E-33 2.2E-38 308.0 20.4 200 165-407 12-213 (213)
441 COG1245 Predicted ATPase, RNas 100.0 2E-32 4.3E-37 305.0 30.9 173 857-1055 357-530 (591)
442 PRK13642 cbiO cobalt transport 100.0 5.2E-33 1.1E-37 314.0 26.9 205 165-413 20-228 (277)
443 PRK15112 antimicrobial peptide 100.0 2.1E-33 4.7E-38 315.6 23.6 207 165-413 26-238 (267)
444 TIGR00968 3a0106s01 sulfate AB 100.0 3E-33 6.4E-38 309.1 24.3 206 165-413 13-219 (237)
445 PRK13540 cytochrome c biogenes 100.0 1.5E-33 3.2E-38 303.4 21.1 194 829-1052 2-197 (200)
446 PRK14242 phosphate transporter 100.0 2.8E-33 6.1E-38 312.7 24.2 210 166-413 20-236 (253)
447 PRK15134 microcin C ABC transp 100.0 2.2E-33 4.7E-38 345.7 25.6 221 828-1066 5-241 (529)
448 TIGR02203 MsbA_lipidA lipid A 100.0 8.4E-32 1.8E-36 335.9 40.1 213 827-1066 329-551 (571)
449 COG4987 CydC ABC-type transpor 100.0 3.6E-34 7.8E-39 327.6 17.1 212 828-1067 336-557 (573)
450 PRK14267 phosphate ABC transpo 100.0 2.4E-33 5.3E-38 313.2 23.6 213 165-413 17-236 (253)
451 TIGR00958 3a01208 Conjugate Tr 100.0 6.4E-34 1.4E-38 361.0 21.3 211 827-1066 477-697 (711)
452 PRK14237 phosphate transporter 100.0 7.9E-33 1.7E-37 311.0 27.7 211 165-413 33-250 (267)
453 PRK09984 phosphonate/organopho 100.0 1.5E-33 3.4E-38 316.2 22.0 216 165-412 17-240 (262)
454 PRK13645 cbiO cobalt transport 100.0 1.7E-33 3.6E-38 320.2 22.3 206 165-413 24-239 (289)
455 PRK13545 tagH teichoic acids e 100.0 3.2E-33 6.9E-38 328.9 25.1 208 828-1067 21-228 (549)
456 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-33 3E-38 298.9 20.0 159 856-1057 15-180 (182)
457 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-33 2.4E-38 309.4 19.9 210 828-1065 2-220 (221)
458 COG1123 ATPase components of v 100.0 3.5E-33 7.6E-38 327.2 25.2 223 828-1066 5-239 (539)
459 TIGR01277 thiQ thiamine ABC tr 100.0 3.1E-33 6.7E-38 304.0 23.0 199 167-408 13-212 (213)
460 COG1132 MdlB ABC-type multidru 100.0 1.8E-33 3.8E-38 349.8 23.9 208 165-414 342-552 (567)
461 COG0396 sufC Cysteine desulfur 100.0 6.8E-33 1.5E-37 287.2 24.1 234 828-1086 3-243 (251)
462 PRK11231 fecE iron-dicitrate t 100.0 2.1E-33 4.6E-38 313.9 22.0 209 165-413 15-226 (255)
463 COG4618 ArpD ABC-type protease 100.0 1.1E-33 2.5E-38 320.2 19.9 238 106-416 322-562 (580)
464 cd03253 ABCC_ATM1_transporter 100.0 7.4E-34 1.6E-38 314.1 18.1 210 829-1066 1-219 (236)
465 PRK11176 lipid transporter ATP 100.0 1.6E-33 3.5E-38 351.8 23.2 209 165-414 356-567 (582)
466 cd03217 ABC_FeS_Assembly ABC-t 100.0 3.3E-33 7.2E-38 300.5 22.4 183 829-1065 1-188 (200)
467 cd03248 ABCC_TAP TAP, the Tran 100.0 5.8E-34 1.3E-38 312.8 16.7 209 828-1057 11-224 (226)
468 PRK10744 pstB phosphate transp 100.0 7.4E-33 1.6E-37 310.3 25.9 210 166-413 27-243 (260)
469 PRK10790 putative multidrug tr 100.0 2.4E-33 5.3E-38 350.5 24.5 206 166-414 355-563 (592)
470 cd03262 ABC_HisP_GlnQ_permease 100.0 1.8E-33 3.9E-38 306.0 20.3 195 165-403 13-213 (213)
471 TIGR03873 F420-0_ABC_ATP propo 100.0 3.4E-33 7.4E-38 312.4 22.9 208 165-412 14-224 (256)
472 TIGR03771 anch_rpt_ABC anchore 100.0 3.6E-33 7.8E-38 305.4 22.3 194 862-1067 1-197 (223)
473 PRK14270 phosphate ABC transpo 100.0 6.1E-33 1.3E-37 309.5 24.4 211 165-413 17-234 (251)
474 PRK14235 phosphate transporter 100.0 5.3E-33 1.2E-37 312.4 24.0 211 166-413 33-250 (267)
475 PRK14241 phosphate transporter 100.0 5.3E-33 1.1E-37 311.2 23.8 212 165-413 17-241 (258)
476 PRK14245 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 310.1 23.4 210 165-413 16-233 (250)
477 PRK11701 phnK phosphonate C-P 100.0 6.5E-33 1.4E-37 310.5 24.0 207 165-413 19-240 (258)
478 TIGR01842 type_I_sec_PrtD type 100.0 1.7E-33 3.8E-38 347.9 21.3 213 827-1066 315-537 (544)
479 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-33 3.9E-38 297.0 18.2 176 829-1064 1-178 (178)
480 PRK14256 phosphate ABC transpo 100.0 8.9E-33 1.9E-37 308.3 24.8 212 165-413 17-235 (252)
481 TIGR00630 uvra excinuclease AB 100.0 1.4E-31 3.1E-36 338.2 38.6 123 928-1066 789-920 (924)
482 PRK14269 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 307.6 24.0 212 165-413 15-229 (246)
483 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-33 3.8E-38 351.3 21.0 211 827-1066 333-553 (588)
484 PRK14239 phosphate transporter 100.0 8.9E-33 1.9E-37 308.5 24.5 210 166-413 19-235 (252)
485 cd03297 ABC_ModC_molybdenum_tr 100.0 6.3E-33 1.4E-37 301.9 22.7 192 170-407 16-214 (214)
486 cd03246 ABCC_Protease_Secretio 100.0 2.1E-33 4.6E-38 295.0 18.2 168 829-1057 1-171 (173)
487 PRK14274 phosphate ABC transpo 100.0 8E-33 1.7E-37 309.9 24.0 211 165-413 25-242 (259)
488 COG4598 HisP ABC-type histidin 100.0 1.1E-33 2.4E-38 279.5 14.9 204 852-1066 17-236 (256)
489 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.9E-33 6.4E-38 356.7 23.1 206 165-414 492-700 (710)
490 COG4148 ModC ABC-type molybdat 100.0 7.9E-34 1.7E-38 299.4 14.6 195 170-413 16-217 (352)
491 PRK10418 nikD nickel transport 100.0 1.1E-32 2.4E-37 307.8 24.3 206 166-413 17-229 (254)
492 COG4148 ModC ABC-type molybdat 100.0 6E-34 1.3E-38 300.3 13.1 191 859-1067 16-214 (352)
493 COG4181 Predicted ABC-type tra 100.0 4.1E-33 8.9E-38 273.9 18.0 202 160-405 18-226 (228)
494 PRK14262 phosphate ABC transpo 100.0 9.9E-33 2.1E-37 307.7 23.7 211 165-413 16-233 (250)
495 TIGR02868 CydC thiol reductant 100.0 1.2E-33 2.7E-38 348.7 18.1 188 827-1040 333-529 (529)
496 PRK14244 phosphate ABC transpo 100.0 9E-33 1.9E-37 308.2 23.3 212 165-413 18-236 (251)
497 cd03214 ABC_Iron-Siderophores_ 100.0 2.2E-33 4.7E-38 296.9 17.3 175 831-1064 2-180 (180)
498 PRK14271 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 309.8 25.1 211 165-413 34-250 (276)
499 TIGR00958 3a01208 Conjugate Tr 100.0 5.3E-33 1.1E-37 352.7 23.4 206 165-414 494-702 (711)
500 TIGR03375 type_I_sec_LssB type 100.0 6.8E-33 1.5E-37 352.2 24.4 208 165-414 478-688 (694)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-216 Score=1971.33 Aligned_cols=1102 Identities=54% Similarity=0.930 Sum_probs=1023.7
Q ss_pred CCcHHHhhHHHHhhCCChhhhhhcccccC-CCCcceeccCCCChHhhHHHHHHHHhccccCHHHHHHHHHHHHhhcCCCC
Q 000971 36 EDDEEALKWAALEKLPTYNRLRKGLLTTS-RGEAFEVDVSNLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDL 114 (1206)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (1206)
+||||++||||++||||++| +.+.+. ++ ++|+.++++.+++.++++..+..++|+++++.++|+|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 44999999999999999998 555432 22 79999999999999999999999999999999999999998 89
Q ss_pred CcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEcCCCCcHHHH
Q 000971 115 PKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTL 194 (1206)
Q Consensus 115 p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTL 194 (1206)
|.++++++++.+++++..| ||+.|...+.++.+++..+.. ++.+++||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998766 999999999999887765543 5567899999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcC
Q 000971 195 LLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAG 274 (1206)
Q Consensus 195 L~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1206)
|++|+|.++..++..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|++++
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~-- 232 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKL-- 232 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHH--
Confidence 9999999998877889999999999999999999999999999999999999999999999999987 55565543
Q ss_pred CCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000971 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGL 354 (1206)
Q Consensus 275 i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgL 354 (1206)
..++|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|+||
T Consensus 233 ---------------------~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 233 ---------------------AAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ---------------------HHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 13789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHH
Q 000971 355 DSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1206)
Q Consensus 355 Ds~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1206)
||+|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHHH
Q 000971 435 EVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELL 514 (1206)
Q Consensus 435 ~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~ 514 (1206)
++++++++.++|..+..|+.+.+++|+.+.|.+++.+.++..+++.++++.+.++.++..++|.+++|+|+++|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCC
Q 000971 515 LMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRF 594 (1206)
Q Consensus 515 l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~ 594 (1206)
+++||.+++++++++.+++++++|++|+++.+ .+..++..+.|++||++++.+|+++++++++++++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999985 4556778899999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc----
Q 000971 595 FPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF---- 670 (1206)
Q Consensus 595 y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~---- 670 (1206)
|++||++++++++++|..++++++|.+|+||++|+.+++++||.||+++++++++++++||+++++++++..|+++
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------cchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCC---------------ccchhHHHhhc
Q 000971 671 --------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNS---------------YESIGVQVLKS 721 (1206)
Q Consensus 671 --------------~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~---------------~~~~g~~~L~~ 721 (1206)
.+||+||+|++|+||++|+++++++|||++++|.|.+.++ ..+.|..++..
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 8899999999999999999999999999999999973221 25678899999
Q ss_pred cCcc-----cchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCcc
Q 000971 722 RGFF-----AHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDIS 796 (1206)
Q Consensus 722 ~~~~-----~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1206)
++|. ...+|+|+++|+++||.++|+++++++++|+++..+.+..+..+....+........ .....
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~ 760 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGS---------SSEIE 760 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccc---------ccccc
Confidence 8888 777899999999999999999999999999999988887766443322211100000 00000
Q ss_pred CCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccC
Q 000971 797 GRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVS 876 (1206)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~s 876 (1206)
.. .+ ..+..+.+++.|++|..++++||.|.+++|.+++.+| +++++|+||||.++||.+|||||+|
T Consensus 761 ~~---------~~--s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~S 826 (1391)
T KOG0065|consen 761 KL---------DD--SSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGES 826 (1391)
T ss_pred cc---------cc--ccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCC
Confidence 00 00 0111345788899999999999999999999988877 6789999999999999999999999
Q ss_pred CCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHH
Q 000971 877 GAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFI 956 (1206)
Q Consensus 877 GaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v 956 (1206)
|||||||||+|+||++.|.++|+|+|||.|+++..|+|++|||+|+|+|.+.+||+|.|.|+|+||+|.+++.+++.++|
T Consensus 827 GAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yV 906 (1391)
T KOG0065|consen 827 GAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYV 906 (1391)
T ss_pred CCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000971 957 EEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1035 (1206)
Q Consensus 957 ~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P-~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1035 (1206)
++|++.++|++++|.+||.+| +|||++|||||+||+||++|| .||||||||||||+++++.|+++||+++++|+||||
T Consensus 907 e~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlC 985 (1391)
T KOG0065|consen 907 EEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILC 985 (1391)
T ss_pred HHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999999 999999999999999999999 899999999999999999999999999999999999
Q ss_pred EecCCchHHHHhcCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceeeeeeccchhhhcCCCHHHH
Q 000971 1036 TIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDI 1115 (1206)
Q Consensus 1036 ~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~ 1115 (1206)
||||||.++|+.||++++|++||++||+|++|++|+++++||++++|++ |++..||||||||+++.+.+.+.+.||++.
T Consensus 986 TIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~ 1064 (1391)
T KOG0065|consen 986 TIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEI 1064 (1391)
T ss_pred EecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHH
Confidence 9999999999999999999999999999999999999999999999985 666669999999999999888889999999
Q ss_pred HhhcHHHHHHHHHHHHhcCCCCC-CCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcc
Q 000971 1116 FRCSELYRRNKALIEELSKPTPG-SKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWD 1194 (1206)
Q Consensus 1116 ~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~ 1194 (1206)
|++|++++++++++++++.+.++ ..+..+.++|++|+|.|++.|+||++++|||+|+|+++|++++++.||+||++||+
T Consensus 1065 w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~ 1144 (1391)
T KOG0065|consen 1065 WKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWK 1144 (1391)
T ss_pred HhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeee
Confidence 99999999999999999999888 77888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCc
Q 000971 1195 MGSKTLKEPR 1204 (1206)
Q Consensus 1195 ~~~~~~~~~~ 1204 (1206)
+|++.++.|+
T Consensus 1145 ~g~~~q~lqn 1154 (1391)
T KOG0065|consen 1145 VGHNVQGLQN 1154 (1391)
T ss_pred cCCcHHHHHH
Confidence 9988887775
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.3e-194 Score=1899.89 Aligned_cols=1193 Identities=61% Similarity=1.027 Sum_probs=1040.3
Q ss_pred cccccccccccccccCccccccc-------CCcCCcHHHhhHHHHhhCCChhhhhhcccccC-----CCC---cceeccC
Q 000971 10 ASTSLRGNISRWRTSSVGAFSKS-------LREEDDEEALKWAALEKLPTYNRLRKGLLTTS-----RGE---AFEVDVS 74 (1206)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ 74 (1206)
++-+.+.+.++|. .+++|++. +..|||||+|+|||+||||||+|+|++++... .|+ ..|+|++
T Consensus 10 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1470)
T PLN03140 10 RSISRSVSRSSRN--MEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVT 87 (1470)
T ss_pred HHHHHHhhhhhhh--hhhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccc
Confidence 4333333445573 36888542 13678999999999999999999999999652 122 2369999
Q ss_pred CCChHhhHHHHHHHHhccccCHHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhh
Q 000971 75 NLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNY 154 (1206)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1206)
+|+.++++.+++++++++++|+++|++++++|+|++|+++|++||+|+||+|++++.++++++||++|.+.+.++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 167 (1470)
T PLN03140 88 KLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGM 167 (1470)
T ss_pred cCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred hccCCCCcccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCC
Q 000971 155 LGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQH 234 (1206)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~ 234 (1206)
++..++++.+++||+||||.|+|||+++|+||||||||||||+|+|+++++.+++|+|+|||+++++..+++.++||+|+
T Consensus 168 ~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~ 247 (1470)
T PLN03140 168 LGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQN 247 (1470)
T ss_pred hccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEeccc
Confidence 55444555678899999999999999999999999999999999999988777899999999999877777889999999
Q ss_pred CCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 235 d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
|.|++++||+|||.|+++|++++.++++..+..+++++.++.|+.++|.+|++...++.+.+..++++|+.+||++|+||
T Consensus 248 d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t 327 (1470)
T PLN03140 248 DVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDT 327 (1470)
T ss_pred ccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCc
Confidence 99999999999999999998877766666667777888888888899999999988888888899999999999999999
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.||++++++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+
T Consensus 328 ~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~ 407 (1470)
T PLN03140 328 IVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDD 407 (1470)
T ss_pred eeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999999999999998767889999999999999999999
Q ss_pred EEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhh
Q 000971 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 474 (1206)
|++|++|+++|+||++++.+||+++||.||+++++|||+++++++++++++|.....|+++.++++++++|++++.++++
T Consensus 408 vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~ 487 (1470)
T PLN03140 408 IILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQL 487 (1470)
T ss_pred EEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHH
Confidence 99999999999999999999999999999999999999999999988888887777777778999999999999988888
Q ss_pred HHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccc
Q 000971 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1206)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~ 554 (1206)
.+++..+.++...++.....++|..++++|+++|++|++++++||++.+++++++.+++|+++|++|++++++..+..++
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~ 567 (1470)
T PLN03140 488 ENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDG 567 (1470)
T ss_pred HHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhH
Confidence 88777766665556666666789999999999999999999999999999999999999999999999998765555567
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHH
Q 000971 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1206)
Q Consensus 555 ~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 634 (1206)
..+.|++||++++.+|++++++++++.++|||+|||+..||++|+|+++++++++|+.++++++|++++|||+|+.++++
T Consensus 568 ~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 568 ALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc------------------cchhhHHHHHHhhCHHHHHHHHHHHH
Q 000971 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIVAN 696 (1206)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~------------------~~i~~~~~W~~~isp~~y~~~al~~n 696 (1206)
+||.|++++++++++++++|++++++++++.+|+.+ ++||+||+|++|+||++|+++|+++|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 999999999999999999999999999999888654 88999999999999999999999999
Q ss_pred HhcCCccccc-CCCCccchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeecccccccc
Q 000971 697 EFLGYSWKKF-TPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQ 775 (1206)
Q Consensus 697 ef~~~~~~~~-~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 775 (1206)
||.+..|.+. +.+...+.|.++|..+++.....|+|++++++++|+++|+++++++++|+++.......+..+......
T Consensus 728 Ef~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~ 807 (1470)
T PLN03140 728 EMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEME 807 (1470)
T ss_pred hccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhh
Confidence 9999888643 222346789999999999988899999999999999999999999999998766555443211110000
Q ss_pred ccccc--cccccccCCC--CCCCc-cCCCCC-c-cchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcc
Q 000971 776 DNRIR--GTVQLSARGE--SGEDI-SGRNSS-S-KSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQG 848 (1206)
Q Consensus 776 ~~~~~--~~~~~~~~~~--~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~ 848 (1206)
..... ...+...... ..+.. ...... . ......+.......++++.+|+.|.+++|+||+|+|+.|.+++..+
T Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~ 887 (1470)
T PLN03140 808 GEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQG 887 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccc
Confidence 00000 0000000000 00000 000000 0 0000000000112235667789999999999999999887665555
Q ss_pred cccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCC
Q 000971 849 VLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPF 928 (1206)
Q Consensus 849 ~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~ 928 (1206)
...+++.+|+|||+.++||+++||||||||||||||++|+|+.++|..+|+|.+||.+..+..+++.+|||+|+|.+++.
T Consensus 888 ~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~ 967 (1470)
T PLN03140 888 VTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQ 967 (1470)
T ss_pred cCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCC
Confidence 44556789999999999999999999999999999999999987777899999999887655567789999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPT 1008 (1206)
+||+|+|.|++.+|.+...+.++++++++++++.++|.+++|+.+|.+++++|||||||||+||+||+.+|+||||||||
T Consensus 968 lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 968 VTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred CcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 99999999999888776666777778899999999999999999998888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCC
Q 000971 1009 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKD 1088 (1206)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~ 1088 (1206)
||||+.++..|++.|++++++|+|||||+|||+.++++.||++++|++||+++|+|+.+++++++++||++++|+++||+
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~ 1127 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKE 1127 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCC
Confidence 99999999999999999998899999999999977899999999999889999999999999999999999988888999
Q ss_pred CCCccceeeeeeccchhhhcCCCHHHHHhhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcHHHHHHHHHHHHHHHHh
Q 000971 1089 GYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSAFTQFMACLWKQHWSYW 1168 (1206)
Q Consensus 1089 ~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~ 1168 (1206)
++||||||||+++.+.+...+.||++.|++|++++++++.++++..+.+..++..++++|++++|+|++.|+||++++||
T Consensus 1128 ~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~ 1207 (1470)
T PLN03140 1128 KYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYW 1207 (1470)
T ss_pred CCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999987666555679999999999999888888877776666666666788999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Q 000971 1169 RNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTLKEPR 1204 (1206)
Q Consensus 1169 R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~ 1204 (1206)
|||.|+++|+++++++||++|++||++|++..++|+
T Consensus 1208 R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~ 1243 (1470)
T PLN03140 1208 RSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNAND 1243 (1470)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhh
Confidence 999999999999999999999999999998877665
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.4e-153 Score=1521.25 Aligned_cols=1060 Identities=32% Similarity=0.549 Sum_probs=855.2
Q ss_pred ccCHHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeec
Q 000971 93 EVDNEKFLLKLKSRIDRVGIDLP--KVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKD 170 (1206)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~p--~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 170 (1206)
+.|++++++.++++.++.+...| +++|+|+||+|++. ..+...+||++|.+.+.+......+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 35777888776666666655555 99999999999994 44667789999998887765443321 1234456789999
Q ss_pred eeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC-CceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCCHHHHH
Q 000971 171 VSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMTVRETL 247 (1206)
Q Consensus 171 vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lTV~Etl 247 (1206)
||+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.|||.++++... ++.++||+|+|.|+|.+||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 999999999999999999999999999999974321 259999999998764332 35699999999999999999999
Q ss_pred HHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChh
Q 000971 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1206)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1206)
.|+++++.+..+... ..+. +..+..++.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPDG---VSRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCCC---CCHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 999887643211000 0000 01123456789999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000971 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1206)
Q Consensus 328 qkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1206)
|||||+||++|+.+|+|+||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987667899999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccc--
Q 000971 408 PRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKS-- 485 (1206)
Q Consensus 408 ~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~-- 485 (1206)
+++++.+||+++||.||++.++|||+++++++.++ +++... +.....++++++++|+.++.++++..+++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987643 222211 11123578999999999887766655543221110
Q ss_pred -------------ccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccc
Q 000971 486 -------------KSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLT 552 (1206)
Q Consensus 486 -------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~ 552 (1206)
...+.....++|..++++|+++|++|.++.++||+..++.++++.+++|+++|++|++.+.+. .
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---S 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---h
Confidence 000112234568899999999999999999999999999999999999999999999987543 3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCc
Q 000971 553 DGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPN 632 (1206)
Q Consensus 553 ~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~ 632 (1206)
+...+.|++||++++.+|.++.++...+.+||+|+|||..++|++++|++|++++++|+.++.+++|++++|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc------------------cchhhHHHHHHhhCHHHHHHHHHH
Q 000971 633 AGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIV 694 (1206)
Q Consensus 633 ~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~------------------~~i~~~~~W~~~isp~~y~~~al~ 694 (1206)
+++||.|+++++++.+++.+++++++++++++..|+.+ ++||+||+|++|+||++|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999998877544 789999999999999999999999
Q ss_pred HHHhcCCccccc---CC-------------C--------CccchhHHHhhc-cCcccchhhHHHHHHHHHHHHHHHHHHH
Q 000971 695 ANEFLGYSWKKF---TP-------------N--------SYESIGVQVLKS-RGFFAHAYWYWLGLGALFGFILLFNLGF 749 (1206)
Q Consensus 695 ~nef~~~~~~~~---~~-------------~--------~~~~~g~~~L~~-~~~~~~~~~~w~~~g~l~g~~~~f~~~~ 749 (1206)
.|||.+..+.|. +. | .....|.++|.. +++. ..|+|++++++++|+++|.++.
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~--~~~~w~n~gil~~~~v~f~~~~ 686 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYY--NSHKWRNFGIIIGFTVFFFFVY 686 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcc--cchhhHHHHHHHHHHHHHHHHH
Confidence 999999998874 11 0 123578899984 4554 4689999999999999999999
Q ss_pred HHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEE
Q 000971 750 TMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSL 829 (1206)
Q Consensus 750 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 829 (1206)
+++++|.++......++..+....... .....+......+.++...... .. ...+.+...... ..........+
T Consensus 687 ~l~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~~-~~--~~~~~~~~~~~~-~~~~~~~~~~l 760 (1394)
T TIGR00956 687 ILLTEFNKGAKQKGEILVFRRGSLKRA--KKAGETSASNKNDIEAGEVLGS-TD--LTDESDDVNDEK-DMEKESGEDIF 760 (1394)
T ss_pred HHHHHhccccCCCCceEeeccccccch--hhcccccccccccccccccCCC-Cc--cccccccccccc-cccccCCCceE
Confidence 999999986554433322111000000 0000000000000000000000 00 000000000000 00000112358
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEcCccCC
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKK 908 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~ 908 (1206)
+|+||+|.++.+ .+++.+|+|||++++||+++||||||||||||||++|+|+.++| +.+|+|.+||.+..
T Consensus 761 ~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~ 831 (1394)
T TIGR00956 761 HWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD 831 (1394)
T ss_pred EEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC
Confidence 999999988532 12457999999999999999999999999999999999987654 34699999999875
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. .+++.+|||+|+|.+++.+||+|+|.|++.++.+...+.++++++++++++.++|.+++|+.+|.++. +||||||||
T Consensus 832 ~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqR 909 (1394)
T TIGR00956 832 S-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKR 909 (1394)
T ss_pred h-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhH
Confidence 3 46778999999999999999999999999988776666777788899999999999999999987653 899999999
Q ss_pred HHHHHHHhhCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 989 LTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 989 l~ia~aL~~~P~-iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|+||+||+.+|+ ||||||||||||+.++..|+++|++++++|+|||||+|||+..+++.||++++|++||+++|+|+.+
T Consensus 910 l~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 910 LTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 999999999997 9999999999999999999999999988899999999999976788999999999988999999999
Q ss_pred cchhHHHHHHHhCCCcccCCCCCCccceeeeeeccchhhhcCCCHHHHHhhcHHHHHHHHHHHHhcCCCCCCC---CCCC
Q 000971 1068 RHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSK---DLYF 1144 (1206)
Q Consensus 1068 ~~~~~~~~yf~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~ 1144 (1206)
++++++++||+.+ |.++||+++|||||+||+++.+.+.....+|.+.|+.|++++...+.++.+..+....+ +...
T Consensus 990 ~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1394)
T TIGR00956 990 ENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDA 1068 (1394)
T ss_pred cccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccc
Confidence 9999999999986 66679999999999999998755444456899999999988776665555433221111 1112
Q ss_pred CCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcC
Q 000971 1145 PTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTLKEPRS 1205 (1206)
Q Consensus 1145 ~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 1205 (1206)
..+|++||++|+++|++|+++++||||.|+++|+++++++|+++|++||+++++..++|++
T Consensus 1069 ~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~~~i~~~ 1129 (1394)
T TIGR00956 1069 LSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSLQGLQNQ 1129 (1394)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 2468999999999999999999999999999999999999999999999999998887764
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-78 Score=743.86 Aligned_cols=567 Identities=31% Similarity=0.503 Sum_probs=471.8
Q ss_pred CCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEcCCCCcHHH
Q 000971 114 LPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTT 193 (1206)
Q Consensus 114 ~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKST 193 (1206)
...++++|+|+++++... . +..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~-~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------S-KKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------C-CccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 456789999999997632 1 14578999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhc
Q 000971 194 LLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEA 273 (1206)
Q Consensus 194 LL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1206)
||++|+|+......++|+|++||++.+....++.+|||.|+|.++|+|||+|||.|+|.++-+.. +.
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~------ 138 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LS------ 138 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CC------
Confidence 99999999987667899999999887777777899999999999999999999999999876532 11
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000971 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTG 353 (1206)
Q Consensus 274 ~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsg 353 (1206)
.++.+.+++.+++.|||.+|+||+||+...|||||||||||+||..|+.+|+|||+||||||
T Consensus 139 ------------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 139 ------------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 12345678999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHH
Q 000971 354 LDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1206)
Q Consensus 354 LDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1206)
|||.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHH
Q 000971 434 QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISREL 513 (1206)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~ 513 (1206)
.++.+..+..+..... .........++......+............ .........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHHHh
Confidence 9988743110000000 000000011100000000000000000000 00000116789999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhcchhhhhhccc
Q 000971 514 LLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLA-EISMTIAKLPVFYKQRDF 592 (1206)
Q Consensus 514 ~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~kqr~~ 592 (1206)
..++|++.+...+.++.+.+++++|++|++.+.+.... ....|++||.+.+..|..+. .+.....++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999986544322 25678888888888776666 578888999999999999
Q ss_pred CCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc--
Q 000971 593 RFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF-- 670 (1206)
Q Consensus 593 ~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~-- 670 (1206)
++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.+++++..+++.++..+++++.++...+..+
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999976655443
Q ss_pred ----------------cchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCC--CCccchhHHHhhccCcccchhhHH
Q 000971 671 ----------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTP--NSYESIGVQVLKSRGFFAHAYWYW 732 (1206)
Q Consensus 671 ----------------~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~~w 732 (1206)
+.||.||+|+.|+|++.|++++++.|||.+....|... ..+...|.+++...++... ..|
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~ 583 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--SFW 583 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--ccc
Confidence 68999999999999999999999999999744455443 3456778999998888654 468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Q 000971 733 LGLGALFGFILLFNLGFTMAITFLN 757 (1206)
Q Consensus 733 ~~~g~l~g~~~~f~~~~~l~l~~~~ 757 (1206)
.++.++++++++|.++.++++.+..
T Consensus 584 ~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 584 LDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998753
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=5.2e-78 Score=749.87 Aligned_cols=551 Identities=27% Similarity=0.414 Sum_probs=459.9
Q ss_pred cccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCC
Q 000971 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1206)
+.+++||+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44578999999999999999999999999999999999998875556899999999886544467899999999999999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc-
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM- 320 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1206)
||+|||.|+++++.+.... + ++....++.+++.+||.+++||.||+..
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------K------------------------KEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------H------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998876432110 0 0123357889999999999999999864
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.++|||||||||+||++|+.+|+|+||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||+|++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999876 5889999999999999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|+++|+|+++++.+||+++||+||++.+++||+.++++...... .. .....+++.+.|+.+...++.......
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSE-----NE--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCcccc-----cc--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 99999999999999999999999999999999999887533211 00 011234556666655544433322221
Q ss_pred Cccccc---cccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhH
Q 000971 481 PFDKSK---SHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1206)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1206)
...... ..........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 110000 00011122457789999999999999999999999999999999999999999999976543 234456
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHH
Q 000971 558 AGALFFATAMVMFNGLAE-ISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRF 636 (1206)
Q Consensus 558 ~g~lff~~~~~~~~~~~~-~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 636 (1206)
.|++|+.++..+|.++.. +.....++++|+||+..++|++++|+++++++++|+.++.+++|++++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 788999988888876544 4556679999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc------------------cchhhHHHHHHhhCHHHHHHHHHHHHHh
Q 000971 637 FKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIVANEF 698 (1206)
Q Consensus 637 f~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~------------------~~i~~~~~W~~~isp~~y~~~al~~nef 698 (1206)
|.++++++++.+++.+++.+++++++++..|..+ ++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988766543 7899999999999999999999999999
Q ss_pred cCCcc-cccCCC---CccchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000971 699 LGYSW-KKFTPN---SYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFL 756 (1206)
Q Consensus 699 ~~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~ 756 (1206)
.+..+ .|...+ .+...|.++|+.+++... ++|.+++++++++++|.++.++++++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 443211 133468999999988664 469999999999999999999999864
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.2e-77 Score=742.81 Aligned_cols=594 Identities=21% Similarity=0.329 Sum_probs=452.4
Q ss_pred CCCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEcCCCCcHH
Q 000971 113 DLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKT 192 (1206)
Q Consensus 113 ~~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKS 192 (1206)
..++++++|.|+++.+.......+... +...+...-...+ ...+...+++|+|||+.++|||+++|+||||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~-l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKS 108 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISD-ETRQIQERTILNGVTGMASPGEILAVLGPSGSGKS 108 (659)
T ss_pred CCCceEEEEEeEEEEEccCCCcccccc----ccccccccccccc-ccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHH
Confidence 345899999999999764310111111 0110000000000 01112346799999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhh
Q 000971 193 TLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENE 272 (1206)
Q Consensus 193 TLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1206)
|||++|+|++++. ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.+... ..
T Consensus 109 TLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~~---- 175 (659)
T PLN03211 109 TLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------TK---- 175 (659)
T ss_pred HHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------CH----
Confidence 9999999998764 3589999999987532 235689999999999999999999998765422100 00
Q ss_pred cCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCC
Q 000971 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEIST 352 (1206)
Q Consensus 273 ~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEpts 352 (1206)
++....++++++.+||++++||.||+...++|||||||||+||++|+.+|+||+|||||+
T Consensus 176 --------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPts 235 (659)
T PLN03211 176 --------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTS 235 (659)
T ss_pred --------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCC
Confidence 112234678999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHH
Q 000971 353 GLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADF 432 (1206)
Q Consensus 353 gLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adf 432 (1206)
|||+.++.++++.|+++++ .++|+|+++|||..+++++||+|++|++|+++|+|+++++.+||+++||.||++.|||||
T Consensus 236 gLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf 314 (659)
T PLN03211 236 GLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADF 314 (659)
T ss_pred CcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHH
Confidence 9999999999999999876 578999999999888999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC---Cccccc-----cccc-cccccccccchHH
Q 000971 433 LQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTEVYGAGKRE 503 (1206)
Q Consensus 433 l~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~ 503 (1206)
+.++++.....+.....+.+ ...+++.+.|++.. ..+..+.... ...... .... ......+..+++.
T Consensus 315 ~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (659)
T PLN03211 315 LLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFN 390 (659)
T ss_pred HHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHH
Confidence 99998764321100000111 11233334443211 1111111000 000000 0000 0011234568999
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHHHHHHHHHHHH-HHHHHHHHHhhc
Q 000971 504 LLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMF-NGLAEISMTIAK 582 (1206)
Q Consensus 504 ~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~~~~~~~~ 582 (1206)
|+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+.+.|++||.+++.++ ..+..+.....+
T Consensus 391 Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~e 464 (659)
T PLN03211 391 QFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQE 464 (659)
T ss_pred HHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888 78887778999999999999999999874 12345678999999877655 455677777889
Q ss_pred chhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000971 583 LPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGR 662 (1206)
Q Consensus 583 ~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~ 662 (1206)
+++|+||+..++|++++|+++++++++|+.++.+++|++++|||+|+.+++.+||.|+++++++.+++.+++.+++++++
T Consensus 465 r~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~ 544 (659)
T PLN03211 465 RAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIM 544 (659)
T ss_pred hHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccc----------------cchhhHHHHHHhhCHHHHHHHHHHHHHhcCCc-----ccccCCCCccchhHHHhhc
Q 000971 663 SMVVANTF----------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS-----WKKFTPNSYESIGVQVLKS 721 (1206)
Q Consensus 663 s~~~a~~~----------------~~i~~~~~W~~~isp~~y~~~al~~nef~~~~-----~~~~~~~~~~~~g~~~L~~ 721 (1206)
++..|+.+ .+||+||+|++|+||++|++++++.|||.+.+ ..|.........+..++..
T Consensus 545 ~~~~a~~~~~~~~~~~~lfsGf~i~~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~~ 624 (659)
T PLN03211 545 DAKKASTIVTVTMLAFVLTGGFYVHKLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVEE 624 (659)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHhhchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccchh
Confidence 88777543 68999999999999999999999999997643 2343211101111112222
Q ss_pred cCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000971 722 RGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLN 757 (1206)
Q Consensus 722 ~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~ 757 (1206)
..+. ....|.+++++++++++|.++.++++++.+
T Consensus 625 ~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 625 DVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222 234788999999999999999999987653
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.6e-76 Score=776.35 Aligned_cols=580 Identities=22% Similarity=0.380 Sum_probs=476.7
Q ss_pred CCCCCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEcCCCCc
Q 000971 111 GIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASG 190 (1206)
Q Consensus 111 ~~~~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsG 190 (1206)
.++..++.+.|+||++.++.....+ ....+..++.+|+|||+.++||++++|+||||||
T Consensus 860 ~~~~~~~~~~~~~v~y~v~~~~~~~---------------------~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaG 918 (1470)
T PLN03140 860 VLPFTPLAMSFDDVNYFVDMPAEMK---------------------EQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAG 918 (1470)
T ss_pred ccCCCcceEEEEEEEEEEccCcccc---------------------ccccCcCCceEeeCcEEEEECCeEEEEECCCCCC
Confidence 3456677899999999986431100 0011123467999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHh
Q 000971 191 KTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRE 270 (1206)
Q Consensus 191 KSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~ 270 (1206)
|||||++|+|+.++. .++|+|.+||++.+....++.++||+|+|.|++.+||+|||.|++.++.+... .
T Consensus 919 KTTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-------~--- 987 (1470)
T PLN03140 919 KTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-------S--- 987 (1470)
T ss_pred HHHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-------C---
Confidence 999999999997642 46899999998875433456799999999999999999999998765422110 0
Q ss_pred hhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecC
Q 000971 271 NEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEI 350 (1206)
Q Consensus 271 ~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEp 350 (1206)
..+....++++++.+||.+++|+.||+..+++|||||||||+||++|+.+|+|||||||
T Consensus 988 ---------------------~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEP 1046 (1470)
T PLN03140 988 ---------------------KEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 1046 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 00122357889999999999999999888889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC-CeEEEecCh----HHHHHHHHhc-CC-CC
Q 000971 351 STGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD-GQIVYQGPR----ELVLEFFESM-GF-KC 423 (1206)
Q Consensus 351 tsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~c 423 (1206)
|+|||+.++..+++.|+++++ .++|+|+++|||..+++++||++++|++ |+++|+||. +++.+||+++ |+ +|
T Consensus 1047 TsgLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~ 1125 (1470)
T PLN03140 1047 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKI 1125 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCC
Confidence 999999999999999999876 5789999999998889999999999996 899999996 6899999997 66 49
Q ss_pred CCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccccccccccccccccchHH
Q 000971 424 PKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRE 503 (1206)
Q Consensus 424 p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 503 (1206)
|+..|||||+.++++..... ....++.+.|+.++.+++..+.+..................|..+++.
T Consensus 1126 p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 1193 (1470)
T PLN03140 1126 KEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWG 1193 (1470)
T ss_pred CCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHH
Confidence 99999999999998653211 112467788887776655443332111000011111123568899999
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q 000971 504 LLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAE-ISMTIAK 582 (1206)
Q Consensus 504 ~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~-~~~~~~~ 582 (1206)
|++.|++|+++.+|||+.+...|+++.+++|+++|++||+.+.+..+..+.....|++|+++++..+..+.. ++....+
T Consensus 1194 Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~e 1273 (1470)
T PLN03140 1194 QFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVE 1273 (1470)
T ss_pred HHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997665555555567899999888877765544 4566679
Q ss_pred chhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000971 583 LPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGR 662 (1206)
Q Consensus 583 ~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~ 662 (1206)
|++|+|||..++|++++|+++++++++|+.++.+++|.+++|||+|+.++++.||.++++++++.+++.+++.+++++++
T Consensus 1274 R~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p 1353 (1470)
T PLN03140 1274 RTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTP 1353 (1470)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccc------------------cchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCC-ccchhHHH-hhcc
Q 000971 663 SMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNS-YESIGVQV-LKSR 722 (1206)
Q Consensus 663 s~~~a~~~------------------~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-L~~~ 722 (1206)
+..+|..+ ++||+||+|+||+||+.|++++++.|||.+....|.+++. ....+.++ +..+
T Consensus 1354 ~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 1433 (1470)
T PLN03140 1354 NQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHY 1433 (1470)
T ss_pred cHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhc
Confidence 98877543 7899999999999999999999999999998776654431 12345555 5677
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000971 723 GFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQ 758 (1206)
Q Consensus 723 ~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~ 758 (1206)
||.. .|.|.+++++++|+++|.+++.+++++++.
T Consensus 1434 g~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1434 GYDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred CcCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 8864 478999999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-74 Score=709.79 Aligned_cols=768 Identities=20% Similarity=0.260 Sum_probs=413.8
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1206)
+..||+|+|+.|++|+.++|+|||||||||+++.|.++++|+ +|+|.++|.++.++.. +..+|.|+|+|.+|.
T Consensus 365 dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~- 440 (1228)
T KOG0055|consen 365 DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFA- 440 (1228)
T ss_pred cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhhc-
Confidence 577999999999999999999999999999999999999998 9999999999988765 368999999997665
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
.||+||+.|+.. |...+...+++ +.++..--+..|++..||.||+++
T Consensus 441 ~tI~eNI~~G~~-------------------------dat~~~i~~a~--------k~ana~~fi~~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 441 TTIRENIRYGKP-------------------------DATREEIEEAA--------KAANAHDFILKLPDGYDTLVGERG 487 (1228)
T ss_pred ccHHHHHhcCCC-------------------------cccHHHHHHHH--------HHccHHHHHHhhHHhhcccccCCC
Confidence 699999999632 11112222221 112222335568889999999988
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+ .|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++.. .++|+|+ +.|....+-+ +|+|++|++
T Consensus 488 ~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~~ 562 (1228)
T KOG0055|consen 488 V-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVMEE 562 (1228)
T ss_pred C-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEEC
Confidence 7 499999999999999999999999999999999999999999998864 4677777 4455555544 999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHH--HhhcCccchhhhhcccCCCCccCCHHHHHHHHHhch----hhhh-
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFL--QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFH----VGQK- 473 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~----~~~~- 473 (1206)
|+||+.|+++|++.. -| -.++.+ |+.....+. ..+..+ ..++.....+.+. ....
T Consensus 563 G~IvE~G~h~ELi~~---~G-------~Y~~lv~~Q~~~~~~~~-~~~~~~-------~~~~~~~s~~~s~~~~~~~~~~ 624 (1228)
T KOG0055|consen 563 GKIVEQGTHDELIAL---GG-------IYSSLVRLQELEKAAED-EEEEES-------LKEERSRSLKSSSSSPSLSRGS 624 (1228)
T ss_pred CEEEEecCHHHHHhc---cc-------hHHHHHHHHhhhhhhhc-cccccc-------hhhhhhhccccccccccccCCc
Confidence 999999999999852 01 111111 111111110 000000 0000000000000 0000
Q ss_pred hHHhhc-CCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHH-------HHHHHHHHHHHHHHHHhccC
Q 000971 474 ISDELR-TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIF-------KLTQISSVALAFMTLFLRTK 545 (1206)
Q Consensus 474 ~~~~l~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~-------~~~~~~~~ali~gt~f~~~~ 545 (1206)
...... ...+..... ..........++++.++. .+.++...+. +.....+++++++.++--..
T Consensus 625 ~~~~~~~~~~~~e~~~-~~~~~~~~~~s~~~i~k~--------~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 625 NRSNLLSVKPEGEDPE-EPVSEEDEKVSFWRIFKL--------NKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred cccccccccccccccc-cccccccccccHHHHHHh--------ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 000000 000000000 000111123344444433 3333333322 22333445555555443222
Q ss_pred CCC-CccccchhHHHHHHHHHHHHH----------HHHHHHHHHHhhcchhhhh--hcccCCcChhh--HHHHHHH-HHh
Q 000971 546 MHK-HSLTDGGIYAGALFFATAMVM----------FNGLAEISMTIAKLPVFYK--QRDFRFFPPWA--YAIPSWI-LKI 609 (1206)
Q Consensus 546 ~~~-~~~~~~~~~~g~lff~~~~~~----------~~~~~~~~~~~~~~~vf~k--qr~~~~y~~~a--~~la~~i-~~i 609 (1206)
... +........+.++|.++.... |.-+.+....--+...|.+ ..+..||.--- -.+.+-+ .+.
T Consensus 696 ~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da 775 (1228)
T KOG0055|consen 696 PPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDA 775 (1228)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcch
Confidence 111 111111122444444333221 1112222211112222322 12223332111 1121111 111
Q ss_pred h---------HH----HHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhh--------h-
Q 000971 610 P---------IS----FLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVV--------A- 667 (1206)
Q Consensus 610 P---------~~----~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~--------a- 667 (1206)
| ++ .+..++..+++-|..|.....- ...++-++........+++......... |
T Consensus 776 ~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv----~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~ 851 (1228)
T KOG0055|consen 776 SNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALV----VLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAI 851 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 1 11 1111111111111111100000 0000000011111111111111111000 0
Q ss_pred ccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhhccCcccchhhHHHHHHHHHHHHHH---
Q 000971 668 NTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILL--- 744 (1206)
Q Consensus 668 ~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~--- 744 (1206)
-...+|.. --.+..+.-+.+.|...-- .+ .. ..... ..|.+++.-+...+.
T Consensus 852 eai~NIrT---------V~al~~e~~~~~~y~~~l~-----~p----~~------~~~~~--~~i~gl~f~~sqs~~~~~ 905 (1228)
T KOG0055|consen 852 EAVSNIRT---------VAALCAEEKFMELYKEELE-----KP----RK------SSFKR--GLISGLGFGFSQSLLFFV 905 (1228)
T ss_pred HHHHhHHH---------HHHHhhHHHHHHHHHHHHH-----HH----HH------HHHHH--HHHHHHHHHHHHHHHHHH
Confidence 00011110 0011112222222211000 00 00 00000 111111111111111
Q ss_pred HHHHHHHHHHhccccCCCcceeecccccc----cc-ccccccccccccCCCCCCCccCCCCCccc--hhhhcccCCCCCC
Q 000971 745 FNLGFTMAITFLNQLEKPRAVITEESESN----KQ-DNRIRGTVQLSARGESGEDISGRNSSSKS--LILTEAQGSHPKK 817 (1206)
Q Consensus 745 f~~~~~l~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 817 (1206)
+.+.++.+...... ........... .. ............+.. ....+.... .....+.-+....
T Consensus 906 ~A~~f~~G~~Li~~----g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~-----ka~~Aa~~iF~i~dr~~~i~~~~~ 976 (1228)
T KOG0055|consen 906 YALSFWYGARLISN----GEMTFEDVFRVFMALSFTAMALGQASSYAPDIS-----KAKIAAGSIFEILDRKPTIDPDST 976 (1228)
T ss_pred HHHHHHHhHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHH-----HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 11111111111100 00000000000 00 000000000000000 000000000 0000000000111
Q ss_pred CCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeE
Q 000971 818 RGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT 897 (1206)
Q Consensus 818 ~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~ 897 (1206)
.+...|.....++|+||+|.||..+ ..+||+|+|++|++|+.+||||||||||||.+.+|-+..+ +..
T Consensus 977 ~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~ 1044 (1228)
T KOG0055|consen 977 SGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDA 1044 (1228)
T ss_pred CCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 2223344456899999999998654 4679999999999999999999999999999999987766 458
Q ss_pred EEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC-------Ccc
Q 000971 898 GNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-------LKP 967 (1206)
Q Consensus 898 G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~ 967 (1206)
|.|.|||.+++. ...|+.+|.|.|+|.++. -|++||+.|+. . .++.+ .+.++++..+ |.+
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~----eIi~Aak~ANaH~FI~sLP~ 1114 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEE----EIIEAAKLANAHNFISSLPQ 1114 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHH----HHHHHHHHhhhHHHHhcCcC
Confidence 999999998765 346789999999999986 79999999981 1 13333 3566666554 445
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHh
Q 000971 968 LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA 1047 (1206)
Q Consensus 968 ~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~ 1047 (1206)
-.|+.+|..|. .||||||||++|||||++||+||+|||.||+||+++.+.|+++|.+. ..|||.|+++|++| ..+.
T Consensus 1115 GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLS--TIqn 1190 (1228)
T KOG0055|consen 1115 GYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLS--TIQN 1190 (1228)
T ss_pred cccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchh--hhhc
Confidence 56788887664 79999999999999999999999999999999999999999999986 46999999999987 4678
Q ss_pred cCeEEEEecCcEEEEEcCC
Q 000971 1048 FDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1048 ~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+|.|.++++ |+++..|+.
T Consensus 1191 aD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1191 ADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred CCEEEEEEC-CEEEecccH
Confidence 999999985 899999984
No 9
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-73 Score=722.55 Aligned_cols=763 Identities=20% Similarity=0.255 Sum_probs=448.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
.+.|+|||+.|++|++++|+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|+++.+ +.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~-ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQ-NGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhh-CCcHH
Confidence 34899999999999999999999999999999999999975 99999999 489999998555 56999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
|||.|+..+. ..||+.+.+.|..++|.+++|++| .|.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CC
Confidence 9999998765 378999999999999999999999 499999988 79
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~-~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
||||||||++|||++++++|++||+|.|++|+++..+|++ |++.+. .++|+|++.| .-+....+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTH--ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTH--QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeC--chhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999995 886543 3466666544 4577888999999999999
Q ss_pred EEecChHHHHH---HHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 404 VYQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 404 v~~G~~~~~~~---~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
+..|+++|+.+ .|+.+ ...+......+ .+.++. ..+ ....+. +. +.........+. .
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~~~~~~~~~~~-----~~~~~~-------~~~---~~~~~~-~~-~~~~~~~~~~~~-~- 780 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-AHEEESEQEEE-----ASEKDL-------ESG---ESSRES-ES-RSLESLSSEEEK-S- 780 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-hhccchhhccc-----cccccc-------ccc---ccccch-hh-hhhhhhcccccc-c-
Confidence 99999999883 33332 10000000000 000000 000 000000 00 000000000000 0
Q ss_pred Cccccccccc-cccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHH-HHHHHHHHHHhccCCCCC---cc--cc
Q 000971 481 PFDKSKSHRA-ALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQIS-SVALAFMTLFLRTKMHKH---SL--TD 553 (1206)
Q Consensus 481 ~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~-~~ali~gt~f~~~~~~~~---~~--~~ 553 (1206)
...+....+. .......+.-.|...+ +.+.....-....++-+.... .+..+.+..|+..+.+.. .. .+
T Consensus 781 ~~~~~~~~~~~~~ee~~~G~v~~~vY~----~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~ 856 (1381)
T KOG0054|consen 781 KDEKEEEDKLVQEEERETGKVSWSVYK----KYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVS 856 (1381)
T ss_pred ccccchhhHHHHHHHHhcCEeeHHHHH----HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Confidence 0000000000 0000001111111111 111110111111111111111 122223333333332221 10 12
Q ss_pred chhHHH----HHHHHHHHHHHHHHHHHHHH--------------h--hcchhhhhhcccCCcChhhHHHHHHHHHhhHHH
Q 000971 554 GGIYAG----ALFFATAMVMFNGLAEISMT--------------I--AKLPVFYKQRDFRFFPPWAYAIPSWILKIPISF 613 (1206)
Q Consensus 554 ~~~~~g----~lff~~~~~~~~~~~~~~~~--------------~--~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~ 613 (1206)
...|.+ ..+...++.++.++.-.... + +....|.....++..+.++..+..+...+|..+
T Consensus 857 ~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~ 936 (1381)
T KOG0054|consen 857 TSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTL 936 (1381)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHH
Confidence 222222 22222222222222111111 1 123356666777888888999999999999877
Q ss_pred HHHHHHHhhhhhhccCCCcHHHHHHHHHHHHH--------HHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCH
Q 000971 614 LEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLA--------VNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSP 685 (1206)
Q Consensus 614 ~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l--------~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp 685 (1206)
...+...+.+-..++....+...|....+.+. ....++.-.+.+.+++++++.++.-+++.+.+..-
T Consensus 937 ~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIR----- 1011 (1381)
T KOG0054|consen 937 EFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIR----- 1011 (1381)
T ss_pred HHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceee-----
Confidence 66554444333333322222222222221111 12234445566788899998887654443322110
Q ss_pred HHHHHHHHHHHHhcCCc-------ccccCCCCccchhHHHhhccCcccchhhHHH-----HHHHHHHHHHHHHHHHHHHH
Q 000971 686 MSYAQNAIVANEFLGYS-------WKKFTPNSYESIGVQVLKSRGFFAHAYWYWL-----GLGALFGFILLFNLGFTMAI 753 (1206)
Q Consensus 686 ~~y~~~al~~nef~~~~-------~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~-----~~g~l~g~~~~f~~~~~l~l 753 (1206)
+|..+.....++...- +.....+.|.....+.+...-+........+ .-..++|+.+.|.+..+-.+
T Consensus 1012 -Af~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l 1090 (1381)
T KOG0054|consen 1012 -AFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLL 1090 (1381)
T ss_pred -eccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHH
Confidence 0111111111111000 0000000000000010000000000000000 00112222222222222222
Q ss_pred HhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCCCccchhhhcccCCCCCCCCCcCCCCC--cEEEE
Q 000971 754 TFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEP--HSLTF 831 (1206)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ 831 (1206)
.|.- +...+.+....+.|+....... ..+.+ .........+.+| +.++|
T Consensus 1091 ~~~v----------------------R~~~elEn~m~SVERv~eY~~~-----~~E~p--~~~~~~~pp~~WP~~G~I~f 1141 (1381)
T KOG0054|consen 1091 QWLV----------------------RQSSELENNMVSVERVLEYTDI-----PSEAP--LEIEESRPPPSWPSKGEIEF 1141 (1381)
T ss_pred HHHH----------------------HHHHHHHhcchhhhHHHHHhcC-----CCCCC--CCCcCCCCCCCCCCCCeEEE
Confidence 2211 1111111111122221111000 00100 0010110112223 47999
Q ss_pred EeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc--
Q 000971 832 DEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-- 909 (1206)
Q Consensus 832 ~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-- 909 (1206)
+|++.+|.- +-..||+|||+.|+|||++||+|++|||||||+++|.+...+ .+|+|.|||.++.+
T Consensus 1142 ~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~--~~G~I~IDgvdI~~ig 1208 (1381)
T KOG0054|consen 1142 EDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP--AEGEILIDGVDISKIG 1208 (1381)
T ss_pred EEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc--cCCeEEEcCeeccccc
Confidence 999877641 223699999999999999999999999999999999987663 57999999998765
Q ss_pred -ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccC------CCCCCCCC
Q 000971 910 -ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LPGVSGLS 982 (1206)
Q Consensus 910 -~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g------~~~~~~LS 982 (1206)
...|++++.+||+|.++. -|+|.|| |+..+..++.++++||.++|.+...++.+ .+++.++|
T Consensus 1209 L~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~S 1277 (1381)
T KOG0054|consen 1209 LHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFS 1277 (1381)
T ss_pred HHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCC
Confidence 356788999999998765 3666655 67777788899999999999877655443 24567899
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-.+ +||||++.|..+. + .-+|||+||++ |+++.
T Consensus 1278 vGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~v~E 1353 (1381)
T KOG0054|consen 1278 VGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GRVVE 1353 (1381)
T ss_pred hHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch-h-hhcCeEEEeeC-CeEee
Confidence 9999999999999999999999999999999999999999999764 7999999999873 4 45799999996 79999
Q ss_pred EcCCC
Q 000971 1063 VGPLG 1067 (1206)
Q Consensus 1063 ~g~~~ 1067 (1206)
+|++.
T Consensus 1354 fdsP~ 1358 (1381)
T KOG0054|consen 1354 FDSPA 1358 (1381)
T ss_pred cCChH
Confidence 99873
No 10
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-73 Score=702.73 Aligned_cols=543 Identities=24% Similarity=0.366 Sum_probs=449.0
Q ss_pred cccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCC
Q 000971 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1206)
.+++++|+||+|.++||.+|||||+|||||||||++|||+... ..++|+|.+||.+.++...+|.+|||.|+|.|.|++
T Consensus 801 G~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 801 GGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCccc
Confidence 3668899999999999999999999999999999999999764 368999999999998777789999999999999999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||||.|.|+|.++.+.+. . .++....+|++++.|+|++++|.+||+.+
T Consensus 880 TVrESL~fSA~LRlp~~v-------~------------------------~~ek~~yVe~Vi~lleL~~~~daiVG~~G- 927 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEV-------S------------------------DEEKYEYVEEVIELLELKEYADALVGLPG- 927 (1391)
T ss_pred chHHHHHHHHHHcCCCcC-------C------------------------HHHHHHHHHHHHHHhCchhhhhhhccCCC-
Confidence 999999999988754321 1 12233578999999999999999999988
Q ss_pred ccCChhhhhHHHHHHHHhcCC-ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc-
Q 000971 322 RGISGGERKRVTTGEMMVGPA-LALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS- 399 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~-~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~- 399 (1206)
+|||.+||||++||..|+.+| .||||||||||||+.++..|++.+|++++ .|+|++|+||||+..+++.||++++|.
T Consensus 928 ~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkr 1006 (1391)
T KOG0065|consen 928 SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKR 1006 (1391)
T ss_pred CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhc
Confidence 899999999999999999999 99999999999999999999999999997 789999999999999999999999997
Q ss_pred CCeEEEecCh----HHHHHHHHhcC-CCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhh
Q 000971 400 DGQIVYQGPR----ELVLEFFESMG-FKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1206)
Q Consensus 400 ~G~iv~~G~~----~~~~~~f~~~G-~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 474 (1206)
.|++||.||. +.+++||++.| .+||+..|||||+.++++...+.. ...++++.|+++..+++.
T Consensus 1007 GGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~ 1074 (1391)
T KOG0065|consen 1007 GGQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRN 1074 (1391)
T ss_pred CCeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHH
Confidence 5799999996 45778999987 899999999999999987643321 123788899998888777
Q ss_pred HHhh---cCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Q 000971 475 SDEL---RTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSL 551 (1206)
Q Consensus 475 ~~~l---~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~ 551 (1206)
.+++ ..+... .........+|..++|.|++.|++|++...||++...+.|++..++.++++|..||+.+ ++.
T Consensus 1075 ~e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~ 1149 (1391)
T KOG0065|consen 1075 KELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNV 1149 (1391)
T ss_pred HHHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcH
Confidence 6544 333322 12223345568999999999999999999999999999999999999999999999987 345
Q ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCC
Q 000971 552 TDGGIYAGALFFATAMVMFN-GLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCD 630 (1206)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~-~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~ 630 (1206)
++.+..++++|.++++...+ .-......-.++-+++||+..++|+..+|.++.+++++|+.++..++|.++.||++||.
T Consensus 1150 q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~ 1229 (1391)
T KOG0065|consen 1150 QGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFY 1229 (1391)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccch
Confidence 56666777777766654432 22233444567889999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc------------------cchhhHHHHHHhhCHHHHHHHH
Q 000971 631 PNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNA 692 (1206)
Q Consensus 631 ~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~------------------~~i~~~~~W~~~isp~~y~~~a 692 (1206)
.++.+|+.+++..++..+....++.++.+++|+...|..+ +.||.||+|+||+||+.|..++
T Consensus 1230 ~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~g 1309 (1391)
T KOG0065|consen 1230 WTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEG 1309 (1391)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHH
Confidence 9999999999999999999999999999999988766433 7899999999999999999999
Q ss_pred HHHHHhcCCcccccCCC-------CccchhHHHhhccC----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000971 693 IVANEFLGYSWKKFTPN-------SYESIGVQVLKSRG----FFAHAYWYWLGLGALFGFILLFNLGFTMAITFLN 757 (1206)
Q Consensus 693 l~~nef~~~~~~~~~~~-------~~~~~g~~~L~~~~----~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~ 757 (1206)
++...+++..-.|...+ ...+.|..+-..++ +..+... ....+.++|.+.+.+++.+.+.|.+
T Consensus 1310 li~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1310 LISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHHH
Confidence 99999998877765332 22345554444444 3322110 0112234455666666666666553
No 11
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-68 Score=706.04 Aligned_cols=216 Identities=27% Similarity=0.404 Sum_probs=189.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++. .++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4889999988741 125699999999999999999999999999999999998764 489999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+.+|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2235679999999999999999999998776653 334445667899999999999988875 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999987 68889999999985 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 2154 ~ 2154 (2272)
T TIGR01257 2154 I 2154 (2272)
T ss_pred H
Confidence 5
No 12
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.4e-69 Score=718.46 Aligned_cols=541 Identities=25% Similarity=0.344 Sum_probs=438.3
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCH
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1206)
.+.+|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999987422237999999999853 235789999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+|||.|+++++.+... . ..+....++++++.+||.+++|+.||+... +
T Consensus 854 ~E~L~~~a~l~~~~~~-------~------------------------~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-------S------------------------KSEKMEYVEEVIKLLEMESYADAVVGVPGE-G 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-------C------------------------HHHHHHHHHHHHHHcCChhhCCCeeCCCCC-C
Confidence 9999998876532110 0 011233578899999999999999997544 8
Q ss_pred CChhhhhHHHHHHHHhcCCc-cceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC-
Q 000971 324 ISGGERKRVTTGEMMVGPAL-ALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG- 401 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~-vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G- 401 (1206)
|||||||||+||++|+.+|+ ||||||||+|||+.++..+++.|+++++ .++|+|+++|||...+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999875 57899999999988888999999999997
Q ss_pred eEEEecCh----HHHHHHHHhcCC-CCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHH
Q 000971 402 QIVYQGPR----ELVLEFFESMGF-KCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISD 476 (1206)
Q Consensus 402 ~iv~~G~~----~~~~~~f~~~G~-~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 476 (1206)
+++|+|+. +++.+||+++|+ +||++.|||||+.++.+...... ..+++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876532110 01234555555544433322
Q ss_pred hh---cCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCcccc
Q 000971 477 EL---RTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTD 553 (1206)
Q Consensus 477 ~l---~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~ 553 (1206)
++ ..+...............|..+++.|++.+++|.++.++|++.+...|+++.+++|+++|++|++.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 22 111110000000112246889999999999999999999999999999999999999999999998753 234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcchh-hhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCc
Q 000971 554 GGIYAGALFFATAMVMFNGLAEISMTIAKLPV-FYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPN 632 (1206)
Q Consensus 554 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~v-f~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~ 632 (1206)
.+...|++|+.+++..+.....++..+..+++ |+|||..++|+.++|+++++++++|+.++.+++|.+++|||+|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 55677888887766555444445555666666 59999999999999999999999999999999999999999999988
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccc------------------cchhhHHHHHHhhCHHH
Q 000971 633 AGR-------FFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMS 687 (1206)
Q Consensus 633 ~~~-------ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~------------------~~i~~~~~W~~~isp~~ 687 (1206)
+.. ||.++++++++.+++.++..++++++++..+|..+ ++||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 765 99999999999999999999999999987766433 68999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccCC------------C----------------------Cc----cchhHHHhhccCcccchh
Q 000971 688 YAQNAIVANEFLGYSWKKFTP------------N----------------------SY----ESIGVQVLKSRGFFAHAY 729 (1206)
Q Consensus 688 y~~~al~~nef~~~~~~~~~~------------~----------------------~~----~~~g~~~L~~~~~~~~~~ 729 (1206)
|++++++.|||.+....|... | .+ ...|.++|..+++...
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~-- 1363 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYS-- 1363 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCccc--
Confidence 999999999999987665321 0 01 3578889998877554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000971 730 WYWLGLGALFGFILLFNLGFTMAITFL 756 (1206)
Q Consensus 730 ~~w~~~g~l~g~~~~f~~~~~l~l~~~ 756 (1206)
..|++++++++|++++ ++.++++.|.
T Consensus 1364 ~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1364 GRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred ccccchhhhhHHHHHH-HHHHHhhheE
Confidence 4699999999999888 6666667665
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.8e-67 Score=702.06 Aligned_cols=211 Identities=24% Similarity=0.311 Sum_probs=179.1
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 46999999999841 123599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+|+.++||||++.++.. |++|||.+.. .. .++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4567889999999999874 9999996531 11 234588999999887654 3445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999986 4566999999995
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 14
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1e-66 Score=608.40 Aligned_cols=474 Identities=27% Similarity=0.354 Sum_probs=368.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC-CCceeEEEECCeeCCCCCcc-------ceEEEecCCC-
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHDMGEFVPE-------RTAAYISQHD- 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~-~~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q~d- 235 (1206)
..+++||||.+.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.|+|.++.....+ +.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999976 45689999999977554432 5799999995
Q ss_pred -CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 236 -~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
.+.|-+||.+-+.=..+.++... ..++...+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 56787999998876655443211 12334567789999999987654
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
+.+.+.|||||||||.||+||+.+|++|++|||||+||..++.+|++.|+++.+ ..++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCe
Confidence 678899999999999999999999999999999999999999999999999876 4677788899999999999999
Q ss_pred EEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhh
Q 000971 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 474 (1206)
|+||++|++|+.|+.+++..- |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999988531 10 11100 00
Q ss_pred HHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccc
Q 000971 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1206)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~ 554 (1206)
..
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHH
Q 000971 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1206)
Q Consensus 555 ~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 634 (1206)
..|.....
T Consensus 257 ---------------------------a~p~~~~~--------------------------------------------- 264 (539)
T COG1123 257 ---------------------------AVPRLGDE--------------------------------------------- 264 (539)
T ss_pred ---------------------------hCCCcccc---------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccch
Q 000971 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESI 714 (1206)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~ 714 (1206)
...
T Consensus 265 ---------------------------------------------------------------------~~~-------- 267 (539)
T COG1123 265 ---------------------------------------------------------------------KII-------- 267 (539)
T ss_pred ---------------------------------------------------------------------ccc--------
Confidence 000
Q ss_pred hHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCC
Q 000971 715 GVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGED 794 (1206)
Q Consensus 715 g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1206)
+
T Consensus 268 -----------------~-------------------------------------------------------------- 268 (539)
T COG1123 268 -----------------R-------------------------------------------------------------- 268 (539)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred ccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEc
Q 000971 795 ISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMG 874 (1206)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G 874 (1206)
. ... .. .+ ...-++.+||+..|..+..+. . ...+...+++||||.+++||++||+|
T Consensus 269 ~-~~~------------~~--------~~-~~~ll~V~~l~k~y~~~~~~~-~-~~~~~~~Av~~VSf~l~~GE~lglVG 324 (539)
T COG1123 269 L-PRR------------GP--------LR-AEPLLSVRNLSKRYGSRKGLF-V-RERGEVKAVDDVSFDLREGETLGLVG 324 (539)
T ss_pred c-ccc------------cc--------cc-cCceeEeeeeeeeeccccccc-c-ccccceeeeeeeeeEecCCCEEEEEC
Confidence 0 000 00 00 011355666665554432111 0 01234579999999999999999999
Q ss_pred cCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC--Cc---ccccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCC
Q 000971 875 VSGAGKTTLMDVLSGRKTGGYITGNITISGYPK--KQ---ETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEV 947 (1206)
Q Consensus 875 ~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~ 947 (1206)
+||||||||.++|+|...+ .+|.|.++|.+. .. ...++.+-+|+|++. +.|.+||++.+.-....... .
T Consensus 325 eSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~ 400 (539)
T COG1123 325 ESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--G 400 (539)
T ss_pred CCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--c
Confidence 9999999999999998875 479999999762 11 224556788888764 68999999999765443332 2
Q ss_pred CHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000971 948 DSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1026 (1206)
Q Consensus 948 ~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~ 1026 (1206)
...+++++|.++++.++|.+ ..+++ +..||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++
T Consensus 401 ~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~l 475 (539)
T COG1123 401 SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDL 475 (539)
T ss_pred chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHH
Confidence 25667778999999999986 56666 4579999999999999999999999999999999999999999999999
Q ss_pred HhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1027 VDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1027 ~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
.++ |.|.|++|||.. -+...||||++|.+ |++|..|+.
T Consensus 476 q~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 476 QEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 866 999999999987 47789999999995 799999974
No 15
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.5e-67 Score=704.89 Aligned_cols=211 Identities=22% Similarity=0.282 Sum_probs=178.8
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+++|+. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 46999999999841 123599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.++||||++.+++. |++|||.+.. .. .++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 654 4567889999999999874 9999996531 12 234588999999887654 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999986 4566999999995
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++.+|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 799999985
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.3e-64 Score=673.25 Aligned_cols=217 Identities=18% Similarity=0.305 Sum_probs=180.9
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC------------
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------------ 894 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~------------ 894 (1206)
..++|+||+|+|+.. +..++|+||||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999999632 1236999999999999999999999999999999999976641
Q ss_pred ----------------------------------------eeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCH
Q 000971 895 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 895 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
+.+|+|.+||.++.. ..+++.+|||+|++.++. .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998654 457788999999999885 899
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~L 1004 (1206)
+|||.|+. + +.+ ++.++++++..++.+. .|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 1 222 2347888888887654 36667754 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCchHHHHhcCeEEEEecC---cE-EEEEcCC
Q 000971 1005 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRG---GQ-EIYVGPL 1066 (1206)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g---g~-~~~~g~~ 1066 (1206)
|||||+||+.+++.|++.|+++. ..|+|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 46789999999973 66 4578874
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=8.6e-65 Score=682.69 Aligned_cols=211 Identities=18% Similarity=0.221 Sum_probs=178.9
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEE
Confidence 469999999998521 13599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+|+.++||||++.+++. |++|||.... .. .++.++++++.+++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QY----SDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CC----CHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 754 4567889999999999875 9999995211 12 234588999999987654 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999986 4667899999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++.+|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 799999985
No 18
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-64 Score=622.97 Aligned_cols=487 Identities=22% Similarity=0.242 Sum_probs=353.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCC----------CCC------c-cce
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----------EFV------P-ERT 227 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~----------~~~------~-~~~ 227 (1206)
.++|+|||+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999997441 111 1 136
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHHhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 000971 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1206)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~Etl~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1206)
++||+|++ .+++.+||+||+.++.+.. +.. + .+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999987 6789999999999976432 110 0 011234667899
Q ss_pred HcCCcc---cccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 000971 305 VLGLEV---CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISL 381 (1206)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i 381 (1206)
.+||.+ ..+. .+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~-----~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSR-----YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhC-----CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999963 2343 445799999999999999999999999999999999999999999999986533 4556778
Q ss_pred ecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHH
Q 000971 382 LQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEF 461 (1206)
Q Consensus 382 ~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~ 461 (1206)
+|+..++.++||+|++|++|++++.|+++++.. -|.+....+ +
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~-----------------------------l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRA-----------------------------L 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhh-----------------------------h
Confidence 999999999999999999999999998776521 000000000 0
Q ss_pred HHHHHhchhhhhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHH
Q 000971 462 AEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLF 541 (1206)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f 541 (1206)
.... +
T Consensus 269 ~~~~---------------~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAAV---------------P------------------------------------------------------------ 273 (623)
T ss_pred hhcc---------------C------------------------------------------------------------
Confidence 0000 0
Q ss_pred hccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHh
Q 000971 542 LRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVF 621 (1206)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~ 621 (1206)
.. ..... +. .|
T Consensus 274 -~~----~~~~~------------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QL----GAMKG------------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -cc----ccccc------------------------------------cc-----------------CC-----------
Confidence 00 00000 00 00
Q ss_pred hhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCC
Q 000971 622 LTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGY 701 (1206)
Q Consensus 622 i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~ 701 (1206)
.
T Consensus 285 -------------------------------------------------------------------------------~ 285 (623)
T PRK10261 285 -------------------------------------------------------------------------------R 285 (623)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccccCCCCccchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeecccccccccccccc
Q 000971 702 SWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRG 781 (1206)
Q Consensus 702 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1206)
..... . ....
T Consensus 286 ~~~~~-------------~--------------------------------------~~~~------------------- 295 (623)
T PRK10261 286 RFPLI-------------S--------------------------------------LEHP------------------- 295 (623)
T ss_pred ccccc-------------c--------------------------------------cccc-------------------
Confidence 00000 0 0000
Q ss_pred ccccccCCCCCCCccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecce
Q 000971 782 TVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLS 861 (1206)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs 861 (1206)
. ...+. .... .. +.....+.++||++.++...... ........+|+|||
T Consensus 296 ~------------~~~~~---------~~~~--~~------~~~~~~L~~~~l~~~y~~~~~~~--~~~~~~~~~l~~vs 344 (623)
T PRK10261 296 A------------KQEPP---------IEQD--TV------VDGEPILQVRNLVTRFPLRSGLL--NRVTREVHAVEKVS 344 (623)
T ss_pred c------------ccCcc---------cccc--cc------cCCCceEEEeeeEEEEcCCCccc--cccCCceEEEeeeE
Confidence 0 00000 0000 00 00011378899988874210000 00001246999999
Q ss_pred eeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCC--CCCCCCCHHH
Q 000971 862 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND--IHSPFVTVYE 933 (1206)
Q Consensus 862 ~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~~Tv~e 933 (1206)
|+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++... .+++.++||+|++ .+++.+||.|
T Consensus 345 ~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~ 422 (623)
T PRK10261 345 FDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGD 422 (623)
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHH
Confidence 99999999999999999999999999998763 479999999865321 2355799999997 4788999999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000971 934 SLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1012 (1206)
Q Consensus 934 ~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD 1012 (1206)
++.+....+. ....++.++.+.++|+.+||. +..++.+ ..|||||||||+|||||+.+|+||||||||+|||
T Consensus 423 ~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD 495 (623)
T PRK10261 423 SIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALALNPKVIIADEAVSALD 495 (623)
T ss_pred HHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 9987643321 112344556789999999996 5666663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1013 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1013 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+.++..|++.|++++++ |.|||++||+++ .+...+|++++|.+ |++++.|+.
T Consensus 496 ~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 496 VSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999765 899999999987 57789999999985 799999975
No 19
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-64 Score=616.17 Aligned_cols=460 Identities=21% Similarity=0.294 Sum_probs=349.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+.+|+|||+.|++|++++|+|||||||||||++|+|.+++. ..+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999999861 128999999998865432 2569999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.|+........ .+ ..+....++.+++.+||++..+..++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------------------------------YDAMYLRAQKLLAQLKLDINPATPVG--- 142 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------------------------------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999998653211000 00 00112245678999999877776554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 143 --~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 143 --NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 45566688888999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|++++.|+.+++.. .+..+.
T Consensus 219 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 238 (506)
T PRK13549 219 GRHIGTRPAAGMTE--------------------------------------------DDIITM---------------- 238 (506)
T ss_pred CEEeeecccccCCH--------------------------------------------HHHHHH----------------
Confidence 99998886432100 000000
Q ss_pred CccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHH
Q 000971 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1206)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1206)
++... ..
T Consensus 239 ------------------------------------------------------------~~~~~-----~~-------- 245 (506)
T PRK13549 239 ------------------------------------------------------------MVGRE-----LT-------- 245 (506)
T ss_pred ------------------------------------------------------------hhCcC-----cc--------
Confidence 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHH
Q 000971 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1206)
Q Consensus 561 lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1206)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000971 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1206)
Q Consensus 641 l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1206)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCC
Q 000971 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1206)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1206)
. .. + . .
T Consensus 246 ------~---------------------------~~-~------------------------------------~--~-- 251 (506)
T PRK13549 246 ------A---------------------------LY-P------------------------------------R--E-- 251 (506)
T ss_pred ------c---------------------------cc-c------------------------------------c--c--
Confidence 0 00 0 0 0
Q ss_pred CccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcH
Q 000971 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1206)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGK 880 (1206)
.. .. + ...+.++|+++.++.. +++.+|+||||+|++|+++||+|||||||
T Consensus 252 ----------~~--~~--~------~~~l~~~~l~~~~~~~----------~~~~vl~~vsl~i~~Ge~~~l~G~NGsGK 301 (506)
T PRK13549 252 ----------PH--TI--G------EVILEVRNLTAWDPVN----------PHIKRVDDVSFSLRRGEILGIAGLVGAGR 301 (506)
T ss_pred ----------cc--CC--C------CceEEEecCccccccc----------cccccccceeeEEcCCcEEEEeCCCCCCH
Confidence 00 00 0 0125667776654210 12359999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHhhhhcCC--CCCCHHH
Q 000971 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLP--PEVDSET 951 (1206)
Q Consensus 881 STLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~~Tv~e~l~~~a~lr~~--~~~~~~~ 951 (1206)
|||+++|+|...+ +.+|+|.++|.++... ..++.+||++|++ .+++.+||.||+.+....... ...+.+.
T Consensus 302 STLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 380 (506)
T PRK13549 302 TELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA 380 (506)
T ss_pred HHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH
Confidence 9999999997642 1379999999765321 1244689999985 467889999999875321111 0112333
Q ss_pred HHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Q 000971 952 RKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1030 (1206)
Q Consensus 952 ~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g 1030 (1206)
..+.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++|
T Consensus 381 ~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g 455 (506)
T PRK13549 381 ELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQG 455 (506)
T ss_pred HHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCC
Confidence 446689999999996 5677764 4799999999999999999999999999999999999999999999998889
Q ss_pred CEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCc
Q 000971 1031 RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1206)
Q Consensus 1031 ~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~ 1068 (1206)
+|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 456 ~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 456 VAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred CEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999987 57889999999986 78888887653
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.7e-64 Score=613.36 Aligned_cols=450 Identities=21% Similarity=0.325 Sum_probs=346.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|+.|.+|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999987 9999999998754322 2469999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.|+..........+ ..+....++.+++.+||.+..+..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcCCCCCccCchh---
Confidence 999999998643211000000 00112235678999999887776655
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++..+||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 6999999999999999999999999999999999999999999998854 3 45566688888999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|+++..|+.+++.. ++..+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHH----------------
Confidence 99998775432100 000000
Q ss_pred CccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHH
Q 000971 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1206)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1206)
++...
T Consensus 237 ------------------------------------------------------------~~~~~--------------- 241 (501)
T PRK10762 237 ------------------------------------------------------------MVGRK--------------- 241 (501)
T ss_pred ------------------------------------------------------------hcCCC---------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHH
Q 000971 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1206)
Q Consensus 561 lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1206)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000971 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1206)
Q Consensus 641 l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1206)
.....
T Consensus 242 --------------------------------------------------------------~~~~~------------- 246 (501)
T PRK10762 242 --------------------------------------------------------------LEDQY------------- 246 (501)
T ss_pred --------------------------------------------------------------ccccc-------------
Confidence 00000
Q ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCC
Q 000971 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1206)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1206)
+ . .
T Consensus 247 -------------------------------------~-----------------------~------------~----- 249 (501)
T PRK10762 247 -------------------------------------P-----------------------R------------L----- 249 (501)
T ss_pred -------------------------------------c-----------------------c------------c-----
Confidence 0 0 0
Q ss_pred CccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcH
Q 000971 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1206)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGK 880 (1206)
.. . + .+..+.++|++. .+|+|+||+|++||++||+|||||||
T Consensus 250 ----------~~--~-------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGK 291 (501)
T PRK10762 250 ----------DK--A-------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGR 291 (501)
T ss_pred ----------cc--C-------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCH
Confidence 00 0 0 001355666541 26999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHhhhhcCC---CCCCHH
Q 000971 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLP---PEVDSE 950 (1206)
Q Consensus 881 STLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~~Tv~e~l~~~a~lr~~---~~~~~~ 950 (1206)
|||+++|+|...+ .+|+|.++|.++... ..++.+||++|++ .+++.+||.|++.+....... .....+
T Consensus 292 STLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 369 (501)
T PRK10762 292 TELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHA 369 (501)
T ss_pred HHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHH
Confidence 9999999998664 479999999765321 1345689999995 467889999999875321110 012223
Q ss_pred HHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000971 951 TRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1206)
Q Consensus 951 ~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1206)
+.++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++
T Consensus 370 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~ 444 (501)
T PRK10762 370 DEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444 (501)
T ss_pred HHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHC
Confidence 3455689999999995 5677764 479999999999999999999999999999999999999999999999878
Q ss_pred CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCc
Q 000971 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1206)
Q Consensus 1030 g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~ 1068 (1206)
|+|||++||++. .+...||++++|++ |++++.|+..+
T Consensus 445 g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 445 GLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred CCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 999999999987 57889999999985 78999888653
No 21
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-64 Score=616.71 Aligned_cols=458 Identities=21% Similarity=0.292 Sum_probs=347.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 45999999999999999999999999999999999999887 9999999998865432 2469999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++..... ..+.. +..+ ..+....++.+++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0000 00112346778999999887776654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++. . +++|+.++|+..++.++||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999865 3 45566688899999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|++++.|+++++.. ++..+.
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHH----------------
Confidence 99999887653210 000000
Q ss_pred CccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHH
Q 000971 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1206)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1206)
++.... . .
T Consensus 241 ------------------------------------------------------------~~~~~~--~---~------- 248 (510)
T PRK09700 241 ------------------------------------------------------------MVGREL--Q---N------- 248 (510)
T ss_pred ------------------------------------------------------------hcCCCc--c---c-------
Confidence 000000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHH
Q 000971 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1206)
Q Consensus 561 lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1206)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK09700 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000971 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1206)
Q Consensus 641 l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1206)
.+
T Consensus 249 --------------------------------------------------------~~---------------------- 250 (510)
T PRK09700 249 --------------------------------------------------------RF---------------------- 250 (510)
T ss_pred --------------------------------------------------------cc----------------------
Confidence 00
Q ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCC
Q 000971 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1206)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1206)
.. . .+.
T Consensus 251 -----~~-------------------------------~-------------------------------------~~~- 256 (510)
T PRK09700 251 -----NA-------------------------------M-------------------------------------KEN- 256 (510)
T ss_pred -----cc-------------------------------c-------------------------------------ccc-
Confidence 00 0 000
Q ss_pred CccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcH
Q 000971 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1206)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGK 880 (1206)
... .. .+..+.++|+++.+ ..+|+||||+|++|+++||+|||||||
T Consensus 257 ---------~~~--~~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK09700 257 ---------VSN--LA--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFAGLVGSGR 302 (510)
T ss_pred ---------ccc--CC--------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEECCCCCCH
Confidence 000 00 00136677776432 128999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecC---CCCCCCCCHHHHHHHhhhhc---CCC--C-C
Q 000971 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESLLYSAWLR---LPP--E-V 947 (1206)
Q Consensus 881 STLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~~Tv~e~l~~~a~lr---~~~--~-~ 947 (1206)
|||+++|+|...+ .+|+|.++|.++... ..++.+|||+|+ ..+++.+||+|++.+....+ ... . .
T Consensus 303 STLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 380 (510)
T PRK09700 303 TELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLF 380 (510)
T ss_pred HHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccccccccccccccc
Confidence 9999999998653 479999999765321 234568999998 45788899999998753211 000 0 1
Q ss_pred CHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000971 948 DSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1026 (1206)
Q Consensus 948 ~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~ 1026 (1206)
..+..++.++++++.++|. +..++.+ ..|||||||||.|||+|+.+|+||||||||+|||+.+...+++.|+++
T Consensus 381 ~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l 455 (510)
T PRK09700 381 HEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQL 455 (510)
T ss_pred ChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 1223335688999999996 6777764 479999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1027 VDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1027 ~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+++|.|||+++|++. .+...||++++|++ |++++.++.
T Consensus 456 ~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 456 ADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 888999999999987 57889999999986 688888764
No 22
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.1e-63 Score=667.11 Aligned_cols=211 Identities=23% Similarity=0.263 Sum_probs=179.1
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..|.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 46999999999852 123599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.. ..+++.+|||||++.++.. |++|||... ... .++.++++++.++|.+.. |+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~----sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEA----SSAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCC----CHHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4567899999999999874 999999531 112 234589999999997654 4555553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 977 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~-P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. .++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 467999999999999999996 89999999999999999999999999864 4799999999975 567899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++.+|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 799999985
No 23
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.7e-63 Score=662.31 Aligned_cols=210 Identities=20% Similarity=0.258 Sum_probs=178.4
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..+.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 47999999999852 12469999999999999999999999999999999999864 37999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.. ..+++.++||||++.+++ -|+||||.... +..++.++++++.++|.+.. |+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~-GTIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFS-GTFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCc-cCHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 346788999999999987 49999994321 12245689999999997643 444554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..+||||||||+||||||+++|+||+||||||+||..+...|++.|++.. .++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999975 4567999999986
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++.+|+.
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 24
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.1e-63 Score=611.61 Aligned_cols=464 Identities=22% Similarity=0.278 Sum_probs=346.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCCc-------cceEEEecCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d 235 (1206)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999862 1138999999998765421 24699999986
Q ss_pred C--CCCCCCHHHHHHHHhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--
Q 000971 236 N--HIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-- 310 (1206)
Q Consensus 236 ~--~~~~lTV~Etl~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1206)
. +++.+||.|++.+..... +.. . .+....++++++.+||.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988653211 100 0 011234677899999975
Q ss_pred -cccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHH
Q 000971 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1206)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1206)
..+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +.+|+.++|+...+.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 23544 44799999999999999999999999999999999999999999999986533 455666888888999
Q ss_pred hhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhch
Q 000971 390 DLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFH 469 (1206)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 469 (1206)
.+||+|++|++|++++.|+++++... |. .+ ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------HP--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------CH--------HH-------
Confidence 99999999999999999987654210 00 00 00
Q ss_pred hhhhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 000971 470 VGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKH 549 (1206)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~ 549 (1206)
+. ++....
T Consensus 254 -----------------------------------------~~----------------------------~~~~~~--- 261 (529)
T PRK15134 254 -----------------------------------------QK----------------------------LLNSEP--- 261 (529)
T ss_pred -----------------------------------------HH----------------------------HHHhCc---
Confidence 00 000000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccC
Q 000971 550 SLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGC 629 (1206)
Q Consensus 550 ~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl 629 (1206)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCC
Q 000971 630 DPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPN 709 (1206)
Q Consensus 630 ~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~ 709 (1206)
. .
T Consensus 262 ------------------------------------------------------------------------~---~--- 263 (529)
T PRK15134 262 ------------------------------------------------------------------------S---G--- 263 (529)
T ss_pred ------------------------------------------------------------------------c---c---
Confidence 0 0
Q ss_pred CccchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCC
Q 000971 710 SYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARG 789 (1206)
Q Consensus 710 ~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1206)
.+ .
T Consensus 264 -----------------------------------------------~~-----------------------~------- 266 (529)
T PRK15134 264 -----------------------------------------------DP-----------------------V------- 266 (529)
T ss_pred -----------------------------------------------cc-----------------------c-------
Confidence 00 0
Q ss_pred CCCCCccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeE
Q 000971 790 ESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVL 869 (1206)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~ 869 (1206)
. . . . .+ +..++++|+++.++.+.+. . +...+.+.+|+||||+|++|++
T Consensus 267 -----~--~------------~---~--~~------~~~l~~~~l~~~~~~~~~~-~-~~~~~~~~il~~isl~i~~Ge~ 314 (529)
T PRK15134 267 -----P--L------------P---E--PA------SPLLDVEQLQVAFPIRKGI-L-KRTVDHNVVVKNISFTLRPGET 314 (529)
T ss_pred -----c--c------------C---C--CC------CCcccccCcEEEeecCccc-c-ccccccceeeecceeEEcCCCE
Confidence 0 0 0 0 00 0024566676665311000 0 0000124699999999999999
Q ss_pred EEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCC--CCCCCCCHHHHHHHhhhh
Q 000971 870 TALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWL 941 (1206)
Q Consensus 870 ~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~l 941 (1206)
+||+||||||||||+++|+|... .+|+|.++|.++... .+++.+||++|++ .+++.+||.||+.+....
T Consensus 315 ~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~ 391 (529)
T PRK15134 315 LGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV 391 (529)
T ss_pred EEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh
Confidence 99999999999999999999763 379999999765321 1245689999996 477889999999886433
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHH
Q 000971 942 RLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1020 (1206)
Q Consensus 942 r~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~ 1020 (1206)
+.. ..+..+.++.+.++++.++|. +..++. +..|||||||||+||++|+.+|+||||||||+|||+.++..++
T Consensus 392 ~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~ 465 (529)
T PRK15134 392 HQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQIL 465 (529)
T ss_pred ccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHH
Confidence 211 122334456789999999997 466665 3579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1021 RTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1021 ~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+.|++++++ |+|||++||++. .+.+.+|++++|++ |+++..|+.
T Consensus 466 ~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 466 ALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999865 899999999987 57788999999986 688888874
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.4e-63 Score=608.95 Aligned_cols=445 Identities=23% Similarity=0.316 Sum_probs=342.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCC--CCCCCceeEEEECC-----------------------eeC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNG-----------------------HDM 219 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l--~~~~~~~G~I~~nG-----------------------~~~ 219 (1206)
+.+|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 566 89999972 221
Q ss_pred C-------CC------CccceEEEecCC-CCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHH
Q 000971 220 G-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYM 285 (1206)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~ 285 (1206)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 0 00 013468999997 678899999999998654322100
Q ss_pred HHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHH
Q 000971 286 KAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1206)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~ 365 (1206)
.+....++.+++.+||++..+..+ ..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 011234677899999987766554 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhh
Q 000971 366 LKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQY 445 (1206)
Q Consensus 366 L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~ 445 (1206)
|+++++.. +.+|+.++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~---------------------------- 261 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM---------------------------- 261 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH----------------------------
Confidence 99986533 4556668888889999999999999999998876543210000
Q ss_pred hcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHH
Q 000971 446 WTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIF 525 (1206)
Q Consensus 446 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~ 525 (1206)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHH
Q 000971 526 KLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSW 605 (1206)
Q Consensus 526 ~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~ 605 (1206)
. .. .
T Consensus 262 -----------------------~---~~------------------------------------------------~-- 265 (520)
T TIGR03269 262 -----------------------E---GV------------------------------------------------S-- 265 (520)
T ss_pred -----------------------h---hc------------------------------------------------h--
Confidence 0 00 0
Q ss_pred HHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCH
Q 000971 606 ILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSP 685 (1206)
Q Consensus 606 i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp 685 (1206)
+ +
T Consensus 266 ----~--------------------------------------------------------------~------------ 267 (520)
T TIGR03269 266 ----E--------------------------------------------------------------V------------ 267 (520)
T ss_pred ----h--------------------------------------------------------------h------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCccchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcce
Q 000971 686 MSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAV 765 (1206)
Q Consensus 686 ~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~ 765 (1206)
...
T Consensus 268 --------------------------------------------------------------------------~~~--- 270 (520)
T TIGR03269 268 --------------------------------------------------------------------------EKE--- 270 (520)
T ss_pred --------------------------------------------------------------------------ccc---
Confidence 000
Q ss_pred eeccccccccccccccccccccCCCCCCCccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhh
Q 000971 766 ITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMK 845 (1206)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~ 845 (1206)
. .. +. ....++++|+++.++..
T Consensus 271 ----------------~-----------~~-------------------~~--------~~~~l~~~~l~~~~~~~---- 292 (520)
T TIGR03269 271 ----------------C-----------EV-------------------EV--------GEPIIKVRNVSKRYISV---- 292 (520)
T ss_pred ----------------c-----------cc-------------------CC--------CCceEEEeccEEEeccC----
Confidence 0 00 00 00126778888776310
Q ss_pred hcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEc-Ccc---CCc------ccccce
Q 000971 846 LQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS-GYP---KKQ------ETFARI 915 (1206)
Q Consensus 846 ~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~~~~~~ 915 (1206)
..+.+.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++ |.+ ... ...++.
T Consensus 293 ----~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 366 (520)
T TIGR03269 293 ----DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDGRGRAKRY 366 (520)
T ss_pred ----CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhhHHHHhhh
Confidence 00124699999999999999999999999999999999998653 47999996 532 111 112456
Q ss_pred EEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-----ccccccCCCCCCCCCHHHHHHHH
Q 000971 916 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-----LIQSLVGLPGVSGLSTEQRKRLT 990 (1206)
Q Consensus 916 ~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~~g~~~~~~LSgGqrqrl~ 990 (1206)
+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++. +..|||||||||+
T Consensus 367 i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~ 437 (520)
T TIGR03269 367 IGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVA 437 (520)
T ss_pred EEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHH
Confidence 899999988889999999998753221 123334456889999999975 34555 3579999999999
Q ss_pred HHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 991 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 991 ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||+||+.+|+||||||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 438 laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 438 LAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999999999999765 899999999987 57788999999985 788888874
No 26
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.2e-63 Score=607.83 Aligned_cols=453 Identities=20% Similarity=0.263 Sum_probs=344.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2359999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.|..... + +....++.+++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853100 0 011235678899999877776654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++ . +.+|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 45666688998999999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|++++.|+++++... + ..+.+.
T Consensus 216 G~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~-------------- 237 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------D-----------------------------IIQAIT-------------- 237 (510)
T ss_pred CEEEEecChHHcCHH---------------H-----------------------------HHHHHh--------------
Confidence 999999987643110 0 000000
Q ss_pred CccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHH
Q 000971 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1206)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1206)
..... .....
T Consensus 238 --------------------------------------------------------------~~~~~-~~~~~------- 247 (510)
T PRK15439 238 --------------------------------------------------------------PAARE-KSLSA------- 247 (510)
T ss_pred --------------------------------------------------------------Ccccc-ccccc-------
Confidence 00000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHH
Q 000971 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1206)
Q Consensus 561 lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1206)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000971 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1206)
Q Consensus 641 l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1206)
.. ..
T Consensus 248 --------------------------------~~---------------------------~~----------------- 251 (510)
T PRK15439 248 --------------------------------SQ---------------------------KL----------------- 251 (510)
T ss_pred --------------------------------cc---------------------------cc-----------------
Confidence 00 00
Q ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCC
Q 000971 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1206)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1206)
...+ +. . .
T Consensus 252 ~~~~---------------------------------~~-----------------------------------~--~-- 259 (510)
T PRK15439 252 WLEL---------------------------------PG-----------------------------------N--R-- 259 (510)
T ss_pred cccc---------------------------------cc-----------------------------------c--c--
Confidence 0000 00 0 0
Q ss_pred CccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcH
Q 000971 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1206)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGK 880 (1206)
. .. . . .+.-+..+|++. .+|+||||+|++|+++||+|||||||
T Consensus 260 ---------~-~~-~--~------~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK15439 260 ---------R-QQ-A--A------GAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAGR 302 (510)
T ss_pred ---------c-cc-C--C------CCceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCCH
Confidence 0 00 0 0 011256666651 15899999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHhhhhcCCCCCCHHHHH
Q 000971 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLPPEVDSETRK 953 (1206)
Q Consensus 881 STLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~ 953 (1206)
|||+++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+..........+
T Consensus 303 STLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~ 380 (510)
T PRK15439 303 TELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN 380 (510)
T ss_pred HHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH
Confidence 9999999997653 379999999865321 1234689999984 477889999998642111111001122234
Q ss_pred HHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCE
Q 000971 954 MFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1032 (1206)
Q Consensus 954 ~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~t 1032 (1206)
+.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++|.|
T Consensus 381 ~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~t 455 (510)
T PRK15439 381 AVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVA 455 (510)
T ss_pred HHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCE
Confidence 5688999999997 6777764 579999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1033 VVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1033 vi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 456 iIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 456 VLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred EEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999997 58889999999985 7999888764
No 27
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.3e-63 Score=602.61 Aligned_cols=459 Identities=18% Similarity=0.262 Sum_probs=344.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|||+.+++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998761 128999999998865432 2469999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc-cccccCc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA-DTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 319 (1206)
+||+||+.|+........... ..+....++.+++.+||.+.. +..+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 001122456789999998654 3334
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++. . +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999864 3 4556668899999999999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000971 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~ 479 (1206)
+|++++.|+.+++.. ++..
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~----------------- 234 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDII----------------- 234 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHH-----------------
Confidence 999987664321000 0000
Q ss_pred CCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHH
Q 000971 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1206)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1206)
. .+.... .
T Consensus 235 ------------------------------------------------------~-----~~~~~~-----~-------- 242 (500)
T TIGR02633 235 ------------------------------------------------------T-----MMVGRE-----I-------- 242 (500)
T ss_pred ------------------------------------------------------H-----HHhCcc-----c--------
Confidence 0 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHH
Q 000971 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1206)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 639 (1206)
+
T Consensus 243 --------------------------------------------------~----------------------------- 243 (500)
T TIGR02633 243 --------------------------------------------------T----------------------------- 243 (500)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHh
Q 000971 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVL 719 (1206)
Q Consensus 640 ~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L 719 (1206)
.
T Consensus 244 --------------------------------------------------------------------~----------- 244 (500)
T TIGR02633 244 --------------------------------------------------------------------S----------- 244 (500)
T ss_pred --------------------------------------------------------------------c-----------
Confidence 0
Q ss_pred hccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCC
Q 000971 720 KSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRN 799 (1206)
Q Consensus 720 ~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1206)
. . +. .
T Consensus 245 ----~-------------------------------~-~~-----------------------------------~---- 249 (500)
T TIGR02633 245 ----L-------------------------------Y-PH-----------------------------------E---- 249 (500)
T ss_pred ----c-------------------------------c-cc-----------------------------------c----
Confidence 0 0 00 0
Q ss_pred CCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCc
Q 000971 800 SSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAG 879 (1206)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaG 879 (1206)
. . .. ....+.++|+++.+.. .+++.+|+||||+|++||++||+||||||
T Consensus 250 ----------~-~--~~--------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G~NGsG 298 (500)
T TIGR02633 250 ----------P-H--EI--------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAGLVGAG 298 (500)
T ss_pred ----------c-c--CC--------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeCCCCCC
Confidence 0 0 00 0012566777654410 01235899999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCC---CCCCCCCHHHHHHHhhh--hcCCCCCCHH
Q 000971 880 KTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLLYSAW--LRLPPEVDSE 950 (1206)
Q Consensus 880 KSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~~Tv~e~l~~~a~--lr~~~~~~~~ 950 (1206)
|||||++|+|...+ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.++.. ..........
T Consensus 299 KSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~ 377 (500)
T TIGR02633 299 RTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAA 377 (500)
T ss_pred HHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHH
Confidence 99999999998652 137999999976532 12345689999995 47888999999987532 1110112223
Q ss_pred HHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000971 951 TRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1206)
Q Consensus 951 ~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1206)
..++.++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++
T Consensus 378 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 452 (500)
T TIGR02633 378 AELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQE 452 (500)
T ss_pred HHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhC
Confidence 34566899999999964 566664 479999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1030 g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|.|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 453 g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 453 GVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred CCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 999999999987 57889999999985 688877754
No 28
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-63 Score=602.24 Aligned_cols=453 Identities=21% Similarity=0.299 Sum_probs=344.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999887 9999999998754322 3579999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++......+. . + ..+....++.+++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~----~----------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI----V----------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCC----C----------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch----
Confidence 999999998532100000 0 0 0011224567899999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++. . +++|+.++|+..++..+||+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998854 3 45566688888899999999999999
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000971 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1206)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 480 (1206)
|+++..++.... .+.++..+
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~----------------- 235 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQ----------------- 235 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHH-----------------
Confidence 999865421000 00000000
Q ss_pred CccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHHH
Q 000971 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1206)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1206)
.+... . .
T Consensus 236 -----------------------------------------------------------~~~~~----~-~--------- 242 (501)
T PRK11288 236 -----------------------------------------------------------AMVGR----E-I--------- 242 (501)
T ss_pred -----------------------------------------------------------HhcCC----C-c---------
Confidence 00000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHHH
Q 000971 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1206)
Q Consensus 561 lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1206)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000971 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1206)
Q Consensus 641 l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1206)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCCC
Q 000971 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1206)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1206)
... . . . .+
T Consensus 243 -----~~~---------------------------~-~------------------------------------~-~~-- 250 (501)
T PRK11288 243 -----GDI---------------------------Y-G------------------------------------Y-RP-- 250 (501)
T ss_pred -----ccc---------------------------c-c------------------------------------c-cc--
Confidence 000 0 0 0 00
Q ss_pred CccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcH
Q 000971 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1206)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGK 880 (1206)
. . ..+..++++|+++. .+++|+|++|++||++||+|||||||
T Consensus 251 -----------~--~--------~~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~~~iiG~NGsGK 292 (501)
T PRK11288 251 -----------R--P--------LGEVRLRLDGLKGP-----------------GLREPISFSVRAGEIVGLFGLVGAGR 292 (501)
T ss_pred -----------c--C--------CCCcEEEEeccccC-----------------CcccceeEEEeCCcEEEEEcCCCCCH
Confidence 0 0 00113566666521 38999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCC---CCCCCCCHHHHHHHhhhhcC-CCC--CCHH
Q 000971 881 TTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLLYSAWLRL-PPE--VDSE 950 (1206)
Q Consensus 881 STLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~~Tv~e~l~~~a~lr~-~~~--~~~~ 950 (1206)
|||+++|+|...+ .+|+|.++|.++.. ...++.++|++|++ .+++.+|+.|++.+...... +.. ....
T Consensus 293 STLlk~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 370 (501)
T PRK11288 293 SELMKLLYGATRR--TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNR 370 (501)
T ss_pred HHHHHHHcCCCcC--CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChH
Confidence 9999999998653 47999999976532 12245689999986 47888999999987532111 000 1122
Q ss_pred HHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000971 951 TRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1206)
Q Consensus 951 ~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1206)
..++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++
T Consensus 371 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 445 (501)
T PRK11288 371 WEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQ 445 (501)
T ss_pred HHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhC
Confidence 3345688999999994 6677764 479999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCcch
Q 000971 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHS 1070 (1206)
Q Consensus 1030 g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~~~ 1070 (1206)
|.|||++||++. ++.+.+|++++|++ |++++.|..++.+
T Consensus 446 g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 446 GVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred CCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 999999999987 58889999999985 7899999876543
No 29
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-63 Score=613.97 Aligned_cols=359 Identities=35% Similarity=0.620 Sum_probs=304.3
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEc
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITIS 903 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 903 (1206)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3457899999998865421 3478999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 904 GYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 904 g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
|++.....+++.+|||+|+|.++|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred cCCCcchhHHHHHHHhCCCcccCCCCCCccceeeeeeccc--hhhhc----CCCHHHHHhhcHHHHHHHH-HHHHhcCCC
Q 000971 1064 GPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASS--QEVAL----GVDFNDIFRCSELYRRNKA-LIEELSKPT 1136 (1206)
Q Consensus 1064 g~~~~~~~~~~~yf~~~~g~~~~~~~~npa~~~l~~~~~~--~~~~~----~~~~~~~~~~s~~~~~~~~-~~~~~~~~~ 1136 (1206)
|+. +++++||+++ |.| ||+++|||||++|+++.. .+... .......++......+... ....+...
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 996 6899999998 664 999999999999998853 11000 0001111110111111100 00011111
Q ss_pred CCCCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Q 000971 1137 PGSKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTLKEPR 1204 (1206)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~ 1204 (1206)
.+ .+....++||.||+.|++|.+++.+|+|.+...|+++.+++|+++|++||+++++..++++
T Consensus 326 ---~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~~~ 388 (613)
T KOG0061|consen 326 ---KK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGIQN 388 (613)
T ss_pred ---cc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHH
Confidence 11 1111278999999999999999999999999999999999999999999999988877654
No 30
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-61 Score=591.21 Aligned_cols=450 Identities=17% Similarity=0.264 Sum_probs=341.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 9999999998764322 3569999999888999
Q ss_pred CCHHHHHHHHhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 241 MTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
+||+||+.++.. ..+.. . + ..+....++.+++.+||.+..+..++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-- 133 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--V-------------------D-----------QDKMYRDTKAIFDELDIDIDPRAKVA-- 133 (491)
T ss_pred CCHHHHhhcccccccccc--c-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh--
Confidence 999999987532 11100 0 0 00011235678899999877766554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++. . +.+|+.++|+.+++..+||+|++|+
T Consensus 134 ---~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 134 ---TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ---hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 6999999999999999999999999999999999999999999999864 3 4456668888899999999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000971 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~ 479 (1206)
+|++++.|+++++.. ++..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876432100 000000
Q ss_pred CCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHH
Q 000971 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1206)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1206)
++.... .
T Consensus 230 -------------------------------------------------------------~~~~~~--~---------- 236 (491)
T PRK10982 230 -------------------------------------------------------------MVGRSL--T---------- 236 (491)
T ss_pred -------------------------------------------------------------HhCCCc--c----------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHH
Q 000971 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1206)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 639 (1206)
T Consensus 237 -------------------------------------------------------------------------------- 236 (491)
T PRK10982 237 -------------------------------------------------------------------------------- 236 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHh
Q 000971 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVL 719 (1206)
Q Consensus 640 ~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L 719 (1206)
..
T Consensus 237 -------------------------------------------------------------~~----------------- 238 (491)
T PRK10982 237 -------------------------------------------------------------QR----------------- 238 (491)
T ss_pred -------------------------------------------------------------cc-----------------
Confidence 00
Q ss_pred hccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCC
Q 000971 720 KSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRN 799 (1206)
Q Consensus 720 ~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1206)
. + . .
T Consensus 239 ------------------------------------~-~------------------------------------~--~- 242 (491)
T PRK10982 239 ------------------------------------F-P------------------------------------D--K- 242 (491)
T ss_pred ------------------------------------c-c------------------------------------c--c-
Confidence 0 0 0 0
Q ss_pred CCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCc
Q 000971 800 SSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAG 879 (1206)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaG 879 (1206)
.. . + .+..+.++|+++.. +.+|+|||+.+++||++||+||||||
T Consensus 243 -----------~~--~-------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~nGsG 286 (491)
T PRK10982 243 -----------EN--K-------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGLVGAK 286 (491)
T ss_pred -----------cC--C-------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEEecCCCCC
Confidence 00 0 0 01136777777641 14899999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCCC---CCCCCCHHHHHHHhhh--hcCCCC-CCH
Q 000971 880 KTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---HSPFVTVYESLLYSAW--LRLPPE-VDS 949 (1206)
Q Consensus 880 KSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~---~~~~~Tv~e~l~~~a~--lr~~~~-~~~ 949 (1206)
||||+++|+|...+ .+|+|.++|.++... ..++.+||++|+.. +++.+|+.++..+... ...... ...
T Consensus 287 KSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (491)
T PRK10982 287 RTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDN 364 (491)
T ss_pred HHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCc
Confidence 99999999998763 479999999765421 12445899999853 5778888777433210 000001 122
Q ss_pred HHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000971 950 ETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD 1028 (1206)
Q Consensus 950 ~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~ 1028 (1206)
...++.+.++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+++.+
T Consensus 365 ~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~ 439 (491)
T PRK10982 365 SRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAK 439 (491)
T ss_pred HHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHH
Confidence 33345688899999995 4556653 57999999999999999999999999999999999999999999999988
Q ss_pred CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1029 TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1029 ~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
+|.|||++||+++ ++.+.+|++++|++ |+++..++..
T Consensus 440 ~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 440 KDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred CCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 8999999999987 57889999999986 7888777654
No 31
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.8e-60 Score=581.00 Aligned_cols=447 Identities=20% Similarity=0.260 Sum_probs=329.5
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCC--C--
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNH--I-- 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~--~-- 238 (1206)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4999999999999999999999999999999999999987 9999999977643321 2458999997532 1
Q ss_pred ----CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 239 ----GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 239 ----~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
..+||+|++.+.. +....++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001235667899999887776
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ . +.+|+.++|+..++.++||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCCE
Confidence 655 6999999999999999999999999999999999999999999999865 3 44556678888899999999
Q ss_pred EEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhh
Q 000971 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 474 (1206)
|++|++|++++.|+++++.+- +.+ ..+ .
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~-------------------------~~~----~-------- 232 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALV-------------------------AQL----A-------- 232 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhh-------------------------hhh----h--------
Confidence 999999999999876643100 000 000 0
Q ss_pred HHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccc
Q 000971 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1206)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~ 554 (1206)
. . .....
T Consensus 233 -----------------------------------~---------------------------------~----~~~~~- 239 (490)
T PRK10938 233 -----------------------------------H---------------------------------S----EQLEG- 239 (490)
T ss_pred -----------------------------------h---------------------------------h----hccCc-
Confidence 0 0 00000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHH
Q 000971 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1206)
Q Consensus 555 ~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 634 (1206)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccch
Q 000971 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESI 714 (1206)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~ 714 (1206)
. . .+.
T Consensus 240 ------------------------------------------------------------------~--~-~~~------ 244 (490)
T PRK10938 240 ------------------------------------------------------------------V--Q-LPE------ 244 (490)
T ss_pred ------------------------------------------------------------------c--c-cCc------
Confidence 0 0 000
Q ss_pred hHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCC
Q 000971 715 GVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGED 794 (1206)
Q Consensus 715 g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1206)
. . . .
T Consensus 245 -------------------------------------------~---~-------------------~-----------~ 248 (490)
T PRK10938 245 -------------------------------------------P---D-------------------E-----------P 248 (490)
T ss_pred -------------------------------------------c---c-------------------c-----------c
Confidence 0 0 0 0
Q ss_pred ccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEc
Q 000971 795 ISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMG 874 (1206)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G 874 (1206)
. ... . . . .....++++|+++.++ ++.+|+||||.|++||++||+|
T Consensus 249 ~-~~~----------~-~--~--------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G 293 (490)
T PRK10938 249 S-ARH----------A-L--P--------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVG 293 (490)
T ss_pred c-ccc----------c-c--C--------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEEC
Confidence 0 000 0 0 0 0011378899988773 2459999999999999999999
Q ss_pred cCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCCCCCC--CCCHHHHHHHhhhh--cCCCC
Q 000971 875 VSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSP--FVTVYESLLYSAWL--RLPPE 946 (1206)
Q Consensus 875 ~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~--~~Tv~e~l~~~a~l--r~~~~ 946 (1206)
|||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.++. ..|+++++.+...- .....
T Consensus 294 ~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (490)
T PRK10938 294 PNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQA 372 (490)
T ss_pred CCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccC
Confidence 9999999999999996431 137999999976421 123456899999875543 35677766543210 11111
Q ss_pred CCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000971 947 VDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1025 (1206)
Q Consensus 947 ~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~ 1025 (1206)
.. ...++.++++++.++|.+ ..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++
T Consensus 373 ~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~ 446 (490)
T PRK10938 373 VS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDV 446 (490)
T ss_pred CC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHH
Confidence 11 223456899999999987 777764 57999999999999999999999999999999999999999999999
Q ss_pred HHhCC-CEEEEEecCCchHHHH-hcCeEEEEecCcEEEEEc
Q 000971 1026 TVDTG-RTVVCTIHQPGIDIFD-AFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 1026 ~~~~g-~tvi~~~H~p~~~i~~-~~d~v~ll~~gg~~~~~g 1064 (1206)
++++| .|||+++|+++ ++.+ .+|++++|++ |++++.-
T Consensus 447 l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 447 LISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred HHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEee
Confidence 98776 47999999986 4655 5899999986 5665543
No 32
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.7e-59 Score=507.87 Aligned_cols=470 Identities=25% Similarity=0.319 Sum_probs=368.9
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCC--CCCceeEEEECCeeCCCCCcc-------ceEEEecC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEFVPE-------RTAAYISQ 233 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~--~~~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q 233 (1206)
....++++|||.|++||.++|+|.||||||-..+++.|+++. ....+|+|.|+|.++-.+..+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999985 345689999999998655432 36999999
Q ss_pred CC--CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000971 234 HD--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVC 311 (1206)
Q Consensus 234 ~d--~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1206)
++ .+.|-.|+...|.-..+++...+ ..+++..+-++|+..|+.+-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~~---------------------------------~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGLS---------------------------------RAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhccc---------------------------------HHHHHHHHHHHHHHcCCCch
Confidence 96 56777788877776665542111 11234456778999999876
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000971 312 ADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL 391 (1206)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1206)
...+ +.++..|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++-.. -+-.++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5543 5678899999999999999999999999999999999999999999999998764 456677799999999999
Q ss_pred cCeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhh
Q 000971 392 FDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVG 471 (1206)
Q Consensus 392 fD~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 471 (1206)
+|+|+||.+|+++++|+.+.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998776521 1110 000
Q ss_pred hhhHHhhcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Q 000971 472 QKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSL 551 (1206)
Q Consensus 472 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~ 551 (1206)
|.++ ..
T Consensus 255 ---------------------------------------r~Ll----------------------------~a------- 260 (534)
T COG4172 255 ---------------------------------------RKLL----------------------------AA------- 260 (534)
T ss_pred ---------------------------------------HHHH----------------------------hc-------
Confidence 0000 00
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCC
Q 000971 552 TDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDP 631 (1206)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~ 631 (1206)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCc
Q 000971 632 NAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSY 711 (1206)
Q Consensus 632 ~~~~ff~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~ 711 (1206)
| +.
T Consensus 261 -----------------------------------------------------------------e---------P~--- 263 (534)
T COG4172 261 -----------------------------------------------------------------E---------PS--- 263 (534)
T ss_pred -----------------------------------------------------------------C---------CC---
Confidence 0 00
Q ss_pred cchhHHHhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCC
Q 000971 712 ESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGES 791 (1206)
Q Consensus 712 ~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1206)
T Consensus 264 -------------------------------------------------------------------------------- 263 (534)
T COG4172 264 -------------------------------------------------------------------------------- 263 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccCCCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEE
Q 000971 792 GEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTA 871 (1206)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~a 871 (1206)
..+ . ...+..|..++.+||...++.+.++-.. ..+...++++||++.++||.+|
T Consensus 264 ----g~~-------------~-------p~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gqTlG 317 (534)
T COG4172 264 ----GDP-------------P-------PLPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQTLG 317 (534)
T ss_pred ----CCC-------------C-------CCCCCCCceEEecceEEEEecCCccccc--cchheEEeccceeEecCCCeEE
Confidence 000 0 0000122345566665555544322111 1133579999999999999999
Q ss_pred EEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc------ccccceEEEeecCCC--CCCCCCHHHHHHHhhhhcC
Q 000971 872 LMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ------ETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRL 943 (1206)
Q Consensus 872 l~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~ 943 (1206)
|+|.||||||||-.+|.+...+ +|+|.++|.++.. ...++.+-.|+||+. +.|.+||.+-+.=+..+..
T Consensus 318 lVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~ 394 (534)
T COG4172 318 LVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHE 394 (534)
T ss_pred EEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcC
Confidence 9999999999999999987653 5999999998653 235678899999985 6799999998877665554
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHH
Q 000971 944 PPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1022 (1206)
Q Consensus 944 ~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~ 1022 (1206)
+ ..+..+++++|.++|+.+||++. .+++ +..+|||||||++|||||+-+|++++||||||+||-.-+..|+++
T Consensus 395 ~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~L 468 (534)
T COG4172 395 P-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDL 468 (534)
T ss_pred C-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHH
Confidence 4 46788999999999999999874 4444 568999999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1023 VRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1023 l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|+++.+ .|.+-++++||.. -+..+||+|++|++ |++|..|+.
T Consensus 469 Lr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 469 LRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999965 4999999999986 47789999999985 799999995
No 33
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.4e-58 Score=563.87 Aligned_cols=201 Identities=22% Similarity=0.303 Sum_probs=165.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 488999998773 24699999999999999999999999999999999998663 479999854 1
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHH
Q 000971 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 985 (1206)
..+||++|+. .+++.+||+|++.+....+. .... ...++++++.+++.+ ..++.+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 67788999999987643221 1111 123557899999964 456653 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE-EEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~-~~g 1064 (1206)
||||+||++|+.+|++|||||||+|||+.+...+++.|+++. | |||++||++. .+...||++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999987 5778899999998767766 455
Q ss_pred C
Q 000971 1065 P 1065 (1206)
Q Consensus 1065 ~ 1065 (1206)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-57 Score=560.80 Aligned_cols=198 Identities=18% Similarity=0.265 Sum_probs=165.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 489999998874 23599999999999999999999999999999999998653 4799999873
Q ss_pred CcccccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHH
Q 000971 908 KQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 984 (1206)
+.+||++|++. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 456799999986421 11 1 1134578999999994 5666664 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE-EE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~-~~ 1063 (1206)
||||++||++|+.+|+||||||||+|||+.+...+++.|+++ +.|||++||++. .+...+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999876 459999999987 57788999999996 5665 77
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 35
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3e-57 Score=558.93 Aligned_cols=201 Identities=20% Similarity=0.277 Sum_probs=164.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.+. ++.+|+|||+.|++|+++||+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECCc--
Confidence 488999998763 24699999999999999999999999999999999998653 4799998541
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHH
Q 000971 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 985 (1206)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987642211 1111 123567899999964 456653 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE-EEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~-~~g 1064 (1206)
||||+||++|+.+|++|||||||+|||+.+...+++.|+++. .|||++||++. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998767766 445
Q ss_pred C
Q 000971 1065 P 1065 (1206)
Q Consensus 1065 ~ 1065 (1206)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 36
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.2e-56 Score=545.40 Aligned_cols=211 Identities=20% Similarity=0.239 Sum_probs=173.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++ + ..|+++||+|++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 478889887663 1 258999999999999999999999999999999998663 47999885
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
..+||++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999874211 111 124688999999998888774 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |.|||+++||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 5778899999996 3 77777764
Q ss_pred Ccch---hHHHHHHHhC
Q 000971 1067 GRHS---CQLISYFEAI 1080 (1206)
Q Consensus 1067 ~~~~---~~~~~yf~~~ 1080 (1206)
.... ..+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 3221 2334566665
No 37
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-55 Score=545.12 Aligned_cols=197 Identities=21% Similarity=0.358 Sum_probs=161.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ ++.+|+||||.|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 488999998774 24699999999999999999999999999999999998653 4799998741
Q ss_pred CcccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHH
Q 000971 908 KQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgG 984 (1206)
..+||++|+. .+.+..|+.+++.. .. .......+.++|+.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~~------~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---LA------PQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---hC------chhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 11 1122346889999999963 566664 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE-EE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~-~~ 1063 (1206)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ .| |||++||++. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~g-tvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--EG-ALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CC-eEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 34 9999999986 57788999999986 6765 88
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 38
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.3e-54 Score=538.90 Aligned_cols=202 Identities=24% Similarity=0.333 Sum_probs=164.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ ++.+|+||||.|++|+++||+|||||||||||++|+|...+ .+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 488999998774 24699999999999999999999999999999999997653 4799988 4321
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHH
Q 000971 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGq 985 (1206)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5788899999998753211 111 1133578889999986 4566654 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe-cCcEEEEEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-RGGQEIYVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~-~gg~~~~~g 1064 (1206)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++||++. .+...+|++++|. +|.-+.|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 5778899999997 554455667
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 64
No 39
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=9e-57 Score=559.59 Aligned_cols=346 Identities=34% Similarity=0.559 Sum_probs=293.5
Q ss_pred ceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 000971 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 853 ~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987653 3579999999987655677889999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC-CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~-~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsg 1010 (1206)
+|||.|++.++.+...+.+++++.++++++.+||.+++|+.+|.++ .++|||||||||+||+||+.+|+||||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999888777778888899999999999999999999754 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCC
Q 000971 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGY 1090 (1206)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~ 1090 (1206)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|+|+. +++.+||+++ |. +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCCC
Confidence 999999999999999988899999999999888999999999998 5799999996 5789999998 55 599999
Q ss_pred CccceeeeeeccchhhhcC-----CCHHHHHhhcHHHHHHHHHHHHhcCCCCC---CCCCCCCCccCCcHHHHHHHHHHH
Q 000971 1091 NPATWMLEVTASSQEVALG-----VDFNDIFRCSELYRRNKALIEELSKPTPG---SKDLYFPTQYSQSAFTQFMACLWK 1162 (1206)
Q Consensus 1091 npa~~~l~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~r 1162 (1206)
|||||++|+++...+.... .++.+.|+.++.+++..+.+.....+.+. .......+.|..+|+.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 9999999998754322111 23455666665554433332211111111 111112346789999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcC
Q 000971 1163 QHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTLKEPRS 1205 (1206)
Q Consensus 1163 ~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 1205 (1206)
+++++||||.++.+|+++.+++|+++|++||+++++..+++++
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~~~~~~ 392 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQKGVQNI 392 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999988776653
No 40
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.2e-56 Score=553.66 Aligned_cols=368 Identities=27% Similarity=0.465 Sum_probs=290.3
Q ss_pred CCcEEEEEeeEEEEecchhh----------------hhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhc
Q 000971 825 EPHSLTFDEVVYSVDMPQEM----------------KLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLS 888 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~----------------~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~ 888 (1206)
.+.++.|.|++|.++..... +......+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 35789999999998754200 00011223567999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000971 889 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL 968 (1206)
Q Consensus 889 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 968 (1206)
|+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.+++++.++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999876533 345689999999999999999999999888766555666677889999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhc
Q 000971 969 IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAF 1048 (1206)
Q Consensus 969 ~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~ 1048 (1206)
+|+.+|....++||||||||++||+||+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999887778999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred CeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceeeeeeccchhhh-----cC----CCHHHHHhhc
Q 000971 1049 DELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVA-----LG----VDFNDIFRCS 1119 (1206)
Q Consensus 1049 d~v~ll~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~npa~~~l~~~~~~~~~~-----~~----~~~~~~~~~s 1119 (1206)
|++++|++ |+++|.|+. +++++||+++ |. +||+++|||||++|+++...... .. ....+.|+..
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 5899999998 55 59999999999999987532110 00 0122334321
Q ss_pred HHHHHHHHHHHHh--cC-CCC-----CCCCCC-CCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000971 1120 ELYRRNKALIEEL--SK-PTP-----GSKDLY-FPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGS 1190 (1206)
Q Consensus 1120 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1190 (1206)
. ..+....++.. .. ... ..+... ....+.++||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 001000 11235678999999999999988 99999999999999999999999
Q ss_pred HhccCCCCCCCCCc
Q 000971 1191 LFWDMGSKTLKEPR 1204 (1206)
Q Consensus 1191 ~f~~~~~~~~~~~~ 1204 (1206)
+||+++ ..++|+
T Consensus 426 lf~~~~--~~~~~~ 437 (659)
T PLN03211 426 MWWHSD--FRDVQD 437 (659)
T ss_pred HHhcCC--HHHHHH
Confidence 999985 344444
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-53 Score=494.54 Aligned_cols=449 Identities=22% Similarity=0.343 Sum_probs=349.9
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1206)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||.+.....++ .-|+.|.|+-.++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 4568999999999999999999999999999999999999998 99999999998766554 4589999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
|+|||.|||.++........ . + +..+.+..+..+|+.+|+....++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~g---~------------------i---------d~~~m~~~A~~~l~~lg~~~~~~~~v~- 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFG---L------------------I---------DRKAMRRRARELLARLGLDIDPDTLVG- 144 (500)
T ss_pred CCccHHHHhhcccccccCCC---c------------------c---------CHHHHHHHHHHHHHHcCCCCChhhhhh-
Confidence 99999999988654322100 0 0 011223456778999999755788887
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.||+||||-|.||+|+..+++|++|||||+.|+...+..+++.++++. ..+..|+.|+|..+|++++||+|.||
T Consensus 145 ----~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 145 ----DLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 499999999999999999999999999999999999999999999985 35777888999999999999999999
Q ss_pred cCCeEEEecCh-HHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHh
Q 000971 399 SDGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDE 477 (1206)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 477 (1206)
.||+++..++. .+. +.+++.+
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv~-------------- 240 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELVR-------------- 240 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHHH--------------
Confidence 99999877652 211 0000000
Q ss_pred hcCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhH
Q 000971 478 LRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1206)
Q Consensus 478 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1206)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHH
Q 000971 558 AGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFF 637 (1206)
Q Consensus 558 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 637 (1206)
.|+|-
T Consensus 241 -------------------------------------------------------------------~MvGr-------- 245 (500)
T COG1129 241 -------------------------------------------------------------------LMVGR-------- 245 (500)
T ss_pred -------------------------------------------------------------------HhhCc--------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHH
Q 000971 638 KQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQ 717 (1206)
Q Consensus 638 ~~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~ 717 (1206)
++. ..|
T Consensus 246 -----------------------------------------------------------~~~-~~~-------------- 251 (500)
T COG1129 246 -----------------------------------------------------------ELE-DLF-------------- 251 (500)
T ss_pred -----------------------------------------------------------chh-hhc--------------
Confidence 000 000
Q ss_pred HhhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccC
Q 000971 718 VLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISG 797 (1206)
Q Consensus 718 ~L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1206)
+
T Consensus 252 ----------------------------------------~--------------------------------------- 252 (500)
T COG1129 252 ----------------------------------------P--------------------------------------- 252 (500)
T ss_pred ----------------------------------------c---------------------------------------
Confidence 0
Q ss_pred CCCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCC
Q 000971 798 RNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSG 877 (1206)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sG 877 (1206)
. . . .. ...+..+++++++. ...++||||++++||++||-|-=|
T Consensus 253 -----------~-~-~-~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGiaGLvG 295 (500)
T COG1129 253 -----------E-P-P-EE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGIAGLVG 295 (500)
T ss_pred -----------c-c-c-cc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEEecccc
Confidence 0 0 0 00 00011244454431 125899999999999999999999
Q ss_pred CcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecC---CCCCCCCCHHHHHHHhhhhcCC-C-CCC
Q 000971 878 AGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESLLYSAWLRLP-P-EVD 948 (1206)
Q Consensus 878 aGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~~Tv~e~l~~~a~lr~~-~-~~~ 948 (1206)
||+|-|+++|.|... ..+|+|.+||.+.... ..+..++||+.+ +-++..++|.+|+.++...+.. . -++
T Consensus 296 aGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~ 373 (500)
T COG1129 296 AGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLID 373 (500)
T ss_pred CCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccC
Confidence 999999999999544 3479999999976432 345578999986 4568889999999887332322 1 245
Q ss_pred HHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000971 949 SETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV 1027 (1206)
Q Consensus 949 ~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~ 1027 (1206)
....++.+++..+.+++... .+.. +..||||.+|+|.|||.|..+|+||||||||.|+|.-+..+|.+++++++
T Consensus 374 ~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA 448 (500)
T COG1129 374 RRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELA 448 (500)
T ss_pred hHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHH
Confidence 56666788999999998743 2233 45799999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 1028 DTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 1028 ~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
++|.+||++|-+.. |+...||||++|++ |+++..
T Consensus 449 ~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e 482 (500)
T COG1129 449 AEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGE 482 (500)
T ss_pred HCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEE
Confidence 99999999999886 89999999999995 677653
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-51 Score=514.87 Aligned_cols=200 Identities=20% Similarity=0.283 Sum_probs=158.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ +++.+|+||||+|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 588999998873 123599999999999999999999999999999999998663 4799988752
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqr 986 (1206)
..+||++|+.. ..+++.++..+......+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 345666654322111111 111 245788999999974 55555 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE-EEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~-~~g~ 1065 (1206)
|||+||++|+.+|++|||||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 3 49999999987 57788999999985 6777 7775
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.3e-51 Score=488.31 Aligned_cols=498 Identities=25% Similarity=0.303 Sum_probs=334.5
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCH
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1206)
.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|.+.|+ +|+|...+ .-.++|++|+....+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 467999999999999999999999999999999999999988 99998764 2379999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHH---HH-HHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDV---YM-KAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~---~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+.+.-+... .++...+...... ..++++... +. .....++.+.+..+..+|..||+..- ++.++
T Consensus 84 ~~~v~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFGE-----LRELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhHH-----HHHHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 9999876431 1222222222111 122221111 11 11122334556778889999999876 66655
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.||||||.||++|++|+.+|++|+|||||++||..+..++-+.|++. .+ ++|.++|++..+-+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 69999999999999999999999999999999999999999988752 34 66669999999999999999999
Q ss_pred CCeE-EEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhh
Q 000971 400 DGQI-VYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDEL 478 (1206)
Q Consensus 400 ~G~i-v~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l 478 (1206)
.|++ .|.|.++...+- -.....++ ...++. ...++
T Consensus 225 ~g~l~~y~Gny~~~~~~--------------------r~~~~~~~------------------~~~~~~------~~~~~ 260 (530)
T COG0488 225 RGKLTPYKGNYSSYLEQ--------------------KAERLRQE------------------AAAYEK------QQKEL 260 (530)
T ss_pred CCceeEecCCHHHHHHH--------------------HHHHHHHH------------------HHHHHH------HHHHH
Confidence 9987 577876643321 00000000 000000 00000
Q ss_pred cCCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHH
Q 000971 479 RTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYA 558 (1206)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~ 558 (1206)
......+.| ... .. .. .
T Consensus 261 ------------------------~~~~~~i~r---------------~~~--------------~~---~~-~------ 277 (530)
T COG0488 261 ------------------------AKEQEWIRR---------------GKA--------------AA---SK-A------ 277 (530)
T ss_pred ------------------------HHHHHHHHH---------------HHh--------------cc---ch-H------
Confidence 000000000 000 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHH
Q 000971 559 GALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFK 638 (1206)
Q Consensus 559 g~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 638 (1206)
|+-
T Consensus 278 -----------------------------k~a------------------------------------------------ 280 (530)
T COG0488 278 -----------------------------KKA------------------------------------------------ 280 (530)
T ss_pred -----------------------------HHH------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHH
Q 000971 639 QYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQV 718 (1206)
Q Consensus 639 ~~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~ 718 (1206)
.+ ....
T Consensus 281 ------------~s--------------------------------------------------------------r~k~ 286 (530)
T COG0488 281 ------------KS--------------------------------------------------------------RIKR 286 (530)
T ss_pred ------------HH--------------------------------------------------------------HHHH
Confidence 00 0000
Q ss_pred hhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCC
Q 000971 719 LKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGR 798 (1206)
Q Consensus 719 L~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1206)
+.... .. ..-..+.. .. ... ....
T Consensus 287 l~k~~--~~-------------------------~~~~~~~~------------~~------~~~----------~~~f- 310 (530)
T COG0488 287 LEKLE--AR-------------------------LAEERPVE------------EG------KPL----------AFRF- 310 (530)
T ss_pred HHHHH--hh-------------------------hhhccccc------------cc------ccc----------eeec-
Confidence 00000 00 00000000 00 000 0000
Q ss_pred CCCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCC
Q 000971 799 NSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGA 878 (1206)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGa 878 (1206)
.. .. .+..+..+.++|+++.++ +++.+++++||.|.+|+.+||+||||+
T Consensus 311 ------------~~--~~-----~~~g~~vl~~~~~~~~y~------------~~~~l~~~~s~~i~~g~riaiiG~NG~ 359 (530)
T COG0488 311 ------------PP--PG-----KRLGKLVLEFENVSKGYD------------GGRLLLKDLSFRIDRGDRIAIVGPNGA 359 (530)
T ss_pred ------------cC--Cc-----ccCCCeeEEEeccccccC------------CCceeecCceEEecCCCEEEEECCCCC
Confidence 00 00 011234689999998874 225799999999999999999999999
Q ss_pred cHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHH
Q 000971 879 GKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIE 957 (1206)
Q Consensus 879 GKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~-~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~ 957 (1206)
||||||++|+|...+ .+|.|.+.-. -.+||..|+. .+.+..|+.|.+.-.. + +.. ...+.
T Consensus 360 GKSTLlk~l~g~~~~--~~G~v~~g~~--------v~igyf~Q~~~~l~~~~t~~d~l~~~~----~-~~~----e~~~r 420 (530)
T COG0488 360 GKSTLLKLLAGELGP--LSGTVKVGET--------VKIGYFDQHRDELDPDKTVLEELSEGF----P-DGD----EQEVR 420 (530)
T ss_pred CHHHHHHHHhhhccc--CCceEEeCCc--------eEEEEEEehhhhcCccCcHHHHHHhhC----c-ccc----HHHHH
Confidence 999999999996653 3788876431 2489999986 3347789999885321 1 111 45688
Q ss_pred HHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000971 958 EVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1036 (1206)
Q Consensus 958 ~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~ 1036 (1206)
..|..+++..- ..+. ++.||||||.||.+|+.++.+|.+|+|||||++||..+...+.+.|.+. ..|||+|
T Consensus 421 ~~L~~f~F~~~~~~~~-----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~V 492 (530)
T COG0488 421 AYLGRFGFTGEDQEKP-----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLV 492 (530)
T ss_pred HHHHHcCCChHHHhCc-----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEE
Confidence 89999999753 3333 4579999999999999999999999999999999999999999999875 4699999
Q ss_pred ecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 1037 IHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 1037 ~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||... +-..+++++++.+ +-..|.|.
T Consensus 493 SHDr~F-l~~va~~i~~~~~-~~~~~~g~ 519 (530)
T COG0488 493 SHDRYF-LDRVATRIWLVED-KVEEFEGG 519 (530)
T ss_pred eCCHHH-HHhhcceEEEEcC-ceeEcCCC
Confidence 999874 7788999999986 44455565
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.2e-49 Score=449.39 Aligned_cols=457 Identities=22% Similarity=0.311 Sum_probs=356.5
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHIG 239 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1206)
...+++|||+.|++||+.+|+|.|||||||||++|.|.+.|+ +|+|.++|+++.-..|+ --||+|.|+..++|
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 577999999999999999999999999999999999999998 99999999998766664 35899999999999
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
++||.||+..+..-... .+. + ..+....++.+.+.+||+--.|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~~-------------------~-----------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GLI-------------------D-----------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-ccc-------------------C-----------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987642110 000 0 012334577889999999888888875
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|++++. .+.+|+.|+|-..|+.+.||++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999875 35566669999999999999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000971 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~ 479 (1206)
.|+++-.-++. . ..+.+++++.
T Consensus 215 ~Gkvvgt~~~~----------------~---------------------------~~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDPV----------------A---------------------------ETTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecCC----------------C---------------------------CCCHHHHHHH---------------
Confidence 99986432100 0 0000110000
Q ss_pred CCccccccccccccccccccchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccchhHHH
Q 000971 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1206)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~l~~r~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1206)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCcChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccCCCcHHHHHHH
Q 000971 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1206)
Q Consensus 560 ~lff~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~a~~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 639 (1206)
|+|=
T Consensus 237 ------------------------------------------------------------------MvG~---------- 240 (501)
T COG3845 237 ------------------------------------------------------------------MVGR---------- 240 (501)
T ss_pred ------------------------------------------------------------------hcCC----------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhccccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHh
Q 000971 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVL 719 (1206)
Q Consensus 640 ~l~~~l~~~~~~~lf~~iaa~~~s~~~a~~~~~i~~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L 719 (1206)
++.
T Consensus 241 -----------------------------------------------------------------------------~v~ 243 (501)
T COG3845 241 -----------------------------------------------------------------------------EVV 243 (501)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred hccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCCccCCC
Q 000971 720 KSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRN 799 (1206)
Q Consensus 720 ~~~~~~~~~~~~w~~~g~l~g~~~~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1206)
. . .. ..
T Consensus 244 ----------------------------------------------~---------------~------------~~-~~ 249 (501)
T COG3845 244 ----------------------------------------------L---------------R------------VV-KP 249 (501)
T ss_pred ----------------------------------------------c---------------c------------cc-cC
Confidence 0 0 00 00
Q ss_pred CCccchhhhcccCCCCCCCCCcCCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCc
Q 000971 800 SSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAG 879 (1206)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaG 879 (1206)
+...+ +..+.++|++..-+. ....+++|||++++||++||.|..|-|
T Consensus 250 ---------------~~~pg------~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GNG 296 (501)
T COG3845 250 ---------------PSTPG------EVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGNG 296 (501)
T ss_pred ---------------CCCCC------CeEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCCC
Confidence 00000 224777877754321 235899999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCeeEEEEEEcCccC-C---cc-cccceEEEeecCCC---CCCCCCHHHHHHHhhhhc----CCCCC
Q 000971 880 KTTLMDVLSGRKTGGYITGNITISGYPK-K---QE-TFARISGYCEQNDI---HSPFVTVYESLLYSAWLR----LPPEV 947 (1206)
Q Consensus 880 KSTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~~-~~~~~~gyv~q~~~---~~~~~Tv~e~l~~~a~lr----~~~~~ 947 (1206)
-+.|+.+|+|.... .+|+|.++|.+. . .. ..+..+||||.+.. +.+.+|+.||+.+...-+ ...-.
T Consensus 297 Q~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l 374 (501)
T COG3845 297 QSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFL 374 (501)
T ss_pred HHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcccccccccccc
Confidence 99999999997643 259999999985 2 21 23346899999763 468899999998764321 11135
Q ss_pred CHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000971 948 DSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV 1027 (1206)
Q Consensus 948 ~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~ 1027 (1206)
+..+.+.+..++++.++....--.. ..+.||||++||+-+||||..+|++|++.+||-|||..+.+.|.+.|.+++
T Consensus 375 ~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r 450 (501)
T COG3845 375 DRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELR 450 (501)
T ss_pred CHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHH
Confidence 5677788899999999987322111 146899999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1028 DTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1028 ~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
+.|+.|++++-+.+ ++++.+|||.+|.+ |+++...+..
T Consensus 451 ~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 451 DAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred hcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999997 89999999999995 7888777654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-45 Score=373.91 Aligned_cols=214 Identities=26% Similarity=0.379 Sum_probs=190.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||+.++. ...+|+|||++|++||+++|+|||||||||||+||.++..+ .+|+|.++|.+..
T Consensus 3 i~i~~l~K~fg-------------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSFG-------------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEeC-------------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEecc
Confidence 67888887763 56899999999999999999999999999999999998764 4899999996542
Q ss_pred ----cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 ----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ----~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
-...|+.+|+|+|+..+||++||.||+.++-..- ...++++.++...++|+.+||.+.+|.+ +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2346788999999999999999999999874322 2456788888899999999999999998 4579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|||||+|||||+.+|+++++|||||+|||+...+|++.+++++++|.|+||+||.+.. ..+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6678999999985 7999999
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-43 Score=358.71 Aligned_cols=222 Identities=26% Similarity=0.418 Sum_probs=189.0
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC----CccceEEEecCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----VPERTAAYISQHDNHI 238 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~----~~~~~~~yv~Q~d~~~ 238 (1206)
...++|+|||+.|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 4578999999999999999999999999999999999999988 99999999766422 1257899999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
|++||.||+..+...- ... ...+++..+..+|+.+||.+.+|..
T Consensus 90 PHlTvleNv~lap~~v---------~~~------------------------~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 90 PHLTVLENVTLAPVKV---------KKL------------------------SKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred ccchHHHHHHhhhHHH---------cCC------------------------CHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 9999999999874311 001 1123455677899999999999855
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+..|||||||||+|||||+.+|+++++|||||+|||+...++.+.++++++ . +.|.+.++|....+-+.+|+|+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-e-GmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-c-CCeEEEEechhHHHHHhhheEEEe
Confidence 457999999999999999999999999999999999999999999999986 3 455555889999999999999999
Q ss_pred cCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHh
Q 000971 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1206)
++|+++..|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 456766667777654
No 47
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-42 Score=391.77 Aligned_cols=224 Identities=29% Similarity=0.423 Sum_probs=194.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||+..+. .++.+|+||||+|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 356778876663 136799999999999999999999999999999999998774 589999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ..+++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+..+.. +++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHH
Confidence 54 3567789999999999999999999999999986542 44566799999999999866555 45799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||+||+||+++|+||||||||+|||+.++..+++.|++++++| +|||++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999997 78888999999985 7999999
Q ss_pred CCCcchhHHHHHHHh
Q 000971 1065 PLGRHSCQLISYFEA 1079 (1206)
Q Consensus 1065 ~~~~~~~~~~~yf~~ 1079 (1206)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 75 244444443
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-43 Score=375.35 Aligned_cols=219 Identities=23% Similarity=0.318 Sum_probs=193.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.+++|+..+... ..+...+|+|||+.|++||++||+|.||||||||++++.++..| .+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 5788888665421 11245799999999999999999999999999999999998764 4899999997653
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
. ..+|+.+|+++|+..++...||+||+.|...+.. .++++.+++|.++|+.+||.+.++++ +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 2357889999999999999999999999876653 67889999999999999999999988 46899
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
|||||||+|||||+.+|+||++|||||+|||.+...|++.|+++.++ |.||+++||+++ -+-+.||||.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999766 999999999987 37789999999995 7999
Q ss_pred EEcCCC
Q 000971 1062 YVGPLG 1067 (1206)
Q Consensus 1062 ~~g~~~ 1067 (1206)
..|++.
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999974
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-42 Score=359.90 Aligned_cols=231 Identities=26% Similarity=0.377 Sum_probs=200.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+++++|+.++ +.+.|++||+++|++||+++||||||+||||||++|.|...+ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 58899998765 457899999999999999999999999999999999998875 489999999886
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCC
Q 000971 908 KQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSG 980 (1206)
Q Consensus 908 ~~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~ 980 (1206)
.+ ...++++|+++|+-.+|..+||+||+.|. +|.....+++..++.+..-|+.+||... ++.. ++.
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 13567899999999999999999999986 3444566778888889999999999987 6666 568
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
|||||+||++|||||+.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.. +++..+||+++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999997 68999999999995 79
Q ss_pred EEEEcCCCcc----hhHHHHHHHhCCC
Q 000971 1060 EIYVGPLGRH----SCQLISYFEAIPG 1082 (1206)
Q Consensus 1060 ~~~~g~~~~~----~~~~~~yf~~~~g 1082 (1206)
++..|++.+- -.-+.+||.+..+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999997421 1134467776543
No 50
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=365.98 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=182.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++++++.+. ...+|+|||++|.+||+++|+||||||||||||+|+|..++ .+|+|.++|.++
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 467888888774 25799999999999999999999999999999999998774 489999999987
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
.. ....+|||+|++.++|..||+||+.|+..++. .+++++++.+.+.|+.+||.+..+++ +..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 24568999999999999999999999876653 45566777899999999999999998 4689999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
||+|||||+.+|+||+||||.++||+.++..+++.|.++.+ +++|||++|||.+ |...++|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999875 4899999999997 678889999999864
No 51
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.3e-42 Score=388.48 Aligned_cols=201 Identities=20% Similarity=0.263 Sum_probs=155.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.|+||+|.++. +..++++++|-+.+++.+|+|||||+||||||+++.|...+ ..|.|.-.-+.
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 5889999988752 22589999999999999999999999999999999997763 36766433221
Q ss_pred CcccccceEEEeecC--CCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQETFARISGYCEQN--DIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~--~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.+++..|. +.+.-..++-|+++=. . ..+.+.+.+..+|..+||+...+... .+.||+||
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~----~----~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~Gq 514 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPK----F----PDEKELEEMRSILGRFGLTGDAQVVP----MSQLSDGQ 514 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHh----c----cccchHHHHHHHHHHhCCCccccccc----hhhccccc
Confidence 22333343 2233345666766421 0 11334566889999999995443331 46899999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|+||.+|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++||... |-+.++++.+..+++...+.|.
T Consensus 515 r~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G~ 590 (614)
T KOG0927|consen 515 RRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDGD 590 (614)
T ss_pred chhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCcc
Confidence 99999999999999999999999999999999988888764 4589999999874 7788999999999999999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 591 i 591 (614)
T KOG0927|consen 591 I 591 (614)
T ss_pred H
Confidence 4
No 52
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-42 Score=368.86 Aligned_cols=217 Identities=26% Similarity=0.411 Sum_probs=185.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|++++|+. + .+|+||||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 5889999999851 2 599999999999999999999999999999999997663 489999999886
Q ss_pred CcccccceEEEeecCCCC--CCCCCHHHHHHHhhhhcCC--CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQETFARISGYCEQNDIH--SPFVTVYESLLYSAWLRLP--PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~--~~~~Tv~e~l~~~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.+..-+..+|||||...+ ...+||+|-+..+..-+.. .... ++.++.|+++|+.+|+.+++|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654334679999996533 2238999999876433321 1122 3336789999999999999999976 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||+||+.|||||+.+|++|+|||||+|+|+.++..++++|++++++|+|||+++||++ .+.+.||+|+.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999989999999999998 5899999999997 489999
Q ss_pred cCCCc
Q 000971 1064 GPLGR 1068 (1206)
Q Consensus 1064 g~~~~ 1068 (1206)
|++.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99753
No 53
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.8e-42 Score=371.25 Aligned_cols=218 Identities=28% Similarity=0.395 Sum_probs=189.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++.+|+++.|+ ++.+|+||||++++|++++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 368899999885 45799999999999999999999999999999999997663 479999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCC-CCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-VDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.+|||||.......+||+|.+.++..-+.... ...++.++.|+++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 4567889999999988889999999998754322211 123344457999999999999999985 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||+.|||||+++|+||+||||||+||...+..|+++++++++ +|+|||+++||++. ...+||++++|++ |++++
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999985 49999999999984 7889999999985 79999
Q ss_pred EcCCC
Q 000971 1063 VGPLG 1067 (1206)
Q Consensus 1063 ~g~~~ 1067 (1206)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99974
No 54
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.1e-41 Score=359.42 Aligned_cols=208 Identities=28% Similarity=0.408 Sum_probs=175.6
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
..+||+-.+.... ....+|++||+.|++||++||||||||||||||++|.|...+ .+|.|.++|.+...
T Consensus 3 ~~~~v~k~y~~~~---------~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~ 71 (226)
T COG1136 3 ELKNVSKIYGLGG---------EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTK 71 (226)
T ss_pred EEeeeEEEeccCC---------cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCc
Confidence 4677776554321 125799999999999999999999999999999999998775 48999999976532
Q ss_pred ------cc-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccc-cccCCCCCCCC
Q 000971 910 ------ET-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ-SLVGLPGVSGL 981 (1206)
Q Consensus 910 ------~~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~~g~~~~~~L 981 (1206)
.. .++.+|||+|+..+.|++||.||+.+...+... .....++.++++++.+||.+..+ .. +..|
T Consensus 72 l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eL 143 (226)
T COG1136 72 LSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSEL 143 (226)
T ss_pred CCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhc
Confidence 12 345799999999999999999999987655432 22256677899999999997666 54 4579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 982 SgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
||||||||+|||||+.+|+||+.||||.+||+.++..|++++++++++ |+|||++||+|. +...|||++.|.+|+
T Consensus 144 SGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~--lA~~~dr~i~l~dG~ 219 (226)
T COG1136 144 SGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPE--LAKYADRVIELKDGK 219 (226)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHhCCEEEEEeCCe
Confidence 999999999999999999999999999999999999999999999866 999999999974 788999999999754
No 55
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-42 Score=357.42 Aligned_cols=213 Identities=25% Similarity=0.361 Sum_probs=191.5
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++|+||+..|. .+.+++|+|++|++||++.++|||||||||+|++|.+...+ .+|+|+|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 57888887663 45799999999999999999999999999999999998874 4899999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc--ccccccCCCCCCCCCH
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSg 983 (1206)
. ...||.+|||-|+-.++|++||.||+.+--.+. ..++++.+++++|+|+++||.+ +.+++ +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 346889999999999999999999998765554 4678888999999999999985 77877 568999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||+|||.+||||+++|+||+||||.++|||.++..+++.++++.++ |+|||++|||.. |.+.+.|||++|+ +|+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999998765 999999999997 7899999999998 579988
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8875
No 56
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=348.65 Aligned_cols=201 Identities=27% Similarity=0.388 Sum_probs=184.9
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
.++++||||.++.||++||+|+|||||||+|++|++...+ .+|.|.+||.+... ...++.+|.++.+-.++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3589999999999999999999999999999999998774 48999999998543 4567889999988889999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
+|||.|.+.+. +....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 45567778899999999999999999976 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1012 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|..+...+.+.++++.++|++||+++|.++ ++.+.||++++|++ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999989999999999997 78889999999997 799999986
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=352.60 Aligned_cols=221 Identities=26% Similarity=0.325 Sum_probs=188.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||+-.|+ +++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.++|..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478899987764 35689999999999999999999999999999999999766 3489999999754
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-----CCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 000971 908 KQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLVGLP 976 (1206)
Q Consensus 908 ~~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 976 (1206)
.. ..+++.+||++|++.+.+.++|.+|++.+..-+.+ -....++.+..+-++|+.+|+.+.+-+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34678899999999999999999999876432221 12333445566788999999999888774
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
..|||||+|||+|||||+.+|+||+.|||+++|||.++..||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 479999999999999999999999999999999999999999999999754 9999999999874 568999999998
Q ss_pred cCcEEEEEcCCCcc
Q 000971 1056 RGGQEIYVGPLGRH 1069 (1206)
Q Consensus 1056 ~gg~~~~~g~~~~~ 1069 (1206)
. |+++|.||..+-
T Consensus 223 ~-G~ivfDg~~~el 235 (258)
T COG3638 223 A-GRIVFDGPASEL 235 (258)
T ss_pred C-CcEEEeCChhhh
Confidence 5 799999997643
No 58
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.8e-41 Score=335.90 Aligned_cols=213 Identities=25% Similarity=0.331 Sum_probs=184.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.|+||+..|+. ...+|+||||.|++||++-|+|||||||||||++|.+...+ ..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~p--t~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERP--TRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcC--CCceEEECCeecc
Confidence 578888877652 35699999999999999999999999999999999996653 4799999999864
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
. ...+|.+|+|+|+..+.+..||+||+.|...+. ..+.++.+++|.++|+.+||.+.++.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 235789999999999999999999999986655 345667788899999999999999887 46899
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||+||++||||++.+|++|+.||||-+||+..+..||+++.++...|.|||+.||+.+. +-.+-.|++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999999999999999542 3445568888885 68776
Q ss_pred EcC
Q 000971 1063 VGP 1065 (1206)
Q Consensus 1063 ~g~ 1065 (1206)
...
T Consensus 218 d~~ 220 (223)
T COG2884 218 DES 220 (223)
T ss_pred ccc
Confidence 554
No 59
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-41 Score=359.29 Aligned_cols=225 Identities=28% Similarity=0.361 Sum_probs=196.1
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~ 236 (1206)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..+.. ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4577999999999999999999999999999999999999998 9999999998876653 468999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
++...||.||+.|..+..+.. ..+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998776531 113455688899999999888754
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|.+.|+++.... +.||+.++|-++-+-+.||+|.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 55799999999999999999999999999999999999999999999987755 5666668899999999999999
Q ss_pred EEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhcC
Q 000971 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTS 438 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s 438 (1206)
||++|++++.|+..++ |..|.+.-...|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999987 455766666677665543
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-41 Score=358.78 Aligned_cols=205 Identities=28% Similarity=0.442 Sum_probs=185.8
Q ss_pred ceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCc---cCCc-ccccceEEEeecCCCCCCC
Q 000971 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 928 (1206)
Q Consensus 853 ~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~q~~~~~~~ 928 (1206)
...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +..+ ....|.+|||+|+..++++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 45689999999999999999999999999999999998875 4899999998 5444 3345789999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPT 1008 (1206)
|||.+|+.|+..++ ...++..+.+.+|.|+|+.++|++.++++ +..|||||||||++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 34456677888999999999999999998 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1009 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
++||+.-+..+.+.|+++.++ |.|+|++|||+. ++++.+|||++|++ |++...|+..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999997 89999999999996 7888888863
No 61
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=372.06 Aligned_cols=214 Identities=27% Similarity=0.405 Sum_probs=193.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||+..+. ...+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~--~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEP--TSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 478888887763 22299999999999999999999999999999999998774 589999999987
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
+. ....|.+++|+|+..+||+|||+||+.|+.+++ ..++++.+++|+++.+.++|.++.|++ ++.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 345688999999999999999999999997766 346778889999999999999999998 468999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+++|++++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. |...++||+++|+ .|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999985 8899999999999 589999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 62
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.8e-40 Score=372.58 Aligned_cols=212 Identities=33% Similarity=0.469 Sum_probs=184.8
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC--CccceEEEecCCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--VPERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1206)
.+.+|+|||+.|++|++++++||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 478999999999999999999999999999999999999997 99999999988653 2356899999999999999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+|||.|.+++.+.... .....++++++.+||++..+. .+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~-----~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANK-----KV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCc-----ch
Confidence 999999999988764210 112357889999999985444 44
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999864 4356666788889999999999999999
Q ss_pred eEEEecChHHHHHHHHh
Q 000971 402 QIVYQGPRELVLEFFES 418 (1206)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1206)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999987766543
No 63
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=372.32 Aligned_cols=217 Identities=31% Similarity=0.435 Sum_probs=194.0
Q ss_pred EeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc-ceEEEecCCCCCCCCCCHHH
Q 000971 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1206)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1206)
+|+|+|+.|++||+++|+|||||||||||++|||+.+++ +|+|.++|.+++..+|. |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998875 88999999999999999999
Q ss_pred HHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCC
Q 000971 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1206)
Q Consensus 246 tl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1206)
|+.|+.+.++.. ..+.+.+++++.+.|+|++..|.. ++.||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 999998876531 113455678899999999998865 45799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000971 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1206)
Q Consensus 326 GGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1206)
|||||||++||||+.+|++++||||+|.||+..+..+...|+++-+ .-+++++.++|+..|+..++|+|.+|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999988644 456777779999999999999999999999999
Q ss_pred ecChHHHHHHHHhcCCCCCCCCChhHHHH
Q 000971 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1206)
Q Consensus 406 ~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1206)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4677777777753
No 64
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=338.59 Aligned_cols=218 Identities=22% Similarity=0.316 Sum_probs=188.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCC---CCCeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 904 (1206)
.++.+|++++|. .+++|+|||+.|+++++|||||||||||||||++|-+.. .+-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578899998874 457999999999999999999999999999999998743 3346789999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ..+|+.+|.|+|.+..+| +|++||+.|+.++..-.+ ++.++.|++.|+...|++-........ ..
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-a~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-AL 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC-cc
Confidence 87643 346888999999999999 999999999987764332 677889999999999987544333322 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
+|||||+|||||||||+.+|+||+||||||+|||.+...|-+++.+|+ +.-|||++||.+. ......|+...+.. |+
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~ 225 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GE 225 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cE
Confidence 799999999999999999999999999999999999999999999997 4699999999997 57788999999986 79
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+|.+|+.
T Consensus 226 LvE~g~T 232 (253)
T COG1117 226 LVEFGPT 232 (253)
T ss_pred EEEEcCH
Confidence 9999986
No 65
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=373.80 Aligned_cols=216 Identities=26% Similarity=0.382 Sum_probs=193.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||+..+. ...+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 588999887663 46799999999999999999999999999999999998874 489999999987
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
... ..+|.+|+|+|+..+||+|||+||+.|+..++ ....+++.+++|+++++.++|.+++++. +..|||||+
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 653 35788999999999999999999999997643 3345667888999999999999999988 467999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|++|+||||.|+||..-+..++.-|+++.++ |.|.|++|||.. +.+.++|||++|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998755 999999999987 78899999999985 79998888
Q ss_pred CC
Q 000971 1066 LG 1067 (1206)
Q Consensus 1066 ~~ 1067 (1206)
+.
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 63
No 66
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.7e-39 Score=370.83 Aligned_cols=214 Identities=28% Similarity=0.409 Sum_probs=188.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.+. .+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 588999998774 24699999999999999999999999999999999998764 489999999886
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. .+..+...+++++++.++|.+..++.+ +.||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2346779999999999999999999998765542 233444567889999999998888875 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999997 68889999999986 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 67
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=353.30 Aligned_cols=223 Identities=29% Similarity=0.454 Sum_probs=188.8
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCe---eCCCCCc-cceEEEecCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH---DMGEFVP-ERTAAYISQHDNHI 238 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~---~~~~~~~-~~~~~yv~Q~d~~~ 238 (1206)
....+++|||+.|+.||+++++|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.||||+|+-.+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3466899999999999999999999999999999999999998 999999999 6555443 37899999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
++|||.||+.|+.+++.. + |+ ..+.+..+.++|+.+.|++.++
T Consensus 90 ~HmtVa~NIAFGl~~~~~--~-----------------p~-------------~~~~r~rv~elL~lvqL~~la~----- 132 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE--R-----------------PS-------------EAEIRARVEELLRLVQLEGLAD----- 132 (345)
T ss_pred ccchHHhhhhhccccccc--C-----------------CC-------------hhhHHHHHHHHHHHhcccchhh-----
Confidence 999999999999877521 0 10 0123446788899999987665
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+++..|||||||||++||||+-.|+||+||||+++||...+..+-+.|+++.... +.+.+.++|+.+|++++||+|++|
T Consensus 133 ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl 211 (345)
T COG1118 133 RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVL 211 (345)
T ss_pred cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEe
Confidence 5677899999999999999999999999999999999999999999999976544 455556899999999999999999
Q ss_pred cCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHH
Q 000971 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1206)
++|+|...||++++. ..|...-+..|+-
T Consensus 212 ~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G 239 (345)
T COG1118 212 NQGRIEQVGPPDEVY--------DHPASRFVARFLG 239 (345)
T ss_pred cCCeeeeeCCHHHHh--------cCCCccceecccc
Confidence 999999999999984 3455555555543
No 68
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-40 Score=342.48 Aligned_cols=210 Identities=26% Similarity=0.394 Sum_probs=185.1
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1206)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+.+. ++.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 9999999999987665 5889999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||.||+.+--.+++.. .++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999999876655421 12345568999999999752 123467
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
++.|||||+|||.+||||+.+|+|++||||+++||+-++.++.+-++++-+.. ++||+.++|+..|++.++|+|++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecC
Confidence 78999999999999999999999999999999999999999999888876554 45566689999999999999999999
Q ss_pred CeEEEecChHHHHH
Q 000971 401 GQIVYQGPRELVLE 414 (1206)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1206)
|+++.++++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999864
No 69
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-40 Score=371.58 Aligned_cols=223 Identities=31% Similarity=0.429 Sum_probs=197.7
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc-ceEEEecCCCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~~~~~lT 242 (1206)
...+|+|+|+.|++||+++++|||||||||||++|||+..|+ +|+|.++|.+++..++. |.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999998 99999999999998875 78999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|+.+.++... ..+.+.+++++|+.++|++.++.. +.
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~R~-----p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFADRK-----PH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhhhC-----hh
Confidence 9999999987433111 012345688899999999877654 55
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||+|||++||||+.+|++||||||.|+||..-+.++..-|+++.+.. +.+.|.++|+..|++.+.|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 799999999999999999999999999999999999999999999987765 6666778999999999999999999999
Q ss_pred EEEecChHHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000971 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1206)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v 436 (1206)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578777888887653
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=345.01 Aligned_cols=192 Identities=26% Similarity=0.376 Sum_probs=169.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
..+|+|||+.|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 67999999999999999999999999999999999999998 999999999883 4567899999999999999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.|+...++... .+....++.+|+.+||.+..|. ++..|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDK-----YPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhc-----Ccccc
Confidence 99999987654211 1122357889999999998875 45679
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
||||||||+|||||+.+|+||+||||+++||+.|+.++.+.|.++.+.. +.+|+.++|+.+|+..++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999988887754 456666899999999999999999984
No 71
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.3e-40 Score=355.41 Aligned_cols=211 Identities=34% Similarity=0.451 Sum_probs=181.2
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGE 240 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1206)
.++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 467999999999999999999999999999999999999997 99999999999887654 789999999888889
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+|-+.++..-+. .. ...+ ..+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~--~~----------------~~~~------------~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPHL--GL----------------FGRP------------SKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCccc--cc----------------ccCC------------CHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 999999998743210 00 0000 01122357888999999999987765
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||.||+||+++|+||+||||||+||.....++++.++++.+..+ .+||.++|+...+..+||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999987544 5555577888999999999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998775
No 72
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-39 Score=338.40 Aligned_cols=211 Identities=25% Similarity=0.353 Sum_probs=181.1
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~ 236 (1206)
..+.||+|||+.|++||+++|+|||||||||||++|.|++.|+ +|+|.+.|.++..... ++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999998 9999999999876554 367999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
+|..|||+||+.|..+-+.. +.+ ...+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~---------lp~------------------------~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK---------LPE------------------------SLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc---------CCH------------------------HHHHHHHHHHHHhcCCChh----h
Confidence 99999999999997653221 110 1123345556888999754 3
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
++.++..||||++||+++|||++.+|+++|+||||+||||-++..+.+.|+++.+..+ .|++.++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEE
Confidence 4567788999999999999999999999999999999999999999999999887655 555558899999999999999
Q ss_pred EEcCCeEEEecChHHHHH
Q 000971 397 LLSDGQIVYQGPRELVLE 414 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1206)
+|.+|+|++.|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 73
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.3e-39 Score=368.94 Aligned_cols=217 Identities=23% Similarity=0.293 Sum_probs=187.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++.+ .....+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 6789999887421 0124699999999999999999999999999999999998764 4899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. ..++.+||++|+..+++..||+||+.|...++ ..+.++.++++.++++.+||.+..++.+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999999875433 2345566678999999999999888774 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 999999999986 57789999999985 7999
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 74
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-39 Score=344.56 Aligned_cols=206 Identities=28% Similarity=0.439 Sum_probs=175.4
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCC---CCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQH---DNHIGEMT 242 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~---d~~~~~lT 242 (1206)
++|+|||+.|++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..+|||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999997 99999999988777666789999995 44465 69
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+|.+..+...+. ..+ ....+ +.+..+++.|+.+|+.+.+|..+|
T Consensus 94 V~d~V~~g~~~~~--g~~---~~~~~-------------------------~d~~~v~~aL~~Vgm~~~~~r~i~----- 138 (254)
T COG1121 94 VKDVVLLGRYGKK--GWF---RRLNK-------------------------KDKEKVDEALERVGMEDLRDRQIG----- 138 (254)
T ss_pred HHHHHHccCcccc--ccc---ccccH-------------------------HHHHHHHHHHHHcCchhhhCCccc-----
Confidence 9999998632111 000 01111 123467889999999999998888
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||+|||-|||||+++|++|+|||||+|+|+.+...|++.|+++.+. +.+|+.++|+...+.++||+|+.|+. +
T Consensus 139 ~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~ 215 (254)
T COG1121 139 ELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-H 215 (254)
T ss_pred ccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-e
Confidence 49999999999999999999999999999999999999999999998764 56666689999999999999999965 6
Q ss_pred EEEecChHHHH
Q 000971 403 IVYQGPRELVL 413 (1206)
Q Consensus 403 iv~~G~~~~~~ 413 (1206)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 88999998775
No 75
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=351.50 Aligned_cols=214 Identities=24% Similarity=0.350 Sum_probs=181.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ .+.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 65 (235)
T cd03261 1 IELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDIS 65 (235)
T ss_pred CeEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35788888763 24699999999999999999999999999999999998764 4799999998753
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
. ..+++.+||++|++.+++.+||+||+.+...... ..+.++..+.+.++++.++|.+..++.+ ..||
T Consensus 66 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (235)
T cd03261 66 GLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELS 138 (235)
T ss_pred ccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCC
Confidence 2 2245679999999999999999999988643221 1234445567899999999988777764 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
|||||||+||+||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++ |+++
T Consensus 139 gG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~ 216 (235)
T cd03261 139 GGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIV 216 (235)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999998774 899999999987 57788999999985 7899
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 217 ~~g~~ 221 (235)
T cd03261 217 AEGTP 221 (235)
T ss_pred EecCH
Confidence 98874
No 76
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=369.32 Aligned_cols=216 Identities=25% Similarity=0.350 Sum_probs=188.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ +.+.+|+||||++++|+++||+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 378899988772 124699999999999999999999999999999999998764 589999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
... ..++.+|||+|++.++|++||+||+.|....+ ..+.++..+.++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 431 23467999999999999999999999986533 2345566678999999999999888874 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|+||+||||||+||+.++..+.+.|+++.++ |.|||++||++. ++...+|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998765 999999999986 68899999999985 79999998
Q ss_pred CC
Q 000971 1066 LG 1067 (1206)
Q Consensus 1066 ~~ 1067 (1206)
..
T Consensus 219 ~~ 220 (356)
T PRK11650 219 PV 220 (356)
T ss_pred HH
Confidence 63
No 77
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-38 Score=368.29 Aligned_cols=214 Identities=25% Similarity=0.361 Sum_probs=189.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||++++. .+.+|+||||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 478999998774 24699999999999999999999999999999999998764 489999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+.++.+..++++++.++|.++.++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999986543 2345666778999999999999888874 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |++++.|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999997 78899999999995 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 78
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.6e-38 Score=364.70 Aligned_cols=214 Identities=28% Similarity=0.384 Sum_probs=187.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ ++.+|+||||+|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 589999998874 34699999999999999999999999999999999998764 489999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ...++.+||++|++.+++.+||.|++.|.+.++. .+..+..+.++++++.++|.+..++.+ ..||+||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 43 2345679999999999999999999987665442 233444556889999999998888875 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999987 68889999999986 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 5
No 79
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=365.31 Aligned_cols=214 Identities=24% Similarity=0.381 Sum_probs=189.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.+. ++.+|+|||+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 588999998874 24699999999999999999999999999999999998764 489999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
... ..+|.+|||+|+..++|++||+||+.|+...+ ..+.++.+++++++++.++|.++.++.+ ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 432 23577999999999999999999999986543 2345666778999999999999888774 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|+||+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999997 68899999999995 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 6
No 80
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-38 Score=337.41 Aligned_cols=196 Identities=28% Similarity=0.420 Sum_probs=167.3
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~ 236 (1206)
..++|++||+.|++||+++|+|||||||||||++|+|...|+ +|.|.++|.++..+.. ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 378999999999999999999999999999999999999997 9999999999886653 257999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc-cc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD-TM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 315 (1206)
++|++||+||+.+...+.+.... +....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999987766543210 12234677899999997665 43
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
+..|||||||||+|||||+.+|++++.||||..||+.++..|++.|+++.+..+ ++|+.++|+ +++...||++
T Consensus 140 -----p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g-~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 -----PSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERG-KTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcC-CEEEEEcCC-HHHHHhCCEE
Confidence 447999999999999999999999999999999999999999999999887544 445546665 4678899999
Q ss_pred EEEcCCeE
Q 000971 396 ILLSDGQI 403 (1206)
Q Consensus 396 ilL~~G~i 403 (1206)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999984
No 81
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-38 Score=366.38 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=188.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeE--EEEEEcCc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT--GNITISGY 905 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 905 (1206)
.+.++||++++. ...+|+|||++|++|++++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 578999998874 24699999999999999999999999999999999998764 36 99999998
Q ss_pred cCCc-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 906 PKKQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 906 ~~~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
+... ...++.+|||+|+..++|.+||+||+.|....+ ..+.++.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999976443 2345566678999999999999988874 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||+|||||+.+|+||+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 899999999987 68899999999985 79999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9985
No 82
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-38 Score=342.90 Aligned_cols=210 Identities=28% Similarity=0.409 Sum_probs=177.7
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ++.+|+||||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCc
Confidence 5778887763 24699999999999999999999999999999999998663 48999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..++.++|++|++.+++.+|++||+.+..... ....+..++.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 1 23457899999998888999999998764332 1223444566889999999988777764 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4999999999986 57788999999986 6777654
No 83
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-39 Score=326.70 Aligned_cols=223 Identities=25% Similarity=0.394 Sum_probs=180.8
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN 236 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~ 236 (1206)
.+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.|+|+++-+.. .++.+|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999988755 45678999999999986542 2578999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1206)
.|| +|++||+.|+.+.++... +.+.+ +++..|+.-+|-+ ..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh
Confidence 999 999999999999887543 11111 2222233333311 22222
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
++...+|||||+||++|||+|+-+|+|||||||||+|||-++..|-+.+.++. ..-+|+.++|.+..+.+..|+.
T Consensus 144 --~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 --HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred --hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhh
Confidence 12234799999999999999999999999999999999999999999999875 3566666899999999999999
Q ss_pred EEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHH
Q 000971 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1206)
..+..|++|++|+.+++ |..|.++.+.||+.
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYis 249 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYIS 249 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHhc
Confidence 99999999999999987 45677777777753
No 84
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-39 Score=323.17 Aligned_cols=206 Identities=32% Similarity=0.373 Sum_probs=182.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
..+++||||.++.|++++|+|||||||||+|++|++++.|+ +|.|++||.+....+ .++.+|.++.+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 45899999999999999999999999999999999999998 999999999876543 3578999998888999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
++|||.|.+++.+.. + .+.+..++.+.+.|+|..|.|+.+|
T Consensus 92 ~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rRv~----- 132 (245)
T COG4555 92 ARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRRVG----- 132 (245)
T ss_pred HHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHHHh-----
Confidence 999999988875431 1 1234567889999999999999998
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
++|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|..+|+..+||+|++|++|+
T Consensus 133 ~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 133 EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 599999999999999999999999999999999999999999999864 335566668899999999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
+|+.|+.+.+..
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999987754
No 85
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4e-38 Score=343.26 Aligned_cols=207 Identities=24% Similarity=0.318 Sum_probs=176.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++. +.+.+|+|+|+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 578899888741 123599999999999999999999999999999999998663 4799999998753
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .+++.++|++|++.+++.+||.||+.+....+. ...++.++.++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988999999999988654331 233445567899999999998877764 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 577789999999864
No 86
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=343.27 Aligned_cols=214 Identities=22% Similarity=0.335 Sum_probs=188.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|++|+|+. +..+|+|+|+.|++|+.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 678999998851 24799999999999999999999999999999999998774 4799999998854
Q ss_pred ----cccccceEEEeecCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 909 ----QETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ----~~~~~~~~gyv~q~~~~-~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
...+++.+|||+|++.. +-.-||.|.+.|+..- ...+.++.+++++++++.+++.+++++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 34567889999999865 3457999999998643 3456667889999999999999998887 468999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||||+||.+|+.+|++|+|||||||||+.+...+++.++++..+ |.|||++||+.. .+...+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 699999999987 57888999999996 79999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 87
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-38 Score=329.04 Aligned_cols=217 Identities=26% Similarity=0.375 Sum_probs=181.3
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~ 236 (1206)
...++|+|||+.|++|||++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 3467999999999999999999999999999999999999987 9999999988765543 368999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
+.+.+||.+|+..+..-+. +.++.+- +..+. +.+..+-..|+.+|+.+.+.+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~slf---------glfsk---------------~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSLF---------GLFSK---------------EDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHHh---------CCCCH---------------HHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998754221 1111111 11111 11234556799999999988877
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+ .|||||+|||+|||+|+.+|+|++-|||++.||+.++.++++.|++++...+.|+|+. +|..+-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHHhhhe
Confidence 6 5999999999999999999999999999999999999999999999988766666665 556788899999999
Q ss_pred EEcCCeEEEecChHHHHH
Q 000971 397 LLSDGQIVYQGPRELVLE 414 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1206)
-|.+|+|+|.||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988654
No 88
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-38 Score=341.94 Aligned_cols=215 Identities=25% Similarity=0.353 Sum_probs=180.9
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++.. ...+.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc
Confidence 577888776410 0114699999999999999999999999999999999998653 48999999987642
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHH
Q 000971 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1206)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl 989 (1206)
.++.++|++|++.+++.+|++||+.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35678999999988888999999988654331 233444567899999999988777764 57999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEec-CcEEEEEcCC
Q 000971 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1066 (1206)
Q Consensus 990 ~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~-gg~~~~~g~~ 1066 (1206)
+||+||+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++...+|++++|++ .|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999987 57788999999985 4899888765
No 89
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.2e-38 Score=362.82 Aligned_cols=216 Identities=24% Similarity=0.374 Sum_probs=187.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. .+.+|+||||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67889988763 24699999999999999999999999999999999998764 4799999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
.. ..++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987543211 12344556678999999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|+|++||++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999997 68899999999985 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 90
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.2e-38 Score=359.75 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=177.4
Q ss_pred ceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCC
Q 000971 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVT 930 (1206)
Q Consensus 853 ~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~~T 930 (1206)
++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 35799999999999999999999999999999999998764 48999999987643 234567999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000971 931 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1206)
Q Consensus 931 v~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsg 1010 (1206)
|+||+.|.+.++. ....+.++.++++++.++|.+..++.+ ..|||||||||+||+||+++|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233445567899999999998888774 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||+.++..+++.|++++++|+|||+++|+++ ++...||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999987 67889999999985 799999975
No 91
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.7e-38 Score=363.33 Aligned_cols=214 Identities=22% Similarity=0.329 Sum_probs=188.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999998874 24699999999999999999999999999999999998764 489999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.++.++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999975433 2344555667999999999999888874 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|++|+|||||||||..++..+.+.|+++.++ |.|||++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999987 68899999999985 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 92
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-38 Score=314.46 Aligned_cols=196 Identities=26% Similarity=0.359 Sum_probs=172.0
Q ss_pred cceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHHHHH
Q 000971 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTVYESLLY 937 (1206)
Q Consensus 859 ~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~ 937 (1206)
..++.|.+||++||+||||||||||||+|+|...+ .+|.|+|||.+... ....|=+..++|+..+|.++||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 45788999999999999999999999999998875 48999999988644 2345668899999999999999999987
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000971 938 SAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1017 (1206)
Q Consensus 938 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~ 1017 (1206)
+..-.+ .. ..+.++.++.++..+||..+.+++.+ .||||||||+++||+|+++-+||+||||.|.||+.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643111 11 24456679999999999999999854 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1018 IVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1018 ~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
++..++.++.++ +.|++++||+|+ +.....|+++++++ |++.|.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999765 899999999998 89999999999996 799999985
No 93
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.8e-38 Score=356.87 Aligned_cols=214 Identities=28% Similarity=0.379 Sum_probs=184.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||+|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899998774 24699999999999999999999999999999999998664 479999999875
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ...++.+||++|++.+++.+||+||+.+.+..+ ..+.++..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 224567999999999999999999998755432 1233444556888999999998877774 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999987 67789999999985 78999997
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 94
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-38 Score=339.00 Aligned_cols=210 Identities=25% Similarity=0.419 Sum_probs=178.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. ++.+|+||||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (210)
T cd03269 1 LEVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLD 65 (210)
T ss_pred CEEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchh
Confidence 35788887763 24699999999999999999999999999999999998653 4899999998764
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..++.++|++|++.+++.+|++||+.+....+. ....+.++.+.++++.+++.+..++.+ ..||||||||
T Consensus 66 ~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (210)
T cd03269 66 I-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQK 136 (210)
T ss_pred H-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHH
Confidence 3 345679999999988889999999988654432 223444567899999999988777653 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 137 l~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 137 VQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999986 57788999999985 6777654
No 95
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.7e-37 Score=357.08 Aligned_cols=206 Identities=23% Similarity=0.331 Sum_probs=177.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
.++|+|||++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 56999999999999999999999999999999999999997 9999999999876542 45799999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.|+....+... .+....+.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998755332100 011234667899999998777554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+.|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|+++.+..+ .+|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999999876434 45556888899999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 96
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-38 Score=329.43 Aligned_cols=217 Identities=26% Similarity=0.345 Sum_probs=180.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++.+|++..++... ....+|+||||+|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 367889887775321 112599999999999999999999999999999999998774 489999999875
Q ss_pred Ccc----cccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCC
Q 000971 908 KQE----TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSG 980 (1206)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~ 980 (1206)
... .+.+.+.+|+|++. +.|..||++.|.=.... ...++.++ ++.++++.+||.+ ..++. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcC-----chh
Confidence 442 36778999999975 57899999988644322 23333333 3999999999976 44554 457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
||||||||++|||||+.+|++|+||||||+||+..++.|++.|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 889999999987 47789999999996 79
Q ss_pred EEEEcCCC
Q 000971 1060 EIYVGPLG 1067 (1206)
Q Consensus 1060 ~~~~g~~~ 1067 (1206)
++..++.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999864
No 97
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=339.98 Aligned_cols=213 Identities=28% Similarity=0.376 Sum_probs=181.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ .+.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecC
Confidence 35788887763 24699999999999999999999999999999999998653 4899999997653
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.++|.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 2234578999999988999999999988654431 233344567899999999988777764 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999987 57788999999985 78888876
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 98
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-37 Score=338.84 Aligned_cols=211 Identities=26% Similarity=0.402 Sum_probs=178.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+||||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 35788888764 23699999999999999999999999999999999998653 4799999998754
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
.. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 31 12357999999998888899999998764432 1233445567889999999988777764 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++...+|++++|.+ |+++++|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999864 899999999986 57788999999985 7888765
No 99
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=360.15 Aligned_cols=217 Identities=22% Similarity=0.295 Sum_probs=185.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||+++++.. ...+.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5789999887411 0135699999999999999999999999999999999998764 4799999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .+++.+||++|++.+++.+||+||+.|....+ ..+.++.++.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875443 2234445567899999999998877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999987 57788999999985 7999
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99875
No 100
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-37 Score=343.42 Aligned_cols=215 Identities=27% Similarity=0.352 Sum_probs=180.3
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ++.+|+|+|+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCC
Confidence 5678887763 24699999999999999999999999999999999998653 47999999987643
Q ss_pred c---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCC-------CCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 910 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 910 ~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
. . .++.++|++|++.+++.+||+||+.+......... ...++..+.+.++++.++|.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 2 1 23458999999999999999999988654321110 123344567899999999988777663
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999878999999999987 57788999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888874
No 101
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=360.37 Aligned_cols=214 Identities=23% Similarity=0.355 Sum_probs=187.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|++..+. +..+|+|+|+++++|++++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 589999998763 24699999999999999999999999999999999998764 489999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
.. ...+|.+|||+|++.++|++||.||+.|....+ ..+..+.++++.++++.++|.+..++.+ ..||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999975433 2345566678999999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999988654 899999999987 78899999999985 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 102
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-37 Score=360.23 Aligned_cols=202 Identities=25% Similarity=0.297 Sum_probs=178.7
Q ss_pred ceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc---cc----cceEEEeecCCCC
Q 000971 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDIH 925 (1206)
Q Consensus 853 ~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~q~~~~ 925 (1206)
.+.+|+|+||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++... .+ ++.+|||+|++.+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45699999999999999999999999999999999998764 589999999876532 12 5689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000971 926 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1005 (1206)
Q Consensus 926 ~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LD 1005 (1206)
+|.+||+||+.|...+. ..+.++..+++.++++.++|.+..++.+ ..|||||||||+|||||+.+|+|||||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 2345666778999999999998888774 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1006 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|||++||+.++..+++.|+++.++ |+|||++||++. ++...+|++++|++ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999998754 899999999987 57889999999985 799999975
No 103
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=360.88 Aligned_cols=206 Identities=25% Similarity=0.364 Sum_probs=179.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999999876554 3689999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+.++... .+....++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999865332100 012234678899999998777655 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999876533 45666688888999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 104
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.3e-37 Score=339.75 Aligned_cols=215 Identities=27% Similarity=0.425 Sum_probs=180.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++.. .....+|+|+|+++++|++++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 5688898877411 0112699999999999999999999999999999999998663 4799999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ..+++.+||++|++.+++.+||+||+.+....+ ....++..+.++++++.++|.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999998889999999998765433 2234455667899999999988777764 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++...+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6777654
No 105
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-37 Score=362.01 Aligned_cols=214 Identities=25% Similarity=0.369 Sum_probs=185.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++++. .+.+|+|+|++|++|++++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378899988773 24699999999999999999999999999999999998764 479999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
... ..++.+|||+|+..+++.+||+||+.|....+ ..+.++.++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 431 23467999999999999999999999876443 1234455667999999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
|||+|||||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68889999999985 79999998
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 106
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2e-37 Score=341.61 Aligned_cols=213 Identities=26% Similarity=0.353 Sum_probs=180.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ .+.+|+|+||++++|+++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 65 (232)
T cd03218 1 LRAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDIT 65 (232)
T ss_pred CeEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 35778887763 24699999999999999999999999999999999998663 4799999998753
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
.. . .++.++|++|++.+++.+||+||+.+....+. ....+....++++++.+++.+..++.+ ..||||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 137 (232)
T cd03218 66 KLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGG 137 (232)
T ss_pred cCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHH
Confidence 21 1 23468999999999999999999987643321 223344556889999999988777663 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 215 (232)
T cd03218 138 ERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEG 215 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEe
Confidence 999999999999999999999999999999999999999999877999999999987 68889999999985 7888888
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 216 ~~ 217 (232)
T cd03218 216 TP 217 (232)
T ss_pred CH
Confidence 75
No 107
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-37 Score=341.74 Aligned_cols=217 Identities=26% Similarity=0.382 Sum_probs=181.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ .+.+|+|||++|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367899988874 24699999999999999999999999999999999998653 479999999875
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+..+.++++++.++|.+..++.+ ..||+||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 1245689999999888889999999886543211 00122334556889999999988777763 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999775 899999999986 57788999999985 7899888
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 74
No 108
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-37 Score=363.22 Aligned_cols=218 Identities=26% Similarity=0.354 Sum_probs=186.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||.|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 378899988774 35799999999999999999999999999999999998763 489999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.+|||+|++.+++.+||+|++.++...+.. .....+..++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 33567799999999998899999999886432110 01112334567899999999998888774 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||+.|||||+++|+||||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57889999999985 789999
Q ss_pred cCCC
Q 000971 1064 GPLG 1067 (1206)
Q Consensus 1064 g~~~ 1067 (1206)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9863
No 109
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.2e-37 Score=353.47 Aligned_cols=212 Identities=23% Similarity=0.360 Sum_probs=185.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|++++++ ++.+|+|+||++++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67889988773 24699999999999999999999999999999999998764 4899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ...++.+||++|++.+++.+||.||+.|.+.++. .+.++..+.++++++.+||.+..++.+ +.||+|||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998776542 233444567899999999999888774 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||++||+||+++|++|||||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999987 68889999999985 799999985
No 110
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-38 Score=320.31 Aligned_cols=205 Identities=26% Similarity=0.349 Sum_probs=182.5
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCccc----ccceEEEeecCCCCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 927 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 927 (1206)
+++++++|||+.|++||++||+|||||||||.+.++.|...+ .+|.|.+||.++.... .+.-+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 457899999999999999999999999999999999998774 4899999999876533 2335899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000971 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1206)
Q Consensus 928 ~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEP 1007 (1206)
.+||+||++....++.. +....+++.+++++|+.+++.++++++. ..||||||+|+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999876655532 2334566777899999999999999873 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1008 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
.+|+||.+-..|+++++.|++.|..|++|-|.-. |....|||..++.+ |+++..|..
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 9999999999999999999999999999999987 79999999999996 799999986
No 111
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=358.28 Aligned_cols=206 Identities=22% Similarity=0.361 Sum_probs=179.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc-ceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~~~~~lTV 243 (1206)
..+|+|+|+.|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+. +.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 99999999998766554 789999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+.++... .+....++++++.+||.+..+.. ++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999875432110 01233567889999998877654 457
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886533 45566688899999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 112
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-37 Score=338.66 Aligned_cols=208 Identities=28% Similarity=0.390 Sum_probs=173.5
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++.. ...+.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehh
Confidence 3578888877410 0014699999999999999999999999999999999998663 4799999998754
Q ss_pred ccc-------ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 000971 909 QET-------FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1206)
Q Consensus 909 ~~~-------~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 981 (1206)
... .++.++|++|++.+++.+||+||+.+....+. ......++.++++++.++|.+..++.+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 211 24579999999999999999999998754432 223344567899999999988777763 579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 982 SgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||||||++||+||+.+|+||+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++. .+|++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~-~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LAE-YADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHh-hhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999977 5899999999986 354 89999999864
No 113
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.3e-37 Score=338.32 Aligned_cols=221 Identities=37% Similarity=0.611 Sum_probs=181.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC-CCeeEEEEEEcCccC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT-GGYITGNITISGYPK 907 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 907 (1206)
+.|+||+|.++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|... +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5688898887421 013579999999999999999999999999999999999764 113479999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHH-HHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEE-VMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
....+++.++|++|++.+++.+||+||+.|.+....+...........+++ .++.+++.+..++. +..||+|||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544456779999999999999999999998765433222222223334555 89999998777665 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777999999999985468899999999986 7888765
No 114
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-37 Score=335.63 Aligned_cols=207 Identities=29% Similarity=0.397 Sum_probs=176.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ .+.+|+|+||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (208)
T cd03268 1 LKTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQ 65 (208)
T ss_pred CEEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCccc
Confidence 35788887763 24699999999999999999999999999999999998653 4899999998754
Q ss_pred c-ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 909 Q-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 909 ~-~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
. ...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.++|.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 133 (208)
T cd03268 66 KNIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQ 133 (208)
T ss_pred chHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHH
Confidence 3 2235578999999988889999999987654321 1 1345788999999988777764 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 134 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 134 RLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998877999999999987 57778999999985 6887765
No 115
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.3e-37 Score=358.63 Aligned_cols=206 Identities=26% Similarity=0.398 Sum_probs=179.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999987 9999999999876554 4689999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+.++... .+....++.+++.+||++..|..+ ..
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 999999865332100 012235678999999998877554 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876533 45566688888999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
++.|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 116
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.9e-36 Score=370.95 Aligned_cols=217 Identities=28% Similarity=0.438 Sum_probs=182.1
Q ss_pred CCCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEE
Q 000971 822 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNIT 901 (1206)
Q Consensus 822 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~ 901 (1206)
.|.....++|+||+|.|+.. ...+|+|+|++|+|||.+||+|+||||||||+|+|+|...+ .+|+|+
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEE
Confidence 34445689999999999631 23699999999999999999999999999999999998874 489999
Q ss_pred EcCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cc
Q 000971 902 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QS 971 (1206)
Q Consensus 902 i~g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~ 971 (1206)
+||+++.+ ..+|+.+|||+|++.++. -|++||+.++. | +.+ ++.+.+++...|..+.. ++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~----~e~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EAT----DEEIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCC----HHHHHHHHHHhCcHHHHHhccccccc
Confidence 99998654 567899999999998875 69999998753 1 222 23366666666665543 45
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeE
Q 000971 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 972 ~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
.+|+. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.+.. .|+|+|+++|.++ .++.+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 55654 46899999999999999999999999999999999999999999999875 5899999999986 58889999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 799999985
No 117
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.3e-37 Score=339.86 Aligned_cols=214 Identities=23% Similarity=0.294 Sum_probs=178.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCC-----CCCeeEEEEEEc
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK-----TGGYITGNITIS 903 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~-----~~~~~~G~i~i~ 903 (1206)
++++||++.++ .+.+|+|+||+|++||++||+||||||||||+++|+|.. . +.+|+|.++
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~ 65 (227)
T cd03260 1 IELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLD 65 (227)
T ss_pred CEEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEEC
Confidence 35778887763 236999999999999999999999999999999999976 4 358999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
|.++.. ..+++.+||++|++.++ .+||+||+.+....+. ....++.++.++++++.++|.+..+..+. +
T Consensus 66 g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~ 139 (227)
T cd03260 66 GKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---A 139 (227)
T ss_pred CEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---c
Confidence 987532 22456799999998887 7999999988654331 11222345678899999999877666421 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.+|++++|.+ |
T Consensus 140 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G 216 (227)
T cd03260 140 LGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-G 216 (227)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877 99999999987 57788999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 217 ~i~~~g~~ 224 (227)
T cd03260 217 RLVEFGPT 224 (227)
T ss_pred EEEEecCc
Confidence 89988875
No 118
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=340.59 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=182.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++.. .+...+|+++||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5678888876410 0012699999999999999999999999999999999998764 4799999998754
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. ..++.++|++|++.+++.+|++||+.+....+. .........++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999999999999988654331 233444567899999999988777763 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999985 7899
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 119
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.9e-37 Score=358.14 Aligned_cols=207 Identities=23% Similarity=0.346 Sum_probs=180.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCce--eEEEECCeeCCCCCc-cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVS--GRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~--G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+||.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 45999999999999999999999999999999999999987 7 999999999876554 46799999999999999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.|+.+..+... .+....++++++.+||++..|..+.
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~~---- 136 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLPA---- 136 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCChh----
Confidence 99999999865432110 0122346788999999988876654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 137 -~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 137 -QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 7999999999999999999999999999999999999999999998865432566677889999999999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999874
No 120
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.7e-37 Score=356.11 Aligned_cols=207 Identities=21% Similarity=0.296 Sum_probs=179.3
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~ 236 (1206)
.+.+|+|+|+.|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999997 9999999999876554 457999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
++|++||+||+.|+.+..+... .+....+.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865433210 011234677899999987777655
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+ .|||||||||+|||||+.+|+|+||||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++..++|+|+
T Consensus 128 ~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 D-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred h-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 699999999999999999999999999999999999999999999876533 4556668899999999999999
Q ss_pred EEcCCeEEEecChHHHH
Q 000971 397 LLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1206)
+|++|++++.|+++++.
T Consensus 202 vl~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEIL 218 (363)
T ss_pred EEeCCEEEeeCCHHHHH
Confidence 99999999999998875
No 121
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=342.66 Aligned_cols=216 Identities=26% Similarity=0.313 Sum_probs=178.4
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++||+++++. ++.+|+|+|+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccc
Confidence 57788877631 14699999999999999999999999999999999998653 47999999987542
Q ss_pred ------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcC-----CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 910 ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 910 ------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
...++.++|++|++.+++.+||+||+.+...... ......+...+.+.++++.++|.+..++. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 1235679999999988899999999987532100 00111223445688999999998777665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999997 57779999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 789988875
No 122
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.3e-37 Score=335.62 Aligned_cols=206 Identities=25% Similarity=0.333 Sum_probs=175.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ +++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 56888888763 123699999999999999999999999999999999998653 4899999998754
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .+++.++|++|++.+++.+|+.||+.+....+. ...+..++.++++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988889999999988654321 223444567899999999987766663 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++...+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999987 577789999999864
No 123
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-37 Score=348.62 Aligned_cols=218 Identities=20% Similarity=0.293 Sum_probs=181.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 78899998874210 0123699999999999999999999999999999999998764 4899999998764
Q ss_pred c-----ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc--cccccccCCCCCCC
Q 000971 909 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK--PLIQSLVGLPGVSG 980 (1206)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~~g~~~~~~ 980 (1206)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++..+.++++++.+||. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134567999999863 233579999999865432 244556667799999999997 556665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
||||||||++||+||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 999999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999875
No 124
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6e-37 Score=339.46 Aligned_cols=214 Identities=22% Similarity=0.337 Sum_probs=181.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEI--TSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 56888888763 24699999999999999999999999999999999998653 4799999998754
Q ss_pred c-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 909 Q-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
. ..+++.++|++|++.+++.+||+||+.|...... .....+.++.+.++++.++|.+..+..+ ..||+
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 2235679999999988889999999987542111 1234445567899999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999987 57788999999985 789999
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 125
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4e-37 Score=358.22 Aligned_cols=206 Identities=27% Similarity=0.367 Sum_probs=179.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|+++++ +|+|.++|.++....+ ++.++||+|+..+||.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999999876554 4679999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+.++... .+....++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999865332110 011234677899999998877655 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|+||||++|||..++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45566688999999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
+..|+++++.
T Consensus 224 ~~~g~~~~i~ 233 (375)
T PRK09452 224 EQDGTPREIY 233 (375)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 126
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.4e-37 Score=334.24 Aligned_cols=192 Identities=29% Similarity=0.373 Sum_probs=163.6
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCC-CCCCCCHH
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTVY 932 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~-~~~~~Tv~ 932 (1206)
+.+|+||||++++|++++|+|||||||||||++|+|...+ .+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 3599999999999999999999999999999999998663 48999999987644344567999999974 33467999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000971 933 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1012 (1206)
Q Consensus 933 e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD 1012 (1206)
||+.+...... . ....++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-----A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 1 1245789999999998887764 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 1013 ARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 1013 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999987 57778999999986 5653
No 127
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.5e-37 Score=336.02 Aligned_cols=214 Identities=26% Similarity=0.395 Sum_probs=180.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++. +.+.+|+|||+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 357888877641 114699999999999999999999999999999999998663 4899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ..+++.+||++|++.+++.+|++||+.+....+. ...++..+.++++++.++|.+..++.+ ..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345679999999988889999999988654332 223344556889999999988777763 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999987 57778999999985 788888874
No 128
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=8.2e-37 Score=340.60 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=181.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67899988773 23699999999999999999999999999999999998653 4799999997653
Q ss_pred c-----------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 000971 909 Q-----------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1206)
Q Consensus 909 ~-----------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 977 (1206)
. ...++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235578999999988888999999987543211 123344556788999999998777665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789988874
No 129
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.7e-37 Score=334.42 Aligned_cols=205 Identities=25% Similarity=0.356 Sum_probs=174.0
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ +.+.+|+|+|+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEccc
Confidence 5678887763 123699999999999999999999999999999999998653 47999999986532
Q ss_pred c------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 910 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 910 ~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
. .+++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 245679999999999999999999988654332 233444567889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999998777999999999986 567789999999864
No 130
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-37 Score=339.99 Aligned_cols=213 Identities=27% Similarity=0.377 Sum_probs=180.2
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++. .+.+|+|+|++|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 57788877641 13599999999999999999999999999999999998663 47999999986532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc--ccccccCCCCCCCCCHH
Q 000971 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgG 984 (1206)
..+++.++|++|++.+++.+||+||+.+...++ ..+.+...+.+.++++.++|.+ ..++. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 233557899999999999999999998865433 1233445567899999999985 55655 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999987 57788999999985 788988
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 874
No 131
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-37 Score=339.96 Aligned_cols=212 Identities=26% Similarity=0.344 Sum_probs=179.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56888887763 24699999999999999999999999999999999998653 4799999998764
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..+.+||++|++.+++..||.||+.+....+ .....+..+.+.++++.++|.+..++. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 2345799999998888899999998764432 123344456789999999998877765 35799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEec-CcEEEEEcCC
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1066 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~-gg~~~~~g~~ 1066 (1206)
++||++|+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++...+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999987 57889999999985 5888887764
No 132
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-38 Score=370.11 Aligned_cols=214 Identities=27% Similarity=0.443 Sum_probs=182.7
Q ss_pred CcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCc
Q 000971 826 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY 905 (1206)
Q Consensus 826 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 905 (1206)
...++|+||+|.|+..+ ..++|+|+||+|+|||.||||||||+||||+.++|....+| .+|+|.+||.
T Consensus 463 ~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~P--tsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDP--TSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCCeEEECCe
Confidence 35799999999998653 46799999999999999999999999999999999988774 5899999999
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-------CCccccccccCC
Q 000971 906 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-------ELKPLIQSLVGL 975 (1206)
Q Consensus 906 ~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l-------~L~~~~~~~~g~ 975 (1206)
|+++ ..+++.+|+|.|+|.++. -||+||+.|+.. ..+.++ |.++.++. ++.+-.|+.+|.
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VGE 600 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVGE 600 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccCC
Confidence 9765 457889999999999986 699999999753 233332 34444332 455667888988
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
.|. .||||||||++|||||++||.||||||.||+||+++...|+++|.++.+ ++|||++.|..| ..+.+|+|++++
T Consensus 601 kG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 601 KGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVID 676 (716)
T ss_pred ccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEc
Confidence 764 7999999999999999999999999999999999999999999998765 699999999976 578899999999
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|..
T Consensus 677 ~-G~V~E~G~h 686 (716)
T KOG0058|consen 677 K-GRVVEMGTH 686 (716)
T ss_pred C-CeEEecccH
Confidence 6 799999963
No 133
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=335.20 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=180.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++.. ...+.+|+++||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEc
Confidence 37899999887411 0114699999999999999999999999999999999998653 489999999876
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 908 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 908 ~~~~------~-~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
.... + ++.+||++|++.+++.+|++||+.+...++ ....++.+++++++++.++|.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4311 1 256899999998888999999998865432 1233444567899999999988777653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
||||||||++||++|+.+|+||||||||+|||+.+...+.+.|+++++ .|+|||+++|+++ ++ ..+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999986 34 44689999985 78
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 134
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-37 Score=344.67 Aligned_cols=203 Identities=25% Similarity=0.305 Sum_probs=173.8
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc---c----ccceEEEeecCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 924 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~ 924 (1206)
+.+.+|+|+||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.+||++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 346799999999999999999999999999999999998764 479999999875421 1 1356999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000971 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1206)
Q Consensus 925 ~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~L 1004 (1206)
+++.+||+||+.+..... ........+.++++++.++|.+..++.+ ..||||||||++||+||+.+|+||||
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 898999999998865432 1223444567889999999998888774 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1005 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999987 57788999999985 789988874
No 135
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-37 Score=344.06 Aligned_cols=215 Identities=24% Similarity=0.322 Sum_probs=181.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++. ...+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 3789999988741 23599999999999999999999999999999999998663 479999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.+||++|++. .++..||.||+.|..... ....++.++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223457999999863 345689999998864321 2334445567899999999988887764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 56788999999985 789999
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 885
No 136
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.5e-37 Score=335.85 Aligned_cols=211 Identities=28% Similarity=0.409 Sum_probs=176.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++ .+.+|+||||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcC
Confidence 35778887663 24699999999999999999999999999999999998763 4799999998754
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCCCCCCH
Q 000971 909 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. . .++.++|++|++.+++.+|++||+.+...... ..+....+.++++.+ ++.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 31 1 24568999999999999999999988654321 122344567888888 576666655 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|++ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57888999999985 788888
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 874
No 137
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=321.97 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=192.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+++++|+.++ +.+.+++||||.++||+++|++|||||||||++++|.|...+ .+|.|.++|.+.+
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchh
Confidence 5666666443 467899999999999999999999999999999999998774 4899999999987
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
+.. +.++||+|.+..++|.+||.|.|.|-|.|+ .++.++....++.+|+.+++.......+ +.||-|++|+
T Consensus 68 ~~~-~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQK 138 (300)
T COG4152 68 QEI-KNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQK 138 (300)
T ss_pred hhh-hhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHH
Confidence 543 456899999999999999999999999887 4677888888999999999999888774 6799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+.+-.+++++|++|+||||.|||||.+.+.+.+.+.+++++|.|||+++|+++ .+.++||++++|++ |+.|..|++
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999999999999999999997 68999999999996 688888986
No 138
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.7e-37 Score=341.11 Aligned_cols=217 Identities=25% Similarity=0.281 Sum_probs=178.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.+. .++.+|+|+||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 56788887763 023599999999999999999999999999999999998663 4799999998753
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcC-----CCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 000971 909 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1206)
Q Consensus 909 ~------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 977 (1206)
. ..+++.+||++|++.+++.+||+||+.+...-.. ......+..++++.++++.++|.+..++.
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1235679999999988899999999976421100 00111233456788999999998777765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ .+.+.||++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 57788999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 788888875
No 139
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-36 Score=342.25 Aligned_cols=215 Identities=20% Similarity=0.298 Sum_probs=182.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ ++.+|+||||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478999998763 24699999999999999999999999999999999998663 479999999875
Q ss_pred Ccc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 000971 908 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1206)
Q Consensus 908 ~~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 981 (1206)
... ..++.++|++|+..+++.+||.||+.+...... ..+.+..+..+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988899999999987543211 1233444556888999999988777764 579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 982 SgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
|||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 799
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 140
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-37 Score=346.73 Aligned_cols=217 Identities=25% Similarity=0.308 Sum_probs=180.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++... .....+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 68999999884210 0113599999999999999999999999999999999998764 4799999998763
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
. ..+++.+|||+|++ .++ ..||+||+.|+.... ..+.++..+.++++++.++|. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----P 143 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----c
Confidence 1 23456799999986 344 479999999875332 234445556789999999997 556665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..|||||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++ |.|||+++|+++ ++.+.+||+++|++
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~- 221 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK- 221 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999987 57889999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (290)
T PRK13634 222 GTVFLQGTP 230 (290)
T ss_pred CEEEEECCH
Confidence 799999975
No 141
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=8.4e-37 Score=348.68 Aligned_cols=206 Identities=26% Similarity=0.381 Sum_probs=178.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1206)
..+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999997 9999999998864322 467999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|.++..+... .+....++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998665433110 0112245678899999988887765
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999853 3 5566668888999999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998754
No 142
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.9e-37 Score=365.20 Aligned_cols=210 Identities=22% Similarity=0.404 Sum_probs=176.4
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIG 239 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1206)
++.+||+|+|++|+|||.+||+|||||||||+.+.|..+++|+ +|+|.+||+|+.++++ ++.+|+|.|+|.+|.
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs 555 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS 555 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec
Confidence 4567999999999999999999999999999999999999998 9999999999998876 478999999999987
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
. ||+|||.|+.. . .+.|..+.++. +++..--+.++++.+||.||++
T Consensus 556 ~-sI~eNI~YG~~--~-----------------------~t~e~i~~AAk--------~ANah~FI~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 556 G-SIRENIAYGLD--N-----------------------ATDEEIEAAAK--------MANAHEFITNFPDGYNTVVGEK 601 (716)
T ss_pred c-cHHHHHhcCCC--C-----------------------CCHHHHHHHHH--------HhChHHHHHhCccccccccCCc
Confidence 5 99999999754 1 11122222221 1111123567899999999998
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
+. .||||||||++|||||+.+|.||+|||.||+||+++...+.+.|.+..+ ++|+++ |.|.. .+.+.+|+|+|++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAHRL-STV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAHRL-STVRHADQIVVID 676 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eehhh-hHhhhccEEEEEc
Confidence 77 6999999999999999999999999999999999999999999988653 355554 65654 5678899999999
Q ss_pred CCeEEEecChHHHHH
Q 000971 400 DGQIVYQGPRELVLE 414 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1206)
+|++++.|+++++++
T Consensus 677 ~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 677 KGRVVEMGTHDELLS 691 (716)
T ss_pred CCeEEecccHHHHhh
Confidence 999999999999874
No 143
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=346.56 Aligned_cols=218 Identities=23% Similarity=0.311 Sum_probs=180.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++... .....+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 78899999885210 0113599999999999999999999999999999999998764 3799999986531
Q ss_pred ---------------------------cccccceEEEeecCC-CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHH
Q 000971 909 ---------------------------QETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVM 960 (1206)
Q Consensus 909 ---------------------------~~~~~~~~gyv~q~~-~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l 960 (1206)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++.++++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 122456799999985 2334579999999865432 234556667899999
Q ss_pred HHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000971 961 ELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1039 (1206)
Q Consensus 961 ~~l~L~-~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1039 (1206)
+.+||. +..++. +..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 567765 35799999999999999999999999999999999999999999999998779999999999
Q ss_pred CchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1040 PGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1040 p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+. .+.+.+||+++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 57789999999985 789999985
No 144
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=344.49 Aligned_cols=217 Identities=26% Similarity=0.351 Sum_probs=181.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899999885110 0113599999999999999999999999999999999998764 4899999998763
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++.+.++.++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23456799999986 3444 69999999875432 234555667789999999996 455655 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999985
No 145
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.5e-36 Score=332.29 Aligned_cols=208 Identities=24% Similarity=0.319 Sum_probs=175.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ +++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 56888888773 123699999999999999999999999999999999998763 4899999998653
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .+++.++|++|++.+++.+|++||+.+....+ ....++....++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888899999998865433 1233444556889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++...+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777999999999987 57778999999986 564
No 146
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.8e-37 Score=331.65 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=174.1
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ++.+|+++||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 5788888764 24699999999999999999999999999999999998663 47999999987531
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 910 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 910 -----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
..+++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345679999999998989999999987642111 1233444567889999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877999999999987 577889999999864
No 147
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=330.87 Aligned_cols=209 Identities=32% Similarity=0.477 Sum_probs=176.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ +..+|+|+||++++| ++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccc
Confidence 35788887763 236999999999999 9999999999999999999998663 4899999998754
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ...++.++|++|++.+++.+||.||+.+...++. ...++..+.++++++.++|.+..++.+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 3 2235678999999999999999999988654431 223334566889999999988777663 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999876 599999999986 46778999999985 6877654
No 148
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-34 Score=383.99 Aligned_cols=216 Identities=23% Similarity=0.350 Sum_probs=187.7
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++||++.++. +++.+|+|||+.+++||++||+|||||||||||++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46899999988741 135699999999999999999999999999999999998764 48999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 907 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 907 ~~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..++.+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876653 233445567899999999998888874 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|||||+||+||+.+|+||||||||+|||+.+++.+++.|++++ +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 6999999999987 57788999999995 7899998
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 74
No 149
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-37 Score=324.04 Aligned_cols=222 Identities=27% Similarity=0.369 Sum_probs=189.7
Q ss_pred cccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCC
Q 000971 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNH 237 (1206)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~ 237 (1206)
-....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|.+++...++ .-++..+|...+
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 34578999999999999999999999999999999999999998 99999999999988775 357889999999
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
|++|||.||+..++..+.. +.......+ ...+..+....+..+|+.+||.+.+|+..|
T Consensus 91 F~~lTVlENv~va~~~~~~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 91 FPGLTVLENVAVGAHARLG---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred cCCCcHHHHHHHHhhhhhh---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhhcchhh
Confidence 9999999999998764421 000000000 000112344567889999999999999887
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+ ||+||+||+.|||||+.+|++||||||.+||.+.-+.++.+.|+++.+ .++++|+.+.|++.-++.+||+|+|
T Consensus 149 ~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~V 222 (250)
T COG0411 149 N-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVV 222 (250)
T ss_pred c-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEe
Confidence 4 999999999999999999999999999999999999999999999875 4567788899999999999999999
Q ss_pred EcCCeEEEecChHHHHH
Q 000971 398 LSDGQIVYQGPRELVLE 414 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1206)
|+.|+++..|+++++.+
T Consensus 223 l~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 223 LNYGEVIAEGTPEEVRN 239 (250)
T ss_pred ccCCcCcccCCHHHHhc
Confidence 99999999999999863
No 150
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=322.07 Aligned_cols=207 Identities=27% Similarity=0.377 Sum_probs=180.6
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCccc----ccceEEEeecCCCCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 927 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 927 (1206)
+...+++||||++++||++||+||||||||||+|+|+|...+ .+|+|.++|.++.... .+.-++--+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 567899999999999999999999999999999999998874 4799999999865422 2445778899999999
Q ss_pred CCCHHHHHHHhhhhc--------CCCC-CCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 000971 928 FVTVYESLLYSAWLR--------LPPE-VDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVAN 998 (1206)
Q Consensus 928 ~~Tv~e~l~~~a~lr--------~~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~ 998 (1206)
.+||.||+..++..+ .+.. -..++..++..++|+.+||.+.+|.+.| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 999999998875433 1111 1245567788999999999999999865 6999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 999 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 999 P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+++. ++.+||||++|+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 7999999999984 8999999999996 7999999863
No 151
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-36 Score=333.99 Aligned_cols=217 Identities=24% Similarity=0.296 Sum_probs=173.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.+... .....+|+|+|++|++|+++||+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5688898877410 0012699999999999999999999999999999999998653 4799999998764
Q ss_pred c------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 000971 909 Q------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 979 (1206)
. ..+++.+||++|++ .+++.+||+||+.+....... ....+..+..++++++.+++. ...+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 456789999999876443321 111111122236889999995 455655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 899999999987 56778999999985 6
Q ss_pred EEEEEc
Q 000971 1059 QEIYVG 1064 (1206)
Q Consensus 1059 ~~~~~g 1064 (1206)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 877654
No 152
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=348.12 Aligned_cols=218 Identities=24% Similarity=0.347 Sum_probs=181.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++... .....+|+|||++|++|+++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 589999999885210 0123599999999999999999999999999999999998764 479999999765
Q ss_pred Cc-------------------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000971 908 KQ-------------------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK 966 (1206)
Q Consensus 908 ~~-------------------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 966 (1206)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++...++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3554 59999998864321 234445556788999999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHH
Q 000971 967 -PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIF 1045 (1206)
Q Consensus 967 -~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~ 1045 (1206)
+..++. +..||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 456554 4579999999999999999999999999999999999999999999998877999999999986 477
Q ss_pred HhcCeEEEEecCcEEEEEcCC
Q 000971 1046 DAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1046 ~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999985
No 153
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=337.67 Aligned_cols=215 Identities=20% Similarity=0.272 Sum_probs=181.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ .+.+|+||||.|++|++++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 478999998874 24699999999999999999999999999999999998663 479999999765
Q ss_pred Cc----------------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000971 908 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-Q 970 (1206)
Q Consensus 908 ~~----------------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 970 (1206)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+.++++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1345679999999999999999999987542111 123445566789999999998753 5
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCe
Q 000971 971 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDE 1050 (1206)
Q Consensus 971 ~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~ 1050 (1206)
.. +..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++...||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 44 3579999999999999999999999999999999999999999999999877999999999987 57778999
Q ss_pred EEEEecCcEEEEEcCC
Q 000971 1051 LFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1051 v~ll~~gg~~~~~g~~ 1066 (1206)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 789988874
No 154
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-37 Score=311.56 Aligned_cols=216 Identities=26% Similarity=0.374 Sum_probs=182.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
|..+|++|++. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 45689999874 45799999999999999999999999999999999997764 3799999999876
Q ss_pred cc---cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 909 QE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 909 ~~---~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
.. ...+..+.++|+..+....||+|-+.++..-.. ..-...+..+.++++|+..++.+++.+. ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~-~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHR-SGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccc-cCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 53 345677999999888777899999998753211 1112224445688999999999988776 35799999
Q ss_pred HHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 986 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 986 rqrl~ia~aL~~------~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+|+-||.+. ...++|||++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 346999999999999999999999999999999999999999985 6788999999995 79
Q ss_pred EEEEcCCC
Q 000971 1060 EIYVGPLG 1067 (1206)
Q Consensus 1060 ~~~~g~~~ 1067 (1206)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999874
No 155
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=343.15 Aligned_cols=215 Identities=26% Similarity=0.370 Sum_probs=181.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++. ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 5889999998741 23599999999999999999999999999999999998663 489999999876
Q ss_pred C-----cccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 000971 908 K-----QETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1206)
Q Consensus 908 ~-----~~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 981 (1206)
. ...+++.+||++|++. .+...||+||+.+..... ..+.++..+.++++++.++|.+..++. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1234567999999874 234579999998864322 233445556789999999999887776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 982 SgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
|||||||++|||||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999987 46678999999986 689
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999985
No 156
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.1e-37 Score=332.27 Aligned_cols=199 Identities=26% Similarity=0.418 Sum_probs=165.1
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCC--CCCCH
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTV 931 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~~Tv 931 (1206)
+.+|+|||++|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 4799999998653 2456799999998763 34899
Q ss_pred HHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000971 932 YESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1206)
Q Consensus 932 ~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsg 1010 (1206)
+||+.+....... .....+..++.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112334456899999999987777663 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998878999999999987 57788999999974 4 56654
No 157
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=351.71 Aligned_cols=210 Identities=26% Similarity=0.383 Sum_probs=178.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.++|.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 45999999999999999999999999999999999999987 9999999999876544 3679999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+....... .. ..+....++.+++.+||++..+..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~------~~------------------------~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PN------------------------AAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccC------CC------------------------HHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 9999997643210000 00 0012234678899999988776554 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 345566688999999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 158
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=336.37 Aligned_cols=214 Identities=27% Similarity=0.364 Sum_probs=181.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+|+||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67888887763 24699999999999999999999999999999999998663 4799999998753
Q ss_pred c----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 Q----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
. ...++.++|++|++.+++.+||.||+.+...++. ....++.+..++++++.+++.+..+.. +..||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1134569999999988888999999987543321 123344556789999999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++...+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 57889999999985 7899888
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 159
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.6e-36 Score=335.86 Aligned_cols=214 Identities=24% Similarity=0.322 Sum_probs=178.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 905 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 905 (1206)
+.++||++.++ +..+|+|+||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 57889988763 235999999999999999999999999999999999976532 12799999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCCC
Q 000971 906 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGLP 976 (1206)
Q Consensus 906 ~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~~ 976 (1206)
+... ...++.++|++|++.+++ .|++||+.+....+. ....++..+.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 224567999999988888 999999988654331 123344556789999999997 555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999876 499999999987 57788999999996
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 789988874
No 160
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.6e-37 Score=305.02 Aligned_cols=201 Identities=25% Similarity=0.393 Sum_probs=173.2
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~Etl~ 248 (1206)
.+++.|++||+++|+|||||||||||+.|+|+..|. +|+|.+||.+.....| +|-++.++|+.++|..|||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999997 9999999999987665 578999999999999999999999
Q ss_pred HHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhh
Q 000971 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1206)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1206)
++.. ++-+ +.. +....++.++...||..+.+.+.+ .|||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8743 1111 111 112346778999999999887665 699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000971 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1206)
Q Consensus 329 kkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1206)
||||++||+|+.+.+|++||||+|+||+.-+.+....+.+++...+.|+++ ++|..+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998876666666 5555578899999999999999999999
Q ss_pred hHHHH
Q 000971 409 RELVL 413 (1206)
Q Consensus 409 ~~~~~ 413 (1206)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 161
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=334.05 Aligned_cols=206 Identities=29% Similarity=0.381 Sum_probs=172.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999987 9999999998765432 35699999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.++......... .+....++.+++.+||.+..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCChh-
Confidence 999999999986432110000 0112235678899999876666554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|..+++..+||+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 699999999999999999999999999999999999999999999876533 455566788888899999999999
Q ss_pred cCCeEEEecChHHH
Q 000971 399 SDGQIVYQGPRELV 412 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1206)
++|++++.|+++++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999998765
No 162
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=343.68 Aligned_cols=217 Identities=21% Similarity=0.328 Sum_probs=180.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 78999999885210 0123599999999999999999999999999999999998764 4799999998763
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
. ..+++.+|||+|++ .+++ .||.||+.|..... ..+.++..+.+.++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 13456799999986 3444 59999998864322 234455567789999999996 566665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999975 4999999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999874
No 163
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=337.17 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=177.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|++++++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 489999998874 23599999999999999999999999999999999998663 479999998765
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
. .+++.++|++|++.+++.+||+||+.+... . ..+..+.++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235679999999988888999999987421 0 12345788999999988777663 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|++||++|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+...+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999987 57788999999985 788887764
No 164
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=353.15 Aligned_cols=206 Identities=23% Similarity=0.326 Sum_probs=178.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999999876544 4689999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
.||+.|+.+.++... .+....++.+++.+||.+..+..+ ..
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999865432100 012234678899999987776554 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999998876544 45666688899999999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 165
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-36 Score=330.76 Aligned_cols=193 Identities=25% Similarity=0.369 Sum_probs=164.0
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCC-CCCCC
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 929 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~-~~~~~ 929 (1206)
+.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999998653 47999999986532 234567899999974 35678
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000971 930 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1009 (1206)
Q Consensus 930 Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTs 1009 (1206)
|++||+.+....+ .......+..++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 1223344556889999999987777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 1010 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 1010 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999864
No 166
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=318.76 Aligned_cols=206 Identities=27% Similarity=0.326 Sum_probs=177.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC----ccceEEEecCCC--CCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHD--NHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1206)
.++|+|||++|.+||.++|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+|++ .+.
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 36999999999999999999999999999999999999998 999999998776542 246789999996 578
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
|..||++.|.-+.+..+... .+..+.++|+.+||+...- +
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~ 136 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----D 136 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----h
Confidence 99999999987655433211 1122667899999986432 3
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+.+..|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||+|+||
T Consensus 137 R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 137 RRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred cCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeee
Confidence 56668999999999999999999999999999999999999999999999876 45677777999999999999999999
Q ss_pred cCCeEEEecChHHHHH
Q 000971 399 SDGQIVYQGPRELVLE 414 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1206)
++|++++.+|.+++..
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999998864
No 167
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=342.52 Aligned_cols=216 Identities=23% Similarity=0.303 Sum_probs=182.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||++.++.. ..+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37899999887421 123599999999999999999999999999999999998764 489999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998865332 2345555667899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 45 57999999985 79998
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 168
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.8e-36 Score=346.36 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=176.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875422 1356999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|.++..+... .+....++.+++.+||.+..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765433110 0112245678999999988877665
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4556668888899999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 169
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-36 Score=304.92 Aligned_cols=199 Identities=27% Similarity=0.396 Sum_probs=175.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
..+|+|||+.|++|||+.|+||||||||||||.|.+...|+ .|+|.+||+++..... +|.+|+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999998 9999999999875433 47899999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+..||.||+.|+.+..|... .+.+..+.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988765322 13455678899999999988754
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+..|||||+|||+||||++.+|++|+-||||-.||+..+.+|++.+.++.. .+|+|+..+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 457999999999999999999999999999999999999999999998754 4677777889988888888899999
Q ss_pred cCCeEEEec
Q 000971 399 SDGQIVYQG 407 (1206)
Q Consensus 399 ~~G~iv~~G 407 (1206)
++|+++...
T Consensus 211 ~~Grl~~d~ 219 (223)
T COG2884 211 EDGRLVRDE 219 (223)
T ss_pred eCCEEEecc
Confidence 999998754
No 170
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-36 Score=329.02 Aligned_cols=211 Identities=25% Similarity=0.329 Sum_probs=173.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++.. ...+.+|+++||+|++|++++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 5678888877411 0124699999999999999999999999999999999998663 4899999998753
Q ss_pred cc---c---cc-ceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 000971 909 QE---T---FA-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1206)
Q Consensus 909 ~~---~---~~-~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 981 (1206)
.. . ++ +.++|++|++.+++.+||+||+.+....+. ....+..+.+.++++.++|.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 22 568999999988889999999988654331 223334456889999999988777763 579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 982 SgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
|||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998764 899999999986 34 55799999986 565
Q ss_pred E
Q 000971 1061 I 1061 (1206)
Q Consensus 1061 ~ 1061 (1206)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 171
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=315.67 Aligned_cols=207 Identities=25% Similarity=0.379 Sum_probs=174.3
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHIG 239 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1206)
..+||++||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++..++. +-++||||....||
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 468999999999999999999999999999999999999986 99999999999988775 46899999999999
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-CcccccccccC
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVGD 318 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~ 318 (1206)
.|||.|||..++....... . .....|.+.+.|= |....+..-|
T Consensus 92 ~LTVeENL~~g~~~~~~~~-~----------------------------------~~~~~e~v~~lFP~Lker~~~~aG- 135 (237)
T COG0410 92 RLTVEENLLLGAYARRDKE-A----------------------------------QERDLEEVYELFPRLKERRNQRAG- 135 (237)
T ss_pred hCcHHHHHhhhhhcccccc-c----------------------------------ccccHHHHHHHChhHHHHhcCccc-
Confidence 9999999998764322100 0 0000233333332 4444455555
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.|||||+|-++|||||+++|++|+|||||.||-|.-..+|.+.|+++.+. ++.+|+.+.|....+.+++|+.+||
T Consensus 136 ----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 136 ----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred ----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEE
Confidence 59999999999999999999999999999999999999999999998754 4577778999999999999999999
Q ss_pred cCCeEEEecChHHHHH
Q 000971 399 SDGQIVYQGPRELVLE 414 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1206)
.+|++++.|+.+++.+
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999998753
No 172
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.5e-36 Score=335.81 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=181.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++ .+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 36788988774 23699999999999999999999999999999999998763 4899999998653
Q ss_pred c----------------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000971 909 Q----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL 972 (1206)
Q Consensus 909 ~----------------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 972 (1206)
. ..+++.++|++|++.+++..|+.||+.+..... .....+..++.+.++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123444556789999999998877765
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeE
Q 000971 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 973 ~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
+..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999987 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 789988874
No 173
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=340.16 Aligned_cols=213 Identities=22% Similarity=0.306 Sum_probs=179.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ +++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 56888888763 123599999999999999999999999999999999998663 4799999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 909 Q----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~----~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
. ...++.+||++|++. .+...|+.||+.|..... ..+.++.++.++++++.++|.+..++.+ ..||+
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 233567999999975 356689999998865332 2334455567899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||+||+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 45 66999999986 789999
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 174
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.4e-36 Score=330.95 Aligned_cols=212 Identities=26% Similarity=0.384 Sum_probs=178.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|++++++ ++.+|+|||++|++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 56788887763 24699999999999999999999999999999999998663 4799999998653
Q ss_pred cc--cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~~--~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
.. ...+.++|++|++.+++.+|++||+.+.+..+ ....+...+.+.++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22346899999998888999999998765433 1233444566889999999988777664 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++. .+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 5899999999987 354 5999999985 78888887
Q ss_pred C
Q 000971 1066 L 1066 (1206)
Q Consensus 1066 ~ 1066 (1206)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 175
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=333.95 Aligned_cols=212 Identities=22% Similarity=0.321 Sum_probs=178.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-+.++|+++.++ .+.+|+++||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 378999998763 23699999999999999999999999999999999998663 479999999875
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCCCCCC
Q 000971 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LS 982 (1206)
... ..++.++|++|++.+++.+||.||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 13457999999998888899999998754221 1222344577788888 476655554 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 68899999999986 79999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9985
No 176
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-36 Score=352.03 Aligned_cols=206 Identities=26% Similarity=0.384 Sum_probs=176.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45999999999999999999999999999999999999987 9999999999865443 3679999999999999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+.+..+... .+....++.+++.+||++..+..++ .
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~~-----~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKPK-----A 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999999765332100 0112346778999999887776554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886533 45566678888899999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
++.|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 177
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=347.02 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=176.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 9999999999875432 35799999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.|.....+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754332100 011224567899999988777654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 455666888888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 178
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=304.64 Aligned_cols=201 Identities=25% Similarity=0.392 Sum_probs=179.3
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYE 933 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e 933 (1206)
..+|+|||+.|.+||.++++||||||||||||+++|..++ ..|.|.+||.++....-. -|.|+|++.++|.+||.+
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPgae--rgvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGAE--RGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCcc--ceeEeccCccchhhHHHH
Confidence 3599999999999999999999999999999999998874 489999999987654322 489999999999999999
Q ss_pred HHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000971 934 SLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1013 (1206)
Q Consensus 934 ~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~ 1013 (1206)
|+.|+..++ .+++.++.+.+.+.+..+||.+..++.+ -.||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4678899999999999999999888874 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecC-cEEEEEcCCC
Q 000971 1014 RAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG-GQEIYVGPLG 1067 (1206)
Q Consensus 1014 ~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~g-g~~~~~g~~~ 1067 (1206)
-+++.++++|-++.+ +|+.++++||+.. +..-.++++++|+.| |+++..=+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999999875 5999999999987 455568999999865 6788776653
No 179
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.2e-36 Score=345.41 Aligned_cols=229 Identities=21% Similarity=0.244 Sum_probs=185.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-++++||+.+++...+........+...+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 488999998875321000000001235799999999999999999999999999999999998764 479999999876
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 908 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 908 ~~~------~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 578899999999886443211 234556677889999999995 455665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..||||||||++||+||+.+|++|+|||||+|||..++..|++.|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999986 46778999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 180
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=341.25 Aligned_cols=219 Identities=24% Similarity=0.307 Sum_probs=180.7
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.+..+. ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367899998874110 0013599999999999999999999999999999999998764 489999999875
Q ss_pred Cc-------ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 908 KQ-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 908 ~~-------~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
.. ...++.+||++|++. .+..+||.||+.|....+ ....++..++++++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457999999963 233589999998765332 233455566789999999997 5667663
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.||++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999987 57889999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89998874
No 181
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.9e-36 Score=328.44 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=178.0
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ++.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRP--TSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEeccc
Confidence 5678877663 24699999999999999999999999999999999998653 48999999987543
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHH
Q 000971 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1206)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl 989 (1206)
.. .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.++|.+..+..+ ..||+|||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2468999999988888999999987654331 11 235788999999998777763 47999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 990 ~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999987 57789999999985 7899999864
No 182
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=336.12 Aligned_cols=217 Identities=22% Similarity=0.267 Sum_probs=180.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+++|+++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEEC
Confidence 478999998763 24699999999999999999999999999999999998663 489999999875
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000971 908 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EVDSETRKMFIEEVMELVELKPLIQS 971 (1206)
Q Consensus 908 ~~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 971 (1206)
... . .+..++|++|++.+++.+||+||+.+....... . .....+....++++++.++|.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233489999999999999999999886431110 0 00112234568889999999887777
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCe
Q 000971 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDE 1050 (1206)
Q Consensus 972 ~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~ 1050 (1206)
.+ ..||||||||++||++|+.+|++|||||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 64 579999999999999999999999999999999999999999999999775 899999999987 57788999
Q ss_pred EEEEecCcEEEEEcCC
Q 000971 1051 LFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1051 v~ll~~gg~~~~~g~~ 1066 (1206)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 789998885
No 183
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5e-36 Score=332.90 Aligned_cols=219 Identities=21% Similarity=0.257 Sum_probs=176.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35788888773 24699999999999999999999999999999999997411135799999998754
Q ss_pred cc---cc-cceEEEeecCCCCCCCCCHHHHHHHhhhhcCCC----CCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 000971 909 QE---TF-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~~---~~-~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 979 (1206)
.. .. +..++|++|++.+++.+|++|++.+........ ..+.++..+.+.++++.++|. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 11 234899999999999999999998754322110 112233345788999999997 45555432 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHh-cCeEEEEecCc
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1058 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~-~d~v~ll~~gg 1058 (1206)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877999999999987 46666 799999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 89998874
No 184
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=328.87 Aligned_cols=207 Identities=28% Similarity=0.408 Sum_probs=180.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCC----CCCccceEEEecCCC-CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----EFVPERTAAYISQHD-NHIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1206)
..+|+|+|+.|++|+.++|+||||||||||+++|+|.+.|. +|.|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999997 899999999865 223357899999995 4577
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.-||.|.+.|+.+..+... ++...+++.+++.+||.+.++..
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~---- 135 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRP---- 135 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCC----
Confidence 7899999999987665421 12345678899999999987754
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
+..|||||||||+||.+|+.+|++++|||||+|||+....++++.++++.. .++.+||.++|+...+..++|++++|+
T Consensus 136 -p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 -PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred -ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 445566668999999999999999999
Q ss_pred CCeEEEecChHHHHH
Q 000971 400 DGQIVYQGPRELVLE 414 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1206)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877653
No 185
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=332.39 Aligned_cols=213 Identities=24% Similarity=0.324 Sum_probs=180.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 67899988774 23599999999999999999999999999999999998763 4799999998642
Q ss_pred ---------cccccceEEEeecCCCCCCCCCHHHHHHHh-hhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 909 ---------QETFARISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 909 ---------~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
....++.++|++|++.+++.+||.||+.+. .... ....++....+.++++.+|+.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 012345789999999999999999999753 2221 1223344567899999999988777763
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777999999999987 56778999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 89998874
No 186
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=338.92 Aligned_cols=214 Identities=24% Similarity=0.354 Sum_probs=181.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|++++++. .+.+|+||||++++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 678999988731 13499999999999999999999999999999999998663 4899999998754
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 Q---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
. ..+++.+||++|++. .+...||.||+.+..... ..+.+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 234567899999974 334579999998765322 2344555567899999999998877764 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999987 57789999999986 689999
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 985
No 187
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-36 Score=334.41 Aligned_cols=217 Identities=24% Similarity=0.267 Sum_probs=179.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.++++||++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478999998874 235999999999999999999999999999999999986542 3489999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc----cccccCC
Q 000971 905 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGL 975 (1206)
Q Consensus 905 ~~~~-----~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 975 (1206)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 123456799999999999999999999886543211 11233445568899999998532 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 188
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-36 Score=333.13 Aligned_cols=217 Identities=23% Similarity=0.280 Sum_probs=179.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 378899988763 246999999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc----cccccCCCC
Q 000971 905 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGLPG 977 (1206)
Q Consensus 905 ~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~~~ 977 (1206)
.++.. ..+++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.++|.+. .++.
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87532 23456799999999888899999999886533211 11233445678899999998642 3333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
+..||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999864 899999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 788888875
No 189
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-36 Score=334.51 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=177.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+||||+|++||++||+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588999998763 245999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.+||++|++.+++ +|++||+.|....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988887 89999998865432 1233444556889999999853 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 190
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-36 Score=333.88 Aligned_cols=215 Identities=22% Similarity=0.247 Sum_probs=177.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+||||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999998874 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 975 (1206)
.++.. ..+++.+||++|++.+++ +||+||+.|...... .......++.+.++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999988774 899999988653321 112333456688899999884 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 191
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-36 Score=334.67 Aligned_cols=213 Identities=25% Similarity=0.355 Sum_probs=179.5
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+||||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcc
Confidence 67889988774 24699999999999999999999999999999999998653 4799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
. ..+++.++|++|++.+++.+||+||+.+..... ....+..+..++++++.++|.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223456899999988878899999998754221 1122333456889999999988777764 5799999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 986 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 986 rqrl~ia~aL~------~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|.|||+++|++. ++...+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 66999999999987 57789999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 192
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-36 Score=313.97 Aligned_cols=212 Identities=26% Similarity=0.378 Sum_probs=178.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||+..| ++.++|+|||+++++||+++|+|||||||||||++|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 6778887655 346899999999999999999999999999999999998763 3799999999875
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC-CccccccccCCCCCCCCCH
Q 000971 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-LKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..++-++||||....||.+||+|||..++..+.. ++.....++++.+.+= |.+.+++..| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456799999999999999999999987655422 1122222677777764 6667777644 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||.|+|||||+.+|++|+|||||.||-|.-...|.++|++++++ |.||+++-+.-. ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999976 789999988865 46789999999985 79999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 218 ~G~~ 221 (237)
T COG0410 218 SGTA 221 (237)
T ss_pred ecCH
Confidence 9985
No 193
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=338.48 Aligned_cols=215 Identities=25% Similarity=0.311 Sum_probs=181.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-+.++||++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 3789999988741 123599999999999999999999999999999999998764 489999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++.++.+.++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 223567999999973 566789999998865432 2234455667899999999998888774 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 899999999986 35 46999999985 78999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 194
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-36 Score=326.01 Aligned_cols=208 Identities=25% Similarity=0.329 Sum_probs=172.6
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ++. .|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCc
Confidence 5788887763 122 299999999999999999999999999999998763 47999999987543
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..++.+||++|++.+++.+|++||+.+....+. .. .+..++.++++++.++|.+..++.+ ..||+|||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHH
Confidence 1 234679999999999999999999987543211 11 1234556899999999988777764 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999998754 899999999986 57788999999985 6777643
No 195
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.4e-36 Score=330.80 Aligned_cols=215 Identities=26% Similarity=0.310 Sum_probs=179.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+|+||+|++|++++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 67888887763 24699999999999999999999999999999999998653 4799999998654
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-----CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.. ..++.++|++|++.+++.+||+||+.+....... .....+..+..++++++.+++.+..+..+ .
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1234699999999999999999999875431100 00112334567899999999988777664 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999875 799999999987 57788999999985 78
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888874
No 196
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=335.01 Aligned_cols=218 Identities=23% Similarity=0.292 Sum_probs=182.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||+++++ .+.+|+||||++++|++++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 588999998874 24699999999999999999999999999999999998763 479999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.++|++|++.+++..|++|++.+...-..+ .....+..+..++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 22345689999999888889999999875311100 0001123345688999999998877776 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999987 58899999999985 78999
Q ss_pred EcCCC
Q 000971 1063 VGPLG 1067 (1206)
Q Consensus 1063 ~g~~~ 1067 (1206)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 98853
No 197
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.4e-36 Score=334.59 Aligned_cols=220 Identities=27% Similarity=0.353 Sum_probs=181.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1206)
-+.++||++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478899988763 246999999999999999999999999999999999986543 236999999986
Q ss_pred CCc--------ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000971 907 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLV 973 (1206)
Q Consensus 907 ~~~--------~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~ 973 (1206)
+.. ...++.++|++|++.+++.+||+||+.+......+ .....++.+..++++++.++|.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999989999999999875321100 01112334567899999999988777764
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEE
Q 000971 974 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELF 1052 (1206)
Q Consensus 974 g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ 1052 (1206)
..||+|||||++|||||+.+|+||+|||||+|||..++..+.+.|+++.++ |.|||+++|++. .+...+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999764 899999999987 5788999999
Q ss_pred EEecCcEEEEEcCCC
Q 000971 1053 LMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1053 ll~~gg~~~~~g~~~ 1067 (1206)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7889998864
No 198
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-36 Score=333.59 Aligned_cols=217 Identities=25% Similarity=0.339 Sum_probs=180.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+||||++++|++++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhH
Confidence 67889988763 24699999999999999999999999999999999997653 4799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
. ..+++.++|++|+..+++.+|+.||+.++...... .....+...+.++++++.++|.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345689999998888889999999875311000 01111233456889999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998877999999999987 67889999999985 6888888
Q ss_pred CCC
Q 000971 1065 PLG 1067 (1206)
Q Consensus 1065 ~~~ 1067 (1206)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 754
No 199
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.2e-36 Score=343.95 Aligned_cols=206 Identities=25% Similarity=0.370 Sum_probs=176.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1206)
+.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999997 9999999998764322 467999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|.....+... .+....++.+++.+||.+..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999997554332100 0011234567899999988887765
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.+..++.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4556668888999999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
++++|+++++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998764
No 200
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=332.39 Aligned_cols=217 Identities=18% Similarity=0.250 Sum_probs=179.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|||++|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 378899998874 236999999999999999999999999999999999976532 2489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.+||++|++.+++.+||+||+.+....+. ....+..++.++++++.++|.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999988999999999987654331 1123444567889999999853 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5778999999997
Q ss_pred c-----CcEEEEEcCC
Q 000971 1056 R-----GGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~-----gg~~~~~g~~ 1066 (1206)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4799999875
No 201
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=331.13 Aligned_cols=220 Identities=23% Similarity=0.304 Sum_probs=177.5
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~ 903 (1206)
..+.++||++++. .+.+|+|+||+|++|++++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3589999998874 2359999999999999999999999999999999999642 1 1347999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
|.++.. ..+++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987532 123567999999988887 599999988654331 112233456688899999986422111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 5799999999999999999999999999999999999999999999985 4799999999987 57788999999986 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 88888874
No 202
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=336.54 Aligned_cols=213 Identities=24% Similarity=0.360 Sum_probs=178.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 56889988773 23599999999999999999999999999999999997663 4899999998753
Q ss_pred c-----ccccceEEEeecCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 Q-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~~-~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
. ..+++.+||++|++.. ....|+.||+.+....+ ....++..+.++++++.++|.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234679999998753 34568999998764332 2233444556889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999987 57788999999985 78999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8874
No 203
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-36 Score=334.57 Aligned_cols=217 Identities=29% Similarity=0.376 Sum_probs=180.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+|+||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 488999998773 24699999999999999999999999999999999998653 479999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23455799999998888889999999875321110 00111233456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||+||+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999987 57789999999985 78898
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 204
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-35 Score=333.52 Aligned_cols=223 Identities=23% Similarity=0.297 Sum_probs=180.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++.....+ ..+.+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 67899998874210000 01135799999999999999999999999999999999998663 4799999998754
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 000971 909 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 979 (1206)
.. .+++.++|++|++ .+.+.+||+|++.+...... .......++.+.++++.++|. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1345799999996 46678999999976542111 122334456789999999996 566665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+...+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999987 57778999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 205
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=330.33 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=176.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCC---CCCeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 904 (1206)
.++++|+++.+. .+.+|+||||++++||++||+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 478899998763 246999999999999999999999999999999999952 2212479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ..+++.++|++|++.+++ .|+.||+.+....+. ....+...+.++++++.++|.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 699999987654331 112233455688999999986532111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999987 57788999999985 78
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999975
No 206
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=320.25 Aligned_cols=196 Identities=30% Similarity=0.574 Sum_probs=163.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1206)
.++|+||+|.|+.+ .+++.+|+++||+|++|+++||+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58999999999743 12457999999999999999999999999999999999986532 458999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 907 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 907 ~~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
... ...++.++|++|++.+++.+||+||+.+.+... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753211 2222 3579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 678777766643367889999999986 788775
Q ss_pred c
Q 000971 1064 G 1064 (1206)
Q Consensus 1064 g 1064 (1206)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 207
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=332.38 Aligned_cols=218 Identities=21% Similarity=0.267 Sum_probs=179.4
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEE
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNIT 901 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~ 901 (1206)
.+..+.++|+++.++ ...+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345689999998874 2359999999999999999999999999999999999754 1 13579999
Q ss_pred EcCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000971 902 ISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSL 972 (1206)
Q Consensus 902 i~g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 972 (1206)
++|.++.. ..+++.++|++|++.+++ .|++||+.+...... ..+.++.+++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987531 234567999999988777 899999987653221 1233444567899999999853 23333
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEE
Q 000971 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF 1052 (1206)
Q Consensus 973 ~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ 1052 (1206)
+..||||||||++||+||+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999985 4789999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000971 1053 LMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1053 ll~~gg~~~~~g~~ 1066 (1206)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 789998874
No 208
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=349.34 Aligned_cols=202 Identities=24% Similarity=0.295 Sum_probs=175.3
Q ss_pred ceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc---c----ccceEEEeecCCCC
Q 000971 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIH 925 (1206)
Q Consensus 853 ~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~~ 925 (1206)
...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+|||+|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 34689999999999999999999999999999999998764 479999999876421 1 13469999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000971 926 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1005 (1206)
Q Consensus 926 ~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LD 1005 (1206)
++.+||+||+.|...++. ...++.++.+.++++.++|.+..++.+ ..||||||||++|||||+.+|+|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 234455667899999999998888774 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1006 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 4899999999987 57889999999985 789998875
No 209
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=324.61 Aligned_cols=200 Identities=29% Similarity=0.427 Sum_probs=167.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999987 9999999998765332 3579999999889999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.++....+... .+....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 999998643221100 0011235668899999877776554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|...++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876533 45566678888889999999999999999
Q ss_pred EEec
Q 000971 404 VYQG 407 (1206)
Q Consensus 404 v~~G 407 (1206)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 210
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.6e-35 Score=325.48 Aligned_cols=213 Identities=25% Similarity=0.364 Sum_probs=176.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++.. .....+|+|+|++|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 47899999887421 0113599999999999999999999999999999999998663 479999999875
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 908 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 908 ~~~~------~-~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
.... . ++.++|++|++.+++.+|+.||+.+....+. ....+..+++.++++.++|.+..++.+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 2469999999988899999999987654321 223445567899999999988777663 57
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998765 899999999987 34 56999999985 67
Q ss_pred EEE
Q 000971 1060 EIY 1062 (1206)
Q Consensus 1060 ~~~ 1062 (1206)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 654
No 211
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=336.90 Aligned_cols=217 Identities=23% Similarity=0.334 Sum_probs=177.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++... ...+.+|+||||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67899998874210 0013599999999999999999999999999999999998664 4899999998753
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 000971 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 978 (1206)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~ 978 (1206)
. ..+++.++|++|++ .+++ .||+||+.|..... ....++..+.++++++.++|.+ ..++. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 22456789999986 3444 69999998764332 1233444566889999999973 55555 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888874
No 212
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=324.98 Aligned_cols=205 Identities=29% Similarity=0.380 Sum_probs=172.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 999999998775321 1356999999998999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 9999998654322100 0112245678999999887776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.... +++|+.++|..+++..++|+|++|.+|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999886532 4556668888889999999999999999
Q ss_pred EEEecChHHH
Q 000971 403 IVYQGPRELV 412 (1206)
Q Consensus 403 iv~~G~~~~~ 412 (1206)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 213
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-36 Score=295.32 Aligned_cols=197 Identities=25% Similarity=0.376 Sum_probs=171.5
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc-------cccceEEEeecCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-------TFARISGYCEQNDI 924 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~q~~~ 924 (1206)
+...||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|+++... ...+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 457899999999999999999999999999999999998774 489999999986431 13467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000971 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1206)
Q Consensus 925 ~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~L 1004 (1206)
+.|++|..||+.....++.... ........+.|+.+||.+..+.++ ..|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999998888775322 223345788999999998888774 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 1005 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||-+||..+...|.++|-.+.++ |.|.|++||||. +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999988754 999999999986 6788999999986 6765
No 214
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.7e-36 Score=370.16 Aligned_cols=207 Identities=29% Similarity=0.420 Sum_probs=174.4
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1206)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||++++..++ ++.++||+|++.+|. -|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 5899999999999999999999999999999999999998 9999999999988776 478999999886664 59
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.++.. +.+.+..+.|+...+. . -.+..++..+||.||+.+.
T Consensus 563 I~eNi~l~~p-------------------------~~~~e~i~~A~~~ag~-----~---~fI~~lP~gy~t~v~E~G~- 608 (709)
T COG2274 563 IRENIALGNP-------------------------EATDEEIIEAAQLAGA-----H---EFIENLPMGYDTPVGEGGA- 608 (709)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCc-----H---HHHHhcccccccccccCCC-
Confidence 9999998642 2222333333332221 1 1245688999999997665
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++. .++|+|+..|.+ .+.+.||+|+||++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 899999999999999999999999999999999999999999999875 356766655544 5788999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
++.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999876
No 215
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=334.85 Aligned_cols=214 Identities=28% Similarity=0.351 Sum_probs=179.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.+. +.+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 57889988873 123599999999999999999999999999999999997663 4799999998753
Q ss_pred c-----ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
. ...++.++|++|++. .+...||.||+.|..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 333479999998754321 2234455567889999999998888764 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999986 78999
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 216
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=339.47 Aligned_cols=221 Identities=18% Similarity=0.240 Sum_probs=181.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC-C-eeEEEEEEcCc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-G-YITGNITISGY 905 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~ 905 (1206)
.++++||++.+..+ .+...+|+||||+|++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 37889999887522 1125699999999999999999999999999999999997642 2 35899999998
Q ss_pred cCCcc---c----ccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc---ccccc
Q 000971 906 PKKQE---T----FARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL---IQSLV 973 (1206)
Q Consensus 906 ~~~~~---~----~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~~ 973 (1206)
++... . .++.++||+|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+. .+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~- 150 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY- 150 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC-
Confidence 76431 1 123699999998 47888999988865543221 23445566789999999999753 3443
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEE
Q 000971 974 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELF 1052 (1206)
Q Consensus 974 g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ 1052 (1206)
+..|||||||||+||+||+.+|+|||+||||+|||+.++..|++.|+++.+ .|.|||++||+++ .+.+.+|+|+
T Consensus 151 ----p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~ 225 (326)
T PRK11022 151 ----PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKII 225 (326)
T ss_pred ----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999976 4999999999987 4678899999
Q ss_pred EEecCcEEEEEcCC
Q 000971 1053 LMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1053 ll~~gg~~~~~g~~ 1066 (1206)
+|.+ |+++..|+.
T Consensus 226 vm~~-G~ive~g~~ 238 (326)
T PRK11022 226 VMYA-GQVVETGKA 238 (326)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 799999985
No 217
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=339.67 Aligned_cols=225 Identities=23% Similarity=0.255 Sum_probs=184.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.|+.+||++.+....... ...+...+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478999998875321100 001135799999999999999999999999999999999998663 479999999876
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 000971 908 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 978 (1206)
Q Consensus 908 ~~~------~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~ 978 (1206)
... .+++.+|||+|++ .+.|.+||.+++.+..... .....++.++.+.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 5788999999987654332 12345556678999999999964 55665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..||||||||++|||||+.+|+|||+||||++||..++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 218
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-36 Score=305.01 Aligned_cols=207 Identities=30% Similarity=0.428 Sum_probs=176.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1206)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+++|||.+++++.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999988764 4568999998776667
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+|-+.++..-.+.+.. ..+...+++..|...++.+.+.. ..
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~R-----~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAGR-----DY 133 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhcc-----ch
Confidence 999999998654322110 01223456778888888887753 34
Q ss_pred ccCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 322 RGISGGERKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~------~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
+.|||||||||.+||.|+. .+++||||||||.||......+++..|++++. + ..|+.++|+..-+..++|+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhee
Confidence 5799999999999999974 44689999999999999999999999999974 3 56666889999999999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999876
No 219
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=325.94 Aligned_cols=213 Identities=26% Similarity=0.392 Sum_probs=181.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. .+.+|+|+|++++||++++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~ 65 (232)
T cd03300 1 IELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDIT 65 (232)
T ss_pred CEEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 35788888763 24699999999999999999999999999999999998764 4799999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
.. ..++.+||++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~q 137 (232)
T cd03300 66 NLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQ 137 (232)
T ss_pred cCChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHH
Confidence 32 124578999999998888999999987654331 223444557889999999998877763 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 138 rl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 138 RVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999998765 899999999986 57888999999985 788888863
No 220
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-35 Score=332.34 Aligned_cols=217 Identities=27% Similarity=0.389 Sum_probs=179.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 56788887763 24699999999999999999999999999999999997653 4799999998754
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
. ...++.++|++|++.+++.+||+||+.+....... ......+..+.+.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 22345689999998777889999999875211000 00111233456889999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877999999999997 57789999999985 6889988
Q ss_pred CCC
Q 000971 1065 PLG 1067 (1206)
Q Consensus 1065 ~~~ 1067 (1206)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 753
No 221
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=317.33 Aligned_cols=190 Identities=57% Similarity=0.937 Sum_probs=162.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++.+ ..++.+|+|+|+++++|++++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47899999887521 012469999999999999999999999999999999999643224589999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
. ..+++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 334567999999998889999999998743110 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|++||+||+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++.++...+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998744678899999998657898865
No 222
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=335.32 Aligned_cols=218 Identities=25% Similarity=0.387 Sum_probs=177.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC-CC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN-HI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1206)
+++|+|||++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999986532 1357999999863 44
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc--ccccccc
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE--VCADTMV 316 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1206)
..+||+||+.|+....+.. ..+....++++++.+||. +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccCC-
Confidence 5689999999865322110 011223467789999996 455544
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
++.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|...++..+||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999998653 35566668888889999999999
Q ss_pred EEcCCeEEEecChHHHHH---HHHhcCCCCCC
Q 000971 397 LLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1206)
+|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23345555543
No 223
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=332.56 Aligned_cols=208 Identities=25% Similarity=0.334 Sum_probs=174.9
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d 235 (1206)
..+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3467999999999999999999999999999999999999987 9999999998765322 24699999999
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000971 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1206)
.+++.+||+||+.+.....+... .+....++.+++.+||.+..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 89999999999998654322100 00112356788999998877766
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
++ .|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++++.. +.+|+.++|..+++.+++|+|
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEE
Confidence 54 699999999999999999999999999999999999999999999886533 445556778888899999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 224
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-35 Score=327.19 Aligned_cols=211 Identities=25% Similarity=0.319 Sum_probs=174.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.++ ++.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 35788887763 24699999999999999999999999999999999998763 4799999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcC-CccccccccCCCCCCCCCH
Q 000971 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-LKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..++.++|++|++.+++.+|+.||+.+....+. .. ..+.++++++.++ +.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 21 124568999999999999999999987654321 11 1234577788876 55555655 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|.+ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998874 899999999986 57778999999985 78999
Q ss_pred EcCCC
Q 000971 1063 VGPLG 1067 (1206)
Q Consensus 1063 ~g~~~ 1067 (1206)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88853
No 225
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.2e-35 Score=344.82 Aligned_cols=204 Identities=21% Similarity=0.303 Sum_probs=176.7
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCc----cCCc---cc---c-cceEEEee
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY----PKKQ---ET---F-ARISGYCE 920 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 920 (1206)
+...+|+||||+|++||+++|||+||||||||+++|+|...+ .+|+|.++|. ++.. .. + ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 456799999999999999999999999999999999998764 4799999995 2211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCc
Q 000971 921 QNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1000 (1206)
Q Consensus 921 q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~ 1000 (1206)
|++.++|.+||+||+.|+...+ ..+.+++++.+.++++.+||.+..+..+ ..||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2345566678899999999998888774 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1001 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1001 iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999765 999999999987 57899999999985 7999999863
No 226
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-35 Score=321.85 Aligned_cols=209 Identities=22% Similarity=0.306 Sum_probs=174.9
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++||++.++ .+++|+|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEccc
Confidence 5778877663 145799999999999999999999999999999998764 47999999987542
Q ss_pred -ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 910 -ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 910 -~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
...++.++|++|++.+++.+|+.||+.+...... . .....+..++++++.++|.+..++.+ ..||+|||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHH
Confidence 2345679999999999999999999986532211 1 11223456889999999988777763 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcC
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~ 1065 (1206)
++||++|+.+|++|+|||||+|||..++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|+
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 99999999999999999999999999999999999998765 899999999986 56788999999985 78888775
No 227
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=331.36 Aligned_cols=216 Identities=23% Similarity=0.275 Sum_probs=178.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 904 (1206)
.+.++||++.++ .+.+|+|+|++|++|++++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 589999998874 24699999999999999999999999999999999997643 13579999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc----cccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 975 (1206)
.++.. ..+++.+||++|++.+++. ||.||+.|....+.. .....+..+.++++++.++|.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2345678999999887774 999999886543311 11223345568899999999642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ +.|||+++|+++ .+...+|++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 228
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=330.24 Aligned_cols=224 Identities=22% Similarity=0.263 Sum_probs=181.6
Q ss_pred CCCCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEE
Q 000971 823 PFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGN 899 (1206)
Q Consensus 823 ~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~ 899 (1206)
|..+..+.++|++++++ .+.+|+|||+++++||++||+|||||||||||++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445689999998874 24699999999999999999999999999999999997642 135899
Q ss_pred EEEcCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccC
Q 000971 900 ITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG 974 (1206)
Q Consensus 900 i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g 974 (1206)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..+..+.++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567999999988877 69999998864321 112334455678899999999643222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 975 ~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
. .+..||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2 246899999999999999999999999999999999999999999999985 4799999999987 578899999999
Q ss_pred ecCcEEEEEcCC
Q 000971 1055 KRGGQEIYVGPL 1066 (1206)
Q Consensus 1055 ~~gg~~~~~g~~ 1066 (1206)
++ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999885
No 229
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=332.87 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=180.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++. +.+.+|+|||+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4889999987731 124699999999999999999999999999999999998763 479999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.+||++|++. .++.+||+||+.+..... ....++....+.++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764322 1233445567899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++ ..+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 599999999987 34 47999999985 78888
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 230
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=363.48 Aligned_cols=221 Identities=21% Similarity=0.293 Sum_probs=186.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-++++|++++++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378999998873 2469999999999999999999999999999999999866433589999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
... ..++.+|||+|++.+++.+||+||+.|....+.....+.++..+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 432 124569999999988899999999988654321111223344567899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. .+...+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999987 57788999999985 789999
Q ss_pred cCCCc
Q 000971 1064 GPLGR 1068 (1206)
Q Consensus 1064 g~~~~ 1068 (1206)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98753
No 231
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.3e-36 Score=327.43 Aligned_cols=198 Identities=24% Similarity=0.378 Sum_probs=167.6
Q ss_pred eecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHH
Q 000971 857 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 936 (1206)
Q Consensus 857 L~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~ 936 (1206)
|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5799999999999999999999999999999998763 4899999998764322 12489999999999999999998
Q ss_pred HhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000971 937 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1016 (1206)
Q Consensus 937 ~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~ 1016 (1206)
+......+ ....++.++.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2333444566889999999988777764 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1017 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1017 ~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999987 57888999999985 788887764
No 232
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=326.95 Aligned_cols=209 Identities=28% Similarity=0.392 Sum_probs=172.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 45999999999999999999999999999999999999887 9999999998765433 3579999999989999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.|+....+...+. + ..+....++.+++.+||.+..++.++ .
T Consensus 92 ~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERP-------------------P-----------EAEIRAKVHELLKLVQLDWLADRYPA-----Q 136 (239)
T ss_pred HHHHhhhhhhccccccC-------------------C-----------HHHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 99999865432110000 0 00111235678899999877665554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|++++...+ .+|+.++|...++..++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELH-VTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 999999999999999999999999999999999999999999998865334 4555577777888999999999999999
Q ss_pred EEecChHHH
Q 000971 404 VYQGPRELV 412 (1206)
Q Consensus 404 v~~G~~~~~ 412 (1206)
++.|+++++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999998865
No 233
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-35 Score=338.65 Aligned_cols=224 Identities=20% Similarity=0.288 Sum_probs=182.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1206)
.+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 48899999877532 12356999999999999999999999999999999999976542 237999999987
Q ss_pred CCcc---c---cc-ceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCC
Q 000971 907 KKQE---T---FA-RISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1206)
Q Consensus 907 ~~~~---~---~~-~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 977 (1206)
+... . ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 6431 1 12 4699999998 57889999999876544332 234555567789999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||||||||++||+||+.+|+|||+||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999765 999999999986 46678999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 234
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=332.05 Aligned_cols=219 Identities=26% Similarity=0.360 Sum_probs=178.8
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC------eeEEEEEE
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------YITGNITI 902 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~------~~~G~i~i 902 (1206)
++++|+++++. ++.+|+||||+|++|+++||+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 57888887763 246999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcC-CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 903 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 903 ~g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
+|.+... ..+++.++|++|++..++.+||+||+.+...... ......++.++.++++++.++|.+..++. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987532 2345568999999876667999999987532111 00111123445688999999998877665 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhc
Q 000971 979 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAF 1048 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~---------~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~ 1048 (1206)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++ ++...+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998776 899999999987 577889
Q ss_pred CeEEEEecCcEEEEEcCCC
Q 000971 1049 DELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1049 d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7899998853
No 235
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=332.05 Aligned_cols=216 Identities=23% Similarity=0.286 Sum_probs=181.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4889999988741 113589999999999999999999999999999999998763 479999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.++|++|++. +++..|+.+|+.|..... ....++..+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677789999998864322 223444456788999999998877766 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999987 4554 999999985 79999
Q ss_pred EcCCC
Q 000971 1063 VGPLG 1067 (1206)
Q Consensus 1063 ~g~~~ 1067 (1206)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98853
No 236
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=334.31 Aligned_cols=219 Identities=20% Similarity=0.274 Sum_probs=180.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-+.++|+++.++... ....+.+|+||||+|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 378999999875210 00124699999999999999999999999999999999998763 479999999876
Q ss_pred Cc----ccccceEEEeecCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 908 KQ----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 908 ~~----~~~~~~~gyv~q~~~~-~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. ...++.+||++|++.. +...||.|++.|..... .....+.++.++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2245679999999742 33468999998875432 2334555667899999999998888774 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 454 4999999986 7899
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99875
No 237
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=334.69 Aligned_cols=217 Identities=24% Similarity=0.304 Sum_probs=181.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCe-eEEEEEEcCcc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY-ITGNITISGYP 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 906 (1206)
.++++|+++.++. ..+.+|++||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4789999988741 12359999999999999999999999999999999999765321 13899999987
Q ss_pred CCc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 907 KKQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
... ...++.+||++|++. .++..||+||+.|....+ ..+.++.++.++++++.++|.+..++.+ ..||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 643 223567999999974 566789999998764322 2344555667899999999998877763 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ .+ ..+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999987 34 57999999985 7999
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99875
No 238
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.9e-35 Score=338.00 Aligned_cols=206 Identities=27% Similarity=0.385 Sum_probs=174.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
.++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999987 999999999875322 2357999999998999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+.....+... .+....++.+++.+||.+..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543321100 0011234567899999988877665
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|..+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4556668888889999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
+++.|+++++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 239
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2e-35 Score=326.57 Aligned_cols=214 Identities=25% Similarity=0.378 Sum_probs=173.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999887 9999999998865442 2459999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.+......... .... ....+ ..+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~------~~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA------RARRE-----------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc------ccccc-----------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999998754321100 0000 00000 0011234677899999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|++++. .+ .+|+.++|+.+++.++||+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeC
Confidence 47999999999999999999999999999999999999999999998765 44 4556678888899999999999999
Q ss_pred CeEEEecChHHH
Q 000971 401 GQIVYQGPRELV 412 (1206)
Q Consensus 401 G~iv~~G~~~~~ 412 (1206)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999998875
No 240
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-35 Score=320.87 Aligned_cols=200 Identities=31% Similarity=0.418 Sum_probs=168.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35999999999999999999999999999999999999887 9999999998764432 3579999999988999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.+..+..+... .+....++.+++.+||++..+..++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03301 90 YDNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKPK-----Q 130 (213)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCChh-----h
Confidence 999988654321100 0112235678899999887776554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++...+ .+|+.++|..+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865334 4555577888889999999999999999
Q ss_pred EEec
Q 000971 404 VYQG 407 (1206)
Q Consensus 404 v~~G 407 (1206)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 241
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=327.42 Aligned_cols=219 Identities=21% Similarity=0.269 Sum_probs=176.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC-CeeEEEEEEcCccC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-GYITGNITISGYPK 907 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 907 (1206)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788888774 24699999999999999999999999999999999997532 24579999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
.. ..+++.++|++|++.+++ .|++||+.+....+... ...+..+++++++++.++|.+........ ....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988887 69999998865433110 11233445688999999995432111111 14579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999987 57788999999985 7999988
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 74
No 242
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.7e-35 Score=333.45 Aligned_cols=205 Identities=21% Similarity=0.248 Sum_probs=153.5
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcC
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 904 (1206)
.|..+.+.+|++.++ |. .-+++.+++..+..-+..+++|+||+||||+++++.|..++ ..|-+-+.+
T Consensus 359 ~~p~l~i~~V~f~y~-p~----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYT-PS----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCC-Cc----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc
Confidence 445688999988775 11 11689999999999999999999999999999999986552 356665554
Q ss_pred ccCCcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCH
Q 000971 905 YPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLST 983 (1206)
Q Consensus 905 ~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSg 983 (1206)
+..++|-.|...-+-.+.|.+- .+-...+ |. .. ++.+++-+..+||..- +... +.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~-pG-~~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF-PG-KT----EEEIRRHLGSFGLSGELALQS-----IASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC-CC-CC----HHHHHHHHHhcCCCchhhhcc-----ccccCC
Confidence 4568998887554433444332 2222222 21 12 2346778999999752 3222 467999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..|||++|+-+. +-..|+.+.+..+|.-.-..
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999888875 4589999999763 66789999999875444455
Q ss_pred cCC
Q 000971 1064 GPL 1066 (1206)
Q Consensus 1064 g~~ 1066 (1206)
|..
T Consensus 562 g~~ 564 (582)
T KOG0062|consen 562 GGI 564 (582)
T ss_pred ccH
Confidence 553
No 243
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=338.99 Aligned_cols=223 Identities=17% Similarity=0.203 Sum_probs=179.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--CeeEEEEEEcCc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--GYITGNITISGY 905 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~ 905 (1206)
-+.++||++.+..+ .+...+|+||||+|++||++||+|+||||||||+++|+|...+ .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37889999887532 1235799999999999999999999999999999999997642 235799999998
Q ss_pred cCCcc---c----ccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCC---CCHHHHHHHHHHHHHHcCCccc---cc
Q 000971 906 PKKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPE---VDSETRKMFIEEVMELVELKPL---IQ 970 (1206)
Q Consensus 906 ~~~~~---~----~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~ 970 (1206)
++... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++|+.++|.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 75321 1 1246999999975 5788999999976422110000 1123345678999999999753 34
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcC
Q 000971 971 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFD 1049 (1206)
Q Consensus 971 ~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d 1049 (1206)
+. +..|||||||||+||+||+.+|+||||||||+|||+.++..|++.|+++.++ |.|||++||+++ .+.+.+|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 44 4579999999999999999999999999999999999999999999999875 999999999986 5778899
Q ss_pred eEEEEecCcEEEEEcCC
Q 000971 1050 ELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1050 ~v~ll~~gg~~~~~g~~ 1066 (1206)
++++|.+ |++++.|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999985 799999985
No 244
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.9e-35 Score=325.16 Aligned_cols=212 Identities=25% Similarity=0.375 Sum_probs=180.6
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|...+ ..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5788887764 23699999999999999999999999999999999998663 47999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234579999999988889999999987654331 223344566889999999988777764 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998775 899999999986 57888999999985 789998885
No 245
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=335.72 Aligned_cols=219 Identities=20% Similarity=0.310 Sum_probs=178.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|++++++... .....+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 588999998874210 0013599999999999999999999999999999999998763 479999999765
Q ss_pred C--------cccccceEEEeecCCCC-CCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCC
Q 000971 908 K--------QETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPG 977 (1206)
Q Consensus 908 ~--------~~~~~~~~gyv~q~~~~-~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~ 977 (1206)
. ...+++.++|++|++.. ....|++||+.|..... ....++..+.++++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22369999998864322 123344456688999999994 566665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 57889999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 789888874
No 246
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-35 Score=325.27 Aligned_cols=205 Identities=28% Similarity=0.377 Sum_probs=172.5
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHIG 239 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1206)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 9999999998765421 357999999999999
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+||+||+.+.....+... .+....++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988654321100 001123567889999987776554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|..+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4799999999999999999999999999999999999999999999876533 4555667777888899999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987653
No 247
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=330.80 Aligned_cols=215 Identities=21% Similarity=0.258 Sum_probs=176.4
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 903 (1206)
..+.++||++.++ .+.+|+|+||+|++||++||+||||||||||+++|+|...+ .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3589999998874 24699999999999999999999999999999999997542 1357999999
Q ss_pred CccCC-----cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccC
Q 000971 904 GYPKK-----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVG 974 (1206)
Q Consensus 904 g~~~~-----~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 974 (1206)
|.++. ...+++.++|++|++.+++ .||+||+.+.+..+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98653 1234567999999998887 499999988754331 11 223455778899888743 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 975 ~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++...||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999987 688899999999
Q ss_pred ec----------CcEEEEEcCC
Q 000971 1055 KR----------GGQEIYVGPL 1066 (1206)
Q Consensus 1055 ~~----------gg~~~~~g~~ 1066 (1206)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678998875
No 248
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-35 Score=326.58 Aligned_cols=220 Identities=20% Similarity=0.283 Sum_probs=178.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478999998874 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ..+++.++|++|+..+++.+|++||+.+...... .....+.++.++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2346679999999998999999999987543221 122333445688999999986422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.||++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999987 57789999999985 79
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 249
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=324.98 Aligned_cols=211 Identities=21% Similarity=0.295 Sum_probs=177.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++||++.++. + ..||||++++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecC
Confidence 578899988741 1 2389999999999999999999999999999998663 4799999998754
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.++|.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12456899999999999999999998753211 111 2234566899999999998888774 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999987 57788999999985 789998875
No 250
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=326.36 Aligned_cols=209 Identities=26% Similarity=0.346 Sum_probs=175.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 478899998763 23599999999999999999999999999999999997653 479999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.++|++|++.+++ .||+||+.+....+ . .....+.++++.++|. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999998753322 1 1124578899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999987 57788999999985 78888
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 251
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-36 Score=346.92 Aligned_cols=213 Identities=26% Similarity=0.432 Sum_probs=181.5
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcC
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 904 (1206)
.+..+..+|++|.++. ++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 3456777799998852 23799999999999999999999999999999999998874 489999999
Q ss_pred ccCC---cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccccc------ccCC
Q 000971 905 YPKK---QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQS------LVGL 975 (1206)
Q Consensus 905 ~~~~---~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~------~~g~ 975 (1206)
.+.. ...+++.++||+|++.+++ -|++||+.++. + +.+ ++.+.++++..+|.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 4568899999999998876 69999998752 1 122 3458899999999877665 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 599999999975 467789999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799999875
No 252
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-35 Score=324.10 Aligned_cols=204 Identities=23% Similarity=0.379 Sum_probs=171.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 99999998864322110 0 011223567889999987776655
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|..+++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998764 3 44566677888899999999999999
Q ss_pred CeEEEecChHHH
Q 000971 401 GQIVYQGPRELV 412 (1206)
Q Consensus 401 G~iv~~G~~~~~ 412 (1206)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999998765
No 253
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-35 Score=338.42 Aligned_cols=229 Identities=24% Similarity=0.372 Sum_probs=186.4
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEcCCCC
Q 000971 110 VGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPAS 189 (1206)
Q Consensus 110 ~~~~~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~Gs 189 (1206)
..+..|.=.++|+|++.+-. ++++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 35556666799999887731 224599999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHH
Q 000971 190 GKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTEL 266 (1206)
Q Consensus 190 GKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~ 266 (1206)
||||+|++|.+.++ . +|+|.+||+++.+... |+.+|||||+..+| +-||.+||.++..- .-++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 4 9999999999987765 47899999976555 45999999997431 223444445
Q ss_pred HHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCCccce
Q 000971 267 ARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALF 346 (1206)
Q Consensus 267 ~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vll 346 (1206)
|++.. ..|. +..|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~--------------------------~hd~---i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAG--------------------------LHDV---ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcC--------------------------cHHH---HHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 54321 1111 34588899999999876 599999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHH
Q 000971 347 MDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1206)
Q Consensus 347 lDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~ 414 (1206)
+|||||.||+.|..++++.+... ..++|+|+. .|.. .+...||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~I-vH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMI-VHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEE-Eecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 345666664 4543 4677899999999999999999999875
No 254
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-35 Score=323.59 Aligned_cols=211 Identities=26% Similarity=0.380 Sum_probs=178.7
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.+. . ++|+|+|++|+|||++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~ 65 (235)
T cd03299 2 KVENLSKDWK-------------E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITN 65 (235)
T ss_pred eeEeEEEEeC-------------C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCc
Confidence 5677777653 1 279999999999999999999999999999999998663 47999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
. ..++.++|++|++.+++.+|+.||+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||
T Consensus 66 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 137 (235)
T cd03299 66 LPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQR 137 (235)
T ss_pred CChhHcCEEEEeecCccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHH
Confidence 1 12457999999999998999999998764332 1233444556789999999988877764 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
++||+||+.+|++|+|||||+|||+.++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 138 l~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 138 VAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 999999999986 57788999999985 789988874
No 255
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3e-35 Score=324.73 Aligned_cols=201 Identities=29% Similarity=0.416 Sum_probs=169.5
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEee-cCCCCCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPF 928 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-q~~~~~~~ 928 (1206)
+.+.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++ |.+.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 346799999999999999999999999999999999998663 47999999976432 23456789997 55667788
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPT 1008 (1206)
+|++|++.+...++ ....++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765443 1233444556888999999988877764 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 1009 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998765 899999999987 57788999999985 6887654
No 256
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=305.12 Aligned_cols=210 Identities=23% Similarity=0.373 Sum_probs=181.9
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1206)
++++++++||+.+++||+++++|||||||||.+.++.|+..|+ +|+|.++|.+++.++.. .-++|+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4578999999999999999999999999999999999999998 99999999999987764 3589999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
-.|||+|||.-..+.+.... ...+.+...+.+|+.|.|.|+++..-.
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a~- 138 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKAY- 138 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCccc-
Confidence 99999999987665432100 001223457889999999999986543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.. .+.-|+..-|.-.|+.+.||+.+++
T Consensus 139 ----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 139 ----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 6999999999999999999999999999999999999999999998864 3555665778888999999999999
Q ss_pred cCCeEEEecChHHHHH
Q 000971 399 SDGQIVYQGPRELVLE 414 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1206)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998863
No 257
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-35 Score=320.92 Aligned_cols=200 Identities=29% Similarity=0.379 Sum_probs=168.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999998763 245799999999889999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998654322100 001123567889999987766655 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1206)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++....+ ++|+.++|..+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999998754334 455557777888899999999999 799
Q ss_pred EEEecCh
Q 000971 403 IVYQGPR 409 (1206)
Q Consensus 403 iv~~G~~ 409 (1206)
+++.++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988765
No 258
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=343.09 Aligned_cols=207 Identities=24% Similarity=0.324 Sum_probs=176.0
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~ 236 (1206)
...+|+|+|+.|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+..
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999987 9999999999875432 246999999999
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
+++.+||+||+.|+....+... .+....++++++.+||++..+..+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999999765432110 011123567899999987776554
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|..+++.+++|+|+
T Consensus 163 -----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 -----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEE
Confidence 4799999999999999999999999999999999999999999999876533 4556667888899999999999
Q ss_pred EEcCCeEEEecChHHHH
Q 000971 397 LLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1206)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988764
No 259
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.5e-36 Score=340.55 Aligned_cols=211 Identities=27% Similarity=0.435 Sum_probs=179.4
Q ss_pred CcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCc
Q 000971 826 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY 905 (1206)
Q Consensus 826 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 905 (1206)
+..+.|+||+++|. +++++|+||||+|++||.+||+|+|||||||++++|.+... .+|+|+|||+
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 45699999999985 23459999999999999999999999999999999998765 3799999999
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------cCC
Q 000971 906 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-------VGL 975 (1206)
Q Consensus 906 ~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------~g~ 975 (1206)
+++. ..+|+.+|||||+..++. -||.+|+.|+. .+.+. ++|-++.+..++.+...++ +|+
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASD----EEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCH----HHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8654 567889999999988775 69999999873 23333 3477788888887654444 666
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
.| ..|||||||||+||||++.+|+|+++|||||.||..+.+.+++.+++. ..|+|+|++.|+. ++...||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 54 469999999999999999999999999999999999999999999984 4589999999996 4788999999999
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++...|+.
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 6 688888885
No 260
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.5e-35 Score=335.31 Aligned_cols=205 Identities=27% Similarity=0.385 Sum_probs=176.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 9999999998764322 357999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|.||+.|.+++.+... .+....++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765432110 0112235678999999988877654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+++|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999874 24 566668888899999999999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 261
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=325.74 Aligned_cols=215 Identities=21% Similarity=0.246 Sum_probs=177.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
-+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 478899988763 246999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ...++.+||++|++.+++ .|++||+.|...... ....++..++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999998887 899999988654321 1123344556888999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 699999999986 5788899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 789999885
No 262
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=335.28 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=180.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 903 (1206)
..+.|+|+++.+.. +.+.+|+||||+|++||++||+|||||||||||++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36899999988841 124599999999999999999999999999999999997532 2347999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
|.++.. ...++.++||+|++.+++ .|++||+.|..... ...+.+..++.++++++.++|.+..+..++.. +
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998642 234667999999998775 79999999864321 11112223445788899999865433344433 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999986 46778999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 263
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.7e-35 Score=321.92 Aligned_cols=203 Identities=29% Similarity=0.411 Sum_probs=171.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999987 999999999875422 2356999999998898999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+..+..+... .+....++.+++.+||.+..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999998654332100 0011235678889999887776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++. + .+|+.++|..+++.+++|+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 556667788888889999999999999
Q ss_pred EEEecChHHH
Q 000971 403 IVYQGPRELV 412 (1206)
Q Consensus 403 iv~~G~~~~~ 412 (1206)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988754
No 264
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.7e-35 Score=318.62 Aligned_cols=189 Identities=23% Similarity=0.354 Sum_probs=162.3
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC---c----ccccceEEEeecCCCCC
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 926 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~q~~~~~ 926 (1206)
+.+|+||||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4699999999999999999999999999999999998763 4799999998742 1 12356799999999988
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000971 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1006 (1206)
Q Consensus 927 ~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDE 1006 (1206)
+.+|++||+.+....+ .....+..+.++++++.++|.+..++.+ ..||+|||||++||+||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8999999998865432 2233445567899999999988777764 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 1007 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 1007 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
||+|||+.+...+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999986 34689999875
No 265
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=326.12 Aligned_cols=215 Identities=26% Similarity=0.312 Sum_probs=175.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1206)
.+.++|+++.+. .+.+|+|+||+|++||++||+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999998874 2369999999999999999999999999999999999632 21 2379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 124567999999988877 899999987643321 1122334556788999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++||+||+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5788899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 266
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.4e-35 Score=323.94 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=168.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCC-----CCCCCceeEEEECCeeCCCCC-----ccceEEEecCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL-----DSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQH 234 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l-----~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~ 234 (1206)
+++|+|+|++|++|++++|+|||||||||||++|+|.+ ++. +|+|.++|.++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999999 776 999999999876433 13579999999
Q ss_pred CCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 235 d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
+.++ .+||+||+.++....+.... .+....++.+++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8777 89999999986543211000 0011235678899999876665
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ . ++|+.++|..+++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 431 357999999999999999999999999999999999999999999998764 2 5566678888889999999
Q ss_pred EEEEcCCeEEEecChHH
Q 000971 395 IILLSDGQIVYQGPREL 411 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~ 411 (1206)
|++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 267
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=333.66 Aligned_cols=218 Identities=22% Similarity=0.338 Sum_probs=175.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC-------CccceEEEecCCCC-
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHDN- 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~-------~~~~~~~yv~Q~d~- 236 (1206)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 99999999987532 11357999999852
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1206)
.+...||+||+.|+....+... .+....++.+++.+||. +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998754322100 01122467789999996 455654
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
+ +.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++.. .+++|+.++|..+++..+||+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4 479999999999999999999999999999999999999999999988653 3456666888889999999999
Q ss_pred EEEcCCeEEEecChHHHHH---HHHhcCCCCCC
Q 000971 396 ILLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1206)
++|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999887642 23344554443
No 268
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-35 Score=318.51 Aligned_cols=191 Identities=23% Similarity=0.381 Sum_probs=163.5
Q ss_pred cceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 000971 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 859 ~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
|||++|++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998663 47999999986531 1235579999999988889999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
.||+.+..... .....++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233455688999999998777765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999775 899999999986 57788999999985 6887665
No 269
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=325.78 Aligned_cols=219 Identities=19% Similarity=0.256 Sum_probs=175.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcCc
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISGY 905 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~ 905 (1206)
-+++|+++.++ .+.+|+|+||+|++|++++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35788887763 2469999999999999999999999999999999999754 11 24799999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 906 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 906 ~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
++.. ..+++.++|++|++.+++. |+.||+.+....+. .....+..++.++++++.++|.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999888775 99999987643321 1112233455688999999997532111111 1357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999987 57788999999986 789
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 988874
No 270
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=324.73 Aligned_cols=215 Identities=21% Similarity=0.307 Sum_probs=176.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--C-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 904 (1206)
.+.++||++.++ .+.+|+|+||+|++||++||+||||||||||+++|+|...+ . +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478999998874 13599999999999999999999999999999999996432 1 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ....++.++.++++++.+++.+ ..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 124567899999988877 899999988654321 1123344567888999998753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. .+.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999985 4899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 271
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.5e-35 Score=329.21 Aligned_cols=223 Identities=20% Similarity=0.267 Sum_probs=180.0
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++++..+.. +...+.+.+|+|||++|++|+++||+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 789999988852110 0000124699999999999999999999999999999999998764 4799999998764
Q ss_pred cc---cccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCC
Q 000971 909 QE---TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~---~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LS 982 (1206)
.. ..++.++|++|++. +++.+|+.+++.++..... ........+.++++++.++|. ...+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 21 22346899999875 5678899999987654332 223344456789999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~ 1061 (1206)
||||||++||++|+.+|+||||||||+|||+.+...+.+.|+++.++ |.|||+++|+++ ++...||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999987 57778999999985 7888
Q ss_pred EEcCC
Q 000971 1062 YVGPL 1066 (1206)
Q Consensus 1062 ~~g~~ 1066 (1206)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88874
No 272
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=326.73 Aligned_cols=219 Identities=20% Similarity=0.260 Sum_probs=176.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|+||+|++||++||+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999998774 2369999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ...++.+||++|++.+++. ||+||+.|....+. ....++..+.++++++.+++.+........ ...
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87632 2345679999999888875 99999987643321 112334455688899999986421111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57889999999985 79
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9998874
No 273
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-35 Score=331.75 Aligned_cols=224 Identities=26% Similarity=0.374 Sum_probs=180.2
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCC-CC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHD-NH 237 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d-~~ 237 (1206)
.+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 999999999875311 135799999985 24
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1206)
+...||.||+.|+....+... .+....+..+++.+||. ...+..
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccCC-
Confidence 445799999999764332100 01122456788999996 344543
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999998754 3 4556668888889999999999
Q ss_pred EEcCCeEEEecChHHHH---HHHHhcCCCCCCCCChhHHH
Q 000971 397 LLSDGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~f~~~G~~cp~~~~~adfl 433 (1206)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556777777654444433
No 274
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.3e-35 Score=321.49 Aligned_cols=195 Identities=26% Similarity=0.380 Sum_probs=164.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 9999999998754321 35799999999899
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.++.+..+... .+....++.+++.+||++..+..++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 137 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALPM- 137 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 99999999998754322100 0011235678899999877766554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++..+||+|++|
T Consensus 138 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 138 ----QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999998754 3 455666888888899999999999
Q ss_pred cCCeE
Q 000971 399 SDGQI 403 (1206)
Q Consensus 399 ~~G~i 403 (1206)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 275
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.4e-35 Score=320.81 Aligned_cols=203 Identities=24% Similarity=0.395 Sum_probs=168.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765432 3469999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccCc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1206)
+||+||+.+...... .. +....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~~----------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--RA----------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--ch----------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999998653221 00 0011234456666 4665555544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999998764 3 4556667788888999999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987653
No 276
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4.4e-35 Score=341.28 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=169.2
Q ss_pred cceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 000971 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 859 ~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
|+||++++|++++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 89999999999999999999999999999998763 47999999987532 1235679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
+||+.|+.... ...+.++.++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334556899999999998888764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999775 899999999987 67888999999985 789999875
No 277
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=340.48 Aligned_cols=190 Identities=24% Similarity=0.390 Sum_probs=167.3
Q ss_pred cceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 000971 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 859 ~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
||||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998764 47999999976532 1235679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
+||+.|... ....+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112346889999999998888764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999986 68889999999985 799999985
No 278
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=326.15 Aligned_cols=216 Identities=22% Similarity=0.296 Sum_probs=178.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC-e--eEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-Y--ITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478999998874 235999999999999999999999999999999999975532 1 479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ..+..+.++.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 86532 223557999999998887 899999987654331 1223344556888999999853 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999997 6888999999998
Q ss_pred c----CcEEEEEcCC
Q 000971 1056 R----GGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~----gg~~~~~g~~ 1066 (1206)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 4 4899999985
No 279
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-35 Score=324.31 Aligned_cols=218 Identities=23% Similarity=0.332 Sum_probs=176.4
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 905 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 905 (1206)
++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 78899988773 235999999999999999999999999999999999975421 25799999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 906 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 906 ~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+.... ..+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7532 123567999999988887 899999987653321 11223345567889999998643211111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||||++||+||+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999987 57788999999986 688
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888874
No 280
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-35 Score=324.28 Aligned_cols=214 Identities=29% Similarity=0.410 Sum_probs=172.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 9999999998765431 35699999999899
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.++..... .... .+. +..+ ......++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---~~~------~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---SLF------GLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---hhc------ccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987542110 0000 000 0000 001223567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++...+ .+|+.++|+.+++.+++|+|++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998765334 45666788888899999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988753
No 281
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-35 Score=318.78 Aligned_cols=224 Identities=22% Similarity=0.310 Sum_probs=181.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC-C-C-eeEEEEEEcCc
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT-G-G-YITGNITISGY 905 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~-~-~-~~~G~i~i~g~ 905 (1206)
++.+|++-++.... +...+++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 56788876665331 24679999999999999999999999999999999999765 2 2 45689999998
Q ss_pred cCCc---cc----ccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 000971 906 PKKQ---ET----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLP 976 (1206)
Q Consensus 906 ~~~~---~~----~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 976 (1206)
++-. .. +-+.+++++|++. +.|.+||.+.+.=......... .+++..+++.++|+.++|.+-...+- .
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~--~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLK--S 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHh--h
Confidence 6422 11 2347999999975 6788999887754433322111 35566778999999999987432221 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
.+..|||||||||.||.||+.+|+|||.||||++||...++.|+++|+++.+ .|.|+|++|||.. -+.+.+|||+||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 2468999999999999999999999999999999999999999999999986 5999999999997 4889999999999
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
. |++|..|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 282
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=5.8e-35 Score=339.14 Aligned_cols=208 Identities=25% Similarity=0.307 Sum_probs=176.0
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCe----eCCCCCc-------cceEEEe
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH----DMGEFVP-------ERTAAYI 231 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~----~~~~~~~-------~~~~~yv 231 (1206)
....+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4577999999999999999999999999999999999999987 999999996 3333221 1469999
Q ss_pred cCCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000971 232 SQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVC 311 (1206)
Q Consensus 232 ~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1206)
+|+..++|.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865432110 0112345778999999887
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000971 312 ADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL 391 (1206)
Q Consensus 312 ~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1206)
.|..++ .|||||||||.|||+|+.+|+||+|||||+|||+.++.++.+.|+++.... +.+|+.++|+..++.++
T Consensus 158 ~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 776554 699999999999999999999999999999999999999999999886533 45566688889999999
Q ss_pred cCeEEEEcCCeEEEecChHHHH
Q 000971 392 FDDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 392 fD~vilL~~G~iv~~G~~~~~~ 413 (1206)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998874
No 283
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=329.41 Aligned_cols=216 Identities=23% Similarity=0.300 Sum_probs=180.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++.. ....+|+|||+++++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 47899999887410 123599999999999999999999999999999999998763 479999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998764322 123444456789999999998877775 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++|||+|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999987 34 46999999996 68888
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 284
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-35 Score=323.67 Aligned_cols=206 Identities=26% Similarity=0.397 Sum_probs=171.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999987 9999999998765432 35789999999999999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--cccccccCc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV--CADTMVGDE 319 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1206)
||+||+.+..+..+... .+....+..+++.+||.+ ..++.
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~---- 132 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRY---- 132 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcC----
Confidence 99999998654321100 001123567889999985 44443
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
++.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|...++.+++|+|++|+
T Consensus 133 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 133 -PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999886533 4556667777788899999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+++++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987653
No 285
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.7e-35 Score=317.93 Aligned_cols=198 Identities=31% Similarity=0.455 Sum_probs=166.6
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCCH
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1206)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 999999999876421 13579999999989999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.+.....+... .+....++.+++.+||++..+..++ .
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRVG-----G 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhhh-----h
Confidence 999987543321100 0112345678999999877776554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|...++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 44566677888889999999999999999
Q ss_pred EEec
Q 000971 404 VYQG 407 (1206)
Q Consensus 404 v~~G 407 (1206)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8765
No 286
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=7.3e-35 Score=311.71 Aligned_cols=190 Identities=47% Similarity=0.837 Sum_probs=162.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCC--CCCeeEEEEEEcCc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK--TGGYITGNITISGY 905 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 905 (1206)
.+.++||++.++.... ...+.+|+|+|+++++|++++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4789999988852100 01246999999999999999999999999999999999986 5 35899999998
Q ss_pred cCCcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 906 PKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 906 ~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
+......++.++|++|++.+++.+|++||+.+...+. .||+||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 7654445677999999998888999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998877999999999986557788999999985 6887754
No 287
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-35 Score=323.88 Aligned_cols=219 Identities=23% Similarity=0.256 Sum_probs=176.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467889988763 246999999999999999999999999999999999975531 3479999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 905 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 905 ~~~~~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
.++.. ...++.++|++|++.+++ .||.||+.+...... ....+...+.+.++++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 86531 234567999999998887 899999987643221 112233445678889999885422111111 1357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 699999999987 57888999999985 789
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 998874
No 288
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.1e-35 Score=357.06 Aligned_cols=218 Identities=25% Similarity=0.321 Sum_probs=184.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|++++++ ++.+|+||||+|.+|+++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 78899998874 24699999999999999999999999999999999998764 4799999998753
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..++.+||++|++.+++.+||+|++.|....+.. ...+.++.++.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245689999999889999999999886432211 11223344566899999999998877764 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||+||+.+|++|||||||+|||+.++..+++.|+++++.|.|||+++|++. ++...||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57789999999985 789999
Q ss_pred cCCCc
Q 000971 1064 GPLGR 1068 (1206)
Q Consensus 1064 g~~~~ 1068 (1206)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88753
No 289
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.93 Aligned_cols=221 Identities=22% Similarity=0.271 Sum_probs=179.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.++++|+++.+. ...+|+||||++++|+++||+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 488999998874 135999999999999999999999999999999999976532 1369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ...++.++|++|+..+++ .|+.||+.+...... ..+..+..+.+.++++.+++.+..+..... .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87521 234567999999988887 899999987643321 112233345688999999986532222221 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecC-
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG- 1057 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~g- 1057 (1206)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999987 688899999999863
Q ss_pred ---cEEEEEcCC
Q 000971 1058 ---GQEIYVGPL 1066 (1206)
Q Consensus 1058 ---g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999885
No 290
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=327.77 Aligned_cols=203 Identities=25% Similarity=0.328 Sum_probs=170.4
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1206)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5899999999999999999999999999999999999987 9999999998865432 356999999863 45678
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.|+....+... .+....++.+++.+||.+..+..+.
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~---- 137 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPPY---- 137 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCChh----
Confidence 99999998643221100 0112245678999999877776554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++. . +.+|+.++|..+++.++||+|++|++|
T Consensus 138 -~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 138 -HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999998864 3 455666888888899999999999999
Q ss_pred eEEEecChHHH
Q 000971 402 QIVYQGPRELV 412 (1206)
Q Consensus 402 ~iv~~G~~~~~ 412 (1206)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 291
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-35 Score=318.03 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=167.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999887 9999999987754 2346799999999889999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.+.....+... .+....++.+++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988654322100 001223567889999987777654 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv 404 (1206)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ . +.+|+.++|...++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998764 3 455666888888899999999999999998
Q ss_pred Eec
Q 000971 405 YQG 407 (1206)
Q Consensus 405 ~~G 407 (1206)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 292
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=326.13 Aligned_cols=220 Identities=22% Similarity=0.258 Sum_probs=178.0
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 903 (1206)
..++++|+++.+. ++.+|+|+||.|++||+++|+||||||||||+++|+|...+ .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3589999998874 23699999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+........ .+
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cc
Confidence 987542 1345679999999888875 99999987643321 112233345688899999986421111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999975 799999999987 57788999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 89998874
No 293
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-34 Score=333.08 Aligned_cols=213 Identities=22% Similarity=0.251 Sum_probs=176.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc-------ceEEEecCCC--
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-------RTAAYISQHD-- 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q~d-- 235 (1206)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.|+|.++.....+ +.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 5699999999999999999999999999999999999987422489999999998765421 3699999997
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000971 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1206)
.++|.+||.+++.+......... ..+....+..+|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 68899999999987543321000 00112345677899999754332
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
. +..+..|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3566789999999999999999999999999999999999999999999998653 3566777899999999999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 294
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-34 Score=324.03 Aligned_cols=214 Identities=21% Similarity=0.296 Sum_probs=175.6
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC--eeEEEEEEcC
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISG 904 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g 904 (1206)
..+.++|+++.++ +.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 4688999998762 24899999999999999999999999999999999986541 1579999999
Q ss_pred ccCCcccc-cceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc---ccccccCCCCC
Q 000971 905 YPKKQETF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP---LIQSLVGLPGV 978 (1206)
Q Consensus 905 ~~~~~~~~-~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~~g~~~~ 978 (1206)
.++..... ++.++||+|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..++. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643222 356999999974 4566899999876433221 111 2356889999999976 34444 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
..||||||||++|||||+.+|+||||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 789988874
No 295
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.1e-35 Score=320.09 Aligned_cols=195 Identities=27% Similarity=0.383 Sum_probs=162.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 9999999998865431 3569999999999
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||+||+.++....+... .+....++.+++.+||++..+..+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754322100 001123567889999987766554
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++..+ ++|+.++|..+++. .||+|++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEE
Confidence 46999999999999999999999999999999999999999999999865334 45555677777775 9999999
Q ss_pred EcCCeE
Q 000971 398 LSDGQI 403 (1206)
Q Consensus 398 L~~G~i 403 (1206)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 296
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.9e-35 Score=326.81 Aligned_cols=207 Identities=21% Similarity=0.341 Sum_probs=172.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999887 9999999998764322 34699999999899
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||.||+.+....... . .. .+....+..+++.+||.+..+..++
T Consensus 97 ~~~tv~enl~~~~~~~~~---~------~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---L------PA------------------------PLLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHccC---C------CH------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 999999999885431100 0 00 0011235667899999887776554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.... +++|+.++|..+++.+++|+|++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEE
Confidence 699999999999999999999999999999999999999999999886533 455666788888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 297
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=328.66 Aligned_cols=216 Identities=22% Similarity=0.337 Sum_probs=174.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCC-CCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD-NHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1206)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 9999999999865332 35799999986 36788
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.|+.+..+... .+....++.+++.+||++..+..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999998654322100 011234577899999987776655
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|+++++..+ ++|+.++|..+++ ..||+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999865334 4555566777777 58999999999
Q ss_pred CeEEEecChHHHHH---HHHhcCCCCC
Q 000971 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1206)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~cp 424 (1206)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999987653 2334455433
No 298
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-35 Score=312.98 Aligned_cols=183 Identities=45% Similarity=0.783 Sum_probs=156.4
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGE 240 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~ 240 (1206)
..+.+|+|+|+.|++|++++|+|||||||||||++|+|.+++....+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 3457999999999999999999999999999999999999821113999999999876542 24579999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++.+.. .+..
T Consensus 98 ~tv~~~l~~~~~~~--------------------------------------------------------------~~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK--------------------------------------------------------------GNEF 115 (202)
T ss_pred CcHHHHHhhhhhhc--------------------------------------------------------------cccc
Confidence 99999998753210 1123
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++....+.++|+++||+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34799999999999999999999999999999999999999999999986544567788788888899999999999999
Q ss_pred CeEEEec
Q 000971 401 GQIVYQG 407 (1206)
Q Consensus 401 G~iv~~G 407 (1206)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998865
No 299
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.36 Aligned_cols=215 Identities=25% Similarity=0.265 Sum_probs=176.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc-
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP- 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 906 (1206)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 478999998874 23599999999999999999999999999999999998663 47999999986
Q ss_pred ----CCcc---c----ccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000971 907 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSL 972 (1206)
Q Consensus 907 ----~~~~---~----~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 972 (1206)
+... . .++.+||++|++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999876432111 1122334556889999999974 55554
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeE
Q 000971 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 973 ~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
+..||||||||++|||||+.+|+||||||||+|||+.+...+++.|++++++ |.|||+++|++. .+...+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799999874
No 300
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=322.30 Aligned_cols=216 Identities=24% Similarity=0.283 Sum_probs=176.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCe---eEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY---ITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 477889988773 2469999999999999999999999999999999999764322 379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 1345579999999999999999999987543221 1122334456777788787643 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999987 5777899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 789998875
No 301
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1e-34 Score=317.19 Aligned_cols=211 Identities=23% Similarity=0.342 Sum_probs=176.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+... .+.+.+|+||||++++|+++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSV--QEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEhH
Confidence 6788998876310 1125799999999999999999999999999999999997653 4899999998753
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .+++.++|++|++.+++.+|+.||+.+...... ....++....+.++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999988888999999988654321 1234445567899999999988777763 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
+|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ +.+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4578999999985 553
No 302
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=319.93 Aligned_cols=201 Identities=26% Similarity=0.345 Sum_probs=166.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1206)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998876542 2469999999988
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||+||+.|.....+... .+.+..++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998654221100 011223567889999987766554
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.... +++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999876433 4455557777777665 589999
Q ss_pred EcCCeEEEecCh
Q 000971 398 LSDGQIVYQGPR 409 (1206)
Q Consensus 398 L~~G~iv~~G~~ 409 (1206)
|.+|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998863
No 303
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.58 Aligned_cols=209 Identities=22% Similarity=0.256 Sum_probs=174.8
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD-- 235 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d-- 235 (1206)
...+|+|||+.|++||+++|+|+||||||||+++|+|+++++ +|+|.|+|.++..... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999987 9999999999876532 35799999997
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000971 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1206)
.++|.+||.||+.+..+..... +. ..+....++.+++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~------------------------~~~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LS------------------------RQEVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CC------------------------HHHHHHHHHHHHHHcCCChHHhcC
Confidence 5889999999999865432100 00 001223456789999994 34444
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.+..|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+
T Consensus 158 -----~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 -----YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCE
Confidence 45579999999999999999999999999999999999999999999988653 356677789999999999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998774
No 304
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=317.52 Aligned_cols=202 Identities=25% Similarity=0.306 Sum_probs=183.0
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc------cc-ccceEEEeecCCCCC
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ------ET-FARISGYCEQNDIHS 926 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~-~~~~~gyv~q~~~~~ 926 (1206)
..-++|+|++|+.||++.|||-||||||||+++|.+...+ ..|+|+++|.++.. .. .++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiep--t~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEP--TRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCC--CCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 4579999999999999999999999999999999998774 58999999987532 11 345789999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000971 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1006 (1206)
Q Consensus 927 ~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDE 1006 (1206)
|+.||.||+.|+..++ .++++++++++.++|+.+||.++.++++ ..|||||||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999997776 5678999999999999999999999984 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1007 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1007 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|.|+|||--+..+++-|.++.++ ++|||++|||.+ |.+..-|||.+|+ +|++|..|++.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 99999999999999999988655 899999999997 7889999999998 68999999863
No 305
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=321.65 Aligned_cols=219 Identities=20% Similarity=0.240 Sum_probs=175.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.+. ++.+|+|+|++|.+|+++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 478899998774 235999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ..+++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 86532 1345679999999988875 999999887543311 11223345677888888875422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999987 57788999999985 78
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9998875
No 306
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.1e-35 Score=324.14 Aligned_cols=213 Identities=26% Similarity=0.351 Sum_probs=171.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999887 9999999998765321 35699999999899
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.++..... ..+. .+.. .. ..+....++.+++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~~~------~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SLLG------RF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hhhc------cc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532110 0000 0000 00 0011224567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+.. +++|+.++|..+++.++||+|++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEE
Confidence 4799999999999999999999999999999999999999999999876533 455666778888888999999999
Q ss_pred cCCeEEEecChHHH
Q 000971 399 SDGQIVYQGPRELV 412 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1206)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998764
No 307
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=356.79 Aligned_cols=218 Identities=26% Similarity=0.319 Sum_probs=183.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|++++++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 378999998773 24699999999999999999999999999999999998763 479999999875
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHhhhhc--C-C-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLR--L-P-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr--~-~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
... ..++.+|||+|++.+++.+||+||+.++.... . . ...+.++.++.+.++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346999999998899999999998753211 0 1 01123344567899999999998877764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. .+...+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999986 57788999999985 78
Q ss_pred EEEEcCCC
Q 000971 1060 EIYVGPLG 1067 (1206)
Q Consensus 1060 ~~~~g~~~ 1067 (1206)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999864
No 308
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.6e-35 Score=368.12 Aligned_cols=210 Identities=25% Similarity=0.404 Sum_probs=177.0
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|.+. +++.+|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999987542 1246999999999999999999999999999999999987 4 37999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.++||+|++.++. -|++||+.++. .+.+. +.++++++..++.+.. |+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998886 59999998852 12332 3478888888876543 5566665
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
| .+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ....+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999875 5899999999985 4677999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799998874
No 309
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-35 Score=368.85 Aligned_cols=215 Identities=29% Similarity=0.437 Sum_probs=180.4
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcC
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 904 (1206)
....++|+||+|+|+..+ +..+|+|+|+.|++|+.+||+|||||||||++.+|.+...| .+|+|.|||
T Consensus 347 ~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP--~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDP--TSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCceEEEcC
Confidence 445799999999998653 34699999999999999999999999999999999998774 589999999
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCC-------ccccccccC
Q 000971 905 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVEL-------KPLIQSLVG 974 (1206)
Q Consensus 905 ~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~~g 974 (1206)
.++.. ...+..+|.|.|+|.++. .|++||+.|+. .+.+ ++.++++.+..+. .+-.++.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF~-~tI~eNI~~G~-----~dat----~~~i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLFA-TTIRENIRYGK-----PDAT----REEIEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhhc-ccHHHHHhcCC-----Cccc----HHHHHHHHHHccHHHHHHhhHHhhccccc
Confidence 98654 446778999999997764 79999999862 1222 2335666655554 344567778
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 975 ~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
..|+ .||||||||++|||||+++|+||+||||||+||+.+.+.|+++|++. ..|+|.|+++|+.| .| +.+|++++|
T Consensus 485 e~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~-~~grTTivVaHRLS-tI-rnaD~I~v~ 560 (1228)
T KOG0055|consen 485 ERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKA-SKGRTTIVVAHRLS-TI-RNADKIAVM 560 (1228)
T ss_pred CCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHh-hcCCeEEEEeeehh-hh-hccCEEEEE
Confidence 7665 49999999999999999999999999999999999999999999886 46999999999987 34 559999999
Q ss_pred ecCcEEEEEcCC
Q 000971 1055 KRGGQEIYVGPL 1066 (1206)
Q Consensus 1055 ~~gg~~~~~g~~ 1066 (1206)
++ |+++..|..
T Consensus 561 ~~-G~IvE~G~h 571 (1228)
T KOG0055|consen 561 EE-GKIVEQGTH 571 (1228)
T ss_pred EC-CEEEEecCH
Confidence 96 799999985
No 310
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.3e-33 Score=365.60 Aligned_cols=134 Identities=22% Similarity=0.247 Sum_probs=108.9
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHh---hCCc
Q 000971 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1000 (1206)
Q Consensus 925 ~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqrl~ia~aL~---~~P~ 1000 (1206)
.+...||.|+|.++..-......+.++..+.+ ++|+.+||.+. .++. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45568999999887542211112233444556 58899999876 5665 3579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe-----cCcEEEEEcCC
Q 000971 1001 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1206)
Q Consensus 1001 iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~-----~gg~~~~~g~~ 1066 (1206)
+|+|||||+|||+.+...+++.|++++++|.|||+++|++. .+ ..+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999986 35 8999999996 36899999986
No 311
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=7.5e-35 Score=320.47 Aligned_cols=201 Identities=25% Similarity=0.335 Sum_probs=167.1
Q ss_pred EeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC--eeEEEEEEcCccCCcccc-cceEEEeecCCC--CCCCCC
Q 000971 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 930 (1206)
Q Consensus 856 vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~q~~~--~~~~~T 930 (1206)
+|+|||+++++|++++|+||||||||||+++|+|...+. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999976531 147999999987653322 357899999974 567789
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc---cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000971 931 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK---PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1206)
Q Consensus 931 v~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEP 1007 (1206)
+.|++.+...... ...+..++.++++++.+++. +..+.. +..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233456689999999998 344554 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1008 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999985 789888874
No 312
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=325.61 Aligned_cols=215 Identities=20% Similarity=0.256 Sum_probs=175.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1206)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998874 2369999999999999999999999999999999999632 1 13479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..++.
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 1245679999999888874 99999987643221 1112233456788899998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778999999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 789999874
No 313
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.9e-35 Score=363.77 Aligned_cols=207 Identities=26% Similarity=0.387 Sum_probs=167.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
.++|+|+|++|+||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++.+... ++.++||+|++.+|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 35899999999999999999999999999999999999 76 8999999999988765 468999999987776 5
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++.. +.+.+...+++...+ .+..+ -.|++..||.||+.+.
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQAA 484 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHH--HhcccccccccccCCC
Confidence 99999998631 111111112211110 11222 2466778999998754
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.||||||||++||||++.+|+||+||||||+||+.++..|.+.|+++. .++|+|+..|++ +....||+|++|++|
T Consensus 485 -~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 485 -GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998864 356666655544 456789999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
++++.|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998864
No 314
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.6e-35 Score=339.78 Aligned_cols=206 Identities=29% Similarity=0.438 Sum_probs=165.8
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1206)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||++..+..+ +++++||+|++.+|+ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 9999999999887764 588999999987666 59
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
+||||.++..-. + |+.+.++.. -..+.+.+.-+...||.+|+.+ +
T Consensus 411 ireNi~l~~~~~---s-----------------------~e~i~~al~--------~a~l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARPDA---S-----------------------DEEIIAALD--------QAGLLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCCcC---C-----------------------HHHHHHHHH--------HhcHHHhhcCCCcccchhccCC-C
Confidence 999999964210 0 000000000 0012222222556789999765 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
+|||||+|||++|||++.+++++++||||++||.+|...|.+.|.++++ ++|+++ ++|.. +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999998864 456555 55544 4556689999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999998853
No 315
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-34 Score=318.99 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=169.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999987 9999999998764332 247999999988889999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987643321100 0011235667889999877776554
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++++..+. +|+.++|..+++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGL-SVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCC-EEEEEecChhhHh-hCCEEEEEeCCe
Confidence 69999999999999999999999999999999999999999999988653344 4555677777775 499999999999
Q ss_pred EEEecChHHHH
Q 000971 403 IVYQGPRELVL 413 (1206)
Q Consensus 403 iv~~G~~~~~~ 413 (1206)
+++.|+++++.
T Consensus 210 i~~~~~~~~~~ 220 (236)
T TIGR03864 210 VLADGAAAELR 220 (236)
T ss_pred EEEeCCHHHHH
Confidence 99999988764
No 316
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-34 Score=314.78 Aligned_cols=202 Identities=23% Similarity=0.277 Sum_probs=173.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+++||++++|++++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 588999998763 23599999999999999999999999999999999998764 479999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
.....++.++|++|++.+++.+|+.||+.+...++. . ..++.++++++.++|.+..+..+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543334568999999888888999999987654321 1 12345788999999988777764 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|+++ ++.+.+|+++++..
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999997 68899999999863
No 317
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=321.69 Aligned_cols=219 Identities=18% Similarity=0.231 Sum_probs=178.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--C-eeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 903 (1206)
..+..+++++++. ++.+|+|+||.+++|+++||+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4577788777653 35699999999999999999999999999999999997643 1 247999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 978 (1206)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . .....+.++++++.++|.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987532 23456799999998877 5999999988754332 1 123345688999999986533222221 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe---
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK--- 1055 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~--- 1055 (1206)
..||+|||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5799999999999999999999999999999999999999999999985 4799999999987 5778999999996
Q ss_pred ----cCcEEEEEcCC
Q 000971 1056 ----RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ----~gg~~~~~g~~ 1066 (1206)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999985
No 318
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=327.09 Aligned_cols=215 Identities=20% Similarity=0.277 Sum_probs=175.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1206)
.+.++|+++.++ ...+|+|+||+|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 589999998874 2359999999999999999999999999999999999642 1 02479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 975 (1206)
.++.. ..+++.+||++|++.+++. ||.||+.|....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 86532 1245679999999888874 999999986533211 12233345678889998874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||||+.+|++|||||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 319
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-34 Score=339.53 Aligned_cols=209 Identities=26% Similarity=0.423 Sum_probs=175.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+++|+|+|+.|++||+++|+||||||||||||+|+|.++|. +|+|.++|.++..... ++.++||+|+..+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 9999999998876443 36799999999888999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.++..... .++.. . ..+....++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~--~~~~~---~-------------------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR--SRFDT---W-------------------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc--ccccC---C-------------------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998642110 00000 0 0011234678899999988777655
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
+.|||||||||.||++|+.+|++|+|||||+|||+.+..++.+.|+++++ .+ ++|+.++|..+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999999875 34 45666888999999999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 320
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.6e-35 Score=312.80 Aligned_cols=195 Identities=26% Similarity=0.320 Sum_probs=166.9
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
+++|+++.++ .+.+|+|+|++|++|+++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5678887663 24699999999999999999999999999999999998764 47999999987532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
..+++.++|++|++.+++.+|++||+.+.... . .++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456799999998888899999999875311 0 2345789999999988777663 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
|++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|+|||+++|++. ++...+++++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 677889999877
No 321
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-34 Score=313.23 Aligned_cols=199 Identities=22% Similarity=0.289 Sum_probs=166.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ .+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 56788887763 24699999999999999999999999999999999998664 4799999998753
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ..+++.++|++|++.+++.+|+.||+.+....+. . ..++.++++++.++|.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988899999999988654321 1 1235688999999998777765 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
||++||+||+++|++|+|||||+|||+.+...+++.|++++++|.|||+++|++. .+.+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777999999999986 454544566554
No 322
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=321.28 Aligned_cols=215 Identities=25% Similarity=0.330 Sum_probs=175.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1206)
.+.++|++++++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999998874 2469999999999999999999999999999999999764 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988776 799999987543221 1122333456788999999853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 323
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=330.49 Aligned_cols=213 Identities=21% Similarity=0.244 Sum_probs=173.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC-CceeEEEECCeeCCCCCcc-------ceEEEecCCC-
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVPE-------RTAAYISQHD- 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q~d- 235 (1206)
..+|+|||+.|++||+++|+||||||||||+++|+|.+++.. ..+|+|.++|.++.....+ +.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987422 1389999999998665421 3699999997
Q ss_pred -CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 236 -~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
.+.|.+||.+++........... ..+....++.+|+.+||.+..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999876543211000 0112234677899999975221
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
+-+.....|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.+++.++|+...+..++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 112455689999999999999999999999999999999999999999999998653 345677788999999999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 324
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8.2e-35 Score=315.33 Aligned_cols=195 Identities=25% Similarity=0.378 Sum_probs=165.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-ccceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-PERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 243 (1206)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 999999998775421 13579999999988999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.+.....+. ....++.+++.+||.+..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999886432110 01124567889999877766544 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ .+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 34 4555577888888899999999999999
Q ss_pred EEec
Q 000971 404 VYQG 407 (1206)
Q Consensus 404 v~~G 407 (1206)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 325
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=321.50 Aligned_cols=215 Identities=25% Similarity=0.270 Sum_probs=176.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478999998774 246999999999999999999999999999999999964321 1379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc----cccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 975 (1206)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. ......++.+.++++.+++.+. .++.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87542 2335679999999988874 999999987544321 1223345568889999988532 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 789988875
No 326
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=324.15 Aligned_cols=219 Identities=22% Similarity=0.290 Sum_probs=178.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 904 (1206)
.+.++||+++++ .+.+|+||||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 579999999874 24699999999999999999999999999999999997653 13589999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 000971 905 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1206)
Q Consensus 905 ~~~~~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 980 (1206)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ..+.++.+..+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567999999988887 899999987643221 12334444567888999998753221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57889999999985 799
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 327
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=325.73 Aligned_cols=218 Identities=22% Similarity=0.379 Sum_probs=175.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ +++.+|+|||++|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 488999998873 124699999999999999999999999999999999998764 479999999876
Q ss_pred CcccccceEEEeecCCCCC--CCCCHHHHHHHhhhhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 908 KQETFARISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~--~~~Tv~e~l~~~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
.....++.++|++|++.+. ...+++|++.+...-... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997653 234788888653211000 01112233456788999999988877764 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||||++||+||+.+|+||+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577899999776 4 7999998
Q ss_pred CCC
Q 000971 1065 PLG 1067 (1206)
Q Consensus 1065 ~~~ 1067 (1206)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 328
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.47 Aligned_cols=217 Identities=21% Similarity=0.410 Sum_probs=174.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC-------------------Ccc
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------------------VPE 225 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~-------------------~~~ 225 (1206)
.++|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999987 99999999887542 113
Q ss_pred ceEEEecCCC--CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHH
Q 000971 226 RTAAYISQHD--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYL 303 (1206)
Q Consensus 226 ~~~~yv~Q~d--~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l 303 (1206)
+.++||+|++ .+++ .||+||+.|+....+.. . .+....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHH
Confidence 5799999986 3554 59999998864322110 0 01122456788
Q ss_pred HHcCCc-ccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEe
Q 000971 304 KVLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLL 382 (1206)
Q Consensus 304 ~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~ 382 (1206)
+.+||+ +..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++
T Consensus 161 ~~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEe
Confidence 999996 34443 3457999999999999999999999999999999999999999999998754 3 45566688
Q ss_pred cCchhHHhhcCeEEEEcCCeEEEecChHHHHH---HHHhcCCCCCCC
Q 000971 383 QPAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFESMGFKCPKR 426 (1206)
Q Consensus 383 q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~~ 426 (1206)
|..+++..+||+|++|++|++++.|+++++.. .++..|+.+|..
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~ 280 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRV 280 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChH
Confidence 88888999999999999999999999987642 344556655543
No 329
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.7e-34 Score=353.46 Aligned_cols=220 Identities=23% Similarity=0.340 Sum_probs=182.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ ++.+|+||||++++|+++||+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788988773 24699999999999999999999999999999999997654224899999998764
Q ss_pred ccc----ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-ccccCCCCCCCCC
Q 000971 909 QET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLS 982 (1206)
Q Consensus 909 ~~~----~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LS 982 (1206)
... .++.+|||+|++.+++.+||.||+.+....+... ....++.++.++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356899999998889999999998864332111 122334456789999999998654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||||+||+||+.+|+||||||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999987 57788999999986 68899
Q ss_pred EcCCCc
Q 000971 1063 VGPLGR 1068 (1206)
Q Consensus 1063 ~g~~~~ 1068 (1206)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 888653
No 330
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.3e-34 Score=320.94 Aligned_cols=205 Identities=23% Similarity=0.353 Sum_probs=170.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-----------ccceEEEecC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----------PERTAAYISQ 233 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-----------~~~~~~yv~Q 233 (1206)
..+|+|+|+.|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35999999999999999999999999999999999999887 999999999875321 1357999999
Q ss_pred CCCCCCCCCHHHHHHHHhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000971 234 HDNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1206)
Q Consensus 234 ~d~~~~~lTV~Etl~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1206)
++.+++.+||+||+.++... .+. .. .+....+..+++.+||.+..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGE-PK---------------------------------EEATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCC-CH---------------------------------HHHHHHHHHHHHHcCCcchh
Confidence 99899999999999885321 110 00 01122356778899998776
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhc
Q 000971 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1206)
Q Consensus 313 dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~f 392 (1206)
|+.+ +.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|..+++.+++
T Consensus 139 ~~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~ 211 (250)
T PRK11264 139 TSYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVA 211 (250)
T ss_pred hCCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhc
Confidence 6544 47999999999999999999999999999999999999999999998764 3 445666788888999999
Q ss_pred CeEEEEcCCeEEEecChHHHH
Q 000971 393 DDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1206)
|+|++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988763
No 331
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=319.29 Aligned_cols=215 Identities=25% Similarity=0.324 Sum_probs=174.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1206)
.+.++||++.++ .+.+|+|+||+|++||++||+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478999998774 2469999999999999999999999999999999999643 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ...++.+||++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999988887 6999999876443321 112223445778888888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 589999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 332
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.6e-34 Score=317.04 Aligned_cols=204 Identities=34% Similarity=0.541 Sum_probs=165.2
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC---CCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGE 240 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~---~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1206)
.+++|+|+|++|++||+++|+||||||||||+++|+|.++ ++ +|+|.++|.++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3579999999999999999999999999999999999998 65 99999999987643345679999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHH-HHHHcCCcccccccccCc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 319 (1206)
+||+||+.|+..........+ . .....++. .++.+++.+..++.
T Consensus 96 ~tv~enl~~~~~~~~~~~~~~---~----------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 140 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSSD---A----------------------------IRKKRVEDVLLRDLALTRIGGNL---- 140 (226)
T ss_pred CcHHHHHHHHHHhhcccccch---H----------------------------HHHHHHHHHHHHhhcchhhhccc----
Confidence 999999998754322100000 0 00011233 78888887666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .+.|+|++.|++..++.++||+|++|+
T Consensus 141 -~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 -VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred -ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 447999999999999999999999999999999999999999999998764 355666655544468999999999999
Q ss_pred CCeEEEec
Q 000971 400 DGQIVYQG 407 (1206)
Q Consensus 400 ~G~iv~~G 407 (1206)
+|++++.|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 333
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.3e-34 Score=318.83 Aligned_cols=205 Identities=19% Similarity=0.339 Sum_probs=171.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNHIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1206)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999887 999999999876421 1356999999998899
Q ss_pred CCCHHHHHHHHhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 240 ~lTV~Etl~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
.+||+||+.|+.. ..+.. . .+....++++++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 9999999988542 11100 0 011123567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+.|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.. .+ ++|+.++|+.+++..+||++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998754 34 55666778888898999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 334
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.2e-34 Score=315.20 Aligned_cols=192 Identities=25% Similarity=0.349 Sum_probs=160.2
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
+.+.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchh---------hcccccCCCCCcH
Confidence 456799999999999999999999999999999999998663 48999999975421 1112234567999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
+||+.+....+. ......++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987654321 233444556889999999988877764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 1012 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|+.++..+.+.|+++.++|.|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 57778999999985 7887654
No 335
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.7e-35 Score=314.32 Aligned_cols=192 Identities=27% Similarity=0.362 Sum_probs=160.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCC-CCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDN-HIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999987 9999999998754323457999999864 3557899
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.+.....+. ....++.+++.+||.+..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCch-----h
Confidence 9999875432100 01134668899999887776554 6
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ . +.+|+.++|..+++.+++|+|++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 3 44555577888888899999999999997
Q ss_pred E
Q 000971 404 V 404 (1206)
Q Consensus 404 v 404 (1206)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 336
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.6e-33 Score=353.48 Aligned_cols=210 Identities=26% Similarity=0.396 Sum_probs=177.5
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++||+|+|+. ..+.+|+|+|++|+|||.+||+||||||||||+++|+|...+ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999999862 124599999999999999999999999999999999998774 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.+|||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 653 456788999999998885 69999997642 1 222 33478888888887654 4445544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..|++.|++ .++|+|+++|+++ ....+|+|++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999986 4677999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 799999984
No 337
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.62 Aligned_cols=205 Identities=23% Similarity=0.351 Sum_probs=169.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC----------------------
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF---------------------- 222 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~---------------------- 222 (1206)
..+|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 89999998764210
Q ss_pred -----CccceEEEecCCC-CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHH
Q 000971 223 -----VPERTAAYISQHD-NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEAN 296 (1206)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~ 296 (1206)
..++.++||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1135799999985 34556799999998754322100 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000971 297 VITDYYLKVLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSG 375 (1206)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~ 375 (1206)
..++.+++.+||+ +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3466789999996 555544 457999999999999999999999999999999999999999999998763 3 4
Q ss_pred eEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHH
Q 000971 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 376 t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1206)
.+|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666888999999999999999999999999998864
No 338
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.7e-35 Score=323.78 Aligned_cols=211 Identities=27% Similarity=0.420 Sum_probs=163.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehH
Confidence 357888877631 123599999999999999999999999999999999998763 4799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-C-----CCCCC
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGVS 979 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~~ 979 (1206)
. ..+++.+||++|++.+++ .||.||+.+... ..... .+.+.++..++.+..+.+. | ...+.
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 137 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSME----RVIEAAKLAGAHDFISELPEGYDTIVGEQGA 137 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHH----HHHHHHHHcCcHHHHHhCcccccchhhcCCC
Confidence 2 234567999999987764 699999977431 11111 1233333333333222110 0 01246
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.|||||||||+|||+|+.+|++|+|||||+|||+.+...+.+.|++++ +|+|||+++|++. ++ ..+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999986 4899999999987 45 56999999985 78
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9998874
No 339
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.9e-34 Score=352.94 Aligned_cols=211 Identities=21% Similarity=0.311 Sum_probs=181.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||+|++|+++||+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999998874 24699999999999999999999999999999999998663 479999999875
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
... . .++.+||++|++.+++.+||+||+.|... . ....++.+.++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 421 1 12458999999999999999999987531 1 1233456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++|.|||+++|++. .+...||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999987 57788999999986 789999
Q ss_pred cCCC
Q 000971 1064 GPLG 1067 (1206)
Q Consensus 1064 g~~~ 1067 (1206)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 340
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=324.97 Aligned_cols=216 Identities=25% Similarity=0.377 Sum_probs=175.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCC-CCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD-NHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1206)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999987 9999999999865432 35799999986 36778
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||.||+.|+....+... .+....++++++.+||.+..++.++
T Consensus 97 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13635 97 ATVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH--- 139 (279)
T ss_pred ccHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc---
Confidence 899999998654321100 0112346778999999887776654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|..+++. .+|+|++|++
T Consensus 140 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 140 --RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 699999999999999999999999999999999999999999999886533 455555667777775 5999999999
Q ss_pred CeEEEecChHHHHH---HHHhcCCCCC
Q 000971 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1206)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~cp 424 (1206)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887653 3344455443
No 341
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.8e-35 Score=370.06 Aligned_cols=209 Identities=27% Similarity=0.386 Sum_probs=178.4
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|+|+. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 46999999999851 124699999999999999999999999999999999998774 48999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 654 456788999999999876 59999998752 1 22 23478899999987654 4455544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999876 689999999985 4677999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 799999984
No 342
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.5e-34 Score=322.03 Aligned_cols=224 Identities=25% Similarity=0.330 Sum_probs=179.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++||++.+.... ..+. ..++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 67889988774100 0000 0125699999999999999999999999999999999997653 4899999998654
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 000971 909 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~~------~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 979 (1206)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2356799999997 3567799999987643211 1223444556789999999996 455655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
.||+|||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+|++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999987 57778999999985 7
Q ss_pred EEEEEcCCC
Q 000971 1059 QEIYVGPLG 1067 (1206)
Q Consensus 1059 ~~~~~g~~~ 1067 (1206)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 343
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=322.57 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=174.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 904 (1206)
.+.++|+++.+. ++.+|+|+||.|++|+++||+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 589999998873 24699999999999999999999999999999999997542 13479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 975 (1206)
.++.. ..+++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.++|.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654331 122 23456889999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEE-EE
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF-LM 1054 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~-ll 1054 (1206)
+..||||||||++||++|+.+|+||||||||+|||+.+...+.+.|+++++ ++|||+++|++. .+...+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999987 5777899976 55
Q ss_pred ecCcEEEEEcCC
Q 000971 1055 KRGGQEIYVGPL 1066 (1206)
Q Consensus 1055 ~~gg~~~~~g~~ 1066 (1206)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4789988874
No 344
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=326.93 Aligned_cols=205 Identities=20% Similarity=0.286 Sum_probs=169.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCC--
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHD-- 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d-- 235 (1206)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 999999999885421 235799999985
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000971 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1206)
.+++ .||.||+.|+....+... .+....++.+++.+||. +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3454 599999998643221100 01122356788999996 55654
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
. ++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|..+++.+++|+
T Consensus 142 ~-----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 S-----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred C-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 4 4579999999999999999999999999999999999999999999998653 356666688888899999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 345
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-35 Score=312.66 Aligned_cols=223 Identities=25% Similarity=0.343 Sum_probs=193.4
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d 235 (1206)
....-++|+|+.|+.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++..+.. ++.+++|+|..
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 3456789999999999999999999999999999999999998 9999999999876654 25799999999
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000971 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1206)
.++|+.||.||..|+.+.+|+... +.+.++.+.|+..||+..++..
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY 161 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC
Confidence 999999999999999998886421 2334567889999999988865
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
+ ..||||+||||.+||||+.+|+||+||||+|+|||--+.++.+-|.++-...+ .||+.++|+.+|++++.|+|
T Consensus 162 p-----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rI 235 (386)
T COG4175 162 P-----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRI 235 (386)
T ss_pred c-----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceE
Confidence 4 47999999999999999999999999999999999999999988877766554 55666999999999999999
Q ss_pred EEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000971 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v 436 (1206)
.+|.+|+||..|++++++. .|...-+++|...+
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999873 45555566666554
No 346
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=314.27 Aligned_cols=231 Identities=26% Similarity=0.333 Sum_probs=188.7
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC-C-CCCceeEEEECCeeCCCCCc-------cceEEEecCC
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD-S-SLKVSGRVTYNGHDMGEFVP-------ERTAAYISQH 234 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~-~-~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~ 234 (1206)
...+++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.|+|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33467899999998765543 2479999999
Q ss_pred C--CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000971 235 D--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1206)
Q Consensus 235 d--~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1206)
+ .+.|.+||.+.+.-..+.+.... ...++...+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 4 67899999998876554321100 0112344567889999998643
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhc
Q 000971 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1206)
Q Consensus 313 dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~f 392 (1206)
. +-+.+...|||||||||.||.||+.+|++|+.|||||+||..+..+|++.|+++.+ ..+++++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 34567889999999999999999999999999999999999999999999999987 56788888999999999999
Q ss_pred CeEEEEcCCeEEEecChHHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000971 393 DDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1206)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~ 437 (1206)
|+|+||+.|+||+.|+.+++. ..|.|.-+...+..+.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P 258 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLP 258 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCc
Confidence 999999999999999999874 3455544444444433
No 347
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=352.02 Aligned_cols=216 Identities=28% Similarity=0.328 Sum_probs=181.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++ ++.+|+||||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 378899998874 24699999999999999999999999999999999998653 479999999875
Q ss_pred Cc----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 908 KQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.+||++|++.+++.+||.||+.+....+........+.++.++++++.++|.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 32 1235679999999988999999999988532111111223444567899999999987766653 57999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~ 1063 (1206)
|||||++||++|+.+|+||||||||+|||+.+...+++.|++++++|+|||+++|++. ++...+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999987 57788999999986 688776
Q ss_pred cC
Q 000971 1064 GP 1065 (1206)
Q Consensus 1064 g~ 1065 (1206)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 348
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=313.95 Aligned_cols=197 Identities=31% Similarity=0.448 Sum_probs=166.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1206)
.++|+|+|+.+++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999987 999999998875432 1357999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 89 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 129 (211)
T cd03264 89 VREFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKIG----- 129 (211)
T ss_pred HHHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----
Confidence 9999998654321100 0012235678899999887776554
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++. + ++|+.++|+.+++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 566668888888889999999999999
Q ss_pred EEEec
Q 000971 403 IVYQG 407 (1206)
Q Consensus 403 iv~~G 407 (1206)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 349
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=322.41 Aligned_cols=215 Identities=19% Similarity=0.235 Sum_probs=175.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITIS 903 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 903 (1206)
..+.++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|...+. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3689999998874 246999999999999999999999999999999999975321 247999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccC
Q 000971 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVG 974 (1206)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 974 (1206)
|.++.. ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+.++++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 2345679999999887764 99999987643321 11 122345677888888743 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEE
Q 000971 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1206)
Q Consensus 975 ~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll 1054 (1206)
+..|||||||||+|||||+.+|+||||||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999997 588899999999
Q ss_pred e--------cCcEEEEEcCC
Q 000971 1055 K--------RGGQEIYVGPL 1066 (1206)
Q Consensus 1055 ~--------~gg~~~~~g~~ 1066 (1206)
+ +.|++++.|+.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred ecccccccccCceEEEeCCH
Confidence 7 25899999986
No 350
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5.5e-34 Score=318.25 Aligned_cols=220 Identities=24% Similarity=0.296 Sum_probs=176.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478999998773 2369999999999999999999999999999999999621113579999999875
Q ss_pred Ccc---cccc-eEEEeecCCCCCCCCCHHHHHHHhhhhcCC----CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 000971 908 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1206)
Q Consensus 908 ~~~---~~~~-~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 978 (1206)
... ..++ .++|++|++.+++.+|+.+++.+....... ......+..+.+.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 1222 478999999999999999998765332110 0112223345678899999997 35555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHh-cCeEEEEecC
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRG 1057 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~-~d~v~ll~~g 1057 (1206)
..||||||||++||+||+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 259999999999999999999999999999999999999999999998877999999999986 35454 799999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999985
No 351
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4e-34 Score=315.73 Aligned_cols=202 Identities=26% Similarity=0.311 Sum_probs=166.9
Q ss_pred ccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--ccceEEEec-CCCCCCC
Q 000971 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYIS-QHDNHIG 239 (1206)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~~~yv~-Q~d~~~~ 239 (1206)
..+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+..... .++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4467999999999999999999999999999999999999987 999999998754321 235789997 5567788
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+||+|++.+.....+... .+....++.+++.+||++..++.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 9999999988654322100 0111235678889999988887665
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++.. +.+|+.++|..+++.+++|++++|.
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEe
Confidence 699999999999999999999999999999999999999999999886533 4455557788888899999999999
Q ss_pred CCeEEEec
Q 000971 400 DGQIVYQG 407 (1206)
Q Consensus 400 ~G~iv~~G 407 (1206)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 352
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-34 Score=324.45 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=174.5
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.|+|+++.++. +...+|+||||.|++||+++|+||||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999998842 12359999999999999999999999999999999999864 369999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCC------CCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGL------PGV 978 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~------~~~ 978 (1206)
.. ...++.++||+|++.+++ .|++||+.+.. ... ++.++++++.+||.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999999887 59999995321 111 23478889999998777665431 234
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||+|||||++|||||+.+|+||+|||||++||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999985 34 45999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
+++++|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 353
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=321.39 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=168.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 9999999998864322 457999999963 6778
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999988643211100 011224577889999988777655
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+++.|++++.. ++++|+.++|..+++. .+|+|++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999988653 3344444556666664 7999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987754
No 354
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=322.46 Aligned_cols=215 Identities=21% Similarity=0.227 Sum_probs=174.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1206)
.+.++|+++.++ .+.+|+|+|++|++|+++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999998874 1359999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc----cccccccCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 975 (1206)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..+..+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999988877 599999988643321 112223345577788877653 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 976 ~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 355
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.9e-34 Score=316.05 Aligned_cols=209 Identities=22% Similarity=0.364 Sum_probs=170.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEc
Confidence 488999998773 24699999999999999999999999999999999997653 479999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCH
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 983 (1206)
.. ..+++.++|++|++.+++ .|++||+.+....+.. . ..++.++++++.+++. ...+.. +..||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 224567899999988876 5999999875433211 1 1134578899999996 355555 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++ .+ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 899999999986 35 56999999964444444
Q ss_pred Ec
Q 000971 1063 VG 1064 (1206)
Q Consensus 1063 ~g 1064 (1206)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 356
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.6e-33 Score=351.44 Aligned_cols=122 Identities=24% Similarity=0.294 Sum_probs=102.5
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCC---cEEEE
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1004 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P---~iL~L 1004 (1206)
+||.|++.|...+.. .....+.|+.+||.. ..++. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 789999888654321 112467899999976 34554 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe-----cCcEEEEEcCC
Q 000971 1005 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1206)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~-----~gg~~~~~g~~ 1066 (1206)
||||+|||+.....+++.|+++.+.|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346799999995 47899999985
No 357
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=317.83 Aligned_cols=206 Identities=21% Similarity=0.348 Sum_probs=171.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++..++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 9999999998765432 3569999999988999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.+..+....... .+....++.+++.+||++..+..+
T Consensus 93 ~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcch----
Confidence 9999999875432110000 011234567889999987655544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+.+.. .+ .+|+.++|...++.+++|+|++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SG-LGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 47999999999999999999999999999999999999999999988754 34 4555577777889999999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 358
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=324.55 Aligned_cols=207 Identities=25% Similarity=0.339 Sum_probs=170.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCC--CC---ccceEEEecCCCC-CC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--FV---PERTAAYISQHDN-HI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1206)
..+|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .. .++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999987 9999999998742 11 1357999999863 34
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
...||+||+.++....+... .+....++++++.+||.+..++.+
T Consensus 96 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 139 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKPT-- 139 (283)
T ss_pred ccccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCCc--
Confidence 56899999988643221100 011224577899999987776554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
+.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++.. +.+|+.++|..+++..+||+|++|
T Consensus 140 ---~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 140 ---HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999886533 445566788888888999999999
Q ss_pred cCCeEEEecChHHHHH
Q 000971 399 SDGQIVYQGPRELVLE 414 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1206)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999987653
No 359
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=334.53 Aligned_cols=195 Identities=24% Similarity=0.362 Sum_probs=168.9
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC------C-ccceEEEecCCCCCCCCCC
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF------V-PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~------~-~~~~~~yv~Q~d~~~~~lT 242 (1206)
|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... . .++.++|++|+..++|.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999887531 1 2467999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999999853200 0113567889999987777655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999886533 4556668888899999999999999999
Q ss_pred EEEecChHHHH
Q 000971 403 IVYQGPRELVL 413 (1206)
Q Consensus 403 iv~~G~~~~~~ 413 (1206)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999874
No 360
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=5.5e-34 Score=318.37 Aligned_cols=215 Identities=26% Similarity=0.280 Sum_probs=173.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc-
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP- 906 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 906 (1206)
.+.++||++.++ ...+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 378899988774 23589999999999999999999999999999999998764 47999999976
Q ss_pred ----CCcc-------cccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCc-cccccc
Q 000971 907 ----KKQE-------TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSL 972 (1206)
Q Consensus 907 ----~~~~-------~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~ 972 (1206)
+... ..++.++|++|++. +.+.+|+.|++.+..... . .....+..+.++++++.+++. ...++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 11346899999974 345679999986532111 1 011123446788999999996 355555
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeE
Q 000971 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 973 ~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. .+...+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 577789999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 789998874
No 361
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=328.07 Aligned_cols=207 Identities=20% Similarity=0.243 Sum_probs=174.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--C
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~ 236 (1206)
+.+|+|||+.|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999886 9999999999865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1206)
+.|.+||.+++.+..+...... ..+....+..+++.+||.. ..+.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 8899999999987654321000 0012234677899999963 4554
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
.++.|||||||||+||+||+.+|++|++||||+|||..+..+|++.|+++.+. .+++++.++|+...+..++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 44579999999999999999999999999999999999999999999988653 3566777899999999999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 362
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-34 Score=315.64 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=166.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999987 9999999998765432 3469999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-CcccccccccCc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1206)
+||+||+.++....+.. .....+.+++.++ +.+..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCC----
Confidence 99999998865422100 0011234555665 44444444
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
++.|||||||||+||++|+.+|++++|||||+|||+.+..++.+.|+++++. .+++|+.++|..+++..++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4579999999999999999999999999999999999999999999987653 34556667788889999999999999
Q ss_pred CCeEEEecChHHH
Q 000971 400 DGQIVYQGPRELV 412 (1206)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1206)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998765
No 363
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=318.94 Aligned_cols=201 Identities=26% Similarity=0.370 Sum_probs=167.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999887 99999999987542 34589999999889999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.+.....+... .+....++.+++.+||.+..+..+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99988643221100 001123567889999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1206)
||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++... +++|+.++|+..++..+||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999875433 4555667888889999999999998 599
Q ss_pred EEEecChH
Q 000971 403 IVYQGPRE 410 (1206)
Q Consensus 403 iv~~G~~~ 410 (1206)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988653
No 364
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=320.32 Aligned_cols=218 Identities=19% Similarity=0.248 Sum_probs=174.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--C-eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 904 (1206)
.+.++||++.++ ...+|+|||++|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 488999998874 23699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~-----~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++. ...+++.+||++|++.+++ .|+.||+.+....+. .. ...++.+.++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8652 1234567999999988877 599999987653321 11 22334577788888875321111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec---
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR--- 1056 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~--- 1056 (1206)
.||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999875 589999999987 68899999999982
Q ss_pred -----CcEEEEEcCC
Q 000971 1057 -----GGQEIYVGPL 1066 (1206)
Q Consensus 1057 -----gg~~~~~g~~ 1066 (1206)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799999875
No 365
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.6e-34 Score=312.83 Aligned_cols=195 Identities=27% Similarity=0.388 Sum_probs=163.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 9999999998765421 35699999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVPP----------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 99999999998654322100 001123567888999987776654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ . +++|+.++|..+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 445666778888888999999999
Q ss_pred cCCeE
Q 000971 399 SDGQI 403 (1206)
Q Consensus 399 ~~G~i 403 (1206)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 366
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-34 Score=301.65 Aligned_cols=168 Identities=28% Similarity=0.415 Sum_probs=149.2
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ ...+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 5788887763 13599999999999999999999999999999999998653 47999999987543
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
..+++.++|++|++.+++..|+.||+. ||+||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999873 8999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999987 577789999999864
No 367
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.6e-35 Score=361.97 Aligned_cols=211 Identities=27% Similarity=0.418 Sum_probs=179.1
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|.|+. ++.+|+|+||+++|||.+||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 46999999999862 34699999999999999999999999999999999998774 48999999988
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~~g~~ 976 (1206)
+.. ..+++.++||+|++.++. -||+||+.|+.. +.++ +.++++++..++.+ -.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATD----EEIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccceecCC
Confidence 654 456788999999999987 899999998631 1222 34666766665544 457778743
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||||||||++|||||+++|+||+||||||+||+.+...|++.++++. +|+|+|+++|+++. ...+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999876 57999999999863 455999999996
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 689999985
No 368
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.5e-34 Score=314.09 Aligned_cols=201 Identities=26% Similarity=0.332 Sum_probs=162.8
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--CC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--NH 237 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d--~~ 237 (1206)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 9999999998865431 35799999997 46
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1206)
++.+||+||+.+.....+..... ......++.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK--------------------------------EARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH--------------------------------HHHHHHHHHHHHHCCCChhHhhCCc
Confidence 67899999998865432110000 00011124678888985 4555444
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++...+ .+|+.++|..+++..++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 46999999999999999999999999999999999999999999998865324 455557777888888999999
Q ss_pred EEcCCeEEEec
Q 000971 397 LLSDGQIVYQG 407 (1206)
Q Consensus 397 lL~~G~iv~~G 407 (1206)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 369
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=325.31 Aligned_cols=205 Identities=23% Similarity=0.337 Sum_probs=169.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCC-
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~- 236 (1206)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999987 999999999875321 1246999999862
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1206)
.+..+||+||+.|+....+... .+....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999998653221100 01122456789999996 455555
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
+ +.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999998753 3 566666889999999999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 370
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-34 Score=313.25 Aligned_cols=196 Identities=24% Similarity=0.350 Sum_probs=160.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------c-ceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------E-RTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~-~~~~yv~Q~d~~ 237 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... + +.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998865432 1 469999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||+||+.+......... .+....+..+++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 999999999998643211000 001123456889999987666554
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
..|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|+++++..+.| |+.++|...++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTS-FLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHh-hcCEEEE
Confidence 4699999999999999999999999999999999999999999999886533444 555667766664 5799999
Q ss_pred EcCCeEE
Q 000971 398 LSDGQIV 404 (1206)
Q Consensus 398 L~~G~iv 404 (1206)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 371
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=350.28 Aligned_cols=206 Identities=25% Similarity=0.318 Sum_probs=174.1
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCCCCCCCC
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSPFV 929 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~~~ 929 (1206)
+.+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|.++.. ..+++.+||++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998663 47999999987532 12345689999998888899
Q ss_pred CHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000971 930 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1009 (1206)
Q Consensus 930 Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTs 1009 (1206)
||+||+.+..........+.++..+.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123344567899999999988777764 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCCc
Q 000971 1010 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1206)
Q Consensus 1010 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~~ 1068 (1206)
|||+.+...+++.|+++++.|.|||+++|++. ++...||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 57788999999985 79999988643
No 372
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-32 Score=349.11 Aligned_cols=212 Identities=26% Similarity=0.432 Sum_probs=179.4
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|+|+. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 124599999999999999999999999999999999998774 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+.. |+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 456788999999998886 59999998742 1 222 33478888888886644 4455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ....+|+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999875 4899999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999974
No 373
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=316.79 Aligned_cols=216 Identities=23% Similarity=0.312 Sum_probs=175.3
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--C--eeEEEEEEc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G--YITGNITIS 903 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~--~~~G~i~i~ 903 (1206)
.+.++++++++. ++.+|+||||++.+||+++|+||||||||||+++|+|...+ | .+.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 378899998764 34699999999999999999999999999999999997543 2 123666666
Q ss_pred CccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccCCC
Q 000971 904 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGLP 976 (1206)
Q Consensus 904 g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~ 976 (1206)
|.+... ..+++.++|++|++.+++.+|++||+.+...... ....++.++.+.++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665422 2345679999999999999999999988643221 1123344567889999999964 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
+..||+|||||++|||+|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+...+|++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999864 799999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799988875
No 374
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=319.41 Aligned_cols=194 Identities=21% Similarity=0.297 Sum_probs=165.0
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHH
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRE 245 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1206)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~~--~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAEA--REDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHHh--hCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999987 99999999876432 457999999998899999999
Q ss_pred HHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCC
Q 000971 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1206)
Q Consensus 246 tl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1206)
|+.+... . . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~--~---~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLK--G---Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhccc--c---h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 9987421 0 0 0012456788999987666544 4799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000971 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1206)
Q Consensus 326 GGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1206)
|||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++....+ .+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999999999998765334 455667888888889999999999999999
Q ss_pred ecChH
Q 000971 406 QGPRE 410 (1206)
Q Consensus 406 ~G~~~ 410 (1206)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 375
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.6e-34 Score=311.72 Aligned_cols=194 Identities=30% Similarity=0.411 Sum_probs=162.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
..+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 45999999999999999999999999999999999999887 9999999998865432 35799999999889
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.++....+... ......++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999998754321100 001123567889999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. .+ .+|+.++|..+++..+||++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 45666778888999999999999
Q ss_pred cCCe
Q 000971 399 SDGQ 402 (1206)
Q Consensus 399 ~~G~ 402 (1206)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 376
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=318.39 Aligned_cols=206 Identities=32% Similarity=0.488 Sum_probs=171.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999887 9999999998765432 25689999998888889
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.++........ .+....++.+++.+||.+..++.++
T Consensus 92 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGLSR----------------------------------AEDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCCCc----------------------------------HHHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 99999988542111000 0011235678899999876666554
Q ss_pred ccCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 322 RGISGGERKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~------~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
.|||||||||+||++|+ .+|++++|||||+|||+.+...+.+.|+++.+..+ .+|+.++|+..++.+++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEE
Confidence 69999999999999999 59999999999999999999999999998863334 45666778888899999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987664
No 377
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-34 Score=310.49 Aligned_cols=197 Identities=28% Similarity=0.375 Sum_probs=165.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCc
Confidence 67888887763 24699999999999999999999999999999999997653 4799999997643
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 000971 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1206)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqr 988 (1206)
...+++.++|++|++.+++.+||.||+.+....+. .. .+.+.++++.++|.+..+..+ ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22255678999999888888999999987543321 11 234789999999987666653 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 989 l~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.. |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~--~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLPG--ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhcc--CcEEeec
Confidence 99999999999999999999999999999999999998878999999999986 3443 8888774
No 378
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-34 Score=360.44 Aligned_cols=210 Identities=21% Similarity=0.342 Sum_probs=179.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+|++|.|+. ++.+|+|+|++++|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999999851 13599999999999999999999999999999999998875 47999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccc-------cccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ-------SLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-------~~~g~~ 976 (1206)
+.+ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+..+ +.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4567889999999999875 9999998752 122 234888999999876544 445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++.+ ++|||+++|+++ ....+|+|++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998754 699999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 799999985
No 379
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-34 Score=316.65 Aligned_cols=219 Identities=21% Similarity=0.279 Sum_probs=176.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1206)
.+.++||++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 377899988763 2469999999999999999999999999999999999643 1 12479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 979 (1206)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+...+.+.++++.+++.+........ .+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87532 1345679999999888874 99999987643221 112333456788999999986432222221 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||+|||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++++ |+|||+++|++. ++...+|++++|.+ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999854 899999999987 68888999999985 79
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999874
No 380
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=315.77 Aligned_cols=203 Identities=25% Similarity=0.390 Sum_probs=166.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 3469999999989999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccCc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1206)
+||+||+.++..... . + + ....++.+++.+ +|.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999988542110 0 0 0 001233445555 465544443
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
+..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+. +|+.++|..+++.+++|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGM-TIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCC-EEEEEeCcHHHHHhhCCEEEEEe
Confidence 347999999999999999999999999999999999999999999998764 344 45557788889999999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 381
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=9.9e-34 Score=315.44 Aligned_cols=219 Identities=26% Similarity=0.303 Sum_probs=171.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.++ ++.+|+|+|+.|++|+++||+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56889988774 23599999999999999999999999999999999997421135799999998753
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHhh-hhcC--C-CCCCHHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 000971 909 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSA-WLRL--P-PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1206)
Q Consensus 909 ~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a-~lr~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 979 (1206)
.. . .++.++|++|++.+++.+|+.+++.+.. .++. . ..........+++++++.+++. +..+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 2346899999988888888777654321 1110 0 0112223355678899999995 3444442 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHh-cCeEEEEecCc
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1058 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~-~d~v~ll~~gg 1058 (1206)
.||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 35454 899999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89999875
No 382
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.3e-34 Score=316.16 Aligned_cols=206 Identities=24% Similarity=0.391 Sum_probs=169.0
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCC-----ccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1206)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999753 123899999999876421 135799999998888
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCADT 314 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1206)
+ +||+||+.+.....+.... .+....++.+++.+||. +..+.
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999986543210000 01112356788999997 55554
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
. ++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|...++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 4 457999999999999999999999999999999999999999999998754 3 4566678888889999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|++++.|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 383
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.3e-34 Score=314.63 Aligned_cols=210 Identities=25% Similarity=0.398 Sum_probs=169.4
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++. ..+.+|+|+||+|++|++++|+||||||||||+++|+|...+ ..|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 68 (220)
T cd03245 2 RIEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDI 68 (220)
T ss_pred eEEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEh
Confidence 3678888877631 123599999999999999999999999999999999998653 479999999865
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccC------CCCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LPGV 978 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g------~~~~ 978 (1206)
.. ...++.++|++|++.+++ .||.|++.+... ... ...+.++++.+++.+..+..+. ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 69 RQLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred HHCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 32 223557899999988776 699999976421 111 2246678888999877666431 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. . .+.+|++++|++ |
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g 214 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-G 214 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-C
Confidence 589999999999999999999999999999999999999999999998764 89999999986 3 478999999986 6
Q ss_pred EEEEEc
Q 000971 1059 QEIYVG 1064 (1206)
Q Consensus 1059 ~~~~~g 1064 (1206)
++++.|
T Consensus 215 ~i~~~~ 220 (220)
T cd03245 215 RIVADG 220 (220)
T ss_pred eEeecC
Confidence 777654
No 384
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.8e-34 Score=331.35 Aligned_cols=199 Identities=24% Similarity=0.402 Sum_probs=169.6
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCCCCCCCC
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1206)
|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999987 999999999875321 2457999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.|+.+... . .+....++.+++.+||++..+..+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998653110 0 001123567889999988777655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|..+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999986533 4556667888889999999999999999
Q ss_pred EEEecChHHHH
Q 000971 403 IVYQGPRELVL 413 (1206)
Q Consensus 403 iv~~G~~~~~~ 413 (1206)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 385
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.5e-34 Score=314.10 Aligned_cols=201 Identities=26% Similarity=0.331 Sum_probs=165.9
Q ss_pred eeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHH
Q 000971 168 LKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETL 247 (1206)
Q Consensus 168 L~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~Etl 247 (1206)
|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998865433 248999999999999999999
Q ss_pred HHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChh
Q 000971 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1206)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1206)
.+........ ... .+....++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~~--------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSK------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcccC--------CCH------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 8863210000 000 0112235678899999877776554 69999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000971 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1206)
Q Consensus 328 qkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1206)
|||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++.. +.+|+.++|..+++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999876533 445566788888899999999999999999988
Q ss_pred ChHH
Q 000971 408 PREL 411 (1206)
Q Consensus 408 ~~~~ 411 (1206)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6543
No 386
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.1e-34 Score=306.21 Aligned_cols=178 Identities=26% Similarity=0.327 Sum_probs=150.9
Q ss_pred eEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-----ccccceEEEeecCCC-CCC
Q 000971 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 927 (1206)
Q Consensus 854 ~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~-~~~ 927 (1206)
+.+|++||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999998763 48999999987531 123567899999973 233
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000971 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1206)
Q Consensus 928 ~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEP 1007 (1206)
..||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 479999998865332 1233444567899999999988777764 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000971 1008 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPG 1041 (1206)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 1041 (1206)
|+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 387
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.3e-34 Score=317.00 Aligned_cols=197 Identities=25% Similarity=0.372 Sum_probs=168.4
Q ss_pred EeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHH
Q 000971 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 932 (1206)
Q Consensus 856 vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~Tv~ 932 (1206)
+|+||||++++|++++|+||||||||||+++|+|... .+|+|.++|.+... ..+++.+||++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 27999999987542 22345689999998888889999
Q ss_pred HHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 000971 933 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1005 (1206)
Q Consensus 933 e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~-------~P~iL~LD 1005 (1206)
||+.+.... ....+...+.++++++.++|.+..++.+ ..||+|||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1222333556889999999987777663 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1006 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 57889999999985 789998875
No 388
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8e-34 Score=314.97 Aligned_cols=211 Identities=22% Similarity=0.346 Sum_probs=171.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999887 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++..... ..+....... ..+....++++++.+||++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFRL------------------------SAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhccc--cccccccccc------------------------HHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 999999998643110 0000000000 00112346778999999877766554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|..+++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999998753 3 4566678888899999999999999
Q ss_pred CeEEEecChHHH
Q 000971 401 GQIVYQGPRELV 412 (1206)
Q Consensus 401 G~iv~~G~~~~~ 412 (1206)
|++++.|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999998765
No 389
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.8e-34 Score=313.41 Aligned_cols=204 Identities=23% Similarity=0.304 Sum_probs=167.2
Q ss_pred EeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCC----CCCceeEEEECCeeCCCCCcc-ceEEEecCCCC--CCC
Q 000971 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS----SLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDN--HIG 239 (1206)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~----~~~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1206)
+|+|+|+.|++|++++|+|||||||||||++|+|.++| + +|+|.++|.++...... +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 99999999987654322 57999999974 557
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc---cccccc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV---CADTMV 316 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~v 316 (1206)
.+|+.|++.+.....+... .+....++.+++.+||++ ..+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPEEVLKK-- 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchHHHHhC--
Confidence 7899999987543211000 001223567899999973 3343
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
.+..|||||||||+||++++.+|+|++|||||+|||..+...+.+.|+++... .+++|+.++|..+++..++|+|+
T Consensus 122 ---~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 122 ---YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred ---ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 34579999999999999999999999999999999999999999999987653 34556667888889999999999
Q ss_pred EEcCCeEEEecChHHHH
Q 000971 397 LLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1206)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 390
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=321.19 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=169.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCC-CCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDN-HIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~-~~~ 239 (1206)
..+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 34999999999999999999999999999999999999987 9999999998865432 356999999865 467
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+||+||+.|.....+.. + .+....++.+++.+||.+..++.++
T Consensus 92 ~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 135 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP-P---------------------------------IEIRKRVDRALAEIGLEKYRHRSPK-- 135 (274)
T ss_pred cchHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHHHhcCCcc--
Confidence 789999999865432110 0 0112245678899999887776554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|+
T Consensus 136 ---~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 136 ---TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEE
Confidence 6999999999999999999999999999999999999999999998764 3 45555577777777 5699999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 391
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=319.09 Aligned_cols=209 Identities=25% Similarity=0.330 Sum_probs=164.2
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
+++|+++.++. .+..+|+|+||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 57788877641 113599999999999999999999999999999999998763 47999999976532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHH-----HHHHHHHHHc--CCccccccccCCCCCC
Q 000971 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRK-----MFIEEVMELV--ELKPLIQSLVGLPGVS 979 (1206)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~ 979 (1206)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567899999988776 6999999875321 1111111 1234444444 444444433 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. +|.|||+++|++. ++. .+|++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~~-~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TIE-NADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HHh-hCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999986 454 5999999986 68
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888764
No 392
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.6e-34 Score=318.62 Aligned_cols=207 Identities=24% Similarity=0.322 Sum_probs=170.7
Q ss_pred cceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--
Q 000971 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD-- 235 (1206)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d-- 235 (1206)
.+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 9999999998765432 34699999986
Q ss_pred CCCCCCCHHHHHHHHhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccc
Q 000971 236 NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCAD 313 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~d 313 (1206)
.+++.+||+||+.+..... ... ..+....++.+++.+||. ...+
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~ 145 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDAD 145 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh
Confidence 4667899999998754311 000 001122356788999996 5555
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000971 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1206)
Q Consensus 314 t~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1206)
..+ +.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.... +++|+.++|....+..++|
T Consensus 146 ~~~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d 219 (265)
T TIGR02769 146 KLP-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQ 219 (265)
T ss_pred CCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhc
Confidence 444 4799999999999999999999999999999999999999999999876533 4556667888889999999
Q ss_pred eEEEEcCCeEEEecChHHHH
Q 000971 394 DIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1206)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 220 RVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEEeCCEEEEECCHHHHc
Confidence 99999999999999998764
No 393
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=314.67 Aligned_cols=206 Identities=21% Similarity=0.294 Sum_probs=165.2
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC--CceeEEEECCeeCCCC--C---ccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1206)
.+|+|+|+.|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... . .++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999988621 1389999999887421 1 245799999998777
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCADT 314 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1206)
+ +||+||+.|+....+.... .+....++.+++.+||. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999986533211000 00112345567777773 33444
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
. ++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|...++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 3 45799999999999999999999999999999999999999999999874 24 5566678888888999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 394
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.2e-34 Score=355.88 Aligned_cols=212 Identities=28% Similarity=0.427 Sum_probs=179.4
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|.|+. +++.+|+|+|++++||+++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 123599999999999999999999999999999999998764 47999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccc------cccCCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ------SLVGLPG 977 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~------~~~g~~~ 977 (1206)
+.+ ..+++.++||+|++.+++ -|++||+.++. + +. .++.++++++.+++.+..+ +.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 346778999999998876 59999998753 1 12 2345889999999987643 445543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
...||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +|+|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999885 5899999999986 3467999999985
Q ss_pred cEEEEEcCC
Q 000971 1058 GQEIYVGPL 1066 (1206)
Q Consensus 1058 g~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 799999874
No 395
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=317.39 Aligned_cols=221 Identities=21% Similarity=0.288 Sum_probs=173.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1206)
.++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765432 2348999999999999
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++........ ....... .+..+ ....+....++.+++.+||.+..+..+
T Consensus 95 ~tv~enl~~~~~~~~~~~---~~~~~~~-------~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKTG---LFSGLLK-------TPAFR---------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccch---hhhhhcc-------ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 999999998643110000 0000000 00000 000011234567889999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++.+ ..+++|+.++|..+++.++||++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998765 3245666678888899999999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988653
No 396
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3e-34 Score=358.37 Aligned_cols=213 Identities=22% Similarity=0.321 Sum_probs=179.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++||+|.++. ..+.+|+|+|++|+||+++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999999852 124699999999999999999999999999999999998774 47999999988
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 976 (1206)
..+ ..+++.++||+|++.+++ -|++||+.++. +...+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 346778999999998886 69999998752 11122 3347888888887654 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|||+++|+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999874 4799999999985 5778999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799999984
No 397
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.6e-34 Score=316.13 Aligned_cols=206 Identities=21% Similarity=0.320 Sum_probs=171.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC----------------ccceE
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----------------PERTA 228 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~----------------~~~~~ 228 (1206)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 45999999999999999999999999999999999999987 999999999875431 13579
Q ss_pred EEecCCCCCCCCCCHHHHHHHHhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC
Q 000971 229 AYISQHDNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1206)
Q Consensus 229 ~yv~Q~d~~~~~lTV~Etl~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1206)
+|++|++.+++.+||.||+.++... .+... .+....++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMAR----------------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcC
Confidence 9999999899999999999885321 11000 001123566789999
Q ss_pred CcccccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchh
Q 000971 308 LEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPE 387 (1206)
Q Consensus 308 L~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~ 387 (1206)
|++..+..+ +.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++... .+++++.++|..++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 987666543 479999999999999999999999999999999999999999999987653 34566667888888
Q ss_pred HHhhcCeEEEEcCCeEEEecChHHHH
Q 000971 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 388 ~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1206)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999987663
No 398
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=316.11 Aligned_cols=217 Identities=22% Similarity=0.249 Sum_probs=176.1
Q ss_pred CcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC--C-eeEEEEEE
Q 000971 826 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITI 902 (1206)
Q Consensus 826 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i 902 (1206)
+..+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ + +.+|+|.+
T Consensus 14 ~~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~ 80 (265)
T PRK14252 14 QQKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIIL 80 (265)
T ss_pred CceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEE
Confidence 34589999998874 23699999999999999999999999999999999997643 1 25899999
Q ss_pred cCccCC-------cccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccc
Q 000971 903 SGYPKK-------QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQS 971 (1206)
Q Consensus 903 ~g~~~~-------~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~ 971 (1206)
+|.+.. ...+++.+||++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..+.
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 81 HPDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred cCccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 987642 12345678999999988875 99999987643221 1111223456788888888753 2233
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeE
Q 000971 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 972 ~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
. ...||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++
T Consensus 158 ~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i 230 (265)
T PRK14252 158 L-----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYT 230 (265)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEE
Confidence 3 357999999999999999999999999999999999999999999999865 699999999987 577899999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |+++..|+.
T Consensus 231 ~~l~~-G~i~~~g~~ 244 (265)
T PRK14252 231 AYMYM-GELIEFGAT 244 (265)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 789998874
No 399
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-34 Score=320.19 Aligned_cols=205 Identities=25% Similarity=0.349 Sum_probs=171.1
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1206)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999987 9999999998764322 246899999863 34568
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.+.....+... .+....++.+++.+||.+..++.+.
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVPH---- 136 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCcc----
Confidence 99999987653221100 0112245678999999887776654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|..+++.+.||+|++|++|
T Consensus 137 -~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 137 -HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 69999999999999999999999999999999999999999999988653 2455666788888999999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 400
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=316.90 Aligned_cols=205 Identities=20% Similarity=0.300 Sum_probs=165.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC--CceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1206)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987410 13899999999875321 13569999999877
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----cccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1206)
++ +||+||+.|+.+..+... .+....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK----------------------------------KDLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcchhhhhc
Confidence 87 899999998654322100 00112356678888884 3334
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000971 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1206)
Q Consensus 314 t~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1206)
+ .++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|..+++.+++|
T Consensus 150 ~-----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 S-----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998742 4 556667888888999999
Q ss_pred eEEEEcCCeEEEecChHHH
Q 000971 394 DIILLSDGQIVYQGPRELV 412 (1206)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~ 412 (1206)
+|++|++|++++.|+++++
T Consensus 222 ~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEEECCEEEEeCCHHHH
Confidence 9999999999999998876
No 401
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=320.25 Aligned_cols=205 Identities=25% Similarity=0.354 Sum_probs=169.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC----ccceEEEecCCCC-CCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHDN-HIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1206)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999886432 2467999999864 344
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
..||.|++.|+....+... .+....++++++.+||....++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 5799999998754222100 0112346778999999887777654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+.. +++|+.++|...++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 699999999999999999999999999999999999999999999886533 4445556777777765 99999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 402
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.35 Aligned_cols=217 Identities=18% Similarity=0.196 Sum_probs=171.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC-CceeEEEECCeeCCCCCcc-------ceEEEecCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVPE-------RTAAYISQHDN 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~nG~~~~~~~~~-------~~~~yv~Q~d~ 236 (1206)
..+|+|||+.|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.|+|.++.....+ +.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986421 2389999999988654431 36999999875
Q ss_pred --CCCCCCHHHHHHHHhhhcCC-CchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000971 237 --HIGEMTVRETLAFSARCQGV-GSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD 313 (1206)
Q Consensus 237 --~~~~lTV~Etl~f~~~~~~~-~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1206)
+.|.+||.+++.+....... +..+ .. ..+....+..+|+.+||.+..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67899999999864321100 0000 00 0011234567899999975321
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000971 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1206)
Q Consensus 314 t~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1206)
+-+..+..|||||||||+||+||+.+|++|++||||+|||+.+..++.+.|+++.+. .+.+|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCC
Confidence 113445689999999999999999999999999999999999999999999998653 35667778999999999999
Q ss_pred eEEEEcCCeEEEecChHHHH
Q 000971 394 DIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1206)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 403
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.37 Aligned_cols=204 Identities=22% Similarity=0.305 Sum_probs=167.8
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1206)
.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 9999999998765332 357999999974 68889
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||++|+.|.....+... .+....++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 99999988654221100 001123567889999987766554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++....+.| |+.++|...++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEECC
Confidence 4799999999999999999999999999999999999999999999876433444 5556666677765 9999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 404
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.7e-34 Score=306.20 Aligned_cols=194 Identities=24% Similarity=0.294 Sum_probs=161.8
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
.++|+++.++ .+.+|+||||.+++|+++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEccc
Confidence 5678877663 24699999999999999999999999999999999998653 47999999986532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
..+++.++|++|++.+++.+|+.||+.+....+. . + +..+.++++.++|.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2244678999999888888999999987643331 1 1 235788999999988777664 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEE
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1053 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~l 1053 (1206)
|++||++|+.+|++|+|||||+|||+.+...+++.|++++++|.|||+++|++. ++ .+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 999999999999999999999999999999999999998778999999999985 22 3466654
No 405
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8e-34 Score=310.72 Aligned_cols=196 Identities=24% Similarity=0.339 Sum_probs=164.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1206)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999987 9999999998765422 35799999998888
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 99999999998654321100 001123456788999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +++++.++|..+++...+|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998754 3 456666888888999999999999
Q ss_pred cCCeEE
Q 000971 399 SDGQIV 404 (1206)
Q Consensus 399 ~~G~iv 404 (1206)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999975
No 406
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.3e-34 Score=309.14 Aligned_cols=194 Identities=30% Similarity=0.444 Sum_probs=160.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999887 9999999998765422 357899999864 4678
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.++....+... .+....++.+++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988643221000 001123567888999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|..+++..+||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998765 3 45566678888899999999999999
Q ss_pred Ce
Q 000971 401 GQ 402 (1206)
Q Consensus 401 G~ 402 (1206)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 407
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=311.25 Aligned_cols=204 Identities=27% Similarity=0.411 Sum_probs=171.4
Q ss_pred EeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHH
Q 000971 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1206)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1206)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 9999999998865433 357999999999999999999
Q ss_pred HHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCC
Q 000971 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1206)
Q Consensus 246 tl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1206)
|+.++....+... .+....+..+++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221100 001123456788999987777655 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000971 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1206)
Q Consensus 326 GGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1206)
|||||||+||++++.+|++++|||||+|||..+...+.+.|++++...+. +++.++|..+++.+++|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~-tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGV-TVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987653344 55556777788899999999999999999
Q ss_pred ecChHHHH
Q 000971 406 QGPRELVL 413 (1206)
Q Consensus 406 ~G~~~~~~ 413 (1206)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 408
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-34 Score=285.20 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=177.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
..+|+|||+.|.+|+.++++||||||||||||+++|..+|. .|+|.+||.+++.- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999997 99999999988753 33458999999999999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.|+.++.|.... +...++...+...||+...+. ++-.|
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~~-----~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEHK-----YIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCccccccc-----ceEee
Confidence 999999998886432 122356778899999987664 45579
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1206)
||||||||.|||||+.+|+.|+||||+.+||.-++.++.+.|-++.+..+ ..+..++|..+|..-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999998888776554 445558999999999999999998 479
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
|+..-|++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998877664433
No 409
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=317.85 Aligned_cols=204 Identities=27% Similarity=0.380 Sum_probs=169.3
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC-CCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN-HIG 239 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~-~~~ 239 (1206)
.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 999999999874211 1357999999863 344
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+||+||+.|+....+.. + .+....+..+++.+||.+..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 579999998753221100 0 0111235678899999887776654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.||||||||++||++++.+|++++|||||+|||+.+...+.+.|+++.+ . +++|+.++|..+++.++||+|++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 6999999999999999999999999999999999999999999998864 3 4556668888889999999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998764
No 410
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.2e-34 Score=318.70 Aligned_cols=211 Identities=28% Similarity=0.404 Sum_probs=163.2
Q ss_pred EEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 000971 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1206)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1206)
+++|+++.++.. +++.+|+|+||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhh
Confidence 577888776310 123599999999999999999999999999999999998653 47999999976532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-C-----CCCCCC
Q 000971 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGVSG 980 (1206)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~~~ 980 (1206)
...++.++|++|++.+++ .||+|++.+....+ ..+ .+.+.++..++.+..+.+. | ...+..
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 139 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVGERGSQ 139 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeeccCCcc
Confidence 223456999999988776 69999998753211 111 1233344444433222211 0 112467
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEE
Q 000971 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1206)
Q Consensus 981 LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~ 1060 (1206)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.||++++|++ |++
T Consensus 140 LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i 215 (238)
T cd03249 140 LSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQV 215 (238)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999986 7999999999986 45 47999999986 688
Q ss_pred EEEcCC
Q 000971 1061 IYVGPL 1066 (1206)
Q Consensus 1061 ~~~g~~ 1066 (1206)
++.|+.
T Consensus 216 ~~~~~~ 221 (238)
T cd03249 216 VEQGTH 221 (238)
T ss_pred EEeCCH
Confidence 888874
No 411
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=319.36 Aligned_cols=205 Identities=22% Similarity=0.320 Sum_probs=166.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCC-
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~- 236 (1206)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999987 999999999876432 1356999999862
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1206)
.+...||+||+.|.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334799999988643221100 011123567788899963 44544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000971 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1206)
Q Consensus 316 vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1206)
++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|...++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 447999999999999999999999999999999999999999999998764 3 455666778888888999999
Q ss_pred EEEcCCeEEEecChHHHH
Q 000971 396 ILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1206)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 412
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-33 Score=309.94 Aligned_cols=210 Identities=23% Similarity=0.277 Sum_probs=167.7
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEc--Cc-
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS--GY- 905 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~- 905 (1206)
+.++|+++.++.... ...++.+|+|+||+|++||+++|+||||||||||+++|+|...+ ..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 568889887742100 00124699999999999999999999999999999999998663 47999998 42
Q ss_pred -cCCc---cc----ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCC
Q 000971 906 -PKKQ---ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLP 976 (1206)
Q Consensus 906 -~~~~---~~----~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~ 976 (1206)
+... .. .++.+||++|++.+++.+||.|++.+..... ....+...+.+.++++.++|.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 11 1346899999998999999999998754322 12333445568899999999763 3444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4579999999999999999999999999999999999999999999999877999999999975 4567899998764
No 413
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=310.18 Aligned_cols=206 Identities=27% Similarity=0.341 Sum_probs=172.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+.++||++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999987 9999999998865432 4579999999988999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
+||+.++....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999988654322100 001123567889999987777655 47
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++....+. +|+.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~-tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGI-TFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653344 455567777888999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887653
No 414
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-34 Score=308.24 Aligned_cols=195 Identities=25% Similarity=0.368 Sum_probs=163.5
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~Etl~ 248 (1206)
|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999998765432 357999999999999999999998
Q ss_pred HHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhh
Q 000971 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1206)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1206)
++........ .+....++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLKLT----------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccCcc----------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7532110000 001223567899999987777655 4799999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000971 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1206)
Q Consensus 329 kkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1206)
||||+||++++.+|++++|||||+|||..+...+.+.|++++... +.+|+.++|...++.++||+|++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999876533 455556888888999999999999999998764
No 415
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=316.23 Aligned_cols=211 Identities=25% Similarity=0.379 Sum_probs=167.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++. .+.+|+|+||++++|++++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 4788999987631 13599999999999999999999999999999999998763 479999999765
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-C-----CCCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGV 978 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~ 978 (1206)
.. ..+++.++|++|++.+++. |++||+.+... ... ...+.+.++.+++.+..+.+. | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999887775 99999976421 111 123455566666654443321 1 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||+|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999985 5899999999986 34 56999999985 7
Q ss_pred EEEEEcCC
Q 000971 1059 QEIYVGPL 1066 (1206)
Q Consensus 1059 ~~~~~g~~ 1066 (1206)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887763
No 416
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=313.65 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=166.4
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1206)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999987 9999999998764332 357999999987776 69
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccCccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGDEMI 321 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1206)
|+||+.+.....+ . ....++.+++.+||+ +..+. .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 001245678889996 44444 34
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
..|||||||||+||+|++.+|++++|||||+|||..+...+.+.|+++....+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999998765334 45666788888899999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 417
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=314.24 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=169.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCCc---cceEEEecCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++..... ++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 1138999999998764332 357999999988899
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCc
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1206)
.+||+||+.++.+....... ..+....+..+++.+||.+..... -+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~ 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LDA 142 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcC
Confidence 99999999986543211000 001122356688889986421111 123
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000971 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1206)
Q Consensus 320 ~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1206)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|..+++.+.+|+|++|+
T Consensus 143 ~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~ 219 (250)
T PRK14247 143 PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLY 219 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEE
Confidence 345799999999999999999999999999999999999999999999874 24 556667788888889999999999
Q ss_pred CCeEEEecChHHHH
Q 000971 400 DGQIVYQGPRELVL 413 (1206)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1206)
+|++++.|+++++.
T Consensus 220 ~G~i~~~g~~~~~~ 233 (250)
T PRK14247 220 KGQIVEWGPTREVF 233 (250)
T ss_pred CCeEEEECCHHHHH
Confidence 99999999988763
No 418
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-34 Score=300.79 Aligned_cols=171 Identities=29% Similarity=0.420 Sum_probs=150.1
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ ++.+|+++||++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (178)
T cd03229 1 LELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLT 65 (178)
T ss_pred CEEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35788887763 24699999999999999999999999999999999998663 4899999998653
Q ss_pred c-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 000971 909 Q-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1206)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 983 (1206)
. ..+++.++|++|++.+++..|++|++.+. ||+
T Consensus 66 ~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~ 103 (178)
T cd03229 66 DLEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSG 103 (178)
T ss_pred ccchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCH
Confidence 2 23456799999999888889999987542 899
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 984 Gqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++|
T Consensus 104 G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 104 GQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999887 899999999986 566789999999864
No 419
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.3e-33 Score=309.38 Aligned_cols=197 Identities=23% Similarity=0.315 Sum_probs=166.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1206)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999887 999999998875422 25799999999889999999
Q ss_pred HHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccC
Q 000971 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1206)
Q Consensus 245 Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1206)
||+.+.....+.. ...+..+++.+||++..+..+ ..|
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 9998764322100 012456788999987766554 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000971 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1206)
Q Consensus 325 SGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv 404 (1206)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+. +|+.++|...++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~-tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGI-TVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998754 344 4555677778888999999999999999
Q ss_pred EecChH
Q 000971 405 YQGPRE 410 (1206)
Q Consensus 405 ~~G~~~ 410 (1206)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999865
No 420
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=317.43 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCC--CC---ccceEEEecCCCC-CC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--FV---PERTAAYISQHDN-HI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .. .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 9999999998742 11 1356999999864 34
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+..|+.||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 56689999988643221100 001123567889999987776654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. .+ ++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998764 34 45666788888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 421
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.9e-32 Score=347.82 Aligned_cols=212 Identities=27% Similarity=0.422 Sum_probs=177.9
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|.|+. +.+.+|+|+|+.++||+.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 46999999999851 123599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.+|||+|++.+++ .|++||+.++. + +.+ ++.+.++++..++.+.. |+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 356778999999988876 69999997642 1 222 33467788888876543 4455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .|+|+|+++|+++ ....||++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999884 5899999999986 3567999999986
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999984
No 422
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=315.66 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=169.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC----------------CccceE
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----------------VPERTA 228 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~----------------~~~~~~ 228 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++++ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 45999999999999999999999999999999999999887 99999999887431 113579
Q ss_pred EEecCCCCCCCCCCHHHHHHHHhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC
Q 000971 229 AYISQHDNHIGEMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1206)
Q Consensus 229 ~yv~Q~d~~~~~lTV~Etl~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1206)
+|++|++.+++.+||+||+.++.. ..... ..+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999999999999999987532 11100 0011223567889999
Q ss_pred Ccccc-cccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCch
Q 000971 308 LEVCA-DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAP 386 (1206)
Q Consensus 308 L~~~~-dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~ 386 (1206)
|.+.. +. .++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 97653 43 3457999999999999999999999999999999999999999999998764 3 455566788888
Q ss_pred hHHhhcCeEEEEcCCeEEEecChHHHH
Q 000971 387 ETYDLFDDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 387 ~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1206)
++..+||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 898999999999999999999988763
No 423
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=311.39 Aligned_cols=194 Identities=20% Similarity=0.292 Sum_probs=165.7
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
..+.+|++||++|+||+++||+||||||||||+++|+|...+ .+|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 446799999999999999999999999999999999998763 4799999984 3567777767778999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
.||+.+..... ....++....++++++.++|.+..+..+ ..||+|||||++||++|+.+|+||+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 1234444556788999999988777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1012 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|+.+...+++.|+++.+.|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999998777999999999986 57788999999985 7899888854
No 424
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=328.24 Aligned_cols=228 Identities=25% Similarity=0.359 Sum_probs=194.2
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
-++.+|++.++. ..++|+||||++++||++||||.||||||||+|+|+|-..+ .+|+|.+||.+.
T Consensus 8 ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p--~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPP--DSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccC--CCceEEECCEEc
Confidence 477888887663 46799999999999999999999999999999999998764 489999999876
Q ss_pred Cc----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcC-CCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 908 KQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 908 ~~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
.. .....-++.|.|+..+.|++||.||+.++...+. ..-++.+...+...++|+.+++....++++ ..||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCC
Confidence 42 2234568999999999999999999988765544 234667777888999999999964466765 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
.||||.|.|||||..+++|||||||||.|+......+.+.++++.++|.+||++||... ++++.|||+.+|.+ |+.+.
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999997 89999999999986 78888
Q ss_pred EcCC-Cc-chhHHHHHH
Q 000971 1063 VGPL-GR-HSCQLISYF 1077 (1206)
Q Consensus 1063 ~g~~-~~-~~~~~~~yf 1077 (1206)
.++. ++ .-.+++...
T Consensus 226 ~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 226 TRPTAAETSEDELVRLM 242 (500)
T ss_pred ecccccCCCHHHHHHHh
Confidence 8883 33 233455443
No 425
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.1e-34 Score=362.06 Aligned_cols=205 Identities=27% Similarity=0.379 Sum_probs=165.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
.++|+|+|++|+||+.++|+||||||||||+|+|+|.++|+ +|+|.+||+++.+..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 45899999999999999999999999999999999999998 9999999999988765 468999999987775 5
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++.. . + .+...+ ++...+ .+.. +-.|++..||.+|+.+
T Consensus 542 TI~eNi~~~~~-~---~-~e~i~~---------------------al~~a~------l~~~--i~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---T-LDEAWE---------------------AARMAG------LAED--IRAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC-C---C-HHHHHH---------------------HHHHcC------cHHH--HHhccccccccccCCC-
Confidence 99999998632 0 0 011111 110000 0111 1235667899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.+||||||||++||||++.+|+|++||||||+||+.+..++.+.|+++ ++|+|+ ++|.. +....+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999874 356555 45544 456779999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 426
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.6e-34 Score=365.95 Aligned_cols=211 Identities=25% Similarity=0.377 Sum_probs=177.8
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|+|+. ++.+|+|+|++|+||+.+||+||||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 36999999999851 23599999999999999999999999999999999998774 48999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.+|||+|++.+++ -|++||+.++.. .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 456788999999998886 599999987521 1222 23477888888876543 4556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4899999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999984
No 427
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.6e-33 Score=309.71 Aligned_cols=198 Identities=28% Similarity=0.351 Sum_probs=162.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999987 9999999998865432 2469999999989
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||.||+.+.....+... .+....++.+++.+||.+..+..+.
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCChh
Confidence 999999999988643221100 0112235678899999877666554
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++...+.| |+.++|+.+++ +.+|++++
T Consensus 146 -----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 -----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTT-LILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEE
Confidence 699999999999999999999999999999999999999999999886533444 55566666666 55999999
Q ss_pred EcCCeEEEe
Q 000971 398 LSDGQIVYQ 406 (1206)
Q Consensus 398 L~~G~iv~~ 406 (1206)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 428
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=318.60 Aligned_cols=208 Identities=24% Similarity=0.329 Sum_probs=169.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1206)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 358999999999999999999999999999999999998862223999999998865332 357999999964 6778
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
+||+||+.|..+..+.. ..+....++.+++.+||.+..++.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~---- 141 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEP---- 141 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc----
Confidence 99999998864322110 0011234567889999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|++++...+ ++|+.++|..+++ ..||++++|++
T Consensus 142 -~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 142 -ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNN-LTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEEC
Confidence 57999999999999999999999999999999999999999999998865334 4455566666676 57999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998764
No 429
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-35 Score=293.38 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=178.6
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCC
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPF 928 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~ 928 (1206)
+.+.+|++||..|++|.+|+|+|||||||||||.++++... ..+|+|.++|.++.. ...++.+..+-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 35789999999999999999999999999999999998665 348999999998643 3356667788888888888
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPT 1008 (1206)
+||+|-+.|+..-.. .....++.+..++++++.++|.++.|+.. ..||||||||.-||+.|+.+.+.++||||.
T Consensus 90 lTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 999999999743222 22234556778999999999999999984 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1009 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
++||...+..+|+.||+++++ |+|||++.||.+. ...+.|+|+-|++ |+++..|++.
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 999999999999999999977 9999999999874 4567899999985 7999999975
No 430
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-33 Score=312.89 Aligned_cols=213 Identities=24% Similarity=0.321 Sum_probs=168.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCC--CCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l--~~~~~~~G~I~~nG~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 565 9999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccccc
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVG 317 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg 317 (1206)
+.+|++|++.+.......... .... ...+....++.+++.+||+ ...+..++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999886432110000 0000 0001123457789999997 35554443
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh-cCeEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL-FDDII 396 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~-fD~vi 396 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|..+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999998754 34 4555577777888887 89999
Q ss_pred EEcCCeEEEecChHHHH
Q 000971 397 LLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1206)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 431
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.20 Aligned_cols=221 Identities=23% Similarity=0.293 Sum_probs=175.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCC---CeeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 904 (1206)
.+.++||++.+. .+.+|+++||+|++|++++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999998874 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000971 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EVD-SETRKMFIEEVMELVELKPLI 969 (1206)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 969 (1206)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 123567999999988777 59999998864321100 011 123356688999999885322
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcC
Q 000971 970 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1049 (1206)
Q Consensus 970 ~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d 1049 (1206)
...... .+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLDD-NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhcC-ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 222111 2467999999999999999999999999999999999999999999999876 589999999987 5778899
Q ss_pred eEE-EEecCcEEEEEcCC
Q 000971 1050 ELF-LMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1050 ~v~-ll~~gg~~~~~g~~ 1066 (1206)
+++ +|++ |++++.|+.
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 975 5664 799999875
No 432
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=313.58 Aligned_cols=204 Identities=24% Similarity=0.320 Sum_probs=168.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCC------C---CccceEEEecCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE------F---VPERTAAYISQHD 235 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~------~---~~~~~~~yv~Q~d 235 (1206)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999887 9999999987631 1 1135699999999
Q ss_pred CCCCCCCHHHHHHHHh-hhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000971 236 NHIGEMTVRETLAFSA-RCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1206)
Q Consensus 236 ~~~~~lTV~Etl~f~~-~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1206)
.+++.+||+||+.+.. ...+... .+....++.+++.+||++..+.
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhC
Confidence 9999999999997532 1111000 0011235678899999876665
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.+ +.|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.. . +++++.++|+..++.+++|+
T Consensus 138 ~~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~ 210 (242)
T PRK11124 138 FP-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASR 210 (242)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCE
Confidence 54 47999999999999999999999999999999999999999999998753 3 45566677888888899999
Q ss_pred EEEEcCCeEEEecChHHH
Q 000971 395 IILLSDGQIVYQGPRELV 412 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~ 412 (1206)
+++|.+|++++.|+++++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999988754
No 433
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.9e-33 Score=303.62 Aligned_cols=202 Identities=19% Similarity=0.308 Sum_probs=153.3
Q ss_pred CCcEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcC
Q 000971 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1206)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 904 (1206)
.|..+-.+||+|.|+ +.++++++++|-|.--..+||+||||.||||||++|.|..++. .|+..-|.
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~--~GE~RKnh 648 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPN--DGELRKNH 648 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCC--cchhhccc
Confidence 345678899998875 3467999999999999999999999999999999999987743 56554332
Q ss_pred ccCCcccccceEEEeecCC--CCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 000971 905 YPKKQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 905 ~~~~~~~~~~~~gyv~q~~--~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 982 (1206)
+-.+|+.-|.. .+...-|.-|.|.-. . .++.+ .....|-.+||...++++- +..||
T Consensus 649 --------rL~iG~FdQh~~E~L~~Eetp~EyLqr~--F----Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 649 --------RLRIGWFDQHANEALNGEETPVEYLQRK--F----NLPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred --------eeeeechhhhhHHhhccccCHHHHHHHh--c----CCChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 23478877753 234455777766421 1 12222 2456788999998888763 56899
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~ 1062 (1206)
||||-||++|---+..|+||||||||++||..+...+-+.|++. ...||+++|+-.. |.+--..+.++.+.|.--.
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999998876 4589999999764 5555567777766554444
Q ss_pred EcCC
Q 000971 1063 VGPL 1066 (1206)
Q Consensus 1063 ~g~~ 1066 (1206)
.|..
T Consensus 783 dGdF 786 (807)
T KOG0066|consen 783 DGDF 786 (807)
T ss_pred cccH
Confidence 4554
No 434
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.5e-33 Score=346.49 Aligned_cols=215 Identities=23% Similarity=0.277 Sum_probs=175.9
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcC----
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG---- 904 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g---- 904 (1206)
++++|+++.+. ++.+|+||||++.+|+++||+|||||||||||++|+|.....+.+|+|.++|
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~ 67 (520)
T TIGR03269 1 IEVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCE 67 (520)
T ss_pred CEEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccc
Confidence 35788888763 2469999999999999999999999999999999999741013479999872
Q ss_pred -------------------ccC----------Cc---ccccceEEEeecC-CCCCCCCCHHHHHHHhhhhcCCCCCCHHH
Q 000971 905 -------------------YPK----------KQ---ETFARISGYCEQN-DIHSPFVTVYESLLYSAWLRLPPEVDSET 951 (1206)
Q Consensus 905 -------------------~~~----------~~---~~~~~~~gyv~q~-~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~ 951 (1206)
.++ .. ..+++.+||++|+ +.+++.+||+|++.|..... ....++
T Consensus 68 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~ 144 (520)
T TIGR03269 68 KCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKE 144 (520)
T ss_pred cccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 111 00 1134568999997 67788899999998864332 123344
Q ss_pred HHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC
Q 000971 952 RKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1030 (1206)
Q Consensus 952 ~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g 1030 (1206)
.++++.++++.++|.+..++.+ ..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|
T Consensus 145 ~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g 219 (520)
T TIGR03269 145 AVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG 219 (520)
T ss_pred HHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 5567899999999988777763 57999999999999999999999999999999999999999999999865 49
Q ss_pred CEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 1031 RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1031 ~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
.|||+++|++. .+.+.||++++|++ |++++.|+.
T Consensus 220 ~tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 220 ISMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred cEEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 99999999987 46788999999986 688888875
No 435
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-33 Score=313.79 Aligned_cols=198 Identities=24% Similarity=0.319 Sum_probs=167.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++||++.++ ++.+|+++||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCc--
Confidence 478999998874 23599999999999999999999999999999999998663 4799999872
Q ss_pred CcccccceEEEeecCCCCCCC--CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 908 KQETFARISGYCEQNDIHSPF--VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~--~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
..++|++|++.+++. .|+.+++.+.. ... ++.+.++++.++|.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~~------~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLRP------GTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhccc------ccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877665 47788765321 111 234788999999998877763 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|||++||++|+.+|++|+|||||+|||+.+...+++.|+++.++ |+|||+++|+++ ++.+.+|++++|+ + ++++.|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999987 5778899999995 4 688888
Q ss_pred CC
Q 000971 1065 PL 1066 (1206)
Q Consensus 1065 ~~ 1066 (1206)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 436
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=316.92 Aligned_cols=209 Identities=23% Similarity=0.384 Sum_probs=171.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 45999999999999999999999999999999999999987 9999999998765432 24699999999889999
Q ss_pred CHHHHHHHHhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 242 TVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 242 TV~Etl~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
||+||+.++..-. ...... . ......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~~~~~~~------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRW------------------R-------------KEDEEAVTKAMQATGITHLADQSV---- 141 (265)
T ss_pred cHHHHHHhCcccccccccCC------------------C-------------HHHHHHHHHHHHHcCCHHHhcCCc----
Confidence 9999998752100 000000 0 001123567889999987666554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|...++.+++|+|++|++
T Consensus 142 -~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 142 -DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred -ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4799999999999999999999999999999999999999999999876533 45566677888899999999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|++++.|+++++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 437
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=309.78 Aligned_cols=201 Identities=23% Similarity=0.400 Sum_probs=168.4
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~Etl~ 248 (1206)
|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998765432 357999999999999999999998
Q ss_pred HHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhh
Q 000971 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1206)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1206)
+.... .... . ......++.+++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKL--N-------------------------------AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccCC--C-------------------------------HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 0000 0 0011235678899999887776654 699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000971 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1206)
Q Consensus 329 kkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1206)
||||+||++++.+|++++|||||+|||..++..+.+.|+++.+..+ ++|+.++|...++.+++|+|++|.+|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998765334 455557788888899999999999999999999
Q ss_pred hHHHH
Q 000971 409 RELVL 413 (1206)
Q Consensus 409 ~~~~~ 413 (1206)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 438
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=322.69 Aligned_cols=211 Identities=19% Similarity=0.277 Sum_probs=169.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 02389999999998632 224679999999887
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++ .||+||+.|+....+... . +..+..+..+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIND-R--------------------------------KILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCCh-H--------------------------------HHHHHHHHHHHHHcCCcchhhhhhh
Confidence 74 799999998643321100 0 0011124456777777654455665
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
. ....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .+|+.++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4558999999999999999999999999999999999999999999998753 3 5566688888888999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 439
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=316.41 Aligned_cols=210 Identities=24% Similarity=0.339 Sum_probs=171.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|+..+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999887 9999999998754332 35699999998888999
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||.||+.++..... .... . + . ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~--~~~~-------------~-~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH--GALG-------------R-F-G-------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc--cccc-------------C-C-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 0000 0 0 0 0011235678899999876666654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.|||||||||+||++|+.+|+|++|||||+|||..+...+.+.|++++... +++|+.++|..+++.+++|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999876533 455666778888999999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987653
No 440
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1e-33 Score=307.96 Aligned_cols=200 Identities=26% Similarity=0.410 Sum_probs=160.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCC--CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHI--GEMT 242 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1206)
.++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++. ..++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999987 999999998764 2345799999987653 3489
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.++...... .+.. + . .+....++.+++.+||++..++.++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~--~------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------L--S------------KADKAKVDEALERVGLSELADRQIG----- 131 (213)
T ss_pred HHHHHHhccccccc--cccC--------------C--C------------HHHHHHHHHHHHHcCCHHHHhCCcc-----
Confidence 99999885431100 0000 0 0 0012235678899999876666554
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ . +++|+.++|..+++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999865 3 455666788888999999999999886
Q ss_pred EEEec
Q 000971 403 IVYQG 407 (1206)
Q Consensus 403 iv~~G 407 (1206)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 441
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2e-32 Score=304.97 Aligned_cols=173 Identities=24% Similarity=0.306 Sum_probs=136.5
Q ss_pred eecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHH
Q 000971 857 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 936 (1206)
Q Consensus 857 L~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~ 936 (1206)
|.==.+.|..||+++++||||-||||+.++|+|...+. +|+ .. .-.++|=||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 44446788999999999999999999999999977643 554 11 123677788655456789999775
Q ss_pred HhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000971 937 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1016 (1206)
Q Consensus 937 ~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~ 1016 (1206)
-...-+... ..+..|+++-++|.++.++.+ .+|||||.|||+||.+|.++++|.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123568899999999999885 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 1017 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 1017 ~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
..+-+.||+...+ +.|.+++-||.-+ +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 8999999999753 444678888775
No 442
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-33 Score=314.02 Aligned_cols=205 Identities=21% Similarity=0.291 Sum_probs=168.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1206)
..+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 9999999998764322 357999999964 6778
Q ss_pred CCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcc
Q 000971 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1206)
Q Consensus 241 lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1206)
.||.||+.++....+.. + .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998864321110 0 001123567888999987766554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000971 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1206)
Q Consensus 321 ~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1206)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++....+ ++|+.++|..+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQ-LTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 47999999999999999999999999999999999999999999998765324 45555777777775 6999999999
Q ss_pred CeEEEecChHHHH
Q 000971 401 GQIVYQGPRELVL 413 (1206)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1206)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 443
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.1e-33 Score=315.61 Aligned_cols=207 Identities=20% Similarity=0.247 Sum_probs=169.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC--CCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN--HIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999998753222 246999999864 578
Q ss_pred CCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccC
Q 000971 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGD 318 (1206)
Q Consensus 240 ~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1206)
.+||.|++.+..+....... .+....++.+++.+||. +..+..+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999886542210000 01112356789999994 5555443
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++|+.+|+|++|||||+|||+.+...+.+.|+++.+.. +++|+.++|..+++..+||+|++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4799999999999999999999999999999999999999999999986533 455666788888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 444
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3e-33 Score=309.11 Aligned_cols=206 Identities=26% Similarity=0.408 Sum_probs=171.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1206)
+++|+|+|+++.+|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999887 9999999998765433 3579999999988999999
Q ss_pred HHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccccc
Q 000971 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1206)
Q Consensus 244 ~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1206)
.||+.+.....+... ......++.+++.++|....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999988654321100 001123466788899977666554 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000971 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1206)
Q Consensus 324 LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1206)
||||||||++||++++.+|++++|||||+|||..+...+.+.|++++. ..+.+|+.++|...++.+++|+|++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3234455566777888999999999999999
Q ss_pred EEecChHHHH
Q 000971 404 VYQGPRELVL 413 (1206)
Q Consensus 404 v~~G~~~~~~ 413 (1206)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 445
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-33 Score=303.44 Aligned_cols=194 Identities=24% Similarity=0.316 Sum_probs=163.5
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
+.++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNP--EKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeeEEECCCccc
Confidence 56788888763 24699999999999999999999999999999999998764 4799999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ..+++.++|++|+..+++..||+||+.+.... . .. ...++++++.+++.+..+..+ ..||+|||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 23456799999998888899999999876421 1 11 235789999999987666653 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEE
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF 1052 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ 1052 (1206)
||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ....+|..+
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999976 345677654
No 446
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=312.67 Aligned_cols=210 Identities=22% Similarity=0.320 Sum_probs=165.1
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCCC-----ccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1206)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ +....+|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 10013899999999875321 135799999998888
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+ .||+||+.|+....+.... .+....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999987543221000 001123456778888854222222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 24 45666778888899999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987663
No 447
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.2e-33 Score=345.68 Aligned_cols=221 Identities=19% Similarity=0.262 Sum_probs=179.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC---eeEEEEEEcC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 904 (1206)
.+.++|+++.++.. ...+.+|+||||+|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 37889999887411 01246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCcc------cc-cceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccc
Q 000971 905 YPKKQE------TF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL---IQSL 972 (1206)
Q Consensus 905 ~~~~~~------~~-~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~ 972 (1206)
.++... .. ++.+||++|++. +.+.+|+.|++.+...... ..+..+.+++++++++.++|.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHR--GMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 875321 11 246899999974 5677899999876432211 23344556778999999999763 4555
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeE
Q 000971 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1206)
Q Consensus 973 ~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v 1051 (1206)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+++.|++++++ |.|||+++|++. .+...+|++
T Consensus 154 -----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 -----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred -----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999999765 899999999987 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000971 1052 FLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 1052 ~ll~~gg~~~~~g~~ 1066 (1206)
++|++ |++++.|+.
T Consensus 228 ~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 228 AVMQN-GRCVEQNRA 241 (529)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 789888875
No 448
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.4e-32 Score=335.87 Aligned_cols=213 Identities=24% Similarity=0.361 Sum_probs=178.1
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++||+|+++. .++.+|+|+|+.+++|++++|+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEe
Confidence 36999999999852 123599999999999999999999999999999999998774 47999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
.++ ..+++.++||+|++.+++ -|++|||.++. +.+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 543 345678999999998775 59999998652 11222 33578889999887644 4445544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
...||||||||++|||+|+++|+||+||||||+||+.+++.+++.|+++. .++|||++||+++ ....||+|++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999875 4799999999985 5788999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 543 -g~i~~~g~~ 551 (571)
T TIGR02203 543 -GRIVERGTH 551 (571)
T ss_pred -CEEEeeCCH
Confidence 788888874
No 449
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-34 Score=327.60 Aligned_cols=212 Identities=23% Similarity=0.359 Sum_probs=179.6
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++||+|+|+.+ ..++|+|+||++++||.+||+|+||||||||+.+|+|-..+ .+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~--~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDP--QQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCC--CCCeeeECCcCh
Confidence 78999999999743 24699999999999999999999999999999999997663 489999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------cCCCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-------VGLPG 977 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------~g~~~ 977 (1206)
.. ...++.+++++|...++. -|+++||.+.. .+. .++.++++++++||.+..... +|+.
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~A----sDEel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDA----SDEELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCC----CHHHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 335667899999877664 69999998752 122 344589999999998765444 5544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
+..||||||||++|||+|++|.++++|||||.|||+.+++.|++.|.+-++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999988654 899999999975 4688999999985
Q ss_pred cEEEEEcCCC
Q 000971 1058 GQEIYVGPLG 1067 (1206)
Q Consensus 1058 g~~~~~g~~~ 1067 (1206)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 7999999853
No 450
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=313.17 Aligned_cols=213 Identities=21% Similarity=0.309 Sum_probs=168.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCC--CCC---ccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMG--EFV---PERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~--~~~---~~~~~~yv~Q~d~~ 237 (1206)
.++|+|+|+.|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++. ... .++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35899999999999999999999999999999999998762 123899999999875 221 23579999999999
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||.||+.++....+..... .+....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDRL- 143 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhhh-
Confidence 99999999999865322110000 001123456778888743111111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ + .+|+.++|..+++..++|+|++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~ 220 (253)
T PRK14267 144 NDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAF 220 (253)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998753 3 4566678888889999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 221 LYLGKLIEVGPTRKVF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 451
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.4e-34 Score=360.99 Aligned_cols=211 Identities=27% Similarity=0.410 Sum_probs=175.6
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|+|+.. +++.+|+|+|++|+|||++||+||||||||||+++|+|...+ .+|+|.+||.+
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998621 124699999999999999999999999999999999998774 47999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.+ ..+++.++||+|++.++. .|++||+.++. + +.+ ++.++++++..++.+.. |+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 654 446778999999998876 69999998752 1 222 34578889998887654 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
..+||||||||++|||||+++|+||+||||||+||+.++..|++ .. ...++|||+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999998 22 235899999999985 4678999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 799999984
No 452
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=311.02 Aligned_cols=211 Identities=20% Similarity=0.288 Sum_probs=167.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1206)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 123899999999875321 14579999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++ .||+||+.++.+..+.... .+....+..+++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 87 6999999986432211000 011223556788888864332222
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+..++.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|..+++.++||+|++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEE
Confidence 24556899999999999999999999999999999999999999999999874 24 4566677888889999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+++++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 453
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=316.24 Aligned_cols=216 Identities=23% Similarity=0.315 Sum_probs=172.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC--------ccceEEEecCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--------PERTAAYISQHDN 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~--------~~~~~~yv~Q~d~ 236 (1206)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45999999999999999999999999999999999999875223699999998875321 1346899999998
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
+++.+||+||+.+...... ... ... ... . ..+....++.+++.+||++..+..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~~~------~~~---~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--PFW------RTC---FSW-F--------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--cch------hhh---ccc-c--------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 9999999999987542100 000 000 000 0 0011234577899999987777655
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+ .|||||||||+||+||+.+|++++|||||+|||..+...+.+.|+++++.. +++|+.++|+.+++..++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 699999999999999999999999999999999999999999999986533 4566667888888999999999
Q ss_pred EEcCCeEEEecChHHH
Q 000971 397 LLSDGQIVYQGPRELV 412 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~ 412 (1206)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 454
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=320.17 Aligned_cols=206 Identities=19% Similarity=0.296 Sum_probs=166.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCC----C----CccceEEEecCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE----F----VPERTAAYISQHDN 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~----~----~~~~~~~yv~Q~d~ 236 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35999999999999999999999999999999999999887 9999999988742 1 11357999999863
Q ss_pred -CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000971 237 -HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1206)
Q Consensus 237 -~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1206)
.+...||+||+.|+....+... .+....++.+++.+||. +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcC
Confidence 2334699999998643221100 00112346678899994 45554
Q ss_pred cccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000971 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1206)
Q Consensus 315 ~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1206)
.+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.++||+
T Consensus 147 ~~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~ 220 (289)
T PRK13645 147 SP-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADE 220 (289)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCE
Confidence 44 4799999999999999999999999999999999999999999999886533 45566678888889999999
Q ss_pred EEEEcCCeEEEecChHHHH
Q 000971 395 IILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1206)
|++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 455
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=328.90 Aligned_cols=208 Identities=19% Similarity=0.281 Sum_probs=172.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.+... ..+.+|+||||.|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~----------~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDG----------EYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCCC----------ccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee
Confidence 47788888776421 124699999999999999999999999999999999998764 479999999641
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
++.+...+.+.+|++|++.+..... ..+.++..+.+.++++.++|.+..++.+ ..|||||||
T Consensus 89 ----------~i~~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQ 150 (549)
T PRK13545 89 ----------LIAISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKS 150 (549)
T ss_pred ----------eEEeccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHH
Confidence 1222334566789999998754332 1233444566888999999988877764 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|++|||||+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ .+...||++++|.+ |++++.|+..
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999998877999999999987 57788999999985 7899999864
No 456
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-33 Score=298.86 Aligned_cols=159 Identities=25% Similarity=0.440 Sum_probs=141.5
Q ss_pred EeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCC
Q 000971 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPF 928 (1206)
Q Consensus 856 vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~ 928 (1206)
+|+++|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 79999999999999999999999999999999998764 479999999876432 2356799999984 57788
Q ss_pred CCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000971 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1206)
Q Consensus 929 ~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPT 1008 (1206)
+|++||+.+... ||+|||||++||+||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976421 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 1009 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 999999999999999998777999999999986 678889999999864
No 457
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-33 Score=309.44 Aligned_cols=210 Identities=23% Similarity=0.326 Sum_probs=168.8
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.++++|+++.++. ..+.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 68 (221)
T cd03244 2 DIEFKNVSLRYRP-----------NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVEL--SSGSILIDGVDI 68 (221)
T ss_pred cEEEEEEEEecCC-----------CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCCEEEECCEEh
Confidence 4788999987741 123599999999999999999999999999999999997653 479999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-cC-----CCCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-VG-----LPGV 978 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-~g-----~~~~ 978 (1206)
.. ..+++.++|++|++.+++ .|++||+.+.. ... ...+.++++.+++.+..+++ .| ...+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~------~~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 69 SKIGLHDLRSRISIIPQDPVLFS-GTIRSNLDPFG------EYS----DEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred HhCCHHHHhhhEEEECCCCcccc-chHHHHhCcCC------CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 32 234567999999988765 69999986431 111 22466778888877655431 01 1135
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCc
Q 000971 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1206)
Q Consensus 979 ~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg 1058 (1206)
..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++ ..+|++++|++ |
T Consensus 138 ~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (221)
T cd03244 138 ENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLD-TI-IDSDRILVLDK-G 213 (221)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-hhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999864 689999999986 45 45999999985 7
Q ss_pred EEEEEcC
Q 000971 1059 QEIYVGP 1065 (1206)
Q Consensus 1059 ~~~~~g~ 1065 (1206)
++++.|+
T Consensus 214 ~~~~~~~ 220 (221)
T cd03244 214 RVVEFDS 220 (221)
T ss_pred eEEecCC
Confidence 8888775
No 458
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.5e-33 Score=327.18 Aligned_cols=223 Identities=22% Similarity=0.302 Sum_probs=184.9
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCC--eeEEEEEEcCc
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISGY 905 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~ 905 (1206)
-++.+|++..+... .+...+++||||++.+||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.
T Consensus 5 lL~V~nL~v~~~~~---------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~ 75 (539)
T COG1123 5 LLEVENLTVEFATD---------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGR 75 (539)
T ss_pred eEEEeceEEEEecC---------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCc
Confidence 47889988776533 12357999999999999999999999999999999999965533 35799999998
Q ss_pred cCCc---c----cccceEEEeecCCC--CCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCC
Q 000971 906 PKKQ---E----TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLP 976 (1206)
Q Consensus 906 ~~~~---~----~~~~~~gyv~q~~~--~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 976 (1206)
++.. . .+.+.++|++|++. +.|-+||.+-+.=...++.. .+.++.++++.++|+.++|.+-... ..
T Consensus 76 dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~--~~~~ea~~~a~elL~~Vgl~~~~~~---~~ 150 (539)
T COG1123 76 DLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK--GSRAEARKRAVELLEQVGLPDPERR---DR 150 (539)
T ss_pred chhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHcCCCChhhh---cc
Confidence 5422 1 12357999999975 56778988777654444443 2367788889999999999876655 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCchHHHHhcCeEEEEe
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~i~~~~d~v~ll~ 1055 (1206)
.+..||||||||+.||+||+.+|++|++||||++||+.++.+|+++|+++.+ .|.++|+||||+. -+.+.+|||++|.
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~-Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLG-VVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHH-HHHHhcCeEEEEE
Confidence 2578999999999999999999999999999999999999999999999975 5999999999997 4788999999999
Q ss_pred cCcEEEEEcCC
Q 000971 1056 RGGQEIYVGPL 1066 (1206)
Q Consensus 1056 ~gg~~~~~g~~ 1066 (1206)
+ |+++..|+.
T Consensus 230 ~-G~iVE~G~~ 239 (539)
T COG1123 230 K-GEIVETGPT 239 (539)
T ss_pred C-CEEEEecCH
Confidence 5 799999985
No 459
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.1e-33 Score=304.02 Aligned_cols=199 Identities=21% Similarity=0.318 Sum_probs=165.3
Q ss_pred EeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-ccceEEEecCCCCCCCCCCHHH
Q 000971 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-PERTAAYISQHDNHIGEMTVRE 245 (1206)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1206)
+++|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 457999999999999999999999999999999999987 999999999875432 2457999999999999999999
Q ss_pred HHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCC
Q 000971 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1206)
Q Consensus 246 tl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1206)
|+.+...... ... .+....++.+++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 000 001123566889999987766554 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000971 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1206)
Q Consensus 326 GGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1206)
|||||||+||++++.+|++++|||||+|||..++..+.+.|+++... .+++|+.++|..+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999987643 34556667888888889999999999999998
Q ss_pred ecC
Q 000971 406 QGP 408 (1206)
Q Consensus 406 ~G~ 408 (1206)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 460
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.8e-33 Score=349.76 Aligned_cols=208 Identities=28% Similarity=0.424 Sum_probs=169.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+++|+|+|+.++|||.++|+||+|||||||++.|+|.+++. +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 56999999999999999999999999999999999999997 9999999999988765 478999999887777 7
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+|||.++..- .+.++..+++... .+...+ ..|++..||.||+.+.
T Consensus 418 TI~~NI~~g~~~-------------------------at~eei~~a~k~a------~~~d~I--~~lp~g~dt~vge~G~ 464 (567)
T COG1132 418 TIRENIALGRPD-------------------------ATDEEIEEALKLA------NAHEFI--ANLPDGYDTIVGERGV 464 (567)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHh------ChHHHH--HhCcccccceecCCCc
Confidence 999999997421 0001111111110 011222 2357788999996554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.||||||||++||||++.+|+||+||||||+||+.+...|.+.++++. +++|+++ +.|..+.+. .+|+|+||++|
T Consensus 465 -~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~-~aD~IiVl~~G 539 (567)
T COG1132 465 -NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIK-NADRIIVLDNG 539 (567)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHH-hCCEEEEEECC
Confidence 799999999999999999999999999999999999999999998764 3467777 556554444 49999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
++++.|+++++..
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 461
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-33 Score=287.16 Aligned_cols=234 Identities=25% Similarity=0.301 Sum_probs=198.1
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+..+|+++++.. ++.+|++||++|++||+.|||||||||||||.++|+|.....+++|+|.++|.++
T Consensus 3 ~L~I~dLhv~v~~------------~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI 70 (251)
T COG0396 3 MLEIKDLHVEVEG------------KKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDI 70 (251)
T ss_pred eeEEeeeEEEecC------------chhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCccc
Confidence 4788999998852 2479999999999999999999999999999999999987778899999999986
Q ss_pred Cc----ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCC
Q 000971 908 KQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLS 982 (1206)
Q Consensus 908 ~~----~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LS 982 (1206)
.. ...+.-+...+|.|.-.|..|+.+-|..+...+........+....+++.++.+++.+ +.++.+. .++|
T Consensus 71 ~~l~~~ERAr~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN----~GFS 146 (251)
T COG0396 71 LELSPDERARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVN----EGFS 146 (251)
T ss_pred ccCCHhHHHhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccC----CCcC
Confidence 43 2345567889999999999999999987655433221113345667899999999998 6777665 3799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhc--CeEEEEecCcEE
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAF--DELFLMKRGGQE 1060 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~--d~v~ll~~gg~~ 1060 (1206)
||||||..|+..++.+|++.+||||-||||..+-+.|-+.+..+++.|++++++||.. .+..+. |++.+|.+ |++
T Consensus 147 GGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~--rll~~i~pD~vhvl~~-GrI 223 (251)
T COG0396 147 GGEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQ--RLLDYIKPDKVHVLYD-GRI 223 (251)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHH--HHHhhcCCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999999999999999995 467776 99999996 799
Q ss_pred EEEcCCCcchhHHHHHHHhCCCcccC
Q 000971 1061 IYVGPLGRHSCQLISYFEAIPGVEKI 1086 (1206)
Q Consensus 1061 ~~~g~~~~~~~~~~~yf~~~~g~~~~ 1086 (1206)
+..|.. ++..+++.. |+..|
T Consensus 224 v~sG~~-----el~~~le~~-gy~~~ 243 (251)
T COG0396 224 VKSGDP-----ELAEELEEK-GYDWL 243 (251)
T ss_pred EecCCH-----HHHHHHHHh-chHHh
Confidence 999984 688888885 55433
No 462
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=313.88 Aligned_cols=209 Identities=25% Similarity=0.384 Sum_probs=170.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|+...++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 9999999998754332 34699999998888899
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||.||+.|+..... ..+. ... .+....++.+++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~~----------------~~~------------~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG----------------RLS------------AEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhcc----------------CCC------------HHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988531000 0000 000 001123567888999987777655
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|..+++.+++|+|++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666788888999999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987653
No 463
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=320.20 Aligned_cols=238 Identities=28% Similarity=0.439 Sum_probs=191.5
Q ss_pred HHhhcCCCCCcceEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeeceeeeEeCCeEEEEEc
Q 000971 106 RIDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLG 185 (1206)
Q Consensus 106 ~~~~~~~~~p~~~v~f~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilG 185 (1206)
+..++.++-|+-.+..|++++-.. ..++++|+|+||.+.||+-++|+|
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~PP--------------------------------g~~~pil~~isF~l~~G~~lgIIG 369 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAPP--------------------------------GQKKPILKGISFALQAGEALGIIG 369 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecCC--------------------------------CCCCcceecceeEecCCceEEEEC
Confidence 334566666777788888877321 234679999999999999999999
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCCCCHHHHHHHHhhhcCCCchhhH
Q 000971 186 PPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYEL 262 (1206)
Q Consensus 186 p~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~ 262 (1206)
|||||||||.++|.|..+|. +|.|.+||.+++.+++. +.+||.||+-.+|+. ||.|||. |+.
T Consensus 370 PSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa---Rf~-------- 434 (580)
T COG4618 370 PSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA---RFG-------- 434 (580)
T ss_pred CCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH---hcc--------
Confidence 99999999999999999987 99999999999988765 789999998777765 9999995 221
Q ss_pred hHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccccCChhhhhHHHHHHHHhcCC
Q 000971 263 LTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPA 342 (1206)
Q Consensus 263 ~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~ 342 (1206)
++.|.+...+|+...+ ..| -++.|++.+||.||+.+. +||||||||+++|||++++|
T Consensus 435 --------------~~~d~~kIieAA~lAg-----vHe---lIl~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P 491 (580)
T COG4618 435 --------------EEADPEKVIEAARLAG-----VHE---LILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDP 491 (580)
T ss_pred --------------ccCCHHHHHHHHHHcC-----hHH---HHHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCC
Confidence 1223333333322211 112 256799999999998765 89999999999999999999
Q ss_pred ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChHHHHHHH
Q 000971 343 LALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFF 416 (1206)
Q Consensus 343 ~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~f 416 (1206)
.+++||||-|.||+.-...+.+.|.... ..++|+|+..|. +.+...+|+|++|++|++-.+||++|++...
T Consensus 492 ~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvviaHR--Ps~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 492 FLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVIAHR--PSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred cEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEEecC--HHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 9999999999999999999999998864 456666664443 4688899999999999999999999998753
No 464
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-34 Score=314.07 Aligned_cols=210 Identities=24% Similarity=0.370 Sum_probs=164.6
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ +.+.+|+|+|++|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~------------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~v~~~g~~~~ 66 (236)
T cd03253 1 IEFENVTFAYD------------PGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDV--SSGSILIDGQDIR 66 (236)
T ss_pred CEEEEEEEEeC------------CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCEEEECCEEhh
Confidence 35788887763 123599999999999999999999999999999999998653 4799999997653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-C-----CCCCC
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGVS 979 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~~ 979 (1206)
. ..+++.++|++|++.+++ .||+||+.+... ....+ .+.+.++.+++.+..+.+. | ...+.
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 136 (236)
T cd03253 67 EVTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDE----EVIEAAKAAQIHDKIMRFPDGYDTIVGERGL 136 (236)
T ss_pred hCCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHH----HHHHHHHHcCcHHHHHhccccccchhhcCCC
Confidence 2 234567999999988775 699999987531 11111 1344455555544332221 1 11246
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcE
Q 000971 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1206)
Q Consensus 980 ~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~ 1059 (1206)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ |.|||+++|++. .+ ..+|++++|++ |+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~ 212 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GR 212 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999876 999999999986 35 45999999986 68
Q ss_pred EEEEcCC
Q 000971 1060 EIYVGPL 1066 (1206)
Q Consensus 1060 ~~~~g~~ 1066 (1206)
+++.|+.
T Consensus 213 i~~~~~~ 219 (236)
T cd03253 213 IVERGTH 219 (236)
T ss_pred EEeeCCH
Confidence 8888764
No 465
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=351.79 Aligned_cols=209 Identities=22% Similarity=0.379 Sum_probs=166.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45999999999999999999999999999999999999997 9999999999987654 467999999987776 6
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++..-. .+.+...+++... -.+..++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~~------------------------~~~~~i~~al~~~------~l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTEQ------------------------YSREQIEEAARMA------YAMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCCC------------------------CCHHHHHHHHHHh------CcHHHHH--hcccccCceeCCCC-
Confidence 9999998753100 0101111111000 0111222 35677899999865
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
..||||||||++|||+|+++|+|++||||||+||+.++..+.+.|+++. .++|+|+. +|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~V-tHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLVI-AHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecch-HHHHhCCEEEEEECC
Confidence 4799999999999999999999999999999999999999999998763 34566654 4444 567789999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
++++.|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 466
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=3.3e-33 Score=300.50 Aligned_cols=183 Identities=25% Similarity=0.307 Sum_probs=153.3
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++ ++.+|+|+||++++||++||+|+||||||||+++|+|.....+.+|+|.+||.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~ 67 (200)
T cd03217 1 LEIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDIT 67 (200)
T ss_pred CeEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECC
Confidence 35788887763 24699999999999999999999999999999999997311135799999998764
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 000971 909 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1206)
Q Consensus 909 ~~---~-~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 984 (1206)
.. . .++.++|++|++.+++..|+++++ +.. ...||||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l----------------------------------~~~-----~~~LS~G 108 (200)
T cd03217 68 DLPPEERARLGIFLAFQYPPEIPGVKNADFL----------------------------------RYV-----NEGFSGG 108 (200)
T ss_pred cCCHHHHhhCcEEEeecChhhccCccHHHHH----------------------------------hhc-----cccCCHH
Confidence 31 1 234599999998888888887765 000 1369999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHH-hcCeEEEEecCcEEEEE
Q 000971 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFD-AFDELFLMKRGGQEIYV 1063 (1206)
Q Consensus 985 qrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~-~~d~v~ll~~gg~~~~~ 1063 (1206)
||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+ .+|++++|++ |+++..
T Consensus 109 ~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~ 186 (200)
T cd03217 109 EKKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKS 186 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999877999999999986 4555 6999999985 788888
Q ss_pred cC
Q 000971 1064 GP 1065 (1206)
Q Consensus 1064 g~ 1065 (1206)
|+
T Consensus 187 ~~ 188 (200)
T cd03217 187 GD 188 (200)
T ss_pred cc
Confidence 85
No 467
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.8e-34 Score=312.75 Aligned_cols=209 Identities=23% Similarity=0.353 Sum_probs=165.0
Q ss_pred EEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000971 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1206)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1206)
.+.++|+++.++.. ++..+|+++|+.|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 78 (226)
T cd03248 11 IVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQP--QGGQVLLDGKPI 78 (226)
T ss_pred eEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCcEEEECCCch
Confidence 48899999887521 113599999999999999999999999999999999998663 479999999865
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHc--CCccccccccCCCCCCCCC
Q 000971 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV--ELKPLIQSLVGLPGVSGLS 982 (1206)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l--~L~~~~~~~~g~~~~~~LS 982 (1206)
.. ..+++.++|++|++.+++ .||+||+.+..................+++.++.+ |+.+..+.. +..||
T Consensus 79 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~-----~~~LS 152 (226)
T cd03248 79 SQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEK-----GSQLS 152 (226)
T ss_pred HHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcC-----CCcCC
Confidence 32 223567999999987775 69999998753211000000011112356778888 777665554 45799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 983 gGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++ ..+|++++|++|
T Consensus 153 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~g 224 (226)
T cd03248 153 GGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLS-TV-ERADQILVLDGG 224 (226)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHH-HH-HhCCEEEEecCC
Confidence 9999999999999999999999999999999999999999999865 699999999987 45 459999999864
No 468
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=310.30 Aligned_cols=210 Identities=18% Similarity=0.249 Sum_probs=164.9
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCC--C---ccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1206)
++|+|+|+.|++|++++|+|||||||||||++|+|.++ |....+|+|.++|.++... . .++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2112389999999987531 1 135799999998778
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+ +||+||+.+.......... .+....++.+++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLSR---------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCCH---------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999886532210000 001123566788888742111111 1
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.....|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++. .+ ++|+.++|...++.+++|+|++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 2345799999999999999999999999999999999999999999999874 24 45666778888888999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 469
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-33 Score=350.47 Aligned_cols=206 Identities=21% Similarity=0.275 Sum_probs=166.6
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1206)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5899999999999999999999999999999999999998 9999999999987665 4789999999988876 9
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
++|||.++.. . . .+.+.+.++ + . -.++.++ .|++..||.+|+.+ .
T Consensus 431 i~~NI~~~~~---~-~-d~~i~~a~~------------------~---~------gl~~~i~--~lp~Gldt~i~e~g-~ 475 (592)
T PRK10790 431 FLANVTLGRD---I-S-EEQVWQALE------------------T---V------QLAELAR--SLPDGLYTPLGEQG-N 475 (592)
T ss_pred HHHHHHhCCC---C-C-HHHHHHHHH------------------H---c------CcHHHHH--hccccccccccCCC-C
Confidence 9999998631 0 0 011111110 0 0 0111222 25667799999865 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.||||||||++|||||+.+|+|++||||||+||+.+...|.+.|+++. .++|+|+..|++ +....||+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999998864 346766655554 5567799999999999
Q ss_pred EEEecChHHHHH
Q 000971 403 IVYQGPRELVLE 414 (1206)
Q Consensus 403 iv~~G~~~~~~~ 414 (1206)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 470
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.8e-33 Score=306.03 Aligned_cols=195 Identities=22% Similarity=0.368 Sum_probs=161.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCC--C---ccceEEEecCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHIG 239 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~~~~ 239 (1206)
..+|+++|+.++||++++|+|||||||||||++|+|.++++ +|+|.++|.++... . .++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999887 99999999987421 1 1357999999998999
Q ss_pred CCCHHHHHHHHhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 240 ~lTV~Etl~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
.+||+||+.++.. .++... .+....++.+++.+||++..+..+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMSK----------------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999988642 111000 011123566788999987666654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++|+.++|...++.+++|+|++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998864 34 45666788888999999999999
Q ss_pred cCCeE
Q 000971 399 SDGQI 403 (1206)
Q Consensus 399 ~~G~i 403 (1206)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 471
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.4e-33 Score=312.36 Aligned_cols=208 Identities=28% Similarity=0.405 Sum_probs=170.4
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999987 9999999998765432 24689999998778889
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.++..... .... .+ . .+....++.+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~~---------~~~~-------~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SLWA-------GD-S-------------PHDAAVVDRALARTELSHLADRDMS---- 136 (256)
T ss_pred CHHHHHHhcchhhh---------hhcc-------CC-C-------------HHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 99999988531000 0000 00 0 0011235678889999876666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|..+++.+++|+|++|++|
T Consensus 137 -~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 137 -TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 6999999999999999999999999999999999999999999998753 3 455666788888999999999999999
Q ss_pred eEEEecChHHH
Q 000971 402 QIVYQGPRELV 412 (1206)
Q Consensus 402 ~iv~~G~~~~~ 412 (1206)
++++.|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999998765
No 472
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.6e-33 Score=305.43 Aligned_cols=194 Identities=24% Similarity=0.334 Sum_probs=160.3
Q ss_pred eeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCC--CCCCHHHHHHHhh
Q 000971 862 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTVYESLLYSA 939 (1206)
Q Consensus 862 ~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~~Tv~e~l~~~a 939 (1206)
|+|++|+++||+|+||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|++.++ ..+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPP--AKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 46899999999999999999999999998663 47999999987532 345689999998664 3479999998753
Q ss_pred hhcCC-CCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 000971 940 WLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1018 (1206)
Q Consensus 940 ~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~ 1018 (1206)
..... ........+..+.++++.+++.+..+..+ ..||+|||||++||++|+.+|++|||||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 00111233456889999999988777764 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1019 VMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1019 i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
+.+.|+++.++|.|||+++|+++ ++.+.+|+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999987 578899999999 5 7999998853
No 473
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=309.51 Aligned_cols=211 Identities=20% Similarity=0.318 Sum_probs=166.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1206)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998641 113899999999875421 13569999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++ +||+||+.|.....+.... .+....++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 87 8999999986543221000 001123456778888742110111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+...+.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|...++.++||+|++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEE
Confidence 234557999999999999999999999999999999999999999999998753 3 4555577778889999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999998764
No 474
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=312.40 Aligned_cols=211 Identities=21% Similarity=0.325 Sum_probs=166.4
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCC--C---ccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1206)
.+|+|+|+.|+||++++|+|||||||||||++|+|.+++. ...+|+|.++|.++... . .++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5999999999999999999999999999999999998741 01389999999987532 1 135799999998888
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+. ||.||+.|+...++.... . .+....++.+++.+||.+...... +
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 75 999999987543221000 0 001123566788899864221111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++..++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998753 3 45566778888888999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|+++++|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 475
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=311.23 Aligned_cols=212 Identities=21% Similarity=0.336 Sum_probs=167.0
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1206)
.++|+|+|+.|++|++++|+|||||||||||++|+|.++|.- ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 359999999999999999999999999999999999986410 1389999999887421 123579999999989
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||+||+.++....+.... .+....++.+++.+||........
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL- 142 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 9999999999886543211000 011223566788888842111111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+..+..|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++++ + .+|+.++|...++.+++|+|++
T Consensus 143 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~ 219 (258)
T PRK14241 143 DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAF 219 (258)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999998743 3 4566678888889999999999
Q ss_pred Ec------CCeEEEecChHHHH
Q 000971 398 LS------DGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~------~G~iv~~G~~~~~~ 413 (1206)
|+ +|++++.|+++++.
T Consensus 220 l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 220 FNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EecccCCCCceEEecCCHHHHH
Confidence 96 79999999988764
No 476
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=310.09 Aligned_cols=210 Identities=18% Similarity=0.265 Sum_probs=166.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCC---CCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL---DSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN 236 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l---~~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~ 236 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.. ++. ..+|+|.++|.++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 45999999999999999999999999999999999973 331 13899999999876421 1356999999988
Q ss_pred CCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000971 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1206)
Q Consensus 237 ~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1206)
.++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 787 6999999886543211000 001123567788899865322222
Q ss_pred cCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000971 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1206)
Q Consensus 317 g~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1206)
+..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+..++.++||+|+
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEE
Confidence 23455799999999999999999999999999999999999999999999874 34 455667788888999999999
Q ss_pred EEcCCeEEEecChHHHH
Q 000971 397 LLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1206)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 477
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.5e-33 Score=310.47 Aligned_cols=207 Identities=24% Similarity=0.351 Sum_probs=168.2
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCee-----CCCCCc-------cceEEEec
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHD-----MGEFVP-------ERTAAYIS 232 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~-----~~~~~~-------~~~~~yv~ 232 (1206)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999987 9999999987 654322 23599999
Q ss_pred CCC--CCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc
Q 000971 233 QHD--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV 310 (1206)
Q Consensus 233 Q~d--~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1206)
|++ .+++.+|+.||+.+......... + .+....++++++.+|+..
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGARH-Y--------------------------------GDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccCc-H--------------------------------HHHHHHHHHHHHHcCCCh
Confidence 986 36788899999976432111000 0 001223567889999974
Q ss_pred -cccccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHH
Q 000971 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1206)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1206)
..++.+ ..|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++... .+.+|+.++|...++.
T Consensus 143 ~~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHH
Confidence 455444 479999999999999999999999999999999999999999999987653 3456666888888999
Q ss_pred hhcCeEEEEcCCeEEEecChHHHH
Q 000971 390 DLFDDIILLSDGQIVYQGPRELVL 413 (1206)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~ 413 (1206)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988763
No 478
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.7e-33 Score=347.90 Aligned_cols=213 Identities=29% Similarity=0.432 Sum_probs=175.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++|++|.|+. +++.+|+|+|++++||+.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 315 ~~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~ 381 (544)
T TIGR01842 315 GHLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGAD 381 (544)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEe
Confidence 36999999999852 124689999999999999999999999999999999998764 47999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
... ..+++.++||+|++.+++. |++||+.+.. .+.+.+ .++++++..++.+.. |+.+|..
T Consensus 382 i~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 451 (544)
T TIGR01842 382 LKQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPE----KIIEAAKLAGVHELILRLPDGYDTVIGPG 451 (544)
T ss_pred hhhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHH----HHHHHHHHhChHHHHHhCccccccccCCC
Confidence 643 3456789999999988875 9999997532 122222 355666666655433 3445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
...||||||||++|||||+++|++|+|||||||||+.++..+++.|+++..+|+|||+++|+++ ..+.+|++++|++
T Consensus 452 -g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~i~~l~~ 528 (544)
T TIGR01842 452 -GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDKILVLQD 528 (544)
T ss_pred -cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999998666899999999986 4678999999986
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|++++.|+.
T Consensus 529 -G~i~~~g~~ 537 (544)
T TIGR01842 529 -GRIARFGER 537 (544)
T ss_pred -CEEEeeCCH
Confidence 799999874
No 479
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-33 Score=297.05 Aligned_cols=176 Identities=27% Similarity=0.461 Sum_probs=149.2
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++. ....+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (178)
T cd03247 1 LSINNVSFSYPE-----------QEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKP--QQGEITLDGVPVS 67 (178)
T ss_pred CEEEEEEEEeCC-----------CCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCEEHH
Confidence 357888877641 112599999999999999999999999999999999998663 4799999998653
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 000971 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1206)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 986 (1206)
. ..+++.++|++|++.+++ .|++||+ +..||+|||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~i------------------------------------------~~~LS~G~~ 104 (178)
T cd03247 68 DLEKALSSLISVLNQRPYLFD-TTLRNNL------------------------------------------GRRFSGGER 104 (178)
T ss_pred HHHHHHHhhEEEEccCCeeec-ccHHHhh------------------------------------------cccCCHHHH
Confidence 2 234567899999987765 6888876 136999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 987 qrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. .+ +.+|++++|++ |++++.|
T Consensus 105 qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~~~~l~~-g~i~~~~ 178 (178)
T cd03247 105 QRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVL-KDKTLIWITHHLT-GI-EHMDKILFLEN-GKIIMQG 178 (178)
T ss_pred HHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999985 5899999999987 34 56999999985 6877654
No 480
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-33 Score=308.35 Aligned_cols=212 Identities=21% Similarity=0.294 Sum_probs=168.1
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|+..+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111389999999987532 124579999999989
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++.+||+||+.++.+..+.... .+....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 9999999999876432110000 001123566788888864211111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+..+..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++.. + ++|+.++|..+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123557999999999999999999999999999999999999999999999853 3 4566677888899999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 481
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.4e-31 Score=338.16 Aligned_cols=123 Identities=23% Similarity=0.292 Sum_probs=99.8
Q ss_pred CCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHhh---CCcEEE
Q 000971 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1003 (1206)
Q Consensus 928 ~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqrl~ia~aL~~---~P~iL~ 1003 (1206)
.+||.|.+.|...+. .. ....++|+.+||... .++. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 357777776654331 01 124578888999753 4444 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEe-----cCcEEEEEcCC
Q 000971 1004 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1206)
Q Consensus 1004 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~-----~gg~~~~~g~~ 1066 (1206)
|||||+|||+.....+++.|+++.+.|.|||+++|++. +...+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999986 346799999994 57899999875
No 482
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=307.64 Aligned_cols=212 Identities=19% Similarity=0.274 Sum_probs=167.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.+++....+|+|.++|+++..... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 469999999999999999999999999999999999975311238999999998865432 357999999988887 6
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
||+||+.++...++.... . ......++.+++.+||........ +...
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999986433211000 0 001123456788899853211111 2345
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
+.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++. .+ ++|+.++|..+++.+.+|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEECC
Confidence 6799999999999999999999999999999999999999999999874 24 55666788888899999999999999
Q ss_pred eEEEecChHHHH
Q 000971 402 QIVYQGPRELVL 413 (1206)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1206)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988763
No 483
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=351.29 Aligned_cols=211 Identities=25% Similarity=0.370 Sum_probs=176.8
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++++||+|.++. ++.+|+|+|++++||+++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~ 398 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTD 398 (588)
T ss_pred CeEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEE
Confidence 36999999999851 13499999999999999999999999999999999998774 48999999987
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 000971 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1206)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 976 (1206)
+.. ..+++.++||+|++.+++ -|++||+.++. + +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 399 i~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~----d~~i~~al~~~~l~~~i~~lp~gldt~i~~~ 468 (588)
T PRK13657 399 IRTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DAT----DEEMRAAAERAQAHDFIERKPDGYDTVVGER 468 (588)
T ss_pred hhhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCC----HHHHHHHHHHhCHHHHHHhCcccccchhcCC
Confidence 654 356778999999998876 69999998752 1 222 23477788888876544 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEec
Q 000971 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1206)
Q Consensus 977 ~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~ 1056 (1206)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .++|||++||+++ ..+.+|++++|++
T Consensus 469 -g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~ii~l~~ 544 (588)
T PRK13657 469 -GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADRILVFDN 544 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999874 4799999999985 5688999999985
Q ss_pred CcEEEEEcCC
Q 000971 1057 GGQEIYVGPL 1066 (1206)
Q Consensus 1057 gg~~~~~g~~ 1066 (1206)
|+++..|+.
T Consensus 545 -G~i~~~g~~ 553 (588)
T PRK13657 545 -GRVVESGSF 553 (588)
T ss_pred -CEEEEeCCH
Confidence 788888873
No 484
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-33 Score=308.49 Aligned_cols=210 Identities=21% Similarity=0.334 Sum_probs=165.2
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1206)
.+|+|+|+.|++|++++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++..+
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222389999999987432 1245799999998777
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+ +||+||+.++....+.... ......++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 7 8999999986543221000 001123456677787743211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..++.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++.+ + .+|+.++|+.+++.+.||+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 45666778888899999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 485
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-33 Score=301.87 Aligned_cols=192 Identities=27% Similarity=0.393 Sum_probs=160.4
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCCCCCCCC
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1206)
|+|+.|++ ++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998875311 1357999999998899999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+||+.+...... . . .....++.+++.+||++..+..+ +
T Consensus 92 ~~~~l~~~~~~~~---~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRKR---N--------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhCC---H--------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 9999987642110 0 0 01123566788999987666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|..+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 799999999999999999999999999999999999999999999886533 4556667888888999999999999999
Q ss_pred EEEec
Q 000971 403 IVYQG 407 (1206)
Q Consensus 403 iv~~G 407 (1206)
+++.|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 486
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.1e-33 Score=295.00 Aligned_cols=168 Identities=27% Similarity=0.449 Sum_probs=145.5
Q ss_pred EEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 000971 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1206)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1206)
++++|+++.++. .+..+++++|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (173)
T cd03246 1 LEVENVSFRYPG-----------AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRP--TSGRVRLDGADIS 67 (173)
T ss_pred CEEEEEEEEcCC-----------CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEEcc
Confidence 357888877641 123599999999999999999999999999999999998663 4799999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 000971 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1206)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 985 (1206)
. ..+++.++|++|++.+++ .||+||+ |||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l---------------------------------------------LS~G~ 101 (173)
T cd03246 68 QWDPNELGDHVGYLPQDDELFS-GSIAENI---------------------------------------------LSGGQ 101 (173)
T ss_pred cCCHHHHHhheEEECCCCcccc-CcHHHHC---------------------------------------------cCHHH
Confidence 2 234567999999987776 4998876 89999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecC
Q 000971 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1206)
Q Consensus 986 rqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~g 1057 (1206)
|||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. .+ +.+|++++|++|
T Consensus 102 ~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~v~~l~~G 171 (173)
T cd03246 102 RQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADRILVLEDG 171 (173)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 34 689999999864
No 487
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=309.94 Aligned_cols=211 Identities=18% Similarity=0.305 Sum_probs=165.6
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1206)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 358999999999999999999999999999999999986 3212489999999987531 113569999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++. ||+||+.|.....+.... .+....++.+++.+||.+......
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l- 149 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL- 149 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-
Confidence 875 999999886433211000 001123456778888753211111
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+...+.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++. .+ .+++.++|..+++.+++|+|++
T Consensus 150 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~ 226 (259)
T PRK14274 150 HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQTAF 226 (259)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCEEEE
Confidence 23455799999999999999999999999999999999999999999999874 24 4555577778889999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|+++.+|+++++.
T Consensus 227 l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 227 FYMGELVECNDTNKMF 242 (259)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998763
No 488
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=279.47 Aligned_cols=204 Identities=23% Similarity=0.334 Sum_probs=174.6
Q ss_pred CceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCC-------------c---ccccce
Q 000971 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK-------------Q---ETFARI 915 (1206)
Q Consensus 852 ~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~-------------~---~~~~~~ 915 (1206)
+...+|++||+..+.|+++.|+|.|||||||+|+||.-..++ ..|.|.+||..+. . ...+..
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P--~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCC--CCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 456799999999999999999999999999999999876553 4799999996431 0 112345
Q ss_pred EEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHH
Q 000971 916 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVEL 995 (1206)
Q Consensus 916 ~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL 995 (1206)
.|+|+|+..++..+||.||+.-.-.-- ...++.+..++.+..|..+|+.+.++.++ ..|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHHH
Confidence 799999999999999999997432111 23456777788899999999999999874 57999999999999999
Q ss_pred hhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCC
Q 000971 996 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1206)
Q Consensus 996 ~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~ 1066 (1206)
+.+|++++.|||||.|||+---++++.+++++++|+|.+++||.+.. ..+...+|+.|.+ |.+-..|++
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P 236 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPP 236 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCCh
Confidence 99999999999999999999999999999999999999999999864 5567889999996 789899986
No 489
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.9e-33 Score=356.71 Aligned_cols=206 Identities=23% Similarity=0.318 Sum_probs=164.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.+++++.. ++.++||+|++.+|+ .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45899999999999999999999999999999999999998 9999999999987664 478999999987775 6
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++.. +.+.+...+++...+ .+..+ -.|+...||.+|+.+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~------l~~~i--~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAA------IHDVI--TSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC------CHHHH--HhCcCcccceeccCC-
Confidence 99999987421 001111111111000 11111 235667789999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
.+||||||||++||||++++|+|++||||||+||+.+...|.+.|++ .++|+|+ ++|.. +....||+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 58999999999999999999999999999999999999999999975 3556665 45554 455679999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
++++.|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 490
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-34 Score=299.40 Aligned_cols=195 Identities=27% Similarity=0.408 Sum_probs=170.8
Q ss_pred ceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCC------c-cceEEEecCCCCCCCCCC
Q 000971 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------P-ERTAAYISQHDNHIGEMT 242 (1206)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~------~-~~~~~yv~Q~d~~~~~lT 242 (1206)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. + +|.+|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 578888776799999999999999999999999998 999999998764322 2 478999999999999999
Q ss_pred HHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCcccc
Q 000971 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1206)
Q Consensus 243 V~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1206)
|+-||.|+.... .....|.+.+.||++|..+.. +.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999975321 011246788999999988754 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000971 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1206)
Q Consensus 323 ~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1206)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.+. -+.-|+.++|-..|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 79999999999999999999999999999999999999999999998764 46777889999999999999999999999
Q ss_pred EEEecChHHHH
Q 000971 403 IVYQGPRELVL 413 (1206)
Q Consensus 403 iv~~G~~~~~~ 413 (1206)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999999875
No 491
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-32 Score=307.76 Aligned_cols=206 Identities=24% Similarity=0.282 Sum_probs=166.0
Q ss_pred eEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCC-CceeEEEECCeeCCCCCcc-ceEEEecCCCC--CCCCC
Q 000971 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVPE-RTAAYISQHDN--HIGEM 241 (1206)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~nG~~~~~~~~~-~~~~yv~Q~d~--~~~~l 241 (1206)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++...... +.++|++|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998710 0289999999987643222 56999999974 45678
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc---cccccccC
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV---CADTMVGD 318 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 318 (1206)
|+.+++.+.+...+.. . ....+..+++.+||.+ ..++
T Consensus 97 ~~~~~~~~~~~~~~~~-~-----------------------------------~~~~~~~~l~~~~l~~~~~~~~~---- 136 (254)
T PRK10418 97 TMHTHARETCLALGKP-A-----------------------------------DDATLTAALEAVGLENAARVLKL---- 136 (254)
T ss_pred cHHHHHHHHHHHcCCC-h-----------------------------------HHHHHHHHHHHcCCCChhhhhhc----
Confidence 9999987643321100 0 0123566788999975 2343
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
.+..|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|+++++. .+++|+.++|..+++.+.+|+|++|
T Consensus 137 -~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 137 -YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred -CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEE
Confidence 34579999999999999999999999999999999999999999999988653 3455666778888888999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 492
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-34 Score=300.26 Aligned_cols=191 Identities=24% Similarity=0.399 Sum_probs=167.4
Q ss_pred cceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 000971 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1206)
Q Consensus 859 ~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~Tv 931 (1206)
++++..+.--+|||-|+||||||||+|+|+|...+ .+|.|.+||.-... ..-+|.+|||+|+..+||++||
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rP--deG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tV 93 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRP--DEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTV 93 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCc--cccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEE
Confidence 56777766479999999999999999999998775 48999999974321 2246889999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000971 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1206)
Q Consensus 932 ~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgL 1011 (1206)
+.||.|+.+.- .....+++.+++|+.++.++.. ..|||||||||+|||||++.|++|+||||.++|
T Consensus 94 rgNL~YG~~~~---------~~~~fd~iv~lLGI~hLL~R~P-----~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSL 159 (352)
T COG4148 94 RGNLRYGMWKS---------MRAQFDQLVALLGIEHLLDRYP-----GTLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred ecchhhhhccc---------chHhHHHHHHHhCcHHHHhhCC-----CccCcchhhHHHHHHHHhcCCCeeeecCchhhc
Confidence 99999986532 2334789999999999999984 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEcCCC
Q 000971 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1206)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g~~~ 1067 (1206)
|.....+++-.|.++.++ ..-|+.++|.+. |+..++|+|++|.+ |++..+|+.+
T Consensus 160 D~~RK~EilpylERL~~e~~IPIlYVSHS~~-Ev~RLAd~vV~le~-GkV~A~g~~e 214 (352)
T COG4148 160 DLPRKREILPYLERLRDEINIPILYVSHSLD-EVLRLADRVVVLEN-GKVKASGPLE 214 (352)
T ss_pred ccchhhHHHHHHHHHHHhcCCCEEEEecCHH-HHHhhhheEEEecC-CeEEecCcHH
Confidence 999999999999999876 789999999987 89999999999985 7999999963
No 493
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-33 Score=273.91 Aligned_cols=202 Identities=28% Similarity=0.377 Sum_probs=171.1
Q ss_pred CCcccceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc-------cceEEEec
Q 000971 160 SRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYIS 232 (1206)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~-------~~~~~yv~ 232 (1206)
....+.+||++|++.|++||-++|+|||||||||||-+|+|+-.++ +|+|.+-|+++..+.. .+.+++|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3456789999999999999999999999999999999999999998 9999999999876543 26799999
Q ss_pred CCCCCCCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000971 233 QHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1206)
Q Consensus 233 Q~d~~~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1206)
|...++|+||..||+...+.+++-..+ +....+...|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999988776653211 0122355678999999876
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhc
Q 000971 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1206)
Q Consensus 313 dt~vg~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~f 392 (1206)
+.. +..|||||+|||+||||++..|+|||-||||-.||..|..+|.+.|-.+.+. .+++++.++|+. .+..-|
T Consensus 141 ~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc 213 (228)
T COG4181 141 THY-----PAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARC 213 (228)
T ss_pred ccC-----ccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhh
Confidence 644 4579999999999999999999999999999999999999999999887664 456666667764 567789
Q ss_pred CeEEEEcCCeEEE
Q 000971 393 DDIILLSDGQIVY 405 (1206)
Q Consensus 393 D~vilL~~G~iv~ 405 (1206)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 494
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-33 Score=307.69 Aligned_cols=211 Identities=21% Similarity=0.346 Sum_probs=166.5
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCC--CCCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~--~~~~~G~I~~nG~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1206)
..+|+|+|+.|++|++++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 3589999999999999999999999999999999999874 111389999999887532 123579999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++ +||+||+.++....+.... ......+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-H
Confidence 87 8999999986532211000 00112345667778875321111 1
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
+..+..||||||||++||++++.+|++++|||||+|||..+...+.+.|+++.. + .+|+.++|..+++.+++|+|++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 344568999999999999999999999999999999999999999999998742 4 4566677888888999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988764
No 495
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.2e-33 Score=348.69 Aligned_cols=188 Identities=27% Similarity=0.438 Sum_probs=159.3
Q ss_pred cEEEEEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000971 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1206)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1206)
..++|+||+|+|+. ++.+|+|+|++++||+++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p--~~G~I~i~g~~ 398 (529)
T TIGR02868 333 PTLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP--LQGEVTLDGVS 398 (529)
T ss_pred ceEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEE
Confidence 46999999999852 12499999999999999999999999999999999998774 48999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------ccccCCCC
Q 000971 907 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLPG 977 (1206)
Q Consensus 907 ~~~--~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~~ 977 (1206)
+.+ ..+++.++||+|++.+++ -|++||+.++. + +.+ ++.++++++..++.+.. |+.+|..|
T Consensus 399 i~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 399 VSSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR----P-DAT----DEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred hhhHHHHHHhheEEEccCccccc-ccHHHHHhccC----C-CCC----HHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 653 446678999999999886 59999998752 1 222 33478899998887643 55666644
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000971 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 1040 (1206)
Q Consensus 978 ~~~LSgGqrqrl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p 1040 (1206)
.+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|++
T Consensus 469 -~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 -ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 5799999999999999999999999999999999999999999999863 579999999985
No 496
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-33 Score=308.16 Aligned_cols=212 Identities=20% Similarity=0.304 Sum_probs=166.9
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCC--CCCCceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~nG~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1206)
+++|+|+|+.|++|++++|+||||||||||+++|+|..+ +....+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999975 21123899999998875422 24579999999888
Q ss_pred CCCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000971 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1206)
Q Consensus 238 ~~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1206)
++. ||+||+.+....++..... .+....++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHhh
Confidence 885 9999998864322110000 0011235667889998653222222
Q ss_pred CcccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000971 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1206)
Q Consensus 318 ~~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1206)
..++.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++. .+ .+|+.++|...++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEE
Confidence 3455799999999999999999999999999999999999999999999874 34 5566677888888999999999
Q ss_pred EcCCeEEEecChHHHH
Q 000971 398 LSDGQIVYQGPRELVL 413 (1206)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1206)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 497
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.2e-33 Score=296.89 Aligned_cols=175 Identities=29% Similarity=0.445 Sum_probs=146.4
Q ss_pred EEeeEEEEecchhhhhcccccCceEEeecceeeeeCCeEEEEEccCCCcHHHHHhhhcCCCCCCeeEEEEEEcCccCCc-
Q 000971 831 FDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ- 909 (1206)
Q Consensus 831 ~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G~~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~- 909 (1206)
++|+++.++ ++.+|+|+|+.+++|++++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~--~~G~v~~~g~~~~~~ 66 (180)
T cd03214 2 VENLSVGYG-------------GRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKP--SSGEILLDGKDLASL 66 (180)
T ss_pred eeEEEEEEC-------------CeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCcC
Confidence 567777663 24599999999999999999999999999999999998664 47999999976532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 000971 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1206)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~~Tv~e~l~~~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 987 (1206)
..+++.++|++| +++.++|.+..++. +..||+||||
T Consensus 67 ~~~~~~~~i~~~~q-------------------------------------~l~~~gl~~~~~~~-----~~~LS~G~~q 104 (180)
T cd03214 67 SPKELARKIAYVPQ-------------------------------------ALELLGLAHLADRP-----FNELSGGERQ 104 (180)
T ss_pred CHHHHHHHHhHHHH-------------------------------------HHHHcCCHhHhcCC-----cccCCHHHHH
Confidence 122334566665 66777777665554 3579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCchHHHHhcCeEEEEecCcEEEEEc
Q 000971 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1206)
Q Consensus 988 rl~ia~aL~~~P~iL~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~i~~~~d~v~ll~~gg~~~~~g 1064 (1206)
|++|||+|+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 105 rl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~~~ 180 (180)
T cd03214 105 RVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLN-LAARYADRVILLKD-GRIVAQG 180 (180)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998776 899999999987 57789999999985 6777653
No 498
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=309.76 Aligned_cols=211 Identities=24% Similarity=0.327 Sum_probs=168.3
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCC--CCceeEEEECCeeCCCCC----ccceEEEecCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV----PERTAAYISQHDNHI 238 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~nG~~~~~~~----~~~~~~yv~Q~d~~~ 238 (1206)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46999999999999999999999999999999999998751 013899999999876432 245799999998888
Q ss_pred CCCCHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccC
Q 000971 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1206)
Q Consensus 239 ~~lTV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1206)
+ +||+||+.++......... .+....+..+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVPR---------------------------------KEFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 8999999886432110000 011123456778888875432222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000971 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1206)
Q Consensus 319 ~~~~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1206)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|..+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998753 3 46666788888999999999999
Q ss_pred cCCeEEEecChHHHH
Q 000971 399 SDGQIVYQGPRELVL 413 (1206)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1206)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998774
No 499
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.3e-33 Score=352.66 Aligned_cols=206 Identities=23% Similarity=0.392 Sum_probs=161.8
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46899999999999999999999999999999999999997 9999999999987654 468999999987765 6
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++.... +.+...+++...+ .+..++ .|++..||.+|+.+
T Consensus 570 TIreNI~~g~~~~-------------------------~~e~i~~al~~a~------l~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLTDT-------------------------PDEEIMAAAKAAN------AHDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCCCC-------------------------CHHHHHHHHHHcC------CHHHHH--hCCCccCCcccCCC-
Confidence 9999999863210 0011111111000 111222 35667899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
..||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++|+|+ ++|..+ +...+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccHH-HHHhCCEEEEEECC
Confidence 4799999999999999999999999999999999999998888 221 23455555 555544 56779999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
+++++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999998864
No 500
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.8e-33 Score=352.24 Aligned_cols=208 Identities=28% Similarity=0.457 Sum_probs=167.7
Q ss_pred ceEeeceeeeEeCCeEEEEEcCCCCcHHHHHHHHHcCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000971 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1206)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~nG~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1206)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999998 9999999999987765 468999999987776 5
Q ss_pred CHHHHHHHHhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccCccc
Q 000971 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1206)
Q Consensus 242 TV~Etl~f~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1206)
|++|||.++.. +.+.+...+++...+ .+..+ -.|++..||.+|+.+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i--~~lp~gl~T~i~e~G- 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG------VTEFV--RRHPDGLDMQIGERG- 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC------hHHHH--HhCcccccceecCCC-
Confidence 99999987521 011111111111100 11111 246677899999865
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000971 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1206)
Q Consensus 322 ~~LSGGqkkRvsia~~l~~~~~vlllDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1206)
..||||||||++||||++.+|++++||||||+||+.+...|.+.|+++. .++|+|+.. |.. ++...||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~iiIt-Hrl-~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVLVT-HRT-SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEEEe-cCH-HHHHhCCEEEEEeCC
Confidence 4799999999999999999999999999999999999999999998864 356666644 444 456889999999999
Q ss_pred eEEEecChHHHHH
Q 000971 402 QIVYQGPRELVLE 414 (1206)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1206)
++++.|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999998865
Done!