Query 000981
Match_columns 1202
No_of_seqs 419 out of 3467
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 100.0 6E-235 2E-239 2289.9 93.9 1101 8-1187 4-1141(1335)
2 3unc_A Xanthine dehydrogenase/ 100.0 6E-230 2E-234 2227.2 105.6 1098 13-1187 5-1136(1332)
3 1vlb_A Aldehyde oxidoreductase 100.0 2E-148 6E-153 1419.6 71.2 719 12-1185 2-746 (907)
4 1dgj_A Aldehyde oxidoreductase 100.0 2E-147 7E-152 1410.2 67.4 707 12-1168 2-735 (907)
5 3nvz_C Xanthine dehydrogenase/ 100.0 7E-118 2E-122 1118.8 59.2 558 602-1187 1-566 (755)
6 2w3s_B Xanthine dehydrogenase; 100.0 1E-115 4E-120 1103.0 61.1 563 603-1186 2-604 (777)
7 1rm6_A 4-hydroxybenzoyl-COA re 100.0 2E-113 7E-118 1082.9 57.8 558 599-1185 6-599 (769)
8 1ffv_B CUTL, molybdoprotein of 100.0 3E-113 9E-118 1084.9 55.0 578 601-1196 15-661 (803)
9 1n62_B Carbon monoxide dehydro 100.0 3E-112 1E-116 1077.5 54.8 577 602-1196 19-667 (809)
10 1t3q_B Quinoline 2-oxidoreduct 100.0 5E-112 2E-116 1072.8 55.6 548 603-1174 13-612 (788)
11 2w3s_A Xanthine dehydrogenase; 100.0 4E-101 1E-105 915.1 34.3 444 12-549 1-453 (462)
12 3hrd_A Nicotinate dehydrogenas 100.0 1.7E-92 5.7E-97 837.4 42.2 405 599-1019 3-415 (425)
13 3nvw_A Xanthine dehydrogenase/ 100.0 3.1E-58 1E-62 466.3 14.4 161 12-184 3-163 (164)
14 3nvz_B Xanthine dehydrogenase/ 100.0 2E-56 7E-61 507.8 28.3 293 234-550 3-304 (305)
15 3hrd_C Nicotinate dehydrogenas 100.0 8.8E-56 3E-60 500.2 23.4 275 240-550 3-290 (296)
16 1t3q_C Quinoline 2-oxidoreduct 100.0 1.1E-53 3.9E-58 481.1 25.4 271 240-550 5-283 (288)
17 3hrd_D Nicotinate dehydrogenas 100.0 2.2E-53 7.4E-58 431.6 18.0 152 11-186 3-154 (160)
18 1n62_C Carbon monoxide dehydro 100.0 1.3E-52 4.6E-57 473.1 24.9 274 240-550 5-286 (288)
19 1rm6_B 4-hydroxybenzoyl-COA re 100.0 2.7E-52 9.1E-57 474.4 25.1 268 240-548 6-322 (324)
20 1ffv_C CUTM, flavoprotein of c 100.0 6.5E-50 2.2E-54 451.0 26.1 273 240-549 5-285 (287)
21 1ffv_A CUTS, iron-sulfur prote 100.0 2E-50 6.7E-55 412.7 17.0 151 11-185 3-153 (163)
22 1n62_A Carbon monoxide dehydro 100.0 2.8E-50 9.6E-55 412.7 17.4 152 11-185 3-154 (166)
23 1rm6_C 4-hydroxybenzoyl-COA re 100.0 1.4E-45 4.8E-50 378.2 16.5 151 11-185 2-152 (161)
24 1t3q_A Quinoline 2-oxidoreduct 100.0 4E-41 1.4E-45 348.7 16.6 152 10-185 8-159 (168)
25 3hrd_B Nicotinate dehydrogenas 99.9 5.2E-23 1.8E-27 235.4 18.4 144 1038-1189 2-167 (330)
26 3vr8_B Iron-sulfur subunit of 98.8 5.2E-09 1.8E-13 116.4 6.3 69 21-101 55-128 (282)
27 2wdq_B Succinate dehydrogenase 98.6 3.3E-08 1.1E-12 108.1 8.0 68 21-100 21-95 (238)
28 3c8y_A Iron hydrogenase 1; dit 98.6 1.8E-08 6.2E-13 123.8 6.1 107 14-138 2-115 (574)
29 2bs2_B Quinol-fumarate reducta 98.5 2.3E-07 7.8E-12 101.7 8.5 69 21-101 24-96 (241)
30 2h88_B Succinate dehydrogenase 98.5 1.6E-07 5.4E-12 103.6 7.1 69 21-101 31-104 (252)
31 1kf6_B Fumarate reductase iron 98.1 3.5E-06 1.2E-10 92.3 7.4 67 21-101 24-95 (243)
32 1l5p_A Ferredoxin; [2Fe-2S] cl 97.9 3.9E-05 1.3E-09 71.2 9.8 79 13-93 2-91 (93)
33 1uxy_A MURB, uridine diphospho 97.5 8.5E-05 2.9E-09 85.2 6.1 153 240-422 15-180 (340)
34 1iue_A Ferredoxin; electron tr 97.5 0.00015 5.2E-09 67.8 6.5 50 12-64 3-52 (98)
35 2wlb_A ETP1-FD, electron trans 97.4 0.00012 4E-09 69.2 5.5 53 10-65 2-56 (103)
36 1a70_A Ferredoxin; iron-sulfur 97.4 0.0002 7E-09 66.8 6.5 50 12-64 3-52 (97)
37 1jq4_A Methane monooxygenase c 97.3 0.00012 4.2E-09 68.4 4.3 50 12-64 3-55 (98)
38 1wri_A Ferredoxin II, ferredox 97.3 0.00039 1.3E-08 64.3 6.7 49 12-64 2-50 (93)
39 1awd_A Ferredoxin; electron tr 97.3 0.00049 1.7E-08 63.7 7.3 49 13-64 2-50 (94)
40 1frr_A Ferredoxin I; electron 97.2 0.00046 1.6E-08 63.9 6.0 77 12-94 2-87 (95)
41 1frd_A Heterocyst [2Fe-2S] fer 97.1 0.00063 2.1E-08 63.5 6.1 50 12-64 3-54 (98)
42 1hsk_A UDP-N-acetylenolpyruvoy 97.0 0.0013 4.4E-08 75.0 8.6 153 241-422 50-208 (326)
43 1czp_A Ferredoxin I; [2Fe-2S] 96.9 0.0011 3.6E-08 62.0 5.6 50 12-64 3-54 (98)
44 3lxf_A Ferredoxin; iron, iron- 96.8 0.0013 4.5E-08 62.1 5.7 80 13-94 2-99 (104)
45 1xlq_A Putidaredoxin, PDX; [2F 96.6 0.0018 6.1E-08 61.3 5.1 51 13-65 2-54 (106)
46 1uwm_A Ferredoxin VI, FDVI; el 96.6 0.002 6.9E-08 60.9 5.2 51 13-65 2-54 (106)
47 3hui_A Ferredoxin; cytochrome 96.5 0.002 6.9E-08 63.0 4.9 80 13-94 23-120 (126)
48 1i7h_A Ferredoxin; 2Fe-2S,elec 96.5 0.0019 6.5E-08 61.7 4.5 50 13-65 3-57 (111)
49 1b9r_A Protein (terpredoxin); 96.5 0.002 6.9E-08 60.8 4.5 51 13-65 2-54 (105)
50 3tx1_A UDP-N-acetylenolpyruvoy 96.1 0.015 5.2E-07 66.0 9.7 153 241-421 56-213 (322)
51 3i99_A UDP-N-acetylenolpyruvoy 95.4 0.047 1.6E-06 62.7 10.6 153 236-420 26-194 (357)
52 3i9v_3 NADH-quinone oxidoreduc 95.1 0.012 4E-07 75.1 4.7 104 13-129 1-127 (783)
53 1ffv_B CUTL, molybdoprotein of 95.0 0.68 2.3E-05 58.9 20.4 57 788-844 500-567 (803)
54 2vfr_A Xylitol oxidase, aldito 95.0 0.0093 3.2E-07 70.4 3.0 102 242-366 23-124 (422)
55 1doi_A 2Fe-2S ferredoxin; halo 95.0 0.013 4.3E-07 57.5 3.3 48 13-64 29-76 (128)
56 4feh_A Oxidoreductase DPRE1; a 94.9 0.062 2.1E-06 64.4 9.9 155 241-422 44-213 (481)
57 2bt6_A Adrenodoxin 1; rutheniu 94.8 0.02 6.7E-07 54.3 4.2 50 13-65 8-61 (108)
58 2y5c_A Adrenodoxin-like protei 94.8 0.032 1.1E-06 52.9 5.7 79 13-94 7-103 (109)
59 4bby_A Alkyldihydroxyacetoneph 94.8 0.024 8.2E-07 70.7 6.0 108 242-367 208-319 (658)
60 2uuu_A Alkyldihydroxyacetoneph 94.0 0.041 1.4E-06 67.6 5.6 108 242-367 140-250 (584)
61 3pm9_A Putative oxidoreductase 93.9 0.043 1.5E-06 65.7 5.4 107 241-367 53-161 (476)
62 3js8_A Cholesterol oxidase; ch 93.4 0.18 6E-06 61.0 9.4 155 241-422 31-216 (540)
63 1f0x_A DLDH, D-lactate dehydro 93.4 0.05 1.7E-06 66.4 4.7 109 241-367 47-160 (571)
64 3ah7_A [2Fe-2S]ferredoxin; [2F 93.1 0.099 3.4E-06 49.8 5.5 42 19-65 15-57 (113)
65 1krh_A Benzoate 1,2-dioxygenas 92.9 0.079 2.7E-06 60.3 5.3 48 14-64 4-54 (338)
66 1e8g_A Vanillyl-alcohol oxidas 92.9 0.083 2.8E-06 64.6 5.7 109 241-367 72-185 (560)
67 1dgj_A Aldehyde oxidoreductase 92.2 1.6 5.5E-05 56.2 16.5 187 786-976 631-889 (907)
68 1rm6_A 4-hydroxybenzoyl-COA re 91.8 0.88 3E-05 57.6 13.2 188 786-976 457-746 (769)
69 3n9z_C Adrenodoxin; cytochrome 91.8 0.038 1.3E-06 53.7 0.6 82 11-95 5-106 (123)
70 1w1o_A Cytokinin dehydrogenase 91.3 0.19 6.6E-06 61.0 6.2 155 242-422 71-244 (534)
71 2i0k_A Oxidoreductase; MIX alp 91.1 0.17 5.7E-06 61.9 5.4 106 241-366 37-149 (561)
72 1wvf_A 4-cresol dehydrogenase 91.0 0.16 5.5E-06 61.5 5.2 105 241-365 58-167 (520)
73 2pia_A Phthalate dioxygenase r 91.0 0.15 5E-06 57.7 4.5 48 14-64 238-285 (321)
74 1n62_B Carbon monoxide dehydro 90.7 6 0.0002 50.3 19.3 186 788-976 506-786 (809)
75 2exr_A Cytokinin dehydrogenase 90.4 0.23 7.8E-06 60.2 5.7 104 241-366 63-176 (524)
76 1t3q_B Quinoline 2-oxidoreduct 90.3 5.1 0.00017 50.8 18.1 184 788-974 484-761 (788)
77 3rja_A Carbohydrate oxidase; p 88.6 0.65 2.2E-05 55.5 7.7 84 241-325 38-122 (473)
78 1vlb_A Aldehyde oxidoreductase 88.0 1.5 5.2E-05 56.4 11.0 188 786-976 629-889 (907)
79 1y56_A Hypothetical protein PH 87.4 0.55 1.9E-05 56.3 6.1 69 12-97 14-89 (493)
80 3zyv_A AOH1; oxidoreductase, m 87.3 3.5 0.00012 55.4 14.1 60 785-844 1018-1088(1335)
81 3fw9_A Reticuline oxidase; BI- 85.8 1.2 4.2E-05 53.3 7.9 155 241-421 47-214 (495)
82 2bvf_A 6-hydroxy-D-nicotine ox 85.6 0.79 2.7E-05 54.4 6.2 82 241-325 40-121 (459)
83 2y3s_A TAML; oxidoreductase; H 85.3 1.1 3.8E-05 54.2 7.3 80 241-324 60-141 (530)
84 3zyy_X Iron-sulfur cluster bin 85.2 0.8 2.7E-05 56.1 5.9 47 13-64 5-52 (631)
85 2ipi_A Aclacinomycin oxidoredu 84.7 1.3 4.4E-05 53.6 7.4 79 241-323 57-137 (521)
86 2wdx_A Putative hexose oxidase 84.5 1.3 4.4E-05 53.6 7.3 79 241-323 59-139 (523)
87 1zr6_A Glucooligosaccharide ox 83.9 1.2 4.1E-05 53.6 6.6 81 241-324 44-125 (503)
88 3vte_A Tetrahydrocannabinolic 83.7 1.2 3.9E-05 53.8 6.4 83 241-325 55-138 (518)
89 3pop_A GILR oxidase; FAD bindi 83.3 1.5 5E-05 52.7 7.1 79 241-323 36-116 (501)
90 3hrd_B Nicotinate dehydrogenas 79.6 3.9 0.00013 46.3 8.4 59 786-844 21-90 (330)
91 2gqt_A UDP-N-acetylenolpyruvyl 78.3 2.4 8.3E-05 46.5 6.0 99 236-367 18-118 (268)
92 2gag_A Heterotetrameric sarcos 77.0 5.3 0.00018 51.9 9.7 83 11-101 20-112 (965)
93 3nvz_C Xanthine dehydrogenase/ 74.9 2.9 9.9E-05 52.7 6.2 73 786-860 444-527 (755)
94 2w3s_B Xanthine dehydrogenase; 68.1 6 0.0002 50.1 6.8 73 787-861 465-548 (777)
95 3hrd_A Nicotinate dehydrogenas 61.6 12 0.00041 43.8 7.3 58 1055-1131 188-245 (425)
96 3tsh_A Pollen allergen PHL P 4 57.5 13 0.00043 44.5 6.7 82 242-325 55-139 (500)
97 3unc_A Xanthine dehydrogenase/ 51.8 14 0.00047 49.5 6.2 73 786-860 1014-1097(1332)
98 2l32_A Small archaeal modifier 41.5 14 0.00049 32.1 2.7 33 12-45 1-33 (74)
99 2kl0_A Putative thiamin biosyn 41.4 51 0.0018 28.4 6.2 61 15-100 2-63 (73)
100 1tyg_B YJBS; alpha beta barrel 37.4 34 0.0012 30.8 4.5 31 11-45 18-49 (87)
101 2k5p_A THis protein, thiamine- 30.5 27 0.00091 30.7 2.6 65 15-100 2-67 (78)
102 3abf_A 4-oxalocrotonate tautom 27.9 33 0.0011 28.1 2.7 31 813-843 24-57 (64)
103 1erd_A Pheromone ER-2; NMR {Eu 24.6 37 0.0013 24.6 1.9 28 109-136 5-32 (40)
104 1v2y_A 3300001G02RIK protein; 21.3 47 0.0016 30.9 2.5 31 7-38 3-34 (105)
105 1ep3_B Dihydroorotate dehydrog 21.1 34 0.0012 36.7 1.8 16 48-63 223-238 (262)
106 1rrb_A RAF-1 RBD, RAF proto-on 20.7 46 0.0016 30.9 2.3 44 13-64 20-64 (107)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=6.5e-235 Score=2289.89 Aligned_cols=1101 Identities=29% Similarity=0.503 Sum_probs=968.8
Q ss_pred CCcccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceecccccc
Q 000981 8 GGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1202)
Q Consensus 8 ~~~~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1202)
+..+..|.|+|||+++++++++|++|||+|||++++|||||+||+||+||||||+|+++|+.++++.+++|||||+|+++
T Consensus 4 ~~~~~~l~F~vNG~~v~~~~~~p~~tLl~~LR~~~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~ 83 (1335)
T 3zyv_A 4 SKESDELIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICS 83 (1335)
T ss_dssp ---CCCEEEEETTEEEEESSCCTTCBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGG
T ss_pred CCCCCeEEEEECCEEEEeCCCCcCccHHHHHhccCCCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHH
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCc
Q 000981 88 VNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNL 167 (1202)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnl 167 (1202)
+||++|+||||||+++++||||||+|+++|||||||||||||||||+||++ ++.| |++||+++|+|||
T Consensus 84 ~~g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmyall~~-----~~~p-------t~~~ie~al~GNL 151 (1335)
T 3zyv_A 84 LHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRN-----HPEP-------STEQIMETLGGNL 151 (1335)
T ss_dssp CTTCEEECHHHHCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHHTTCC
T ss_pred hcCCEEEeeCCCCCCCCCCCHHHHHHHhcCCCcCCCCCcHHHHHHHHHHHc-----CCCC-------CHHHHHHHhCCcc
Confidence 999999999999988889999999999999999999999999999999965 4555 4999999999999
Q ss_pred cccCCChhHHHHHHHhhhcccccccc-cccccccCCc-----------ccccccCCCCCCCCCCccCCCcccccc----c
Q 000981 168 CRCTGYRPIADACKSFAADVDIEDLG-INSFWAKGES-----------KEVKISRLPPYKHNGELCRFPLFLKKE----N 231 (1202)
Q Consensus 168 CRCtgy~~i~~a~~~~~~~~~~~~~~-~~~c~~~~~~-----------~~~~~~~~~~~~~~~~~~~~p~~l~~~----~ 231 (1202)
|||||||||+||+|+|+.+.+.++.. ...||.+.+. +.+....+++++|+++. +|||+|... .
T Consensus 152 CRCTGYRPIldA~ksfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifppel~~~~~~~~ 230 (1335)
T 3zyv_A 152 CRCTGYRPIVESAKSFCPSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPLDPTQEL-IFPPELMRMAEESQ 230 (1335)
T ss_dssp CSSSCSHHHHHHHHTTCC-----------------------------CCSSCGGGSCCCCGGGSC-CCCHHHHHHHC--C
T ss_pred cccCCCHHHHHHHHHhhccCccccccCCCcccccccccCcccccccccccccccccCCCCccccc-cCCHHHHhhhhccc
Confidence 99999999999999999887665442 2233322111 11345678899999866 899998642 2
Q ss_pred CCceeecC-CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEee--ecccCCeeeeCCCcccccceeecCCcEE
Q 000981 232 SSAMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYK--EVEHYDKYIDIRYIPELSVIRRDQTGIE 308 (1202)
Q Consensus 232 ~~~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k--~~~~~~~lIdl~~I~EL~~I~~~~~~l~ 308 (1202)
...+.+.+ +.+||+|+||+|+++|++ ++|+++||+|||++|++. ....++.+||+++|+||+.|+.++++|+
T Consensus 231 ~~~l~~~g~~~~w~~P~tl~el~~l~~-----~~p~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~ 305 (1335)
T 3zyv_A 231 NTVLTFRGERTTWIAPGTLNDLLELKM-----KHPSAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLT 305 (1335)
T ss_dssp CCCEEEECSSCEEEECSSHHHHHHHHH-----HCTTSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEE
T ss_pred cceeeecCCCceEecCCCHHHHHHHHH-----HCCCCeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEE
Confidence 23467777 899999999999999999 479999999999999942 2367899999999999999999999999
Q ss_pred EcccCcHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEE
Q 000981 309 IGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIM 388 (1202)
Q Consensus 309 IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~ 388 (1202)
|||+|||+++++.|++.+++++.+.+++|++|.+++++|||+||||+||||||||++||+ ||++|+|+|+||+|+|.
T Consensus 306 IGA~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPi---sD~~p~L~A~~A~l~l~ 382 (1335)
T 3zyv_A 306 LGTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPT---SDLNPILGIGNCILNVA 382 (1335)
T ss_dssp EETTCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTT---CSSHHHHGGGTCEEEEE
T ss_pred EcccCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCCc---chHHHHHHhhCCEEEEe
Confidence 999999999999999988888888889999999999999999999999999999999999 99999999999999999
Q ss_pred eCCceEEEehhhhh-c---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcC
Q 000981 389 TGQKCEKLMLEEFL-E---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSP 464 (1202)
Q Consensus 389 s~~g~R~vpl~dF~-~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~ 464 (1202)
+.+|+|++|++||| . +++|+++|||++|+||.+.+ ..+|.+||+++| +++|||+||+||++.+++
T Consensus 383 ~~~g~r~i~l~d~F~~gyrk~~l~~~eil~si~iP~~~~----------~~~~~~yK~s~R-~d~dia~Vnaa~~v~l~~ 451 (1335)
T 3zyv_A 383 STEGIQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSSK----------WEFVSAFRQAPR-QQNAFATVNAGMKVVFKE 451 (1335)
T ss_dssp CSSCEEEEECCTTTSCC----CCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSSCCSEEEEEEEEC--
T ss_pred cCCceEEEechHhhhhcccccccCCCcEEEEeeccCCch----------hhhhhheeeccc-cccchhhheeeeeEEEec
Confidence 99999999998854 3 67899999999999999876 688999999999 799999999999999975
Q ss_pred CCCCCCceeeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC--CcHHHHhHhHHHHHHHH
Q 000981 465 CKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYRSSLAVGFLYEF 542 (1202)
Q Consensus 465 ~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~--~s~~YR~~la~~L~~k~ 542 (1202)
+ +++|+++||+||||+++ |+|+.++|++|+||+|+++++++|++.|.+|+.|.++. +|++||+.||.+||+||
T Consensus 452 ~----~~~v~~~~iafGGma~~-~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf 526 (1335)
T 3zyv_A 452 D----TNTITDLGILYGGIGAT-VISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMF 526 (1335)
T ss_dssp ------CBCSEEEEEEESSSSS-CC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHH
T ss_pred C----CCeEeEEEEEEecCcCc-cccHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 3 47999999999999999 99999999999999999999999999999999887664 68999999999999999
Q ss_pred HHHHhhhccCCCccccCCCCCCCCcccccccccccccccccccccCCccccccccC----CCCCCCCCccccccccccCc
Q 000981 543 FGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLS----REYYPVGEPITKSGAALQAS 618 (1202)
Q Consensus 543 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~----~~~~~iGk~~~r~d~~~kvt 618 (1202)
|+++.+++....+. ..+.++... .+ ....+++++|++.|.|+.. +.+++||||++|+|++.|||
T Consensus 527 ~l~~~~~~~~~~~~---~~~~~~~~~-------~~--~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvt 594 (1335)
T 3zyv_A 527 YLDVLKQLKTRDPH---KYPDISQKL-------LH--ILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHAT 594 (1335)
T ss_dssp HHHHHHHHHHHC---------CCHHH-------HG--GGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHH
T ss_pred HHHHHHhhcccccc---cCCCcchhh-------cc--cccccCCCCCCcccccccccccCCCCCCCCCCCcCcChHHHCC
Confidence 99999876431111 111111111 11 2456788999999999753 45678999999999999999
Q ss_pred cceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCcccCCCcccccCCceeec
Q 000981 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCA 698 (1202)
Q Consensus 619 G~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~ 698 (1202)
|+|+|++|++.+|||||++|||||++||+|++||+++|+++|||++|+|++|+| +.|. ..++|+|++++|+|+
T Consensus 595 G~a~Y~~Di~~~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~aV~T~~DiP--~~~~-----~~~~~~la~d~Vr~~ 667 (1335)
T 3zyv_A 595 GEAVFCDDMSVLPGELFLAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVP--GDNG-----REEESLYAQDEVICV 667 (1335)
T ss_dssp TCCCCSTTSCCCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCS--SCCC-------CCCSSCCSEECST
T ss_pred CcccccccCCCCCCCEEEEEEeCCCCCeEEEEEEhHHHhcCCCeEEEEehhhcC--CcCC-----CCCcccCCCCeEEEc
Confidence 999999999756899999999999999999999999999999999999999999 5442 367899999999999
Q ss_pred CCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCCcccCCccccCCCCCcccccccCCEeEEEEEEEe
Q 000981 699 GQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKL 778 (1202)
Q Consensus 699 GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~af~~a~~vvve~~~~~ 778 (1202)
|||||+|||+|+++|++|+++|+|+| |+|.|.+.++++|++.+++...+ .....||++++|++||++ ||++|++
T Consensus 668 Gq~VA~VvAet~~~A~~Aa~~V~VeY--e~l~P~v~~~~~a~~~~~~~~~~---~~~~~Gd~~~af~~a~~v-ve~~y~~ 741 (1335)
T 3zyv_A 668 GQIVCAVAADSYAHAQQAAKKVKIVY--QDIEPMIVTVQDALQYESFIGPE---RKLEQGNVEEAFQCADQI-LEGEVHL 741 (1335)
T ss_dssp TCEEEEEEESSHHHHHHHHTTCEEEE--EECSCCCCSHHHHHHTTCCEEEE---EEEEESCHHHHTTSSSEE-EEEEEEE
T ss_pred CCEEEEEEECCHHHHHHHhcCCeEEE--EeCCCccCCHHHHhhcccccCcc---ccccCCCHHHHHhhCCeE-EEEEEEE
Confidence 99999999999999999999999999 77856689999999987753211 135789999999999996 9999999
Q ss_pred CcccCCCcCCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCCCCCccHHHHHHHHHH
Q 000981 779 GSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAA 857 (1202)
Q Consensus 779 ~~q~H~~mEp~~avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA 857 (1202)
++|+|+||||++|+|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||+||
T Consensus 742 ~~~~h~~mEp~~~~a~~~~edg~l~v~~sTQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGGFG~K~~~~~~~~~~aAlaA 821 (1335)
T 3zyv_A 742 GGQEHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAA 821 (1335)
T ss_dssp CCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEESCCSCCTTTTSSHHHHHHHHHHHHH
T ss_pred CceeccccCCcceEEEEECCCCeEEEEECCcCHHHHHHHHHHHHCCCCceEEEEeCCccCCCCccccCchHHHHHHHHHH
Confidence 999999999999999998 5788999999999999999999999999999999999999999999876666778899999
Q ss_pred HhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCCccCcEEE
Q 000981 858 YKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHF 936 (1202)
Q Consensus 858 ~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~ 936 (1202)
+++||||||+|||+|+|.++++||++.++|++|+|+||+|+|++++++.|+|+|.+++. ++.....+..++|++||+++
T Consensus 822 ~~~gRPVK~~~tR~E~~~~~~~R~~~~~~~~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ipn~~~ 901 (1335)
T 3zyv_A 822 QKTGRPIRFILERRDDMLITGGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRV 901 (1335)
T ss_dssp HHHCSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHHTTTTBCCSEEEE
T ss_pred HHhCCCEEEEECHHHHHhhcCCCCchheEEEEEecCCCCeeeeeeeeeeccccccccccchhhhhhhhccCcceeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999877 55566677789999999999
Q ss_pred EEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHH
Q 000981 937 DIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKL 1015 (1202)
Q Consensus 937 ~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~ 1015 (1202)
+++.|+||++|++||||||.||++|++|++||++|++|||||+|||++|++++++.+ +.|.+++. .+.+||+++
T Consensus 902 ~~~~v~TN~~~~~a~RG~G~pq~~fa~E~~mD~lA~~lg~DP~elR~~N~~~~~~~~-----~~g~~~~~~~~~~~l~~~ 976 (1335)
T 3zyv_A 902 RGRVCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRT-----IHNQEFDPTNLLQCWEAC 976 (1335)
T ss_dssp EEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHBCCSSCBC-----TTSCBC--CCHHHHHHHH
T ss_pred EEEEEeccCCCCCcccCCCchhheeEecchhhHHHHHhCCCHHHHHHHhccCCCccc-----cCCcccccccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987543 34555444 899999999
Q ss_pred HHhCCchhHHHHHHHHhhcCCcceeeeEeeeeeeccccc-----ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHH
Q 000981 1016 AVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAA 1090 (1202)
Q Consensus 1016 ~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaA 1090 (1202)
++.++|.+|+++.++||+.++|+|||++++++.++.++. +..+.|+|++||+|+|.+|++|||||++|+++||||
T Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~rGi~~~~~~~~~g~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaA 1056 (1335)
T 3zyv_A 977 VENSSYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVAS 1056 (1335)
T ss_dssp HHHTTHHHHHHHHHHHHHHCSSSEEEEEEEEEEEECCCSSGGGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHH
T ss_pred HHhhhHHHHHHhhhhhhccCcceeeeeEEEEEEeeccCCcccccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHH
Confidence 999999999999999999999999999999988887654 468999999999999999999999999999999999
Q ss_pred HHhcccccCCCCCCCCcEEEEcCCCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHH
Q 000981 1091 FALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQ 1170 (1202)
Q Consensus 1091 e~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~~~~~~~elv~~ 1170 (1202)
++||| |+|+|+|..+||+.+|++++|+|||++++.|.||++||++|++||++++++.+ ..+|++++..
T Consensus 1057 e~LGi--------p~e~I~v~~~DT~~~P~~~gt~gSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~~----~~~~~~~~~~ 1124 (1335)
T 3zyv_A 1057 RELKI--------PMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKRLEPIIKQNP----SGTWEEWVKE 1124 (1335)
T ss_dssp HHHTS--------CGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHTTTHHHHST----TSCHHHHHHH
T ss_pred HHhCC--------CHHHEEEecCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----CCCHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999998754 5789999999
Q ss_pred HHhCCCceEEEEeeecC
Q 000981 1171 VHICSSEALSTEFILFN 1187 (1202)
Q Consensus 1171 a~~~~v~l~a~~~~~~~ 1187 (1202)
++..+++|++++||...
T Consensus 1125 ~~~~~v~l~a~~~~~~~ 1141 (1335)
T 3zyv_A 1125 AFVQSISLSATGYFRGY 1141 (1335)
T ss_dssp HHHTTCCCEEEEEECCC
T ss_pred hhhcccceeEEEEeccC
Confidence 99999999999999643
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=6.4e-230 Score=2227.19 Aligned_cols=1098 Identities=31% Similarity=0.530 Sum_probs=982.1
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCce
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCL 92 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 92 (1202)
.|+|+|||+++++.+++|+++||+|||+++||||||+||++|+||||||+|+++|+.++++++++|||||+|+++++|++
T Consensus 5 ~i~~~vNg~~~~~~~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 84 (1332)
T 3unc_A 5 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVA 84 (1332)
T ss_dssp CEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCE
T ss_pred cEEEEECCEEEEeecCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCE
Confidence 69999999999986699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCC
Q 000981 93 ITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTG 172 (1202)
Q Consensus 93 i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRCtg 172 (1202)
|+|||||++.++.||||||||+++|++|||||||||||++|+||++ +|.| |++||+++|+||||||||
T Consensus 85 i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~ll~~-----~~~p-------~~~~i~~~l~gnlCRCtg 152 (1332)
T 3unc_A 85 VTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTG 152 (1332)
T ss_dssp EECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHTTTTCCCSSSC
T ss_pred EEEeccccCCCCCcCHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh-----cCCC-------CHHHHHHHHhCCcccCCC
Confidence 9999999975568999999999999999999999999999999965 4666 499999999999999999
Q ss_pred ChhHHHHHHHhhhcccccc---cccccccccCCc-------ccccccCCCCCCCCCCccCCCccccc---ccCCceeecC
Q 000981 173 YRPIADACKSFAADVDIED---LGINSFWAKGES-------KEVKISRLPPYKHNGELCRFPLFLKK---ENSSAMLLDV 239 (1202)
Q Consensus 173 y~~i~~a~~~~~~~~~~~~---~~~~~c~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~~l~~---~~~~~~~~~~ 239 (1202)
|++|++|++.++.+.++|. .+..||.++... ..+..+.+++|+|+++. ||||+|+. ....++.+.+
T Consensus 153 y~~i~~a~~~~~~~~~~c~~~~~g~~cc~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifpp~L~~~~~~~~~~l~~~~ 231 (1332)
T 3unc_A 153 YRPILQGFRTFAKNGGCCGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEP-IFPPELLRLKDVPPKQLRFEG 231 (1332)
T ss_dssp SHHHHHHHGGGC----------------------------CCSCCGGGSCCCCGGGSC-CCCHHHHHHTTSCCCCEEEEC
T ss_pred chhHHHHHHHHhhcCCcccccccCCccccccccccccccccccccccccCCCCccccc-cCCHHHhhhccccCCceEecC
Confidence 9999999999998765442 333344332211 12345678899999865 99999982 3345677777
Q ss_pred -CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE-eeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHH
Q 000981 240 -KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 316 (1202)
Q Consensus 240 -~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 316 (1202)
+++|++|+||+||+++|++ ++++++|+|||+|++ +|.+ ..++.+|||++|+||+.|+.++++|+|||+|||+
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~-----~~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CceEEEccCCHHHHHHHHhh-----CCCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 8999999999999999994 689999999999999 4433 6789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEE
Q 000981 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL 396 (1202)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~v 396 (1202)
+|++.+++.+.+++.+..+.+|.|++++++|||+||||+||||||||+++|+ ||++|+|+||||+|+|.+.+|+|+|
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~---sD~~~~LlAl~A~v~l~~~~G~R~i 383 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTV 383 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTT---CSSHHHHHHTTCEEEEEETTEEEEE
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCc---hhHHHHHHHcCCEEEEEeCCCcEEE
Confidence 9999887776556666678899999999999999999999999999999998 9999999999999999999999999
Q ss_pred ehhh-hhc---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCce
Q 000981 397 MLEE-FLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1202)
Q Consensus 397 pl~d-F~~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~ 472 (1202)
|++| ||. ++.|+++|||++|+||.+.. +.++.+||+++| +++|||+||+||.++++++ +++
T Consensus 384 pl~d~Ff~g~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~A~V~~A~~v~~~~~----~~~ 448 (1332)
T 3unc_A 384 PMDHTFFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQPG----SMQ 448 (1332)
T ss_dssp ECCGGGCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEESTT----SSB
T ss_pred EhHHhhhhccccccCCCCcEEEEEEecCCCC----------CcceEEEEEecC-CCCCcceEEEEEEEEEcCC----CCe
Confidence 9999 997 68999999999999998865 567889999999 7999999999999999742 379
Q ss_pred eeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC-CCCCC-CcHHHHhHhHHHHHHHHHHHHhhhc
Q 000981 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1202)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~-p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1202)
|+++||+||||+++ |+|++++|++|.||+|+++++++|++.+.+++. |.++. +|++||++|+.+||+|||+++.+++
T Consensus 449 i~~~rIa~Ggva~~-p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~ 527 (1332)
T 3unc_A 449 VKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL 527 (1332)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCc-cccHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcccccCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999 999999999999999999999999999999996 56665 8999999999999999999999987
Q ss_pred cCCCccccCCCCCCCCcccccccccccccccccccccCCccccccc----cCCCCCCCCCccccccccccCccceecccc
Q 000981 551 NGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQ----LSREYYPVGEPITKSGAALQASGEAIYVDD 626 (1202)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~----~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~D 626 (1202)
+.. +. .+.+.+++. +.| +...+++|+|+|.|.|+ +.+++++|||+++|+|++.||||+|+|++|
T Consensus 528 ~~~-~~--~~~~~~~~~-------~~s--~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~D 595 (1332)
T 3unc_A 528 GKD-SK--DKCGKLDPT-------YTS--ATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDD 595 (1332)
T ss_dssp CC-----------CCTT-------TGG--GGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGG
T ss_pred ccc-cc--cccCCCChh-------hcc--ccccccCCCCCceeeeecccccccccCcCCCCCcCcchHHhcccccccccc
Confidence 431 10 011112211 112 34678999999999998 467889999999999999999999999999
Q ss_pred CCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCcccCCCcccccCCceeecCCeEEEEE
Q 000981 627 IPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVV 706 (1202)
Q Consensus 627 i~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VV 706 (1202)
++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|.. . ...++|+|++++|||+|||||+||
T Consensus 596 i~~~pgmL~a~~vrSp~aha~I~sID~s~A~~~pGV~~V~t~~Dip--~~~~~-g-~~~d~~~la~~~Vry~GqpVa~Vv 671 (1332)
T 3unc_A 596 IPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNET-G-LFNDETVFAKDTVTCVGHIIGAVV 671 (1332)
T ss_dssp SCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEE-S-TTSCEESSCCSEECSTTCEEEEEE
T ss_pred cCCCCCcEEEEEEeCCCCCeeEeeechHHHhcCCCEEEEEeccccC--CcccC-C-CCCCcccccCceEEEcCCeEEEEE
Confidence 9745899999999999999999999999999999999999999999 54421 1 346899999999999999999999
Q ss_pred eCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCCcccCCccccCCCCCcccccccCCEeEEEEEEEeCcccCCCc
Q 000981 707 ADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYM 786 (1202)
Q Consensus 707 Aet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~af~~a~~vvve~~~~~~~q~H~~m 786 (1202)
|+|+|+|++|+++|+|+| |++ |+++|+++|+++++++... ....+||++++|++|+++ ||++|++++|+|+||
T Consensus 672 A~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~A~~~~~~~~~~---~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~H~~m 744 (1332)
T 3unc_A 672 ADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGSE---LKIEKGDLKKGFSEADNV-VSGELYIGGQDHFYL 744 (1332)
T ss_dssp ESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEEE---EEEEESCHHHHHHHCSEE-EEEEEEECCBCCCCS
T ss_pred ECCHHHHHHHhhcCceEE--EcC-CCcCCHHHHhhccCccCCc---cccccCCHhHHhhcCCeE-eeeeEEeCCccccCC
Confidence 999999999999999999 888 9999999999988754211 135789999999999996 999999999999999
Q ss_pred CCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEE
Q 000981 787 ETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVR 865 (1202)
Q Consensus 787 Ep~~avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVk 865 (1202)
||++|+|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++|||||
T Consensus 745 Ep~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVk 824 (1332)
T 3unc_A 745 ETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVR 824 (1332)
T ss_dssp SCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEE
T ss_pred CCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHhCCCchhEEEEeCCCCCCCCCCCcccchHHHHHHHHHHHhCCCEE
Confidence 9999999998 677899999999999999999999999999999999999999999997555668889999999999999
Q ss_pred EEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCCccCcEEEEEEEeecC
Q 000981 866 IYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTN 944 (1202)
Q Consensus 866 l~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN 944 (1202)
|+|||+|+|+++++||++.++||+|+|+||+|+||+++++.|+|+|.+++. ++.+.+.++.++|+|||++++++.|+||
T Consensus 825 ~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN 904 (1332)
T 3unc_A 825 CMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTN 904 (1332)
T ss_dssp EECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECS
T ss_pred EEecHHHHHhhcCCCCceeEEEEEEECCCCcEEEEEEEEEEcCCcCccccHHHHHHHHHhcCCCccCCcEEEEEEEEeCC
Confidence 999999999999999999999999999999999999999999999998765 5555667788999999999999999999
Q ss_pred CCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchh
Q 000981 945 LPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQ 1023 (1202)
Q Consensus 945 ~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~ 1023 (1202)
+|+++||||||.||++|++|++|||+|++|||||+|||++|++++++. ++.|+++++ .+++||++++++++|++
T Consensus 905 ~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~g~~-----t~~g~~~~~~~l~~~l~~~~~~~~~~~ 979 (1332)
T 3unc_A 905 LSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDL-----THFNQRLEGFSVPRCWDECLKSSQYYA 979 (1332)
T ss_dssp SCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCB-----CTTCCBCCSCCHHHHHHHHHHHTTHHH
T ss_pred CCCCCcccCCCcHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCc-----CCCCcccCCCCHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999999999999999999987754 345665544 89999999999999999
Q ss_pred HHHHHHHHhhcCCcceeeeEeeeeeeccccc-----ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhccccc
Q 000981 1024 RTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKC 1098 (1202)
Q Consensus 1024 r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~ 1098 (1202)
|+++++.||+.++|++||+|++++.||+++. +..+.|+|++||+|+|.+|++|||||++|+++||||++|||
T Consensus 980 r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--- 1056 (1332)
T 3unc_A 980 RKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI--- 1056 (1332)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS---
T ss_pred HHHHHHHhhhcCCcceeeEEEEEEEeeeeccCCCCCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCC---
Confidence 9999999999999999999999999988753 47899999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEEcCCCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCce
Q 000981 1099 GGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEA 1178 (1202)
Q Consensus 1099 ~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~~~~~~~elv~~a~~~~v~l 1178 (1202)
|+|+|+|..+||+.+|++++|+|||+++++|.||++||++|++||++++++. ...+|++++..+|..+++|
T Consensus 1057 -----p~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~a~~~~~~l 1127 (1332)
T 3unc_A 1057 -----PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKN----PDGSWEDWVMAAYQDRVSL 1127 (1332)
T ss_dssp -----CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC----TTSCHHHHHHHHHHTTCCC
T ss_pred -----CHHHEEEEcCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHHhhccCCce
Confidence 9999999999999999999999999999999999999999999999999864 3579999999999999999
Q ss_pred EEEEeeecC
Q 000981 1179 LSTEFILFN 1187 (1202)
Q Consensus 1179 ~a~~~~~~~ 1187 (1202)
++++||+..
T Consensus 1128 ~~~~~~~~~ 1136 (1332)
T 3unc_A 1128 STTGFYRTP 1136 (1332)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999999743
No 3
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=1.8e-148 Score=1419.60 Aligned_cols=719 Identities=24% Similarity=0.310 Sum_probs=631.9
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccc-cC
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g 90 (1202)
++|+|+|||+.++++ ++|+++|||+||++++|||||.||++|.||||||+| ||++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~g~CGaCtv~v----------dg~~~~sC~~~~~~~~~g 70 (907)
T 1vlb_A 2 IQKVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVIL----------DGKVVRACVTKMKRVADG 70 (907)
T ss_dssp EEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCChHHHHHHHhcCCCeecCCCCCCCcCccEEEE----------CCeEeechHhHHHHHcCC
Confidence 369999999999997 899999999999999999999999999999999999 799999999999999 99
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHh--CCcc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLC 168 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~--gnlC 168 (1202)
++|+|||||++ .+.|||||+||+++|++|||||||||||++++||+ +||+| |++||+++|+ ||||
T Consensus 71 ~~i~Tiegl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~-----~~~~p-------~~~~i~~~~~~~gn~c 137 (907)
T 1vlb_A 71 AQITTIEGVGQ-PENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLD-----TNADP-------SREDVRDWFQKHRNAC 137 (907)
T ss_dssp CEEECHHHHCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHT-----TCSSC-------CHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCCC-CcCcCHHHHHHHHcCCCCCCcChHHHHHHHHHHHH-----cCCCC-------CHHHHHHHHHhcCCCc
Confidence 99999999985 57899999999999999999999999999999994 45666 4999999999 9999
Q ss_pred ccCCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCCccCCCcccccccCCceeecCCceEEecCC
Q 000981 169 RCTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPIS 248 (1202)
Q Consensus 169 RCtgy~~i~~a~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~s 248 (1202)
|||||++|++|++.++..
T Consensus 138 RctgY~~i~~a~~~aa~~-------------------------------------------------------------- 155 (907)
T 1vlb_A 138 RCTGYKPLVDAVMDAAAV-------------------------------------------------------------- 155 (907)
T ss_dssp SSSCSHHHHHHHHHHHHH--------------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHh--------------------------------------------------------------
Confidence 999999999999864310
Q ss_pred HHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHHHHHHHhhh
Q 000981 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (1202)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~ 328 (1202)
+. .+
T Consensus 156 -------~~------~~--------------------------------------------------------------- 159 (907)
T 1vlb_A 156 -------IN------GK--------------------------------------------------------------- 159 (907)
T ss_dssp -------HT------TS---------------------------------------------------------------
T ss_pred -------hc------cC---------------------------------------------------------------
Confidence 00 00
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhhcCCCCC
Q 000981 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLD 408 (1202)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~vpl~dF~~~~~l~ 408 (1202)
.
T Consensus 160 -------------------------------------------~------------------------------------ 160 (907)
T 1vlb_A 160 -------------------------------------------K------------------------------------ 160 (907)
T ss_dssp -------------------------------------------S------------------------------------
T ss_pred -------------------------------------------C------------------------------------
Confidence 0
Q ss_pred CCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEeccCCccc
Q 000981 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (1202)
Q Consensus 409 ~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (1202)
++ .. . +
T Consensus 161 -------------~~----------~~--------------------------------------------------~-~ 166 (907)
T 1vlb_A 161 -------------PE----------TD--------------------------------------------------L-E 166 (907)
T ss_dssp -------------CG----------GG--------------------------------------------------G-S
T ss_pred -------------cc----------cc--------------------------------------------------c-c
Confidence 00 00 0 0
Q ss_pred ccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCCCcHHHHhHhHHHHHHHHHHHHhhhccCCCccccCCCCCCCCcc
Q 000981 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (1202)
Q Consensus 489 ~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1202)
+ +
T Consensus 167 -------------------------------------------------------------~-k---------------- 168 (907)
T 1vlb_A 167 -------------------------------------------------------------F-K---------------- 168 (907)
T ss_dssp -------------------------------------------------------------C-C----------------
T ss_pred -------------------------------------------------------------c-c----------------
Confidence 0 0
Q ss_pred cccccccccccccccccccCCccccccccCCCCCCCCCccccccccccCccceeccccC---CCCCCceEEEEEecCCCC
Q 000981 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDI---PSPINCLYGAFIYSTKPL 645 (1202)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di---~~~~gmL~a~~vrSp~ah 645 (1202)
.+.++++|||+++|+|++.||||+++|++|+ . +|||||+++||||++|
T Consensus 169 ----------------------------~p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~-~~gmL~a~~vrSp~ah 219 (907)
T 1vlb_A 169 ----------------------------MPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKM-PAGTLHLAMVQAKVSH 219 (907)
T ss_dssp ----------------------------CCSSCCCTTSCCCCTTHHHHHTTCSCCHHHHHHTS-CTTCEEEEEEECSSSS
T ss_pred ----------------------------CccccccCCCcCccccchhhcCCceeeecccCcCC-CCCCeEEEEEecCCCC
Confidence 0012256999999999999999999999999 6 7999999999999999
Q ss_pred ceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCc------ccCCCcccccCCceeecCCeEEEEEeCCHHHHHHhccc
Q 000981 646 ARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADV 719 (1202)
Q Consensus 646 a~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~------~~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~ 719 (1202)
|+|++||+++|++||||++|+|++|+|......+.. ....++|+|++++|+|+|||||+|||+|+++|++|+++
T Consensus 220 arI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~ 299 (907)
T 1vlb_A 220 ANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEK 299 (907)
T ss_dssp EEEEEEECHHHHTSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTT
T ss_pred eEEEEechhHHhcCCCeEEEEEcccCcccccccCccccccccccCCCchhccCCeEEEcCCeEEEEEECCHHHHHHHhcc
Confidence 999999999999999999999999998311111110 02357899999999999999999999999999999999
Q ss_pred ceEEEecCCCCCcccCHHHHhhcCCC--cccCCcc---ccCCCCCccccc-ccCCEeEEEEEEEeCcccCCCcCCCeEEE
Q 000981 720 AVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---YPKPVGDISKGM-NEADHRILAAEIKLGSQYYFYMETQTALA 793 (1202)
Q Consensus 720 V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~~~---~~~~~Gdv~~af-~~a~~vvve~~~~~~~q~H~~mEp~~avA 793 (1202)
|+|+| |++ |+++|+++|++++++ |+...|+ ....+||++++| ++|+++ ||++|++++|+|+||||++|+|
T Consensus 300 v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A 375 (907)
T 1vlb_A 300 VKVDL--EEL-PAYMSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIFASADVT-VEGDFYVGRQPHMPIEPDVAFA 375 (907)
T ss_dssp CEEEE--EEC-CCCCSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHHHHCSEE-EEEEEEECCCCCCCSSCCEEEE
T ss_pred eEEEE--EcC-CCCCCHHHHHhhcCccccccccccccccccccCChhhhhcccCCeE-EEEEEEECCccccCCCCCeEEE
Confidence 99999 888 999999999998874 3321243 234689999999 999986 9999999999999999999999
Q ss_pred EECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHH
Q 000981 794 VPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTD 873 (1202)
Q Consensus 794 ~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~ed 873 (1202)
+|++||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+.. .++.||++|+++||||||+|||+|+
T Consensus 376 ~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e~ 453 (907)
T 1vlb_A 376 YMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT--SEALVAVAAMATGRPVHLRYNYQQQ 453 (907)
T ss_dssp EECTTSCEEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS--SHHHHHHHHHHHSSCEEEECCHHHH
T ss_pred EEcCCCcEEEEECCcChHHHHHHHHHHhCCChhhEEEEeCcCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEechHHH
Confidence 99976789999999999999999999999999999999999999999998754 3678899999999999999999999
Q ss_pred HhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCCccCcEEEEEEEeecCCCCCCccC
Q 000981 874 MIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMR 952 (1202)
Q Consensus 874 m~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~R 952 (1202)
|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++. ++...+.++.++|+|||++++++.|+||++|++|||
T Consensus 454 ~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~R 533 (907)
T 1vlb_A 454 QQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFR 533 (907)
T ss_dssp HHSSCBCCCEEEEEEEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCT
T ss_pred hhccCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHhccCCCcCCCcEEEEEEEEcCCCCCCcccC
Confidence 9999999999999999999999999999999999999998766 444455677899999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCcccc-CCHHHHHHHHHHhCCchhHHHHHHHH
Q 000981 953 APGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE-YTLPLIWDKLAVSSSFNQRTEMIKEF 1031 (1202)
Q Consensus 953 G~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~-~~~~~~l~~~~~~~~~~~r~~~~~~~ 1031 (1202)
|||.+|++|++|++|||+|++|||||+|||++|++++++.+ +.|..++ .++.+||++++++ |.+|+++.+.|
T Consensus 534 g~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~-----~~g~~~~~~~~~~~l~~~~~~--w~~r~~~~~~~ 606 (907)
T 1vlb_A 534 GYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTN-----PTGQEPEVFSLPDMIDQLRPK--YQAALEKAQKE 606 (907)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcC-----CCCccccCccHHHHHHHHHHH--HHHhhhhhhhc
Confidence 99999999999999999999999999999999999877532 3454433 3799999999999 99887776666
Q ss_pred hhcCCcceeeeEeeeeeeccccc---ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHh---cccccCCCCCCC
Q 000981 1032 NRSNLWRKKGVCRLPIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL---SSIKCGGTGNLL 1105 (1202)
Q Consensus 1032 n~~~~~~~rGia~~~~~~~~~~~---~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~L---gi~~~~~~~~~~ 1105 (1202)
..++| +||+|++++.++.++. ...+.|+|++||+|+|.+|++|||||++|+++||+|++| || |+
T Consensus 607 -~~g~~-~rGiGiA~~~~~~g~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi--------p~ 676 (907)
T 1vlb_A 607 -STATH-KKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGV--------AP 676 (907)
T ss_dssp -CCSSE-EEEEEEEEEEEESSSTTTCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTC--------CG
T ss_pred -cCCCc-eeEEEEEEEEeccccCCCCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCC--------CH
Confidence 45667 6788888888887643 478999999999999999999999999999999999999 99 99
Q ss_pred CcEEEEcCCCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCceEEEEeee
Q 000981 1106 EKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEALSTEFIL 1185 (1202)
Q Consensus 1106 e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~~~~~~~elv~~a~~~~v~l~a~~~~~ 1185 (1202)
|+|+|..+||+.+|++++|+|||++++.|.||++||++||+||+++|+++ ++|+|++..++ .++++++|.
T Consensus 677 ~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~------l~~~el~~~~~----~~~~~~~~~ 746 (907)
T 1vlb_A 677 EKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGY------YTYDELKAADK----PTKITGNWT 746 (907)
T ss_dssp GGEEECCCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHBCTTSSB------CCHHHHHHTTC----CCEEEEEEE
T ss_pred HHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCHHHHHhhcc----cccccceec
Confidence 99999999999999999999999999999999999999999999988743 59999998653 444555544
No 4
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=1.9e-147 Score=1410.15 Aligned_cols=707 Identities=24% Similarity=0.324 Sum_probs=622.9
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccc-cC
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g 90 (1202)
++|+|+|||+.++++ ++|+++|||+||++++|||||.||++|.||||||+| ||++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~G~CGaCtv~v----------dg~~v~sC~~~~~~~~~g 70 (907)
T 1dgj_A 2 ETKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVIL----------DGKVVRACIIKMSRVAEN 70 (907)
T ss_dssp EEEECEETTBCCEEE-ECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCccCCCCCCCCcCceEEEE----------CCeEeehhHhHHHHHcCC
Confidence 369999999999997 899999999999999999999999999999999999 799999999999999 99
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHh--CCcc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLC 168 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~--gnlC 168 (1202)
++|+|||||++ ++.|||||+||+++|++|||||||||||++++||++ ||+| |++||+++|+ ||||
T Consensus 71 ~~i~TiEgl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~-----~~~p-------~~~~i~~~~~~~gnlc 137 (907)
T 1dgj_A 71 ASVTTLEGIGA-PDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDE-----NVAP-------SREDVRDWFQKHHNIC 137 (907)
T ss_dssp CEEECGGGTCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCCC-CcccCHHHHHHHHcCCCCCCcChhHHHHHHHHHHhc-----CCCC-------CHHHHHHHHHhcCCCc
Confidence 99999999986 578999999999999999999999999999999954 4666 4999999999 9999
Q ss_pred ccCCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCCccCCCcccccccCCceeecCCceEEecCC
Q 000981 169 RCTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPIS 248 (1202)
Q Consensus 169 RCtgy~~i~~a~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~s 248 (1202)
|||||++|++|++.++..
T Consensus 138 RctgY~~i~~a~~~aa~~-------------------------------------------------------------- 155 (907)
T 1dgj_A 138 RCTGYKPLVDAVMDAAAI-------------------------------------------------------------- 155 (907)
T ss_dssp SSSCSHHHHHHHHHHHHH--------------------------------------------------------------
T ss_pred ccccHHHHHHHHHHHHHh--------------------------------------------------------------
Confidence 999999999999864310
Q ss_pred HHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHHHHHHHhhh
Q 000981 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (1202)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~ 328 (1202)
++ .+ .
T Consensus 156 -------~~------~~----------------------------~---------------------------------- 160 (907)
T 1dgj_A 156 -------LR------GE----------------------------K---------------------------------- 160 (907)
T ss_dssp -------HT------TS----------------------------S----------------------------------
T ss_pred -------hc------cC----------------------------C----------------------------------
Confidence 00 00 0
Q ss_pred hhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhhcCCCCC
Q 000981 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLD 408 (1202)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~vpl~dF~~~~~l~ 408 (1202)
+. .+ |
T Consensus 161 --------------------------------------~~---~~---------------------------~------- 165 (907)
T 1dgj_A 161 --------------------------------------TV---EE---------------------------I------- 165 (907)
T ss_dssp --------------------------------------CH---HH---------------------------H-------
T ss_pred --------------------------------------Ch---hh---------------------------h-------
Confidence 00 00 0
Q ss_pred CCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEeccCCccc
Q 000981 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (1202)
Q Consensus 409 ~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (1202)
+
T Consensus 166 -------------------------------------------------------------------------------~ 166 (907)
T 1dgj_A 166 -------------------------------------------------------------------------------S 166 (907)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCCCcHHHHhHhHHHHHHHHHHHHhhhccCCCccccCCCCCCCCcc
Q 000981 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (1202)
Q Consensus 489 ~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1202)
+ +
T Consensus 167 -------------------------------------------------------------~-k---------------- 168 (907)
T 1dgj_A 167 -------------------------------------------------------------F-K---------------- 168 (907)
T ss_dssp -------------------------------------------------------------C-C----------------
T ss_pred -------------------------------------------------------------c-c----------------
Confidence 0 0
Q ss_pred cccccccccccccccccccCCccccccccCCCCCCCCCccccccccccCccceecccc--CCCCCCceEEEEEecCCCCc
Q 000981 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDD--IPSPINCLYGAFIYSTKPLA 646 (1202)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~iGk~~~r~d~~~kvtG~a~Y~~D--i~~~~gmL~a~~vrSp~aha 646 (1202)
.+.++++|||+++|+|++.||||+++|++| ++.+|||||+++||||++||
T Consensus 169 ----------------------------~p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aha 220 (907)
T 1dgj_A 169 ----------------------------MPADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHA 220 (907)
T ss_dssp ----------------------------CCTTCCCTTSCCCCTTHHHHHHTCCCBHHHHGGGSCTTCEEEEEEECSSSSE
T ss_pred ----------------------------CcccccccCCCCCCcchhhhcCCceEeecCcCccCCCCCeEEEEEecCCCCE
Confidence 001124699999999999999999999999 83379999999999999999
Q ss_pred eeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCc------ccCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccc
Q 000981 647 RIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVA 720 (1202)
Q Consensus 647 ~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~------~~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V 720 (1202)
+|++||+++|++||||++|+|++|+|......+.. ....++|+|++++|+|+|||||+|||+|+++|++|+++|
T Consensus 221 rI~sID~s~A~~~PGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v 300 (907)
T 1dgj_A 221 LIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKV 300 (907)
T ss_dssp EEEEEECHHHHHSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTC
T ss_pred EEEeCChHHHhcCCCcEEEEEcccCCccccccCccccccccccCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhccc
Confidence 99999999999999999999999998311111110 023578999999999999999999999999999999999
Q ss_pred eEEEecCCCCCcccCHHHHhhcCCC--cccCCcc---ccCCCCCccccc--ccCCEeEEEEEEEeCcccCCCcCCCeEEE
Q 000981 721 VVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---YPKPVGDISKGM--NEADHRILAAEIKLGSQYYFYMETQTALA 793 (1202)
Q Consensus 721 ~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~~~---~~~~~Gdv~~af--~~a~~vvve~~~~~~~q~H~~mEp~~avA 793 (1202)
+|+| |++ |+++|+++|++++++ |+...|+ ....+||++++| ++|+++ ||++|++++|+|+||||++|+|
T Consensus 301 ~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A 376 (907)
T 1dgj_A 301 KFDL--ELL-PEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVV-AEGSYYTQRQPHLPIEPDVGYG 376 (907)
T ss_dssp EEEE--EEC-CCCCSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEE-EEEEEEECCCCCCCSSCCEEEE
T ss_pred EEEE--EcC-CCCCCHHHHHhhcCcccccccccccceeccccCChhhhhcccCCCEE-EEEEEEECCccccCCCCCeEEE
Confidence 9999 888 999999999998874 4321232 234689999999 999986 9999999999999999999999
Q ss_pred EECCCCcEEEEeCCCChHHHHHHHHHHhCCC-CccEEEEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHH
Q 000981 794 VPDEDNCLVVYSSIQCPESAHATIARCLGIP-EHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKT 872 (1202)
Q Consensus 794 ~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp-~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~e 872 (1202)
+|++||+|+||+|||+|+.+|..||++|||| ++||||+++++|||||+|.+.. .++.||++|+++||||||+|||+|
T Consensus 377 ~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e 454 (907)
T 1dgj_A 377 YINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT--MEALVGVAVMATGRPCHLRYNYEQ 454 (907)
T ss_dssp EECTTSCEEEEECCSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS--SHHHHHHHHHHHCSCEEEECCHHH
T ss_pred EEcCCCcEEEEECCcCHHHHHHHHHHHhCCCCCccEEEEeCCCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEeehHH
Confidence 9997678999999999999999999999999 9999999999999999998754 367889999999999999999999
Q ss_pred HHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCCccCcEEEEEEEeecCCCCCCcc
Q 000981 873 DMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAM 951 (1202)
Q Consensus 873 dm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~ 951 (1202)
+|..+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++. ++...+.++.++|+|||++++++.|+||++|++||
T Consensus 455 ~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~ 534 (907)
T 1dgj_A 455 QQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAF 534 (907)
T ss_dssp HHHSSCBCCCEEEEEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCCC
T ss_pred HhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHHhcCCCcCCCcEEEEEEEEcCCCCCCccc
Confidence 99999999999999999999999999999999999999998766 44445566789999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHH
Q 000981 952 RAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKE 1030 (1202)
Q Consensus 952 RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~ 1030 (1202)
||||.||++|++|++|||+|++|||||+|||++|++++++.+ +.|..++. ++.+||++++++ |.+|+++.+.
T Consensus 535 Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~-----~~g~~~~s~~~~~~l~~~~~~--w~~r~~~~~~ 607 (907)
T 1dgj_A 535 RGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTT-----SSGQIPEVMSLPEMFDKMRPY--YEESKKRVKE 607 (907)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcC-----CCCccccCccHHHHHHHHHHH--HHhhhhhhhc
Confidence 999999999999999999999999999999999999877542 34544333 799999999999 9887766655
Q ss_pred HhhcCCcceeeeEeeeeeeccccc---ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHh---cccccCCCCCC
Q 000981 1031 FNRSNLWRKKGVCRLPIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL---SSIKCGGTGNL 1104 (1202)
Q Consensus 1031 ~n~~~~~~~rGia~~~~~~~~~~~---~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~L---gi~~~~~~~~~ 1104 (1202)
| ..++| +||+|++++.++.++. ...+.|+|++||+|+|.+|++|||||++|+++||+|++| || |
T Consensus 608 ~-~~g~~-~rG~Gia~~~~~~g~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi--------p 677 (907)
T 1dgj_A 608 R-STAEI-KRGVGVALGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGI--------T 677 (907)
T ss_dssp T-CCSSE-EEEEEEEEEEEEESSSSSCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTC--------C
T ss_pred c-cCCCe-eEEEEEEEEEecccCCCCCCccEEEEEeCCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCC--------C
Confidence 5 34666 6788888777776643 478999999999999999999999999999999999999 99 9
Q ss_pred CCcEEEEcCCCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHH
Q 000981 1105 LEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLI 1168 (1202)
Q Consensus 1105 ~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~~~~~~~elv 1168 (1202)
+|+|+|..+||+.+|++++|+|||++++.|.||++||++||+||+++++++ ++|+||.
T Consensus 678 ~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~------l~~~~l~ 735 (907)
T 1dgj_A 678 PENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGF------FTPAEMK 735 (907)
T ss_dssp GGGEEEEESBTTTSCCCCCSCTTCTTTHHHHHHHHHHHHHHHHTBCSSSSB------CCHHHHH
T ss_pred HHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCHHHHh
Confidence 999999999999999999999999999999999999999999999988754 3799998
No 5
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=6.9e-118 Score=1118.81 Aligned_cols=558 Identities=34% Similarity=0.553 Sum_probs=515.0
Q ss_pred CCCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCc
Q 000981 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (1202)
Q Consensus 602 ~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (1202)
++|||+++|+|++.||||+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|.. .
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~~-g 77 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNET-G 77 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEE-S
T ss_pred CCCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEECCCCCeEEEEeehHHHhcCCCeEEEEEcCCCC--ccccC-C
Confidence 47999999999999999999999999745899999999999999999999999999999999999999999 54421 1
Q ss_pred ccCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCCcccCCccccCCCCCcc
Q 000981 682 TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDIS 761 (1202)
Q Consensus 682 ~~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~ 761 (1202)
...++|+|++++|||+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++... . ....+||++
T Consensus 78 -~~~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~a~~~~~~~~~-~--~~~~~Gd~~ 150 (755)
T 3nvz_C 78 -LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGS-E--LKIEKGDLK 150 (755)
T ss_dssp -TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEE-E--EEEEESCHH
T ss_pred -CCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccceEE--EcC-CCCCCHHHHhhccCccCC-C--cccccCCHh
Confidence 346899999999999999999999999999999999999999 888 899999999998764321 1 135789999
Q ss_pred cccccCCEeEEEEEEEeCcccCCCcCCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCC
Q 000981 762 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840 (1202)
Q Consensus 762 ~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG 840 (1202)
++|++|+++ ||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||
T Consensus 151 ~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG 229 (755)
T 3nvz_C 151 KGFSEADNV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFG 229 (755)
T ss_dssp HHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTT
T ss_pred HHhhcCCeE-EEEEEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHHCCCCccEEEEECCCCCCCC
Confidence 999999996 9999999999999999999999998 67789999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chh
Q 000981 841 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMP 919 (1202)
Q Consensus 841 gK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~ 919 (1202)
+|.......+++||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+||+++++.|+|+|.+++. ++.
T Consensus 230 ~K~~~~~~~~~~aa~aA~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~ 309 (755)
T 3nvz_C 230 GKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIME 309 (755)
T ss_dssp TTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHHHH
T ss_pred CcccccchHHHHHHHHHHHhCCCEEEEecHHHHHhhcCCCCceEEEEEEEECCCCcEEEEEEEEEEccCcCcCccHHHHH
Confidence 9987544567889999999999999999999999999999999999999999999999999999999999998764 445
Q ss_pred hhccccCCCCccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccC
Q 000981 920 SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESS 999 (1202)
Q Consensus 920 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~ 999 (1202)
..+.++.++|+|||++++++.|+||+|+++||||||.+|++|++|++|||+|++|||||+|||++|++++++. ++
T Consensus 310 ~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~-----~~ 384 (755)
T 3nvz_C 310 RALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDL-----TH 384 (755)
T ss_dssp HHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCB-----CT
T ss_pred HHHHhcCCCccCCcEEEEEEEEeCCCCCCCcccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCc-----CC
Confidence 5666778999999999999999999999999999999999999999999999999999999999999997653 34
Q ss_pred CCccccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCcceeeeEeeeeeeccccc-----ccceEEEEeeCCcEEEEEC
Q 000981 1000 AGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVG 1073 (1202)
Q Consensus 1000 ~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~i~~DGsV~V~~g 1073 (1202)
+|.++++ .+++||++++++++|++|+++++.||+.++|++||+|++++.+++++. +..+.|+|++||+|+|.+|
T Consensus 385 ~g~~~~s~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DG~v~v~~g 464 (755)
T 3nvz_C 385 FNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHG 464 (755)
T ss_dssp TCCBCTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEES
T ss_pred CCccccCCCHHHHHHHHHHhcCHHHHHHHHHhhhccCCccceeEEEEEEEecccccCCCCCcceEEEEEecCCeEEEEEC
Confidence 5665544 899999999999999999999999999999999999999988887753 4789999999999999999
Q ss_pred CcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000981 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRE 1153 (1202)
Q Consensus 1074 ~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~ 1153 (1202)
++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||+|.++|.||++||++||+||+++++
T Consensus 465 ~~e~GQG~~T~~aQiaAe~Lgi--------~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa 536 (755)
T 3nvz_C 465 GTEMGQGLHTKMVQVASKALKI--------PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKK 536 (755)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTS--------CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999998
Q ss_pred HHhCCCCCCCHHHHHHHHHhCCCceEEEEeeecC
Q 000981 1154 RLQGQMGNVEWETLIQQVHICSSEALSTEFILFN 1187 (1202)
Q Consensus 1154 ~~~~~~~~~~~~elv~~a~~~~v~l~a~~~~~~~ 1187 (1202)
+. ...+|++++..+|..+++|++++||...
T Consensus 537 ~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 566 (755)
T 3nvz_C 537 KN----PDGSWEDWVMAAYQDRVSLSTTGFYRTP 566 (755)
T ss_dssp HC----TTSCHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred hC----CCCCHHHHHHHhhccccceEEEEEEecC
Confidence 64 3579999999999999999999999743
No 6
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=1.2e-115 Score=1103.02 Aligned_cols=563 Identities=31% Similarity=0.441 Sum_probs=514.7
Q ss_pred CCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCcc
Q 000981 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKT 682 (1202)
Q Consensus 603 ~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~ 682 (1202)
+|||+++|+|++.||||+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|. ...
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~-~g~ 78 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLP--HDND-ASP 78 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCS--SCCC-CCS
T ss_pred CCCCCCCCcchHHhccccceeccccCCCCCCEEEEEEECCCCCeEEEEeEhHHHhcCCCcEEEEEcccCC--Cccc-CCC
Confidence 5899999999999999999999999547999999999999999999999999999999999999999999 4332 112
Q ss_pred cCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCCcccCCccccCCCCCccc
Q 000981 683 IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISK 762 (1202)
Q Consensus 683 ~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~ 762 (1202)
...++|+|++++|+|+||||++|||+|+|+|++|+++|+|+| |++ |+++|+++|++++....... ....+||+++
T Consensus 79 ~~~~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~y--e~l-p~v~~~~~a~~~~~~~~~~~--~~~~~Gd~~~ 153 (777)
T 2w3s_B 79 APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITY--APR-PAILTLDQALAADSRFEGGP--VIWARGDVET 153 (777)
T ss_dssp SSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHHTCBSSSSC--EEEEESCHHH
T ss_pred CCCCcccccCceEEecCCeEEEEEECCHHHHHHHhcceEEEE--EcC-CCCCCHHHHhhccCccccCc--cccccCChhH
Confidence 346899999999999999999999999999999999999999 888 99999999998854211111 1346899999
Q ss_pred ccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCC
Q 000981 763 GMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGK 842 (1202)
Q Consensus 763 af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK 842 (1202)
+|++|+++ ||++|++++|+|+||||++|+|+|++|+ |+||+|||+|+.+|..||++||||++||||+++++|||||+|
T Consensus 154 a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~-l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K 231 (777)
T 2w3s_B 154 ALAGAAHL-AEGCFEIGGQEHFYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGK 231 (777)
T ss_dssp HHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEEETTE-EEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTT
T ss_pred HhhcCCeE-EEEEEEECCccccCCcCCeEEEEEECCc-cEEEECCcCHHHHHHHHHHHHCCCHHHEEEEeCCCCCCCCcC
Confidence 99999996 9999999999999999999999999776 999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhh
Q 000981 843 AIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSN 921 (1202)
Q Consensus 843 ~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~ 921 (1202)
.+...+.++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+++. ++...
T Consensus 232 ~~~~~~~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~ 311 (777)
T 2w3s_B 232 ESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRA 311 (777)
T ss_dssp TTTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCCCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchhHHHHH
Confidence 87556678899999999999999999999999999999999999999999999999999999999999988765 44556
Q ss_pred ccccCCCCccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCC------------
Q 000981 922 MIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTH------------ 989 (1202)
Q Consensus 922 ~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~------------ 989 (1202)
+.++.++|+|||++++++.|+||+++++||||||.+|++|++|++|||+|++|||||+|||++|++++
T Consensus 312 ~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~~~~~~~ 391 (777)
T 2w3s_B 312 MLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSP 391 (777)
T ss_dssp HHTTTTTBCCSSEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTBCCCC-----------
T ss_pred HHhcCCccccCCEEEEEEEEeCCCCCCCccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhccCccccccccccccc
Confidence 66778999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ------CCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCcceeeeEeeeeeeccccc-----ccc
Q 000981 990 ------KSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STP 1057 (1202)
Q Consensus 990 ------~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~ 1057 (1202)
++ |+.++.|..+++ ++.+||+++++.++|++|+++++.||+.++|++||+||++..|+.++. ...
T Consensus 392 ~~~~~~~~---p~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~ 468 (777)
T 2w3s_B 392 PEPIATKK---TQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAG 468 (777)
T ss_dssp ------CC---CCBCTTCCBCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHTCSSEEEEEEEEEEEEECSCSSGGGCEEE
T ss_pred ccccCCCC---CccCCCCccccCCCHHHHHHHHHHhcCHHHHHHHHHHhhcCCCCeeEEEEEEEeeEccccccccCCCCc
Confidence 52 234456665544 799999999999999999888889999888889999999999988753 478
Q ss_pred eEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccccCCccCccchHHHHHHHHH
Q 000981 1058 GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVV 1137 (1202)
Q Consensus 1058 a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av 1137 (1202)
+.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||+++++|.||
T Consensus 469 a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av 540 (777)
T 2w3s_B 469 ALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGI--------DPVQVRITATDTSKVPNTSATAASSGADMNGMAV 540 (777)
T ss_dssp EEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHH
T ss_pred eEEEEccCCeEEEEECCccCCCChhHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCCCCCCccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC---------------CCCCHHHHHHHHHhCCCceEEEEeeec
Q 000981 1138 RDCCNILVERLTLLRERLQGQM---------------GNVEWETLIQQVHICSSEALSTEFILF 1186 (1202)
Q Consensus 1138 ~~Ac~~l~~~l~~~a~~~~~~~---------------~~~~~~elv~~a~~~~v~l~a~~~~~~ 1186 (1202)
++||++||+||+++++++++.. +.++|.||+..+|..+++|++++||..
T Consensus 541 ~~Aa~~l~~~l~~~aa~~~~~~~~~l~~~~g~v~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~ 604 (777)
T 2w3s_B 541 KDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYAT 604 (777)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCEEETTEEEETTEEEEHHHHHHHHHHTTCCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCcccHHHHHHHhhhcCcceEEEEEEeC
Confidence 9999999999999999887421 247999999999999999999999975
No 7
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=2.1e-113 Score=1082.89 Aligned_cols=558 Identities=22% Similarity=0.254 Sum_probs=499.1
Q ss_pred CCCCCCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCC
Q 000981 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678 (1202)
Q Consensus 599 ~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~ 678 (1202)
.++++|||+++|+|++.||||+++|++|+. +|||||+++||||++||+|++||+++|++||||++|+|++|+| + |.
T Consensus 6 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip--~-~~ 81 (769)
T 1rm6_A 6 PQHGTVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--V-PF 81 (769)
T ss_dssp ---CCTTSCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCC--S-CB
T ss_pred cccCcCCCCCcCcchHHhccceeeehhccC-CCCCEEEEEEECCCCCeEEEeeehhHHhcCCCeEEEEehHHcC--C-cc
Confidence 457889999999999999999999999996 7999999999999999999999999999999999999999999 3 33
Q ss_pred CCcccCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCC--ccc-CCcc---
Q 000981 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PSFL--- 752 (1202)
Q Consensus 679 ~~~~~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~-~~~~--- 752 (1202)
+......++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |++ |+++|+++|++++++ |+. +.|+
T Consensus 82 g~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~~~~~al~~~a~~~~~~~~~n~~~~ 158 (769)
T 1rm6_A 82 GVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDY--EVL-PAYMTPKAAMKAGAIALHDDKPNNILRE 158 (769)
T ss_dssp CSSTTCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCSHHHHHSTTCCCSSTTCTTSEEEE
T ss_pred CCCCCCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCCCCHHHHhccCCceeccCCCCccccc
Confidence 2111146889999999999999999999999999999999999999 888 999999999998874 432 1343
Q ss_pred ccCCCCCcccccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEE
Q 000981 753 YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVI 831 (1202)
Q Consensus 753 ~~~~~Gdv~~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~ 831 (1202)
....+||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++||||+
T Consensus 159 ~~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~ 237 (769)
T 1rm6_A 159 VHAEFGDVAAAFAEADLI-REKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVI 237 (769)
T ss_dssp EEEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccCChhhhhccCCEE-EEEEEEECCccccCCCCceEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHEEEE
Confidence 234689999999999996 99999999999999999999999986 6799999999999999999999999999999999
Q ss_pred EcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCC
Q 000981 832 TRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLS 911 (1202)
Q Consensus 832 ~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~ 911 (1202)
++++|||||+|..... .++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|
T Consensus 238 ~~~vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay 316 (769)
T 1rm6_A 238 KPFLGGGFGARTEALH-FEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAY 316 (769)
T ss_dssp CCBCCCCTTTTSSCCH-HHHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEEEEEEEECTTSCEEEEEEEEEEECCSS
T ss_pred eCCCCCCCCCcccccc-HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCEEEEEEEEECCCCeEEEEEEEEEEeCCcC
Confidence 9999999999987432 478899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-chhhhccccCCCCccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCC
Q 000981 912 PDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHK 990 (1202)
Q Consensus 912 ~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~ 990 (1202)
.+++. ++...+.++.++|+|||++++++.|+||++|++||||||.||++|++|++||++|++|||||+|||++|+++++
T Consensus 317 ~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~ 396 (769)
T 1rm6_A 317 AGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQI 396 (769)
T ss_dssp CTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHTBCSSS
T ss_pred cccchHHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCccccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCC
Confidence 98766 44445567789999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCcceeeeEeeeeeeccccc---------ccceEE
Q 000981 991 SLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR---------STPGKV 1060 (1202)
Q Consensus 991 ~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~---------~~~a~V 1060 (1202)
+.. ++.|..+++ ++.+||++++++++|.+|+++. .+| ||+|++++.++.++. ...+.|
T Consensus 397 ~~~----~~~g~~~~s~~~~~~l~~~~~~~~w~~r~~~~------~~g--rG~Gia~~~~~~g~~~~~~~~~~~~~~a~v 464 (769)
T 1rm6_A 397 PYV----TMYAQRVMSYGVPECLEKVKAASGWEERKGKL------PKG--RGLGIALSHFVSGTSTPKHWTGEPHATVNL 464 (769)
T ss_dssp SEE----CTTCCEECCCCHHHHHHHHHHHHTHHHHTTCS------CTT--EEEEEEEEEEESSCSSCSSCCCCCSEEEEE
T ss_pred CCc----CCCCccccCCCHHHHHHHHHHhCCchhhhhhh------ccC--ceEEEEEEEEecccCccccccCCCCccEEE
Confidence 531 345655443 7999999999999998764322 123 677777777776532 378999
Q ss_pred EEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccccCCccCccchHHHHHHHHHHHH
Q 000981 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDC 1140 (1202)
Q Consensus 1061 ~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~A 1140 (1202)
+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||++++.|.||++|
T Consensus 465 ~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgi--------p~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 536 (769)
T 1rm6_A 465 KLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISA 536 (769)
T ss_dssp EECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHH
T ss_pred EEeCCCeEEEEECCccCCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhCCCceEEEEeee
Q 000981 1141 CNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHICSSEALSTEFIL 1185 (1202)
Q Consensus 1141 c~~l~~~l~~~a~~~~~~------------------~~~~~~~elv~~a~~~~v~l~a~~~~~ 1185 (1202)
|++||+||+++|+++|+. ++.++|.|++..+|..+++|.+.++|.
T Consensus 537 a~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~ 599 (769)
T 1rm6_A 537 AEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYT 599 (769)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhhhccccccccccee
Confidence 999999999999988751 234899999999998889999988775
No 8
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=2.7e-113 Score=1084.88 Aligned_cols=578 Identities=19% Similarity=0.200 Sum_probs=510.0
Q ss_pred CCCCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCC
Q 000981 601 YYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGS 680 (1202)
Q Consensus 601 ~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~ 680 (1202)
++.|||+++|+|++.||||+++|++|++ +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.+.+.
T Consensus 15 ~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~ 91 (803)
T 1ffv_B 15 LAGMGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLK--PLKLHW 91 (803)
T ss_dssp HTCTTCCCCCSSHHHHTTTCCCCGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHG--GGTCSE
T ss_pred hccCCCCCcCcChHhhcccceecccccC-CCCCEEEEEEeCCCCCeEEEEeehHHHhcCCCeEEEEehhhcc--Cccccc
Confidence 3569999999999999999999999997 7999999999999999999999999999999999999999998 322211
Q ss_pred cc--cCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCC--Cccc-CC-----
Q 000981 681 KT--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS----- 750 (1202)
Q Consensus 681 ~~--~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~--~~~~-~~----- 750 (1202)
.. ...++++|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 92 ~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~ 168 (803)
T 1ffv_B 92 MPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY--DEL-PVVIDPIDALKPDAPVLREDLAGKTSGA 168 (803)
T ss_dssp EECTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHTSTTCCCSCGGGTTCCEET
T ss_pred ccccCCCccccccCceEEEcCCcEEEEEECCHHHHHHHhcCCEEEE--eeC-CccCCHHHHhhcCCceeccccccccccc
Confidence 10 113678999999999999999999999999999999999999 888 99999999999876 3432 11
Q ss_pred -------cc---ccCCC-CCcccccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHH
Q 000981 751 -------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIA 818 (1202)
Q Consensus 751 -------~~---~~~~~-Gdv~~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA 818 (1202)
|+ ....+ ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||
T Consensus 169 ~~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA 247 (803)
T 1ffv_B 169 HGPREHHNHIFTWGAGDKAATDAVFANAPVT-VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVS 247 (803)
T ss_dssp TEECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHH
T ss_pred ccccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCceEEEEECCCCHHHHHHHHH
Confidence 32 12357 9999999999996 99999999999999999999999985 679999999999999999999
Q ss_pred HHhCCCCccEEEEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEE
Q 000981 819 RCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKIT 898 (1202)
Q Consensus 819 ~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~ 898 (1202)
++||||++||||+++++|||||+|... ....+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+
T Consensus 248 ~~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aa~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~ 326 (803)
T 1ffv_B 248 MLSGIPESKVRIVSPDIGGGFGNKVGI-YPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKIL 326 (803)
T ss_dssp HHHCCCGGGEEEECCCCSCCTTTTSSC-CHHHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEE
T ss_pred HHhCCCHHHEEEEeCCCCCCCCccccc-cHHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCCEE
Confidence 999999999999999999999999864 3445789999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeeCCCCCC-CCc-chhhhccc-cCCCCccCcEEEEEEEeecCCCCCC-ccCCCCh-hHHHHHHHHHHHHHHHH
Q 000981 899 ALQLNILIDAGLSPD-VSP-IMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQGSFIAEAVIEHVAST 973 (1202)
Q Consensus 899 a~~~~~~~d~Ga~~~-~s~-~~~~~~~~-~~~~Y~ipn~~~~~~~v~TN~~~~g-a~RG~G~-~q~~fa~E~~mDelA~~ 973 (1202)
+++++++.|+|+|.+ ++. +..+...+ ..++|+|||++++++.|+||++|++ ||||||. ||++|++|++||++|++
T Consensus 327 a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~g~a~Rg~G~~~q~~fa~E~~mDelA~~ 406 (803)
T 1ffv_B 327 GLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQK 406 (803)
T ss_dssp EEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCcccccccchhHHHHHHhhcCCCccCCcEEEEEEEEEcCCCCCccceeccCCCchhHHHHHHHHHHHHHH
Confidence 999999999999965 666 33323333 4789999999999999999999999 9999999 99999999999999999
Q ss_pred cCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCC-cceeeeEeeeeeecc
Q 000981 974 LSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNL-WRKKGVCRLPIVHEV 1051 (1202)
Q Consensus 974 lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~-~~~rGia~~~~~~~~ 1051 (1202)
|||||+|||++|++++++ ++|.++.|..+++ ++.+||++++++++|++++++.+++|+.++ |++||+|++++.++.
T Consensus 407 lG~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~g~~~~~rGiG~a~~~~~~ 484 (803)
T 1ffv_B 407 LNMDKAEIRAKNFIRKEQ--FPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVV 484 (803)
T ss_dssp HTCCTTHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECCB
T ss_pred HCcCHHHHHHHhCCCCCc--CccccCCCcccCCccHHHHHHHHHHHCCchhHHHHhHhhhccCCCcceEEEEEEEEEEec
Confidence 999999999999998764 2455666776554 899999999999999988777788888888 578999999888876
Q ss_pred ccc------------ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccc
Q 000981 1052 TLR------------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVI 1119 (1202)
Q Consensus 1052 ~~~------------~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p 1119 (1202)
++. ...+.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+|
T Consensus 485 g~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------~~e~V~v~~~DT~~~p 556 (803)
T 1ffv_B 485 GAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGI--------PSEVIQVEEGDTSTAP 556 (803)
T ss_dssp CCCCTTTCEETTEESCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEECCBTTTSC
T ss_pred cccccccccccccCCcccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCC--------CHHHEEEecCCCCCCC
Confidence 643 37899999999999999999999999999999999999999 9999999999999999
Q ss_pred CCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhC---CC--
Q 000981 1120 QGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHIC---SS-- 1176 (1202)
Q Consensus 1120 ~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~------------------~~~~~~~elv~~a~~~---~v-- 1176 (1202)
++++|+|||+|+++|.||++||++||+||+++++++++. ++.++|.|++..+|.. ++
T Consensus 557 ~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~a~~~~~~~~~~ 636 (803)
T 1ffv_B 557 YGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEP 636 (803)
T ss_dssp CCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCCS
T ss_pred CCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEcCCCCCccCHHHHHHHHHhccCccccc
Confidence 999999999999999999999999999999999998741 2347999999988632 23
Q ss_pred ceEEEEeee-----cCcccccceee
Q 000981 1177 EALSTEFIL-----FNFVCQRTCTD 1196 (1202)
Q Consensus 1177 ~l~a~~~~~-----~~~~~~~~~~~ 1196 (1202)
+|+++++|. +.|.++..+++
T Consensus 637 gl~~~~~~~~~~~~~~~ga~~aeVe 661 (803)
T 1ffv_B 637 GLEAVHYYDPPNFTYPFGIYLCVVD 661 (803)
T ss_dssp SEEEEEEECCSSCBCCEEEEEEEEE
T ss_pred ceeeeeeecCCCCCcceeEEEEEEE
Confidence 678888875 23444444444
No 9
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=2.9e-112 Score=1077.54 Aligned_cols=577 Identities=21% Similarity=0.227 Sum_probs=504.7
Q ss_pred CCCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCCCCc
Q 000981 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (1202)
Q Consensus 602 ~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (1202)
+.|||+++|+|++.||||+++|++|++ +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|....
T Consensus 19 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~~ 95 (809)
T 1n62_B 19 QGMGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLK--PLNLHYM 95 (809)
T ss_dssp TCTTCCCCCTHHHHHTTTCCCBGGGCC-CTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHG--GGTCSEE
T ss_pred ccCCCCCcCcchHHhccceeeehhhcC-CCCCEEEEEEeCCCCceEEEecchHHHhhCCCeEEEEEhHHcc--ccccccc
Confidence 359999999999999999999999997 7999999999999999999999999999999999999999998 4432111
Q ss_pred c--cCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCC--Cccc-CC------
Q 000981 682 T--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS------ 750 (1202)
Q Consensus 682 ~--~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~--~~~~-~~------ 750 (1202)
. ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 96 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~~ 172 (809)
T 1n62_B 96 PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVLVDPFKAMEPDAPLLREDIKDKMTGAH 172 (809)
T ss_dssp ECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCGGGTTSTTCCCCCGGGTTCCEETT
T ss_pred cccCCCCcccccCceEEEcCCcEEEEEECCHHHHHHHhCcceEEE--EeC-CCcCCHHHHhhcCCceecccccccccccc
Confidence 1 114678999999999999999999999999999999999999 888 99999999999876 3432 11
Q ss_pred ------cc---ccCCC-CCcccccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHH
Q 000981 751 ------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIAR 819 (1202)
Q Consensus 751 ------~~---~~~~~-Gdv~~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~ 819 (1202)
|+ ....+ ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||+
T Consensus 173 ~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~ 251 (809)
T 1n62_B 173 GARKHHNHIFRWEIGDKEGTDATFAKAEVV-SKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSL 251 (809)
T ss_dssp EECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHH
T ss_pred cccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCCeEEEEECCcChHHHHHHHHH
Confidence 32 12457 9999999999996 99999999999999999999999985 6799999999999999999999
Q ss_pred HhCCCCccEEEEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEE
Q 000981 820 CLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITA 899 (1202)
Q Consensus 820 ~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a 899 (1202)
+||||++||||+++++|||||+|... ....++||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|
T Consensus 252 ~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a 330 (809)
T 1n62_B 252 ISGLPEHKIHVIAPDIGGGFGNKVGA-YSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILA 330 (809)
T ss_dssp HHCCCGGGEEEECCBCSCCTTTTSSC-CHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEE
T ss_pred HhCCCHHHEEEEeCCCCCCCcccccc-chHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCcEEE
Confidence 99999999999999999999999864 34457899999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeeCCCCCC-CCc-chhhhccc-cCCCCccCcEEEEEEEeecCCCCCC-ccCCCCh-hHHHHHHHHHHHHHHHHc
Q 000981 900 LQLNILIDAGLSPD-VSP-IMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQGSFIAEAVIEHVASTL 974 (1202)
Q Consensus 900 ~~~~~~~d~Ga~~~-~s~-~~~~~~~~-~~~~Y~ipn~~~~~~~v~TN~~~~g-a~RG~G~-~q~~fa~E~~mDelA~~l 974 (1202)
++++++.|+|+|.+ ++. +....+.+ ..++|+|||++++++.|+||++|++ ||||||. ||++|++|++||++|++|
T Consensus 331 ~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~g~a~Rg~G~~~q~~fa~E~~mDelA~~l 410 (809)
T 1n62_B 331 MRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRL 410 (809)
T ss_dssp EEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCcCcccccchhhhhhhhhhcCCCcCCCcEEEEEEEEECCCCCCCCEecCCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999965 665 33333233 4789999999999999999999999 9999999 999999999999999999
Q ss_pred CCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHH----HHHhhcCCcceeeeEeeeeee
Q 000981 975 SMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMI----KEFNRSNLWRKKGVCRLPIVH 1049 (1202)
Q Consensus 975 g~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~----~~~n~~~~~~~rGia~~~~~~ 1049 (1202)
||||+|||++|++++++ ++|.++.|..+++ ++.+||++++++++|++++++. ..||...+|++||+|++++.+
T Consensus 411 G~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~fn~g~~~~~rGiGia~~~~ 488 (809)
T 1n62_B 411 EMDSADLRIKNFIQPEQ--FPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTE 488 (809)
T ss_dssp TCCHHHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEC
T ss_pred CcCHHHHHHHhccCCCC--CccccCCCcccCCCCHHHHHHHHHHHcCchhhHHhHHhhhhhhccCCCceeEEEEEEEEEE
Confidence 99999999999998764 2455667776554 8999999999999998643332 357754447788999988777
Q ss_pred ccccc------------ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcc
Q 000981 1050 EVTLR------------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLS 1117 (1202)
Q Consensus 1050 ~~~~~------------~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~ 1117 (1202)
+.++. ...+.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.
T Consensus 489 ~~g~~~~~~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~ 560 (809)
T 1n62_B 489 IVGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGI--------PADDIMIEEGNTDT 560 (809)
T ss_dssp CBSCCCTTTCEETTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEECCBTTT
T ss_pred eecccccccccccccCCcccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCC
Confidence 66533 36799999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------------CCCCHHHHHHHHHhC---CC
Q 000981 1118 VIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQM------------------GNVEWETLIQQVHIC---SS 1176 (1202)
Q Consensus 1118 ~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~------------------~~~~~~elv~~a~~~---~v 1176 (1202)
+|++++|+|||+|+++|.||++||++||+||+++++++++.. +.++|.|++..+|.. ++
T Consensus 561 ~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~ 640 (809)
T 1n62_B 561 APYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNL 640 (809)
T ss_dssp SCCCCCSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTS
T ss_pred CCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccc
Confidence 999999999999999999999999999999999999987521 237999999988633 22
Q ss_pred --ceEEEEeeec-----Ccccccceee
Q 000981 1177 --EALSTEFILF-----NFVCQRTCTD 1196 (1202)
Q Consensus 1177 --~l~a~~~~~~-----~~~~~~~~~~ 1196 (1202)
+|+++++|.. .|.++..+++
T Consensus 641 ~~~l~~~~~~~~~~~~~~~ga~~aeVe 667 (809)
T 1n62_B 641 EPGLEAVNYYDPPNMTYPFGAYFCIMD 667 (809)
T ss_dssp CSSCEEEEEECCSSCBCCEEEEEEEEE
T ss_pred cccceeeeeccCCCCccceeEEEEEEE
Confidence 5799988852 3344444444
No 10
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=5e-112 Score=1072.77 Aligned_cols=548 Identities=21% Similarity=0.229 Sum_probs=486.0
Q ss_pred CCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCC--CCC
Q 000981 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN--IGS 680 (1202)
Q Consensus 603 ~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n--~~~ 680 (1202)
.|||+++|+|++.||||+++|++|+. +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.| .+.
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~ 89 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVA--ELSQGIVA 89 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHH--TTCCCEEE
T ss_pred cCCCCCcCcchHHhCccceecccccC-CCCCEEEEEEecCCCCEEEEEeEhHHHhhCCCeEEEEeHHHCc--ccccccCc
Confidence 69999999999999999999999996 7999999999999999999999999999999999999999998 432 110
Q ss_pred ccc-----CCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCC-Cccc-CCcc-
Q 000981 681 KTI-----FGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS-LFEV-PSFL- 752 (1202)
Q Consensus 681 ~~~-----~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~-~~~~-~~~~- 752 (1202)
... ..+.++|++++|||+|||||+|||+|+++|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.|+
T Consensus 90 ~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~i~~~~~~n~~ 166 (788)
T 1t3q_B 90 TMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY--EEL-PAVTGIEAALEGEARANDTLAGNVV 166 (788)
T ss_dssp CCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHCSCCSCTTSSSSEE
T ss_pred ccccccccCCccccccCCeEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCcCCHHHHhhccCcccCCCCCccc
Confidence 001 12337799999999999999999999999999999999999 888 99999999999886 3432 2343
Q ss_pred --ccCCCCCcccccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEE
Q 000981 753 --YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829 (1202)
Q Consensus 753 --~~~~~Gdv~~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~ 829 (1202)
....+||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++|||
T Consensus 167 ~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~Vr 245 (788)
T 1t3q_B 167 SRTSRARDELAPIFASSAGV-VRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIE 245 (788)
T ss_dssp EEEEEEECCCHHHHHHSSEE-EEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEE
T ss_pred cccccccCChhhhhccCCcE-EEEEEEECCEeccCCCCceEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCChHHEE
Confidence 234689999999999986 99999999999999999999999986 67999999999999999999999999999999
Q ss_pred EEEcccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCC
Q 000981 830 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 909 (1202)
Q Consensus 830 V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 909 (1202)
|+++++|||||+|.+.. ..++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 246 V~~~~vGGgFG~K~~~~-~~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~G 324 (788)
T 1t3q_B 246 VRVPDVGGGFGQKAHLH-PEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGG 324 (788)
T ss_dssp EECCBCSCCTTTTSSCC-HHHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECC
T ss_pred EEeCCCCCCCCCCCccc-hHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCC
Confidence 99999999999998754 33788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCc-chh-hhccccCCCCccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhh
Q 000981 910 LSPD--VSP-IMP-SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNIN 985 (1202)
Q Consensus 910 a~~~--~s~-~~~-~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N 985 (1202)
+|.+ ++. ++. ....++.++|+|||++++++.|+||++|++||||||.||++|++|++||++|++|||||+|||++|
T Consensus 325 ay~~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N 404 (788)
T 1t3q_B 325 AYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRN 404 (788)
T ss_dssp SSCCTTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTT
T ss_pred CCccccccchhHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCCcccCCcHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 9987 666 434 455667899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCch---hHHHHHHHHhhcCCcceeeeEeeeeeeccccc-------
Q 000981 986 LHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFN---QRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR------- 1054 (1202)
Q Consensus 986 l~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~---~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~------- 1054 (1202)
++++++ +||.++.|..+++ ++.+||++++++++|+ +|+++. +..++|+|+|++ ++.++.++.
T Consensus 405 ~~~~~~--~p~~~~~g~~~~s~~~~~~l~~~~~~~~w~~~~~r~~~~---~~~g~~~G~GiA--~~~~~~g~~~~~~~~~ 477 (788)
T 1t3q_B 405 VVMPED--FPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEA---RARGKYLGLGVS--VFNEVTGTGTRTLSFL 477 (788)
T ss_dssp BCCGGG--CSEECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHH---HTTTEEEEEEEE--EEEEEESCCHHHHHHT
T ss_pred cCCCCC--ccccCCCCcccCCCCHHHHHHHHHHhcCCchhhhhhhhh---hccCCeEEEEEE--EEEeccccCccccccc
Confidence 998764 3456677776554 8999999999999998 554433 245556555554 445554421
Q ss_pred ------ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccccCCccCccch
Q 000981 1055 ------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGST 1128 (1202)
Q Consensus 1055 ------~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~ 1128 (1202)
...+.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+ +|++++|+|||
T Consensus 478 ~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~~~V~v~~~DT~-~p~~~~t~aSr 548 (788)
T 1t3q_B 478 GTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGV--------PASDVVIQAGSTK-NTYGFGAYASR 548 (788)
T ss_dssp TCCCCCCBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEEECSBTT-SCCBCCSCTTC
T ss_pred ccccCccccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCC--------CHHHEEEecCCCC-CCCCCCCccch
Confidence 47799999999999999999999999999999999999999 9999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------------CCCCHHHHHHHHHhC
Q 000981 1129 TSEASCQVVRDCCNILVERLTLLRERLQGQM------------------GNVEWETLIQQVHIC 1174 (1202)
Q Consensus 1129 ~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~~------------------~~~~~~elv~~a~~~ 1174 (1202)
++.++|.||++||++||+||+++++++++.. +.++|.|++..+|..
T Consensus 549 ~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~ 612 (788)
T 1t3q_B 549 GAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFA 612 (788)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhc
Confidence 9999999999999999999999999887521 237999999988753
No 11
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=100.00 E-value=3.8e-101 Score=915.09 Aligned_cols=444 Identities=27% Similarity=0.450 Sum_probs=393.8
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCc
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1202)
|+|+|+|||+.+++++++|+++|+|||| +++|||||.||++|+||||||+|+++| ||+++|||++|+.+++|+
T Consensus 1 ~~~~~~vNg~~~~~~~~~~~~~Ll~~Lr-~~~l~g~k~gC~~G~CGaCtV~v~~~~------~g~~v~sCl~~~~~~~g~ 73 (462)
T 2w3s_A 1 MEIAFLLNGETRRVRIEDPTQSLLEWLR-AEGLTGTKEGCNEGDCGACTVMIRDAA------GSRAVNACLMMLPQIAGK 73 (462)
T ss_dssp CEEEEEETTEEEEEECSCTTCBHHHHHH-HTTCTTSCCSCSSSSSCTTEEEEEETT------EEEEEETTTCBGGGGTTC
T ss_pred CcEEEEECCEEEEEecCCCCCcHHHHHH-HcCCCccCCCCCCCCcCCcEEEEEecC------CCeEEEchhhhHHHhCCC
Confidence 5799999999999955899999999999 999999999999999999999999887 689999999999999999
Q ss_pred eEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000981 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1202)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRCt 171 (1202)
+|+|||||++.++.+|||||||+++|++|||||||||||++++|| + | |++||+++|+|||||||
T Consensus 74 ~i~TiEgl~~~~~~~~~~q~a~~~~~~~QCG~CtpG~im~~~~ll-~--------p-------~~~~i~~~l~gnlCRCt 137 (462)
T 2w3s_A 74 ALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAH-D--------R-------DRKDYDDLLAGNLCRCT 137 (462)
T ss_dssp EEECGGGTSCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHH-H--------T-------TCCCHHHHSTTCCCSSS
T ss_pred cEEEECCCCCCCCCCCHHHHHHHHhCCCCCCCCcchHHHHHHHHH-C--------C-------CHHHHHHHHcCCcccCC
Confidence 999999998645789999999999999999999999999999999 2 3 48899999999999999
Q ss_pred CChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCCccCCCcccccccCCceee--cC-CceEEecCC
Q 000981 172 GYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLL--DV-KGSWHSPIS 248 (1202)
Q Consensus 172 gy~~i~~a~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~--~~-~~~~~~P~s 248 (1202)
||++|++|++.++.. .... .| ..+. + .+ ...+.+ .+ ...|++|+|
T Consensus 138 gy~~i~~a~~~~~~~-~~~~----~~--------~~~~---~---~~-------------~~~~~~~~gG~a~~y~~P~s 185 (462)
T 2w3s_A 138 GYAPILRAAEAAAGE-PPAD----WL--------QADA---A---FT-------------LAQLSSGVRGQTAPAFLPET 185 (462)
T ss_dssp CSHHHHHHHHHHHTS-CCCH----HH--------HHGG---G---CC--------------------------CCBCCSS
T ss_pred CcHHHHHHHHHHhhc-cccc----cc--------cCcc---c---cc-------------ccceeEcCCCCccEEEecCC
Confidence 999999999998721 1000 00 0000 0 00 011222 13 358999999
Q ss_pred HHHHHHHHhhccCCCCCceeEEccCccceE-eeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHHHHHHHh
Q 000981 249 VQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEET 326 (1202)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~ 326 (1202)
++||++++++ ++++++++|||+|++ +|.+ ..++.+|||++|+||+.|+.++++|+|||++|+++|++.+++
T Consensus 186 l~ea~~ll~~-----~~~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~l~~-- 258 (462)
T 2w3s_A 186 SDALADWYLA-----HPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEG-- 258 (462)
T ss_dssp HHHHHHHHHH-----CTTCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEETTEEEEETTCBHHHHHHHHTT--
T ss_pred HHHHHHHHhh-----CCCCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcCCEEEEccCCcHHHHHHHHHH--
Confidence 9999999994 578999999999999 4543 578999999999999999999999999999999999987543
Q ss_pred hhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhhc---
Q 000981 327 KEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE--- 403 (1202)
Q Consensus 327 ~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~vpl~dF~~--- 403 (1202)
.+|.|+++++++||+||||+|||||||++++|. ||++++|+||||+|+|.+.+|+|++|++|||.
T Consensus 259 ---------~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~---sD~~~~L~ALdA~v~l~~~~G~R~vp~~dF~~g~~ 326 (462)
T 2w3s_A 259 ---------PHPALAGLLRRFASEQVRQVATIGGNIANGSPI---GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYR 326 (462)
T ss_dssp ---------TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CSHHHHHHHTTCEEEEEBTTBCCCCBGGGGEEETT
T ss_pred ---------HhHHHHHHHHHhCChhheeeEEcccccccCCCc---chHHHHHHHcCCEEEEEeCCceEEEEHHHhhcccc
Confidence 389999999999999999999999999999998 99999999999999999999999999999997
Q ss_pred CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEecc
Q 000981 404 RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAF 483 (1202)
Q Consensus 404 ~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv 483 (1202)
++.|+++|||++|+||.+.. . +.+||+++| +++|||+||+|+.++++ +++|+++||+||||
T Consensus 327 ~t~L~~~Eii~~i~iP~~~~----------~--~~~~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggv 387 (462)
T 2w3s_A 327 KQDRRPGEFVESVTLPKSAP----------G--LRCYKLSKR-FDQDISAVCGCLNLTLK------GSKIETARIAFGGM 387 (462)
T ss_dssp EESCCTTCEEEEEEEESCCS----------S--EEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESS
T ss_pred cccCCCCcEEEEEEEecCCC----------C--ceEEEEccc-cccchhheeEEEEEEEc------CCeEEEEEEEEEcC
Confidence 57899999999999998764 3 788999999 79999999999999997 36899999999999
Q ss_pred CCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHHhhh
Q 000981 484 GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1202)
Q Consensus 484 ~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~ 549 (1202)
+++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|+|.++..+
T Consensus 388 a~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~rgs~~YR~~la~~l~~r~l~~~~~~ 453 (462)
T 2w3s_A 388 AGV-PKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGE 453 (462)
T ss_dssp SSS-CEECHHHHHTTTTSBCSHHHHHHHGGGHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCc-ceEhHHHHHHhcCCCCCHHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 999 99999999999999999999999999999999999887 899999999999999999998654
No 12
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1.7e-92 Score=837.36 Aligned_cols=405 Identities=25% Similarity=0.387 Sum_probs=369.0
Q ss_pred CCCCCCCCccccccccccCccceeccccCCCCCCceEEEEEecCCCCceeccCCCcccCCCCCeEEEEEcCCCCCCCCCC
Q 000981 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678 (1202)
Q Consensus 599 ~~~~~iGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~ 678 (1202)
+++++|||+++|+|++.||||+++|++|+. +|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.|.
T Consensus 3 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~ 79 (425)
T 3hrd_A 3 KDYQVLGKNKVKVDSLEKVMGTAKFAADYS-FPDMLYAGVFRSTVPHARIVSLDLSKARAIDGVEAVLDYHAIP--GKNR 79 (425)
T ss_dssp CCCSSTBCCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCS--SCCC
T ss_pred CCCCccCCcCcCcchHHHCCCceecccccC-CCCCEEEEEEeCCCCCEEEEEeEhHHHhcCCCeEEEEEcccCC--CcCc
Confidence 467899999999999999999999999997 7899999999999999999999999999999999999999999 5442
Q ss_pred CCcccCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccceEEEecCCCCCcccCHHHHhhcCCC--cccCCcc---c
Q 000981 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---Y 753 (1202)
Q Consensus 679 ~~~~~~~~~~~~a~~~V~y~GqpVa~VVAet~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~~~---~ 753 (1202)
......++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+ +.|+ .
T Consensus 80 -~~~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~~~~~a~~~~a~~~~~-~~n~~~~~ 154 (425)
T 3hrd_A 80 -FGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAITIEY--EEL-EGIFTMERALEEDSPAIHG-DTNIHQVK 154 (425)
T ss_dssp -BCSSSCCBCSSCSSCBCSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHHSTTSCCSST-TCSEEEEE
T ss_pred -CCCCCCccccccCceEEECCCeEEEEEECCHHHHHHHhcCCeEEE--EeC-CCCCCHHHHhhcCCccccC-CCcccccc
Confidence 122346899999999999999999999999999999999999999 888 899999999998874 33 2332 1
Q ss_pred cCCCCCcccccccCCEeEEEEEEEeCcccCCCcCCCeEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEc
Q 000981 754 PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (1202)
Q Consensus 754 ~~~~Gdv~~af~~a~~vvve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~ 833 (1202)
....||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||+|+++
T Consensus 155 ~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~H~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 233 (425)
T 3hrd_A 155 HLEYGDVDAAFKQCDIV-VEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQA 233 (425)
T ss_dssp EEEESCHHHHHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccccCCHHHHhhcCceE-EEEEEEeCCccccCCCCceEEEEECCCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeC
Confidence 35689999999999996 99999999999999999999999997778999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccHHHHHHHHHHHhcCCCEEEEeChHHHHhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCC
Q 000981 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 913 (1202)
Q Consensus 834 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~tR~edm~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 913 (1202)
++|||||+|.+... .+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++|+++++.|+|+|.+
T Consensus 234 ~vGGgFG~K~~~~~--~~~aa~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~~~Ga~~~ 311 (425)
T 3hrd_A 234 TTGGGFGGKLDLSV--QCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGATKDGRLQAVQVEMFGDTGAYAS 311 (425)
T ss_dssp BCCCCTTTTSSCSS--HHHHHHHHHHHCSCEEEECCHHHHHHHSCBCCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCT
T ss_pred CCCCCCCCCcccCH--HHHHHHHHHHhCCCEEEEeehHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEccccccc
Confidence 99999999987543 4678999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCc-chhhhccccCCCCccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCc
Q 000981 914 VSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 992 (1202)
Q Consensus 914 ~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~~~~ 992 (1202)
++. ++.....++.++|+|||++++++.|+||+||++||||||.+|++|++|++|||+|++|||||+|||++|++++++.
T Consensus 312 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~ 391 (425)
T 3hrd_A 312 YGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAK 391 (425)
T ss_dssp THHHHHHHHHHHTTCSBCCSCEEEEEEEEECSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHBCCTTCB
T ss_pred cchHHHHHHHhhcCCCccCCcEEEEEEEEECCCCCCCcccCCCchHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCc
Confidence 766 4445555677999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ccccccCCCccc-cC-CHHHHHHHHHHhC
Q 000981 993 NLFYESSAGEYA-EY-TLPLIWDKLAVSS 1019 (1202)
Q Consensus 993 ~~~~~~~~g~~~-~~-~~~~~l~~~~~~~ 1019 (1202)
+++|.++ ++ ++.+||+++++++
T Consensus 392 -----~~~g~~~~~s~~~~~~l~~~~~~~ 415 (425)
T 3hrd_A 392 -----LATGQVLENSVGLIETLEKAREKA 415 (425)
T ss_dssp -----CTTSCBCCSCCCHHHHHHHHHHHH
T ss_pred -----CCCCCEECCCCCHHHHHHHHHHHH
Confidence 3457665 43 8999999998765
No 13
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=100.00 E-value=3.1e-58 Score=466.27 Aligned_cols=161 Identities=50% Similarity=1.002 Sum_probs=150.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCc
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1202)
.+|+|+|||+++...+++|+++|+||||+++||||||.||++|+||||||+|+++|+.++++.|++|||||+|+.+++|+
T Consensus 3 ~~i~~~vNG~~~~~~~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~ 82 (164)
T 3nvw_A 3 DELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHV 82 (164)
T ss_dssp CCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTC
T ss_pred ceEEEEECCEEEEEecCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCc
Confidence 56999999999754458999999999999999999999999999999999999999888888899999999999999999
Q ss_pred eEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000981 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1202)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRCt 171 (1202)
+|+|||||++.++.||||||||+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||
T Consensus 83 ~I~TiEGL~~~~~~lhpvQ~af~~~~~~QCGfCtPG~imsa~aLl~~-----~p~p-------t~~eI~~al~GNlCRCT 150 (164)
T 3nvw_A 83 AVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCT 150 (164)
T ss_dssp EEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHTSCTTCCCSSS
T ss_pred ceEEecccCCCCCccCHHHHHHHHcCCCcCccchhhHHHHHHHHHHh-----CCCC-------CHHHHHHHHcCCCCCCC
Confidence 99999999865567999999999999999999999999999999965 4666 49999999999999999
Q ss_pred CChhHHHHHHHhh
Q 000981 172 GYRPIADACKSFA 184 (1202)
Q Consensus 172 gy~~i~~a~~~~~ 184 (1202)
||++|++|+++|+
T Consensus 151 gY~~I~~Av~~~~ 163 (164)
T 3nvw_A 151 GYRPILQGFRTFA 163 (164)
T ss_dssp CSHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHh
Confidence 9999999999886
No 14
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=100.00 E-value=2e-56 Score=507.85 Aligned_cols=293 Identities=22% Similarity=0.404 Sum_probs=267.4
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEe-ee-cccCCeeeeCCCcccccceeecCCcEEEc
Q 000981 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KE-VEHYDKYIDIRYIPELSVIRRDQTGIEIG 310 (1202)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~-k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 310 (1202)
++.+.+ .++|++|+|++||+++|++ ++++++++|||+++++ |. ...|+.+|||++|+||+.|+.++++|+||
T Consensus 3 ~l~~~g~~~~y~~P~sl~ea~~ll~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IG 77 (305)
T 3nvz_B 3 QLRFEGERVTWIQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFG 77 (305)
T ss_dssp CEEEECSSCEEEECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEE
T ss_pred ceEecCCCeEEEccCCHHHHHHHHHh-----CCCCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEc
Confidence 467777 8999999999999999984 5789999999999994 43 36789999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeC
Q 000981 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG 390 (1202)
Q Consensus 311 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~ 390 (1202)
|+||++++++++.+.+..++....+.+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.
T Consensus 78 A~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~---sD~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 78 AACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSR 154 (305)
T ss_dssp TTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT---CSSHHHHHHHTCEEEEEET
T ss_pred cCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc---hHHHHHHHHcCCEEEEEcC
Confidence 9999999999877655445555566899999999999999999999999999999998 9999999999999999999
Q ss_pred CceEEEehh-hhhc---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCC
Q 000981 391 QKCEKLMLE-EFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCK 466 (1202)
Q Consensus 391 ~g~R~vpl~-dF~~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~ 466 (1202)
+|+|++|++ |||. ++.|+++|||++|+||.+.. +.++.+||+++| +++|||+||+|+.++++++
T Consensus 155 ~G~R~vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~~----------~~~~~~~k~~~R-~~~d~a~v~~A~~~~~~~~- 222 (305)
T 3nvz_B 155 GTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQPG- 222 (305)
T ss_dssp TEEEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEECSCC-CSSSSCCCEEEEEEEESTT-
T ss_pred CCcEEEEeehHhhcCcccccCCCCcEEEEEEecCCCC----------CCceEEEEEEec-CCCChhheEEEEEEEEeCC-
Confidence 999999998 8997 68999999999999999865 567788999999 7999999999999999742
Q ss_pred CCCCceeeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC-CCCCC-CcHHHHhHhHHHHHHHHHH
Q 000981 467 TGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDGT-SIPAYRSSLAVGFLYEFFG 544 (1202)
Q Consensus 467 ~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~-p~~~~-~s~~YR~~la~~L~~k~l~ 544 (1202)
+++|+++||+||||+++ |+|++++|++|.||+|+++++++|++.+.+++. |.+|. +|++||++|+.+|++|||+
T Consensus 223 ---~~~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~~~~~d~~~s~~YR~~la~~l~~r~l~ 298 (305)
T 3nvz_B 223 ---SMQVKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYL 298 (305)
T ss_dssp ---SSBEEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCeEEEEEEEEEcccCc-EeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 37999999999999999 999999999999999999999999999999996 66665 8999999999999999999
Q ss_pred HHhhhc
Q 000981 545 SLTEMK 550 (1202)
Q Consensus 545 ~~~~~~ 550 (1202)
++.+++
T Consensus 299 ~~~~~l 304 (305)
T 3nvz_B 299 TVLKKL 304 (305)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998764
No 15
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=8.8e-56 Score=500.22 Aligned_cols=275 Identities=21% Similarity=0.307 Sum_probs=255.5
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCC--ceeEEccCccceE-eeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQI--SSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~--~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (1202)
.|+|++|+||+||+++|++ ++ +++++||||+|++ +|.+ ..|+.+|||++|+||+.|+.++++|+|||+||+
T Consensus 3 ~f~y~~P~sl~ea~~ll~~-----~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ-----YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH-----TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHHh-----CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcH
Confidence 4799999999999999995 34 5999999999999 4553 579999999999999999999999999999999
Q ss_pred HHHHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCce
Q 000981 316 SKAIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKC 393 (1202)
Q Consensus 316 ~~l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~ 393 (1202)
++|+++ +++ .+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+
T Consensus 78 ~~l~~~~~~~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~---sD~~~~LlAldA~v~l~~~~g~ 143 (296)
T 3hrd_C 78 TQIENHPFIRS-----------HVRALYKAASQVGSPQIRNLGTIGGNLSTSSVA---GDGVSAMTTLDATVVLESVRGT 143 (296)
T ss_dssp HHHHHCHHHHH-----------HCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEE
T ss_pred HHHHhChhhhh-----------HhHHHHHHHHHhCCHHHhcceehhhhhccCCCc---hHHHHHHHHhCcEEEEEcCCce
Confidence 999975 333 489999999999999999999999999999998 9999999999999999999999
Q ss_pred EEEehhhhhc------CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCC
Q 000981 394 EKLMLEEFLE------RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKT 467 (1202)
Q Consensus 394 R~vpl~dF~~------~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~ 467 (1202)
|+||++|||. ++.|+++|||++|+||.+.. +..+.+||+++| +++|||+||+|+.+++++
T Consensus 144 R~vp~~dF~~g~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~a~v~~A~~~~~~~--- 209 (296)
T 3hrd_C 144 RQMKLTDFFDGEGFKRRNALEADEIMTEVIIDRPDA----------HSASAFYKLAKR-KSLAISVIGGGMAVKVDD--- 209 (296)
T ss_dssp EEEEHHHHHHCCSSSSSSSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEEET---
T ss_pred EEEEHHHHhcccccccccCCCCCcEEEEEEecCCCC----------CCceEEEEeccc-cccchhhheEEEEEEEcC---
Confidence 9999999997 67899999999999999765 567888999999 799999999999999974
Q ss_pred CCCceeeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHH
Q 000981 468 GDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSL 546 (1202)
Q Consensus 468 ~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~ 546 (1202)
+++|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|+|.++
T Consensus 210 --~g~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~ 286 (296)
T 3hrd_C 210 --AGVCTWASMRGGCIGRY-PLHFKQAEEMLVGAPLTMETMEATLPILHDTVYDMARARPSVLYKKESVQGVFKKLFVDI 286 (296)
T ss_dssp --TTEEEEEEEEEETSSSS-CEECHHHHHHHTTSBCCHHHHHTTHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEEEEECCCcc-ccchHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999999 99999999999999999999999999999999998886 899999999999999999999
Q ss_pred hhhc
Q 000981 547 TEMK 550 (1202)
Q Consensus 547 ~~~~ 550 (1202)
.++.
T Consensus 287 ~~~~ 290 (296)
T 3hrd_C 287 LDQL 290 (296)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9876
No 16
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=100.00 E-value=1.1e-53 Score=481.13 Aligned_cols=271 Identities=23% Similarity=0.277 Sum_probs=249.2
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEe-eec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1202)
.|+|++|+|++||++++++ ++++++++|||+|+++ |.+ ..|+.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD-----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH-----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CceEECCCCHHHHHHHHhh-----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHH
Confidence 4789999999999999983 5789999999999994 443 67899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEE
Q 000981 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1202)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~ 395 (1202)
|+++ +++ .+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 80 l~~~~~~~~-----------~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p~---sD~~~~L~Al~A~v~l~~~~g~R~ 145 (288)
T 1t3q_C 80 NKTDPTVAK-----------CVPILPKVLAHVAHQAVRNRGTLGGSLAHADAG---AEMPFLMATLGATMYIASSAGVRS 145 (288)
T ss_dssp HHHCHHHHH-----------HCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEE
T ss_pred HhcCHHHHH-----------HHHHHHHHHHHhCCHHHHcceechhhcccCCCc---HHHHHHHHHcCcEEEEEcCCceEE
Confidence 9973 444 389999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCce
Q 000981 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1202)
Q Consensus 396 vpl~dF~~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~ 472 (1202)
||++|||. ++.|+++|||++|+||.+.. ... ++|+++| .+ |||+||+|+.+++++ ++
T Consensus 146 vp~~dF~~g~~~t~L~~~Eil~~I~iP~~~~----------~~~--y~K~~~R-~~-d~a~v~~a~~~~~~~------~~ 205 (288)
T 1t3q_C 146 VSATDFMKGHYFTDLEAGEVLVRVEIPIPAL----------HWE--FDEYARR-KG-DYALVMAAAGLSMQG------GR 205 (288)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCSS----------EEE--EEEECSS-TT-SCCSEEEEEEEEEET------TE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEecCCCC----------CCc--EEEeCCC-cc-chhheEEEEEEEEcC------Ce
Confidence 99999997 57899999999999998764 222 6888877 44 999999999999973 58
Q ss_pred eeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHHhhhc
Q 000981 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1202)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1202)
|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 206 i~~~ria~Ggv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 283 (288)
T 1t3q_C 206 CVAARIALGAVEER-AHQAIRANDFLVGKVIDESTAATAAELATEGLEPRSDIHGSRDLRLSLAKAITQRVILKAAQGA 283 (288)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHHHTTCCCCHHHHHHHHHHHHTTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCe-eEEcHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999999999987 8999999999999999999998764
No 17
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=2.2e-53 Score=431.58 Aligned_cols=152 Identities=36% Similarity=0.646 Sum_probs=143.4
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccC
Q 000981 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1202)
.|+|+|+|||++++++ ++|+++|+|+||+++||||+|.||++|.||||||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~v~-v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~v----------dG~~v~sC~~~~~~~~G 71 (160)
T 3hrd_D 3 KITINLNLNGEARSIV-TEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIF----------NGDPVTTCCMLAGQADE 71 (160)
T ss_dssp CEEEEEEETTEEEEEE-ECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred cceEEEEECCEEEEEe-cCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEE----------CCEEEEchhhhhhhhCC
Confidence 4689999999999997 899999999999999999999999999999999999 79999999999999999
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRC 170 (1202)
++|+|||||++ ++.|||||+||+++|++|||||||||||++++||+ ++|+| |++||+++|+||||||
T Consensus 72 ~~I~TiEgl~~-~~~l~pvq~af~~~~~~QCGfCtpG~ims~~all~-----~~~~p-------t~~eI~~al~GNlCRC 138 (160)
T 3hrd_D 72 STIITLEGVAE-DGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLD-----KNPDP-------TDEEITVAMSGNLCRC 138 (160)
T ss_dssp EEEECGGGTSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHT-----TCSSC-------CHHHHHHHHTTCCCSS
T ss_pred CceEEeCCCCC-CCccCHHHHHHHHcCCCcCCcchhhHHHHHHHHHH-----hCCCC-------CHHHHHHHHcCCCCCC
Confidence 99999999986 56799999999999999999999999999999994 45666 4999999999999999
Q ss_pred CCChhHHHHHHHhhhc
Q 000981 171 TGYRPIADACKSFAAD 186 (1202)
Q Consensus 171 tgy~~i~~a~~~~~~~ 186 (1202)
|||++|++|++.++..
T Consensus 139 tgY~~I~~Av~~aa~~ 154 (160)
T 3hrd_D 139 TGYIKIHAAVRYAVER 154 (160)
T ss_dssp SCSHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999999998753
No 18
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=100.00 E-value=1.3e-52 Score=473.08 Aligned_cols=274 Identities=18% Similarity=0.231 Sum_probs=251.3
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEe-eec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1202)
.|+|++|+|++||+++++++ ++++++++|||+++++ |.+ ..|+.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred ceEEECcCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 47899999999999999853 3789999999999994 654 57899999999999999999999999999999999
Q ss_pred HHH--HHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEE
Q 000981 318 AIE--ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1202)
Q Consensus 318 l~~--~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~ 395 (1202)
|++ .+++. +|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 81 l~~~~~~~~~-----------~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p~---sD~~~~L~Al~A~v~l~~~~G~r~ 146 (288)
T 1n62_C 81 LIGSDFLAAK-----------LPIIRETSLLIADPQIRYMGTIGGNAANGDPG---NDMPALMQCLGAAYELTGPEGARI 146 (288)
T ss_dssp HHHCHHHHHH-----------CHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTT---CSHHHHHHHHTCEEEEEETTEEEE
T ss_pred HhcChHHHHH-----------HHHHHHHHHHhCCHHHHccccccchhccCCCc---hHHHHHHHHhCcEEEEEeCCccEE
Confidence 996 45443 89999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCce
Q 000981 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1202)
Q Consensus 396 vpl~dF~~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~ 472 (1202)
+|++|||. ++.|+++|||++|.||.+.. +..+.++|+.+| ..|||+||+|+.++++ +++
T Consensus 147 v~~~df~~g~~~t~l~~~eil~~i~ip~~~~----------~~~~~y~k~~rr--~~d~a~v~~a~~~~~~------~~~ 208 (288)
T 1n62_C 147 VAARDYYQGAYFTAIEPGELLTAIRIPVPPT----------GHGYAYEKLKRK--IGDYATAAAAVVLTMS------GGK 208 (288)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCCT----------TCEEEEEEECSS--TTCCCSEEEEEEEEEE------TTE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEeCCCCC----------CCceEEEEeCCC--ccCHhheeEEEEEEEc------CCe
Confidence 99999997 56899999999999998764 345677888755 5699999999999997 368
Q ss_pred eeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHHhhhc
Q 000981 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1202)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1202)
|+++||+|||++++ |+|+.++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 209 i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 286 (288)
T 1n62_C 209 CVTASIGLTNVANT-PLWAEEAGKVLVGTALDKPALDKAVALAEAITAPASDGRGPAEYRTKMAGVMLRRAVERAKARA 286 (288)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHHHTTSCCCHHHHHHHHHHHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEECCcCc-eEECHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 99999999999999999999999999999999999987 8999999999999999999998764
No 19
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=100.00 E-value=2.7e-52 Score=474.36 Aligned_cols=268 Identities=19% Similarity=0.218 Sum_probs=246.2
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE-eeec-ccCCeeeeCCCcccccceeecCC-cEEEcccCcHH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQT-GIEIGATVTIS 316 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~-~l~IGA~vTl~ 316 (1202)
.|+|++|+||+||+++|+ + +++++|+|||+|++ +|.. ..|+.+|||++|+||+.|+.+++ +|+|||+||++
T Consensus 6 ~f~y~~P~sl~ea~~ll~-----~-~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~ 79 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA-----A-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLE 79 (324)
T ss_dssp CCEEECCSSHHHHHHHTT-----S-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHH
T ss_pred ceEEEccCCHHHHHHHHh-----C-CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHH
Confidence 478999999999999998 3 78999999999999 5654 68999999999999999999865 99999999999
Q ss_pred HHHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCcc--------------------------------
Q 000981 317 KAIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNL-------------------------------- 362 (1202)
Q Consensus 317 ~l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl-------------------------------- 362 (1202)
+|+++ +++ .+|.|++++++|||+||||+|||||||
T Consensus 80 ~l~~~~~~~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNl~~~~rC~y~~~~~~~k~~g~~c~a~~g~~~~~ 148 (324)
T 1rm6_B 80 AIAEHDAIRT-----------TWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHV 148 (324)
T ss_dssp HHHHCHHHHH-----------HSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSS
T ss_pred HHHhChHHHH-----------HHHHHHHHHHHhCCHHHcceeEeeeecccccccccccccccccccCcccccccccccee
Confidence 99986 332 489999999999999999999999999
Q ss_pred ------ccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhhc-----CCCCCCCceEEEEEcCCCCccCCccccC
Q 000981 363 ------VMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE-----RPPLDSRSILLSVEIPCWDLTRNVTSET 431 (1202)
Q Consensus 363 ------~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~vpl~dF~~-----~~~l~~~eii~~I~iP~~~~~~~~~~~~ 431 (1202)
|+++|. ||++|+|+||||+|+|.+.+|+|+||++|||. ++.|+++|||++|+||.. .
T Consensus 149 a~~g~~c~a~p~---sD~~~~L~AldA~v~l~~~~g~R~vp~~dF~~~~~~~~t~L~~~Eil~~I~iP~~-~-------- 216 (324)
T 1rm6_B 149 IVKSDRCYATYH---GDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT-G-------- 216 (324)
T ss_dssp STTCSSCCCBCC---CSHHHHHHHTTCEEEEEETTEEEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC-T--------
T ss_pred ecccccccCCCc---chhHHHHHHcCCEEEEEeCCCcEEEEHHHHhcCCccccccCCCCCEEEEEEecCC-C--------
Confidence 588887 99999999999999999999999999999995 468999999999999963 2
Q ss_pred CcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHH
Q 000981 432 NSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEA 511 (1202)
Q Consensus 432 ~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a 511 (1202)
...+.++|+++| +++|||+||+|+.++++ +++|+++||+|||++++ |+|+ ++|++| ||.|+++++++|
T Consensus 217 --~~~~~y~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggva~~-p~ra-~~E~~L-G~~~~~~~~~~a 284 (324)
T 1rm6_B 217 --AWSAAYSKVRIR-DAVDFPLAGVAAALQRD------GDRIAGLRVAITGSNSA-PLMV-PVDALL-GGNWDDAAAETL 284 (324)
T ss_dssp --TCEEEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEEC-CCGGGT-TSCCSHHHHHHH
T ss_pred --CCceEEEEECcC-CccchhhEEEEEEEEEc------CCcEEEEEEEEEcCCCe-EEeh-HHHHHc-CCCCCHHHHHHH
Confidence 356778899999 79999999999999987 36899999999999999 9999 999999 999999999999
Q ss_pred HHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHHhh
Q 000981 512 IKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTE 548 (1202)
Q Consensus 512 ~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~ 548 (1202)
++.+.+++.|.+|. +|++||++|+.+|++|+|.++.+
T Consensus 285 ~~~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~~~ 322 (324)
T 1rm6_B 285 AQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWE 322 (324)
T ss_dssp HHHHHHHCCCCTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999887 89999999999999999998864
No 20
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=100.00 E-value=6.5e-50 Score=451.01 Aligned_cols=273 Identities=19% Similarity=0.267 Sum_probs=250.1
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEe-eec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1202)
.|+|++|+|++|++++++++ ++++++++|||+|+++ +.. ..+..+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~----~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~ 80 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND 80 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred cceEECCCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 47899999999999999853 3789999999999994 664 56899999999999999999999999999999999
Q ss_pred HHH--HHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEE
Q 000981 318 AIE--ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1202)
Q Consensus 318 l~~--~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g~R~ 395 (1202)
|.+ .+++. +|.|.++++++||+||||+|||||||++++|. ||++++|+||||+|++.+.+|.|+
T Consensus 81 l~~~~~~~~~-----------~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~---~D~~~~l~Al~A~v~~~~~~G~r~ 146 (287)
T 1ffv_C 81 LISSPIVQAR-----------LPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG---NDHPALSIAVEAHFVLEGPNGRRT 146 (287)
T ss_dssp HHHCHHHHHH-----------CHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT---CSHHHHHHHTTCEEEEEETTEEEE
T ss_pred HhhChHHHHH-----------hHHHHHHHHHhCCHHHhcceechhhhccCCCc---HHHHHHHHHcCcEEEEEcCCceEE
Confidence 996 34443 89999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCccccCCcceeeeEEEecCCCCCCccceeeeeEEEEEcCCCCCCCce
Q 000981 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1202)
Q Consensus 396 vpl~dF~~---~~~l~~~eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~ 472 (1202)
+|++|||. ++.|+++|||++|.||.... +..+.++|+.+| ..|||+||+|+.++++ +++
T Consensus 147 i~~~df~~g~~~t~l~~~eii~~i~ip~~~~----------~~~~~~~k~~rr--~~d~a~v~~a~~~~~~------~~~ 208 (287)
T 1ffv_C 147 VPADGFFLGTYMTLLEENEVMVEIRVPAFAQ----------GTGWAYEKLKRK--TGDWATAGCAVVMRKS------GNT 208 (287)
T ss_dssp EESTTTEEETTEESCCTTCEEEEEEEECCCT----------TCEEEEEEECSS--TTSCCSEEEEEEEEEE------TTE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEecCCCC----------CCceEEEEECCc--ccchhheEEEEEEEEc------CCe
Confidence 99999997 56899999999999998764 345677888755 5699999999999997 368
Q ss_pred eeeeEEEEeccCCcccccHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CcHHHHhHhHHHHHHHHHHHHhhh
Q 000981 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1202)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~ 549 (1202)
|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++
T Consensus 209 i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~ 285 (287)
T 1ffv_C 209 VSHIRIALTNVAPT-ALRAEAAEAALLGKAFTKEAVQAAADAAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 (287)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHTTBTSBCCHHHHHHHHHHHHHTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcccCC-cccCHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999999999987 899999999999999999998865
No 21
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=100.00 E-value=2e-50 Score=412.70 Aligned_cols=151 Identities=38% Similarity=0.732 Sum_probs=142.7
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccC
Q 000981 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1202)
.++|+|+|||++++++ ++|+++|||+||++++|+|+|.||++|.||||||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~G 71 (163)
T 1ffv_A 3 KKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI----------DGRSVKSCTHLAVQCDG 71 (163)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEE----------CCcEecchHhhHHHhCC
Confidence 3579999999999997 899999999999999999999999999999999999 79999999999999999
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRC 170 (1202)
++|+|||||++ .+.+||+|++|+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 72 ~~I~TiEgL~~-~~~l~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~ei~~~l~gnlCRC 138 (163)
T 1ffv_A 72 SEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQE-----NPNP-------TEAEIRMGMTGNLCRC 138 (163)
T ss_dssp CEEECGGGTSB-TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSS
T ss_pred ceEEEECCCCC-CCCcCHHHHHHHHhCCccCccccHhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCC
Confidence 99999999986 678999999999999999999999999999999965 4666 4999999999999999
Q ss_pred CCChhHHHHHHHhhh
Q 000981 171 TGYRPIADACKSFAA 185 (1202)
Q Consensus 171 tgy~~i~~a~~~~~~ 185 (1202)
|||++|++|++.++.
T Consensus 139 tgY~~I~~Av~~~a~ 153 (163)
T 1ffv_A 139 TGYQNIVKAVQYAAR 153 (163)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999875
No 22
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=100.00 E-value=2.8e-50 Score=412.72 Aligned_cols=152 Identities=37% Similarity=0.728 Sum_probs=142.8
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccC
Q 000981 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1202)
.++|+|+|||++++++ ++|+++|||+||++++|+|+|.||++|.||+|||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~v----------dG~~v~SC~~~~~~~~G 71 (166)
T 1n62_A 3 KAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL----------DGMSVKSCTMFAVQANG 71 (166)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CceEEEEECCEEEEEe-cCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEE----------CCcEEechhhhHHHhCC
Confidence 3579999999999997 899999999999999999999999999999999999 79999999999999999
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRC 170 (1202)
++|+|||||++.++.+||||++|+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 72 ~~V~TiEgL~~~~~~~~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~eI~~~l~gNlCRC 139 (166)
T 1n62_A 72 ASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE-----NPSP-------TEAEIRFGIGGNLCRC 139 (166)
T ss_dssp CEEECGGGSSCTTSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSS
T ss_pred ceEEEeCCCCCcCCccCHHHHHHHHcCCccCCccchhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCC
Confidence 999999999853568999999999999999999999999999999965 4666 4999999999999999
Q ss_pred CCChhHHHHHHHhhh
Q 000981 171 TGYRPIADACKSFAA 185 (1202)
Q Consensus 171 tgy~~i~~a~~~~~~ 185 (1202)
|||++|++|++.++.
T Consensus 140 tgY~~I~~Av~~~a~ 154 (166)
T 1n62_A 140 TGYQNIVKAIQYAAA 154 (166)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999875
No 23
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=100.00 E-value=1.4e-45 Score=378.15 Aligned_cols=151 Identities=37% Similarity=0.651 Sum_probs=142.3
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccC
Q 000981 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1202)
.++|+|+|||++++++ ++|++||||+||+.++++|+|.||++|.||+|||+| ||++++||++|+.+++|
T Consensus 2 ~~~i~~~vNG~~~~v~-~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~G 70 (161)
T 1rm6_C 2 KNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLV----------DDRPRLACSTLAHQVAG 70 (161)
T ss_dssp EEEEEEEETTEEEEEE-EETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CceEEEEECCEEEEEe-cCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEE----------CCcEEechHHHHHHhCC
Confidence 4579999999999996 799999999999999999999999999999999999 79999999999999999
Q ss_pred ceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000981 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1202)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCRC 170 (1202)
++|+|||||++ .+.+||+|++|+++|++|||||||||||++|+||.+ +|+| |+++|+++|+||||||
T Consensus 71 ~~v~TiEgL~~-~~~~~p~q~a~~~~~~~qCG~Ctpg~im~a~~ll~~-----~~~p-------t~~~i~~~l~gnlcRC 137 (161)
T 1rm6_C 71 KKVETVESLAT-QGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRK-----NPSP-------SRDEIKAALAGNLCRC 137 (161)
T ss_dssp SEEECGGGSSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSS
T ss_pred ceEEEECCCCC-CCccCHHHHHHHHhCCCcCCCCchHHHHHHHHHHhc-----CCCC-------CHHHHHHHHcCCeECC
Confidence 99999999986 578999999999999999999999999999999965 4555 4999999999999999
Q ss_pred CCChhHHHHHHHhhh
Q 000981 171 TGYRPIADACKSFAA 185 (1202)
Q Consensus 171 tgy~~i~~a~~~~~~ 185 (1202)
|||++|++|++.++.
T Consensus 138 tgy~~i~~A~~~~~~ 152 (161)
T 1rm6_C 138 TGYVKIIKSVETAAA 152 (161)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999875
No 24
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=100.00 E-value=4e-41 Score=348.71 Aligned_cols=152 Identities=37% Similarity=0.710 Sum_probs=142.1
Q ss_pred cccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceecccccccc
Q 000981 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1202)
Q Consensus 10 ~~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1202)
+.|.|+|+|||+.++++ ++|++|||++||+.+||+|+|.||++|.||+|+|+| +|++++||++|+..++
T Consensus 8 ~~m~i~~~ing~~~~~~-v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~v----------dG~~v~sC~~~~~~~~ 76 (168)
T 1t3q_A 8 QLMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILI----------DGAPMRSCLTLAVQAE 76 (168)
T ss_dssp CCEEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEE----------TTEEEEGGGSBGGGGT
T ss_pred CcceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEE----------CCCEeechhhHHHHhC
Confidence 45789999999999997 799999999999989999999999999999999999 7999999999999999
Q ss_pred CceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccc
Q 000981 90 GCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCR 169 (1202)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~t~~~i~~~l~gnlCR 169 (1202)
|++|+|||||++ ...+||+|++|+++|+.|||||+|||+|++|+||.+ +|.| |+++|+++|+|||||
T Consensus 77 G~~v~Tiegl~~-~~~~~~~q~a~~~~~~~qCG~C~pg~i~~a~~ll~~-----~~~p-------~~~~i~~~l~gnlcR 143 (168)
T 1t3q_A 77 GCSIETVEGLSQ-GEKLNALQDSFRRHHALQCGFCTAGMLATARSILAE-----NPAP-------SRDEVREVMSGNLCR 143 (168)
T ss_dssp TCEEECGGGTCC-SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHGGGSCCS
T ss_pred CCeEEEEcCCCC-ccccCHHHHHHHHhCCCcCCCchHHHHHHHHHHHhc-----CCCC-------CHHHHHHHHcCCccc
Confidence 999999999986 567999999999999999999999999999999954 3445 499999999999999
Q ss_pred cCCChhHHHHHHHhhh
Q 000981 170 CTGYRPIADACKSFAA 185 (1202)
Q Consensus 170 Ctgy~~i~~a~~~~~~ 185 (1202)
||||++|++|++.++.
T Consensus 144 Ct~y~~~v~A~~~~~~ 159 (168)
T 1t3q_A 144 CTGYETIIDAITDPAV 159 (168)
T ss_dssp SSCSHHHHHHHTCHHH
T ss_pred CCCchHHHHHHHHHHH
Confidence 9999999999998764
No 25
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.89 E-value=5.2e-23 Score=235.36 Aligned_cols=144 Identities=23% Similarity=0.210 Sum_probs=130.9
Q ss_pred ceeeeEeeeeeecccc----cccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcC
Q 000981 1038 RKKGVCRLPIVHEVTL----RSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQA 1113 (1202)
Q Consensus 1038 ~~rGia~~~~~~~~~~----~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~ 1113 (1202)
++||+|++++.++.+. .+..+.|+|++||+|+|.+|.+|||||++|+++||+||+||+ |+++|+|..+
T Consensus 2 k~rGiGia~~~~~~g~~~~~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi--------~~e~V~v~~~ 73 (330)
T 3hrd_B 2 KKRGKGVGSMWYGIGNTGLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGL--------DYEKIHVTWG 73 (330)
T ss_dssp EEEEEEEEEEEEECSSTTSCCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEES
T ss_pred cEEEEEEEEEEEecCCCCCCCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCC--------CHHHEEEEec
Confidence 4678888888888762 247899999999999999999999999999999999999999 9999999999
Q ss_pred CCccccCCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhCC
Q 000981 1114 DTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHICS 1175 (1202)
Q Consensus 1114 dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~l~~~l~~~a~~~~~~------------------~~~~~~~elv~~a~~~~ 1175 (1202)
||+.+|++++|+|||++.+.|.|+++||++||+||+++|+++|+. .+.++|.||+..+|..+
T Consensus 74 DT~~~p~~~~T~gSrst~~~g~Av~~Aa~~lr~~L~~~AA~~~~~~~~~l~~~~G~v~~~~~~~~~~s~~ela~~a~~~~ 153 (330)
T 3hrd_B 74 DTMVTPDGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAG 153 (330)
T ss_dssp BTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSSCCCSSSBCCCCSSCSCSCCBHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCcchHhHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEECCCCCCcccHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999988752 23589999999999999
Q ss_pred CceEEEEeeecCcc
Q 000981 1176 SEALSTEFILFNFV 1189 (1202)
Q Consensus 1176 v~l~a~~~~~~~~~ 1189 (1202)
+.|+++++|.....
T Consensus 154 ~~l~~~g~~~~~~~ 167 (330)
T 3hrd_B 154 RMAVGAGSYNPNTT 167 (330)
T ss_dssp CCEEEEEEECCCCC
T ss_pred CceeEEEEecCCCC
Confidence 99999999975543
No 26
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.76 E-value=5.2e-09 Score=116.38 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=59.9
Q ss_pred EEEEEccCCC-CCcHHHHHhh---ccCC-cccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCceEEE
Q 000981 21 EKFEVSSVDP-STTLLEFLRY---HTRF-KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1202)
Q Consensus 21 ~~~~~~~~~p-~~~L~~~LR~---~~~l-~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1202)
+.++++ +++ ++||||.||+ ++.. +++|.||++|.||+|+|.| ||+++.||++++....| .++|
T Consensus 55 ~~~~v~-v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~I----------nG~~~laC~t~v~~~~~-~~~t 122 (282)
T 3vr8_B 55 QKFDVD-LDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNI----------AGENTLACICNIDQNTS-KTTK 122 (282)
T ss_pred EEEEEE-eCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEE----------CCEEecchhhhHhHhcC-CcEE
Confidence 467776 677 9999999996 4444 8999999999999999999 89999999999987666 7899
Q ss_pred eecCCC
Q 000981 96 SEGLGN 101 (1202)
Q Consensus 96 vEgl~~ 101 (1202)
||||.+
T Consensus 123 IepL~~ 128 (282)
T 3vr8_B 123 IYPLPH 128 (282)
T ss_pred eccCCC
Confidence 999974
No 27
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.64 E-value=3.3e-08 Score=108.14 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=61.0
Q ss_pred EEEEEccCCC--CCcHHHHHhhcc---CCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceecccccc--ccCceE
Q 000981 21 EKFEVSSVDP--STTLLEFLRYHT---RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS--VNGCLI 93 (1202)
Q Consensus 21 ~~~~~~~~~p--~~~L~~~LR~~~---~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~--~~g~~i 93 (1202)
+.++++ +++ ++|||+.||+.. +..+++.||++|.||+|+|.| +|+++.||.+++.. ++|.+
T Consensus 21 ~~~~v~-~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~~~g~~~~~- 88 (238)
T 2wdq_B 21 QDYTLE-ADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM----------NGKNGLACITPISALNQPGKK- 88 (238)
T ss_dssp EEEEEE-CCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGTCCTTSC-
T ss_pred EEEEee-cCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEE----------CCEEEcccccchhhhccCCCC-
Confidence 567776 788 999999999876 789999999999999999999 79999999999999 87777
Q ss_pred EEeecCC
Q 000981 94 TTSEGLG 100 (1202)
Q Consensus 94 ~TvEgl~ 100 (1202)
+|||+|.
T Consensus 89 ~~ie~l~ 95 (238)
T 2wdq_B 89 IVIRPLP 95 (238)
T ss_dssp EEEECCT
T ss_pred EEEeeCC
Confidence 8999996
No 28
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.63 E-value=1.8e-08 Score=123.83 Aligned_cols=107 Identities=23% Similarity=0.453 Sum_probs=87.9
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhhccCCcccc----cCC-C-CCCCCccEEEEeccCCCcCCCCce-eeceeccccc
Q 000981 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----LGC-G-EGGCGACVVLLSKYNPELDQLEDF-TISSCLTLLC 86 (1202)
Q Consensus 14 i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k----~gC-~-~G~CGaCtV~~~~~~~~~~~~~~~-~v~sCl~~~~ 86 (1202)
|+|+|||+.+++ ++++|||+.||+. |+.... .+| + .|.||+|+|.| +++ .+.||.+++.
T Consensus 2 v~~~ing~~v~v---~~g~tiL~a~~~~-gi~ip~lC~~~~~~~~~G~Cg~C~V~v----------~g~~~~~aC~t~v~ 67 (574)
T 3c8y_A 2 KTIIINGVQFNT---DEDTTILKFARDN-NIDISALCFLNNCNNDINKCEICTVEV----------EGTGLVTACDTLIE 67 (574)
T ss_dssp EEEEETTEEEEE---CCCCBHHHHHHHT-TCCCCCSSCBTTBCCSSSCCCTTEEEE----------TTTEEEEGGGCBCC
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcccCCCCCCCCcccCCCCEEEe----------CCCcccccCCCCcc
Confidence 899999998875 5799999999974 664221 344 5 89999999999 455 8999999987
Q ss_pred cccCceEEEeecCCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHh
Q 000981 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVD 138 (1202)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~ 138 (1202)
+|..|.|.|+... ..-+.+++.|...|..+|++|.++..+.+..+...
T Consensus 68 --~gm~V~T~~~~~~--~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~~a~~ 115 (574)
T 3c8y_A 68 --DGMIINTNSDAVN--EKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIK 115 (574)
T ss_dssp --TTCEEESSCHHHH--HHHHHHHHHHHTTSCCCCTTCTTTTSCHHHHHHHH
T ss_pred --cceeEEecchhhh--hhHHHHHHHHHhccCCCCCcCCCCcchHHHHHHHH
Confidence 8999999999853 23367999999999999999999988888776543
No 29
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.46 E-value=2.3e-07 Score=101.69 Aligned_cols=69 Identities=20% Similarity=0.361 Sum_probs=59.8
Q ss_pred EEEEEccCCCCCcHHHHHhh---ccCCc-ccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCceEEEe
Q 000981 21 EKFEVSSVDPSTTLLEFLRY---HTRFK-SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1202)
Q Consensus 21 ~~~~~~~~~p~~~L~~~LR~---~~~l~-g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1202)
+.++++ +++++||||.||. ++..+ +.+.+|.+|.||+|+|.| +|+++.||.+++..++| +++||
T Consensus 24 ~~~~v~-~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i----------~G~~~~aC~~~~~~~~g-~~~~i 91 (241)
T 2bs2_B 24 QEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMI----------NGRPSLACRTLTKDFED-GVITL 91 (241)
T ss_dssp EEEEEE-CCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGCTT-SEEEE
T ss_pred EEEEEe-CCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEE----------CCCeecchhCcHhHcCC-CeEEE
Confidence 557776 7899999999986 33443 789999999999999999 79999999999999988 78999
Q ss_pred ecCCC
Q 000981 97 EGLGN 101 (1202)
Q Consensus 97 Egl~~ 101 (1202)
|+|.+
T Consensus 92 e~l~~ 96 (241)
T 2bs2_B 92 LPLPA 96 (241)
T ss_dssp ECCTT
T ss_pred ecCCC
Confidence 99963
No 30
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.45 E-value=1.6e-07 Score=103.65 Aligned_cols=69 Identities=19% Similarity=0.295 Sum_probs=60.2
Q ss_pred EEEEEccCCC-CCcHHHHHhhcc---C-CcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCceEEE
Q 000981 21 EKFEVSSVDP-STTLLEFLRYHT---R-FKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1202)
Q Consensus 21 ~~~~~~~~~p-~~~L~~~LR~~~---~-l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1202)
+.++++ +++ ++||||.||+.. . ..+.+.+|.+|.||+|+|.| +|+++.||.+++..++|. ++|
T Consensus 31 ~~~~v~-~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i----------~G~~~~aC~~~~~~~~g~-~~~ 98 (252)
T 2h88_B 31 QTYEVD-LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNI----------AGGNTLACTKKIDPDLSK-TTK 98 (252)
T ss_dssp EEEEEE-GGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEE----------TTEEEEGGGSBCCCCTTS-CEE
T ss_pred EEEEEe-cCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEE----------CCcEEccccCCHhHcCCC-ceE
Confidence 567776 677 999999999842 2 57899999999999999999 799999999999999887 899
Q ss_pred eecCCC
Q 000981 96 SEGLGN 101 (1202)
Q Consensus 96 vEgl~~ 101 (1202)
||+|.+
T Consensus 99 iepl~~ 104 (252)
T 2h88_B 99 IYPLPH 104 (252)
T ss_dssp EECSTT
T ss_pred EecccC
Confidence 999964
No 31
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.09 E-value=3.5e-06 Score=92.30 Aligned_cols=67 Identities=28% Similarity=0.477 Sum_probs=56.8
Q ss_pred EEEEEccCCCCCcHHHHHhhccC-----CcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccccCceEEE
Q 000981 21 EKFEVSSVDPSTTLLEFLRYHTR-----FKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1202)
Q Consensus 21 ~~~~~~~~~p~~~L~~~LR~~~~-----l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1202)
+.++++ +++++|||+.||+. | ..+.+.+|.+|.||+|+|.| +|+++.||.+++....| ++|
T Consensus 24 ~~~~~~-~~~~~tll~al~~~-~~~~~p~l~~~~~c~~G~Cg~C~v~v----------~G~~~~aC~~~~~~~~~--~~~ 89 (243)
T 1kf6_B 24 AFYEVP-YDATTSLLDALGYI-KDNLAPDLSYRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTD--GMK 89 (243)
T ss_dssp EEEEEE-ECTTCBHHHHHHHH-HHHTCTTCCCCCCCSSSSSCCCEEEE----------TTEEEEGGGCBGGGCTT--CEE
T ss_pred EEEEEe-cCCCChHHHHHHHc-CcccCCCcccccCCCCCcCCCCEeEE----------CCEEEeeeeeEHhhCCC--cEE
Confidence 456665 68999999999974 4 24789999999999999999 78999999999988765 689
Q ss_pred eecCCC
Q 000981 96 SEGLGN 101 (1202)
Q Consensus 96 vEgl~~ 101 (1202)
||+|..
T Consensus 90 i~~l~~ 95 (243)
T 1kf6_B 90 VEALAN 95 (243)
T ss_dssp EECCTT
T ss_pred EEecCC
Confidence 999863
No 32
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=97.92 E-value=3.9e-05 Score=71.17 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=59.0
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEeccCC--CcC-------CCCceeeceec
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKYNP--ELD-------QLEDFTISSCL 82 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~~~~--~~~-------~~~~~~v~sCl 82 (1202)
+|+|.+||+.++++ ++++++|++.|++. |+.|++.+|+ .|.||.|.|.|..-.. .+. ....-.+.+|.
T Consensus 2 ~v~i~~~g~~~~~~-~~~g~tll~a~~~~-gi~gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq 79 (93)
T 1l5p_A 2 TITAVKGGVKKQLK-FEDDQTLFTVLTEA-GLMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACA 79 (93)
T ss_dssp EEEEEETTEEEEEE-CCTTEEHHHHHHTT-TSSCCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGG
T ss_pred eEEEEeCCcEEEEE-ECCCChHHHHHHHc-CCCcCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeE
Confidence 47899999998997 79999999999976 9999999999 9999999999854211 010 11222466777
Q ss_pred c-ccccccCceE
Q 000981 83 T-LLCSVNGCLI 93 (1202)
Q Consensus 83 ~-~~~~~~g~~i 93 (1202)
. |...++|..|
T Consensus 80 ~~~~~d~~g~~v 91 (93)
T 1l5p_A 80 ITLSGENDGAVF 91 (93)
T ss_dssp CEECGGGTTCEE
T ss_pred CEECCCCCceEE
Confidence 4 4556677554
No 33
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=97.48 E-value=8.5e-05 Score=85.15 Aligned_cols=153 Identities=13% Similarity=0.084 Sum_probs=98.2
Q ss_pred CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecC-CcEEEcccCcHHHH
Q 000981 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQ-TGIEIGATVTISKA 318 (1202)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~-~~l~IGA~vTl~~l 318 (1202)
-..++.|+|.+|+.++++.... .+-...+++|||.+.+... ....+|+++ +..+..++.++ ..+++||++++.+|
T Consensus 15 a~~~v~p~s~eel~~~l~~a~~-~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~~l 90 (340)
T 1uxy_A 15 AQHIVCAEDEQQLLNAWQYATA-EGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGAGENWHRL 90 (340)
T ss_dssp EEEEEEESSHHHHHHHHHHHHH-TTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBHHHH
T ss_pred ccEEEEeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEecCCCHHHH
Confidence 3568899999999998763211 2456889999999877432 356889985 66665555555 47999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHH---HHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeC-Cce-
Q 000981 319 IEALKEETKEFHSEALMVFKKIAGHM---EKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG-QKC- 393 (1202)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l---~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~-~g~- 393 (1202)
.+.+.++. +..|.-.. ..+++..++|.|+-|++++..-. .|++... +|+
T Consensus 91 ~~~~~~~G----------l~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~----------------~v~vv~~~~G~v 144 (340)
T 1uxy_A 91 VKYTLQEG----------MPGLENLALIPGCVGSSPIQNIGAYGVELQRVCA----------------YVDSVELATGKQ 144 (340)
T ss_dssp HHHHHHTT----------CCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEE----------------EEEEEETTTTEE
T ss_pred HHHHHHCC----------CCccccccCCccchhHHHHhccccchhhHHhhee----------------EEEEEECCCCcE
Confidence 99865541 11110000 24556666666666655443322 2677775 674
Q ss_pred EEEehhhhhc--C-CCCC----CCceEEEEEcCCCC
Q 000981 394 EKLMLEEFLE--R-PPLD----SRSILLSVEIPCWD 422 (1202)
Q Consensus 394 R~vpl~dF~~--~-~~l~----~~eii~~I~iP~~~ 422 (1202)
++++-+|++- + ..+. ...||+++.+...+
T Consensus 145 ~~~~~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~ 180 (340)
T 1uxy_A 145 VRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (340)
T ss_dssp EEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred EEEeHHHhccccCcCccCCcCCCCEEEEEEEEEEEc
Confidence 8888888553 2 2222 36789988876543
No 34
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.47 E-value=0.00015 Score=67.81 Aligned_cols=50 Identities=14% Similarity=0.387 Sum_probs=43.0
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
..|+|.+||..++++ ++++++||+.|++. |+ .++.+|+.|.||.|.|.|.
T Consensus 3 ~~v~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 52 (98)
T 1iue_A 3 YNITLRTNDGEKKIE-CNEDEYILDASERQ-NV-ELPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHT-TC-CCCCSSCSSSSSTTEEEEE
T ss_pred EEEEEEeCCCeEEEE-eCCCCcHHHHHHHc-CC-CCCCCCCCCcCCCCEEEEe
Confidence 468999999666665 67899999999975 88 6999999999999999973
No 35
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.45 E-value=0.00012 Score=69.21 Aligned_cols=53 Identities=17% Similarity=0.433 Sum_probs=45.8
Q ss_pred cccEEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEec
Q 000981 10 TRHSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1202)
Q Consensus 10 ~~~~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~ 65 (1202)
....|+|. .||+.++++ +++++|||+.|++. |+. ++.+|+ .|.||.|.|.|..
T Consensus 2 ~~~~v~~~~~~g~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 2 TGIKVFFVTPEGREIMIE-GNEGDSILDLAHAN-NID-LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp CCEEEEEECTTCCEEEEE-ECTTCBHHHHHHHT-TCC-CCCTTTTSSCCSTTEEEECH
T ss_pred CceEEEEEeCCCCEEEEE-ECCCCHHHHHHHHc-CCC-cCcCCCCCCCcCCCEEEECC
Confidence 45678999 999777776 68999999999975 888 999999 7999999999854
No 36
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=97.40 E-value=0.0002 Score=66.77 Aligned_cols=50 Identities=16% Similarity=0.332 Sum_probs=42.5
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
.+|+|..++..++++ +++++|||+.|++. |+. ++.+|+.|.||.|.|.|.
T Consensus 3 ~~v~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 52 (97)
T 1a70_A 3 YKVTLVTPTGNVEFQ-CPDDVYILDAAEEE-GID-LPYSCRAGSCSSCAGKLK 52 (97)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSCSSTTEEEEE
T ss_pred EEEEEEeCCceEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCeEEEc
Confidence 468888877666665 67899999999975 887 999999999999999983
No 37
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.35 E-value=0.00012 Score=68.40 Aligned_cols=50 Identities=20% Similarity=0.401 Sum_probs=43.3
Q ss_pred cEEEEEEC---CEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVN---GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vN---g~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
+++++++| |..++++ ++++++||+.||+. |+. .+.+|+.|.||.|.|.|.
T Consensus 3 ~~~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 55 (98)
T 1jq4_A 3 RVHTITAVTEDGESLRFE-CRSDEDVITAALRQ-NIF-LMSSCREGGCATCKALCS 55 (98)
T ss_dssp CEEEEEEEETTTEEEEEE-EESCCTHHHHHHHH-TCC-CCCSCCSSCCCCCCBCEE
T ss_pred CcEEEEEEecCCCcEEEE-eCCCChHHHHHHHc-CCC-CcCCCCCCCCCCCEEEEE
Confidence 46788888 8777776 68999999999975 887 999999999999999883
No 38
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.26 E-value=0.00039 Score=64.29 Aligned_cols=49 Identities=18% Similarity=0.451 Sum_probs=42.3
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
..|+|..||..++++ +++++|||+.|++. | ..+.+|+.|.||.|.|.|.
T Consensus 2 ~~V~~~~~~~~~~~~-~~~g~tlL~a~~~~-g--~i~~~C~~G~Cg~C~v~v~ 50 (93)
T 1wri_A 2 YKVTLKTPDGDITFD-VEPGERLIDIGSEK-A--DLPLSCQAGACSTCLGKIV 50 (93)
T ss_dssp EEEEEEETTEEEEEE-ECTTSCHHHHHHHH-S--CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEEECCCeEEEE-ECCCCcHHHHHHHC-c--CCCCCCCCCCCCCCEEEEe
Confidence 368888888666776 68999999999976 7 8999999999999999983
No 39
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=97.26 E-value=0.00049 Score=63.74 Aligned_cols=49 Identities=14% Similarity=0.335 Sum_probs=41.5
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
+|+|..++..++++ +++++|||+.|++. |+ .++.+|+.|.||.|.|.|.
T Consensus 2 ~v~~~~~~g~~~~~-~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 50 (94)
T 1awd_A 2 KVTLKTPSGEETIE-CPEDTYILDAAEEA-GL-DLPYSCRAGACSSCAGKVE 50 (94)
T ss_dssp EEEEEETTEEEEEE-CCTTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCCcEEEE-ECCCCcHHHHHHHc-CC-CCCcCCCCCcCCCCEEEEE
Confidence 58888766566776 78999999999975 88 5999999999999999983
No 40
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.16 E-value=0.00046 Score=63.93 Aligned_cols=77 Identities=21% Similarity=0.408 Sum_probs=52.5
Q ss_pred cEEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEecc--CCCcC-CC-----Cceeeceec
Q 000981 12 HSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKY--NPELD-QL-----EDFTISSCL 82 (1202)
Q Consensus 12 ~~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~--~~~~~-~~-----~~~~v~sCl 82 (1202)
.+|+|. .|| ..+++ +++++|||+.|++. |+ ....+|+.|.||.|.|.|..- +.... .+ ....+.+|.
T Consensus 2 ~~v~~~~~~g-~~~~~-~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~ 77 (95)
T 1frr_A 2 YKTVLKTPSG-EFTLD-VPEGTTILDAAEEA-GY-DLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCI 77 (95)
T ss_dssp EEEEEEETTE-EEEEE-ECTTCCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTT
T ss_pred eEEEEEeCCC-cEEEE-eCCCCcHHHHHHHc-CC-CCCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeE
Confidence 368886 788 45554 57899999999875 87 499999999999999998532 11100 00 112577888
Q ss_pred cccccccCceEE
Q 000981 83 TLLCSVNGCLIT 94 (1202)
Q Consensus 83 ~~~~~~~g~~i~ 94 (1202)
..+.. +..|.
T Consensus 78 ~~~~~--~~~v~ 87 (95)
T 1frr_A 78 AIPES--DLVIE 87 (95)
T ss_dssp CEESS--CEEEE
T ss_pred CEECC--CEEEE
Confidence 87543 54444
No 41
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=97.08 E-value=0.00063 Score=63.50 Aligned_cols=50 Identities=20% Similarity=0.380 Sum_probs=41.0
Q ss_pred cEEEEEECC--EEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVNG--EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vNg--~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
..|+|..|+ +..+++ +++++|||+.|++. |+. ...+|+.|.||.|.|.|.
T Consensus 3 ~~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1frd_A 3 YQVRLINKKQDIDTTIE-IDEETTILDGAEEN-GIE-LPFSCHSGSCSSCVGKVV 54 (98)
T ss_dssp EEEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred eEEEEEeCCCCCCEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCCCCCCCEEEEE
Confidence 468888854 255665 57899999999874 886 999999999999999984
No 42
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=96.96 E-value=0.0013 Score=75.04 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=97.7
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (1202)
..+++|+|.+|+.++++.... .+-...+++|||++..-.. .....+||+++ |+.|+.+++.+++||++++.+|.+
T Consensus 50 ~~vv~P~s~eev~~~l~~a~~-~~~pv~~~GgGtnl~~~~~-~~~gvvI~l~~---m~~i~id~~~v~v~aGv~~~~l~~ 124 (326)
T 1hsk_A 50 DFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVSR 124 (326)
T ss_dssp EEEECCSSHHHHHHHHHHHHH-TTCCEEEESSCSSEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHH-cCCCEEEECCCCccccCCC-CCCeEEEEeCC---CCceEEcCCEEEEeCCCcHHHHHH
Confidence 357899999999988873211 2456889999999865221 12468899986 667766778999999999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCcccccc-CCCCCCchHHHHHhcCcEEEEEeCCc-eEEEeh
Q 000981 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ-RKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (1202)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~-p~~~~SD~~~~L~al~A~v~i~s~~g-~R~vpl 398 (1202)
.+.++. ++. +..++.. -+||||++++.. ..+ ..+.=.++ .+++...+| .++++-
T Consensus 125 ~l~~~G----------l~g----Le~~~~~----PgtvGG~i~~naggyG--~~~~d~v~----~v~vv~~~G~i~~~~~ 180 (326)
T 1hsk_A 125 VARDYA----------LTG----LEFACGI----PGSIGGAVYMNAGAYG--GEVKDCID----YALCVNEQGSLIKLTT 180 (326)
T ss_dssp HHHHTT----------EES----CGGGTTC----CSBHHHHHHHTCEETT--EEHHHHEE----EEEEECTTSCEEEEET
T ss_pred HHHHCC----------Ccc----ccccCCC----cchhhHHHhcccccCc--hhhhhhEE----EEEEEeCCCCEEEECh
Confidence 876541 100 0011211 158999997643 332 12221111 456666777 477777
Q ss_pred hhhhc---CCCC-CCCceEEEEEcCCCC
Q 000981 399 EEFLE---RPPL-DSRSILLSVEIPCWD 422 (1202)
Q Consensus 399 ~dF~~---~~~l-~~~eii~~I~iP~~~ 422 (1202)
++++. ...| ..+.||+++.+...+
T Consensus 181 ~~~~~gyr~~~l~s~ggIIt~~~l~l~p 208 (326)
T 1hsk_A 181 KELELDYRNSIIQKEHLVVLEAAFTLAP 208 (326)
T ss_dssp TTTTCBTTBCHHHHTTCEEEEEEEECEE
T ss_pred HHcCCCccccccCCCCEEEEEEEEEEEc
Confidence 77543 2222 235899999987654
No 43
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=96.86 E-value=0.0011 Score=61.96 Aligned_cols=50 Identities=22% Similarity=0.470 Sum_probs=40.1
Q ss_pred cEEEEEECCE--EEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 12 HSVVFAVNGE--KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 12 ~~i~~~vNg~--~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
..|+|..++. ..+++ +++++|||+.|++. |+. +..+|+.|.||.|.|.+.
T Consensus 3 ~~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1czp_A 3 FKVTLINEAEGTKHEIE-VPDDEYILDAAEEQ-GYD-LPFSCRAGACSTCAGKLV 54 (98)
T ss_dssp EEEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred eEEEEEeCCCCCcEEEE-eCCCCCHHHHHHHc-CCC-ccCCCCCCCCCCCeEEEc
Confidence 4677877532 44554 57899999999975 887 999999999999999984
No 44
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=96.79 E-value=0.0013 Score=62.10 Aligned_cols=80 Identities=23% Similarity=0.413 Sum_probs=59.0
Q ss_pred EEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEeccC-----C----C----c--CCCCc
Q 000981 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKYN-----P----E----L--DQLED 75 (1202)
Q Consensus 13 ~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~~~-----~----~----~--~~~~~ 75 (1202)
+|+|. .||+.++++ +.++++|++.|++. |+.|....|+ .|.||.|.|.|..-. + + + ..+..
T Consensus 2 ~vt~~~~~G~~~~~~-~~~g~tll~a~~~~-gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~ 79 (104)
T 3lxf_A 2 AILVTTRDGTRTEIQ-AEPGLSLMEALRDA-GIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTP 79 (104)
T ss_dssp EEEEECTTSCEEEEE-CCTTSBHHHHHHHT-TCTTCCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCCT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHc-CCCCCCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccCC
Confidence 46665 589999997 79999999999975 9999999999 999999999986531 0 0 0 12223
Q ss_pred eeeceeccccc-cccCceEE
Q 000981 76 FTISSCLTLLC-SVNGCLIT 94 (1202)
Q Consensus 76 ~~v~sCl~~~~-~~~g~~i~ 94 (1202)
-.+.+|.+.+. .++|..|.
T Consensus 80 g~rLaCq~~~~~dl~gl~v~ 99 (104)
T 3lxf_A 80 HSRLSCQITINDKLEGLEVE 99 (104)
T ss_dssp TEEEGGGCBCCGGGTTCEEE
T ss_pred CcEEEeeCEEccCCCCEEEE
Confidence 35778877654 46777765
No 45
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=96.60 E-value=0.0018 Score=61.30 Aligned_cols=51 Identities=22% Similarity=0.497 Sum_probs=43.6
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEec
Q 000981 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1202)
Q Consensus 13 ~i~~-~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~ 65 (1202)
+|+| ..||+..+++ +.+++|||+.+++. |+.|....|+ .|.||.|.|.|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlLeaa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1xlq_A 2 KVVYVSHDGTRRELD-VADGVSLMQAAVSN-GIYDIVGDCGGSASCATCHVYVNE 54 (106)
T ss_dssp EEEEECTTSCEEEEE-CCTTCBHHHHHHHT-TCTTSCCTTCSSSSSCTTEEEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCCCcCCCCCcccCcCEEEECC
Confidence 5778 5799777776 68999999999865 9999999995 8999999999854
No 46
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=96.57 E-value=0.002 Score=60.93 Aligned_cols=51 Identities=25% Similarity=0.594 Sum_probs=43.5
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEec
Q 000981 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1202)
Q Consensus 13 ~i~~-~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~ 65 (1202)
+|+| ..||+.++++ +.+++|||+.+++. |+.|....|+ .|.||.|.|-|..
T Consensus 2 ~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1uwm_A 2 KIIFIEHNGTRHEVE-AKPGLTVMEAARDN-GVPGIDADCGGACACSTCHAYVDP 54 (106)
T ss_dssp EEEEECTTCCEEEEE-CCTTSBHHHHHHTT-TCTTCCCTTSSSSSSCTTEEEECH
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCcccCCCCCCCcCcCEEEECC
Confidence 5778 5789777776 68999999999865 9989999995 8999999999865
No 47
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=96.50 E-value=0.002 Score=62.97 Aligned_cols=80 Identities=23% Similarity=0.379 Sum_probs=58.2
Q ss_pred EEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEeccC-----C----C------cCCCCc
Q 000981 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKYN-----P----E------LDQLED 75 (1202)
Q Consensus 13 ~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~~~-----~----~------~~~~~~ 75 (1202)
+|+|. .+|+.++++ +.++++|++.|++. |+.|....|+ .|.||.|.|.|..-. + + ...+..
T Consensus 23 ~Vt~~~~~G~~~~v~-~~~G~tLL~aa~~~-gi~gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~~ 100 (126)
T 3hui_A 23 KINFVDHTGETRTVE-VEEGATVMEAAIRN-AIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRP 100 (126)
T ss_dssp EEEEECTTSCEEEEE-EETTSBHHHHHHTT-TCTTCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCCT
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhccC
Confidence 57777 789777776 68999999999975 9999999998 899999999986531 1 0 012223
Q ss_pred eeeceeccccc-cccCceEE
Q 000981 76 FTISSCLTLLC-SVNGCLIT 94 (1202)
Q Consensus 76 ~~v~sCl~~~~-~~~g~~i~ 94 (1202)
-.+.+|.+.+. .++|..|.
T Consensus 101 g~RLaCQ~~~~~dldgl~V~ 120 (126)
T 3hui_A 101 NSRLSCQIKVSNELDGLIVT 120 (126)
T ss_dssp TEEEGGGCBCCGGGTTEEEE
T ss_pred CeEEeeeCEECcCCCcEEEE
Confidence 35778877554 35676654
No 48
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=96.48 E-value=0.0019 Score=61.69 Aligned_cols=50 Identities=12% Similarity=0.357 Sum_probs=39.2
Q ss_pred EEEEEEC-C---EEEEEccCCCCCcHHHHHhhccCCcccccCC-CCCCCCccEEEEec
Q 000981 13 SVVFAVN-G---EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-GEGGCGACVVLLSK 65 (1202)
Q Consensus 13 ~i~~~vN-g---~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC-~~G~CGaCtV~~~~ 65 (1202)
+|+|..| | ...+++ +++++|||+.|++. |+. +..+| +.|.||.|.|.|..
T Consensus 3 ~i~~~~~~g~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~~G~Cg~C~v~v~~ 57 (111)
T 1i7h_A 3 KIVILPHQDLCPDGAVLE-ANSGETILDAALRN-GIE-IEHACEKSCACTTCHCIVRE 57 (111)
T ss_dssp EEEECCBTTTBTTCEEEE-CCTTCBHHHHHHHT-TCC-CCCTTSSSSCCSTTEEEEEE
T ss_pred EEEEEeCCCcCCCCeEEE-eCCCCcHHHHHHHc-CCC-CcccCCCCCcCCCCEEEEcc
Confidence 5788873 2 233454 57899999999975 886 99999 59999999999853
No 49
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=96.47 E-value=0.002 Score=60.82 Aligned_cols=51 Identities=20% Similarity=0.458 Sum_probs=43.2
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEec
Q 000981 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1202)
Q Consensus 13 ~i~~-~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~ 65 (1202)
+|+| ..||+.++++ +.+++|||+.+++. |+.|....|+ .|.||.|.|-|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (105)
T 1b9r_A 2 RVVFIDEQSGEYAVD-AQDGQSLMEVATQN-GVPGIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp EEEECCTTTSCEEEE-CCTTCCTTHHHHHH-TCCCCCCSSTTSSCCCCCCCEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHc-CCCCcCcCCCCCCCcCcCEEEECC
Confidence 5777 5789666776 68899999999875 9999999998 7999999999864
No 50
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=96.05 E-value=0.015 Score=65.96 Aligned_cols=153 Identities=17% Similarity=0.235 Sum_probs=92.5
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (1202)
..++.|.|.+|+.++++.... .+-...+++||+.+.+-.. .....+||+++ |+.|..+++.+++||++++.+|.+
T Consensus 56 ~~vv~P~s~eev~~~v~~a~~-~~~pv~v~GgGsnl~~~~~-~~~gvvI~l~~---~~~I~~d~~~v~v~aG~~~~~l~~ 130 (322)
T 3tx1_A 56 DVFVMPKTIEEAQEVVAYCHQ-NKIPLTILGNGSNLIIKDG-GIRGVILHLDL---LQTIERNNTQIVAMSGAKLIDTAK 130 (322)
T ss_dssp EEEEECSSHHHHHHHHHHHHH-TTCCEEEESCCTTEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCccCCCcCCC-CCCeEEEECCC---CCcEEECCCEEEEecCcCHHHHHH
Confidence 468999999999887752211 2456888999999875221 23467899974 666777788999999999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEEEehh
Q 000981 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLMLE 399 (1202)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~~~~SD~~~~L~al~A~v~i~s~~g-~R~vpl~ 399 (1202)
.+.++.. . -+...+.. -+|+||++++.... +-..+.-.+ -.|++...+| .++++-+
T Consensus 131 ~l~~~Gl----------~----Gle~~~gi----PgTVGGav~~NaGg-yGg~~~d~v----~~vevV~~~G~i~~~~~~ 187 (322)
T 3tx1_A 131 FALNESL----------S----GLEFACGI----PGSIGGALHMNAGA-YGGEISDVL----EAATVLTQTGELKKLKRS 187 (322)
T ss_dssp HHHHTTE----------E----SCGGGTTC----CSBHHHHHHHTCEE-TTEEHHHHE----EEEEEECTTSCEEEEEGG
T ss_pred HHHHcCC----------c----ccccCCCC----cchhHHHHHhCccC-cccchHhhE----EEEEEEcCCCCEEEechH
Confidence 8765411 0 00112222 28999999865431 001222111 1345555556 4556666
Q ss_pred h-hhc-C-CCCC-CCceEEEEEcCCC
Q 000981 400 E-FLE-R-PPLD-SRSILLSVEIPCW 421 (1202)
Q Consensus 400 d-F~~-~-~~l~-~~eii~~I~iP~~ 421 (1202)
| +|. + ..+. .+.||+++.+...
T Consensus 188 ~~~~~yR~s~~g~~~~IIt~~tl~L~ 213 (322)
T 3tx1_A 188 ELKAAYRFSTIAEKNYIVLDATFSLA 213 (322)
T ss_dssp GCC--CC-CTTTGGGCEEEEEEEECE
T ss_pred HcCcchhhcccCCCCEEEEEEEEEEE
Confidence 6 332 2 2222 2458888776553
No 51
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=95.44 E-value=0.047 Score=62.68 Aligned_cols=153 Identities=14% Similarity=0.145 Sum_probs=90.9
Q ss_pred eecC-CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecC----CcEEEc
Q 000981 236 LLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQ----TGIEIG 310 (1202)
Q Consensus 236 ~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~----~~l~IG 310 (1202)
.+.+ -..+++|.|.+|+.++++.... .+-...+++||+.+.+-.. ....+|+++ |+.|+.++ ..+++|
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~-~~ipv~vlGgGSNll~~d~--~~GvVI~l~----~~~i~v~~~~~~~~v~v~ 98 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEW-ASLPKLIIGKGSNMLFTCH--YTGMIVVNR----LNGIEHQQDDDYHRLHVA 98 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTT-TTSCEEEESSCTTEEECSC--EEEEEEEEC----CCCEEEEECSSEEEEEEE
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHH-cCCCEEEECCCcCcccCCC--CCeEEEEcC----CCceEEeccCCceEEEEe
Confidence 3444 4578999999999998873311 2346788999998865322 345788875 45555432 279999
Q ss_pred ccCcHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC-CCC-CCchHHHHHhcCcEEEEE
Q 000981 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR-KHF-PSDVATVLLGAGAMVNIM 388 (1202)
Q Consensus 311 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p-~~~-~SD~~~~L~al~A~v~i~ 388 (1202)
|++++.+|.+.+.++. +. -+...++.+ +||||++++... .+. -+|.+ -.|++.
T Consensus 99 AG~~~~~l~~~a~~~G----------l~----GlE~l~gIP----GtVGGav~~NaGaYG~e~~d~v-------~~vevv 153 (357)
T 3i99_A 99 GGEDWPSLVSWCVEQG----------IG----GLENLALIP----GCAGSAPIQNIGAYGVEFKDVC-------DYVEYL 153 (357)
T ss_dssp TTSBHHHHHHHHHHTT----------CT----TCGGGTTCC----SBGGGTTTTTCEETTEEGGGTE-------EEEEEE
T ss_pred CCCcHHHHHHHHHHcC----------Cc----CccccCCCC----chhHHHHHhchhhhhhhHHhhE-------eEEEEE
Confidence 9999999999866541 10 122233333 799999987644 110 01111 135566
Q ss_pred eC-Cc-eEEEehhhh-hc-CC-CC----CCCceEEEEEcCC
Q 000981 389 TG-QK-CEKLMLEEF-LE-RP-PL----DSRSILLSVEIPC 420 (1202)
Q Consensus 389 s~-~g-~R~vpl~dF-~~-~~-~l----~~~eii~~I~iP~ 420 (1202)
.. +| .++++-+|. |. +. .+ ....||+++.+..
T Consensus 154 ~~~~G~i~~~~~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L 194 (357)
T 3i99_A 154 CLETGTVKRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKF 194 (357)
T ss_dssp ETTTTEEEEEETGGGCCBTTBCGGGTTTTTTEEEEEEEEEE
T ss_pred ECCCCcEEEEeHHHcCcccccccCCCccCCCEEEEEEEEEE
Confidence 65 55 466776663 32 21 12 1244677665543
No 52
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=95.14 E-value=0.012 Score=75.09 Aligned_cols=104 Identities=23% Similarity=0.388 Sum_probs=70.9
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCC------CCCCCCccEEEEecc--CCC-------cCC----C
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC------GEGGCGACVVLLSKY--NPE-------LDQ----L 73 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC------~~G~CGaCtV~~~~~--~~~-------~~~----~ 73 (1202)
+|+|+|||+.+++. +++|||+.++. .|+. .-.-| ..|.|+.|.|.|... +.+ .|+ .
T Consensus 1 mv~i~idg~~~~v~---~g~til~a~~~-~gi~-ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~ 75 (783)
T 3i9v_3 1 MVRVKVNDRIVEVP---PGTSVMDAVFH-AGYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQW 75 (783)
T ss_dssp CEEEECSSCEEEEC---TTCBHHHHHHH-TTCC-CCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCB
T ss_pred CeEEEECCEEEEeC---CCChHHHHHHH-hCCC-ccccCCCCCCCCCcccCCcEEEeccccccccccccccccccccccc
Confidence 47899999987774 79999999986 3643 23345 899999999999421 110 010 0
Q ss_pred CceeeceeccccccccCceEEEeecCCCCCCCcch----HHHHHHhcCCCCCCCCChHHH
Q 000981 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHP----IHQRFAGFHASQCGFCTPGMC 129 (1202)
Q Consensus 74 ~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtPG~v 129 (1202)
..+.+.||.+++. +|..|.|- ...... +-+-|..+|-.-|..|..|==
T Consensus 76 ~~~~~~aC~t~v~--~gm~v~t~------~~~~~~~r~~~le~ll~nhp~dC~~C~~~g~ 127 (783)
T 3i9v_3 76 QPKLAASCVTAVA--DGMVVDTL------SDVVREAQAGMVEFTLLNHPLDCPTCDKGGA 127 (783)
T ss_dssp CSSCEETTTCBCC--SSEEEESS------SHHHHHHHHHHHHHHHTSCCCCTTTCTTGGG
T ss_pred CCCcccccCCCCC--CCCEEEEC------CHHHHHHHHHHHHHHHhcCCCCCccCCCCCC
Confidence 2367899999976 69999973 122222 344456788889999988643
No 53
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=95.03 E-value=0.68 Score=58.88 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=45.9
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCC
Q 000981 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAI 844 (1202)
Q Consensus 788 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~ 844 (1202)
..++.+..+.||.++|+++++.. ..+.+.+|+.||||.++|+|... .-+|.+|++.+
T Consensus 500 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t 567 (803)
T 1ffv_B 500 FDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRST 567 (803)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHH
Confidence 46678888889999999998655 45778999999999999999864 44677777754
No 54
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=94.98 E-value=0.0093 Score=70.42 Aligned_cols=102 Identities=11% Similarity=0.179 Sum_probs=71.9
Q ss_pred eEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHHH
Q 000981 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1202)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 321 (1202)
.+++|+|.+|+.++++.. ...++++|||+....-.......+||++++.....|..++..++++|++++.+|.+.
T Consensus 23 ~v~~P~s~~ev~~~v~~a-----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~ 97 (422)
T 2vfr_A 23 ELLRPHSLDALRALVADS-----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELARV 97 (422)
T ss_dssp SCBCCSSHHHHHHHHHHC-----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHhC-----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHHH
Confidence 467999999999999842 568888999876542111235689999875544444444678999999999999998
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCcccccc
Q 000981 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (1202)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~ 366 (1202)
+.++.. .+..+.--+.+||||+|++..
T Consensus 98 l~~~Gl------------------~l~~~~~~~~~tvGG~i~~~~ 124 (422)
T 2vfr_A 98 VHARGL------------------ALPNMASLPHISVAGSVATGT 124 (422)
T ss_dssp HHHTTE------------------ECSCCCSSSCSBHHHHHHHTC
T ss_pred HHHcCC------------------cccCCCCCCCeeHHHHHhcCC
Confidence 776511 122223336689999999863
No 55
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=94.95 E-value=0.013 Score=57.52 Aligned_cols=48 Identities=15% Similarity=0.380 Sum_probs=39.3
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
.|+|.+||+. +++ +++++|||+.|++. |+. ...+|+.|.||.|.|-|.
T Consensus 29 ~i~i~~~g~~-~v~-v~~g~tlL~aa~~~-Gi~-i~~~C~~G~CgtC~v~v~ 76 (128)
T 1doi_A 29 DMDLDDEDYG-SLE-VNEGEYILEAAEAQ-GYD-WPFSCRAGACANCAAIVL 76 (128)
T ss_dssp HSCCCTTTEE-EEE-CCTTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCcE-EEE-ECCCCcHHHHHHHc-CCC-CccCCCccCCCCCEeEEe
Confidence 4678889962 444 56899999999864 875 899999999999999884
No 56
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=94.92 E-value=0.062 Score=64.40 Aligned_cols=155 Identities=12% Similarity=0.044 Sum_probs=95.5
Q ss_pred ceEEecCCHHHHHHHHhhccCCC--CCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSN--QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~--~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (1202)
..+++|.|.+|+.++++.... . +-...+++||++++-.- ......+||++++..+..+..+...++++|++++.+|
T Consensus 44 ~~vv~P~s~eev~~~v~~a~~-~~~~~~v~~~G~G~s~~~~~-~~~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~L 121 (481)
T 4feh_A 44 ANVLRTPDAEMIVKAVARVAE-SGGGRGAIARGLGRSYGDNA-QNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQL 121 (481)
T ss_dssp EEEEECSCHHHHHHHHHHHHT-TTCTTCEEEECSSCSSSSTT-CCTTSEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHH-cCCCceEEEEeCCcCCCCCC-CCcCeEEEECccCCCceEEcCCCCEEEEcCCccHHHH
Confidence 467899999999988764321 1 24678899999873110 0135689999886544444445568999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCC------CCCCchHHHHHhcCcEEEEEeCCc
Q 000981 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQK 392 (1202)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~------~~~SD~~~~L~al~A~v~i~s~~g 392 (1202)
.+.+.++... ++. .+.+ .-+||||+|++..-. +..+|.+ -.++++..+|
T Consensus 122 ~~~l~~~Gl~--------l~~---------~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V-------~~~evV~~dG 176 (481)
T 4feh_A 122 MKAALPFGLW--------VPV---------LPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHV-------RSMDLLTADG 176 (481)
T ss_dssp HHHHGGGTEE--------CSC---------CCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGE-------EEEEEECTTS
T ss_pred HHHHHHcCCE--------EEE---------eCCc-CccccCCccccccCCCCcccCCCccceE-------eEEEEEeCCC
Confidence 9987654110 110 1223 256999999985432 1112211 2456666666
Q ss_pred -eEEEehh----hhhc--CCCCCCCceEEEEEcCCCC
Q 000981 393 -CEKLMLE----EFLE--RPPLDSRSILLSVEIPCWD 422 (1202)
Q Consensus 393 -~R~vpl~----dF~~--~~~l~~~eii~~I~iP~~~ 422 (1202)
.+++.-+ |.|. ...+..-.||+++.|...+
T Consensus 177 ~v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p 213 (481)
T 4feh_A 177 EIRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTP 213 (481)
T ss_dssp CEEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEE
T ss_pred CEEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEe
Confidence 4555544 5442 3345556699998886543
No 57
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=94.83 E-value=0.02 Score=54.29 Aligned_cols=50 Identities=18% Similarity=0.448 Sum_probs=39.7
Q ss_pred EEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccc--cCCCC-CCCCccEEEEec
Q 000981 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK--LGCGE-GGCGACVVLLSK 65 (1202)
Q Consensus 13 ~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k--~gC~~-G~CGaCtV~~~~ 65 (1202)
+|+|. -+|+.++++ +.++++||+.+++. |+. .. ..|+. |.||.|.|.|.+
T Consensus 8 ~V~~~~~~g~~~~v~-~~~g~tLL~aa~~~-gi~-i~~~~~Cgg~G~CgtC~v~v~~ 61 (108)
T 2bt6_A 8 TVHFINRDGETLTTK-GKIGDSLLDVVVQN-NLD-IDGFGACEGTLACSTCHLIFEQ 61 (108)
T ss_dssp EEEEECTTSCEEEEE-EETTCBHHHHHHHT-TCC-CTTTTTTSSSSSBSTTEEECCH
T ss_pred EEEEECCCCCEEEEE-ECCCChHHHHHHHc-CCC-CCcccCCCCCcCcCCCEEEECc
Confidence 45555 469877886 68999999999864 664 66 89975 999999999864
No 58
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=94.82 E-value=0.032 Score=52.89 Aligned_cols=79 Identities=24% Similarity=0.450 Sum_probs=53.7
Q ss_pred EEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCC-CCCCccEEEEecc--C---CC----------cCCCCc
Q 000981 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLSKY--N---PE----------LDQLED 75 (1202)
Q Consensus 13 ~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~-G~CGaCtV~~~~~--~---~~----------~~~~~~ 75 (1202)
+|+|. -||+.++++ +.++.+||+.+++. |+. ....|+. |.||.|.|-|..- + +. ...+..
T Consensus 7 ~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~-i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~ 83 (109)
T 2y5c_A 7 NVVFVDRSGQRIPVS-GRVGDNVLHLAQRH-GVD-LEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQE 83 (109)
T ss_dssp EEEEECTTSCEEEEE-EETTCBHHHHHHHT-TCC-CCCTTSSSSSCCTTEEEECHHHHTTSCCCCHHHHHHHHTSTTCCT
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCcCCCCCcCcCccEEEECCcchhhcCCCCHHHHHHHhccccCCC
Confidence 45553 489987786 68899999999864 765 7889987 9999999998542 1 10 012223
Q ss_pred eeeceecccccc-ccCceEE
Q 000981 76 FTISSCLTLLCS-VNGCLIT 94 (1202)
Q Consensus 76 ~~v~sCl~~~~~-~~g~~i~ 94 (1202)
-.+.+|.+.+.. ++|..|.
T Consensus 84 g~rLaCq~~~~~d~~~~~v~ 103 (109)
T 2y5c_A 84 NSRLGCQIVLTPELEGAEFT 103 (109)
T ss_dssp TEEEGGGCBCCGGGTTCEEE
T ss_pred CcEeeEEeEEecCCCeEEEE
Confidence 346788876543 5566654
No 59
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=94.76 E-value=0.024 Score=70.72 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=75.6
Q ss_pred eEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE--eee--cccCCeeeeCCCcccccceeecCCcEEEcccCcHHH
Q 000981 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKE--VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1202)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~--~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1202)
-.++|.|.+|..++++-... .+-.....+|||++.- ... ....-++||++++.....|..++..++++|+|++.+
T Consensus 208 aVV~P~s~eeV~~iv~~A~~-~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~ 286 (658)
T 4bby_A 208 IVLWPTCHDDVVKIVNLACK-YNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQE 286 (658)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred EEEeeCCHHHHHHHHHHHHH-CCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHH
Confidence 57899999999988762210 1335667899998743 111 112347899998766555666677999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000981 318 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p 367 (1202)
|.+.|+++...++ -.++=...+||||||++.+.
T Consensus 287 L~~~L~~~Gl~lp-----------------~dP~S~~~aTIGG~iAtna~ 319 (658)
T 4bby_A 287 LERQLKESGYCTG-----------------HEPDSLEFSTVGGWISTRAS 319 (658)
T ss_dssp HHHHHHHHTEECC-----------------CCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHHHcCCccC-----------------CCCCCccccEEeehhhcCCC
Confidence 9999887632111 13455678999999998765
No 60
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=94.01 E-value=0.041 Score=67.58 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=71.6
Q ss_pred eEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE--eeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHHH
Q 000981 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (1202)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (1202)
..++|+|.+|+.++++-... .+-...+.+|||++.- .... ....++||++++..+..|..++..++++|++++.+|
T Consensus 140 ~vv~P~s~eeV~~iv~~a~~-~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l 218 (584)
T 2uuu_A 140 LIVLPHSHEEVERLVQLAHK-YNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPEL 218 (584)
T ss_dssp EEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHH
Confidence 57899999999887762210 1346788899999752 1211 123467999876544444444568999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000981 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p 367 (1202)
.+.+.++... + -..+.-...+||||++++..-
T Consensus 219 ~~~l~~~Gl~--------~---------~~~p~s~~~~tvGG~ia~na~ 250 (584)
T 2uuu_A 219 EKQLHKQGVS--------L---------GHDPDSFEFSTLGGWLATCSS 250 (584)
T ss_dssp HHHHHHTTEE--------C---------CCCCTTGGGCBHHHHHHHTCC
T ss_pred HHHHHHcCCe--------e---------CcCCCccCCeeEeeeccCCCC
Confidence 9987765211 1 011222355899999998765
No 61
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=93.91 E-value=0.043 Score=65.74 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=73.2
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE--eeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (1202)
..+++|+|.+|+.++++-... .+-...+.+|||++.- .. .....+||++++.....|..++..++++|++++.+|
T Consensus 53 ~~vv~P~s~eeV~~~v~~a~~-~~~pv~~~GgGt~~~g~~~~--~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l 129 (476)
T 3pm9_A 53 PLVLRPGSTEEVVAICKLANE-ARVALVPQGGNTGLVGGQTP--HNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRV 129 (476)
T ss_dssp SCEECCCSHHHHHHHHHHHHH-HTCCEEEESSSCCSSSTTCC--CSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCccC--CCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHH
Confidence 357899999999887762211 1346788899998742 11 123689999986555455556778999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000981 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p 367 (1202)
.+.+.++...++ -.+.-...+||||++++...
T Consensus 130 ~~~l~~~Gl~~~-----------------~~~~s~~~~tvGG~ia~nag 161 (476)
T 3pm9_A 130 QEKAAEVDRLFP-----------------LSLGAQGSCTIGGNLSTNAG 161 (476)
T ss_dssp HHHHHHTTEECC-----------------CCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHHhCCccC-----------------CCCCCCCcEEEccccCCCCC
Confidence 998776521100 12233557999999986654
No 62
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=93.38 E-value=0.18 Score=60.96 Aligned_cols=155 Identities=11% Similarity=0.089 Sum_probs=91.4
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccce-E-eeecc--cCCeeeeCC-Ccccccceeec--CCcEEEcccC
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-Y-YKEVE--HYDKYIDIR-YIPELSVIRRD--QTGIEIGATV 313 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lg-v-~k~~~--~~~~lIdl~-~I~EL~~I~~~--~~~l~IGA~v 313 (1202)
..++.|+|.+|+.++++.... .+-..++++||+++. + ...+. ....+||++ ++..+ .|..+ ...+++||++
T Consensus 31 ~~vv~P~s~eEV~~~Vk~A~~-~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-~vD~~~~~~tVtV~AGv 108 (540)
T 3js8_A 31 VWTCAPRSADEVVKVANWAKD-NGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-SIDASGPVAKVTAQAGI 108 (540)
T ss_dssp EEEECCSSHHHHHHHHHHHHH-HTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-EEECSSSSEEEEEETTS
T ss_pred cEEEEcCCHHHHHHHHHHHHH-cCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCE-EECCCCCccEEEEccCC
Confidence 467899999999988763211 235678889999874 2 11211 234689995 55544 33332 2489999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-ccccccccccCCcccccc-CC---------------CCCCchHH
Q 000981 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQ-RK---------------HFPSDVAT 376 (1202)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iA-s~qIRN~aTiGGNl~~a~-p~---------------~~~SD~~~ 376 (1202)
++.+|.+.|.++.- .+. .+.+ ..+||||.|++.. .. +..+|
T Consensus 109 ~l~~L~~~L~~~GL------------------~l~~~~gi-~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D--- 166 (540)
T 3js8_A 109 TMEALLTGLEKAGL------------------GVTAAPAP-GDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISN--- 166 (540)
T ss_dssp BHHHHHHHHHHTTE------------------ECSCCCSC-SCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGG---
T ss_pred CHHHHHHHHHHcCC------------------EEEecCCC-CCeEEcccccCCCCcccccccccccccccccccHHH---
Confidence 99999998776511 011 1223 4589999997643 21 22233
Q ss_pred HHHhcCcEEEEEeCC----ceEEEehh--hhhc-CCCCCCCceEEEEEcCCCC
Q 000981 377 VLLGAGAMVNIMTGQ----KCEKLMLE--EFLE-RPPLDSRSILLSVEIPCWD 422 (1202)
Q Consensus 377 ~L~al~A~v~i~s~~----g~R~vpl~--dF~~-~~~l~~~eii~~I~iP~~~ 422 (1202)
..++.+|++.++. ..+++.-+ ||+. ...+..+ ||+++.+...+
T Consensus 167 --~V~~levV~adG~~~~~~i~~~s~~~~DL~a~r~G~G~g-IVTevtlrl~P 216 (540)
T 3js8_A 167 --LVLSLTAVVYDKASGAYALRKFARNDPQIAPLLAHVGRS-LIVEATLQAAP 216 (540)
T ss_dssp --GEEEEEEEEEETTTTEEEEEEEETTSGGGHHHHTCTTSS-CEEEEEEEEEE
T ss_pred --hEEEEEEEcCCCCCceeeEEEeCCCChhHHHHHhcCCCe-EEEEEEEEEEE
Confidence 2344444444443 24555532 4442 2233455 99999886543
No 63
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=93.36 E-value=0.05 Score=66.45 Aligned_cols=109 Identities=24% Similarity=0.126 Sum_probs=69.4
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE--eeec---ccCCeeeeCCCcccccceeecCCcEEEcccCcH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (1202)
...++|.|.+|+.++++-... .+-...+.+|||++.- .... .+..++||++++..+..|. ++..++++|++++
T Consensus 47 ~~Vv~P~s~~eV~~iv~~a~~-~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l 124 (571)
T 1f0x_A 47 LAVVFPGSLLELWRVLKACVT-ADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTL 124 (571)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBH
T ss_pred cEEEeeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCH
Confidence 357899999999988763211 2345777899999742 1111 1135899998854433333 2458999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000981 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p 367 (1202)
.+|.+.+.++..+++. .+++.. ..+||||+|++.+.
T Consensus 125 ~~L~~~l~~~Gl~~p~--------------~~g~s~--~~~tvGG~ia~nag 160 (571)
T 1f0x_A 125 YSLEKALKPLGREPHS--------------VIGSSC--IGASVIGGICNNSG 160 (571)
T ss_dssp HHHHHHHGGGTEECSC--------------CCGGGG--GTCBHHHHHHTTCC
T ss_pred HHHHHHHHhcCccCCc--------------CCCccC--CCceecccccCCCC
Confidence 9999987765211110 011111 36799999988765
No 64
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=93.12 E-value=0.099 Score=49.79 Aligned_cols=42 Identities=31% Similarity=0.684 Sum_probs=33.3
Q ss_pred CCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEec
Q 000981 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1202)
Q Consensus 19 Ng~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~~ 65 (1202)
||+.++ +.+++|||+.+++. |+. ....|+ .|.||.|.|-|..
T Consensus 15 ~~~~v~---~~~g~tlL~aa~~~-Gi~-i~~~C~g~G~CgtC~v~v~~ 57 (113)
T 3ah7_A 15 EGLTVE---VKPGTNILELAHDH-HIE-MESACGGVKACTTCHCIVRK 57 (113)
T ss_dssp TCEEEE---CCTTCBHHHHHHHT-TCC-CCCTTCSSSSCSTTEEEEEE
T ss_pred CCeEEE---ECCCCcHHHHHHHc-CCC-CCcCCCCCCCcCCCEEEEcC
Confidence 445444 56899999999864 775 889998 6999999998853
No 65
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=92.94 E-value=0.079 Score=60.29 Aligned_cols=48 Identities=21% Similarity=0.446 Sum_probs=38.2
Q ss_pred EEEEEC---CEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 14 VVFAVN---GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 14 i~~~vN---g~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
.+++++ |...+++ +++++|||+.+++. |+. ....|+.|.||.|.|.|.
T Consensus 4 ~~v~~~~~~~~~~~~~-~~~g~tll~a~~~~-gi~-i~~~C~~g~Cg~C~v~v~ 54 (338)
T 1krh_A 4 HQVALQFEDGVTRFIC-IAQGETLSDAAYRQ-QIN-IPMDCREGECGTCRAFCE 54 (338)
T ss_dssp EEEEEECTTSCEEEEE-ECTTCCHHHHHHHT-TCC-CSCSCSSSSSCTTEEEEE
T ss_pred eEEEEEEcCCCcEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCEEEEe
Confidence 344555 6666675 57899999999864 775 889999999999999884
No 66
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=92.88 E-value=0.083 Score=64.61 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=70.1
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeec---ccCCeeeeC-CCcccccceeecCCcEEEcccCcHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV---EHYDKYIDI-RYIPELSVIRRDQTGIEIGATVTIS 316 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~---~~~~~lIdl-~~I~EL~~I~~~~~~l~IGA~vTl~ 316 (1202)
.-.++|.|.+|+.++++-... .+-...+.+|||++.+ ... .....+||+ +++.....|..++..+++++++++.
T Consensus 72 ~~Vv~P~s~~eV~~iv~~a~~-~~~pv~~~g~Gt~~~~-gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~ 149 (560)
T 1e8g_A 72 SAIVAPRNVADVQSIVGLANK-FSFPLWPISIGRNSGY-GGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYH 149 (560)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTT-TTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHH
T ss_pred cEEEeCCCHHHHHHHHHHHHH-cCCcEEEecCCCcCCc-CCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHH
Confidence 457899999999887762210 1234566789998754 110 124689999 7654333334446689999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-ccccccccccCCccccccC
Q 000981 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iA-s~qIRN~aTiGGNl~~a~p 367 (1202)
+|.+.+.++... . .+. .+.-.+.+|+|||+++...
T Consensus 150 ~l~~~l~~~Gl~---------~-------~~~~~p~~~~~~tigG~~~~~g~ 185 (560)
T 1e8g_A 150 DLHNYLEANNLR---------D-------KLWLDVPDLGGGSVLGNAVERGV 185 (560)
T ss_dssp HHHHHHHHTTCT---------T-------TEECCCCSSTTSBHHHHHHTTCB
T ss_pred HHHHHHHHcCCc---------c-------ccCCCCCCCCccchhhhccCCCC
Confidence 999987765210 0 011 2344458999999876543
No 67
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=92.19 E-value=1.6 Score=56.19 Aligned_cols=187 Identities=17% Similarity=0.149 Sum_probs=120.1
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHh---CCCCccEEEEE------cccCCCCCCCCCCccHHHH
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCL---GIPEHNVRVIT------RRVGGAFGGKAIKAMPVAT 851 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~L---glp~~kV~V~~------~~vGGgFGgK~~~~~~~~~ 851 (1202)
+...++.+..+.||.++|+++++.. ..+.+.+|+.| |||.++|+|.. +.-+|.+|++.+.. ...
T Consensus 631 ~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~--~G~ 708 (907)
T 1dgj_A 631 PDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVV--TGN 708 (907)
T ss_dssp SCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTTH--HHH
T ss_pred CCCccEEEEEeCCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHH--HHH
Confidence 3456788888889999999998655 45678899999 99999999986 45578889987643 233
Q ss_pred HHHHHHHhcC---CCEE-EEeChHHHHhh--------------------cCC-CC----ce-EEEEEEEeCCC-CcEEEE
Q 000981 852 ACALAAYKLC---RPVR-IYVKRKTDMIM--------------------VGG-RH----PM-KITYSVGFKSN-GKITAL 900 (1202)
Q Consensus 852 ~aAlaA~~~g---RPVk-l~~tR~edm~~--------------------~~~-R~----~~-~~~~k~g~~~d-G~i~a~ 900 (1202)
++-.||.+++ +++. -.+ ..|++.. ++. .+ ++ ..-.++-+|.+ |++.=.
T Consensus 709 Av~~Aa~~l~~~l~~~aa~~l-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aEVeVD~~TG~v~V~ 787 (907)
T 1dgj_A 709 AIRVACEMLIEGMRKPGGGFF-TPAEMKAEGRPMRYDGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVE 787 (907)
T ss_dssp HHHHHHHHHHHHTBCSSSSBC-CHHHHHHTTCCCEEEEEEECSCBCCCTTSCSBCCSEEEEEEEEEEEEEETTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhcC-CHHHHhhCCeEEEecceeeccCCCcCCCCCCCCCCCCceEEEEEEEEEECCCCcEEEE
Confidence 3344444442 1110 000 1222220 011 11 22 23467778864 999999
Q ss_pred EEEEEeeCCCCCCCCc----c-------hhhh---------ccccCCCCccCcE----E-EEEEEeecCCCCCCcc--CC
Q 000981 901 QLNILIDAGLSPDVSP----I-------MPSN---------MIGALKKYDWGAL----H-FDIKVCRTNLPSRSAM--RA 953 (1202)
Q Consensus 901 ~~~~~~d~Ga~~~~s~----~-------~~~~---------~~~~~~~Y~ipn~----~-~~~~~v~TN~~~~ga~--RG 953 (1202)
++....|.|-..+-.. + +..+ ......-|.+|.. . ++...+.++.+ .++| +|
T Consensus 788 r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~G~~~~~~~~dY~ip~~~D~P~~i~v~~~e~~~~-~~p~GaKG 866 (907)
T 1dgj_A 788 KMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDLKKHSTMGGAGIPSIKMIPDDIEIVYVETPRK-DGPFGASG 866 (907)
T ss_dssp EEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTTTTSSTTTTTCCCGGGSCSCEEEEECCCCCT-TSGGGBCC
T ss_pred EEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCCChhhCcCCChHHCCCcEEEEEecCCCC-CCCCCCcc
Confidence 9999999997765211 0 0000 1112345766653 2 67777887655 4676 79
Q ss_pred CChhHHHHHHHHHHHHHHHHcCC
Q 000981 954 PGEVQGSFIAEAVIEHVASTLSM 976 (1202)
Q Consensus 954 ~G~~q~~fa~E~~mDelA~~lg~ 976 (1202)
.|.+...-+.=.+.+.+.+.+|.
T Consensus 867 vGE~~~~~~~~AIaNAv~~A~G~ 889 (907)
T 1dgj_A 867 VGEMPLTAPHAAIINGIYNACGA 889 (907)
T ss_dssp CTTGGGSSHHHHHHHHHHHHHSC
T ss_pred cCccccchHHHHHHHHHHHhhCC
Confidence 99988877777888888888885
No 68
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=91.78 E-value=0.88 Score=57.60 Aligned_cols=188 Identities=17% Similarity=0.154 Sum_probs=116.1
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCCCccHHHHHHH
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACA 854 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aA 854 (1202)
++..++.+..+.||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+.. ...++-
T Consensus 457 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~--~G~Av~ 534 (769)
T 1rm6_A 457 EPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFM--VGNASI 534 (769)
T ss_dssp CCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHH--HHHHHH
T ss_pred CCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHH--HHHHHH
Confidence 3567788888889999999998655 5567899999999999999986 45567777775422 111122
Q ss_pred HHH------------HhcCCC--------------------EE------------------EEeChHHHHhhcCC-----
Q 000981 855 LAA------------YKLCRP--------------------VR------------------IYVKRKTDMIMVGG----- 879 (1202)
Q Consensus 855 laA------------~~~gRP--------------------Vk------------------l~~tR~edm~~~~~----- 879 (1202)
.|| ..++.+ +. -.+.-+..+...+.
T Consensus 535 ~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 614 (769)
T 1rm6_A 535 SAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSA 614 (769)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGGGSCCTTCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhhhcccccccccceeccccccccccccccc
Confidence 222 222211 00 00100001100010
Q ss_pred ---CC--ce-EEEEEEEeCCC-CcEEEEEEEEEeeCCCCCCCC----cc-------hhhhc------------cccCCCC
Q 000981 880 ---RH--PM-KITYSVGFKSN-GKITALQLNILIDAGLSPDVS----PI-------MPSNM------------IGALKKY 929 (1202)
Q Consensus 880 ---R~--~~-~~~~k~g~~~d-G~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~~------------~~~~~~Y 929 (1202)
.. ++ -+-.++-+|.+ |++.=.++....|+|-..+-. ++ +..++ .....-|
T Consensus 615 ~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~G~~~~~~~~dY 694 (769)
T 1rm6_A 615 IGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDY 694 (769)
T ss_dssp TTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEETTEESCCSTTTS
T ss_pred cCCCCCcceEEEEEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHhHHHHHHHHHhcceeEecCCEeCCCChhhc
Confidence 11 22 33577888875 999999999999999776521 10 00000 1122456
Q ss_pred ccCcE----EEEEEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHcCC
Q 000981 930 DWGAL----HFDIKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTLSM 976 (1202)
Q Consensus 930 ~ipn~----~~~~~~v~TN~~~~ga~--RG~G~~q~~fa~E~~mDelA~~lg~ 976 (1202)
.+|.. .++...+.++.+ .++| +|.|.+...-+.=.+.+.|.+.+|.
T Consensus 695 ~ip~~~D~P~i~v~~ve~~~~-~~p~GaKGvGE~~~~~~~~AIaNAv~~A~G~ 746 (769)
T 1rm6_A 695 RVPTIVESPDIEVIIVESMDP-NGPFGAKEASEGMLAGFLPAIHEAVYEAVGV 746 (769)
T ss_dssp CCCCTTTCCEEEEEEECCCCT-TSGGGCCCCSSTTTTTHHHHHHHHHHHHHSC
T ss_pred cCCCcccCCCEEEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 55543 577778888755 4676 8999888877777788888888875
No 69
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=91.75 E-value=0.038 Score=53.68 Aligned_cols=82 Identities=16% Similarity=0.322 Sum_probs=15.0
Q ss_pred ccEEEEE-ECCEEEEEccCCCCCcHHHHHhhccCCcccc--cCCC-CCCCCccEEEEec-c-C---CCc----------C
Q 000981 11 RHSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK--LGCG-EGGCGACVVLLSK-Y-N---PEL----------D 71 (1202)
Q Consensus 11 ~~~i~~~-vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k--~gC~-~G~CGaCtV~~~~-~-~---~~~----------~ 71 (1202)
..+|+|. -+|+.++++ +.++++|++.+++. |+. .. ..|+ .|.||.|-|.|.. + + +.+ .
T Consensus 5 ~v~Vtf~~~~G~~~~v~-~~~G~tLl~aa~~~-gi~-i~g~~~CgG~g~CgtC~v~v~~~~~~~l~~~~~~E~~~L~~~~ 81 (123)
T 3n9z_C 5 KITVHFINRDGETLTTK-GKVGDSLLDVVVEN-NLD-IDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAY 81 (123)
T ss_dssp -----------------------------------------CTTCSSSSCSTTBC--------------CHHHHHHCC--
T ss_pred cEEEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCcCCCCCCCCEeCCCeeEEeccccccCCCCChHHHhhhcccc
Confidence 3457775 589888887 78999999999864 665 55 7898 8999999998853 1 1 100 1
Q ss_pred CCCceeeceecccccc-ccCceEEE
Q 000981 72 QLEDFTISSCLTLLCS-VNGCLITT 95 (1202)
Q Consensus 72 ~~~~~~v~sCl~~~~~-~~g~~i~T 95 (1202)
.+......||.+.+.. ++|..|..
T Consensus 82 ~~~~~~RLaCQ~~v~~~ld~l~V~i 106 (123)
T 3n9z_C 82 GLTDRSRLGCQICLTKSMDNMTVRV 106 (123)
T ss_dssp ------CBCC---------------
T ss_pred cccCCeEEeeEeEEccCCCCEEEEE
Confidence 1223356777776553 45655553
No 70
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=91.27 E-value=0.19 Score=60.99 Aligned_cols=155 Identities=11% Similarity=0.038 Sum_probs=91.6
Q ss_pred eEEecCCHHHHHHHHhhccC-CC-CCceeEEccCccceEeeecccCCeeeeCCCccccc---ceeec--CCcEEEcccCc
Q 000981 242 SWHSPISVQELRNVLESVEG-SN-QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELS---VIRRD--QTGIEIGATVT 314 (1202)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~-~~-~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~---~I~~~--~~~l~IGA~vT 314 (1202)
..++|+|.+|+.++++-... .. +-...+.+|||++.-... .....+||++++.... .++.+ +..+++||+++
T Consensus 71 ~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~-~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~ 149 (534)
T 1w1o_A 71 AVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAF-APGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQV 149 (534)
T ss_dssp EEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTC-CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCB
T ss_pred EEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcC-CCCeEEEECccccccccCccEEEcCCCCEEEECCCcC
Confidence 57899999999988763210 01 235677899998753111 1246899998755431 13444 45899999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCC------CCCCchHHHHHhcCcEEEEE
Q 000981 315 ISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIM 388 (1202)
Q Consensus 315 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~------~~~SD~~~~L~al~A~v~i~ 388 (1202)
+.++.+.+.++. | ...+..-...+||||++.+.... +..+|.+ + .++++
T Consensus 150 ~~~l~~~~~~~G-------------l-----~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v-----~--~~evV 204 (534)
T 1w1o_A 150 WIDVLRASLARG-------------V-----APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV-----L--EMDVI 204 (534)
T ss_dssp HHHHHHHHHTTT-------------E-----EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE-----E--EEEEE
T ss_pred HHHHHHHHHHCC-------------C-----cccCCCCCCCEEeceeccCCCccccccccccHhhhE-----E--EEEEE
Confidence 999988765431 0 02223333578999999985442 1122221 1 35555
Q ss_pred eCCce-EEEeh---hhhh-c-CCCCCCCceEEEEEcCCCC
Q 000981 389 TGQKC-EKLML---EEFL-E-RPPLDSRSILLSVEIPCWD 422 (1202)
Q Consensus 389 s~~g~-R~vpl---~dF~-~-~~~l~~~eii~~I~iP~~~ 422 (1202)
..+|+ .+..- .|.| . ......--||+++.+...+
T Consensus 205 ~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p 244 (534)
T 1w1o_A 205 TGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEP 244 (534)
T ss_dssp ETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEE
T ss_pred eCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEE
Confidence 56663 34443 3433 2 3223345689998876543
No 71
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=91.09 E-value=0.17 Score=61.94 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=69.6
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceE--eeec--ccCCeeeeC-CCcccccceee--cCCcEEEcccC
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV--EHYDKYIDI-RYIPELSVIRR--DQTGIEIGATV 313 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~--~~~~~lIdl-~~I~EL~~I~~--~~~~l~IGA~v 313 (1202)
..++.|+|.+|+.++++.... .+-..++++||+++.- .... .....+||+ +++..+ .|.. +...++++|++
T Consensus 37 ~~vv~P~s~~ev~~~v~~a~~-~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~v~aGv 114 (561)
T 2i0k_A 37 TWVCSPKTPQDVVRLANWAHE-HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVTAGAGA 114 (561)
T ss_dssp EEEECCSSHHHHHHHHHHHHH-HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEEEETTS
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEEEcCCC
Confidence 467899999999988763211 1356788899998742 1111 123478999 776554 3443 34689999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCcccccc
Q 000981 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (1202)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~ 366 (1202)
++.+|.+.+.++.-. ++ . .+.+ ..+||||.|++..
T Consensus 115 ~l~~L~~~l~~~Gl~--------l~-------~--~~~~-~~~TvGG~i~~~~ 149 (561)
T 2i0k_A 115 SIEAIVTELQKHDLG--------WA-------N--LPAP-GVLSIGGALAVNA 149 (561)
T ss_dssp BHHHHHHHHHHTTEE--------CS-------S--CCSC-TTCBHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCc--------cc-------c--cCCC-CCcccCCCcccCC
Confidence 999999987765110 11 1 1222 5689999997653
No 72
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=91.05 E-value=0.16 Score=61.49 Aligned_cols=105 Identities=13% Similarity=0.184 Sum_probs=68.5
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeec---ccCCeeeeCCCcccccceeecCCcEEEcccCcHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1202)
.-+++|+|.+|+.++++-... .+-...+++|||.+++ ... .....+||++++.....|..++..++++|++++.+
T Consensus 58 ~~vv~P~s~~ev~~~v~~a~~-~~~pv~~~g~G~~~~~-g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~ 135 (520)
T 1wvf_A 58 SAAVTATTVEQVQGVVKICNE-HKIPIWTISTGRNFGY-GSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQ 135 (520)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTT-TTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCcEEEEcCCCCCCC-CCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHH
Confidence 357899999999887762210 1335667789998853 110 13468999987544333334466899999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-c-cccccccccCCccccc
Q 000981 318 AIEALKEETKEFHSEALMVFKKIAGHMEKIA-S-RFIRNSASVGGNLVMA 365 (1202)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iA-s-~qIRN~aTiGGNl~~a 365 (1202)
|.+.+.++.. .+. + +.-.+.+|||||+++.
T Consensus 136 l~~~l~~~Gl------------------~~~~~~~p~~~~~~igG~~~~~ 167 (520)
T 1wvf_A 136 MYDYIQENNL------------------PVMLSFSAPSAIAGPVGNTMDR 167 (520)
T ss_dssp HHHHHHHTTC------------------SEECCCCSSCTTCCHHHHHHTT
T ss_pred HHHHHHHcCC------------------cccCCCCCCCCeeeeeecccCC
Confidence 9998776511 011 1 2333489999997553
No 73
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=90.99 E-value=0.15 Score=57.73 Aligned_cols=48 Identities=23% Similarity=0.499 Sum_probs=36.0
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 14 i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
.++++.+...+++ +.++++||+.|++. |+. ...+|+.|.||.|.|-+.
T Consensus 238 ~~v~~~~~~~~~~-~~~~~~ll~a~~~~-g~~-~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 238 FTVRLSRSGTSFE-IPANRSILEVLRDA-NVR-VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp EEEEETTTCCEEE-ECTTSCHHHHHHHT-TCC-CCCSCSSSSSCTTEEEEE
T ss_pred EEEEEeCCCeEEE-ECCCCcHHHHHHHc-CCC-CCCCCCCCCCCCCEEEEe
Confidence 4445544333444 46899999999864 776 899999999999999874
No 74
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=90.66 E-value=6 Score=50.30 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=114.8
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCCCccHHHHHHHHH
Q 000981 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACALA 856 (1202)
Q Consensus 788 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aAla 856 (1202)
..++.+..+.||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+...- .++-.|
T Consensus 506 ~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G--~Av~~A 583 (809)
T 1n62_B 506 FDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAG--AATAVA 583 (809)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHH--HHHHHH
T ss_pred cccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHHHH--HHHHHH
Confidence 35678888889999999998655 4567889999999999999985 4557888988764332 222333
Q ss_pred HHhcC------------CC----------EEE------EeChHHHHhhc-------------------C--CCCce-EEE
Q 000981 857 AYKLC------------RP----------VRI------YVKRKTDMIMV-------------------G--GRHPM-KIT 886 (1202)
Q Consensus 857 A~~~g------------RP----------Vkl------~~tR~edm~~~-------------------~--~R~~~-~~~ 886 (1202)
|.+++ .+ |+. .++-.|-.... . ...++ .+-
T Consensus 584 a~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ga~~ 663 (809)
T 1n62_B 584 ARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYF 663 (809)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEECCSSCBCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccccccceeeeeccCCCCccceeEEE
Confidence 33332 11 000 01111111000 0 00122 234
Q ss_pred EEEEeCC-CCcEEEEEEEEEeeCCCCCCCC----cc-------hhhh------------c-cccCCCCccCcE----EEE
Q 000981 887 YSVGFKS-NGKITALQLNILIDAGLSPDVS----PI-------MPSN------------M-IGALKKYDWGAL----HFD 937 (1202)
Q Consensus 887 ~k~g~~~-dG~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~------------~-~~~~~~Y~ipn~----~~~ 937 (1202)
.++-+|. .|++.=.++....|+|-..+-. ++ +..+ + .....-|.+|.. .++
T Consensus 664 aeVeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i~ 743 (809)
T 1n62_B 664 CIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWE 743 (809)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCCCE
T ss_pred EEEEEECCcCeEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEECCCCCCCCCChhhccCCChhhCCCeE
Confidence 6777876 7999999999999999775421 10 0000 0 112234655532 455
Q ss_pred EEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHc---CC
Q 000981 938 IKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTL---SM 976 (1202)
Q Consensus 938 ~~~v~TN~~~~ga~--RG~G~~q~~fa~E~~mDelA~~l---g~ 976 (1202)
...+.+.. +.++| +|.|.+...-+.=.+.+.|.+.+ |.
T Consensus 744 v~~ve~~~-~~~p~GaKGvGE~~~~~~apAiaNAI~~A~~~~G~ 786 (809)
T 1n62_B 744 TDYTVTPS-PHHPIGAKGVGESPHVGGVPCFSNAVNDAYAFLNA 786 (809)
T ss_dssp EEECCCCC-TTSTTSBCCCTTHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCC-CCCCCCCcccCCcccchHHHHHHHHHHHHHHhcCC
Confidence 66666653 35777 89999998888878888888888 65
No 75
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=90.40 E-value=0.23 Score=60.17 Aligned_cols=104 Identities=11% Similarity=0.106 Sum_probs=69.0
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecc--cCCeeeeCCCcccccceee-----cC--CcEEEcc
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVE--HYDKYIDIRYIPELSVIRR-----DQ--TGIEIGA 311 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~--~~~~lIdl~~I~EL~~I~~-----~~--~~l~IGA 311 (1202)
...++|+|.+|+.++++-.....+-...+.+|||++. ... ....+||++++..+ .|.. ++ ..++++|
T Consensus 63 ~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~---g~~~~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~a 138 (524)
T 2exr_A 63 LAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSIN---GQAMAEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSG 138 (524)
T ss_dssp SEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSS---STTCCTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEET
T ss_pred CEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCC---CcccCCCEEEEECcCCCCc-EEeecccCCCCCceEEEEeC
Confidence 3578999999999887632100134577889999975 211 23589999876555 4555 33 5799999
Q ss_pred cCcHHHHHHH-HHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCcccccc
Q 000981 312 TVTISKAIEA-LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (1202)
Q Consensus 312 ~vTl~~l~~~-l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~ 366 (1202)
++++.++.+. ++++. | ...++.--+.+||||+|++..
T Consensus 139 Gv~~~~l~~~~l~~~G-------------l-----~~~~~~s~~~~tiGG~va~ng 176 (524)
T 2exr_A 139 GALWEDVLKRCVSEYG-------------L-----APRSWTDYLGLTVGGTLSNAG 176 (524)
T ss_dssp TCBHHHHHHHHHHHHS-------------E-----ECSCCCSCCSSBHHHHHTTCC
T ss_pred CcCHHHHHHHHHHHcC-------------C-----CCCCCCcCCceeecccCCCCC
Confidence 9999998554 43331 0 023333346799999999874
No 76
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=90.32 E-value=5.1 Score=50.81 Aligned_cols=184 Identities=16% Similarity=0.091 Sum_probs=112.8
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE-----cccCCCCCCCCCCccHHHHHHHHHH
Q 000981 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT-----RRVGGAFGGKAIKAMPVATACALAA 857 (1202)
Q Consensus 788 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~-----~~vGGgFGgK~~~~~~~~~~aAlaA 857 (1202)
..++.+..+.||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+.. ...++-.||
T Consensus 484 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~~p~~~~t~aSr~t~~--~G~Av~~Aa 561 (788)
T 1t3q_B 484 HDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAVI--GAGSIGRAA 561 (788)
T ss_dssp CBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHHHH--HHHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCccchHHHH--HHHHHHHHH
Confidence 46678888889999999998655 4567899999999999999996 45577777775422 222222233
Q ss_pred Hhc------------CCC---EEE-------------EeChHHH----------Hhh--cCC---------CC---ce-E
Q 000981 858 YKL------------CRP---VRI-------------YVKRKTD----------MIM--VGG---------RH---PM-K 884 (1202)
Q Consensus 858 ~~~------------gRP---Vkl-------------~~tR~ed----------m~~--~~~---------R~---~~-~ 884 (1202)
.++ +.+ +.+ .++-.|- +.. ... .+ ++ -
T Consensus 562 ~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ga 641 (788)
T 1t3q_B 562 SIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGG 641 (788)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECCCSSCEEEEEE
T ss_pred HHHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhcCcccccCccCCcccccccCCCCCCcceEE
Confidence 332 211 000 0111111 100 000 00 22 2
Q ss_pred EEEEEEeCCC-CcEEEEEEEEEeeCCCCCCCC----cc-------hhhh-------------ccccCCCCccCcE----E
Q 000981 885 ITYSVGFKSN-GKITALQLNILIDAGLSPDVS----PI-------MPSN-------------MIGALKKYDWGAL----H 935 (1202)
Q Consensus 885 ~~~k~g~~~d-G~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~-------------~~~~~~~Y~ipn~----~ 935 (1202)
+-.++-+|.+ |++.=.++....|+|-..+-. ++ +..+ ......-|.+|.. .
T Consensus 642 ~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~ 721 (788)
T 1t3q_B 642 HAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPD 721 (788)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCCCTTTCCC
T ss_pred EEEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHHhHHHHHHHHhcceeEECCCCCCCCCChhhccCCCcccCCC
Confidence 3467778875 999999999999999775421 00 0000 0112234655532 4
Q ss_pred EEEEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHc
Q 000981 936 FDIKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTL 974 (1202)
Q Consensus 936 ~~~~~v~TN~~~~ga~--RG~G~~q~~fa~E~~mDelA~~l 974 (1202)
++...+.++.+ .++| +|.|.+...-+.=.+.+.|.+.+
T Consensus 722 i~v~~ve~~~~-~~p~GaKGvGE~~~~~~a~AiaNAI~~A~ 761 (788)
T 1t3q_B 722 IRIRHLETPSP-LVPGGIKGMGESAMISAPAAVVAAVNDAL 761 (788)
T ss_dssp EEEEECCCCCT-TSGGGBCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHH
Confidence 56667777655 4676 79999999888888888888888
No 77
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=88.59 E-value=0.65 Score=55.46 Aligned_cols=84 Identities=4% Similarity=0.085 Sum_probs=59.0
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEee-ecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYK-EVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k-~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (1202)
...++|+|.+|+.++++-... .+-...+.+||+++.-+- .......+||++++.....|..++..+++||++++.+|.
T Consensus 38 ~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~ 116 (473)
T 3rja_A 38 TAIAQTQTTAHIQSAVQCAKK-LNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLA 116 (473)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHH
Confidence 467899999999887763211 245688899999875211 112345899998855444344456689999999999999
Q ss_pred HHHHHH
Q 000981 320 EALKEE 325 (1202)
Q Consensus 320 ~~l~~~ 325 (1202)
+.+.++
T Consensus 117 ~~l~~~ 122 (473)
T 3rja_A 117 TVLNDK 122 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887654
No 78
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=87.97 E-value=1.5 Score=56.44 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=117.9
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHh---CCCCccEEEEE------cccCCCCCCCCCCccHHHH
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCL---GIPEHNVRVIT------RRVGGAFGGKAIKAMPVAT 851 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~L---glp~~kV~V~~------~~vGGgFGgK~~~~~~~~~ 851 (1202)
+...++.+..+.||.++|+++++.. ..+.+.+|+.| |||.++|+|.. +.-+|.+|++.+.. ...
T Consensus 629 ~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~--~G~ 706 (907)
T 1vlb_A 629 PDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVM--TGN 706 (907)
T ss_dssp TCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHHH--HHH
T ss_pred CCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHH--HHH
Confidence 3456788888889999999998655 45678899999 99999999985 45678888886422 222
Q ss_pred HHHHHHHhcCC---C-----------------E--EEEeChHH--HHhh-cCC-C--C--ce-EEEEEEEeCCC-CcEEE
Q 000981 852 ACALAAYKLCR---P-----------------V--RIYVKRKT--DMIM-VGG-R--H--PM-KITYSVGFKSN-GKITA 899 (1202)
Q Consensus 852 ~aAlaA~~~gR---P-----------------V--kl~~tR~e--dm~~-~~~-R--~--~~-~~~~k~g~~~d-G~i~a 899 (1202)
++-.||.++++ + . ...|.-.. .+.. ++. . . ++ -.-.++-+|.+ |++.=
T Consensus 707 Av~~Aa~~l~~~l~~~aa~~l~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ga~~aEVeVD~~TG~v~V 786 (907)
T 1vlb_A 707 AIRVACENLLKACEKPGGGYYTYDELKAADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTV 786 (907)
T ss_dssp HHHHHHHHHHHHHBCTTSSBCCHHHHHHTTCCCEEEEEEECTTCBCCCTTTCCSBCCSCEEEEEEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHhhccCCHHHHHhhcccccccceecCCCccccccccCCCCCCCCcceEEEEEEEEEECCCCcEEE
Confidence 33334444321 1 0 00010000 0000 011 1 1 22 23467788864 99999
Q ss_pred EEEEEEeeCCCCCCCC----cc-------hhhh---------ccccCCCCccCcE----E-EEEEEeecCCCCCCcc--C
Q 000981 900 LQLNILIDAGLSPDVS----PI-------MPSN---------MIGALKKYDWGAL----H-FDIKVCRTNLPSRSAM--R 952 (1202)
Q Consensus 900 ~~~~~~~d~Ga~~~~s----~~-------~~~~---------~~~~~~~Y~ipn~----~-~~~~~v~TN~~~~ga~--R 952 (1202)
.++....|.|-..+-. ++ +..+ ......-|.+|.. . ++...+.++.+ .++| +
T Consensus 787 ~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~G~~~~~~~~dY~ip~~~D~P~~i~v~~ve~~~~-~~p~GaK 865 (907)
T 1vlb_A 787 DGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATLVGAGFPFIKQIPDKLDIVYVNHPRP-DGPFGAS 865 (907)
T ss_dssp EEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTTTSSSTTTTTCCCGGGSCSCEEEEECCCCCT-TSGGGCC
T ss_pred EEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCCChhhCcCCChHhCCCcEEEEEecCCCC-CCCCcCc
Confidence 9999999999776521 10 0000 1112345766653 2 67777887655 4676 7
Q ss_pred CCChhHHHHHHHHHHHHHHHHcCC
Q 000981 953 APGEVQGSFIAEAVIEHVASTLSM 976 (1202)
Q Consensus 953 G~G~~q~~fa~E~~mDelA~~lg~ 976 (1202)
|.|.+...-+.=.+.+.+.+.+|.
T Consensus 866 GvGE~~~~~~~~AIaNAv~~A~G~ 889 (907)
T 1vlb_A 866 GVGELPLTSPHAAIINAIKSATGV 889 (907)
T ss_dssp CCTTGGGSSHHHHHHHHHHHHHSC
T ss_pred cccccccchHHHHHHHHHHHhhCC
Confidence 999988877777888888888875
No 79
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.38 E-value=0.55 Score=56.26 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=48.3
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCcc----cccCCCCCC--CCccEEEEeccCCCcCCCCcee-eceeccc
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS----VKLGCGEGG--CGACVVLLSKYNPELDQLEDFT-ISSCLTL 84 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g----~k~gC~~G~--CGaCtV~~~~~~~~~~~~~~~~-v~sCl~~ 84 (1202)
.+++|++||+.+++. +.+||++.|... |..- .|. =..|. ||+|.|-| ++.+ +++|.++
T Consensus 14 ~~v~~~~dg~~~~~~---~g~ti~~a~~~~-g~~~~~~~~~~-~p~g~~~~~~c~v~v----------~g~~~~~ac~~~ 78 (493)
T 1y56_A 14 KKVTIYFEGKELEAY---EGEKLPVALLAN-EIYWLTTSNEG-RKRGAFTFGPVPMTV----------NGVKGLEARRIK 78 (493)
T ss_dssp CEEEEEETTEEEEEE---TTCBHHHHHHHT-TCCCCEECTTS-CEECSSSSSCCEEBS----------SSCTTEEGGGCB
T ss_pred CeEEEEECCEEEEec---CCCHHHHHHHHC-CCceecCCCCC-CCCccccceEEEEEE----------CCEecccceeEE
Confidence 369999999998885 699999988753 4311 122 12344 78999988 3443 8999999
Q ss_pred cccccCceEEEee
Q 000981 85 LCSVNGCLITTSE 97 (1202)
Q Consensus 85 ~~~~~g~~i~TvE 97 (1202)
+. +|..+.|-.
T Consensus 79 v~--~Gm~v~t~~ 89 (493)
T 1y56_A 79 VK--DGMKIERQG 89 (493)
T ss_dssp CC--TTCEEBCCC
T ss_pred cc--cCcEEeccc
Confidence 63 688777643
No 80
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=87.27 E-value=3.5 Score=55.35 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=47.2
Q ss_pred CcCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCC
Q 000981 785 YMETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAI 844 (1202)
Q Consensus 785 ~mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~ 844 (1202)
.....++.+....||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+
T Consensus 1018 ~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t 1088 (1335)
T 3zyv_A 1018 FYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGA 1088 (1335)
T ss_dssp GGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHH
T ss_pred cccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHH
Confidence 34566788888889999999998754 4567888999999999999964 456777777753
No 81
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=85.78 E-value=1.2 Score=53.31 Aligned_cols=155 Identities=13% Similarity=0.086 Sum_probs=90.6
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (1202)
.-.++|+|.+|+.++++-... .+-...+.+||+++.-.-.. .....+||++++..+ .|..++..+++||++++.+|.
T Consensus 47 ~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l~ 124 (495)
T 3fw9_A 47 SAIILPGSKEELSNTIRCIRK-GSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLGELY 124 (495)
T ss_dssp SEEECCCSHHHHHHHHHHHHT-SSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHHH
Confidence 467899999999887763321 23467888999987321100 113589999885444 333446689999999999998
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccCC------CCCCchHHHHHhcCcEEEEEeCCce
Q 000981 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQKC 393 (1202)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p~------~~~SD~~~~L~al~A~v~i~s~~g~ 393 (1202)
+.+.++...+ .+. ..+-...+|||++....-. ++..|.+ -.++++..+|+
T Consensus 125 ~~l~~~g~gl----------------~~~-~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v-------~~~~vV~adG~ 180 (495)
T 3fw9_A 125 YAITESSSKL----------------GFT-AGWCPTVGTGGHISGGGFGMMSRKYGLAADNV-------VDAILIDANGA 180 (495)
T ss_dssp HHHHHHCSSE----------------ECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGE-------EEEEEECTTCC
T ss_pred HHHHHhcCCc----------------eec-cCCCCCCeEeeeccCCCCcccccCCCchhheE-------EEEEEEcCCCC
Confidence 8766541000 011 1233456788887666542 1112322 24556666664
Q ss_pred EEE---ehhhhhc--CC-CCCCCceEEEEEcCCC
Q 000981 394 EKL---MLEEFLE--RP-PLDSRSILLSVEIPCW 421 (1202)
Q Consensus 394 R~v---pl~dF~~--~~-~l~~~eii~~I~iP~~ 421 (1202)
..- .=.|+|- +. ....-.||+++.+...
T Consensus 181 i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~ 214 (495)
T 3fw9_A 181 ILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLL 214 (495)
T ss_dssp EECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECE
T ss_pred EEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEE
Confidence 332 1125442 32 3344569999887654
No 82
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=85.64 E-value=0.79 Score=54.44 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=57.5
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (1202)
..++.|+|.+|+.++++.... .+-...+.+||+++.-... .....+||++++..+ .+..++..+++||++++.+|.+
T Consensus 40 ~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l~~ 116 (459)
T 2bvf_A 40 SLIARCLSAGDVAKSVRYACD-NGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVISGDLVK 116 (459)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCHHHHHH
Confidence 457899999999887752211 2456788999998753211 235689999875443 2333356899999999999999
Q ss_pred HHHHH
Q 000981 321 ALKEE 325 (1202)
Q Consensus 321 ~l~~~ 325 (1202)
.+.++
T Consensus 117 ~l~~~ 121 (459)
T 2bvf_A 117 EAAKF 121 (459)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 87654
No 83
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=85.31 E-value=1.1 Score=54.19 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=56.4
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeec--CCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~l 318 (1202)
...++|+|.+|+.++++-... .+-...+.+||+++...........+||++++ +.|+++ +..++|||++++.+|
T Consensus 60 ~~vv~p~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~l 135 (530)
T 2y3s_A 60 EEIHLVGSAAEIEQVLSRAVR-SGKRVAVRSGGHCYEDFVANSDVRVVMDMSRL---SAVGFDEERGAFAVEAGATLGAV 135 (530)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTCTTCCEEEECTTC---CCEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCcccCCCeEEEEcccC---CCEEEcCCCCEEEEeCCCCHHHH
Confidence 457899999998887652211 24568889999987542211234689999875 555544 468999999999999
Q ss_pred HHHHHH
Q 000981 319 IEALKE 324 (1202)
Q Consensus 319 ~~~l~~ 324 (1202)
.+.+.+
T Consensus 136 ~~~l~~ 141 (530)
T 2y3s_A 136 YKTLFR 141 (530)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988753
No 84
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=85.20 E-value=0.8 Score=56.10 Aligned_cols=47 Identities=30% Similarity=0.649 Sum_probs=39.4
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEe
Q 000981 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLS 64 (1202)
Q Consensus 13 ~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~-~G~CGaCtV~~~ 64 (1202)
+|+|.-+|+.+++ ++++|||+.+++. |+. ...+|+ .|.||.|.|-|.
T Consensus 5 ~V~~~~sg~~v~v---~~G~tLLeAa~~a-Gi~-ip~~C~G~G~CGtC~v~V~ 52 (631)
T 3zyy_X 5 KVLFKPDQKEVAI---SENTNLMEALNLA-GIN-IKTVCGGAGTCGKCLVRVV 52 (631)
T ss_dssp EEEEETTTEEEEE---CTTSCHHHHHHHH-TCC-CCCSCCCSSCCSTTEEEEE
T ss_pred EEEEecCCeEEEE---CCCCcHHHHHHHc-CCC-CCcCCCCCCcCCCCEEEEe
Confidence 5788878877665 5799999999875 874 899999 999999999883
No 85
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=84.68 E-value=1.3 Score=53.56 Aligned_cols=79 Identities=9% Similarity=0.094 Sum_probs=56.1
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeec--CCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~l 318 (1202)
.-.++|+|.+|+.++++-... .+-...+.+||+++...-.......+||++++ +.|+++ +..++|||++++.+|
T Consensus 57 ~~vv~p~s~~dv~~~v~~a~~-~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~l 132 (521)
T 2ipi_A 57 DVVYVVHTADQVVDAVNQAMA-AGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQM---RQVFYDSGKRAFAVEPGATLGET 132 (521)
T ss_dssp SEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCGGGCTTCCEEEECTTC---CCEEEETTTTEEEECTTSBHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCeEEEecccC---CCeEEeCCCCEEEEeCCcCHHHH
Confidence 457899999998887652211 24567888999987542211234689999875 555544 568999999999999
Q ss_pred HHHHH
Q 000981 319 IEALK 323 (1202)
Q Consensus 319 ~~~l~ 323 (1202)
.+.+.
T Consensus 133 ~~~l~ 137 (521)
T 2ipi_A 133 YRALY 137 (521)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 86
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=84.55 E-value=1.3 Score=53.58 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=56.2
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeec--CCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~l 318 (1202)
.-.++|+|.+|+.++++-... .+-...+.+||+++...-.......+||++++ +.|+++ +..++|||++++.+|
T Consensus 59 ~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m---~~i~~d~~~~~v~v~aG~~~~~l 134 (523)
T 2wdx_A 59 DYIHLVGSTQQVADAVEETVR-TGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLL---TEIAYDPSMNAFLIEPGNTLSEV 134 (523)
T ss_dssp SEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCSSSSSSSTTCCEEEECTTC---CCEEEETTTTEEEECTTCBHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCCccCCCCeEEEEcccC---CCEEEcCCCCEEEEcCCCCHHHH
Confidence 457899999998887652211 23567888999987542211224689999875 455544 568999999999999
Q ss_pred HHHHH
Q 000981 319 IEALK 323 (1202)
Q Consensus 319 ~~~l~ 323 (1202)
.+.+.
T Consensus 135 ~~~l~ 139 (523)
T 2wdx_A 135 YEKLY 139 (523)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 87
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=83.92 E-value=1.2 Score=53.61 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=56.4
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeec-ccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (1202)
..+++|+|.+|+.++++-... .+-...+.+||+++...... .....+||++++..+ .+. ++..+++||++++.+|.
T Consensus 44 ~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~ 120 (503)
T 1zr6_A 44 AAIAIPRSTEDIAAAVQCGLD-AGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTA 120 (503)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHH
Confidence 357899999998887652211 24568889999988542211 223689999875444 333 35689999999999999
Q ss_pred HHHHH
Q 000981 320 EALKE 324 (1202)
Q Consensus 320 ~~l~~ 324 (1202)
+.+.+
T Consensus 121 ~~l~~ 125 (503)
T 1zr6_A 121 LELLD 125 (503)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88744
No 88
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=83.71 E-value=1.2 Score=53.84 Aligned_cols=83 Identities=10% Similarity=0.045 Sum_probs=57.0
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeee-cccCCeeeeCCCcccccceeecCCcEEEcccCcHHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (1202)
.-.++|+|.+|+.++++-... .+-...+.+||+++...-. ......+||++++..+ .|..++..+++||++++.+|.
T Consensus 55 ~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l~ 132 (518)
T 3vte_A 55 LVIVTPSNNSHIQATILCSKK-VGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEVY 132 (518)
T ss_dssp SEEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHHH
Confidence 467899999999887752211 2346788899998743211 0124688999875443 233345689999999999998
Q ss_pred HHHHHH
Q 000981 320 EALKEE 325 (1202)
Q Consensus 320 ~~l~~~ 325 (1202)
+.+.++
T Consensus 133 ~~l~~~ 138 (518)
T 3vte_A 133 YWINEK 138 (518)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876653
No 89
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=83.27 E-value=1.5 Score=52.73 Aligned_cols=79 Identities=14% Similarity=0.208 Sum_probs=56.0
Q ss_pred ceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccCCeeeeCCCcccccceeec--CCcEEEcccCcHHHH
Q 000981 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISKA 318 (1202)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~l 318 (1202)
...++|+|.+|+.++++-... .+-...+.+||+++...-.......+||++++. .|+++ +..++|||++++.+|
T Consensus 36 ~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~gvvIdl~~l~---~i~vd~~~~~v~v~aG~~~~~l 111 (501)
T 3pop_A 36 EEFFLPATPDDVVASLQKAVT-EGRGVACRSGGHCGQDFVGTPRRDLVLDLHNLH---AIGPAADGAGVRVGSGATVDQV 111 (501)
T ss_dssp SEEEECSSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTSSCCSEEEECTTCC---CEEECTTSSSEEEETTCBHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCeEEEEeCCccCCCccccCCCEEEEEecccC---CeEEcCCCCEEEEECCcCHHHH
Confidence 457899999999887652211 245678889999875421112236899998854 45544 568999999999999
Q ss_pred HHHHH
Q 000981 319 IEALK 323 (1202)
Q Consensus 319 ~~~l~ 323 (1202)
.+.+.
T Consensus 112 ~~~l~ 116 (501)
T 3pop_A 112 QKALF 116 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 90
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=79.56 E-value=3.9 Score=46.35 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=46.7
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCC
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAI 844 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~ 844 (1202)
..+.++.+..+.||.++|+++.+-. ..+.+.+|+.||+|.++|+|... ..+|.+|++.+
T Consensus 21 ~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrst 90 (330)
T 3hrd_B 21 PNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQT 90 (330)
T ss_dssp CCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHH
T ss_pred CCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHhH
Confidence 4567788888889999999987543 35677889999999999999864 45677888764
No 91
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=78.29 E-value=2.4 Score=46.55 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=67.6
Q ss_pred eecC-CceEEecCCHHHHHHHHhhccCCCCCceeEEccCccceEeeecccC-CeeeeCCCcccccceeecCCcEEEcccC
Q 000981 236 LLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHY-DKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1202)
Q Consensus 236 ~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~-~~lIdl~~I~EL~~I~~~~~~l~IGA~v 313 (1202)
.+.+ .. ++.|+|.+|+.+++. -...++.|||.+.+-.. ... ..+|++++ |+.|+++ + ++||++
T Consensus 18 ~igg~a~-vv~p~s~edv~~~v~-------ipv~v~GgGsnll~~d~-~~~~GvVI~l~~---~~~I~vd-~--~v~aG~ 82 (268)
T 2gqt_A 18 GVGGPAE-LWTVETREELKRATE-------APYRVLGNGSNLLVLDE-GVPERVIRLAGE---FQTYDLK-G--WVGAGT 82 (268)
T ss_dssp CCCCEEE-EEEECSHHHHHHHTT-------SCEEECSSSSSEEECTT-CCSSEEEEECGG---GGCBCTT-S--EEETTS
T ss_pred ccCcceE-EEEeCCHHHHHHHhC-------CCeEEcCCCcCceecCC-CcCCeEEEEcCC---CCCcEEc-C--EEECCC
Confidence 3444 34 999999999999882 46888999998865322 223 58899864 5666554 3 999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000981 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1202)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a~p 367 (1202)
++.+|.+.+.++. +. -+...+..+ +|+||++++...
T Consensus 83 ~~~~l~~~~~~~G----------l~----Gle~~~giP----GtvGGav~~NaG 118 (268)
T 2gqt_A 83 LLPLLVQEAARAG----------LS----GLEGLLGIP----AQVGGAVKMNAG 118 (268)
T ss_dssp BHHHHHHHHHHTT----------EE----SCGGGTTCC----CBHHHHHHTTCE
T ss_pred CHHHHHHHHHHcC----------Cc----CCccccCcc----chhHHHHHhccc
Confidence 9999999866541 10 011233333 699999888644
No 92
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=77.02 E-value=5.3 Score=51.89 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=59.0
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhhccCCc----ccccC------CCCCCCCccEEEEeccCCCcCCCCceeece
Q 000981 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK----SVKLG------CGEGGCGACVVLLSKYNPELDQLEDFTISS 80 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~----g~k~g------C~~G~CGaCtV~~~~~~~~~~~~~~~~v~s 80 (1202)
..+|+|++||+.++.. +..||...|... |.. +.|.+ |..|.|..|.|-+.+.. .+......+.+
T Consensus 20 ~~~~~~~~dG~~~~~~---~g~tv~~aL~~~-Gv~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~--~g~~~~~~~~a 93 (965)
T 2gag_A 20 EEALSLTVDGAKLSAF---RGDTVASALLAN-GVRRAGNSLYLDRPRGIFAAGVEEPNALVTVSARH--EQDIDESMLPA 93 (965)
T ss_dssp EEEEEEEETTEEEEEE---ETCBHHHHHHHT-TCCBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCS--TTCCCEEEEEG
T ss_pred CCeEEEEECCEEEEec---CCCHHHHHHHHc-CCeEeecCCCCCCCcccccCCccCCceEEEEccCC--CCCcCCccccc
Confidence 3479999999998875 588998888754 433 22333 77799999999994110 11112346789
Q ss_pred eccccccccCceEEEeecCCC
Q 000981 81 CLTLLCSVNGCLITTSEGLGN 101 (1202)
Q Consensus 81 Cl~~~~~~~g~~i~TvEgl~~ 101 (1202)
|.+++ -+|..|.|..|++.
T Consensus 94 c~~~~--~~gm~~~~~~glg~ 112 (965)
T 2gag_A 94 TTVPV--TEDLNATLLSGLGV 112 (965)
T ss_dssp GGCBC--CTTEEEEECSSCBC
T ss_pred eeeec--ccceEeecccCCCC
Confidence 99886 47999999988874
No 93
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=74.91 E-value=2.9 Score=52.73 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=52.9
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCCCccHHHHHHH
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAIKAMPVATACA 854 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~~~~~~~~~aA 854 (1202)
+.+.++.+....||.++|+++++.. ..+.+.+|+.||||.++|+|... .-+|.+|++.+. ....++.
T Consensus 444 ~~~~~a~v~l~~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~ 521 (755)
T 3nvz_C 444 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD--IYGQAVY 521 (755)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH--HHHHHHH
T ss_pred CCcceEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHH--HHHHHHH
Confidence 4567788888889999999998543 34567789999999999999754 347888888642 2233344
Q ss_pred HHHHhc
Q 000981 855 LAAYKL 860 (1202)
Q Consensus 855 laA~~~ 860 (1202)
.||.++
T Consensus 522 ~Aa~~l 527 (755)
T 3nvz_C 522 EACQTI 527 (755)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455554
No 94
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=68.08 E-value=6 Score=50.05 Aligned_cols=73 Identities=16% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCeEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCCCccHHHHHHHH
Q 000981 787 ETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACAL 855 (1202)
Q Consensus 787 Ep~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aAl 855 (1202)
...++.+....||.++|+++++.. ..+.+.+|+.||||.++|+|.. +..+|.+|++.+. ....++-.
T Consensus 465 ~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~~ 542 (777)
T 2w3s_B 465 NQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGAD--MNGMAVKD 542 (777)
T ss_dssp CEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHH--HHHHHHHH
T ss_pred CCCceEEEEccCCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHH--HHHHHHHH
Confidence 346678888889999999988654 4567889999999999999974 5567888888642 23333444
Q ss_pred HHHhcC
Q 000981 856 AAYKLC 861 (1202)
Q Consensus 856 aA~~~g 861 (1202)
||.+++
T Consensus 543 Aa~~l~ 548 (777)
T 2w3s_B 543 ACETLR 548 (777)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555553
No 95
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=61.61 E-value=12 Score=43.79 Aligned_cols=58 Identities=22% Similarity=0.127 Sum_probs=43.0
Q ss_pred ccceEEEEeeCCcEEEEECCcCCCCchhHHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccccCCccCccchHHH
Q 000981 1055 STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSE 1131 (1202)
Q Consensus 1055 ~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~aQIaAe~Lgi~~~~~~~~~~e~V~v~~~dT~~~p~~~~t~gS~~t~ 1131 (1202)
+..+.+..+.||+++|.++. |+.+ .+.+.+|+.||+ |.++|+|.. |..+|.+|++...
T Consensus 188 p~~~~A~~~~~g~l~v~~st----Q~p~-~~r~~vA~~Lgl--------p~~~VrV~~------~~vGGgFG~K~~~ 245 (425)
T 3hrd_A 188 PDAGVSYYDNEGMLTVVVST----QNPH-YDRGEVAGMLAL--------PNSKVRIIQ------ATTGGGFGGKLDL 245 (425)
T ss_dssp CCEEEEEECTTCCEEEEECC----SCHH-HHHHHHHHHTTC--------CGGGEEEEE------CBCCCCTTTTSSC
T ss_pred CceEEEEECCCCeEEEEECC----CCHH-HHHHHHHHHhCC--------ChhhEEEEe------CCCCCCCCCCccc
Confidence 56677777668999998865 4444 345668899999 999999974 5567777877543
No 96
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=57.52 E-value=13 Score=44.53 Aligned_cols=82 Identities=9% Similarity=0.170 Sum_probs=53.0
Q ss_pred eEEecCCHHHHHHHHhhccCCCCCceeEEccCccc-eE-eee-cccCCeeeeCCCcccccceeecCCcEEEcccCcHHHH
Q 000981 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGM-GY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (1202)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l-gv-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (1202)
-.++|+|.+|..++++-... .+-...+-+||++. |. ... ......+||++++... .|..+...++||+++++.++
T Consensus 55 ~vv~p~~~~~v~~~v~~a~~-~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~ 132 (500)
T 3tsh_A 55 YIITPTQVSHIQSAVVCGRR-HSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGEL 132 (500)
T ss_dssp EEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHH
Confidence 46889999988876652110 13345666888764 22 111 1223578999986543 23344568999999999999
Q ss_pred HHHHHHH
Q 000981 319 IEALKEE 325 (1202)
Q Consensus 319 ~~~l~~~ 325 (1202)
.+.|.++
T Consensus 133 ~~~l~~~ 139 (500)
T 3tsh_A 133 YYAIYKA 139 (500)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8876654
No 97
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=51.82 E-value=14 Score=49.50 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=52.0
Q ss_pred cCCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCCCccHHHHHHH
Q 000981 786 METQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVITR------RVGGAFGGKAIKAMPVATACA 854 (1202)
Q Consensus 786 mEp~~avA~~~~dg~l~V~~sTQ~p----~-~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~~~~~~~~~aA 854 (1202)
+.+.++.+....||.++|+++++.. + .+.+.+|+.||||.++|+|... ..+|.+|++.+. ....++-
T Consensus 1014 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~--~~G~Av~ 1091 (1332)
T 3unc_A 1014 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD--IYGQAVY 1091 (1332)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH--HHHHHHH
T ss_pred CCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHH--HHHHHHH
Confidence 4667788888889999999997543 3 4567789999999999999754 457888888642 2223334
Q ss_pred HHHHhc
Q 000981 855 LAAYKL 860 (1202)
Q Consensus 855 laA~~~ 860 (1202)
.||.++
T Consensus 1092 ~A~~~l 1097 (1332)
T 3unc_A 1092 EACQTI 1097 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 445544
No 98
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=41.54 E-value=14 Score=32.09 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=25.6
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhhccCCc
Q 000981 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1202)
Q Consensus 12 ~~i~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~ 45 (1202)
|+|++.|||+.....++++.+|+.|+|+ +++|.
T Consensus 1 M~v~Vkl~g~~~~~~ev~~g~Tv~dLL~-~Lgl~ 33 (74)
T 2l32_A 1 MNVTVEVVGEETSEVAVDDDGTYADLVR-AVDLS 33 (74)
T ss_dssp CEEEEECSSSSEEEEECSTTCSHHHHHH-TTCCC
T ss_pred CEEEEEEeCccceeEEcCCCCcHHHHHH-HcCCC
Confidence 6799999998633234778999999998 47876
No 99
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=41.43 E-value=51 Score=28.44 Aligned_cols=61 Identities=20% Similarity=0.149 Sum_probs=39.0
Q ss_pred EEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceeccccccc-cCceE
Q 000981 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCLI 93 (1202)
Q Consensus 15 ~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g~~i 93 (1202)
.++|||+++++ . .+||.++|. ++++.. -.|.|.+ |+.-|..--..-..+ +|-.|
T Consensus 2 ~I~vNG~~~e~-~---~~Tl~~LL~-~l~~~~----------~~vAV~v----------Ng~iVpr~~~~~~~L~dGD~v 56 (73)
T 2kl0_A 2 LVTINGEQREV-Q---SASVAALMT-ELDCTG----------GHFAVAL----------NYDVVPRGKWDETPVTAGDEI 56 (73)
T ss_dssp CEEETTEEECC-C---CSBHHHHHH-HTTCCS----------SSCEEEE----------SSSEECHHHHTTCBCCTTCEE
T ss_pred EEEECCEEEEc-C---CCcHHHHHH-HcCCCC----------CcEEEEE----------CCEECChHHcCcccCCCCCEE
Confidence 47999998876 3 589999998 467762 2346777 455554443222222 57777
Q ss_pred EEeecCC
Q 000981 94 TTSEGLG 100 (1202)
Q Consensus 94 ~TvEgl~ 100 (1202)
.-+--+|
T Consensus 57 eIv~~Vg 63 (73)
T 2kl0_A 57 EILTPRQ 63 (73)
T ss_dssp EEECCCC
T ss_pred EEEcccc
Confidence 7777665
No 100
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=37.41 E-value=34 Score=30.78 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=21.3
Q ss_pred ccEEEEEECCEEEEEccCCCC-CcHHHHHhhccCCc
Q 000981 11 RHSVVFAVNGEKFEVSSVDPS-TTLLEFLRYHTRFK 45 (1202)
Q Consensus 11 ~~~i~~~vNg~~~~~~~~~p~-~~L~~~LR~~~~l~ 45 (1202)
...+.++|||+++++. .. .||.++|.. +++.
T Consensus 18 ~~~M~I~vNGe~~el~---~~~~Tv~dLL~~-L~~~ 49 (87)
T 1tyg_B 18 GGRHMLQLNGKDVKWK---KDTGTIQDLLAS-YQLE 49 (87)
T ss_dssp ----CEEETTEEECCS---SSCCBHHHHHHH-TTCT
T ss_pred CcceEEEECCEEEECC---CCCCcHHHHHHH-hCCC
Confidence 3456789999988874 34 899999974 6654
No 101
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=30.48 E-value=27 Score=30.71 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=38.5
Q ss_pred EEEECCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeccCCCcCCCCceeeceecccccc-ccCceE
Q 000981 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS-VNGCLI 93 (1202)
Q Consensus 15 ~~~vNg~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~g~~i 93 (1202)
.++|||+++++.. ...+||.++|.+ +++.. --.|.|.+ |+.-|..--..-.. -+|-.|
T Consensus 2 ~I~vNGe~~e~~~-~~~~Tl~~LL~~-l~~~~---------~~~vAVav----------Ng~iVpr~~~~~~~L~dGD~I 60 (78)
T 2k5p_A 2 NLTVNGKPSTVDG-AESLNVTELLSA-LKVAQ---------AEYVTVEL----------NGEVLEREAFDATTVKDGDAV 60 (78)
T ss_dssp EEEETTEEEECSS-CSCEEHHHHHHH-HTCSC---------TTTCCEEE----------TTEECCTTHHHHCEECSSBCE
T ss_pred EEEECCEEEEcCC-CCCCcHHHHHHH-cCCCC---------CCcEEEEE----------CCEECChHHcCcccCCCCCEE
Confidence 5799999988751 146899999984 67661 11235666 45544443222122 256666
Q ss_pred EEeecCC
Q 000981 94 TTSEGLG 100 (1202)
Q Consensus 94 ~TvEgl~ 100 (1202)
.-+--+|
T Consensus 61 EIv~~Vg 67 (78)
T 2k5p_A 61 EFLYFMG 67 (78)
T ss_dssp EECCCCC
T ss_pred EEEeeec
Confidence 6665554
No 102
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=27.95 E-value=33 Score=28.06 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCCCccEEEEEcccCC---CCCCCC
Q 000981 813 AHATIARCLGIPEHNVRVITRRVGG---AFGGKA 843 (1202)
Q Consensus 813 ~r~~vA~~Lglp~~kV~V~~~~vGG---gFGgK~ 843 (1202)
+-+.+++.||+|++.|.|....+-. ||||+.
T Consensus 24 lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 24 LTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred HHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 3467888999999999999887765 788874
No 103
>1erd_A Pheromone ER-2; NMR {Euplotes raikovi} SCOP: a.10.1.1
Probab=24.56 E-value=37 Score=24.60 Aligned_cols=28 Identities=21% Similarity=0.507 Sum_probs=24.7
Q ss_pred HHHHHHhcCCCCCCCCChHHHHHHHHHH
Q 000981 109 IHQRFAGFHASQCGFCTPGMCMSLFSAL 136 (1202)
Q Consensus 109 iq~a~~~~~~~qCG~CtPG~vm~~~~ll 136 (1202)
..|||+.+.-+-||||.--.-|....+-
T Consensus 5 ceqamascehtmcgycqgplymtcigit 32 (40)
T 1erd_A 5 CEQAMASCEHTMCGYCQGPLYMTCIGIT 32 (40)
T ss_dssp HHHHHHHTCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHhccccccccccCCeeEEEEeec
Confidence 5789999999999999998888887765
No 104
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=21.27 E-value=47 Score=30.90 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=25.4
Q ss_pred CCCcccEEEE-EECCEEEEEccCCCCCcHHHHH
Q 000981 7 HGGTRHSVVF-AVNGEKFEVSSVDPSTTLLEFL 38 (1202)
Q Consensus 7 ~~~~~~~i~~-~vNg~~~~~~~~~p~~~L~~~L 38 (1202)
-+|..|.|++ +++|+.++++ |+|+.|+.++=
T Consensus 3 ~~~~~M~I~Vk~l~g~~~~v~-V~~~~TV~dLK 34 (105)
T 1v2y_A 3 SGSSGMTVRVCKMDGEVMPVV-VVQNATVLDLK 34 (105)
T ss_dssp CCCCSEEEEEECSSSCEEEEE-ECTTCBHHHHH
T ss_pred CCCCcEEEEEEecCCCEEEEE-ECCCChHHHHH
Confidence 3566788888 6899999997 89999988753
No 105
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=21.09 E-value=34 Score=36.74 Aligned_cols=16 Identities=44% Similarity=0.947 Sum_probs=14.2
Q ss_pred ccCCCCCCCCccEEEE
Q 000981 48 KLGCGEGGCGACVVLL 63 (1202)
Q Consensus 48 k~gC~~G~CGaCtV~~ 63 (1202)
+-.|+.|.||+|+|-.
T Consensus 223 ~m~CG~G~C~~C~~~~ 238 (262)
T 1ep3_B 223 RMACGIGACYACVEHD 238 (262)
T ss_dssp CCSSSSSSSCTTEEEE
T ss_pred cccCcccccccCCccc
Confidence 3689999999999976
No 106
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=20.67 E-value=46 Score=30.88 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=32.9
Q ss_pred EEEEEE-CCEEEEEccCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 000981 13 SVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1202)
Q Consensus 13 ~i~~~v-Ng~~~~~~~~~p~~~L~~~LR~~~~l~g~k~gC~~G~CGaCtV~~~ 64 (1202)
.|..+| |+++..|+ |.|.+||-|-|-.-+.+.+.- |-.|.|-..
T Consensus 20 ~ir~hLPNqQrT~V~-VrpG~tlrdaL~KaLk~R~L~-------pe~C~Vy~~ 64 (107)
T 1rrb_A 20 TIRVFLPNKQRTVVN-VRNGMSLHDCLMKALKVRGLQ-------PECCAVFRL 64 (107)
T ss_dssp EEEEECTTTCCEEEE-CCTTCBHHHHHHHHHHHHTCC-------TTTEEEEEC
T ss_pred eEEEECCCCCeEEEE-ecCCcCHHHHHHHHHHHcCCC-------HHHceeEEc
Confidence 477777 77787776 899999999987766555542 566888764
Done!