Query 000982
Match_columns 1201
No_of_seqs 370 out of 1039
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:45:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz4_A Protein GBS052; SPAB, G 99.2 6.6E-11 2.2E-15 129.7 12.6 150 48-209 29-220 (239)
2 2pz4_A Protein GBS052; SPAB, G 99.1 9.7E-11 3.3E-15 128.4 9.9 134 871-1007 29-205 (239)
3 3kpt_A Collagen adhesion prote 99.0 3.3E-08 1.1E-12 114.4 22.4 65 47-111 18-84 (355)
4 2x9x_A RRGB, cell WALL surface 98.9 2.6E-09 9E-14 126.7 13.1 148 857-1007 159-401 (444)
5 2xtl_A Cell WALL surface ancho 98.8 5.5E-09 1.9E-13 123.8 10.3 195 784-1007 176-407 (452)
6 3kpt_A Collagen adhesion prote 98.8 5E-07 1.7E-11 104.5 25.8 88 855-943 248-354 (355)
7 2x9x_A RRGB, cell WALL surface 98.8 1.4E-08 4.9E-13 120.4 12.2 144 781-934 171-417 (444)
8 2y1v_A RRGB, cell WALL surface 98.7 1.5E-08 5.1E-13 124.5 10.3 195 780-1007 325-556 (605)
9 1cwv_A Invasin; integrin-bindi 98.6 3.6E-06 1.2E-10 101.4 23.9 225 127-383 29-290 (492)
10 2xtl_A Cell WALL surface ancho 98.6 3.6E-08 1.2E-12 116.8 5.7 213 232-480 177-419 (452)
11 2y1v_A RRGB, cell WALL surface 98.3 9.5E-07 3.3E-11 108.6 10.4 153 49-209 330-571 (605)
12 1cwv_A Invasin; integrin-bindi 98.3 4.2E-05 1.5E-09 92.0 23.9 215 49-294 40-286 (492)
13 3tkv_A FDEC fragment B, attach 98.2 6.8E-06 2.3E-10 97.0 14.1 299 144-459 18-381 (414)
14 3irp_X URO-adherence factor A; 98.2 9.7E-07 3.3E-11 103.7 6.7 76 26-103 306-381 (429)
15 3tkv_A FDEC fragment B, attach 98.2 1E-05 3.4E-10 95.5 13.5 304 48-379 19-383 (414)
16 1d2p_A Collagen adhesin, CNA; 97.9 0.0036 1.2E-07 72.3 28.8 279 51-381 22-355 (373)
17 2x5p_A FBA2, fibronectin bindi 97.8 2.7E-05 9.1E-10 75.7 7.6 61 48-111 39-100 (121)
18 3irp_X URO-adherence factor A; 97.8 2.1E-05 7.3E-10 92.4 7.8 70 126-196 306-378 (429)
19 2x5p_A FBA2, fibronectin bindi 97.6 5.9E-05 2E-09 73.2 5.8 73 932-1007 15-87 (121)
20 3mn8_A LP15968P; catalytic dom 97.5 8.5E-05 2.9E-09 88.1 7.1 67 327-394 338-406 (435)
21 1h8l_A Carboxypeptidase GP180 97.4 0.00013 4.3E-09 85.3 6.4 66 326-393 301-368 (380)
22 2ww8_A RRGA, cell WALL surface 97.4 0.00013 4.6E-09 93.2 6.6 81 854-936 44-128 (893)
23 2nsm_A Carboxypeptidase N cata 97.2 0.00025 8.7E-09 84.3 6.3 63 326-390 321-384 (439)
24 1uwy_A Carboxypeptidase M; met 97.1 0.00039 1.3E-08 82.3 6.7 65 326-392 296-363 (426)
25 3qdh_A Fimbrial structural sub 97.1 0.00026 8.8E-09 79.3 4.4 82 855-936 156-280 (290)
26 3hr6_A SPAA, putative surface- 97.1 0.00045 1.5E-08 81.7 6.0 80 856-935 305-420 (436)
27 1d2p_A Collagen adhesin, CNA; 96.9 0.095 3.3E-06 60.5 24.0 199 52-291 113-348 (373)
28 3pf2_A Cell WALL surface ancho 96.9 0.0022 7.7E-08 72.6 9.5 65 47-111 193-293 (319)
29 2pn5_A TEP1R, thioester-contai 96.8 0.038 1.3E-06 74.5 22.6 206 145-377 128-383 (1325)
30 3pf2_A Cell WALL surface ancho 96.8 0.0012 4.2E-08 74.7 6.9 77 857-934 181-295 (319)
31 2hr0_A Complement C3 beta chai 96.8 0.026 8.8E-07 70.3 19.2 208 151-378 141-405 (645)
32 2ww8_A RRGA, cell WALL surface 96.8 0.0015 5.2E-08 83.6 7.8 66 46-111 57-124 (893)
33 1h8l_A Carboxypeptidase GP180 96.7 0.00099 3.4E-08 77.7 4.7 85 851-942 294-378 (380)
34 3uxf_A Fimbrial subunit type 1 96.6 0.00096 3.3E-08 79.9 4.4 79 856-934 352-472 (488)
35 2nsm_A Carboxypeptidase N cata 96.5 0.0027 9.4E-08 75.4 7.3 64 126-205 321-384 (439)
36 3kcp_A Cellulosomal-scaffoldin 96.5 0.0052 1.8E-07 68.2 8.4 82 308-389 140-231 (321)
37 3qdh_A Fimbrial structural sub 96.4 0.0042 1.4E-07 69.5 7.6 64 48-111 175-276 (290)
38 3hr6_A SPAA, putative surface- 96.4 0.0049 1.7E-07 72.9 8.1 65 47-111 319-417 (436)
39 3mn8_A LP15968P; catalytic dom 96.2 0.0034 1.2E-07 74.3 5.6 88 852-946 331-421 (435)
40 3uxf_A Fimbrial subunit type 1 96.1 0.0077 2.6E-07 72.1 7.7 65 47-111 368-470 (488)
41 1uwy_A Carboxypeptidase M; met 96.1 0.0039 1.3E-07 73.8 5.0 89 851-945 289-381 (426)
42 3qec_A Putative carbohydrate b 96.0 0.0016 5.5E-08 65.1 1.1 55 886-940 86-149 (150)
43 3cu7_A Complement C5; Mg domai 96.0 0.28 9.7E-06 67.6 23.5 88 151-242 159-270 (1676)
44 3t1w_A Four-domain fibronectin 95.9 1.8 6.3E-05 48.8 26.7 277 813-1102 52-350 (375)
45 2boy_A 3-chlorocatechol 1,2-di 95.7 0.009 3.1E-07 65.1 5.3 49 326-374 103-170 (254)
46 2xsu_A Catechol 1,2 dioxygenas 95.3 0.017 5.8E-07 64.6 6.1 49 326-374 137-204 (312)
47 2bum_B Protocatechuate 3,4-dio 95.2 0.018 6.3E-07 62.2 5.8 49 326-374 79-151 (241)
48 3th1_A Chlorocatechol 1,2-diox 95.2 0.017 5.8E-07 63.0 5.4 49 326-374 100-167 (260)
49 1fnf_A Fibronectin; RGD, extra 95.2 5.3 0.00018 44.7 29.2 292 814-1121 52-367 (368)
50 2azq_A Catechol 1,2-dioxygenas 95.1 0.016 5.5E-07 64.8 5.1 49 326-374 133-200 (311)
51 3r8q_A Fibronectin; heparin, F 95.0 1 3.6E-05 49.0 19.7 108 896-1005 73-186 (290)
52 1xpn_A Hypothetical protein PA 94.9 0.0072 2.5E-07 61.5 1.5 54 887-940 107-169 (170)
53 1tmx_A Hydroxyquinol 1,2-dioxy 94.8 0.022 7.6E-07 63.1 5.1 49 326-374 134-200 (293)
54 2b39_A C3; thioester, immune d 94.7 0.17 5.6E-06 69.8 14.6 213 151-378 162-425 (1661)
55 1dmh_A 1,2-CTD, catechol 1,2-d 94.7 0.023 8E-07 63.5 5.1 49 326-374 134-203 (311)
56 1nkg_A Rhamnogalacturonase B; 94.5 0.053 1.8E-06 64.8 7.8 69 127-210 259-327 (508)
57 3t63_M 3,4-PCD, protocatechuat 94.5 0.035 1.2E-06 59.8 5.6 48 326-373 78-149 (238)
58 3n9t_A PNPC; phospholipid bind 94.5 0.033 1.1E-06 61.7 5.4 49 326-374 130-197 (290)
59 3hhy_A 1,2-CTD, catechol 1,2-d 94.4 0.032 1.1E-06 61.4 5.3 49 326-374 132-199 (280)
60 3t63_A 3,4-PCD, protocatechuat 94.4 0.031 1.1E-06 58.8 4.7 49 326-374 49-117 (200)
61 2xsu_A Catechol 1,2 dioxygenas 94.3 0.061 2.1E-06 60.1 7.1 54 127-188 138-205 (312)
62 2xi9_A Ancillary protein 1; ce 94.2 0.062 2.1E-06 63.1 7.4 63 46-111 36-101 (457)
63 2boy_A 3-chlorocatechol 1,2-di 94.2 0.045 1.5E-06 59.6 5.7 51 948-999 105-169 (254)
64 1nkg_A Rhamnogalacturonase B; 94.2 0.045 1.5E-06 65.4 6.2 65 326-394 258-326 (508)
65 2bum_A Protocatechuate 3,4-dio 94.1 0.031 1E-06 59.3 4.2 48 326-373 53-125 (209)
66 3th1_A Chlorocatechol 1,2-diox 93.9 0.059 2E-06 58.7 5.9 52 947-999 101-166 (260)
67 2hr0_A Complement C3 beta chai 93.9 1.8 6.1E-05 53.6 20.2 41 53-93 140-188 (645)
68 3o5u_A Chlorocatechol 1,2-diox 93.8 0.049 1.7E-06 59.3 5.1 49 326-374 104-172 (257)
69 1tdq_A Tenascin-R; extracellul 93.8 3.3 0.00011 44.6 20.0 192 896-1102 67-267 (283)
70 2azq_A Catechol 1,2-dioxygenas 93.7 0.086 2.9E-06 59.0 7.0 56 126-189 133-202 (311)
71 2bum_B Protocatechuate 3,4-dio 93.6 0.073 2.5E-06 57.5 6.0 69 948-1026 81-168 (241)
72 3kcp_A Cellulosomal-scaffoldin 93.6 0.027 9.2E-07 62.6 2.6 67 207-293 144-220 (321)
73 3qva_A Transthyretin-like prot 93.5 0.029 1E-06 53.5 2.4 57 128-192 12-71 (116)
74 2pn5_A TEP1R, thioester-contai 93.5 1.2 4.1E-05 60.1 18.8 206 53-292 136-383 (1325)
75 2xi9_A Ancillary protein 1; ce 93.3 0.07 2.4E-06 62.6 5.7 75 857-934 24-103 (457)
76 3qec_A Putative carbohydrate b 93.0 0.055 1.9E-06 54.1 3.6 30 262-291 85-114 (150)
77 1tmx_A Hydroxyquinol 1,2-dioxy 92.9 0.11 3.8E-06 57.5 6.3 55 126-188 134-201 (293)
78 3e8v_A Possible transglutamina 92.9 0.14 4.7E-06 45.7 5.5 50 329-379 4-61 (82)
79 1fnf_A Fibronectin; RGD, extra 92.9 11 0.00038 42.0 23.3 135 957-1102 120-258 (368)
80 3t63_A 3,4-PCD, protocatechuat 92.7 0.13 4.6E-06 54.0 6.1 54 126-187 49-117 (200)
81 3t63_M 3,4-PCD, protocatechuat 92.7 0.14 4.9E-06 55.0 6.5 57 126-190 78-153 (238)
82 2bum_A Protocatechuate 3,4-dio 92.6 0.11 3.8E-06 55.0 5.4 67 948-1026 55-141 (209)
83 3n9t_A PNPC; phospholipid bind 92.5 0.15 5E-06 56.6 6.4 55 126-188 130-198 (290)
84 2g2n_A Transthyretin-like prot 92.5 0.05 1.7E-06 51.8 2.3 59 128-193 6-71 (114)
85 1dmh_A 1,2-CTD, catechol 1,2-d 92.5 0.11 3.9E-06 58.0 5.5 52 947-999 135-202 (311)
86 3t1w_A Four-domain fibronectin 92.4 6.3 0.00022 44.3 20.4 135 958-1102 122-260 (375)
87 2h0e_A Transthyretin-like prot 92.3 0.051 1.8E-06 52.3 2.1 60 127-193 10-74 (121)
88 1wlh_A Gelation factor; ABP-12 92.2 6.9 0.00023 43.6 20.1 107 266-379 159-279 (311)
89 3hhy_A 1,2-CTD, catechol 1,2-d 92.1 0.16 5.5E-06 55.9 6.1 55 126-188 132-200 (280)
90 1wlh_A Gelation factor; ABP-12 92.0 2.3 7.7E-05 47.6 15.7 135 149-311 143-292 (311)
91 3hrz_A Cobra venom factor; ser 91.9 4.9 0.00017 49.6 19.8 51 326-376 338-392 (627)
92 1xpn_A Hypothetical protein PA 91.9 0.065 2.2E-06 54.5 2.4 29 263-291 106-134 (170)
93 3o5u_A Chlorocatechol 1,2-diox 91.4 0.17 5.8E-06 55.1 5.2 49 948-996 106-169 (257)
94 1f86_A Transthyretin Thr119Met 91.4 0.061 2.1E-06 51.4 1.6 59 128-193 3-69 (115)
95 1oo2_A Transthyretin; retinol- 91.0 0.073 2.5E-06 51.1 1.7 59 128-193 4-70 (119)
96 3qva_A Transthyretin-like prot 91.0 0.15 5E-06 48.7 3.6 91 858-949 10-113 (116)
97 3iwv_A 5-hydroxyisourate hydro 90.7 0.064 2.2E-06 52.7 1.0 60 127-193 27-95 (138)
98 1f86_A Transthyretin Thr119Met 90.7 0.29 9.7E-06 46.8 5.4 94 859-953 2-114 (115)
99 2x9z_A RRGB, cell WALL surface 90.7 0.17 5.9E-06 55.6 4.5 65 857-921 156-228 (262)
100 1qr4_A Protein (tenascin); fib 90.4 12 0.00042 37.3 18.2 132 959-1102 33-166 (186)
101 2h4e_A Transthyretin; amyloid, 90.3 0.099 3.4E-06 50.8 2.0 59 128-193 12-78 (127)
102 4acq_A Alpha-2-macroglobulin; 90.2 4.6 0.00016 54.8 18.5 208 152-376 141-401 (1451)
103 3prx_B Cobra venom factor; imm 90.0 6.1 0.00021 54.0 19.6 207 151-376 161-414 (1642)
104 2gee_A Hypothetical protein; f 89.8 16 0.00054 37.3 18.7 73 922-1005 24-98 (203)
105 2g2n_A Transthyretin-like prot 89.7 0.47 1.6E-05 45.2 6.0 91 858-949 4-111 (114)
106 2h4e_A Transthyretin; amyloid, 89.7 0.45 1.5E-05 46.2 5.9 97 857-954 9-124 (127)
107 2x9z_A RRGB, cell WALL surface 89.7 0.44 1.5E-05 52.4 6.7 52 233-300 173-228 (262)
108 3pdd_A Glycoside hydrolase, fa 89.6 6 0.0002 41.0 15.0 142 326-479 19-178 (190)
109 1oo2_A Transthyretin; retinol- 89.2 0.34 1.2E-05 46.5 4.7 96 858-954 2-116 (119)
110 3pdd_A Glycoside hydrolase, fa 88.9 2.3 8E-05 44.2 11.3 51 327-379 112-163 (190)
111 4ank_A Transthyretin; hormone 88.6 0.15 5.1E-06 50.8 1.8 57 128-191 32-96 (147)
112 3e8v_A Possible transglutamina 88.1 0.53 1.8E-05 42.0 4.8 51 144-195 11-64 (82)
113 4fxk_A Complement C4 beta chai 86.7 6.3 0.00021 48.6 15.3 91 151-242 155-266 (656)
114 1d2o_A Collagen adhesin, CNA; 86.6 14 0.00047 38.3 15.3 128 51-196 22-170 (187)
115 1tdq_A Tenascin-R; extracellul 86.4 3.6 0.00012 44.2 11.6 47 959-1005 223-269 (283)
116 3iwv_A 5-hydroxyisourate hydro 85.9 0.37 1.3E-05 47.3 2.8 97 852-949 20-135 (138)
117 4ank_A Transthyretin; hormone 85.7 0.44 1.5E-05 47.4 3.3 54 327-380 31-98 (147)
118 2vkw_A Neural cell adhesion mo 85.1 14 0.00048 37.6 14.9 51 955-1005 34-89 (209)
119 3tes_A Tencon; fibronectin typ 84.7 5.2 0.00018 36.3 10.0 61 959-1024 28-90 (98)
120 1qfh_A Protein (gelation facto 84.6 8.7 0.0003 40.3 13.1 134 53-195 45-183 (212)
121 1qr4_A Protein (tenascin); fib 84.5 5.2 0.00018 40.1 11.0 47 959-1005 121-168 (186)
122 3r8q_A Fibronectin; heparin, F 84.4 30 0.001 37.1 17.9 132 959-1102 47-184 (290)
123 2gee_A Hypothetical protein; f 83.9 29 0.00098 35.3 16.6 48 958-1005 140-189 (203)
124 1ti6_B Pyrogallol hydroxytrans 83.5 1.3 4.5E-05 48.8 6.3 50 145-196 207-256 (274)
125 2h0e_A Transthyretin-like prot 82.6 0.94 3.2E-05 43.6 4.0 91 857-949 8-118 (121)
126 2k7q_A Filamin-A; IG-like, ABP 81.7 14 0.00047 38.2 12.9 50 146-195 28-80 (191)
127 2j3s_A Filamin-A; cytoskeleton 81.0 41 0.0014 36.9 17.3 110 266-379 147-272 (288)
128 2kbg_A N-CAM 2, neural cell ad 80.6 3.3 0.00011 39.3 7.0 49 956-1004 34-84 (114)
129 2k7p_A Filamin-A; IG-like, ABP 79.3 11 0.00038 38.9 11.2 132 51-193 33-173 (188)
130 2ha1_A Fibronectin; beta sandw 79.2 22 0.00076 35.9 13.6 50 957-1006 27-78 (201)
131 1qfh_A Protein (gelation facto 79.1 62 0.0021 33.7 17.2 107 266-379 60-180 (212)
132 3lpw_A A77-A78 domain from tit 78.9 7 0.00024 39.1 9.5 50 957-1006 131-180 (197)
133 3rfz_B Outer membrane usher pr 78.7 4.1 0.00014 52.0 9.2 104 891-1002 692-801 (843)
134 2j3s_A Filamin-A; cytoskeleton 78.0 85 0.0029 34.3 19.1 49 147-195 129-180 (288)
135 1ti6_B Pyrogallol hydroxytrans 77.8 2.3 7.9E-05 46.9 5.7 45 336-380 206-254 (274)
136 2k7p_A Filamin-A; IG-like, ABP 77.3 24 0.00083 36.3 13.1 46 150-195 35-83 (188)
137 4acq_A Alpha-2-macroglobulin; 77.0 45 0.0016 45.1 18.9 215 776-1003 125-402 (1451)
138 3l5i_A Interleukin-6 receptor 75.3 72 0.0025 33.9 17.0 47 959-1005 127-178 (290)
139 3lpw_A A77-A78 domain from tit 75.0 56 0.0019 32.1 15.1 52 955-1006 32-84 (197)
140 3p4l_A Neogenin; iron homeosta 75.0 29 0.001 35.2 13.2 110 896-1006 63-188 (211)
141 1r6v_A Subtilisin-like serine 74.2 8.5 0.00029 47.7 9.9 50 330-379 452-506 (671)
142 3hrz_A Cobra venom factor; ser 74.1 86 0.0029 38.5 19.0 55 946-1004 338-394 (627)
143 1d2o_A Collagen adhesin, CNA; 73.1 48 0.0016 34.2 13.8 122 145-291 19-161 (187)
144 1wfu_A Unnamed protein product 71.4 6.2 0.00021 37.7 6.2 50 957-1006 47-97 (120)
145 2cum_A Tenascin-X; hexabrachio 70.7 14 0.00049 33.6 8.5 37 982-1023 57-93 (105)
146 3uaf_A TTR-52; beta barrel/san 70.6 4.7 0.00016 38.6 5.1 43 948-991 7-57 (117)
147 2b39_A C3; thioester, immune d 69.3 57 0.002 44.9 17.4 212 777-1005 149-426 (1661)
148 2l4o_A Cell WALL surface ancho 69.3 3.1 0.00011 42.8 3.8 24 167-191 103-128 (181)
149 2crm_A Fibronectin type-III do 67.1 8.9 0.0003 35.6 6.3 50 957-1006 47-97 (120)
150 2db8_A Tripartite motif protei 67.0 7.9 0.00027 35.7 5.9 48 958-1005 39-86 (110)
151 2crz_A Fibronectin type-III do 66.8 6.9 0.00024 35.8 5.4 49 957-1005 38-86 (110)
152 3qht_C Monobody YSMB-1; fibron 66.0 11 0.00037 33.8 6.5 28 978-1005 52-79 (97)
153 2cuh_A Tenascin-X; fibronectin 65.8 15 0.00052 33.9 7.7 26 980-1005 55-80 (115)
154 1x4x_A Fibronectin type-III do 64.6 12 0.00039 34.2 6.5 50 956-1006 34-83 (106)
155 1zlg_A Anosmin 1; insulin-like 63.5 1.1E+02 0.0038 37.6 17.1 25 982-1006 332-356 (680)
156 3hn5_A Putative exported prote 63.5 21 0.00072 37.6 8.7 56 321-378 6-73 (215)
157 2l4o_A Cell WALL surface ancho 63.5 6.5 0.00022 40.5 4.8 48 50-98 57-133 (181)
158 3cu7_A Complement C5; Mg domai 62.2 1.3E+02 0.0043 41.5 18.6 56 949-1005 372-439 (1676)
159 3k2m_C Monobody HA4; engineere 62.1 23 0.00078 32.0 8.0 27 979-1005 55-81 (101)
160 2ibg_A CG9211-PA, GH03927P; IH 61.9 17 0.00059 37.0 7.9 49 957-1005 144-195 (214)
161 2jll_A NCAM2, neural cell adhe 61.3 49 0.0017 36.7 12.3 50 956-1005 319-370 (389)
162 2ibg_A CG9211-PA, GH03927P; IH 61.2 43 0.0015 33.9 10.9 21 984-1004 70-90 (214)
163 2rb8_A Tenascin; beta sheet,lo 61.1 20 0.00067 32.6 7.3 25 980-1004 52-76 (104)
164 2vkw_A Neural cell adhesion mo 61.1 18 0.0006 36.8 7.8 50 956-1005 136-186 (209)
165 1x5x_A Fibronectin type-III do 60.4 18 0.00061 32.8 6.9 50 956-1006 35-86 (109)
166 1j8k_A Fibronectin; EDA, TYPEI 60.0 23 0.00078 31.2 7.4 24 982-1005 53-76 (94)
167 2haz_A N-CAM 1, neural cell ad 59.8 11 0.00037 34.2 5.3 52 954-1005 31-87 (105)
168 3pe9_A Fibronectin(III)-like m 59.4 16 0.00056 33.6 6.3 52 326-379 19-71 (98)
169 2cui_A Tenascin-X; fibronectin 59.3 16 0.00053 34.3 6.3 28 977-1004 63-90 (112)
170 2w1n_A O-GLCNACASE NAGJ; hexos 59.2 16 0.00056 38.6 6.9 29 978-1006 193-222 (238)
171 3prx_B Cobra venom factor; imm 59.1 1.7E+02 0.0058 40.1 18.7 53 948-1004 362-416 (1642)
172 3uaf_A TTR-52; beta barrel/san 58.7 8 0.00027 37.0 4.1 44 126-178 5-56 (117)
173 1f00_I Intimin; immunoglobulin 58.6 7.6 0.00026 42.8 4.6 52 327-379 22-81 (282)
174 3b83_A Ten-D3; beta sheet, com 58.4 23 0.00077 31.9 7.2 25 981-1005 52-76 (100)
175 2dkm_A Collagen alpha-1(XX) ch 58.3 12 0.0004 34.1 5.2 21 985-1005 62-82 (104)
176 2dn7_A Receptor-type tyrosine- 57.8 19 0.00064 32.3 6.6 47 959-1005 36-83 (107)
177 3p4l_A Neogenin; iron homeosta 57.6 1.6E+02 0.0054 29.5 16.3 26 980-1005 60-85 (211)
178 1f00_I Intimin; immunoglobulin 57.3 22 0.00076 39.1 8.0 48 145-192 31-81 (282)
179 3f7q_A Integrin beta-4, GP150; 57.3 1.7E+02 0.006 29.9 15.2 47 959-1005 32-79 (234)
180 4fxt_A Uncharacterized protein 56.5 52 0.0018 34.3 10.2 51 324-376 6-67 (202)
181 3qwq_B Adnectin; cell surface 56.3 19 0.00065 33.6 6.4 46 959-1004 30-77 (114)
182 2v5y_A Receptor-type tyrosine- 55.5 2.5E+02 0.0087 34.4 18.5 26 981-1006 419-444 (731)
183 1bpv_A Titin, A71, connectin; 55.0 19 0.00066 33.4 6.2 51 956-1006 38-90 (112)
184 2ha1_A Fibronectin; beta sandw 54.9 19 0.00065 36.4 6.7 28 978-1005 159-186 (201)
185 2ed8_A Netrin receptor DCC; tu 54.8 25 0.00085 31.5 6.9 46 959-1005 37-82 (106)
186 2jll_A NCAM2, neural cell adhe 54.8 1.1E+02 0.0038 33.7 13.8 50 957-1006 224-274 (389)
187 2yuw_A Myosin binding protein 54.0 13 0.00045 33.8 4.9 25 982-1006 63-87 (110)
188 3fl7_A Ephrin receptor; ATP-bi 54.0 38 0.0013 40.8 10.0 110 895-1005 398-516 (536)
189 1x5z_A Receptor-type tyrosine- 53.6 12 0.00041 34.2 4.5 47 959-1005 45-91 (115)
190 3teu_A Fibcon; FN3 domain, fib 53.3 22 0.00077 31.5 6.2 47 959-1005 28-76 (98)
191 1x4z_A Biregional cell adhesio 53.3 24 0.00082 32.7 6.6 51 956-1006 44-98 (121)
192 3t04_D Monobody 7C12; engineer 52.4 27 0.00092 31.6 6.6 25 981-1005 61-85 (103)
193 2ed9_A Netrin receptor DCC; tu 51.8 39 0.0013 31.1 7.9 47 959-1005 60-106 (124)
194 3rfz_B Outer membrane usher pr 51.3 30 0.001 44.1 8.9 105 268-374 692-801 (843)
195 1cfb_A Drosophila neuroglian; 50.8 2E+02 0.0068 28.6 14.7 49 956-1005 31-83 (205)
196 2dm4_A Sortilin-related recept 50.8 19 0.00066 32.5 5.4 23 983-1005 62-84 (108)
197 2k7q_A Filamin-A; IG-like, ABP 49.5 40 0.0014 34.6 8.1 45 49-93 28-75 (191)
198 3f7q_A Integrin beta-4, GP150; 49.3 33 0.0011 35.6 7.7 22 984-1005 160-181 (234)
199 1bqu_A Protein (GP130); cytoki 49.1 27 0.00091 35.6 6.8 24 982-1005 162-185 (215)
200 1x5f_A Neogenin; RGM binding, 48.7 23 0.0008 32.4 5.7 47 959-1005 48-96 (120)
201 1x5y_A Myosin binding protein 48.4 24 0.00081 32.1 5.6 51 956-1006 36-88 (111)
202 1uem_A KIAA1568 protein; immun 48.0 30 0.001 31.5 6.4 50 957-1006 43-94 (117)
203 2dju_A Receptor-type tyrosine- 47.8 24 0.00082 31.4 5.5 51 956-1006 32-83 (106)
204 1cfb_A Drosophila neuroglian; 47.7 48 0.0016 33.4 8.4 25 982-1006 162-186 (205)
205 2h41_A Fibronectin; beta sandw 47.4 25 0.00085 32.0 5.4 29 976-1004 51-79 (95)
206 2edy_A Receptor-type tyrosine- 47.2 23 0.00079 31.4 5.2 46 959-1005 40-85 (103)
207 2yux_A Myosin-binding protein 47.2 35 0.0012 31.5 6.7 50 957-1006 46-96 (120)
208 1x3d_A Fibronectin type-III do 47.0 19 0.00065 33.1 4.7 25 982-1006 71-95 (118)
209 1x5l_A Ephrin type-A receptor 46.4 27 0.00092 31.5 5.6 25 981-1005 63-87 (111)
210 2wz8_A Cellulosome protein doc 46.2 26 0.0009 35.0 5.9 80 535-630 46-132 (156)
211 2ocf_D Fibronectin; estrogen r 45.8 34 0.0012 32.2 6.4 25 981-1005 79-103 (121)
212 2edb_A Netrin receptor DCC; tu 45.5 35 0.0012 31.5 6.4 25 982-1006 69-93 (116)
213 4fxt_A Uncharacterized protein 43.9 2.3E+02 0.0078 29.5 12.6 114 124-244 6-137 (202)
214 3d33_A Domain of unknown funct 43.8 14 0.00048 34.8 3.1 48 50-97 47-100 (108)
215 2ee2_A Contactin-1; neural cel 43.5 40 0.0014 30.9 6.5 25 982-1006 72-96 (119)
216 2e3v_A Neural cell adhesion mo 43.5 26 0.00089 32.7 5.2 51 955-1005 33-88 (122)
217 2dle_A Receptor-type tyrosine- 43.3 12 0.00041 34.6 2.6 24 982-1005 57-80 (104)
218 1x5g_A Neogenin; RGM binding, 43.1 35 0.0012 31.0 5.9 46 959-1005 47-92 (116)
219 2e7h_A Ephrin type-B receptor 42.8 36 0.0012 30.8 5.9 23 984-1006 64-86 (109)
220 1x5a_A Ephrin type-A receptor 42.5 25 0.00086 32.1 4.8 21 986-1006 64-84 (107)
221 1r6v_A Subtilisin-like serine 42.5 1E+02 0.0035 38.1 11.5 138 861-1002 451-610 (671)
222 2p9r_A Alpha-2-M, alpha-2-macr 42.0 48 0.0016 30.1 6.6 41 151-191 38-85 (102)
223 2yrz_A Integrin beta-4; GP150, 41.7 35 0.0012 31.2 5.7 23 983-1005 72-94 (118)
224 2ede_A Netrin receptor DCC; tu 41.6 46 0.0016 30.0 6.5 47 959-1005 40-90 (114)
225 2djs_A Ephrin type-B receptor 41.3 30 0.001 31.1 5.1 25 982-1006 61-85 (108)
226 1wf5_A Sidekick 2 protein; FNI 40.9 33 0.0011 31.4 5.4 25 982-1006 74-98 (121)
227 3fl7_A Ephrin receptor; ATP-bi 40.2 2.3E+02 0.0079 33.9 13.9 113 982-1102 398-514 (536)
228 1uc6_A CNTF receptor, ciliary 40.1 29 0.00098 31.7 4.8 23 983-1005 66-88 (109)
229 3c12_A FLGD, flagellar protein 40.1 28 0.00094 34.0 4.8 43 147-189 37-90 (138)
230 1x5i_A Neogenin; RGM binding, 39.5 25 0.00087 33.0 4.4 25 981-1005 78-102 (126)
231 2ee3_A Collagen alpha-1(XX) ch 39.4 41 0.0014 31.1 5.7 22 983-1004 59-80 (108)
232 1x4y_A Biregional cell adhesio 39.4 16 0.00054 33.6 2.9 22 984-1005 69-90 (114)
233 3osv_A Flagellar basal-BODY RO 39.3 33 0.0011 33.4 5.3 43 147-189 35-88 (138)
234 1wfn_A Sidekick 2; FN3, cell a 39.1 48 0.0016 30.3 6.2 25 981-1005 71-95 (119)
235 1oww_A FN, fibronectin first t 38.8 21 0.00072 32.5 3.3 27 982-1008 59-85 (98)
236 2dmk_A Midline 2 isoform 2; mi 38.8 20 0.00069 33.9 3.6 24 983-1006 79-102 (127)
237 1q38_A Fibronectin; amyloid fi 38.4 31 0.0011 30.5 4.1 30 975-1004 29-58 (89)
238 1wfo_A Sidekick 2; FN3, cell a 37.9 54 0.0018 30.4 6.5 27 979-1005 80-106 (130)
239 4fxk_A Complement C4 beta chai 37.2 6.2E+02 0.021 30.4 19.9 55 950-1004 369-432 (656)
240 1i1r_A GP130, interleukin-6 re 36.1 81 0.0028 34.0 8.5 24 982-1005 258-281 (303)
241 3n1f_C Cell adhesion molecule- 36.0 65 0.0022 29.0 6.5 23 982-1004 63-85 (102)
242 2p9r_A Alpha-2-M, alpha-2-macr 34.7 38 0.0013 30.9 4.6 43 53-95 37-86 (102)
243 1uen_A KIAA0343 protein; immun 34.7 36 0.0012 31.3 4.6 24 982-1005 78-101 (125)
244 2edd_A Netrin receptor DCC; tu 34.6 22 0.00074 33.6 3.0 23 983-1005 77-99 (123)
245 1wis_A KIAA1514 protein; FNIII 34.4 38 0.0013 31.6 4.7 51 956-1006 44-101 (124)
246 1va9_A DOWN syndrome cell adhe 34.3 22 0.00074 32.7 2.9 22 984-1005 78-99 (122)
247 2ed7_A Netrin receptor DCC; tu 34.3 30 0.001 31.6 3.9 24 982-1005 72-95 (119)
248 1v5j_A KIAA1355 protein, RSGI 33.7 31 0.0011 32.0 3.9 50 956-1005 33-84 (108)
249 2w1n_A O-GLCNACASE NAGJ; hexos 32.8 1.9E+02 0.0064 30.7 9.7 42 336-377 176-219 (238)
250 3l48_A Outer membrane usher pr 32.7 48 0.0016 30.2 4.8 52 945-1000 7-59 (94)
251 3d33_A Domain of unknown funct 32.1 44 0.0015 31.4 4.5 51 145-195 45-101 (108)
252 4eiu_A Uncharacterized hypothe 32.1 84 0.0029 33.7 7.2 56 321-376 5-76 (249)
253 4a2l_A BT_4663, two-component 31.9 30 0.001 43.4 4.5 40 533-579 741-782 (795)
254 3l5i_A Interleukin-6 receptor 31.2 68 0.0023 34.1 6.7 27 980-1006 249-275 (290)
255 1x5j_A Neogenin; RGM binding, 30.7 19 0.00065 33.4 1.8 23 983-1005 67-89 (113)
256 2edx_A Protein tyrosine phosph 30.5 28 0.00094 32.5 3.0 24 982-1005 77-100 (134)
257 2ic2_A CG9211-PA, GH03927P; IH 30.4 44 0.0015 31.0 4.4 22 985-1006 72-93 (115)
258 3hn5_A Putative exported prote 30.1 51 0.0018 34.6 5.1 78 856-938 9-98 (215)
259 1ujt_A KIAA1568 protein; fibro 29.9 28 0.00095 33.0 2.9 22 983-1004 74-95 (120)
260 2dbj_A Proto-oncogene tyrosine 29.8 37 0.0013 31.6 3.7 26 981-1006 76-101 (124)
261 2dlh_A Receptor-type tyrosine- 29.7 24 0.0008 32.4 2.3 24 982-1005 74-97 (121)
262 2c9r_A COPC, copper resistance 29.1 71 0.0024 29.5 5.4 27 177-205 72-101 (102)
263 1uey_A KIAA0343 protein; immun 29.0 55 0.0019 30.3 4.8 23 984-1006 74-96 (127)
264 1zlg_A Anosmin 1; insulin-like 28.8 5E+02 0.017 31.6 14.9 24 982-1005 221-244 (680)
265 4eiu_A Uncharacterized hypothe 28.1 92 0.0032 33.4 6.6 43 52-94 32-78 (249)
266 3ott_A Two-component system se 28.0 33 0.0011 42.7 3.9 38 535-579 709-748 (758)
267 3c12_A FLGD, flagellar protein 28.0 49 0.0017 32.2 4.3 44 50-93 37-91 (138)
268 1x5h_A Neogenin; RGM binding, 27.6 28 0.00095 32.5 2.4 24 982-1005 75-98 (132)
269 2ekj_A Collagen alpha-1(XX) ch 27.2 12 0.0004 34.2 -0.4 24 982-1005 59-82 (105)
270 3l48_A Outer membrane usher pr 27.2 57 0.0019 29.7 4.3 52 852-908 2-54 (94)
271 3v9f_A Two-component system se 27.0 42 0.0014 41.9 4.6 41 532-579 734-776 (781)
272 1wk0_A KIAA0970 protein; fibro 26.9 28 0.00095 34.0 2.3 24 981-1004 79-102 (137)
273 3sd2_A Putative member of DUF3 26.3 50 0.0017 30.5 3.7 49 50-98 43-94 (101)
274 2v5y_A Receptor-type tyrosine- 26.2 9.5E+02 0.032 29.1 21.6 112 983-1101 222-334 (731)
275 3n06_B PRL-R, prolactin recept 26.1 80 0.0027 31.9 5.9 26 980-1005 161-186 (210)
276 1k85_A Chitinase A1; fibronect 23.7 51 0.0017 28.5 3.3 23 984-1006 51-73 (88)
277 2h41_A Fibronectin; beta sandw 23.6 1.3E+02 0.0045 27.1 6.1 43 508-554 35-78 (95)
278 2qbw_A PDZ-fibronectin fusion 23.2 89 0.0031 31.6 5.5 27 980-1006 153-179 (195)
279 3sd2_A Putative member of DUF3 23.0 2E+02 0.0068 26.6 7.0 63 126-196 30-95 (101)
280 1lyq_A PCOC copper resistance 22.9 92 0.0032 28.8 4.9 60 145-206 27-104 (104)
281 2ds4_A Tripartite motif protei 22.2 1.3E+02 0.0045 27.5 6.0 41 53-93 50-95 (113)
282 1axi_B HGHBP, growth hormone r 21.1 84 0.0029 33.0 4.9 26 980-1005 191-216 (236)
283 1bqu_A Protein (GP130); cytoki 20.8 4E+02 0.014 26.4 10.0 25 982-1006 60-85 (215)
284 2d7n_A Filamin-C; beta-sandwic 20.8 1.8E+02 0.0063 26.2 6.4 42 266-311 38-81 (93)
285 2d7n_A Filamin-C; beta-sandwic 20.4 1E+02 0.0035 27.9 4.6 42 52-93 22-66 (93)
286 3rgh_A Filamin-A; cell adhesio 20.2 2E+02 0.0067 26.1 6.6 68 498-580 30-100 (100)
No 1
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.19 E-value=6.6e-11 Score=129.71 Aligned_cols=150 Identities=17% Similarity=0.132 Sum_probs=107.5
Q ss_pred ccccceeEEEEEecccc----------------------cccccccCCCceEEEEeeecceEEE-EEcCCCCCCcCCCce
Q 000982 48 RLDYSHVTVELRTLDGL----------------------VKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKV 104 (1201)
Q Consensus 48 ~i~lsgv~V~L~~~~G~----------------------~~~~t~t~~nG~y~i~~l~~G~Y~l-~~~~P~G~~~~p~~~ 104 (1201)
.-+|+||+|+|+..++. .+.+.+|+.+|.+.|..|++|.|.| ++++|.| .+.+...
T Consensus 29 g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G-~l~~~~~ 107 (239)
T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEK-NRNVSAF 107 (239)
T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEE-CTTBCCE
T ss_pred CCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCC-cccCceE
Confidence 45789999999985433 3344578899999999999999999 8899999 8888888
Q ss_pred eEEEcCCCCCCCcceeEEEeeeEEeeeE--eeeecCccccccCCCCcceeEEEeccCCCee---------------eeee
Q 000982 105 AVTVDDTGCNGNEDINFRFTGFTLLGRV--VGAIGGESCLDKGGGPSNVNVELLSHSGDLI---------------SSVI 167 (1201)
Q Consensus 105 ~v~Vd~~~~s~~~dinf~~~g~~IsG~V--~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i---------------~stt 167 (1201)
.+.+..+ +.+....-...|.+ ... +. +..++.+|+||.|+|++.+|..+ ...+
T Consensus 108 ~v~i~~d-------v~v~~~n~~~~g~~~i~K~-d~--~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~ 177 (239)
T 2pz4_A 108 LVDLSED-------KVIYPKIIWSTGELDLLKV-GV--DGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLE 177 (239)
T ss_dssp EEEESSC-------EEECCCBCCCEEEEEEEEE-EE--ETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEE
T ss_pred EEEeCCC-------eEEEEeeeeeeccEEEEEe-cc--CCCCCcccCCCEEEEEeCCCCEEEeecccceecccccceEEE
Confidence 8887654 22222222223333 221 10 00123799999999998888643 4688
Q ss_pred ecCccceeeeeecCcceeeecc--CCCcEEEEeeeeEEEeeccC
Q 000982 168 TSSEGSYLFKNIIPGKYKLRAS--HPNLSVEVRGSTEVELGFEN 209 (1201)
Q Consensus 168 Td~~G~f~F~~l~PG~Y~l~~~--~~g~~~~~~~~~~V~v~~~~ 209 (1201)
||++|.+.|.+|++|+|+|.+. ..||.+. ...+.|+|..+.
T Consensus 178 Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i~~~~ 220 (239)
T 2pz4_A 178 TDSSGHIRISGLIHGDYVLKEIETQSGYQIG-QAETAVTIEKSK 220 (239)
T ss_dssp CCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CSEEEEEECTTS
T ss_pred ECCCCeEEECCCCCceEEEEEEECCCCcCcC-CccEEEEEeCCC
Confidence 9999999999999999999874 3588865 333677776543
No 2
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.12 E-value=9.7e-11 Score=128.38 Aligned_cols=134 Identities=19% Similarity=0.219 Sum_probs=98.3
Q ss_pred CCCCceeEEEeecCCCc-----------------------ccCccccCCceeeeccccCccccchhh--hhhcccCCCce
Q 000982 871 GEPIPSVLLSLSGDDGY-----------------------RNNSVSWAGGSFHFDNLFPGNFYLRPL--LKEYAFSPPAQ 925 (1201)
Q Consensus 871 ~~pL~~vl~slsg~~~~-----------------------r~n~~T~~~G~~~f~~L~PG~Y~~~~~--~key~~~p~~~ 925 (1201)
++||+||.|.|-..++. ...++||++|.+.|.+|++|.|+|++. ..+ .+++.+.
T Consensus 29 g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G-~l~~~~~ 107 (239)
T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEK-NRNVSAF 107 (239)
T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEE-CTTBCCE
T ss_pred CCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCC-cccCceE
Confidence 68888888887653221 123579999999999999999999986 445 7888899
Q ss_pred eEecCCCcceeEEEEEEEEEEe-eeeeEEee--cCCCCCceeEEEeecccc-ee--------------eeeeecCCCceE
Q 000982 926 AIELGSGESREVIFQATRVAYS-ATGTITLL--SGQPKDGVSVEARSESKG-YY--------------EETVTDTSGSYR 987 (1201)
Q Consensus 926 ~i~v~~G~~~~v~~~~~r~~~s-~~G~V~~~--~g~p~~gv~v~~~~~~~~-~~--------------~~~~Td~~G~~~ 987 (1201)
.|+|.+. ..+...+.+..++ .+-|+++- ++.+|+||.|++...++. +. ...+||++|++.
T Consensus 108 ~v~i~~d--v~v~~~n~~~~g~~~i~K~d~~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~ 185 (239)
T 2pz4_A 108 LVDLSED--KVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIR 185 (239)
T ss_dssp EEEESSC--EEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEE
T ss_pred EEEeCCC--eEEEEeeeeeeccEEEEEeccCCCCCcccCCCEEEEEeCCCCEEEeecccceecccccceEEEECCCCeEE
Confidence 9999764 3333333222222 22344432 238999999999975432 22 578999999999
Q ss_pred eecccCCceEEEEEEEecCC
Q 000982 988 LRGLHPDTTYVIKVVKKDGF 1007 (1201)
Q Consensus 988 i~gL~pg~~y~v~~~~~~~~ 1007 (1201)
+.+|.+|.||.++++++++|
T Consensus 186 ~~~L~~G~Y~l~EtkAP~GY 205 (239)
T 2pz4_A 186 ISGLIHGDYVLKEIETQSGY 205 (239)
T ss_dssp EEEEESEEEEEEEEECCTTB
T ss_pred ECCCCCceEEEEEEECCCCc
Confidence 99999999999999998775
No 3
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.96 E-value=3.3e-08 Score=114.42 Aligned_cols=65 Identities=17% Similarity=0.280 Sum_probs=55.6
Q ss_pred cccccceeEEEEEecccccc-cccccCCCceEEEEeeecceEEE-EEcCCCCCCcCCCceeEEEcCC
Q 000982 47 ARLDYSHVTVELRTLDGLVK-ESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 47 ~~i~lsgv~V~L~~~~G~~~-~~t~t~~nG~y~i~~l~~G~Y~l-~~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
..-.|+||+|+|++.+|..+ .+.+|+.+|.+.+..|++|.|.| |.++|.||...+..+.+.|..+
T Consensus 18 ~~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~~~~~~f~v~~~ 84 (355)
T 3kpt_A 18 NEKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNS 84 (355)
T ss_dssp GGCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEECSC
T ss_pred CCCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcCCceEEEEEecC
Confidence 34579999999999998776 34577889999999999999999 8899999999988888888763
No 4
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.95 E-value=2.6e-09 Score=126.65 Aligned_cols=148 Identities=12% Similarity=0.150 Sum_probs=106.6
Q ss_pred cccEEEEEEecCCCCCCC-----ceeEEEeecCCC---cccCccccCCceeeeccc-cCccccchhh-hhhcccCC----
Q 000982 857 LSQISVRIYSKDDAGEPI-----PSVLLSLSGDDG---YRNNSVSWAGGSFHFDNL-FPGNFYLRPL-LKEYAFSP---- 922 (1201)
Q Consensus 857 l~~i~v~v~~~~~~~~pL-----~~vl~slsg~~~---~r~n~~T~~~G~~~f~~L-~PG~Y~~~~~-~key~~~p---- 922 (1201)
.|+|.|++.+++ |++| ++|.|.|...+. ....++||++|.+.|.+| +||+|+|++. +.+|.++.
T Consensus 159 ~G~i~i~K~d~~--g~~l~~~~g~~A~F~L~~~~~~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a~GY~l~~~~~~ 236 (444)
T 2x9x_A 159 NGDLTLTKTWVD--ATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEIT 236 (444)
T ss_dssp TSCEEEEEEEEC--TTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCC
T ss_pred cceEEEEEecCC--CCCcccccCCceEEEEEECCCCcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEecCceEecccccC
Confidence 899999999986 6655 459999988642 334688999999999999 9999999975 47898763
Q ss_pred CceeEecCCCcc---eeEEEE-EEEE-EEeeeeeEEeecCCCCCceeEEEeecc--cce---------------------
Q 000982 923 PAQAIELGSGES---REVIFQ-ATRV-AYSATGTITLLSGQPKDGVSVEARSES--KGY--------------------- 974 (1201)
Q Consensus 923 ~~~~i~v~~G~~---~~v~~~-~~r~-~~s~~G~V~~~~g~p~~gv~v~~~~~~--~~~--------------------- 974 (1201)
.+..|+|++... ..+... .... ....+-||++ +|++|+||.|++.+.+ +.+
T Consensus 237 ~~~~vtI~~~~~~~~~~~~~~~~~v~~g~v~~~KvD~-~~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y 315 (444)
T 2x9x_A 237 TAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKD 315 (444)
T ss_dssp STTEEEEEEECCCCCCCBCCCCCEEECEEEEEEEECT-TCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHH
T ss_pred CcEEEEEeccccccccccccccceEEeeeEEEEEECC-CCCCcCCcEEEEEecCCCCcEEeeecccccccccccccccce
Confidence 555666654322 000000 0001 1223445554 5699999999998554 211
Q ss_pred -----------------------------------------------------eeeeeecCCCceEeecccCCceEEEEE
Q 000982 975 -----------------------------------------------------YEETVTDTSGSYRLRGLHPDTTYVIKV 1001 (1201)
Q Consensus 975 -----------------------------------------------------~~~~~Td~~G~~~i~gL~pg~~y~v~~ 1001 (1201)
....+||++|.|+|.||.||.||.+++
T Consensus 316 ~~~EAp~gY~~~t~e~~~~~~~~kid~~~~~l~gA~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~Et 395 (444)
T 2x9x_A 316 ALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEET 395 (444)
T ss_dssp HHHHHHHHHHTSCCC------CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEE
T ss_pred eeeecccccccccccccccceeeeecccccccccceeecccceeeccccccCceeEEEECCCCeEEECCCCCceEEEEEe
Confidence 135789999999999999999999999
Q ss_pred EEecCC
Q 000982 1002 VKKDGF 1007 (1201)
Q Consensus 1002 ~~~~~~ 1007 (1201)
+++.+|
T Consensus 396 kAP~GY 401 (444)
T 2x9x_A 396 KQPAGY 401 (444)
T ss_dssp ECCTTS
T ss_pred eCCCCc
Confidence 998776
No 5
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.84 E-value=5.5e-09 Score=123.76 Aligned_cols=195 Identities=13% Similarity=0.095 Sum_probs=137.6
Q ss_pred CCCCCc--cEEEEEEecCccccccccceEEE---EeeeCCCcceeccccccCccceeeecCCccceeee----cCCcccc
Q 000982 784 SPPLSG--VNIRIIAAEDSQIASLKKGHLAL---ETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQV----GPNSFSC 854 (1201)
Q Consensus 784 ~p~l~g--v~i~i~~~~~~~~~~~~~g~~~~---~~~Td~~G~f~~~~L~~~~~y~i~a~k~gy~~~~~----~~~~f~~ 854 (1201)
..+|+| |.|+|..++.. ..+.. ++.++.+|++.|..|.....|.+...+.||.++-. +.....+
T Consensus 176 ~~~L~G~~A~F~L~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~~GY~~~~~~~~~g~iti~n 248 (452)
T 2xtl_A 176 NKADETVDAVFTLQVKDGD-------KWVNVDSAKATAATSFKHTFENLDNAKTYRVIERVSGYAPEYVSFVNGVVTIKN 248 (452)
T ss_dssp CEEEEEEEEEEEEEEEETT-------EEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEECSSSEEEEEEEETTEEEEEE
T ss_pred cccCCCceEEEEEEECCCc-------eEEEeccceeeecccceEEEccCCCCccEEEEEeeCCcccceeccccceEEEec
Confidence 357888 99999876542 11111 34578999999999985568999888899988621 0011111
Q ss_pred ----------------cccccEEEEEEecCCCCCCCceeEEEeecCCC-cccCccccCCceeeeccccCccccchhhhhh
Q 000982 855 ----------------QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-YRNNSVSWAGGSFHFDNLFPGNFYLRPLLKE 917 (1201)
Q Consensus 855 ----------------~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~-~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~ke 917 (1201)
...|++.+.++|++ .+++|+||.|.|.. ++ |.. +.+|++|++.+.+|+||.|.+....+.
T Consensus 249 ~k~~~~p~p~~p~~~~v~tg~~~~~KvD~~-~~~~L~GA~F~l~~-~g~~~~-~~t~~~g~~~~~~l~~~~~~~~kAp~g 325 (452)
T 2xtl_A 249 NKDSNEPTPINPSEPKVVTYGRKFVKTNKD-GKERLAGATFLVKK-DGKYLA-RKSGVATDAEKAAVDSTKSALDAAVKA 325 (452)
T ss_dssp EECTTSCCCBCCCCCEEECEEEEEEEECSS-SSCBCSCCEEEEEE-TTEEEE-EECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCccccCCCcceEEEccEEEEEECCC-CCcccCCCEEEEEE-CCEEEE-EeeccccceeecccCcchhhhhhcchh
Confidence 12689999888874 35899999999987 55 555 889999999999999999988777788
Q ss_pred cccCCCceeEecCCCcceeEEEEEEEEEEeeeeeE-----Ee---ecCCCCCce--eEEEeecc-cceeeeeeecCCCce
Q 000982 918 YAFSPPAQAIELGSGESREVIFQATRVAYSATGTI-----TL---LSGQPKDGV--SVEARSES-KGYYEETVTDTSGSY 986 (1201)
Q Consensus 918 y~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V-----~~---~~g~p~~gv--~v~~~~~~-~~~~~~~~Td~~G~~ 986 (1201)
|...-.. .+. ...|+| ++ -.+..+.|+ .|+.++.. .......+||++|+|
T Consensus 326 Y~~~~~~-------~~~------------~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G~~ 386 (452)
T 2xtl_A 326 YNDLTKE-------KQE------------GQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQF 386 (452)
T ss_dssp HHTSCHH-------HHT------------SHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTSEE
T ss_pred hhccccc-------ccc------------ccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCCeE
Confidence 8743110 000 012222 11 123344444 47877553 345678999999999
Q ss_pred EeecccCCceEEEEEEEecCC
Q 000982 987 RLRGLHPDTTYVIKVVKKDGF 1007 (1201)
Q Consensus 987 ~i~gL~pg~~y~v~~~~~~~~ 1007 (1201)
.|.||.||+||.++++++.+|
T Consensus 387 ~~~~L~~G~Y~l~EtkAP~GY 407 (452)
T 2xtl_A 387 EITGLTEGQYSLEETQAPTGY 407 (452)
T ss_dssp EEEEECSEEEEEEEEECCTTB
T ss_pred EECCCCCceEEEEEeeCCCCc
Confidence 999999999999999998776
No 6
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.82 E-value=5e-07 Score=104.48 Aligned_cols=88 Identities=10% Similarity=0.195 Sum_probs=72.8
Q ss_pred cccccEEEEEEecCCCCCCCceeEEEeecCCCc-cc------CccccCCceeeeccccCccccchhh--hh---------
Q 000982 855 QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGY-RN------NSVSWAGGSFHFDNLFPGNFYLRPL--LK--------- 916 (1201)
Q Consensus 855 ~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~-r~------n~~T~~~G~~~f~~L~PG~Y~~~~~--~k--------- 916 (1201)
...|.|.+++.|.+ ++++|+||.|.|...++- -. ..+||++|.+.|.+|.+|+|+|+++ +.
T Consensus 248 ~~tg~i~i~K~d~~-~~~~L~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~~aP~~~~~~~~~~ 326 (355)
T 3kpt_A 248 PTTGIIELTKIDSA-NKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKT 326 (355)
T ss_dssp ECEEEEEEEEEETT-TCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCEE
T ss_pred ecccceEEEEEeCC-CCcccCCCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEEECCCCcccccccC
Confidence 34688999999874 478999999999866541 11 4679999999999999999999987 45
Q ss_pred hcccCCCceeEecCC-CcceeEEEEEEE
Q 000982 917 EYAFSPPAQAIELGS-GESREVIFQATR 943 (1201)
Q Consensus 917 ey~~~p~~~~i~v~~-G~~~~v~~~~~r 943 (1201)
+|.+...++.|+|.+ |++..+++.+++
T Consensus 327 GY~~~~~~~~~~i~~~~~~~~~~i~N~K 354 (355)
T 3kpt_A 327 SYQLLKDPIDVKISENNQTVKLTIENNK 354 (355)
T ss_dssp ECCCCCSCEEEECBTTBCEEEEEEEECC
T ss_pred CcccCCCcEEEEEccCCcEEEEEEEcCC
Confidence 799999999999975 688888888765
No 7
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.80 E-value=1.4e-08 Score=120.36 Aligned_cols=144 Identities=16% Similarity=0.209 Sum_probs=107.1
Q ss_pred cccCC--CCCccEEEEEEecCccccccccceEEEEeeeCCCcceeccccccCccce--eeecCCccceee--e-cCCcc-
Q 000982 781 GSVSP--PLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYN--VEASKPGYYLRQ--V-GPNSF- 852 (1201)
Q Consensus 781 G~v~p--~l~gv~i~i~~~~~~~~~~~~~g~~~~~~~Td~~G~f~~~~L~~~~~y~--i~a~k~gy~~~~--~-~~~~f- 852 (1201)
|+..+ +++||.|+|...+. ++.+.....||++|++.|..|.+...|. ++.+ +||.++. . .++.|
T Consensus 171 g~~l~~~~g~~A~F~L~~~~~-------~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a-~GY~l~~~~~~~~~~vt 242 (444)
T 2x9x_A 171 ATGAPIPAGAEATFDLVNAQA-------GKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSADYQEITTAGEIA 242 (444)
T ss_dssp TTSCBCCCCSCEEEEEEETTT-------CCEEEEEEECTTCCEEEECSCCTTSCEEEEECCB-TTBEEEECCCCSTTEEE
T ss_pred CCCcccccCCceEEEEEECCC-------CcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEec-CceEecccccCCcEEEE
Confidence 55443 55669999987653 2345567899999999999994323555 4445 9999984 1 11111
Q ss_pred -c---------------ccccccEEEEEEecCCCCCCCceeEEEeecCC--C----------------------------
Q 000982 853 -S---------------CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD--G---------------------------- 886 (1201)
Q Consensus 853 -~---------------~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~--~---------------------------- 886 (1201)
. ....|+|.+.++|++ +.+|+||.|.|...+ +
T Consensus 243 I~~~~~~~~~~~~~~~~~v~~g~v~~~KvD~~--~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y~~~EA 320 (444)
T 2x9x_A 243 VKNWKDENPKPLDPTEPKVVTYGKKFVKVNDK--DNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRA 320 (444)
T ss_dssp EEEECCCCCCCBCCCCCEEECEEEEEEEECTT--CCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccceEEeeeEEEEEECCC--CCCcCCcEEEEEecCCCCcEEeeecccccccccccccccceeeeec
Confidence 1 123688999999885 599999999998665 2
Q ss_pred -------------------------------------c----------ccCccccCCceeeeccccCccccchhh--hhh
Q 000982 887 -------------------------------------Y----------RNNSVSWAGGSFHFDNLFPGNFYLRPL--LKE 917 (1201)
Q Consensus 887 -------------------------------------~----------r~n~~T~~~G~~~f~~L~PG~Y~~~~~--~ke 917 (1201)
| ...++||++|.|.|.+|+||.|+|++. +.+
T Consensus 321 p~gY~~~t~e~~~~~~~~kid~~~~~l~gA~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~EtkAP~G 400 (444)
T 2x9x_A 321 VAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAG 400 (444)
T ss_dssp HHHHHTSCCC------CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTT
T ss_pred ccccccccccccccceeeeecccccccccceeecccceeeccccccCceeEEEECCCCeEEECCCCCceEEEEEeeCCCC
Confidence 1 124789999999999999999999987 679
Q ss_pred cccCCCceeEecCCCcc
Q 000982 918 YAFSPPAQAIELGSGES 934 (1201)
Q Consensus 918 y~~~p~~~~i~v~~G~~ 934 (1201)
|.+...++.|+|.+++.
T Consensus 401 Y~l~~~~~~f~i~~~~~ 417 (444)
T 2x9x_A 401 YALLTSRQKFEVTATSY 417 (444)
T ss_dssp SCCCCSCEEEEECTTTT
T ss_pred cccCCCcEEEEEeCCcc
Confidence 99999999999998754
No 8
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.75 E-value=1.5e-08 Score=124.48 Aligned_cols=195 Identities=12% Similarity=0.149 Sum_probs=132.6
Q ss_pred ecccCCCCCc--cEEEEEEecCccccccccceEEEEeeeCCCcceecccccc--CccceeeecCCccceeee---cCCcc
Q 000982 780 EGSVSPPLSG--VNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYD--DITYNVEASKPGYYLRQV---GPNSF 852 (1201)
Q Consensus 780 ~G~v~p~l~g--v~i~i~~~~~~~~~~~~~g~~~~~~~Td~~G~f~~~~L~~--~~~y~i~a~k~gy~~~~~---~~~~f 852 (1201)
.|....+|+| |.|+|..+++. ..+...+.++.+|++.|..|.+ .+.+.++.+ +||.++.. .++.|
T Consensus 325 ~g~~~~~L~G~~A~F~l~~~~~~-------~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a-~GY~l~~~~~~~~~~v 396 (605)
T 2y1v_A 325 DATGAPIPAGAEATFDLVNAQTG-------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSADYQEITTAGEI 396 (605)
T ss_dssp ETTSCBCCCCSCEEEEEEETTTC-------CEEEEEEECTTCCEEEECSCCTTSCEEEEECCB-TTBEEEECCCCSTTEE
T ss_pred CCCcccccCCceEEEEEEECCCC-------eEEEeeeccCCceEEEEecCCCCccEEEEEeec-CceeccccccccceEE
Confidence 3544568999 99999887642 1234566788888999999943 344455566 99999851 11111
Q ss_pred --c---------------ccccccEEEEEEecCCCCCCCceeEEEeecCC--C----cccCccccCCceeeeccccCccc
Q 000982 853 --S---------------CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD--G----YRNNSVSWAGGSFHFDNLFPGNF 909 (1201)
Q Consensus 853 --~---------------~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~--~----~r~n~~T~~~G~~~f~~L~PG~Y 909 (1201)
. ....|++.+.++|++ +++|+||.|.|...+ + ++.+++|+++|+ +|+||+|
T Consensus 397 ti~n~~~~~p~~~~~~~~~v~tg~v~~~KvD~~--~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~----~l~~g~y 470 (605)
T 2y1v_A 397 AVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDK--DNRLAGAEFVIANADNAGQYLARKADKVSQEEKQ----LVVTTKD 470 (605)
T ss_dssp EEEEEECCCCCCBCCCCCEEECEEEEEEEECTT--CCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHH----HHHHHHH
T ss_pred EEeeccccCccccccCcceEEeeeEEEEEECCC--CCCcCCCEEEEEecCCCCcEEEeccccccccccc----ccccccc
Confidence 1 122588999999885 499999999998775 3 356789999997 9999999
Q ss_pred cchhhhhhcccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEEeecCCCCC------ceeEEEeecc-cceeeeeeecC
Q 000982 910 YLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKD------GVSVEARSES-KGYYEETVTDT 982 (1201)
Q Consensus 910 ~~~~~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~~~~g~p~~------gv~v~~~~~~-~~~~~~~~Td~ 982 (1201)
.|.+..+.|...-. .+...+ ..-+|.+.. ..+. +..|+.++.. ..-....+||+
T Consensus 471 ~~~ea~~gY~~~~~--------~~~~~~----------~~~kvd~~~-~~~~~a~~~a~~~~~~~~~~~~~~~~~~~t~~ 531 (605)
T 2y1v_A 471 ALDRAVAAYNALTA--------QQQTQQ----------EKEKVDKAQ-AAYNAAVIAANNAFEWVADKDNENVVKLVSDA 531 (605)
T ss_dssp HHHHHHHHHHTSCT--------TTCCHH----------HHHHHHHHH-HHHHHHHHHHCSSCEEESCTTSTTBCCEECCT
T ss_pred eecccccccccccc--------ccccce----------eeeeecccc-ccccchhhccccceEEecccccccceeEeeCC
Confidence 99998889953311 111100 122222211 1121 2245655442 22334789999
Q ss_pred CCceEeecccCCceEEEEEEEecCC
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKDGF 1007 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~~~ 1007 (1201)
+|.|.|.||.+|.||.++++++++|
T Consensus 532 ~G~~~~~~L~~G~Y~l~EtkAP~GY 556 (605)
T 2y1v_A 532 QGRFEITGLLAGTYYLEETKQPAGY 556 (605)
T ss_dssp TCEEEEEEECSEEEEEEEEECCTTS
T ss_pred CCEEEECCCCCceEEEEEeeCCCCc
Confidence 9999999999999999999998876
No 9
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.58 E-value=3.6e-06 Score=101.36 Aligned_cols=225 Identities=16% Similarity=0.143 Sum_probs=137.6
Q ss_pred EEeeeEeeeecCccccccCCCCcceeEEEeccCCCee--eeeeecCccceeee--eecCcceeeeccCCCcEEEEeeeeE
Q 000982 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLI--SSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGSTE 202 (1201)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i--~sttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~~~~~~~~ 202 (1201)
.+.-+|.+. +|+|++|..|.+...+|... .+.+||++|.+.+. .-.+|.|.|.++..+-.. +..
T Consensus 29 ~ltatV~D~--------~Gnpv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~s~----s~~ 96 (492)
T 1cwv_A 29 TVEFTVADF--------EGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQ----SVD 96 (492)
T ss_dssp EEEEEEECT--------TSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEE----EEE
T ss_pred EEEEEEEcC--------CCCCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEECCccc----eeE
Confidence 345566654 47999999999986666543 46789999999876 347999999998766322 233
Q ss_pred EEeeccCce-------ee-eeEeecCc---ccceEEEe-ecCceEEEEEEEEeCCcceeecCCCCCCCccccccceeeee
Q 000982 203 VELGFENGE-------VD-DIFFAPGY---EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVS 270 (1201)
Q Consensus 203 V~v~~~~~~-------v~-~~l~i~G~---~vsG~V~~-~g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~T 270 (1201)
+++.++... +. ......|. .+.-+|.+ .|+||+|..|.+....+. +...++
T Consensus 97 v~f~a~~~~a~~s~l~~~~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vtf~~~~g~-----------------~~~~Tt 159 (492)
T 1cwv_A 97 THFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGN-----------------MGVITD 159 (492)
T ss_dssp EEEECCCBCGGGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEESSSE-----------------ECCCEE
T ss_pred EEEeeccCcccceeEEEeccceecCCceeEEEEEEEEcCCCCCcCCcEEEEEECCCc-----------------eeeeEe
Confidence 444433211 10 11122221 23334443 499999999988754211 234567
Q ss_pred cCCcceeec--eecccceeeeeeccccce-----EEeeCC------CceeeEEeeeeeeccceeEEeeeeeeeEEeeCCC
Q 000982 271 DADGKFMFK--SVPCGQYELVPHYKGENT-----VFDVSP------SLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDEND 337 (1201)
Q Consensus 271 D~~G~f~f~--~LppG~Y~v~~~~~~~~~-----~~~~~P------~~~~vtV~~~~~~l~~~f~~~g~sv~G~V~d~~G 337 (1201)
|++|.+++. ...+|.|+|.+...+... .+.+.+ ....+++..+.....- .....+.-+|.|.+|
T Consensus 160 d~~G~at~tlts~~aG~~tVtA~v~g~~~~~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g---~~~~tltatv~D~~G 236 (492)
T 1cwv_A 160 HNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPDILADG---TMSSTLSFVPVDKNG 236 (492)
T ss_dssp CSSSEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEEEECCSSCCTTTCEEEESCSEEETTS---CCCEEEEEECBCTTS
T ss_pred cCCcEEEEEEEccCceEEEEEEEECCccccccceEEEEEccCccccceeeEeecccceeeCC---cceEEEEEEEECCCC
Confidence 899998774 446899999997544321 111111 1122333222111000 012357778999999
Q ss_pred cceeeEE-EEE--cCccc---ccccCCceeeeeee--ecceeEEeeeeeeeeec
Q 000982 338 MGVEGVK-ILV--DGHER---SITDRDGYYKLDQV--TSNRYTIEAVKVHYKFN 383 (1201)
Q Consensus 338 ~pl~Ga~-V~l--~G~~~---~~TDadG~y~~~~L--~pG~Y~I~~~~~~y~~~ 383 (1201)
.||+|.. |.+ +|..+ ..||.+|.|...-. .+|.++|.+...+....
T Consensus 237 Npv~g~~~V~f~~~G~~v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~~g~~~~ 290 (492)
T 1cwv_A 237 HFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDVTITPQVDTLILS 290 (492)
T ss_dssp CBCCSCCSEEEEEEESCCEECCCEECSSCEEEEEECSSCEEEEEEEEETTEECG
T ss_pred CCccCCceEEEecCCceeeeeeEecCCceEEEEEEcCcceEEEEEEEECCcccc
Confidence 9999987 766 66544 36899999988533 46889999887664443
No 10
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.56 E-value=3.6e-08 Score=116.79 Aligned_cols=213 Identities=13% Similarity=0.109 Sum_probs=125.2
Q ss_pred CceEE--EEEEEEeCCcceeecCCCCCCCccccccce----eeeecCCcceeeceec-ccceeeeeeccccceEEeeCCC
Q 000982 232 NPILG--VHIYLYSDDVGKVDCPQGSGNALGERKALC----HAVSDADGKFMFKSVP-CGQYELVPHYKGENTVFDVSPS 304 (1201)
Q Consensus 232 ~Pl~G--a~V~L~~~~~~~~~c~~g~~~~~~~g~~~~----~~~TD~~G~f~f~~Lp-pG~Y~v~~~~~~~~~~~~~~P~ 304 (1201)
.+|+| |.|.|+..+.. .+.. ...++.+|.+.|.+|+ +|.|+|.+...|....|....
T Consensus 177 ~~L~G~~A~F~L~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~~GY~~~~~~~~- 240 (452)
T 2xtl_A 177 KADETVDAVFTLQVKDGD---------------KWVNVDSAKATAATSFKHTFENLDNAKTYRVIERVSGYAPEYVSFV- 240 (452)
T ss_dssp EEEEEEEEEEEEEEEETT---------------EEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEECSSSEEEEEEEE-
T ss_pred ccCCCceEEEEEEECCCc---------------eEEEeccceeeecccceEEEccCCCCccEEEEEeeCCcccceeccc-
Confidence 39999 99999986321 1111 3457899999999997 999999996533322222111
Q ss_pred ceeeEEeeeee-eccceeEE-eeeeeeeEE----eeC-CCcceeeEEEEE--cCccc-ccccCCceeeeeeeecceeEEe
Q 000982 305 LVSMSVRHQHV-TVPEKFQV-TGFSVGGRV----VDE-NDMGVEGVKILV--DGHER-SITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 305 ~~~vtV~~~~~-~l~~~f~~-~g~sv~G~V----~d~-~G~pl~Ga~V~l--~G~~~-~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
...+++..... ..+....+ ..-.+.|.+ +|. ++.+|+||.|.| +|+.+ .+||++|.-.+.+|+||.|...
T Consensus 241 ~g~iti~n~k~~~~p~p~~p~~~~v~tg~~~~~KvD~~~~~~L~GA~F~l~~~g~~~~~~t~~~g~~~~~~l~~~~~~~~ 320 (452)
T 2xtl_A 241 NGVVTIKNNKDSNEPTPINPSEPKVVTYGRKFVKTNKDGKERLAGATFLVKKDGKYLARKSGVATDAEKAAVDSTKSALD 320 (452)
T ss_dssp TTEEEEEEEECTTSCCCBCCCCCEEECEEEEEEEECSSSSCBCSCCEEEEEETTEEEEEECCSCCHHHHHHHHHHHHHHH
T ss_pred cceEEEeccccccCccccCCCcceEEEccEEEEEECCCCCcccCCCEEEEEECCEEEEEeeccccceeecccCcchhhhh
Confidence 12233332211 00000000 000112333 355 447999999999 56555 4789999999999999987765
Q ss_pred eeeeeeeeccceeeEeecCCccccccceeeeeeeeeEEEe--c----------CCceeEEEeccCCCCCCcccccccCCC
Q 000982 375 AVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTV--G----------SGNKVKVALTHGPDKVKPQVKQTDNNG 442 (1201)
Q Consensus 375 ~~~~~y~~~~~~~v~v~p~~~~i~dI~~~~~~v~G~V~~~--~----------~~~~a~VtL~~~~~~~~~~~t~Td~~G 442 (1201)
-...+|..... .... ...|+|... + ........+.+..+.......+||++|
T Consensus 321 kAp~gY~~~~~-------~~~~---------~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G 384 (452)
T 2xtl_A 321 AAVKAYNDLTK-------EKQE---------GQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKG 384 (452)
T ss_dssp HHHHHHHTSCH-------HHHT---------SHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTS
T ss_pred hcchhhhcccc-------cccc---------ccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCC
Confidence 22234532111 0000 011221100 0 001123445432221223567899999
Q ss_pred CeEEE-eCCCceeeeeeecCCCCCcceeecCccceEEee
Q 000982 443 NFCFE-VPPGEYRLSAMAATPESSSGILFLPPYADVVVK 480 (1201)
Q Consensus 443 ~f~f~-L~PG~Y~v~~~~~~~~~~~G~~~~p~~~~V~V~ 480 (1201)
.|.|. |++|.|+|.++. ++.||.+....++|+|.
T Consensus 385 ~~~~~~L~~G~Y~l~Etk----AP~GY~l~~~~~~f~i~ 419 (452)
T 2xtl_A 385 QFEITGLTEGQYSLEETQ----APTGYAKLSGDVSFNVN 419 (452)
T ss_dssp EEEEEEECSEEEEEEEEE----CCTTBCCCSSCEEEEEC
T ss_pred eEEECCCCCceEEEEEee----CCCCcccCCCCEEEEEe
Confidence 99999 999999999998 47899988888888884
No 11
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.33 E-value=9.5e-07 Score=108.56 Aligned_cols=153 Identities=9% Similarity=0.127 Sum_probs=97.9
Q ss_pred cccce--eEEEEEecc-ccccccc-ccCCCceEEEEee-ecceEEE-EEcCCCCCCcCC----CceeEEEcCCCCCCCcc
Q 000982 49 LDYSH--VTVELRTLD-GLVKEST-QCAPNGYYFIPVY-DKGSFVI-KVNGPEGWSWNP----DKVAVTVDDTGCNGNED 118 (1201)
Q Consensus 49 i~lsg--v~V~L~~~~-G~~~~~t-~t~~nG~y~i~~l-~~G~Y~l-~~~~P~G~~~~p----~~~~v~Vd~~~~s~~~d 118 (1201)
..|+| |+|+|++.+ |..+..+ .++.+|.+.|..| ++|+|+| |.++ .||..+. ....++|....-.....
T Consensus 330 ~~L~G~~A~F~l~~~~~~~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a-~GY~l~~~~~~~~~~vti~n~~~~~p~~ 408 (605)
T 2y1v_A 330 PIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSADYQEITTAGEIAVKNWKDENPKP 408 (605)
T ss_dssp BCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCB-TTBEEEECCCCSTTEEEEEEEECCCCCC
T ss_pred cccCCceEEEEEEECCCCeEEEeeeccCCceEEEEecCCCCccEEEEEeec-CceeccccccccceEEEEeeccccCccc
Confidence 36888 999999976 4444332 3344788888888 9999999 6677 9997653 34455554310000111
Q ss_pred eeEEEeeeEEeeeE-eeeecCccccccCCCCcceeEEEeccC--CCee--------------------------------
Q 000982 119 INFRFTGFTLLGRV-VGAIGGESCLDKGGGPSNVNVELLSHS--GDLI-------------------------------- 163 (1201)
Q Consensus 119 inf~~~g~~IsG~V-~~~~g~~s~~~~g~plaGv~V~L~~~~--g~~i-------------------------------- 163 (1201)
++.. ..-.+.|.+ +.+.+ . .+.+|+||.|+|++.+ |+.+
T Consensus 409 ~~~~-~~~v~tg~v~~~KvD----~-~~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~~l~~g~y~~~ea~~gY~~~ 482 (605)
T 2y1v_A 409 LDPT-EPKVVTYGKKFVKVN----D-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNAL 482 (605)
T ss_dssp BCCC-CCEEECEEEEEEEEC----T-TCCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccC-cceEEeeeEEEEEEC----C-CCCCcCCCEEEEEecCCCCcEEEecccccccccccccccccceecccccccccc
Confidence 1100 001123333 22211 1 2489999999999877 6443
Q ss_pred ------------------------------------------eeeeecCccceeeeeecCcceeeeccC--CCcEEEEee
Q 000982 164 ------------------------------------------SSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRG 199 (1201)
Q Consensus 164 ------------------------------------------~sttTd~~G~f~F~~l~PG~Y~l~~~~--~g~~~~~~~ 199 (1201)
...+||++|.|.|.+|++|+|.|.+.. .||.+. ..
T Consensus 483 ~~~~~~~~~~~kvd~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~ 561 (605)
T 2y1v_A 483 TAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALL-TS 561 (605)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEESCTTSTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCC-SS
T ss_pred ccccccceeeeeeccccccccchhhccccceEEecccccccceeEeeCCCCEEEECCCCCceEEEEEeeCCCCcccC-CC
Confidence 245899999999999999999999853 588865 33
Q ss_pred eeEEEeeccC
Q 000982 200 STEVELGFEN 209 (1201)
Q Consensus 200 ~~~V~v~~~~ 209 (1201)
.+.|+|..+.
T Consensus 562 ~~~f~i~~~~ 571 (605)
T 2y1v_A 562 RQKFEVTATS 571 (605)
T ss_dssp CEEEEECTTT
T ss_pred cEEEEEcCCc
Confidence 4778877554
No 12
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.31 E-value=4.2e-05 Score=92.01 Aligned_cols=215 Identities=15% Similarity=0.196 Sum_probs=127.4
Q ss_pred cccceeEEEEEeccccccc--ccccCCCceEEEEe--eecceEEEEEcCCCCCCcCCCceeEEEcCCCCCCCcceeEEEe
Q 000982 49 LDYSHVTVELRTLDGLVKE--STQCAPNGYYFIPV--YDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFT 124 (1201)
Q Consensus 49 i~lsgv~V~L~~~~G~~~~--~t~t~~nG~y~i~~--l~~G~Y~l~~~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf~~~ 124 (1201)
-+++|.+|.+...+|.+.. +..|+++|.+.+.+ ..+|.|.|.++.. |- .....+.+..+... .....+...
T Consensus 40 npv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~-g~---s~s~~v~f~a~~~~-a~~s~l~~~ 114 (492)
T 1cwv_A 40 KPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVE-GQ---RQSVDTHFVKGTIA-ADKSTLAAV 114 (492)
T ss_dssp CBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEET-TE---EEEEEEEEECCCBC-GGGCEEEEE
T ss_pred CCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEEC-Cc---cceeEEEEeeccCc-ccceeEEEe
Confidence 3567999998766676543 34789999998665 4799999987753 31 22344444433111 111122221
Q ss_pred -------e---eEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeee--eecCcceeeeccCCC
Q 000982 125 -------G---FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPN 192 (1201)
Q Consensus 125 -------g---~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~--~l~PG~Y~l~~~~~g 192 (1201)
| ..+.-+|.+. .|+|++|..|.+....|. +...+||++|.+++. ...+|.|.|.+...+
T Consensus 115 ~~~~~A~g~~~~tltatv~Da--------~GNpv~g~~Vtf~~~~g~-~~~~Ttd~~G~at~tlts~~aG~~tVtA~v~g 185 (492)
T 1cwv_A 115 PTSIIADGLMASTITLELKDT--------YGDPQAGANVAFDTTLGN-MGVITDHNDGTYSAPLTSTTLGVATVTVKVDG 185 (492)
T ss_dssp SSEEETTSSCCEEEEEECBBT--------TSCBCCSCCEEEEESSSE-ECCCEECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred ccceecCCceeEEEEEEEEcC--------CCCCcCCcEEEEEECCCc-eeeeEecCCcEEEEEEEccCceEEEEEEEECC
Confidence 1 2333344432 479999999998765554 345667899998875 347899999998877
Q ss_pred cEEEEeeeeEEEeeccCc------e--eee-eEeecCc---ccceEEEe-ecCceEEEE-EEEEeCCcceeecCCCCCCC
Q 000982 193 LSVEVRGSTEVELGFENG------E--VDD-IFFAPGY---EIRGLVVA-QGNPILGVH-IYLYSDDVGKVDCPQGSGNA 258 (1201)
Q Consensus 193 ~~~~~~~~~~V~v~~~~~------~--v~~-~l~i~G~---~vsG~V~~-~g~Pl~Ga~-V~L~~~~~~~~~c~~g~~~~ 258 (1201)
.... ..+..|++..+.. . +.. .....|. .+.-+|.+ .|+||+|.. |.+.....
T Consensus 186 ~~~~-~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g~~~~tltatv~D~~GNpv~g~~~V~f~~~G~------------ 252 (492)
T 1cwv_A 186 AAFS-VPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGV------------ 252 (492)
T ss_dssp EEEE-EEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSCBCCSCCSEEEEEEES------------
T ss_pred cccc-ccceEEEEEccCccccceeeEeecccceeeCCcceEEEEEEEECCCCCCccCCceEEEecCCc------------
Confidence 7643 1234555444321 1 111 1111222 34444444 489999987 76653210
Q ss_pred ccccccceeeeecCCcceeecee--cccceeeeeeccc
Q 000982 259 LGERKALCHAVSDADGKFMFKSV--PCGQYELVPHYKG 294 (1201)
Q Consensus 259 ~~~g~~~~~~~TD~~G~f~f~~L--ppG~Y~v~~~~~~ 294 (1201)
.......||.+|.|...-. .+|.++|.+...+
T Consensus 253 ----~v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~~g 286 (492)
T 1cwv_A 253 ----PVSISPITEQPDSYTATVVGNSVGDVTITPQVDT 286 (492)
T ss_dssp ----CCEECCCEECSSCEEEEEECSSCEEEEEEEEETT
T ss_pred ----eeeeeeEecCCceEEEEEEcCcceEEEEEEEECC
Confidence 0113456899999976533 4788999886544
No 13
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=98.22 E-value=6.8e-06 Score=96.98 Aligned_cols=299 Identities=13% Similarity=0.143 Sum_probs=115.9
Q ss_pred cCCCCcceeEEEe----ccCCCeeeeeeecCccceeee--eecCcceeeeccCCCcEEEEeeeeEEEeeccCceee-eeE
Q 000982 144 KGGGPSNVNVELL----SHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGSTEVELGFENGEVD-DIF 216 (1201)
Q Consensus 144 ~g~plaGv~V~L~----~~~g~~i~sttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~~~~~~~~V~v~~~~~~v~-~~l 216 (1201)
+|+|++|..|.+. ..++..+...+++.+|.|.+. .-.+|.|.|.+.-.+.... ..+..+.+..+..... ..+
T Consensus 18 ~Gnpv~g~~V~~~~~~~~~~~~tl~~~~~~~~G~~t~tlTst~aG~~~VtA~~~~~~~~-~~~~~v~f~a~~~~a~~s~l 96 (414)
T 3tkv_A 18 EGNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSEQYQLG-TLQQTLKFVAGPLDAAHSSI 96 (414)
T ss_dssp -------------------------------------------------------------------CCCCCCCGGGCEE
T ss_pred CCCCCCCceeEEEEeecCCCCceEcccEEcCCcEEEEEEEccCcceEEEEEEEcCcccc-ccceEEEEEcCCCccceEEE
Confidence 3789999888773 233444556677789999754 4478999999876654321 0112333332221100 001
Q ss_pred e------ecCcc--cceEEEe-ecCceEEEEEEEEeCCcceeecCCCCCCCccccccceeeeecCCcceeec---eeccc
Q 000982 217 F------APGYE--IRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK---SVPCG 284 (1201)
Q Consensus 217 ~------i~G~~--vsG~V~~-~g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~---~LppG 284 (1201)
. +.+.. +.=+|.+ .|+|++|..|.+....+. ...+......+++.+|.|++. +-.+|
T Consensus 97 ~~~~~~~~A~g~~t~t~~v~Da~gnpv~g~~V~~~~~~g~-----------~~~~~t~~~~t~~~~G~~tatlT~~t~aG 165 (414)
T 3tkv_A 97 TLNPDKPVVGGTVTAIWTAKDANDNPVTGLNPDAPSLSGA-----------AAAGSTASGWTDNGDGTWTAQISLGTTAG 165 (414)
T ss_dssp EEESSSCBTTSEEEEEEECBCTTCCBCCSCCCCCCEEESG-----------GGTTCEECCCEECSSSEEEEEEECCSCCE
T ss_pred EECCCceecCCEEEEEEEEECCCCCCcCCCEEEEEecCCC-----------cccceeccceEECCCcEEEEEEEeccccc
Confidence 0 01111 1112323 489999877655432110 000011234567899998653 45689
Q ss_pred ceeeeeeccccce-----EEeeCCCc-----eeeEEeeeeeeccceeEEeeeeeeeEEeeCCCcceeeEEEEE--cCc--
Q 000982 285 QYELVPHYKGENT-----VFDVSPSL-----VSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGVEGVKILV--DGH-- 350 (1201)
Q Consensus 285 ~Y~v~~~~~~~~~-----~~~~~P~~-----~~vtV~~~~~~l~~~f~~~g~sv~G~V~d~~G~pl~Ga~V~l--~G~-- 350 (1201)
.|.|.+...+... ...+.+.. ..+.+......-.. ...+.-+|.|.+|.|++|..|.+ ++.
T Consensus 166 ~~~Vta~v~g~~~~~~~~~vtf~a~~~sa~~s~l~~~~~~~~Ag~-----~~t~t~~v~Da~GNpv~g~~V~f~~~~~~~ 240 (414)
T 3tkv_A 166 ELDVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAEDHVKAGE-----STTVTLVAKDAHGNAISGLSLSASLTGTAS 240 (414)
T ss_dssp EEEEECEETTEECSSSCEEEEEBCCSBCTTTCEEEESCSEEETTC-----EEEEEEECBBTTCCBCCSCCEEEEEESGGG
T ss_pred cEEEEEEECCeeccccceeEEEEcCCCcceeeEEEEcccceecCC-----EEEEEEEEEcCCCCCcCCCEEEEEEccCCC
Confidence 9999987544321 11111111 11222211111111 13466678899999999988877 432
Q ss_pred ---cc--ccccCCceeeee---eeecceeEEeeeeeeeeecc-ceeeEeecCCcccccccee--e--------eeeeeeE
Q 000982 351 ---ER--SITDRDGYYKLD---QVTSNRYTIEAVKVHYKFNK-LKEYMVLPNMASIADIKAI--S--------YDICGVV 411 (1201)
Q Consensus 351 ---~~--~~TDadG~y~~~---~L~pG~Y~I~~~~~~y~~~~-~~~v~v~p~~~~i~dI~~~--~--------~~v~G~V 411 (1201)
.+ .+++.+|.|+.. +..+|.|+|.+...+-.... ...+.+.+.......+.+. . ..+.-+|
T Consensus 241 ~~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a~~~~~vt~tv 320 (414)
T 3tkv_A 241 EGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTVKTTTELTFTM 320 (414)
T ss_dssp TTCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBTTCEEEEEEEC
T ss_pred CCceecceEECCCcEEEEEEEcCcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCceeecCCeEEEEEEE
Confidence 12 377899999986 34679999998876643321 1245555543222222211 1 1222222
Q ss_pred EEecC--CceeEEEec--cCCCCC-----CcccccccCCCCeEEEeC----CCceeeeeee
Q 000982 412 RTVGS--GNKVKVALT--HGPDKV-----KPQVKQTDNNGNFCFEVP----PGEYRLSAMA 459 (1201)
Q Consensus 412 ~~~~~--~~~a~VtL~--~~~~~~-----~~~~t~Td~~G~f~f~L~----PG~Y~v~~~~ 459 (1201)
++..+ ..+..|.+. .+.... .....++|++|.|...|. +|.|+|.+..
T Consensus 321 ~D~~GNpv~g~~V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v 381 (414)
T 3tkv_A 321 KDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRV 381 (414)
T ss_dssp BBTTSCBCCSCCCCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEE
T ss_pred EeCCCCCCCCcEEEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEE
Confidence 22222 123333332 111000 012446778888888743 5778888776
No 14
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=98.22 E-value=9.7e-07 Score=103.71 Aligned_cols=76 Identities=21% Similarity=0.304 Sum_probs=67.3
Q ss_pred ecccceeeecchhhccccccCcccccceeEEEEEecccccccccccCCCceEEEEeeecceEEEEEcCCCCCCcCCCc
Q 000982 26 HGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWNPDK 103 (1201)
Q Consensus 26 ~gcgGfv~~~~~~~~~~k~sd~~i~lsgv~V~L~~~~G~~~~~t~t~~nG~y~i~~l~~G~Y~l~~~~P~G~~~~p~~ 103 (1201)
.+.||+|+.+ ..++.++.+.+.+++||+|.|++++|.++.+++|+++|+|.|..|+||.|+|++.+|+||.+.+..
T Consensus 306 ~~igg~Vw~D--~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t~~~ 381 (429)
T 3irp_X 306 GGFGGYVWFD--KNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPTQAN 381 (429)
T ss_dssp EEEEEEEEEC--TTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEECCSS
T ss_pred EEEccEEEEe--CCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEcCCC
Confidence 5568999866 356777788888999999999999999999999999999999999999999999999999987654
No 15
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=98.15 E-value=1e-05 Score=95.55 Aligned_cols=304 Identities=13% Similarity=0.162 Sum_probs=129.4
Q ss_pred ccccceeEEEEE----ecccccccccccCCCceEE--EEeeecceEEEEEcCCCCCCcCCCceeEEEcCCCCCCCcceeE
Q 000982 48 RLDYSHVTVELR----TLDGLVKESTQCAPNGYYF--IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINF 121 (1201)
Q Consensus 48 ~i~lsgv~V~L~----~~~G~~~~~t~t~~nG~y~--i~~l~~G~Y~l~~~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf 121 (1201)
+-+++|..|.+. ..+|-.+....++.+|.|. +-.-.+|.|.|.++.- |.........+.+..+... .....+
T Consensus 19 Gnpv~g~~V~~~~~~~~~~~~tl~~~~~~~~G~~t~tlTst~aG~~~VtA~~~-~~~~~~~~~~v~f~a~~~~-a~~s~l 96 (414)
T 3tkv_A 19 GNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSE-QYQLGTLQQTLKFVAGPLD-AAHSSI 96 (414)
T ss_dssp ------------------------------------------------------------------CCCCCCC-GGGCEE
T ss_pred CCCCCCceeEEEEeecCCCCceEcccEEcCCcEEEEEEEccCcceEEEEEEEc-CccccccceEEEEEcCCCc-cceEEE
Confidence 345567666663 2334444444455689888 3334799999976542 1111111122222222100 000011
Q ss_pred EE--e-----e-eEEeeeEeeeecCccccccCCCCcceeEEEeccCCC-----eeeeeeecCccceeee---eecCccee
Q 000982 122 RF--T-----G-FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGD-----LISSVITSSEGSYLFK---NIIPGKYK 185 (1201)
Q Consensus 122 ~~--~-----g-~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~-----~i~sttTd~~G~f~F~---~l~PG~Y~ 185 (1201)
.. . | -.+.=+|.+. +|+|++|..|......|. .....+++.+|.|.+. .-.+|.|.
T Consensus 97 ~~~~~~~~A~g~~t~t~~v~Da--------~gnpv~g~~V~~~~~~g~~~~~~t~~~~t~~~~G~~tatlT~~t~aG~~~ 168 (414)
T 3tkv_A 97 TLNPDKPVVGGTVTAIWTAKDA--------NDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELD 168 (414)
T ss_dssp EEESSSCBTTSEEEEEEECBCT--------TCCBCCSCCCCCCEEESGGGTTCEECCCEECSSSEEEEEEECCSCCEEEE
T ss_pred EECCCceecCCEEEEEEEEECC--------CCCCcCCCEEEEEecCCCcccceeccceEECCCcEEEEEEEeccccccEE
Confidence 10 0 0 0111134332 479999988876544442 2345677899998765 44589999
Q ss_pred eeccCCCcEEEEeeeeEEEeeccCce-------eeeeEeecCccc--ceEEEe-ecCceEEEEEEEEeCCcceeecCCCC
Q 000982 186 LRASHPNLSVEVRGSTEVELGFENGE-------VDDIFFAPGYEI--RGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGS 255 (1201)
Q Consensus 186 l~~~~~g~~~~~~~~~~V~v~~~~~~-------v~~~l~i~G~~v--sG~V~~-~g~Pl~Ga~V~L~~~~~~~~~c~~g~ 255 (1201)
|.+.-.+-... .....|++.++... +.+.-...|-.. .-+|.+ .|+|++|..|.+......
T Consensus 169 Vta~v~g~~~~-~~~~~vtf~a~~~sa~~s~l~~~~~~~~Ag~~~t~t~~v~Da~GNpv~g~~V~f~~~~~~-------- 239 (414)
T 3tkv_A 169 VMPKLNGQDAA-ANAAKVTVVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTA-------- 239 (414)
T ss_dssp EECEETTEECS-SSCEEEEEBCCSBCTTTCEEEESCSEEETTCEEEEEEECBBTTCCBCCSCCEEEEEESGG--------
T ss_pred EEEEECCeecc-ccceeEEEEcCCCcceeeEEEEcccceecCCEEEEEEEEEcCCCCCcCCCEEEEEEccCC--------
Confidence 99876654321 11234444443321 111111222222 222223 489999988776543100
Q ss_pred CCCccccccceeeeecCCcceeec---eecccceeeeeeccccce-----EEeeCCC-----ceeeEEeeeeeeccceeE
Q 000982 256 GNALGERKALCHAVSDADGKFMFK---SVPCGQYELVPHYKGENT-----VFDVSPS-----LVSMSVRHQHVTVPEKFQ 322 (1201)
Q Consensus 256 ~~~~~~g~~~~~~~TD~~G~f~f~---~LppG~Y~v~~~~~~~~~-----~~~~~P~-----~~~vtV~~~~~~l~~~f~ 322 (1201)
..+..+...+++.+|.|+.. +..+|.|.|.+...+... .+.+.|. ...+++......-..
T Consensus 240 ----~~~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a~~--- 312 (414)
T 3tkv_A 240 ----SEGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTVKT--- 312 (414)
T ss_dssp ----GTTCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBTTC---
T ss_pred ----CCCceecceEECCCcEEEEEEEcCcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCceeecCC---
Confidence 00112335678999999877 457899999987554321 1122111 111222111111000
Q ss_pred EeeeeeeeEEeeCCCcceeeEEEEE---cCcc----------cccccCCceeeeeee---ecceeEEeeeeee
Q 000982 323 VTGFSVGGRVVDENDMGVEGVKILV---DGHE----------RSITDRDGYYKLDQV---TSNRYTIEAVKVH 379 (1201)
Q Consensus 323 ~~g~sv~G~V~d~~G~pl~Ga~V~l---~G~~----------~~~TDadG~y~~~~L---~pG~Y~I~~~~~~ 379 (1201)
...++-+|.|..|.||+|..|.+ +|.. ..+||.+|.|...-- .+|.|+|.+...+
T Consensus 313 --~~~vt~tv~D~~GNpv~g~~V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v~g 383 (414)
T 3tkv_A 313 --TTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRVNG 383 (414)
T ss_dssp --EEEEEEECBBTTSCBCCSCCCCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEETT
T ss_pred --eEEEEEEEEeCCCCCCCCcEEEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEECC
Confidence 13456678899999999999876 3421 147899999988433 5688999888755
No 16
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=97.93 E-value=0.0036 Score=72.30 Aligned_cols=279 Identities=16% Similarity=0.206 Sum_probs=150.0
Q ss_pred cceeEEEEEeccccccccc-ccCC-CceEEEEeeec---c---eEEEEEcCCCCCCcCCCceeEEEcCCCCCCCcceeEE
Q 000982 51 YSHVTVELRTLDGLVKEST-QCAP-NGYYFIPVYDK---G---SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFR 122 (1201)
Q Consensus 51 lsgv~V~L~~~~G~~~~~t-~t~~-nG~y~i~~l~~---G---~Y~l~~~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf~ 122 (1201)
-+.++|+|+- +|....+- .+++ +-.|.|..|+. | .|+|+..+|+||. ..+++. +|.-.
T Consensus 22 P~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lpk~~~G~~i~YtV~E~~~~gY~-------~~~~G~------~ItN~ 87 (373)
T 1d2p_A 22 PEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYT-------TDINGT------TITNK 87 (373)
T ss_dssp CSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEE-------EEEETT------EEEEE
T ss_pred CceEEEEEEe-CCcEeeeEEECCCCCceEEEcCCccCCCCCEEEEEEEecCCCCcE-------EeecCc------EEEec
Confidence 3679999984 67654433 3344 44677777666 4 8999889999985 233331 22211
Q ss_pred E--eeeEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeee---eeecCccceeeeeecCc------ceeeec--c
Q 000982 123 F--TGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISS---VITSSEGSYLFKNIIPG------KYKLRA--S 189 (1201)
Q Consensus 123 ~--~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~s---ttTd~~G~f~F~~l~PG------~Y~l~~--~ 189 (1201)
. ....|+++-.-.+++ + .++..+..++|+|+. +|..+.. ...+.+..|.|.+|+.. .|+|.+ .
T Consensus 88 ~~p~~~~i~VtK~W~D~~--n-~dg~rP~~I~v~L~~-~G~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~Ev~~ 163 (373)
T 1d2p_A 88 YTPGETSATVTKNWDDNN--N-QDGKRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTK 163 (373)
T ss_dssp ECTTEEEEEEEEEEESTT--T-TTSCCCSEEEEEEEE-TTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSC
T ss_pred cCCcceEEEEEEEECCCC--c-ccCCCCceEEEEEEE-CCEEcceEEEEecCCceEEEEccCCcccCCCEEEEEEEEecc
Confidence 1 122344433322121 1 124566789999997 4643332 22356778999999886 899988 4
Q ss_pred CCCcEEEEeee--eEEEeeccCceeeeeEeecCcccceE-EEee-----cCceEEEEEEEEeCCcceeecCCCCCCCccc
Q 000982 190 HPNLSVEVRGS--TEVELGFENGEVDDIFFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGE 261 (1201)
Q Consensus 190 ~~g~~~~~~~~--~~V~v~~~~~~v~~~l~i~G~~vsG~-V~~~-----g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~~ 261 (1201)
.+||.....+. ..+.+..-.. ..-.+|+|. +..+ |.....++|.|+..... +
T Consensus 164 ~~GY~~~~~~~~~~~~tITNt~~-------p~~~~i~v~K~W~d~~~~dg~rP~~I~V~L~~~G~~-~------------ 223 (373)
T 1d2p_A 164 VKGYTTHVDNNDMGNLITTNKYT-------PETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEK-V------------ 223 (373)
T ss_dssp CTTCEEEEECSCTTSEEEEEECC-------CCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEE-E------------
T ss_pred CCCcEEEEcccccccEEEEeccc-------cccccccceEEEcCCCcccccCCceEEEEEecCCeE-e------------
Confidence 57887653221 1222221111 011234443 3332 44456899999985211 0
Q ss_pred cccceeeeecCCcceeeceecc---c---ceeeeeeccccceEEeeCCCceeeEEeeeeeeccceeEEeeeeeeeEEe-e
Q 000982 262 RKALCHAVSDADGKFMFKSVPC---G---QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVV-D 334 (1201)
Q Consensus 262 g~~~~~~~TD~~G~f~f~~Lpp---G---~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sv~G~V~-d 334 (1201)
....+..+.+-+|+|.+||. | .|+|.+..- .++.-.+.. ++|.... .+ ...+|+++-. +
T Consensus 224 --~~~~l~~~~~W~~~f~~Lp~y~~G~~i~YtV~E~~v-~gY~~~~~g----~~ItNt~--~p-----~~~~v~v~K~W~ 289 (373)
T 1d2p_A 224 --KTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHV-KDYTTDING----TTITNKY--TP-----GETSATVTKNWD 289 (373)
T ss_dssp --EEEEECGGGTSEEEEEEEESEETTEECCEEEEECCC-TTEEEEEET----TEEEEEE--CT-----TEEEEEEEEEEE
T ss_pred --eeEEecCCCCcEEEEecCCccCCCcEEEEEEEEecC-CCcEEEEcC----eEEEccc--cc-----ccceeEEEEEEC
Confidence 01223334566999999995 4 488877421 111111110 1111110 01 1123333332 2
Q ss_pred -C---CCcceeeEEEEE--cCcccc-----cccCCceeeeeeeec---c---eeEEeee--eeeee
Q 000982 335 -E---NDMGVEGVKILV--DGHERS-----ITDRDGYYKLDQVTS---N---RYTIEAV--KVHYK 381 (1201)
Q Consensus 335 -~---~G~pl~Ga~V~l--~G~~~~-----~TDadG~y~~~~L~p---G---~Y~I~~~--~~~y~ 381 (1201)
. +|..-+.++|.| +|+... ..+.+..|.|.+|+. | .|+|... .++|.
T Consensus 290 d~~~~~g~rP~si~V~L~~dG~~~~~~~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~~~~~GY~ 355 (373)
T 1d2p_A 290 DNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYT 355 (373)
T ss_dssp SGGGTTSCCCSEEEEEEEETTEEEEEEEEEETTTTTEEEEEEEESEETTEECCEEEEECSCCTTEE
T ss_pred CCCcccCCCCceEEEEEEeCCcEeeeEEEecCCCceEEEEcCCCccCCCCEEEEEEEEecCCCCcE
Confidence 2 233336788877 777652 234456899999986 4 7999764 45664
No 17
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.84 E-value=2.7e-05 Score=75.66 Aligned_cols=61 Identities=18% Similarity=0.275 Sum_probs=52.0
Q ss_pred ccccceeEEEEEecccccccccccCCCceEEEEeeecceEEE-EEcCCCCCCcCCCceeEEEcCC
Q 000982 48 RLDYSHVTVELRTLDGLVKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 48 ~i~lsgv~V~L~~~~G~~~~~t~t~~nG~y~i~~l~~G~Y~l-~~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
.-.|+||+|+|++.+|+.+.+.++ ||.+.+..|++|+|+| |.++|.||... +.+.++|+.+
T Consensus 39 g~~L~GA~F~l~~~~g~~v~~~~s--dG~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~i~ftV~~~ 100 (121)
T 2x5p_A 39 GKELAGATMELRDSSGKTISTWIS--DGQVKDFYLMPGKYTFVETAAPDGYEVA-TAITFTVNEQ 100 (121)
T ss_dssp CCBCCCCEEEEECTTSCEEEEEEC--CSSCEEEEECSEEEEEEEEECCTTCCCC-CCEEEEECTT
T ss_pred CCCcCCCEEEEEECCCCEEEEEEe--CCEEEEcccCCcEEEEEEEeCCCCcccC-CCEEEEEcCC
Confidence 347999999999999988766543 7999999999999999 89999999986 7788888654
No 18
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=97.82 E-value=2.1e-05 Score=92.37 Aligned_cols=70 Identities=23% Similarity=0.301 Sum_probs=57.4
Q ss_pred eEEeeeEeeeec--CccccccCCCCcceeEEEeccCCCeeeeeeecCccceeeeeecCcceeeeccCC-CcEEE
Q 000982 126 FTLLGRVVGAIG--GESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHP-NLSVE 196 (1201)
Q Consensus 126 ~~IsG~V~~~~g--~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~-g~~~~ 196 (1201)
+.|.|.|..+.. +..+ ..+.|++||+|+|++.+|.++.+++||++|.|.|.+|+||.|+|++..| ||.+.
T Consensus 306 ~~igg~Vw~D~n~nG~~D-~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t 378 (429)
T 3irp_X 306 GGFGGYVWFDKNNDGVQN-DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPT 378 (429)
T ss_dssp EEEEEEEEECTTSSSSSC-CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEEC
T ss_pred EEEccEEEEeCCCCCCcC-cCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEc
Confidence 578999976421 1112 2357999999999999999999999999999999999999999998765 88764
No 19
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.60 E-value=5.9e-05 Score=73.23 Aligned_cols=73 Identities=16% Similarity=0.261 Sum_probs=48.7
Q ss_pred CcceeEEEEEEEEEEeeeeeEEeecCCCCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEecCC
Q 000982 932 GESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGF 1007 (1201)
Q Consensus 932 G~~~~v~~~~~r~~~s~~G~V~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~ 1007 (1201)
||+-.+++...+.....+-|++. +|++|+|+.|++.+.++....+.+| ||++.+.+|.||+||..+++++++|
T Consensus 15 g~~g~~ti~~~~~~~v~i~K~D~-~g~~L~GA~F~l~~~~g~~v~~~~s--dG~~~~~~L~~G~Y~l~EtkAP~GY 87 (121)
T 2x5p_A 15 GQSGDMTIEEDSATHIKFSKRDI-DGKELAGATMELRDSSGKTISTWIS--DGQVKDFYLMPGKYTFVETAAPDGY 87 (121)
T ss_dssp ----------CCCEEEEEEEECT-TCCBCCCCEEEEECTTSCEEEEEEC--CSSCEEEEECSEEEEEEEEECCTTC
T ss_pred CCceeEEEecCCcEEEEEEEECC-CCCCcCCCEEEEEECCCCEEEEEEe--CCEEEEcccCCcEEEEEEEeCCCCc
Confidence 44444444333332333445555 7899999999999876656666665 6999999999999999999998765
No 20
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.52 E-value=8.5e-05 Score=88.11 Aligned_cols=67 Identities=19% Similarity=0.298 Sum_probs=54.8
Q ss_pred eeeeEEeeCCCcceeeEEEEEcCc--ccccccCCceeeeeeeecceeEEeeeeeeeeeccceeeEeecCC
Q 000982 327 SVGGRVVDENDMGVEGVKILVDGH--ERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNM 394 (1201)
Q Consensus 327 sv~G~V~d~~G~pl~Ga~V~l~G~--~~~~TDadG~y~~~~L~pG~Y~I~~~~~~y~~~~~~~v~v~p~~ 394 (1201)
.|+|+|+|.+|+||+||.|.+.|. ..++||.+|.|.+ .|+||+|+|++++.+|.....+.+.+..+.
T Consensus 338 gv~G~V~D~~G~pi~gA~V~v~g~~~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~~~~~~v~v~~~~ 406 (435)
T 3mn8_A 338 GIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTNDN 406 (435)
T ss_dssp SEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCCS
T ss_pred eeEEEEECCCCCccCceEEEEecccccceEeCCCCeEEE-ecCCCcEEEEEEEcccccceEEEEEEecCC
Confidence 589999999999999999999874 3468999999977 699999999999999833333356666543
No 21
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.41 E-value=0.00013 Score=85.28 Aligned_cols=66 Identities=21% Similarity=0.205 Sum_probs=54.4
Q ss_pred eeeeeEEeeC-CCcceeeEEEEEcCccc-ccccCCceeeeeeeecceeEEeeeeeeeeeccceeeEeecC
Q 000982 326 FSVGGRVVDE-NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPN 393 (1201)
Q Consensus 326 ~sv~G~V~d~-~G~pl~Ga~V~l~G~~~-~~TDadG~y~~~~L~pG~Y~I~~~~~~y~~~~~~~v~v~p~ 393 (1201)
..|+|+|+|+ +|+||+||.|.+.|... ++||++|.|.+ .|+||+|+|++++.+|..... .+.+..+
T Consensus 301 ~~i~G~V~D~~~g~pi~~A~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~~ 368 (380)
T 1h8l_A 301 RGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTK-TVEVDSK 368 (380)
T ss_dssp CEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEE-EEEECSS
T ss_pred ccceEEEEeCCCCCccCceEEEEecCcceeEECCCEEEEE-ecCCCcEEEEEEEcCccceEE-EEEEcCC
Confidence 4689999997 89999999999966543 68999999998 699999999999999865443 4555444
No 22
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=97.38 E-value=0.00013 Score=93.25 Aligned_cols=81 Identities=14% Similarity=0.237 Sum_probs=67.0
Q ss_pred ccccccEEEEEEecCCCCCCCceeEEEeecCCC-c-ccCccccCCceeeeccccCccccchhh--hhhcccCCCceeEec
Q 000982 854 CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-Y-RNNSVSWAGGSFHFDNLFPGNFYLRPL--LKEYAFSPPAQAIEL 929 (1201)
Q Consensus 854 ~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~-~-r~n~~T~~~G~~~f~~L~PG~Y~~~~~--~key~~~p~~~~i~v 929 (1201)
....|.|.|+++|++ ++||+||.|.|...++ . -...+||++|.+.|.+|.||+|+|++. ..+|.++..+..|+|
T Consensus 44 ~~~~G~~~i~K~d~~--~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v 121 (893)
T 2ww8_A 44 SPAIGKVVIKETGEG--GALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEV 121 (893)
T ss_dssp --CCEEEEEEEECST--TCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEE
T ss_pred CcceEEEEEEEECCC--CCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEE
Confidence 445788999999864 7999999999988753 2 234789999999999999999999987 579999999999999
Q ss_pred CCCccee
Q 000982 930 GSGESRE 936 (1201)
Q Consensus 930 ~~G~~~~ 936 (1201)
.+...+.
T Consensus 122 ~~~g~~~ 128 (893)
T 2ww8_A 122 EKNGRTT 128 (893)
T ss_dssp CTTCCEE
T ss_pred CCCceEE
Confidence 9665443
No 23
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.22 E-value=0.00025 Score=84.26 Aligned_cols=63 Identities=22% Similarity=0.280 Sum_probs=53.2
Q ss_pred eeeeeEEeeCCCcceeeEEEEEcCccc-ccccCCceeeeeeeecceeEEeeeeeeeeeccceeeEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMV 390 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l~G~~~-~~TDadG~y~~~~L~pG~Y~I~~~~~~y~~~~~~~v~v 390 (1201)
..|+|+|+|.+|+||+||.|.+.|... ++||.+|.|.+ .|+||+|+|++++.+|..... .+.+
T Consensus 321 ~~i~G~V~D~~g~pi~gA~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETV-TVTV 384 (439)
T ss_dssp CSEEEEEECTTSCBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEE-EEEE
T ss_pred cceEEEEEcCCCCCccceEEEEEcccceeEECCCCeEEE-ccCCeeEEEEEEecCceeEEE-EEEE
Confidence 468999999999999999999976544 68999999987 799999999999999865443 3444
No 24
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.14 E-value=0.00039 Score=82.28 Aligned_cols=65 Identities=20% Similarity=0.237 Sum_probs=53.0
Q ss_pred eeeeeEEeeCCCcceeeEEEEEcCcc-c--ccccCCceeeeeeeecceeEEeeeeeeeeeccceeeEeec
Q 000982 326 FSVGGRVVDENDMGVEGVKILVDGHE-R--SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLP 392 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l~G~~-~--~~TDadG~y~~~~L~pG~Y~I~~~~~~y~~~~~~~v~v~p 392 (1201)
..|+|+|.|.+|+||+||.|.+.|.. . ++||.+|.|.+ .|+||+|+|.+++.+|..... .+.+..
T Consensus 296 ~~I~G~V~D~~g~pi~gA~V~v~g~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~ 363 (426)
T 1uwy_A 296 LGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHIT-KVIIPE 363 (426)
T ss_dssp CSEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEE-EEEECS
T ss_pred ceeEEEEECCCCCccCceEEEEEeccccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcccEEE-EEEEeC
Confidence 36899999999999999999996543 3 68999999998 699999999999999754443 344444
No 25
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=97.10 E-value=0.00026 Score=79.33 Aligned_cols=82 Identities=10% Similarity=0.183 Sum_probs=58.0
Q ss_pred cccccEEEEEEecCC---CCCCCceeEEEeecCCC-c------------c-----cCccccCCceeeeccc---------
Q 000982 855 QKLSQISVRIYSKDD---AGEPIPSVLLSLSGDDG-Y------------R-----NNSVSWAGGSFHFDNL--------- 904 (1201)
Q Consensus 855 ~~l~~i~v~v~~~~~---~~~pL~~vl~slsg~~~-~------------r-----~n~~T~~~G~~~f~~L--------- 904 (1201)
...|+|.|+++|+++ .+++|+||.|.|-..++ | . ..++||++|.+.|.+|
T Consensus 156 ~~~g~i~i~KvD~~~~~~~~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~ 235 (290)
T 3qdh_A 156 SRWGDLLIKKVDNHQQGQDKAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGA 235 (290)
T ss_dssp EEEEEEEEEEC----------CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCT
T ss_pred EEEeeEEEEEECCCCCcccCcccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccc
Confidence 346899999998853 25899999999876543 1 1 2578999999999999
Q ss_pred --------cCccccchhh--hhhcccCCC---ceeEecCCCccee
Q 000982 905 --------FPGNFYLRPL--LKEYAFSPP---AQAIELGSGESRE 936 (1201)
Q Consensus 905 --------~PG~Y~~~~~--~key~~~p~---~~~i~v~~G~~~~ 936 (1201)
.+|+|+|+++ +.+|.+... ...|+|+.|++..
T Consensus 236 ~~~~~~~~~~~~Y~l~EtkAP~GY~l~~~~~~~~~~~v~~~~~~~ 280 (290)
T 3qdh_A 236 NRDNQKDATARCYVLVETKAPAGYVLPAGDGAVTPVKIEVGAVTT 280 (290)
T ss_dssp TSSCCTTCSEEEEEEEEEECCTTBCCCCGGGGEEEEEEEC-----
T ss_pred cccccccCCCceEEEEEccCCCCeEcCcCcCCceeEEEECCCCcc
Confidence 6899999987 579999987 6778888886544
No 26
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=97.05 E-value=0.00045 Score=81.67 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=67.0
Q ss_pred ccccEEEEEEecCCCCCCCceeEEEeecCCC-c-------------ccCccccCCceeeeccc-----------------
Q 000982 856 KLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-Y-------------RNNSVSWAGGSFHFDNL----------------- 904 (1201)
Q Consensus 856 ~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~-~-------------r~n~~T~~~G~~~f~~L----------------- 904 (1201)
..|+|.|+++|+++.+.+|+||.|.|-..++ + ...++||++|.+.|.+|
T Consensus 305 ~tG~i~i~Kvd~~d~~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~ 384 (436)
T 3hr6_A 305 KFGQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDA 384 (436)
T ss_dssp EEEEEEEEEEETTBCCCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEET
T ss_pred EEeeEEEEEeCCCCCCcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCcccccccccccccccccc
Confidence 4788999999886567999999999876432 1 12468999999999999
Q ss_pred ---cCccccchhh--hhhcccCCCceeEecCCCcce
Q 000982 905 ---FPGNFYLRPL--LKEYAFSPPAQAIELGSGESR 935 (1201)
Q Consensus 905 ---~PG~Y~~~~~--~key~~~p~~~~i~v~~G~~~ 935 (1201)
.+|+|+|+++ ..+|.+.+.++.|+|.+++..
T Consensus 385 ~~~~~g~Y~lvETkAP~GY~l~~~pi~fti~~~~~~ 420 (436)
T 3hr6_A 385 WAGKGTEFCLVETATASGYELLPKPVIVKLEANEST 420 (436)
T ss_dssp TTTSCSEEEEEEEECCTTCBCCSSCEEECCCCCTTC
T ss_pred ccCCCCeEEEEEecCCCCcCcCCCcEEEEEecCCcc
Confidence 5799999987 579999999999999998774
No 27
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=96.95 E-value=0.095 Score=60.47 Aligned_cols=199 Identities=18% Similarity=0.249 Sum_probs=112.4
Q ss_pred ceeEEEEEecccccccc--cccCC-CceEEEEeeecc------eEEEEE-cCCCCCCcCCCceeEEEcCCCCCCCcceeE
Q 000982 52 SHVTVELRTLDGLVKES--TQCAP-NGYYFIPVYDKG------SFVIKV-NGPEGWSWNPDKVAVTVDDTGCNGNEDINF 121 (1201)
Q Consensus 52 sgv~V~L~~~~G~~~~~--t~t~~-nG~y~i~~l~~G------~Y~l~~-~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf 121 (1201)
..|+|+|+. +|..... +.+.+ +..|.|..|+.. .|+|+. ..|+||. ..+.++. +-+|
T Consensus 113 ~~I~v~L~~-~G~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~Ev~~~~GY~-------~~~~~~~-----~~~~ 179 (373)
T 1d2p_A 113 TEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYT-------THVDNND-----MGNL 179 (373)
T ss_dssp SEEEEEEEE-TTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCE-------EEEECSC-----TTSE
T ss_pred ceEEEEEEE-CCEEcceEEEEecCCceEEEEccCCcccCCCEEEEEEEEeccCCCcE-------EEEcccc-----cccE
Confidence 579999995 6765554 23334 557888888776 899966 8899985 2233321 1123
Q ss_pred EEee------eEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeee-eee-cCccceeeeeecC---c---ceeee
Q 000982 122 RFTG------FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISS-VIT-SSEGSYLFKNIIP---G---KYKLR 187 (1201)
Q Consensus 122 ~~~g------~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~s-ttT-d~~G~f~F~~l~P---G---~Y~l~ 187 (1201)
.++. ..|+|+-.-.+++ + ..+..++-++|.|+. +|..+.+ ..+ +.+-.|+|.+||- | .|.|.
T Consensus 180 tITNt~~p~~~~i~v~K~W~d~~--~-~dg~rP~~I~V~L~~-~G~~~~~~~l~~~~~W~~~f~~Lp~y~~G~~i~YtV~ 255 (373)
T 1d2p_A 180 ITTNKYTPETTSSIGEKVWDDKD--N-QDGKRPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVT 255 (373)
T ss_dssp EEEEECCCCEEEEEEEEEEESTT--T-TTSCCCSCEEEEEEE-TTEEEEEEEECGGGTSEEEEEEEESEETTEECCEEEE
T ss_pred EEEeccccccccccceEEEcCCC--c-ccccCCceEEEEEec-CCeEeeeEEecCCCCcEEEEecCCccCCCcEEEEEEE
Confidence 3322 2455544332111 1 135678899999987 4644433 233 3445899999975 4 68888
Q ss_pred cc-CCCcEEEEeeeeEEEeeccCceeeeeEeecCcccceE-EEee-----cCceEEEEEEEEeCCcceeecCCCCCCCcc
Q 000982 188 AS-HPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALG 260 (1201)
Q Consensus 188 ~~-~~g~~~~~~~~~~V~v~~~~~~v~~~l~i~G~~vsG~-V~~~-----g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~ 260 (1201)
+. -+||.....+ ..| . +.....-.+|+++ +..+ |...+.++|.|+... ..+
T Consensus 256 E~~v~gY~~~~~g-~~I--t-------Nt~~p~~~~v~v~K~W~d~~~~~g~rP~si~V~L~~dG-~~~----------- 313 (373)
T 1d2p_A 256 EDHVKDYTTDING-TTI--T-------NKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDG-KAT----------- 313 (373)
T ss_dssp ECCCTTEEEEEET-TEE--E-------EEECTTEEEEEEEEEEESGGGTTSCCCSEEEEEEEETT-EEE-----------
T ss_pred EecCCCcEEEEcC-eEE--E-------cccccccceeEEEEEECCCCcccCCCCceEEEEEEeCC-cEe-----------
Confidence 74 4788755322 122 1 1111111233332 3332 333368999999752 110
Q ss_pred ccccceeeeecCCcceeeceeccc------ceeeeee
Q 000982 261 ERKALCHAVSDADGKFMFKSVPCG------QYELVPH 291 (1201)
Q Consensus 261 ~g~~~~~~~TD~~G~f~f~~LppG------~Y~v~~~ 291 (1201)
+. ......+.+..|+|.+||.. .|+|.+.
T Consensus 314 -~~-~~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~ 348 (373)
T 1d2p_A 314 -GK-TAILNESNNWTHTWTGLDEKAKGQQVKYTVEEL 348 (373)
T ss_dssp -EE-EEEEETTTTTEEEEEEEESEETTEECCEEEEEC
T ss_pred -ee-EEEecCCCceEEEEcCCCccCCCCEEEEEEEEe
Confidence 00 01123345678999999963 6888884
No 28
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=96.87 E-value=0.0022 Score=72.61 Aligned_cols=65 Identities=18% Similarity=0.349 Sum_probs=54.0
Q ss_pred cccccceeEEEEEeccccccc-------------------------ccccCCCceEEEEeee-------cc---eEEE-E
Q 000982 47 ARLDYSHVTVELRTLDGLVKE-------------------------STQCAPNGYYFIPVYD-------KG---SFVI-K 90 (1201)
Q Consensus 47 ~~i~lsgv~V~L~~~~G~~~~-------------------------~t~t~~nG~y~i~~l~-------~G---~Y~l-~ 90 (1201)
....|+||+|+|++.+|..+. .-+|+.+|.+.|..|. +| +|+| |
T Consensus 193 ~~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~~~~G~~~~Y~l~E 272 (319)
T 3pf2_A 193 ETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKE 272 (319)
T ss_dssp SCSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTSCTTCCCEEEEEEE
T ss_pred CCcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccccCCCCcceEEEEE
Confidence 356799999999998875431 1256779999999998 47 9999 8
Q ss_pred EcCCCCCCcCCCceeEEEcCC
Q 000982 91 VNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 91 ~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
.++|.||.+.+..+.++|..+
T Consensus 273 tkAP~GY~l~~~~~~f~v~~~ 293 (319)
T 3pf2_A 273 TKAPEGYVIPDKEIEFTVSQT 293 (319)
T ss_dssp EECCTTBCCCSSCEEEEECTT
T ss_pred eeCCCCcccCCCcEEEEEecC
Confidence 999999999999999999875
No 29
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=96.84 E-value=0.038 Score=74.52 Aligned_cols=206 Identities=16% Similarity=0.144 Sum_probs=109.8
Q ss_pred CCCCcc---eeEEEeccCCCeeeee--eecCccceeee-----eecCcceeeeccCCCc-----EEEE----eeeeEEEe
Q 000982 145 GGGPSN---VNVELLSHSGDLISSV--ITSSEGSYLFK-----NIIPGKYKLRASHPNL-----SVEV----RGSTEVEL 205 (1201)
Q Consensus 145 g~plaG---v~V~L~~~~g~~i~st--tTd~~G~f~F~-----~l~PG~Y~l~~~~~g~-----~~~~----~~~~~V~v 205 (1201)
..|+.. ++|+|.+.+|..+... .++..|.|.++ +...|.|+|++...+- .+.+ .+..+|++
T Consensus 128 ~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i 207 (1325)
T 2pn5_A 128 LKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQV 207 (1325)
T ss_dssp SSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEE
T ss_pred ccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEE
Confidence 355543 7899999999766543 45678887653 3356999999865431 1221 22334444
Q ss_pred eccCceeeeeEeecCcccceEEEe---ecCceEE-EEEEEEeCCcceeecCCCCCCCccccccceeeeecCCcceeecee
Q 000982 206 GFENGEVDDIFFAPGYEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV 281 (1201)
Q Consensus 206 ~~~~~~v~~~l~i~G~~vsG~V~~---~g~Pl~G-a~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~L 281 (1201)
..... ....+-.+..+|.. .|.|++| |.|.+...+.. .....++|.+|.+.+. +
T Consensus 208 ~~~~~-----~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~v~~~~~~----------------~~~~~~~d~~G~~~~~-~ 265 (1325)
T 2pn5_A 208 MPSVI-----PLEEHQAVNLTIEANYHFGKPVQGVAKVELYLDDDK----------------LKLKKELTVYGKGQVE-L 265 (1325)
T ss_dssp EESSC-----CBGGGCEEEEEEEEEESSSCBCEEEEEEEEEETTTT----------------EEEEEEEEEESEEEEE-E
T ss_pred ecCce-----EEecCCeEEEEEEEEEcCCCeeeeEEEEEEEECCCC----------------cceeEEEecCcEEEEE-E
Confidence 32221 11233345555554 3999999 88887654210 0124567888888774 3
Q ss_pred cc-------c--ceeeeeecc--ccce------EEeeCCCceeeEEeeeeeeccceeEEee--eeeeeEEeeCCCcceee
Q 000982 282 PC-------G--QYELVPHYK--GENT------VFDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEG 342 (1201)
Q Consensus 282 pp-------G--~Y~v~~~~~--~~~~------~~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sv~G~V~d~~G~pl~G 342 (1201)
+. . .|.|.+... +.+. .+.+.+....+.+.... . +...| +.+.=.+.+.+|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~v~a~V~e~~tg~~~~~~~~i~i~~~~~~i~~~~~~----~-~~~~g~~~~~~v~~~~~dG~p~~~ 340 (1325)
T 2pn5_A 266 RFDNFAMDADQQDVPVKVSFVEQYTNRTVVKQSQITVYRYAYRVELIKES----P-QFRPGLPFKCALQFTHHDGTPAKG 340 (1325)
T ss_dssp ECSSCCCSSSEEEEEEEEEEEETTTCCEEEEEEEEEEESSSCEEEEEESS----S-SBCTTSCEEEEEEEECTTSCBCTT
T ss_pred ehhHhccccccceEEEEEEEEECCCcEEEEeeEEEEEEEeeEEEEEEeCC----C-cccCCCCEEEEEEEECCCCCcCCC
Confidence 21 1 234444321 1111 11233333333332110 0 11112 23444567889999998
Q ss_pred EE--EEE-c--CcccccccCCceeeeeee--ecceeE-Eeeee
Q 000982 343 VK--ILV-D--GHERSITDRDGYYKLDQV--TSNRYT-IEAVK 377 (1201)
Q Consensus 343 a~--V~l-~--G~~~~~TDadG~y~~~~L--~pG~Y~-I~~~~ 377 (1201)
.. |.+ . .....+||++|...|.-- ..|.|. |++..
T Consensus 341 ~~~~v~~~~~~~~~~~~t~~~G~~~~~~~~~~~g~y~~l~v~~ 383 (1325)
T 2pn5_A 341 ISGKVEVSDVRFETTTTSDNDGLIKLELQPSEGTEQLSIHFNA 383 (1325)
T ss_dssp CEEEEEEGGGTEEEEEECCTTSEEEEEECCCTTCCEEEEEEEC
T ss_pred CceeEEEEEecceEEEEeCCCCcEEEEEECCCCCeEEEEEEEE
Confidence 65 544 2 222358999997666422 247786 77653
No 30
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=96.83 E-value=0.0012 Score=74.73 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=63.4
Q ss_pred cccEEEEEEecCCCCCCCceeEEEeecCCC--cc------------------------cCccccCCceeeecccc-----
Q 000982 857 LSQISVRIYSKDDAGEPIPSVLLSLSGDDG--YR------------------------NNSVSWAGGSFHFDNLF----- 905 (1201)
Q Consensus 857 l~~i~v~v~~~~~~~~pL~~vl~slsg~~~--~r------------------------~n~~T~~~G~~~f~~L~----- 905 (1201)
.|++.|+++|++ ++.+|+||.|.|-..++ ++ ..++||++|.+.|.+|.
T Consensus 181 tg~~~i~KvD~~-~~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~ 259 (319)
T 3pf2_A 181 TGGKRFVKKDST-ETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDA 259 (319)
T ss_dssp CEEEEEEEEETT-SCSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTS
T ss_pred EeeEEEEEeCCC-CCcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccc
Confidence 488899888874 47999999999976543 21 13679999999999999
Q ss_pred --Cc---cccchhh--hhhcccCCCceeEecCCCcc
Q 000982 906 --PG---NFYLRPL--LKEYAFSPPAQAIELGSGES 934 (1201)
Q Consensus 906 --PG---~Y~~~~~--~key~~~p~~~~i~v~~G~~ 934 (1201)
|| +|+|+++ +.+|.+.+.++.|+|.++..
T Consensus 260 ~~~G~~~~Y~l~EtkAP~GY~l~~~~~~f~v~~~~~ 295 (319)
T 3pf2_A 260 NAEGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSY 295 (319)
T ss_dssp CTTCCCEEEEEEEEECCTTBCCCSSCEEEEECTTSS
T ss_pred cCCCCcceEEEEEeeCCCCcccCCCcEEEEEecCCc
Confidence 68 9999987 57999999999999987754
No 31
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=96.80 E-value=0.026 Score=70.35 Aligned_cols=208 Identities=17% Similarity=0.174 Sum_probs=110.0
Q ss_pred eeEEEeccCCCeeee--eeec-Cccceeee-----eecCcceeeeccCCC---cE----EEE----eeeeEEEeeccCce
Q 000982 151 VNVELLSHSGDLISS--VITS-SEGSYLFK-----NIIPGKYKLRASHPN---LS----VEV----RGSTEVELGFENGE 211 (1201)
Q Consensus 151 v~V~L~~~~g~~i~s--ttTd-~~G~f~F~-----~l~PG~Y~l~~~~~g---~~----~~~----~~~~~V~v~~~~~~ 211 (1201)
++|+|.+.+|..+.. ..+| ..|.|.+. +.+.|.|+|++...+ .. +.+ .+..+|.+.....
T Consensus 141 v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~- 219 (645)
T 2hr0_A 141 VMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEK- 219 (645)
T ss_dssp EEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESSS-
T ss_pred EEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCce-
Confidence 688899999976653 3454 78877653 335699999985421 11 221 2334454443221
Q ss_pred eeeeEeecC--cccceEEEee---cCceEE-EEEEEEeC--CcceeecCCCCCCCccccccceeeeecCCcceeece--e
Q 000982 212 VDDIFFAPG--YEIRGLVVAQ---GNPILG-VHIYLYSD--DVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKS--V 281 (1201)
Q Consensus 212 v~~~l~i~G--~~vsG~V~~~---g~Pl~G-a~V~L~~~--~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~--L 281 (1201)
....+ -.+..+|... |.|++| |.|..... +.....| ........+|.+|.|.|.- +
T Consensus 220 ----~~~~~~~~~~~v~v~a~Y~~G~Pv~G~a~v~~~~~~~~~~~~~~----------~~~~~~~~~dg~g~~~l~~~~~ 285 (645)
T 2hr0_A 220 ----FYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRISLP----------ESLKRIPIEDGSGEVVLSRKVL 285 (645)
T ss_dssp ----SEETTCTTCEEEEEEEECTTSCBCCEEEEEEEEEEETTEEEECG----------GGCEEEEEBTTEEEEEECHHHH
T ss_pred ----eEecCCCcEEEEEEEEEEcCCCeeeeEEEEEEEEeeCCeeeecC----------chheeEEeeCCeEEEEEeHHHh
Confidence 12233 4555666653 999999 76654321 1000000 0011356689999998751 1
Q ss_pred ------c------ccceeeeeec-c--ccce------EEeeCCCceeeEEeeeeeeccceeEEee--eeeeeEEeeCCCc
Q 000982 282 ------P------CGQYELVPHY-K--GENT------VFDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDM 338 (1201)
Q Consensus 282 ------p------pG~Y~v~~~~-~--~~~~------~~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sv~G~V~d~~G~ 338 (1201)
+ +..+.+.+.. . +... .+.+.+....+.+... +. +-..| +.+.=.+.+.+|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~v~a~V~e~~g~~~~~~~~~~i~i~~~~~~i~~~~~----~~-~~~~g~~~~~~v~~~~~dG~ 360 (645)
T 2hr0_A 286 LDGVQNLRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPIVTSPYQIHFTKT----PK-YFKPGMPFDLMVFVTNPDGS 360 (645)
T ss_dssp HTSCSSCSGGGGTTCEEEEEEEEEESSSSCEEEEEEEEEEEESCSCEEECSSS----CS-BCCTTSEEEEEEEEECSSSS
T ss_pred hhhhcccccccccCcEEEEEEEEEECCCCeEEEeeeeeEEEEEeeEEEEEEeC----cc-ccCCCCcEEEEEEEEcCCCC
Confidence 1 1134444432 1 1111 1223333333333211 11 11122 2334456788999
Q ss_pred ceeeEEEEE-cC-cccccccCCceeeee-eeec--ceeEEeeeee
Q 000982 339 GVEGVKILV-DG-HERSITDRDGYYKLD-QVTS--NRYTIEAVKV 378 (1201)
Q Consensus 339 pl~Ga~V~l-~G-~~~~~TDadG~y~~~-~L~p--G~Y~I~~~~~ 378 (1201)
|++|+.|.+ .| ....+||++|...|. +++. |.|.|++...
T Consensus 361 p~~~~~v~l~~~~~~~~~t~~~G~~~~~i~~~~~~g~y~l~v~~~ 405 (645)
T 2hr0_A 361 PAYRVPVAVQGEDTVQSLTQGDGVAKLSINTHPSQKPLSITVRTK 405 (645)
T ss_dssp BCSCCCEEESSSCCSCCCCCTTSEEEEEEECCSCSSCEEEEEEEC
T ss_pred ccCCEEEEEecCcceeeEECCCCcEEEEEECCCCCeEEEEEEEEc
Confidence 999999998 44 333589999954442 3443 8899988754
No 32
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=96.77 E-value=0.0015 Score=83.60 Aligned_cols=66 Identities=14% Similarity=0.220 Sum_probs=56.6
Q ss_pred CcccccceeEEEEEeccc-ccccccccCCCceEEEEeeecceEEE-EEcCCCCCCcCCCceeEEEcCC
Q 000982 46 DARLDYSHVTVELRTLDG-LVKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 46 d~~i~lsgv~V~L~~~~G-~~~~~t~t~~nG~y~i~~l~~G~Y~l-~~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
+..-.|+||+|+|++.++ ..+.+.+|+.+|.+.|..|+||+|+| |.++|.||....+.+.++|..+
T Consensus 57 ~~~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v~~~ 124 (893)
T 2ww8_A 57 EGGALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKN 124 (893)
T ss_dssp STTCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECTT
T ss_pred CCCCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEECCC
Confidence 345679999999999774 44555678999999999999999999 8999999999999999998764
No 33
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=96.67 E-value=0.00099 Score=77.69 Aligned_cols=85 Identities=18% Similarity=0.268 Sum_probs=69.9
Q ss_pred cccccccccEEEEEEecCCCCCCCceeEEEeecCCCcccCccccCCceeeeccccCccccchhhhhhcccCCCceeEecC
Q 000982 851 SFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELG 930 (1201)
Q Consensus 851 ~f~~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~ 930 (1201)
.|-.+-.+.|..+|.|. .+|+||+||.+.|.+.. ...+||++|.|.+ .|.||.|.|+....+|+ +..+.|+|.
T Consensus 294 ~~~~~v~~~i~G~V~D~-~~g~pi~~A~V~v~~~~---~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--~~~~~v~v~ 366 (380)
T 1h8l_A 294 QFIKQVHRGIWGFVLDA-TDGRGILNATISVADIN---HPVTTYKDGDYWR-LLVQGTYKVTASARGYD--PVTKTVEVD 366 (380)
T ss_dssp HHHHGGGCEEEEEEEET-TTCSBCTTCEEEETTEE---EEEECCTTSEEEE-CCCSEEEEEEEECTTBC--CEEEEEEEC
T ss_pred hhhhhccccceEEEEeC-CCCCccCceEEEEecCc---ceeEECCCEEEEE-ecCCCcEEEEEEEcCcc--ceEEEEEEc
Confidence 34455568899999997 34899999999999862 3578999999988 69999999999999997 556788999
Q ss_pred CCcceeEEEEEE
Q 000982 931 SGESREVIFQAT 942 (1201)
Q Consensus 931 ~G~~~~v~~~~~ 942 (1201)
++++..+.|...
T Consensus 367 ~~~~~~~~~~L~ 378 (380)
T 1h8l_A 367 SKGGVQVNFTLS 378 (380)
T ss_dssp SSCEEECCEEEC
T ss_pred CCCeEEEEEEec
Confidence 998777776654
No 34
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=96.64 E-value=0.00096 Score=79.85 Aligned_cols=79 Identities=10% Similarity=0.123 Sum_probs=65.2
Q ss_pred ccccEEEEEEecCC--CCCCCceeEEEeecCCC------cc-----------------cCccccCCceeeecccc-----
Q 000982 856 KLSQISVRIYSKDD--AGEPIPSVLLSLSGDDG------YR-----------------NNSVSWAGGSFHFDNLF----- 905 (1201)
Q Consensus 856 ~l~~i~v~v~~~~~--~~~pL~~vl~slsg~~~------~r-----------------~n~~T~~~G~~~f~~L~----- 905 (1201)
..|++.|+++|+++ .+.+|+||.|.|-..++ ++ ..++||++|.+.|.+|.
T Consensus 352 ~~G~v~i~KvD~dd~~~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~ 431 (488)
T 3uxf_A 352 KYGKVILTKTGTDDLADKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYV 431 (488)
T ss_dssp EEEEEEEEEEETTCCSCGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEE
T ss_pred EEeeEEEEEecCCcCCCCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeeccc
Confidence 35889999998753 57999999999855431 11 24789999999999999
Q ss_pred ----------Cccccchhh--hhhcccCCCceeEecCCCcc
Q 000982 906 ----------PGNFYLRPL--LKEYAFSPPAQAIELGSGES 934 (1201)
Q Consensus 906 ----------PG~Y~~~~~--~key~~~p~~~~i~v~~G~~ 934 (1201)
+|+|+|+++ ..+|.+.+.++.|+|.+++.
T Consensus 432 ~~~~~~~~~~~~~Y~l~EtkAP~GY~l~~~pi~f~v~~~~~ 472 (488)
T 3uxf_A 432 NGAKKDQLTDEDYYCLVETKAPEGYNLQADPLPFRVLAEKA 472 (488)
T ss_dssp TTEECCSCCTTSEEEEEEEECCTTBCCCSSCEEECCCHHHH
T ss_pred ccccccccCCCCcEEEEEeeCCCCcccCCCcEEEEEecCcc
Confidence 789999987 57999999999999998876
No 35
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=96.53 E-value=0.0027 Score=75.36 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=51.7
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeeeeecCcceeeeccCCCcEEEEeeeeEEEe
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~~~~~~~~V~v 205 (1201)
..|+|+|.+. ++.|++||+|.+.+. ...++||.+|.|.+ .|+||+|+|.+++.||.... ..|.+
T Consensus 321 ~~i~G~V~D~--------~g~pi~gA~V~v~~~----~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~---~~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQ--------NYNNLANAVISVSGI----NHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPET---VTVTV 384 (439)
T ss_dssp CSEEEEEECT--------TSCBCTTCEEEETTE----EEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEE---EEEEE
T ss_pred cceEEEEEcC--------CCCCccceEEEEEcc----cceeEECCCCeEEE-ccCCeeEEEEEEecCceeEE---EEEEE
Confidence 4689999874 479999999999643 24689999999987 59999999999999998652 34555
No 36
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=96.47 E-value=0.0052 Score=68.22 Aligned_cols=82 Identities=23% Similarity=0.447 Sum_probs=59.4
Q ss_pred eEEeeeeeeccceeEEeeeeeeeEEeeC-------CCcceeeEEEEEcCccc-ccccCCceeeeeeeecce--eEEeeee
Q 000982 308 MSVRHQHVTVPEKFQVTGFSVGGRVVDE-------NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNR--YTIEAVK 377 (1201)
Q Consensus 308 vtV~~~~~~l~~~f~~~g~sv~G~V~d~-------~G~pl~Ga~V~l~G~~~-~~TDadG~y~~~~L~pG~--Y~I~~~~ 377 (1201)
..+..+.+++.......+++|+|.|... ....-+|++|++.|... ++||++|+|++.++++|+ |+|..++
T Consensus 140 ~~~~nG~V~V~~~~~~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~ 219 (321)
T 3kcp_A 140 TDLINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISR 219 (321)
T ss_dssp CEEECEEEEECCCCCCSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEEC
T ss_pred eEEECCEEEECCCCCCCCceEEEEEccccccccccchhccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEee
Confidence 3344444444322333468899998753 24467899999977766 699999999999999998 9999999
Q ss_pred eeeeeccceeeE
Q 000982 378 VHYKFNKLKEYM 389 (1201)
Q Consensus 378 ~~y~~~~~~~v~ 389 (1201)
++|.-.....+.
T Consensus 220 ~g~l~~~i~~~~ 231 (321)
T 3kcp_A 220 ATYLDRVIANVV 231 (321)
T ss_dssp TEECCEEEEEEE
T ss_pred cCceeeeeeeeE
Confidence 998766554333
No 37
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=96.43 E-value=0.0042 Score=69.49 Aligned_cols=64 Identities=9% Similarity=0.168 Sum_probs=49.1
Q ss_pred ccccceeEEEEEecccc------------cc-----cccccCCCceEEEEee-----------------ecceEEE-EEc
Q 000982 48 RLDYSHVTVELRTLDGL------------VK-----ESTQCAPNGYYFIPVY-----------------DKGSFVI-KVN 92 (1201)
Q Consensus 48 ~i~lsgv~V~L~~~~G~------------~~-----~~t~t~~nG~y~i~~l-----------------~~G~Y~l-~~~ 92 (1201)
...|+||+|+|++.+|. .+ ..-+|+.+|.+.|..| ++|+|+| |.+
T Consensus 175 ~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~~~~~~~~~~~~~Y~l~Etk 254 (290)
T 3qdh_A 175 KAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGANRDNQKDATARCYVLVETK 254 (290)
T ss_dssp --CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCTTSSCCTTCSEEEEEEEEEE
T ss_pred CcccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccccccccccCCCceEEEEEcc
Confidence 35799999999987663 11 2336788999999988 5799999 899
Q ss_pred CCCCCCcCCC---ceeEEEcCC
Q 000982 93 GPEGWSWNPD---KVAVTVDDT 111 (1201)
Q Consensus 93 ~P~G~~~~p~---~~~v~Vd~~ 111 (1201)
+|.||.+... ..++.|..+
T Consensus 255 AP~GY~l~~~~~~~~~~~v~~~ 276 (290)
T 3qdh_A 255 APAGYVLPAGDGAVTPVKIEVG 276 (290)
T ss_dssp CCTTBCCCCGGGGEEEEEEEC-
T ss_pred CCCCeEcCcCcCCceeEEEECC
Confidence 9999999887 566766654
No 38
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=96.38 E-value=0.0049 Score=72.86 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=52.9
Q ss_pred cccccceeEEEEEecccccc-------------cccccCCCceEEEEee--------------------ecceEEE-EEc
Q 000982 47 ARLDYSHVTVELRTLDGLVK-------------ESTQCAPNGYYFIPVY--------------------DKGSFVI-KVN 92 (1201)
Q Consensus 47 ~~i~lsgv~V~L~~~~G~~~-------------~~t~t~~nG~y~i~~l--------------------~~G~Y~l-~~~ 92 (1201)
....|+||+|+|+..++... ..-+|+.+|.+.|..| .+|+|+| |.+
T Consensus 319 ~~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~~~~~~g~Y~lvETk 398 (436)
T 3hr6_A 319 TPGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETA 398 (436)
T ss_dssp CCCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTTTSCSEEEEEEEE
T ss_pred CCcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCccccccccccccccccccccCCCCeEEEEEec
Confidence 34679999999998775321 2336788999999988 4799999 899
Q ss_pred CCCCCCcCCCceeEEEcCC
Q 000982 93 GPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 93 ~P~G~~~~p~~~~v~Vd~~ 111 (1201)
+|.||.+.++.+.++|..+
T Consensus 399 AP~GY~l~~~pi~fti~~~ 417 (436)
T 3hr6_A 399 TASGYELLPKPVIVKLEAN 417 (436)
T ss_dssp CCTTCBCCSSCEEECCCCC
T ss_pred CCCCcCcCCCcEEEEEecC
Confidence 9999999999999888775
No 39
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=96.21 E-value=0.0034 Score=74.33 Aligned_cols=88 Identities=16% Similarity=0.187 Sum_probs=67.9
Q ss_pred ccccccccEEEEEEecCCCCCCCceeEEEeecCCCcccCccccCCceeeeccccCccccchhhhhhc-ccCCCceeEecC
Q 000982 852 FSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEY-AFSPPAQAIELG 930 (1201)
Q Consensus 852 f~~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~key-~~~p~~~~i~v~ 930 (1201)
|-.+...+|..+|.|++ |+||+||.+.|.|.. ....+||++|.|.+ .|.||+|.|.....+| . +..+.|+|.
T Consensus 331 ~~~~~~~gv~G~V~D~~--G~pi~gA~V~v~g~~--~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~--~~~~~v~v~ 403 (435)
T 3mn8_A 331 LLRQAHIGIKGLVTDAS--GFPIADANVYVAGLE--EKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQT--SAPQQVRVT 403 (435)
T ss_dssp HHHGGGSSEEEEEECSS--SCBCTTCEEEETTCT--TSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCC--CCCEEEEEC
T ss_pred ccccccceeEEEEECCC--CCccCceEEEEeccc--ccceEeCCCCeEEE-ecCCCcEEEEEEEccccc--ceEEEEEEe
Confidence 33455677999999874 999999999998831 14578999999977 5999999999999999 5 456778888
Q ss_pred CCcc--eeEEEEEEEEEE
Q 000982 931 SGES--REVIFQATRVAY 946 (1201)
Q Consensus 931 ~G~~--~~v~~~~~r~~~ 946 (1201)
.++. ..+.|+..+..-
T Consensus 404 ~~~~~~~~~~~~L~~~~~ 421 (435)
T 3mn8_A 404 NDNQEALRLDFKLAPVET 421 (435)
T ss_dssp CCSSSCEECCEECCBC--
T ss_pred cCCcceeEEEEEEeecCC
Confidence 8773 477777766544
No 40
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=96.08 E-value=0.0077 Score=72.08 Aligned_cols=65 Identities=14% Similarity=0.261 Sum_probs=52.9
Q ss_pred cccccceeEEEEEeccccc-----c-----------------cccccCCCceEEEEeee---------------cceEEE
Q 000982 47 ARLDYSHVTVELRTLDGLV-----K-----------------ESTQCAPNGYYFIPVYD---------------KGSFVI 89 (1201)
Q Consensus 47 ~~i~lsgv~V~L~~~~G~~-----~-----------------~~t~t~~nG~y~i~~l~---------------~G~Y~l 89 (1201)
....|+||+|+|+..+|.. + ..-+|+.+|.+.|..|. +|+|+|
T Consensus 368 ~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~~~~~~~~~~~~~~Y~l 447 (488)
T 3uxf_A 368 DKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCL 447 (488)
T ss_dssp CGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEETTEECCSCCTTSEEEE
T ss_pred CCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeecccccccccccCCCCcEEE
Confidence 4567999999999877542 1 12367789999999998 679999
Q ss_pred -EEcCCCCCCcCCCceeEEEcCC
Q 000982 90 -KVNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 90 -~~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
|.++|.||.+.+..+.++|..+
T Consensus 448 ~EtkAP~GY~l~~~pi~f~v~~~ 470 (488)
T 3uxf_A 448 VETKAPEGYNLQADPLPFRVLAE 470 (488)
T ss_dssp EEEECCTTBCCCSSCEEECCCHH
T ss_pred EEeeCCCCcccCCCcEEEEEecC
Confidence 8999999999999888887654
No 41
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=96.05 E-value=0.0039 Score=73.77 Aligned_cols=89 Identities=11% Similarity=0.223 Sum_probs=68.0
Q ss_pred cccccccccEEEEEEecCCCCCCCceeEEEeecCCCcccCccccCCceeeeccccCccccchhhhhhcccCCCceeEecC
Q 000982 851 SFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELG 930 (1201)
Q Consensus 851 ~f~~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~ 930 (1201)
.|-.+-.+.|..+|.|++ |+||+||.+.+.|.... ...+||.+|.|.+ .|.||.|.+.....+|. +..+.|.|.
T Consensus 289 ~~l~qv~~~I~G~V~D~~--g~pi~gA~V~v~g~~~~-~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--~~~~~v~v~ 362 (426)
T 1uwy_A 289 EYIKQVHLGVKGQVFDQN--GNPLPNVIVEVQDRKHI-CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--PHITKVIIP 362 (426)
T ss_dssp HHHGGGGCSEEEEEECTT--SCBCCSCEEEETTCCCS-SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC--CEEEEEEEC
T ss_pred hhhccccceeEEEEECCC--CCccCceEEEEEecccc-ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc--cEEEEEEEe
Confidence 454556788999999864 89999999999987421 1278999999998 69999999998888887 555568888
Q ss_pred CCc----ceeEEEEEEEEE
Q 000982 931 SGE----SREVIFQATRVA 945 (1201)
Q Consensus 931 ~G~----~~~v~~~~~r~~ 945 (1201)
+++ +..+.|+.....
T Consensus 363 ~~~~~~~~~~~~~~L~~~~ 381 (426)
T 1uwy_A 363 EKSQNFSALKKDILLPFQG 381 (426)
T ss_dssp SSCSSSSCEECCEECSSCC
T ss_pred CCCccccceEEEEEEecCC
Confidence 776 555655555443
No 42
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=95.99 E-value=0.0016 Score=65.11 Aligned_cols=55 Identities=16% Similarity=0.403 Sum_probs=42.8
Q ss_pred CcccCccccCCceeeeccccCccccchhhh-----hhcccCCCc----eeEecCCCcceeEEEE
Q 000982 886 GYRNNSVSWAGGSFHFDNLFPGNFYLRPLL-----KEYAFSPPA----QAIELGSGESREVIFQ 940 (1201)
Q Consensus 886 ~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~-----key~~~p~~----~~i~v~~G~~~~v~~~ 940 (1201)
.|+.-.++|++|.|.|.+|+||+|||...+ .++...|.. +.|+|+.||+.+|.++
T Consensus 86 ~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk~V~v~ggq~~~v~l~ 149 (150)
T 3qec_A 86 TYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLT 149 (150)
T ss_dssp GGCEEEECCTTSEEEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEEEEEESSSCCCCEEEC
T ss_pred cceeEEEeCCCCcEEECCCCCccEEEEEEEEeccCCCCCcccccceEEEEEEEcCCcEEEEEec
Confidence 365666999999999999999999988643 355544433 4589999999999875
No 43
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=95.98 E-value=0.28 Score=67.62 Aligned_cols=88 Identities=15% Similarity=0.063 Sum_probs=49.4
Q ss_pred eeEEEeccCCCeeee-eeecCccceee------eeecCcceeeeccCCCcE-------EEE----eeeeEEEeeccCcee
Q 000982 151 VNVELLSHSGDLISS-VITSSEGSYLF------KNIIPGKYKLRASHPNLS-------VEV----RGSTEVELGFENGEV 212 (1201)
Q Consensus 151 v~V~L~~~~g~~i~s-ttTd~~G~f~F------~~l~PG~Y~l~~~~~g~~-------~~~----~~~~~V~v~~~~~~v 212 (1201)
++|+|.+.+|..+.. ..+...|.|.| .+.+.|.|+|.+...++. +.+ .+..+|++....
T Consensus 159 v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~s~~F~VeEYvlP~feV~i~~~~--- 235 (1676)
T 3cu7_A 159 TVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEY--- 235 (1676)
T ss_dssp EEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSSSCCCEEEEEEEECEECCCSSEECCEESC---
T ss_pred eEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecCCCCceEEEEEEEccccCceEEEEEEccC---
Confidence 788899999955443 23337888874 344679999998764421 111 122333333211
Q ss_pred eeeEeecC-cccceEEEe---ecCce-EE-EEEEEE
Q 000982 213 DDIFFAPG-YEIRGLVVA---QGNPI-LG-VHIYLY 242 (1201)
Q Consensus 213 ~~~l~i~G-~~vsG~V~~---~g~Pl-~G-a~V~L~ 242 (1201)
..+.+.+ -.+..+|.. -|.|+ .| +.|.+.
T Consensus 236 -~~~~~~d~~~~~v~v~A~Y~yG~PV~~G~a~v~~~ 270 (1676)
T 3cu7_A 236 -NFIGYKNFKNFEITIKARYFYNKVVTEADVYITFG 270 (1676)
T ss_dssp -SEECSTTSSCCEEEECEEETTTEECSEEEEEEEEE
T ss_pred -cEEEecCCCEEEEEEEEEEcCCceeecCeEEEEEE
Confidence 1122222 345555554 39999 88 666544
No 44
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=95.93 E-value=1.8 Score=48.80 Aligned_cols=277 Identities=15% Similarity=0.117 Sum_probs=124.8
Q ss_pred EeeeCCCcceeccccccCcccee--eecCCccceeee------c---CCcccccc--cccEEEEEEecCCCCCCCceeEE
Q 000982 813 ETSTGADGSFIGGPLYDDITYNV--EASKPGYYLRQV------G---PNSFSCQK--LSQISVRIYSKDDAGEPIPSVLL 879 (1201)
Q Consensus 813 ~~~Td~~G~f~~~~L~~~~~y~i--~a~k~gy~~~~~------~---~~~f~~~~--l~~i~v~v~~~~~~~~pL~~vl~ 879 (1201)
..+....-+|.+..|.++..|.+ .|...+-.-.+. . +-.+.... -..|.|.-... .+.++.+-.+
T Consensus 52 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~~~~~~si~l~W~~~--~~~~i~~Y~v 129 (375)
T 3t1w_A 52 EVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPL--NSSTIIGYRI 129 (375)
T ss_dssp EEEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCCCCSCCEEECCCSSEEEEECCCC--CCTTEEEEEE
T ss_pred EEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEEecCCCeEEEEEECC--CCCCceEEEE
Confidence 34555677899999998766654 443322111110 0 12232222 23333433322 1345666666
Q ss_pred EeecCCCc---ccCccccCCceeeeccccCcccc-ch--hhhhhcccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEE
Q 000982 880 SLSGDDGY---RNNSVSWAGGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTIT 953 (1201)
Q Consensus 880 slsg~~~~---r~n~~T~~~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~ 953 (1201)
.....+.- .........-.+.+.+|.||.-| ++ +....-.-.|+...+.........+.+.... ..++.=+=.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~~~~~-~~si~l~W~ 208 (375)
T 3t1w_A 130 TVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIG-PDTMRVTWA 208 (375)
T ss_dssp EEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCC-SSCEEEEEE
T ss_pred EEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEEEecc-cCEEEEEEc
Confidence 65543221 11233445678999999999744 44 3322111112221111111222222221100 000000001
Q ss_pred eecCCCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCcccc
Q 000982 954 LLSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKG 1031 (1201)
Q Consensus 954 ~~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~ 1031 (1201)
...+.++.+-.|+....+ ............-.|.|.||.||..|.+++.+....| .+.|....+.....-..+
T Consensus 209 ~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g-----~s~~~~~~~~t~p~~P~~ 283 (375)
T 3t1w_A 209 PPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQH-----ESTPLRGRQKTGLDSPTG 283 (375)
T ss_dssp CCSSCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEE
T ss_pred CCCCCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCC-----cCCceeeEEecCCCCCCc
Confidence 122445666677665433 2233334444558899999999999999999754322 112222222211111222
Q ss_pred ceEEEeeccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEeeccccceeecCCCCc-ceeeEecc
Q 000982 1032 LDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1032 ~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~~~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
+.+..+. ...|...=... ........|..+..+..........-.....|.+..|.++ .|.+++..
T Consensus 284 l~~~~~~---~~sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 284 IDFSDIT---ANSFTVHWIAP--RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp EEEESCC---SSCEEEEEECC--SSCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred cEeeecc---CCEEEEEECCC--CcceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEE
Confidence 2221111 11111111111 1112344555544332122222111233567899999998 78888774
No 45
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=95.66 E-value=0.009 Score=65.05 Aligned_cols=49 Identities=24% Similarity=0.418 Sum_probs=41.9
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 103 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~p 170 (254)
T 2boy_A 103 LIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEIP 170 (254)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccCC
Confidence 4689999999999999999999 3422 24899999999999999999873
No 46
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=95.30 E-value=0.017 Score=64.58 Aligned_cols=49 Identities=27% Similarity=0.327 Sum_probs=41.8
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 137 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip 204 (312)
T 2xsu_A 137 LIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCP 204 (312)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCC
Confidence 4689999999999999999999 3321 24899999999999999999864
No 47
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=95.20 E-value=0.018 Score=62.17 Aligned_cols=49 Identities=29% Similarity=0.445 Sum_probs=41.7
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc-------------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE-------------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~-------------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+.
T Consensus 79 i~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~~ 151 (241)
T 2bum_B 79 VIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWR 151 (241)
T ss_dssp EEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEES
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccccC
Confidence 4689999999999999999999 3321 13899999999999999999884
No 48
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=95.16 E-value=0.017 Score=62.99 Aligned_cols=49 Identities=27% Similarity=0.417 Sum_probs=41.6
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||-|.+-
T Consensus 100 l~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypip 167 (260)
T 3th1_A 100 LIIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQIP 167 (260)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCCC
Confidence 4589999999999999999999 3421 14899999999999999999764
No 49
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=95.16 E-value=5.3 Score=44.69 Aligned_cols=292 Identities=16% Similarity=0.155 Sum_probs=128.0
Q ss_pred eeeCCCcceeccccccCcccee--eecCCccceeee---------cCCcc--cccccccEEEEEEecCCCCCCCceeEEE
Q 000982 814 TSTGADGSFIGGPLYDDITYNV--EASKPGYYLRQV---------GPNSF--SCQKLSQISVRIYSKDDAGEPIPSVLLS 880 (1201)
Q Consensus 814 ~~Td~~G~f~~~~L~~~~~y~i--~a~k~gy~~~~~---------~~~~f--~~~~l~~i~v~v~~~~~~~~pL~~vl~s 880 (1201)
......-+|.+..|.++..|.+ .|...+-.-.+. .+..+ .+..-..|.|+-.... +.++.+-.+.
T Consensus 52 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~ 129 (368)
T 1fnf_A 52 VVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVR 129 (368)
T ss_dssp EECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCCCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEE
T ss_pred EecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCCcCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEE
Confidence 3445566789999998766654 443221111110 01122 2333345555544332 3456666666
Q ss_pred eecCCC---cccCccccCCceeeeccccCcccc-ch--hhhhhcccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEEe
Q 000982 881 LSGDDG---YRNNSVSWAGGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITL 954 (1201)
Q Consensus 881 lsg~~~---~r~n~~T~~~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~~ 954 (1201)
....++ .+.-.+....-.+.+.+|.||..| ++ +....-.-.|...........-..+.+.... ..++.=+=..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~~~~~-~~sv~l~W~~ 208 (368)
T 1fnf_A 130 YSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDIT-ANSFTVHWIA 208 (368)
T ss_dssp EEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCC-SSEEEEEEEC
T ss_pred EEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEEEEcc-CCEEEEEEeC
Confidence 543321 111112345568999999999855 43 3322111111111111111111222221100 0000000001
Q ss_pred ecCCCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEec-cCcccc
Q 000982 955 LSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVG-SGDIKG 1031 (1201)
Q Consensus 955 ~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~-~~d~~~ 1031 (1201)
.. .++.|-.|+....+ ............-.|.|.||.||+.|.|++.+....|.. |........ ..--.+
T Consensus 209 p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~------~~~~~~~~t~p~~P~~ 281 (368)
T 1fnf_A 209 PR-ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREES------PLLIGQQSTVSDVPRD 281 (368)
T ss_dssp CS-SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEEC------CCEEEEEECCCCSCEE
T ss_pred CC-CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccC------CcccccccCCCCCCCe
Confidence 11 24556666655332 223333444456789999999999999999975432211 111111111 111112
Q ss_pred ceEEEeeccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEee-ccccceeecCCCCc-ceeeEeccCCCCccc
Q 000982 1032 LDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL-PMSNFFQVKDLPKG-KHLLQLRSSLPSSTH 1109 (1201)
Q Consensus 1032 ~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~-~~~~~f~~~~l~~~-~y~v~~~s~l~~~~~ 1109 (1201)
+....... .. |...=.... .......|..+..+....... ..+ .....|.+..|.++ .|.+++...-....-
T Consensus 282 l~~~~~~~-~s--v~l~W~~p~--~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g 355 (368)
T 1fnf_A 282 LEVVAATP-TS--LLISWDAPA--VTVRYYRITYGETGGNSPVQE-FTVPGSKSTATISGLKPGVDYTITVYAVTGRGDS 355 (368)
T ss_dssp EEEEEEET-TE--EEEEEECCS--SCCSEEEEEEEETTCCSCCEE-EEEETTCCEEEECSCCTTCCEEEEEEEECCCSSS
T ss_pred eEEEecCC-CE--EEEEeeCCC--CccceEEEEEEECCCCCccEE-EEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcC
Confidence 22222111 11 111111111 112344555554333222222 233 23467899999998 688777653222222
Q ss_pred ccccceEEEecc
Q 000982 1110 RFESEIIEVDLE 1121 (1201)
Q Consensus 1110 ~~~~~~~~v~~~ 1121 (1201)
.+.+..+.+.|+
T Consensus 356 ~~s~~~~~i~~~ 367 (368)
T 1fnf_A 356 PASSKPISINYR 367 (368)
T ss_dssp CCBCCCEEEEEC
T ss_pred cccCceeeeeee
Confidence 344455555553
No 50
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=95.10 E-value=0.016 Score=64.80 Aligned_cols=49 Identities=27% Similarity=0.495 Sum_probs=41.9
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 133 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~p 200 (311)
T 2azq_A 133 MFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCD 200 (311)
T ss_dssp EEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEECC
T ss_pred EEEEEEEEcCCCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCCC
Confidence 4689999999999999999999 3322 14899999999999999999864
No 51
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=95.02 E-value=1 Score=48.96 Aligned_cols=108 Identities=18% Similarity=0.217 Sum_probs=55.7
Q ss_pred CceeeeccccCcccc-ch--hhhhhcccCCCceeEecCCC--cceeEEEEEEEEEEeeeeeEEeecCCCCCceeEEEeec
Q 000982 896 GGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAIELGSG--ESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSE 970 (1201)
Q Consensus 896 ~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i~v~~G--~~~~v~~~~~r~~~s~~G~V~~~~g~p~~gv~v~~~~~ 970 (1201)
.-.+.+.+|.||..| ++ +.-..-.-.+....+...++ .-..+.+... ...++.=+=... ..++.+-.|+....
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~-~~~sv~l~W~~p-~~~~~~Y~v~~~~~ 150 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDA-TETTITISWRTK-TETITGFQVDAVPA 150 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEE-CSSCEEEEEECC-SCCCCEEEEEEEES
T ss_pred ccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEc-CCCeEEEEEeCC-CCcccEEEEEEEEC
Confidence 457889999999755 44 33222222233333333222 2233333311 001111000111 23566777776644
Q ss_pred ccc-eeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 971 SKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 971 ~~~-~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
+.. ..........-.|.|.||.||+.|.|++.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 186 (290)
T 3r8q_A 151 NGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 186 (290)
T ss_dssp SSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 322 22333444566899999999999999999753
No 52
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=94.91 E-value=0.0072 Score=61.50 Aligned_cols=54 Identities=17% Similarity=0.409 Sum_probs=39.6
Q ss_pred cccCccccCCceeeeccccCccccchhhh---hh--cccCCC----ceeEecCCCcceeEEEE
Q 000982 887 YRNNSVSWAGGSFHFDNLFPGNFYLRPLL---KE--YAFSPP----AQAIELGSGESREVIFQ 940 (1201)
Q Consensus 887 ~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~---ke--y~~~p~----~~~i~v~~G~~~~v~~~ 940 (1201)
|+.-.++|++|.|.|.+|+||+|||...+ .+ |...+. .+.|+|+.||+.+|+++
T Consensus 107 y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~k~Vtv~~Ge~~~v~L~ 169 (170)
T 1xpn_A 107 YVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLT 169 (170)
T ss_dssp HCEEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEEEC
T ss_pred ceeEEEecCCCcEEecCCCCccEEEEEEEeccCccccccccccceEEEEEEeCCCcEEEEEec
Confidence 55667899999999999999999998742 22 211111 24478999999888764
No 53
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=94.79 E-value=0.022 Score=63.10 Aligned_cols=49 Identities=31% Similarity=0.413 Sum_probs=42.2
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc-------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE-------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~-------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 134 l~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p 200 (293)
T 1tmx_A 134 CWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPIP 200 (293)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccCC
Confidence 4689999999999999999999 3431 24899999999999999999875
No 54
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=94.72 E-value=0.17 Score=69.83 Aligned_cols=213 Identities=14% Similarity=0.162 Sum_probs=106.7
Q ss_pred eeEEEeccCCCeeee--ee-ecCccceeee-----eecCcceeeeccCCCcEEEEeeeeEEEeecc---Cce--ee--ee
Q 000982 151 VNVELLSHSGDLISS--VI-TSSEGSYLFK-----NIIPGKYKLRASHPNLSVEVRGSTEVELGFE---NGE--VD--DI 215 (1201)
Q Consensus 151 v~V~L~~~~g~~i~s--tt-Td~~G~f~F~-----~l~PG~Y~l~~~~~g~~~~~~~~~~V~v~~~---~~~--v~--~~ 215 (1201)
++|+|.+.+|..+.. .. ||..|.|.++ +.+.|.|+|.+...+..-. ..+..|.|..= ... +. ..
T Consensus 162 v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~-~~~~~F~VeEYvlP~feV~i~~~~~ 240 (1661)
T 2b39_A 162 VFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQ-VFSAEFEVKEYVLPSFEVQLEPEEK 240 (1661)
T ss_dssp EEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEE-EEEEEEEECCCCCCSBCCEEECSSS
T ss_pred EEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEeecCCCc-eEEEEEEEEEccCCcEEEEEEcCcc
Confidence 688899999866543 23 5688987663 3356999999864331100 01123333210 000 00 01
Q ss_pred EeecC--cccceEEEe---ecCceEEEEE-EEEeCCcceeecCCCCCCCccccccceeeeecCCcceeec--eec-----
Q 000982 216 FFAPG--YEIRGLVVA---QGNPILGVHI-YLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK--SVP----- 282 (1201)
Q Consensus 216 l~i~G--~~vsG~V~~---~g~Pl~Ga~V-~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~--~Lp----- 282 (1201)
....+ -.+..+|.. .|.|++|... .+......... ..+ ........+|.+|.|.|. .++
T Consensus 241 ~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~~~~~~~~~~~------~~~--~~~~~~~~~dg~G~~~l~~~~~~~~~~~ 312 (1661)
T 2b39_A 241 FYYIDDPDGLKVNIIARFLYGEQVDGTAFVIFGVQDGDRRI------SLT--HSLTRVPINDGNGEAILKRQVLLNGVQP 312 (1661)
T ss_dssp SCCSSCSSCCCEEEECBBSSSCBCCEEEEEEEEEECSSCEE------CCG--GGCEEEEESSSCEEECCCTTTTSSSCTT
T ss_pred eEecCCCcEEEEEEEEEEcCCCceeeEEEEEEEEecCCccc------ccC--cceeeeEecCCeEEEEEehHHhhccccc
Confidence 11123 445566664 3999998632 22111100000 000 001134568999999884 111
Q ss_pred -------ccceeeeeec-c--ccce------EEeeCCCceeeEEeeeeeeccceeEEeeee--eeeEEeeCCCcceeeEE
Q 000982 283 -------CGQYELVPHY-K--GENT------VFDVSPSLVSMSVRHQHVTVPEKFQVTGFS--VGGRVVDENDMGVEGVK 344 (1201)
Q Consensus 283 -------pG~Y~v~~~~-~--~~~~------~~~~~P~~~~vtV~~~~~~l~~~f~~~g~s--v~G~V~d~~G~pl~Ga~ 344 (1201)
.-.+.|.+.. . +... .+.+.+....+.+... + .+-..|.. +.-.+++.+|+|+++..
T Consensus 313 ~~~~~~~~~~~~v~a~V~e~~gg~~~~~~~~~i~i~~~~~~i~~~~~----~-~~~~~g~~~~~~v~~~~~dG~p~~~~~ 387 (1661)
T 2b39_A 313 SRADALVGKSIYVSATVILQSGSDMVEAERTGIPIVTSPYQIHFTKT----P-KFFKPAMPFDLMVYVTNPDGSPARHIP 387 (1661)
T ss_dssp CHHHHSSSCBCEEEEEEEETTTCCCCEECCCCCBCCSCSSBCCBSSC----C-SEECSSEEEECCBBCBBTTTBCCSSCC
T ss_pred CChhhccCcEEEEEEEEEEcCCceEEEeeeEEEEEEEeeEEEEEEeC----C-CccCCCCcEEEEEEEEcCCCCCcCCce
Confidence 1245555422 1 1111 1123333332322111 1 12223333 33345778999999999
Q ss_pred EEE-cCcccccccCCce--eeeeeee--cceeEEeeeee
Q 000982 345 ILV-DGHERSITDRDGY--YKLDQVT--SNRYTIEAVKV 378 (1201)
Q Consensus 345 V~l-~G~~~~~TDadG~--y~~~~L~--pG~Y~I~~~~~ 378 (1201)
|.+ .+....+||++|. |.| +++ .|.|.|++...
T Consensus 388 v~v~~~~~~~~t~~~G~~~~~i-~~~~~~g~y~l~v~~~ 425 (1661)
T 2b39_A 388 VVTQGSNVQSLTQDDGVAKLSI-NTQNKRDPLTITVRTK 425 (1661)
T ss_dssp EEETTCCCCCCCSSSCBCCCEE-EECSCCSCEEEEEEEC
T ss_pred EEEeccceEEEECCCCeEEEEE-ECCCCCcEEEEEEEEc
Confidence 988 4554568999995 555 344 37899988653
No 55
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=94.72 E-value=0.023 Score=63.45 Aligned_cols=49 Identities=20% Similarity=0.420 Sum_probs=41.5
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc----------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE----------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~----------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 134 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 203 (311)
T 1dmh_A 134 LILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCP 203 (311)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccCC
Confidence 4579999999999999999998 3321 14799999999999999999863
No 56
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=94.52 E-value=0.053 Score=64.83 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=48.9
Q ss_pred EEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeeeeecCcceeeeccCCCcEEEEeeeeEEEee
Q 000982 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELG 206 (1201)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~~~~~~~~V~v~ 206 (1201)
+|+|+|. | .+.+.+.|.+.+..+ .-..+.||++|.|++++|+||+|+|.+..+|+... ...|+|.
T Consensus 259 tVsG~V~---G--------~~~~~~avv~~~~k~-~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~---~~~VtV~ 323 (508)
T 1nkg_A 259 KVAGTAS---G--------ADSSMDWVVHWYNDA-AQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVA---TSSVTVS 323 (508)
T ss_dssp EEEEEEE---S--------SCTTSCEEEEEECSS-CEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEE---EEEEEEC
T ss_pred EEEEEEc---C--------ccCCceEEEEEcCCC-ceeEEEECCCCcEEeCCcCCceEEEEEEECceEEE---EeEEEEc
Confidence 6788875 2 333333344433333 24678899999999999999999999999999544 3567777
Q ss_pred ccCc
Q 000982 207 FENG 210 (1201)
Q Consensus 207 ~~~~ 210 (1201)
++..
T Consensus 324 aG~t 327 (508)
T 1nkg_A 324 AGST 327 (508)
T ss_dssp TTCE
T ss_pred CCCe
Confidence 6654
No 57
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=94.50 E-value=0.035 Score=59.78 Aligned_cols=48 Identities=31% Similarity=0.511 Sum_probs=41.0
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc-------------------cccccCCceeeeeeeecceeEE
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE-------------------RSITDRDGYYKLDQVTSNRYTI 373 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~-------------------~~~TDadG~y~~~~L~pG~Y~I 373 (1201)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||-|.+
T Consensus 78 i~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 4579999999999999999998 2311 1389999999999999999988
No 58
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=94.45 E-value=0.033 Score=61.72 Aligned_cols=49 Identities=31% Similarity=0.401 Sum_probs=41.6
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||-|.+-
T Consensus 130 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p 197 (290)
T 3n9t_A 130 ALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPIP 197 (290)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCCC
Confidence 4578999999999999999998 3321 13899999999999999999874
No 59
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=94.45 E-value=0.032 Score=61.40 Aligned_cols=49 Identities=29% Similarity=0.561 Sum_probs=41.6
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 132 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p 199 (280)
T 3hhy_A 132 LVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIP 199 (280)
T ss_dssp EEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCCC
Confidence 4578999999999999999998 3321 13899999999999999999864
No 60
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=94.35 E-value=0.031 Score=58.78 Aligned_cols=49 Identities=27% Similarity=0.268 Sum_probs=41.5
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc--------------cccccCC-ceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRD-GYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~--------------~~~TDad-G~y~~~~L~pG~Y~I~ 374 (1201)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++ |+|.|.-+.||.|.+.
T Consensus 49 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 49 ILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 4589999999999999999998 3321 1379999 9999999999999875
No 61
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=94.27 E-value=0.061 Score=60.13 Aligned_cols=54 Identities=22% Similarity=0.391 Sum_probs=43.5
Q ss_pred EEeeeEeeeecCccccccCCCCcceeEEEeccC--CC------------eeeeeeecCccceeeeeecCcceeeec
Q 000982 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSEGSYLFKNIIPGKYKLRA 188 (1201)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~------------~i~sttTd~~G~f~F~~l~PG~Y~l~~ 188 (1201)
.|.|+|++. ++.|++||.|+++..+ |. .-....||++|+|.|.-|.||.|.+-.
T Consensus 138 ~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip~ 205 (312)
T 2xsu_A 138 IIEGTVTDT--------EGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCPP 205 (312)
T ss_dssp EEEEEEEET--------TSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCT
T ss_pred EEEEEEECC--------CCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCCC
Confidence 478899874 3799999999999654 31 124688999999999999999999753
No 62
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=94.24 E-value=0.062 Score=63.07 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=40.3
Q ss_pred CcccccceeEEEEEecccccccc--cccCCCceEEEEeeecceEEE-EEcCCCCCCcCCCceeEEEcCC
Q 000982 46 DARLDYSHVTVELRTLDGLVKES--TQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (1201)
Q Consensus 46 d~~i~lsgv~V~L~~~~G~~~~~--t~t~~nG~y~i~~l~~G~Y~l-~~~~P~G~~~~p~~~~v~Vd~~ 111 (1201)
|.+-.|+||+++|++.+|+.+.. .+++..+.+ +. |++|+|+| +.++|+||.. .+.+.++|..+
T Consensus 36 d~~~~L~GA~f~L~~~~g~~v~e~~w~s~~~~~~-~~-L~~G~YtL~Et~AP~GY~~-a~~I~FtV~~~ 101 (457)
T 2xi9_A 36 DYSKLLEGATLQLTGDNVNSFQARVFSSNDIGER-IE-LSDGTYTLTELNSPAGYSI-AEPITFKVEAG 101 (457)
T ss_dssp BCSSCCCCCEEEEC---------CEEECCSSCEE-EE-CCSEEEEEEEEECCTTBCC-CCCEEEEEETT
T ss_pred CCCCccCCcEEEEEeCCCCeeeeeEEEeCCceeE-Ee-eCCceEEEEEecCCCCcee-ccCEEEEecCC
Confidence 34456899999999998887665 333445554 44 69999999 8999999997 46688887653
No 63
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=94.18 E-value=0.045 Score=59.59 Aligned_cols=51 Identities=24% Similarity=0.382 Sum_probs=41.7
Q ss_pred eeeeEEeecCCCCCceeEEEeecc--c------------ceeeeeeecCCCceEeecccCCceEEE
Q 000982 948 ATGTITLLSGQPKDGVSVEARSES--K------------GYYEETVTDTSGSYRLRGLHPDTTYVI 999 (1201)
Q Consensus 948 ~~G~V~~~~g~p~~gv~v~~~~~~--~------------~~~~~~~Td~~G~~~i~gL~pg~~y~v 999 (1201)
+.|+|.+.+|+|++|+.|++---+ + ..++-..||++|.|+++-+.||+ |-|
T Consensus 105 l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~-Y~~ 169 (254)
T 2boy_A 105 FRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAP-YEI 169 (254)
T ss_dssp EEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCC-EEC
T ss_pred EEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCcc-ccC
Confidence 479999999999999999985211 1 23678999999999999999997 543
No 64
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=94.18 E-value=0.045 Score=65.44 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=47.1
Q ss_pred eeeeeEEeeCCCcceee-EEEEEcCcc---cccccCCceeeeeeeecceeEEeeeeeeeeeccceeeEeecCC
Q 000982 326 FSVGGRVVDENDMGVEG-VKILVDGHE---RSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNM 394 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~G-a~V~l~G~~---~~~TDadG~y~~~~L~pG~Y~I~~~~~~y~~~~~~~v~v~p~~ 394 (1201)
.+|+|+|. |.|.+. +.|.++.+. -+.||++|.|++.+|+||+|+|.+.++++.+... .|.|.++.
T Consensus 258 GtVsG~V~---G~~~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~-~VtV~aG~ 326 (508)
T 1nkg_A 258 GKVAGTAS---GADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATS-SVTVSAGS 326 (508)
T ss_dssp BEEEEEEE---SSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEE-EEEECTTC
T ss_pred cEEEEEEc---CccCCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEe-EEEEcCCC
Confidence 57999988 554222 334333222 2689999999999999999999999998755443 57777664
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=94.13 E-value=0.031 Score=59.29 Aligned_cols=48 Identities=17% Similarity=0.311 Sum_probs=40.2
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCc-------------c------cccc-cCCceeeeeeeecceeEE
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGH-------------E------RSIT-DRDGYYKLDQVTSNRYTI 373 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~-------------~------~~~T-DadG~y~~~~L~pG~Y~I 373 (1201)
..|.|+|+|.+|+||+||.|.+ +|. . ...| |++|+|+|.-+.||.|..
T Consensus 53 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp~ 125 (209)
T 2bum_A 53 IRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPG 125 (209)
T ss_dssp EEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcccC
Confidence 4689999999999999999999 331 0 1366 999999999999999975
No 66
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=93.89 E-value=0.059 Score=58.74 Aligned_cols=52 Identities=31% Similarity=0.466 Sum_probs=42.9
Q ss_pred eeeeeEEeecCCCCCceeEEEe-ec-c------------cceeeeeeecCCCceEeecccCCceEEE
Q 000982 947 SATGTITLLSGQPKDGVSVEAR-SE-S------------KGYYEETVTDTSGSYRLRGLHPDTTYVI 999 (1201)
Q Consensus 947 s~~G~V~~~~g~p~~gv~v~~~-~~-~------------~~~~~~~~Td~~G~~~i~gL~pg~~y~v 999 (1201)
.+.|+|.+.+|+|++|+.|++- .. + ...++-..||++|+|+++-+.||+ |-|
T Consensus 101 ~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~-Ypi 166 (260)
T 3th1_A 101 IIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVP-YQI 166 (260)
T ss_dssp EEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCC-EEC
T ss_pred EEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCC-CCC
Confidence 3689999999999999999984 11 1 135789999999999999999997 443
No 67
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=93.86 E-value=1.8 Score=53.64 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=28.7
Q ss_pred eeEEEEEecccccccccc--cC-CCceEE--EEe---eecceEEEEEcC
Q 000982 53 HVTVELRTLDGLVKESTQ--CA-PNGYYF--IPV---YDKGSFVIKVNG 93 (1201)
Q Consensus 53 gv~V~L~~~~G~~~~~t~--t~-~nG~y~--i~~---l~~G~Y~l~~~~ 93 (1201)
-++|.|+|++|+.+.+.. ++ .+|.|. |++ ...|.|+|++..
T Consensus 140 ~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~ 188 (645)
T 2hr0_A 140 TVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYY 188 (645)
T ss_dssp EEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEE
Confidence 478999999998877642 33 577655 333 245999998864
No 68
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=93.81 E-value=0.049 Score=59.27 Aligned_cols=49 Identities=27% Similarity=0.434 Sum_probs=41.1
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-----cCcc---------------cccccCCceeeeeeeecceeEEe
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-----DGHE---------------RSITDRDGYYKLDQVTSNRYTIE 374 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-----~G~~---------------~~~TDadG~y~~~~L~pG~Y~I~ 374 (1201)
..+.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 104 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 172 (257)
T 3o5u_A 104 MRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIP 172 (257)
T ss_dssp EEEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcCCC
Confidence 4589999999999999999998 2311 13899999999999999999763
No 69
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=93.79 E-value=3.3 Score=44.60 Aligned_cols=192 Identities=13% Similarity=0.144 Sum_probs=89.5
Q ss_pred CceeeeccccCcccc-ch--hhhhhcccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEEeecCCCCCceeEEEeeccc
Q 000982 896 GGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSESK 972 (1201)
Q Consensus 896 ~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~~~~g~p~~gv~v~~~~~~~ 972 (1201)
.-.+.+.+|.||.-| ++ +....-.-.|....+....+.-..+.+.... ..++.=+=.... .++.+-.|+....+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~-~~sv~l~W~~p~-~~i~~Y~v~~~~~~~ 144 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRT-ATSLDLEWDNSE-AEAQEYKVVYSTLAG 144 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEC-SSCEEEEEECCS-SCCSEEEEEEEETTC
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEecC-CCeEEEEecCCC-CCccEEEEEEEeCCC
Confidence 456788899999844 44 3322212223333344444444444433211 001100001111 356666777664432
Q ss_pred c-eeeeeeecC---CCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCccccceEEEeeccceeEEEEE
Q 000982 973 G-YYEETVTDT---SGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGH 1048 (1201)
Q Consensus 973 ~-~~~~~~Td~---~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~~~f~~~~~~~~~~i~g~ 1048 (1201)
. ......... .-.|.|.||.||..|.|++.+....| .+.|......-......++....+.. .. |...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g-----~s~~~~~~~~t~~~~P~~l~~~~~~~-~s--v~l~ 216 (283)
T 1tdq_A 145 EQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSK-----QSIPATMNARTELDSPRDLMVTASSE-TS--ISLI 216 (283)
T ss_dssp CCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEEEEECS-SC--EEEE
T ss_pred CcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCC-----CCcceEEEecCCCCCCCccEEeEecC-CE--EEEE
Confidence 2 223333333 56899999999999999999753321 22233332221111222222222211 11 1111
Q ss_pred eeccchhccccceEEEEeccCCccceeEEEeec-cccceeecCCCCc-ceeeEecc
Q 000982 1049 VEGNRIKELNSHLLVEIKSASDTSKVESVISLP-MSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1049 V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~~-~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
=... ........|..+..+... .. ..++ ....|.+..|.++ .|.+++..
T Consensus 217 W~~p--~~~i~~Y~v~~~~~~~~~--~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 267 (283)
T 1tdq_A 217 WTKA--SGPIDHYRITFTPSSGIS--SE-VTVPRDRTSYTLTDLEPGAEYIISITA 267 (283)
T ss_dssp EECC--CSCCSEEEEEEECSSSCC--EE-EEEESSCSEEEECCCCTTCCEEEEEEE
T ss_pred EeCC--CCcccEEEEEEEcCCCCe--eE-EEeCCCccEEEECCCCCCCEEEEEEEE
Confidence 1111 111234556555432221 11 2233 3456889999888 68887764
No 70
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=93.74 E-value=0.086 Score=59.00 Aligned_cols=56 Identities=30% Similarity=0.507 Sum_probs=44.5
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--CC------------eeeeeeecCccceeeeeecCcceeeecc
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSEGSYLFKNIIPGKYKLRAS 189 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~------------~i~sttTd~~G~f~F~~l~PG~Y~l~~~ 189 (1201)
..|.|+|++. +|.|++||.|+++..+ |. .-....||++|+|.|.-+.||.|.+-..
T Consensus 133 l~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~p~d 202 (311)
T 2azq_A 133 MFLQGQVFDA--------NGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCDPQ 202 (311)
T ss_dssp EEEEEEEECS--------SSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEECCTT
T ss_pred EEEEEEEEcC--------CCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCCCCC
Confidence 3578999874 3699999999999665 31 1235789999999999999999997543
No 71
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=93.60 E-value=0.073 Score=57.51 Aligned_cols=69 Identities=20% Similarity=0.292 Sum_probs=49.8
Q ss_pred eeeeEEeecCCCCCceeEEEeecc--c-----------------ceeeeeeecCCCceEeecccCCceEEEEEEEecCCC
Q 000982 948 ATGTITLLSGQPKDGVSVEARSES--K-----------------GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 1008 (1201)
Q Consensus 948 ~~G~V~~~~g~p~~gv~v~~~~~~--~-----------------~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~ 1008 (1201)
+.|+|.+.+|+|++|+.|++---+ + ..++-..||++|.|+++-+.||+ |.+... +
T Consensus 81 v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~-Yp~~~~-----~ 154 (241)
T 2bum_B 81 VHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGP-YPWRNR-----I 154 (241)
T ss_dssp EEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC-EEESSS-----T
T ss_pred EEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCc-cccCCC-----C
Confidence 489999999999999999984111 1 12577899999999999999997 654210 0
Q ss_pred cccccccCCceEEEEecc
Q 000982 1009 STKIERASPESVTVKVGS 1026 (1201)
Q Consensus 1009 ~~~~~~~~P~~~~v~~~~ 1026 (1201)
+ -..|.|+.+.|..
T Consensus 155 ~----~~RpaHIH~~V~a 168 (241)
T 2bum_B 155 N----EWRPAHIHFSLIA 168 (241)
T ss_dssp T----EEECSEEEEEEEC
T ss_pred C----CCcCceEEEEEeC
Confidence 0 0236788887754
No 72
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=93.59 E-value=0.027 Score=62.57 Aligned_cols=67 Identities=22% Similarity=0.317 Sum_probs=49.7
Q ss_pred ccCceeeeeEeecCcccceEEEee--------cCceEEEEEEEEeCCcceeecCCCCCCCccccccceeeeecCCcceee
Q 000982 207 FENGEVDDIFFAPGYEIRGLVVAQ--------GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMF 278 (1201)
Q Consensus 207 ~~~~~v~~~l~i~G~~vsG~V~~~--------g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f 278 (1201)
.+...+.+...+.++.|+|-|..+ ...-+|++|++...+ .+++||++|+|++
T Consensus 144 nG~V~V~~~~~~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~--------------------~sa~tD~~G~f~I 203 (321)
T 3kcp_A 144 NGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTE--------------------LYAVTDANGYFEI 203 (321)
T ss_dssp CEEEEECCCCCCSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSS--------------------CEEECCTTSEEEE
T ss_pred CCEEEECCCCCCCCceEEEEEccccccccccchhccCCcEEEEEecc--------------------ceeEECCCceEEE
Confidence 333334444456788889988742 345578888887652 5899999999999
Q ss_pred ceecccc--eeeeeecc
Q 000982 279 KSVPCGQ--YELVPHYK 293 (1201)
Q Consensus 279 ~~LppG~--Y~v~~~~~ 293 (1201)
.++|+|. |+|.....
T Consensus 204 ~~vp~~~~~ytl~i~~~ 220 (321)
T 3kcp_A 204 TGVPANASGYTLKISRA 220 (321)
T ss_dssp EEECCEEEEEEEEEECT
T ss_pred eccCCCCccEEEEEeec
Confidence 9999998 99999643
No 73
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=93.54 E-value=0.029 Score=53.47 Aligned_cols=57 Identities=19% Similarity=0.329 Sum_probs=44.2
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceee---eeecCcceeeeccCCC
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLF---KNIIPGKYKLRASHPN 192 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F---~~l~PG~Y~l~~~~~g 192 (1201)
|+-.|++.. .|.|.+|+.|+|...+ +.+.+.+||+||+... ..+.+|.|+|.+....
T Consensus 12 lstHVLDt~-------~G~PAagv~V~L~~~~-~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~ 71 (116)
T 3qva_A 12 LSTHILDIS-------TGTPAEGVTVSLSREG-ETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGA 71 (116)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEETT-EEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHH
T ss_pred eeeEEeecC-------CCcCCCCCEEEEEEcc-EeEEEeccCCCCCccccccccCCCceEEEEEeHHH
Confidence 566777642 5789999999998765 6788999999999842 3467899999975433
No 74
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=93.47 E-value=1.2 Score=60.05 Aligned_cols=206 Identities=15% Similarity=0.074 Sum_probs=102.2
Q ss_pred eeEEEEEecccccccccc--cCCCceEE--EEe---eecceEEEEEcCCCCC----C-----cCCCceeEEEcCCCCCCC
Q 000982 53 HVTVELRTLDGLVKESTQ--CAPNGYYF--IPV---YDKGSFVIKVNGPEGW----S-----WNPDKVAVTVDDTGCNGN 116 (1201)
Q Consensus 53 gv~V~L~~~~G~~~~~t~--t~~nG~y~--i~~---l~~G~Y~l~~~~P~G~----~-----~~p~~~~v~Vd~~~~s~~ 116 (1201)
-++|+|.|++|+.+.+.. ++.+|.|. |++ ...|.|+|++...++- . |-+-..++.++....
T Consensus 136 ~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~--- 212 (1325)
T 2pn5_A 136 SVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVI--- 212 (1325)
T ss_dssp EEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEEEESSC---
T ss_pred cEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEEecCce---
Confidence 378999999998877652 34567655 333 2459999988654321 1 112223344433210
Q ss_pred cceeEEEeeeEEeeeEeeeecCccccccCCCCcc-eeEEEeccCCCeeeeeeecCccceeeeeecCc---------ceee
Q 000982 117 EDINFRFTGFTLLGRVVGAIGGESCLDKGGGPSN-VNVELLSHSGDLISSVITSSEGSYLFKNIIPG---------KYKL 186 (1201)
Q Consensus 117 ~dinf~~~g~~IsG~V~~~~g~~s~~~~g~plaG-v~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG---------~Y~l 186 (1201)
+...+-.+..+|....= .|.|++| ++|.+.......-...++|.+|.+.+. ++.. .|.|
T Consensus 213 ----~~~~~~~~~v~v~a~Y~------~G~Pv~G~~~v~v~~~~~~~~~~~~~d~~G~~~~~-~~~~~~~~~~~~~~~~v 281 (1325)
T 2pn5_A 213 ----PLEEHQAVNLTIEANYH------FGKPVQGVAKVELYLDDDKLKLKKELTVYGKGQVE-LRFDNFAMDADQQDVPV 281 (1325)
T ss_dssp ----CBGGGCEEEEEEEEEES------SSCBCEEEEEEEEEETTTTEEEEEEEEEESEEEEE-EECSSCCCSSSEEEEEE
T ss_pred ----EEecCCeEEEEEEEEEc------CCCeeeeEEEEEEEECCCCcceeEEEecCcEEEEE-EehhHhccccccceEEE
Confidence 00011112222222110 2689999 888776433222335678899998886 4321 2222
Q ss_pred ecc----CCCcEEEEeeeeEEEeeccCceee----eeEeecCcccceEEE--e-ecCceEEEE--EEEEeCCcceeecCC
Q 000982 187 RAS----HPNLSVEVRGSTEVELGFENGEVD----DIFFAPGYEIRGLVV--A-QGNPILGVH--IYLYSDDVGKVDCPQ 253 (1201)
Q Consensus 187 ~~~----~~g~~~~~~~~~~V~v~~~~~~v~----~~l~i~G~~vsG~V~--~-~g~Pl~Ga~--V~L~~~~~~~~~c~~ 253 (1201)
.++ ..|.... .+..+.+......+. ......|....+.|. + +|.|+++.. |.+...
T Consensus 282 ~a~V~e~~tg~~~~--~~~~i~i~~~~~~i~~~~~~~~~~~g~~~~~~v~~~~~dG~p~~~~~~~v~~~~~--------- 350 (1325)
T 2pn5_A 282 KVSFVEQYTNRTVV--KQSQITVYRYAYRVELIKESPQFRPGLPFKCALQFTHHDGTPAKGISGKVEVSDV--------- 350 (1325)
T ss_dssp EEEEEETTTCCEEE--EEEEEEEESSSCEEEEEESSSSBCTTSCEEEEEEEECTTSCBCTTCEEEEEEGGG---------
T ss_pred EEEEEECCCcEEEE--eeEEEEEEEeeEEEEEEeCCCcccCCCCEEEEEEEECCCCCcCCCCceeEEEEEe---------
Confidence 221 1232222 112233322222111 111223444444544 2 488888754 444432
Q ss_pred CCCCCccccccceeeeecCCcceeeceec--cccee-eeeec
Q 000982 254 GSGNALGERKALCHAVSDADGKFMFKSVP--CGQYE-LVPHY 292 (1201)
Q Consensus 254 g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp--pG~Y~-v~~~~ 292 (1201)
.+.+..+||++|...|.--+ .|.|. |.+.+
T Consensus 351 ---------~~~~~~~t~~~G~~~~~~~~~~~g~y~~l~v~~ 383 (1325)
T 2pn5_A 351 ---------RFETTTTSDNDGLIKLELQPSEGTEQLSIHFNA 383 (1325)
T ss_dssp ---------TEEEEEECCTTSEEEEEECCCTTCCEEEEEEEC
T ss_pred ---------cceEEEEeCCCCcEEEEEECCCCCeEEEEEEEE
Confidence 12356789999987765222 47786 77653
No 75
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=93.34 E-value=0.07 Score=62.59 Aligned_cols=75 Identities=19% Similarity=0.230 Sum_probs=52.9
Q ss_pred cccEEEEEEecCCCCCCCceeEEEeecCCCc--cc-CccccCCceeeeccccCccccchhh--hhhcccCCCceeEecCC
Q 000982 857 LSQISVRIYSKDDAGEPIPSVLLSLSGDDGY--RN-NSVSWAGGSFHFDNLFPGNFYLRPL--LKEYAFSPPAQAIELGS 931 (1201)
Q Consensus 857 l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~--r~-n~~T~~~G~~~f~~L~PG~Y~~~~~--~key~~~p~~~~i~v~~ 931 (1201)
...|.|.+.+..+++++|+||.|.|...++- .. ..+++ |+..+.+|.+|+|+|+++ ..+|.+ -.++.|+|++
T Consensus 24 ~t~v~i~K~~~~d~~~~L~GA~f~L~~~~g~~v~e~~w~s~--~~~~~~~L~~G~YtL~Et~AP~GY~~-a~~I~FtV~~ 100 (457)
T 2xi9_A 24 TTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSFQARVFSSN--DIGERIELSDGTYTLTELNSPAGYSI-AEPITFKVEA 100 (457)
T ss_dssp -CEEEEEEEETTBCSSCCCCCEEEEC---------CEEECC--SSCEEEECCSEEEEEEEEECCTTBCC-CCCEEEEEET
T ss_pred ceeEEEEEeccCCCCCccCCcEEEEEeCCCCeeeeeEEEeC--CceeEEeeCCceEEEEEecCCCCcee-ccCEEEEecC
Confidence 3568898888766789999999999876541 11 13344 444444799999999986 679998 5889999998
Q ss_pred Ccc
Q 000982 932 GES 934 (1201)
Q Consensus 932 G~~ 934 (1201)
++.
T Consensus 101 ~~v 103 (457)
T 2xi9_A 101 GKV 103 (457)
T ss_dssp TEE
T ss_pred CeE
Confidence 754
No 76
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=93.02 E-value=0.055 Score=54.10 Aligned_cols=30 Identities=27% Similarity=0.575 Sum_probs=27.1
Q ss_pred cccceeeeecCCcceeeceecccceeeeee
Q 000982 262 RKALCHAVSDADGKFMFKSVPCGQYELVPH 291 (1201)
Q Consensus 262 g~~~~~~~TD~~G~f~f~~LppG~Y~v~~~ 291 (1201)
...+..+++|++|+|.|.+||||+|.|...
T Consensus 85 ~~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a~ 114 (150)
T 3qec_A 85 ATYVREATTDQNGRFDFDHIPNGTYYISSE 114 (150)
T ss_dssp GGGCEEEECCTTSEEEEEEECSEEEEEEEE
T ss_pred hcceeEEEeCCCCcEEECCCCCccEEEEEE
Confidence 456788999999999999999999999984
No 77
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=92.94 E-value=0.11 Score=57.53 Aligned_cols=55 Identities=20% Similarity=0.393 Sum_probs=44.4
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--CCe-----------eeeeeecCccceeeeeecCcceeeec
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GDL-----------ISSVITSSEGSYLFKNIIPGKYKLRA 188 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~~-----------i~sttTd~~G~f~F~~l~PG~Y~l~~ 188 (1201)
..|.|+|++. ++.|++||.|+++..+ |.. -....||++|+|+|.-+.||.|.+..
T Consensus 134 l~v~G~V~D~--------~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p~ 201 (293)
T 1tmx_A 134 CWVEGTVTDT--------DGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPIPH 201 (293)
T ss_dssp EEEEEEEEET--------TSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECC--------CCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccCCC
Confidence 4578999984 4799999999999665 311 14578999999999999999999764
No 78
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=92.91 E-value=0.14 Score=45.75 Aligned_cols=50 Identities=22% Similarity=0.114 Sum_probs=40.0
Q ss_pred eeEEeeCCCcceeeEEEEE---cCccc-----ccccCCceeeeeeeecceeEEeeeeee
Q 000982 329 GGRVVDENDMGVEGVKILV---DGHER-----SITDRDGYYKLDQVTSNRYTIEAVKVH 379 (1201)
Q Consensus 329 ~G~V~d~~G~pl~Ga~V~l---~G~~~-----~~TDadG~y~~~~L~pG~Y~I~~~~~~ 379 (1201)
.=+|+|.+|+|++||.|.+ |-.+. ..||++|.+.| -.--|+-.|.+.+++
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~-~~G~Gd~~v~A~k~G 61 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASL-TAGKGDMLVWASKDG 61 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEE-ECCSEEEEEEEEETT
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEE-EEcCCceEEEeccCC
Confidence 3478999999999999988 43321 48999999998 566688888888876
No 79
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=92.87 E-value=11 Score=41.99 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=65.2
Q ss_pred CCCCCceeEEEeeccc--ceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCccccceE
Q 000982 957 GQPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDF 1034 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~~~f 1034 (1201)
+.++.+-.|+....+. ...+.......-.|.|.||.||+.|.+++.+....| .+.|..........--.++..
T Consensus 120 ~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~s~~~~~~~~~~~~~P~~l~~ 194 (368)
T 1fnf_A 120 SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQH-----ESTPLRGRQKTGLDSPTGIDF 194 (368)
T ss_dssp TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEE
T ss_pred CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCC-----CCCCeEeeecCCCCCCCccEE
Confidence 4456777777654321 222223334566899999999999999999753322 222322222211111122221
Q ss_pred EEeeccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEee-ccccceeecCCCCc-ceeeEecc
Q 000982 1035 LVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL-PMSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1035 ~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~-~~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
. ......|...=... .......+|..+.......... ..+ .....|.+..|.++ .|.+++..
T Consensus 195 ~---~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 258 (368)
T 1fnf_A 195 S---DITANSFTVHWIAP--RATITGYRIRHHPEHFSGRPRE-DRVPHSRNSITLTNLTPGTEYVVSIVA 258 (368)
T ss_dssp E---SCCSSEEEEEEECC--SSCCSEEEEEEECSCCSSCCEE-EEEETTCCEEEEESCCTTCEEEEEEEE
T ss_pred E---EccCCEEEEEEeCC--CCCcCEEEEEEecCCCCCCccE-EEeCCCcCEEEECCCCCCCEEEEEEEE
Confidence 1 11111122222111 1112344555544332222222 222 34467889999998 67777664
No 80
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=92.70 E-value=0.13 Score=53.97 Aligned_cols=54 Identities=20% Similarity=0.351 Sum_probs=43.7
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--CC------------eeeeeeecCc-cceeeeeecCcceeee
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSE-GSYLFKNIIPGKYKLR 187 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~------------~i~sttTd~~-G~f~F~~l~PG~Y~l~ 187 (1201)
..|.|+|++. ++.|++||.|+++..+ |. .-....||++ |+|+|.-+.||.|...
T Consensus 49 l~v~G~V~D~--------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 49 ILLLGQVYDG--------NGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEEECEECT--------TSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 4578999974 3699999999999665 31 1246789999 9999999999999975
No 81
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=92.69 E-value=0.14 Score=55.01 Aligned_cols=57 Identities=32% Similarity=0.479 Sum_probs=44.9
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--CC-----------------eeeeeeecCccceeeeeecCcceee
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD-----------------LISSVITSSEGSYLFKNIIPGKYKL 186 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~-----------------~i~sttTd~~G~f~F~~l~PG~Y~l 186 (1201)
..|.|+|++. ++.|++||.|+++..+ |. .-....||++|+|.|.-|.||.|.+
T Consensus 78 i~l~G~V~D~--------~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQ--------YGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEET--------TSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 4578999984 4799999999998654 31 1235689999999999999999998
Q ss_pred eccC
Q 000982 187 RASH 190 (1201)
Q Consensus 187 ~~~~ 190 (1201)
.-..
T Consensus 150 p~~~ 153 (238)
T 3t63_M 150 RNGP 153 (238)
T ss_dssp SSST
T ss_pred CCCC
Confidence 6543
No 82
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=92.61 E-value=0.11 Score=55.04 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=49.5
Q ss_pred eeeeEEeecCCCCCceeEEEeecc--c-----------------ceeeeeee-cCCCceEeecccCCceEEEEEEEecCC
Q 000982 948 ATGTITLLSGQPKDGVSVEARSES--K-----------------GYYEETVT-DTSGSYRLRGLHPDTTYVIKVVKKDGF 1007 (1201)
Q Consensus 948 ~~G~V~~~~g~p~~gv~v~~~~~~--~-----------------~~~~~~~T-d~~G~~~i~gL~pg~~y~v~~~~~~~~ 1007 (1201)
+.|+|.+.+|+|++|+.|++---+ + ..++-..| |++|.|+++-+.||+ |-.. +
T Consensus 55 v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~-yp~~----~-- 127 (209)
T 2bum_A 55 LEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGA-VPGR----K-- 127 (209)
T ss_dssp EEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCC-CBCS----T--
T ss_pred EEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCc-ccCC----C--
Confidence 489999999999999999984111 1 13567888 999999999999998 4311 1
Q ss_pred CcccccccCCceEEEEecc
Q 000982 1008 GSTKIERASPESVTVKVGS 1026 (1201)
Q Consensus 1008 ~~~~~~~~~P~~~~v~~~~ 1026 (1201)
| +..|.|+.+.|..
T Consensus 128 G-----~~R~~HIH~~V~~ 141 (209)
T 2bum_A 128 G-----STQAPHISLIIFA 141 (209)
T ss_dssp T-----CBCCCCEEEEEEC
T ss_pred C-----CccCcEEEEEEEC
Confidence 1 2357788887754
No 83
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=92.49 E-value=0.15 Score=56.56 Aligned_cols=55 Identities=16% Similarity=0.380 Sum_probs=44.5
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--C------------CeeeeeeecCccceeeeeecCcceeeec
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G------------DLISSVITSSEGSYLFKNIIPGKYKLRA 188 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g------------~~i~sttTd~~G~f~F~~l~PG~Y~l~~ 188 (1201)
..|.|+|++. ++.|++||.|+++..+ | ..-....||++|+|+|.-+.||.|.+--
T Consensus 130 l~l~G~V~D~--------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p~ 198 (290)
T 3n9t_A 130 ALVYGRVLDV--------QGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPIPT 198 (290)
T ss_dssp EEEEEEEEET--------TSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCCCC
Confidence 4578999984 4799999999998654 3 1134678999999999999999999754
No 84
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=92.49 E-value=0.05 Score=51.84 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=43.5
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEeccCC---CeeeeeeecCcccee----eeeecCcceeeeccCCCc
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG---DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g---~~i~sttTd~~G~f~----F~~l~PG~Y~l~~~~~g~ 193 (1201)
|+=.|++. ..|.|.+|+.|+|...++ +.+.+.+||+||+.. =..+.+|.|+|.+....|
T Consensus 6 lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 71 (114)
T 2g2n_A 6 LSVHILNQ-------QTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDY 71 (114)
T ss_dssp EEEEEEET-------TTTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHH
T ss_pred eEEEEecC-------CCcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHh
Confidence 45567664 258999999999987554 357899999999972 224678999998754444
No 85
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=92.45 E-value=0.11 Score=57.98 Aligned_cols=52 Identities=29% Similarity=0.406 Sum_probs=41.8
Q ss_pred eeeeeEEeecCCCCCceeEEEeecc----------------cceeeeeeecCCCceEeecccCCceEEE
Q 000982 947 SATGTITLLSGQPKDGVSVEARSES----------------KGYYEETVTDTSGSYRLRGLHPDTTYVI 999 (1201)
Q Consensus 947 s~~G~V~~~~g~p~~gv~v~~~~~~----------------~~~~~~~~Td~~G~~~i~gL~pg~~y~v 999 (1201)
.+.|+|.+.+|+|++|+.|++---+ -..++-..||++|.|+++-+.||+ |.|
T Consensus 135 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~-Yp~ 202 (311)
T 1dmh_A 135 ILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAG-YGC 202 (311)
T ss_dssp EEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCC-EEC
T ss_pred EEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCc-ccC
Confidence 3589999999999999999984111 123567899999999999999997 543
No 86
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=92.39 E-value=6.3 Score=44.26 Aligned_cols=135 Identities=19% Similarity=0.285 Sum_probs=65.7
Q ss_pred CCCCceeEEEeeccc--ceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCccccceEE
Q 000982 958 QPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFL 1035 (1201)
Q Consensus 958 ~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~~~f~ 1035 (1201)
.++.+-.|+....+. ...+.......-.|.|.||.||+.|.+++.+....| .+.|.............++.+.
T Consensus 122 ~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~s~~s~~~~~t~~~~p~~l~~~ 196 (375)
T 3t1w_A 122 STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG-----ESAPTTLTQQTAVPPPTDLRFT 196 (375)
T ss_dssp TTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEEE
T ss_pred CCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCc-----ccCCeeeeeecCCCCCceeEEE
Confidence 455566666554332 223444555667899999999999999999754322 2222232222111112222211
Q ss_pred EeeccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEeec-cccceeecCCCCc-ceeeEecc
Q 000982 1036 VFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLP-MSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1036 ~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~~-~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
... ... |...=.... ........|..+.......... ..++ ....|.+..|.++ .|.+++..
T Consensus 197 ~~~-~~s--i~l~W~~p~-~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 260 (375)
T 3t1w_A 197 NIG-PDT--MRVTWAPPP-SIDLTNFLVRYSPVKNEEDVAE-LSISPSDNAVVLTNLLPGTEYVVSVSS 260 (375)
T ss_dssp SCC-SSC--EEEEEECCS-SCCCCEEEEEEEEGGGTTCCEE-EEECTTCCEEEECSCCTTCEEEEEEEE
T ss_pred ecc-cCE--EEEEEcCCC-CCCccEEEEEEEeCCCCCCcEE-EEcCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 111 111 111111110 0112344555544332222222 2333 3467899999998 68777764
No 87
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=92.28 E-value=0.051 Score=52.32 Aligned_cols=60 Identities=17% Similarity=0.289 Sum_probs=45.4
Q ss_pred EEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCcccee-----eeeecCcceeeeccCCCc
Q 000982 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYL-----FKNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~-----F~~l~PG~Y~l~~~~~g~ 193 (1201)
.|+=.|++.. .|.|.+|+.|+|...+.+.+.+.+||+||+.. =..+.+|.|+|.+....|
T Consensus 10 ~lstHVLDt~-------~G~PAagv~V~L~~~~~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg~Y 74 (121)
T 2h0e_A 10 KLTTHILDLT-------CGKPAANVKIGLKRLGESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAGDY 74 (121)
T ss_dssp EEECCEEETT-------TTEECTTCEEEEEETTSCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHHHH
T ss_pred CeeEEEecCC-------CcCCCCCCEEEEEECCceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhHHh
Confidence 3566777642 58999999999987555668899999999973 224778999999754444
No 88
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=92.23 E-value=6.9 Score=43.65 Aligned_cols=107 Identities=12% Similarity=0.184 Sum_probs=60.8
Q ss_pred eeeeecCCcceeeceec--ccceeeeeeccccceEEeeCCCceeeEEeeeeeeccceeEEeeeeeeeEEeeCCCcce---
Q 000982 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGV--- 340 (1201)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--pG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sv~G~V~d~~G~pl--- 340 (1201)
+..+-..+|.|.+.-.| +|.|.|...+.+.+ +.-+...+.|.... .+....+....+.=...|..|+|+
T Consensus 159 ~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g~~----I~gSPF~v~V~~~~--d~~~v~~~~~~f~V~~~D~~gn~~~~G 232 (311)
T 1wlh_A 159 AKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNP----IKNMPIDVKCIEGA--NGEDSSFGSFTFTVAAKNKKGEVKTYG 232 (311)
T ss_dssp CEEEEETTTEEEEEECCCSSEEEEEEEEETTEE----CTTCSCEEEEECCC--CGGGCEEEEEEEEEECBCTTSSBCSSC
T ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEEECCEE----CCCCCEEEEECCCC--CCCceEEEeEEEEEEEeccCCCeeecC
Confidence 44555678999877666 68999999876643 33333444443321 011111111122212346666444
Q ss_pred -eeEEEEE---cCccc---ccccCCceeeeeee--ecceeEEeeeeee
Q 000982 341 -EGVKILV---DGHER---SITDRDGYYKLDQV--TSNRYTIEAVKVH 379 (1201)
Q Consensus 341 -~Ga~V~l---~G~~~---~~TDadG~y~~~~L--~pG~Y~I~~~~~~ 379 (1201)
....+.+ +| .+ .+.+.||.|.+.-. .+|.|+|.++-.+
T Consensus 233 ~~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g 279 (311)
T 1wlh_A 233 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 279 (311)
T ss_dssp CSCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETT
T ss_pred CCcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECC
Confidence 3456666 34 33 24668899877655 4699999988655
No 89
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=92.11 E-value=0.16 Score=55.86 Aligned_cols=55 Identities=29% Similarity=0.546 Sum_probs=44.2
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEeccC--CC------------eeeeeeecCccceeeeeecCcceeeec
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSEGSYLFKNIIPGKYKLRA 188 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~------------~i~sttTd~~G~f~F~~l~PG~Y~l~~ 188 (1201)
..|.|+|++. ++.|++||.|+++..+ |. .-....||++|+|.|.-|.||.|-+-.
T Consensus 132 l~l~G~V~D~--------~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p~ 200 (280)
T 3hhy_A 132 LVFSGQVTDL--------DGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIPT 200 (280)
T ss_dssp EEEEEEEECT--------TSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECC--------CCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCCCC
Confidence 3578999874 3699999999999665 31 124678999999999999999998754
No 90
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=91.96 E-value=2.3 Score=47.64 Aligned_cols=135 Identities=12% Similarity=0.181 Sum_probs=70.7
Q ss_pred cceeEEEeccCCCeee-eeeecCccceeeeee--cCcceeeeccCCCcEEEEeee-eEEEeeccC----ceee-eeEeec
Q 000982 149 SNVNVELLSHSGDLIS-SVITSSEGSYLFKNI--IPGKYKLRASHPNLSVEVRGS-TEVELGFEN----GEVD-DIFFAP 219 (1201)
Q Consensus 149 aGv~V~L~~~~g~~i~-sttTd~~G~f~F~~l--~PG~Y~l~~~~~g~~~~~~~~-~~V~v~~~~----~~v~-~~l~i~ 219 (1201)
..+++.+.+.+|..+. ..+-..+|.|.+.-. .+|.|.|.+...|..+. ++ ..+.|..+. ..+. ..|.+.
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g~~I~--gSPF~v~V~~~~d~~~v~~~~~~f~V~ 220 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIK--NMPIDVKCIEGANGEDSSFGSFTFTVA 220 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTEECT--TCSCEEEEECCCCGGGCEEEEEEEEEE
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECC--CCCEEEEECCCCCCCceEEEeEEEEEE
Confidence 4467788777774333 444557898876643 56899998876664432 11 333333211 1110 011110
Q ss_pred CcccceEEEeecCce----EEEEEEEEeCCcceeecCCCCCCCccccccceeeeecCCcceeeceec--ccceeeeeecc
Q 000982 220 GYEIRGLVVAQGNPI----LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVPHYK 293 (1201)
Q Consensus 220 G~~vsG~V~~~g~Pl----~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp--pG~Y~v~~~~~ 293 (1201)
-.+ ..|+|+ ....+.+...+ +...+..+.+.+|.|.+.-.| +|.|.|.+.+.
T Consensus 221 ~~D------~~gn~~~~G~~~l~v~i~~p~----------------g~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~ 278 (311)
T 1wlh_A 221 AKN------KKGEVKTYGGDKFEVSITGPA----------------EEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 278 (311)
T ss_dssp CBC------TTSSBCSSCCSCEEEEEESCC----------------SEEEEEEEECSSSEEEEEEEEECSEEEEEEEEET
T ss_pred Eec------cCCCeeecCCCcEEEEEECCC----------------CCceeEEEECCCCEEEEEEECCCCEeEEEEEEEC
Confidence 000 124333 22445554432 122355667789998666555 79999999776
Q ss_pred ccceEEeeCCCceeeEEe
Q 000982 294 GENTVFDVSPSLVSMSVR 311 (1201)
Q Consensus 294 ~~~~~~~~~P~~~~vtV~ 311 (1201)
+.+ +..+...+.|.
T Consensus 279 g~~----I~gsPf~v~v~ 292 (311)
T 1wlh_A 279 GKH----IEGSPFKQVLG 292 (311)
T ss_dssp TEE----CTTCSEEEEES
T ss_pred CEE----CCCCCEEEEEc
Confidence 643 33344444443
No 91
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=91.87 E-value=4.9 Score=49.58 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=34.4
Q ss_pred eeeeeEEeeCCCcceeeEEEEE-cCcccccccCCceeeee-eeec--ceeEEeee
Q 000982 326 FSVGGRVVDENDMGVEGVKILV-DGHERSITDRDGYYKLD-QVTS--NRYTIEAV 376 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l-~G~~~~~TDadG~y~~~-~L~p--G~Y~I~~~ 376 (1201)
+.+.-+|.+.+|.|+++..|.+ .+....+||++|...|. +.+. +.+.|+++
T Consensus 338 ~~~~v~v~~~dg~P~~~~~V~v~~~~~~~~td~~G~a~f~i~t~~~~~~l~i~~~ 392 (627)
T 3hrz_A 338 YELTVYVTNPDGSPAAHVPVVSEAFHSMGTTLSDGTAKLILNIPLNAQSLPITVR 392 (627)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEGGGTEEEECCTTSEEEEEECCCTTCSEEEEEEE
T ss_pred EEEEEEEECCCCCcCCCceEEEEcCcceeEECCCCeEEEEEECCCCCcEEEEEEE
Confidence 3444556788999999999988 34444689999987763 2222 34556554
No 92
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=91.86 E-value=0.065 Score=54.52 Aligned_cols=29 Identities=28% Similarity=0.602 Sum_probs=26.5
Q ss_pred ccceeeeecCCcceeeceecccceeeeee
Q 000982 263 KALCHAVSDADGKFMFKSVPCGQYELVPH 291 (1201)
Q Consensus 263 ~~~~~~~TD~~G~f~f~~LppG~Y~v~~~ 291 (1201)
.....+++|++|+|.|.+||+|+|.|...
T Consensus 106 ~y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~ 134 (170)
T 1xpn_A 106 TYVREATTDQNGRFDFDHIPNGTYYISSE 134 (170)
T ss_dssp HHCEEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred cceeEEEecCCCcEEecCCCCccEEEEEE
Confidence 45789999999999999999999999984
No 93
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=91.40 E-value=0.17 Score=55.08 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=40.8
Q ss_pred eeeeEEeecCCCCCceeEEEeecc---------------cceeeeeeecCCCceEeecccCCce
Q 000982 948 ATGTITLLSGQPKDGVSVEARSES---------------KGYYEETVTDTSGSYRLRGLHPDTT 996 (1201)
Q Consensus 948 ~~G~V~~~~g~p~~gv~v~~~~~~---------------~~~~~~~~Td~~G~~~i~gL~pg~~ 996 (1201)
+.|+|.+.+|+|++|+.|++---+ ...++-..||++|.|+++-+.||+|
T Consensus 106 l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Y 169 (257)
T 3o5u_A 106 FTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPY 169 (257)
T ss_dssp EEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCE
T ss_pred EEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCc
Confidence 489999999999999999984111 1257788999999999999999973
No 94
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=91.38 E-value=0.061 Score=51.39 Aligned_cols=59 Identities=24% Similarity=0.353 Sum_probs=42.6
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEeccC--C--CeeeeeeecCcccee----eeeecCcceeeeccCCCc
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g--~~i~sttTd~~G~f~----F~~l~PG~Y~l~~~~~g~ 193 (1201)
|+=.|++. ..|.|.+|+.|+|...+ + +.+.+.+||+||+.. -..+.+|.|+|.+.-..|
T Consensus 3 lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 69 (115)
T 1f86_A 3 LMVKVLDA-------VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 69 (115)
T ss_dssp EEEEEEET-------TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eeEEEccC-------CCCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHh
Confidence 44456654 25899999999998642 3 357899999999983 234678999999754333
No 95
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=91.01 E-value=0.073 Score=51.13 Aligned_cols=59 Identities=19% Similarity=0.333 Sum_probs=42.7
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEeccC--C--CeeeeeeecCcccee----eeeecCcceeeeccCCCc
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g--~~i~sttTd~~G~f~----F~~l~PG~Y~l~~~~~g~ 193 (1201)
|+=.|++. ..|.|.+|+.|+|+..+ + +.+.+.+||+||+.. =..+.+|.|+|.+.-..|
T Consensus 4 lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 70 (119)
T 1oo2_A 4 LMVKILDA-------VKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKAY 70 (119)
T ss_dssp EEEEEEET-------TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHHH
T ss_pred eeEEEecC-------CCcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHHh
Confidence 44566654 25799999999998642 3 357899999999973 224678999999754333
No 96
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=90.95 E-value=0.15 Score=48.73 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=65.3
Q ss_pred ccEEEEEEecCCCCCCCceeEEEeecCCCcccCccccCCceeee---ccccCccccchhhhhhc-------ccCC-Ccee
Q 000982 858 SQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHF---DNLFPGNFYLRPLLKEY-------AFSP-PAQA 926 (1201)
Q Consensus 858 ~~i~v~v~~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f---~~L~PG~Y~~~~~~key-------~~~p-~~~~ 926 (1201)
+.|+.+|.|. ..|.|-+||.++|...+..-....||+||++.. ..|.||.|-|+.-..+| .|=| -+..
T Consensus 10 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Yf~~~g~~~F~p~V~v~ 88 (116)
T 3qva_A 10 STLSTHILDI-STGTPAEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAWFARAGRESVFTRAQID 88 (116)
T ss_dssp BCEEEEEEET-TTTEECTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHHHHHTTCCCSEEEEEEE
T ss_pred CCeeeEEeec-CCCcCCCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHHHhhcCCCcceeeEEEE
Confidence 6789999998 569999999999987642223468999999853 35788999888655444 2333 3566
Q ss_pred EecCC--CcceeEEEEEEEEEEeee
Q 000982 927 IELGS--GESREVIFQATRVAYSAT 949 (1201)
Q Consensus 927 i~v~~--G~~~~v~~~~~r~~~s~~ 949 (1201)
|.|++ +++-+|-+-..+.+||.|
T Consensus 89 F~i~d~~~~HYHVPLLlSP~gYSTY 113 (116)
T 3qva_A 89 FVIGEAAEDHFHLPFLIAPGGWSTY 113 (116)
T ss_dssp EEC-----CCEECCEEEETTEEEEE
T ss_pred EEeCCCCCCCEEEeEEecCCccccc
Confidence 78887 577888888888888765
No 97
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=90.74 E-value=0.064 Score=52.65 Aligned_cols=60 Identities=23% Similarity=0.376 Sum_probs=44.9
Q ss_pred EEeeeEeeeecCccccccCCCCcceeEEEeccCC-----CeeeeeeecCcccee--e--eeecCcceeeeccCCCc
Q 000982 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG-----DLISSVITSSEGSYL--F--KNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g-----~~i~sttTd~~G~f~--F--~~l~PG~Y~l~~~~~g~ 193 (1201)
.|+-.|++.. .|.|.+|+.|+|...++ ..+.+.+||+||+.. + ..+.+|.|+|.+....|
T Consensus 27 ~LTtHVLDt~-------~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 95 (138)
T 3iwv_A 27 PLSTHVLNIA-------QGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKY 95 (138)
T ss_dssp CEECCEEETT-------TTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHH
T ss_pred CceEEEeecC-------CccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHH
Confidence 4677787742 57899999999986442 357889999999985 2 24778999999855444
No 98
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=90.70 E-value=0.29 Score=46.79 Aligned_cols=94 Identities=15% Similarity=0.265 Sum_probs=69.3
Q ss_pred cEEEEEEecCCCCCCCceeEEEeecC---CCcc--cCccccCCceee----eccccCccccchhhhhhc-------ccCC
Q 000982 859 QISVRIYSKDDAGEPIPSVLLSLSGD---DGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFSP 922 (1201)
Q Consensus 859 ~i~v~v~~~~~~~~pL~~vl~slsg~---~~~r--~n~~T~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~p 922 (1201)
.|+.+|.|. ..|.|-+|+.+.|... +..+ ....||+||++. -..+.+|.|-|+.-..+| .|=|
T Consensus 2 ~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~g~~~F~p 80 (115)
T 1f86_A 2 PLMVKVLDA-VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFHE 80 (115)
T ss_dssp CEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHHHHHTTCCCSEE
T ss_pred CeeEEEccC-CCCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHhHhhcCCCCCcc
Confidence 577899987 5699999999988642 2222 257899999983 236789999888765555 2222
Q ss_pred -CceeEecCCC--cceeEEEEEEEEEEeeeeeEE
Q 000982 923 -PAQAIELGSG--ESREVIFQATRVAYSATGTIT 953 (1201)
Q Consensus 923 -~~~~i~v~~G--~~~~v~~~~~r~~~s~~G~V~ 953 (1201)
-+..|.|++. ++-+|=+-..+.+||-+.-|+
T Consensus 81 ~V~i~F~i~d~~~~HYHVPLLlSP~~YST~~~v~ 114 (115)
T 1f86_A 81 HAEVVFTANDSGPRRYTIAALLSPYSYSTMAVVT 114 (115)
T ss_dssp EEEEEEEESTTSCCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEECCCCCCCEEEeEEecCCcceEEEEec
Confidence 3466889874 788899999999999877664
No 99
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=90.68 E-value=0.17 Score=55.63 Aligned_cols=65 Identities=8% Similarity=0.065 Sum_probs=47.2
Q ss_pred cccEEEEEEecCCC-CCCCceeE--EEeecCCCc---ccCccccCCceeeeccc-cCccccchhh-hhhcccC
Q 000982 857 LSQISVRIYSKDDA-GEPIPSVL--LSLSGDDGY---RNNSVSWAGGSFHFDNL-FPGNFYLRPL-LKEYAFS 921 (1201)
Q Consensus 857 l~~i~v~v~~~~~~-~~pL~~vl--~slsg~~~~---r~n~~T~~~G~~~f~~L-~PG~Y~~~~~-~key~~~ 921 (1201)
-|+|.|++.++++. ..+|+||. |.|-..++. .....++++|.+.|.+| .+|+|+|++. +.+|.+.
T Consensus 156 ~~~~~~~K~d~~~~~~~~L~GA~~~F~l~~~~~~~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a~GY~~~ 228 (262)
T 2x9z_A 156 NGDLTLTKTWVDATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSAD 228 (262)
T ss_dssp TSCEEEEEEEECTTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEE
T ss_pred cccEEEEEEcCCCCcccCcCCcEEEEEEEECCCCcEEEEEEecCCceEEEEeCCCCCCCEEEEEEEeCCcccc
Confidence 47888988887521 24899955 999765432 11112799999999999 7999999974 3788854
No 100
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=90.37 E-value=12 Score=37.25 Aligned_cols=132 Identities=19% Similarity=0.197 Sum_probs=67.2
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCccccceEEEee
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFE 1038 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~~~f~~~~ 1038 (1201)
++.+-.|+....++...........-.|.|.||.||..|.+++.+..+ ...+.|..+.+.....-..++.+..+.
T Consensus 33 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~-----~~~s~~~~~~~~t~p~~P~~l~~~~~~ 107 (186)
T 1qr4_A 33 KFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG-----RHKSKPTTIKGSTVVGSPKGISFSDIT 107 (186)
T ss_dssp CCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS-----SCBCCCEEEEEECCCCCCSCEEEESCC
T ss_pred CccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC-----CccCCCEEEEEECCCCCCCccEEEEeC
Confidence 455666655533332333333445568999999999999999998532 222334444443332233333332221
Q ss_pred ccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEee-ccccceeecCCCCc-ceeeEecc
Q 000982 1039 QPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL-PMSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1039 ~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~-~~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
. ..|...=.... .......|..+..+... ... ..+ .....|.+..|.++ .|.+++..
T Consensus 108 ~---~sv~l~W~~p~--~~i~~Y~v~~~~~~~~~-~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 166 (186)
T 1qr4_A 108 E---NSATVSWTPPR--SRVDSYRVSYVPITGGT-PNV-VTVDGSKTRTKLVKLVPGVDYNVNIIS 166 (186)
T ss_dssp S---SCEEEEECCCS--SCCSEEEEEEEETTCCC-CEE-EEEETTCCEEEECSCCSSCEEEEEEEE
T ss_pred C---CEEEEEEECCC--CcccEEEEEEEeCCCCC-ceE-EEcCCCcCEEEEcCCCCCCEEEEEEEE
Confidence 1 11221111111 11234556555433221 111 222 23466889999998 78888875
No 101
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=90.33 E-value=0.099 Score=50.76 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=43.5
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEecc--CC--CeeeeeeecCcccee----eeeecCcceeeeccCCCc
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSH--SG--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~--~g--~~i~sttTd~~G~f~----F~~l~PG~Y~l~~~~~g~ 193 (1201)
|+=.|++.. .|.|.+|+.|+|+.. ++ +.+.+.+||+||+.. -..+.+|.|+|.+.-..|
T Consensus 12 LStHVLDt~-------~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 78 (127)
T 2h4e_A 12 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 78 (127)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred EEEEEecCC-------CcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHHh
Confidence 555677642 589999999999864 33 457899999999983 234678999999754333
No 102
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=90.19 E-value=4.6 Score=54.78 Aligned_cols=208 Identities=18% Similarity=0.248 Sum_probs=104.1
Q ss_pred eEEEeccCCCeeee--eeecCccceeee-----eecCcceeeeccCC-CcE----EEE----eeeeEEEeeccCceeeee
Q 000982 152 NVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP-NLS----VEV----RGSTEVELGFENGEVDDI 215 (1201)
Q Consensus 152 ~V~L~~~~g~~i~s--ttTd~~G~f~F~-----~l~PG~Y~l~~~~~-g~~----~~~----~~~~~V~v~~~~~~v~~~ 215 (1201)
.|+|.+.+|..+.. ..++..|.++.+ ....|.|+|.+... +-. +.+ .|+.+|.+.... .
T Consensus 141 ~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~F~V~eYvlP~FeV~v~~~~-----~ 215 (1451)
T 4acq_A 141 LVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVEEFVLPKFEVQVTVPK-----I 215 (1451)
T ss_dssp EEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTCCEEEEEEEECCCCCCSCEEEEECCS-----E
T ss_pred EEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecCCceEEEEEEEeeeeCCcEEEEEeCCc-----e
Confidence 57888999977654 467778866433 22459999998754 221 211 233444443221 1
Q ss_pred EeecCcccceEEEee---cCceEEEEEEEEe--CCcceeecCCCCCCCccccccce---eeeecCCcceeecee----c-
Q 000982 216 FFAPGYEIRGLVVAQ---GNPILGVHIYLYS--DDVGKVDCPQGSGNALGERKALC---HAVSDADGKFMFKSV----P- 282 (1201)
Q Consensus 216 l~i~G~~vsG~V~~~---g~Pl~Ga~V~L~~--~~~~~~~c~~g~~~~~~~g~~~~---~~~TD~~G~f~f~~L----p- 282 (1201)
+.+.+-.+.++|.+. |+|+.| .+++.- .......|.. .....+| ..++|.+|.+.+.-. .
T Consensus 216 ~~~~~~~~~~~i~a~Y~~G~pV~G-~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 288 (1451)
T 4acq_A 216 ITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRKYSDASDCHG------EDSQAFCEKFSGQLNSHGCFYQQVKTKVFQL 288 (1451)
T ss_dssp EESSCSCCEEEEEEECSSSCBCCC-EEEECCBCCCTTTTTSCS------SCCCCCBCCEEEECCSSCCCEEECCGGGSCS
T ss_pred EeecCCEEEEEEEEEEcCCCEEcc-eEEEEEEEeccccccccc------cccccccceeeEEEcCCeEEEEEEEHHHhcc
Confidence 233444566677653 999999 344422 1100000100 0001122 457788998877521 1
Q ss_pred -----ccceeeeeecc--ccceE------EeeCCCceeeEEeeeeeeccceeEEee--eeeeeEEeeCCCcceeeEEEEE
Q 000982 283 -----CGQYELVPHYK--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEGVKILV 347 (1201)
Q Consensus 283 -----pG~Y~v~~~~~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sv~G~V~d~~G~pl~Ga~V~l 347 (1201)
...+.|.+.-. +.+.. +.+......+..... +. +-.+| |.+.-+|.+.+|.|+++..|.+
T Consensus 289 ~~~~~~~~l~V~atVtE~gtg~~~~~~~~i~i~~s~~~i~f~~t----~~-~fkPG~pf~~~v~v~~~dg~P~~~~~v~v 363 (1451)
T 4acq_A 289 KRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFVKV----DS-HFRQGIPFFGQVRLVDGKGVPIPNKVIFI 363 (1451)
T ss_dssp SSSCCBCBCEEEEECSSSCCSCCEEECCCCEEECCCSEEEEEEE----CS-EECSSSCCEEEEEEECTTSCBCCSCBCEE
T ss_pred hhhccCeEEEEEEEEEEccceEEEeceEEEEEEeeeeEEEEecC----CC-cccCCCcEEEEEEEEcCCCCcCCCceEEE
Confidence 11333333211 11110 111111111221111 11 22234 3444556788999999998887
Q ss_pred --cCc---ccccccCCceeeee-eee---cceeEEeee
Q 000982 348 --DGH---ERSITDRDGYYKLD-QVT---SNRYTIEAV 376 (1201)
Q Consensus 348 --~G~---~~~~TDadG~y~~~-~L~---pG~Y~I~~~ 376 (1201)
++. ...+||++|...|. +.+ .+.++|+++
T Consensus 364 ~~~~~~~~~~~~t~~~G~a~f~i~~~~~~~~~l~i~~~ 401 (1451)
T 4acq_A 364 RGNEANYYSNATTDEHGLVQFSINTTNVMGTSLTVRVN 401 (1451)
T ss_dssp EETTTCCCCCCBCCTTSEEEEECCCCSSSCEEEEEESC
T ss_pred EecccceeeeeEeCCCCcEEEEEeCCCCCCcEEEEEEE
Confidence 332 23589999976663 222 245778765
No 103
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=90.04 E-value=6.1 Score=54.04 Aligned_cols=207 Identities=22% Similarity=0.238 Sum_probs=102.3
Q ss_pred eeEEEeccCCCeeeeee--ecCccceeeeee-cCcceeeeccCCCcE------EEE----eeeeEEEeeccCceeeeeEe
Q 000982 151 VNVELLSHSGDLISSVI--TSSEGSYLFKNI-IPGKYKLRASHPNLS------VEV----RGSTEVELGFENGEVDDIFF 217 (1201)
Q Consensus 151 v~V~L~~~~g~~i~stt--Td~~G~f~F~~l-~PG~Y~l~~~~~g~~------~~~----~~~~~V~v~~~~~~v~~~l~ 217 (1201)
++|.|.+++|..+.... ++..+.|.+..- +.|.|+|.+...+-. +.+ .|+.+|.+..... .+.
T Consensus 161 ~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~~~~~~~~~~F~VeeYvlP~FeV~v~~~~~----~~~ 236 (1642)
T 3prx_B 161 VIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEK----FFY 236 (1642)
T ss_dssp EEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEETTEEEEEEEEEEECSCCCCSEEEEEEESSS----EEE
T ss_pred EEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeCCCCcEEEEEEEEEEEecCcEEEEEeccce----eEE
Confidence 67788899996665432 223555655544 559999998654321 111 2334444432211 111
Q ss_pred ec-CcccceEEEee---cCceEEEEEEEEe---CCcceeecCCCCCCCccccccceeeeecCCcceeecee------cc-
Q 000982 218 AP-GYEIRGLVVAQ---GNPILGVHIYLYS---DDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV------PC- 283 (1201)
Q Consensus 218 i~-G~~vsG~V~~~---g~Pl~Ga~V~L~~---~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~L------pp- 283 (1201)
+. +-.+...|.+. |+|++|.....+. .+.....| ........+|.+|.|.|.-- +.
T Consensus 237 ~~~~~~~~v~V~ArY~yGkPV~G~v~v~fg~~~~~~~~~~~----------~~l~~~~~~dg~G~~~~~~~~~~~~~~~~ 306 (1642)
T 3prx_B 237 IDGNENFHVSITARYLYGEEVEGVAFVLFGVKIDDAKKSIP----------DSLTRIPIIDGDGKATLKRDTFRSRFPNL 306 (1642)
T ss_dssp TTSCCCEEEEEEEEETTSCBCCEEEEEEEEEEETTEEEECG----------GGCEEEEEBTTEEEEEECHHHHHHHCCCG
T ss_pred ecCCCeEEEEEEEEeCCCCceeeeEEEEEEeccCCCccccc----------cccceeEEecCcEEEEEehhhhccccccc
Confidence 22 44555666653 9999885332221 11000000 00012356899999987521 11
Q ss_pred ----c-ceeeeeec---cccce------EEeeCCCceeeEEeeeeeeccceeEEeee--eeeeEEeeCCCcceeeEEEEE
Q 000982 284 ----G-QYELVPHY---KGENT------VFDVSPSLVSMSVRHQHVTVPEKFQVTGF--SVGGRVVDENDMGVEGVKILV 347 (1201)
Q Consensus 284 ----G-~Y~v~~~~---~~~~~------~~~~~P~~~~vtV~~~~~~l~~~f~~~g~--sv~G~V~d~~G~pl~Ga~V~l 347 (1201)
| .+.|.+.- .+... ...+.+....+.+.. .+ .|-.+|. .+.-+|.+++|.|+++..|.+
T Consensus 307 ~~~~~~~l~V~atV~eE~gg~~~~~~~~~i~i~~~~~~i~f~~----~~-~~~kpG~p~~~~v~v~~~dg~P~~~~~V~v 381 (1642)
T 3prx_B 307 NELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTK----TP-KYFKPGMPYELTVYVTNPDGSPAAHVPVVS 381 (1642)
T ss_dssp GGTSSEEEEEEEEEEETTSSCEEEEEEEEEEEESCSCEEECTT----SC-SEECTTSCEEEEEEEECTTSCBCCSCEEEE
T ss_pred ccccceEEEEEEEEEEeCCCCEEEeeeeeEEEEecceEEEEEe----Cc-cccCCCCCEEEEEEEECCCCCCCCCceEEE
Confidence 1 12333211 11111 111222222222211 11 2323343 344456788999999999998
Q ss_pred -cCcccccccCCceeeee-eeec--ceeEEeee
Q 000982 348 -DGHERSITDRDGYYKLD-QVTS--NRYTIEAV 376 (1201)
Q Consensus 348 -~G~~~~~TDadG~y~~~-~L~p--G~Y~I~~~ 376 (1201)
.+....+||++|...|. +.+. ..+.|+++
T Consensus 382 ~~~~~~~tTd~~G~a~f~i~t~~~~~~l~i~~~ 414 (1642)
T 3prx_B 382 EAFHSMGTTLSDGTAKLILNIPLNAQSLPITVR 414 (1642)
T ss_dssp GGGTEEEECCTTSEEEEEECCCTTCCCCEEEEE
T ss_pred EeccceeeeCCCceEEEEEECCCCCcEEEEEEE
Confidence 34444689999987663 2332 34667665
No 104
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=89.77 E-value=16 Score=37.30 Aligned_cols=73 Identities=18% Similarity=0.286 Sum_probs=42.9
Q ss_pred CCceeEecCCCcceeEEEEEEEEEEeeeeeEEeecCCCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEE
Q 000982 922 PPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVI 999 (1201)
Q Consensus 922 p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~~~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v 999 (1201)
|++..+.+.+-....+.|.=.+. .+.++.+-.|+....+ ............-.|.|.||.|++.|.+
T Consensus 24 P~P~~l~~~~~~~~sv~lsW~~p-----------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 24 PQPTDLSFVDITDSSIGLRWTPL-----------NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCCEEEEEECCTTTCEEEEEECC-----------SSSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred cCCCccEEEecCCCEEEEEecCC-----------CCCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEE
Confidence 44555555554344444332222 1335556666655332 1223333445567899999999999999
Q ss_pred EEEEec
Q 000982 1000 KVVKKD 1005 (1201)
Q Consensus 1000 ~~~~~~ 1005 (1201)
++.+..
T Consensus 93 ~V~a~~ 98 (203)
T 2gee_A 93 SVYTVK 98 (203)
T ss_dssp EEEEES
T ss_pred EEEEEe
Confidence 999754
No 105
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=89.74 E-value=0.47 Score=45.20 Aligned_cols=91 Identities=20% Similarity=0.338 Sum_probs=66.3
Q ss_pred ccEEEEEEecCCCCCCCceeEEEeecCC--Ccc--cCccccCCceee----eccccCccccchhhhhhc-------ccCC
Q 000982 858 SQISVRIYSKDDAGEPIPSVLLSLSGDD--GYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFSP 922 (1201)
Q Consensus 858 ~~i~v~v~~~~~~~~pL~~vl~slsg~~--~~r--~n~~T~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~p 922 (1201)
+.|+.+|.|. ..|.|-+|+.+.|...+ .++ ...+||+||++. =..+.+|.|-|+.-..+| .|=|
T Consensus 4 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~~~~~F~p 82 (114)
T 2g2n_A 4 NILSVHILNQ-QTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFP 82 (114)
T ss_dssp CCEEEEEEET-TTTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHHHHHTTCCCSCS
T ss_pred CCeEEEEecC-CCcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHhHhhcCCCCCcc
Confidence 6788999998 66999999999886532 222 257899999983 236889999887655444 2333
Q ss_pred -CceeEecCC-CcceeEEEEEEEEEEeee
Q 000982 923 -PAQAIELGS-GESREVIFQATRVAYSAT 949 (1201)
Q Consensus 923 -~~~~i~v~~-G~~~~v~~~~~r~~~s~~ 949 (1201)
-+..|.|.+ +++-+|-+-..+.+||.|
T Consensus 83 ~V~i~F~i~d~~~HYHVPLLlSP~~YSTY 111 (114)
T 2g2n_A 83 EIPVEFHINKVNEHYHVPLLLSQYGYSTY 111 (114)
T ss_dssp CEEEEEEESSTTSCEEEEEEEETTEEEEE
T ss_pred eEEEEEEECCCCCCeEEeEEecCCccccc
Confidence 456688876 577888888888888765
No 106
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=89.70 E-value=0.45 Score=46.20 Aligned_cols=97 Identities=15% Similarity=0.256 Sum_probs=72.1
Q ss_pred cccEEEEEEecCCCCCCCceeEEEeecC--CC-cc--cCccccCCceee----eccccCccccchhhhhhc-------cc
Q 000982 857 LSQISVRIYSKDDAGEPIPSVLLSLSGD--DG-YR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AF 920 (1201)
Q Consensus 857 l~~i~v~v~~~~~~~~pL~~vl~slsg~--~~-~r--~n~~T~~~G~~~----f~~L~PG~Y~~~~~~key-------~~ 920 (1201)
.+.|+.+|.|. ..|.|-+|+.+.|... ++ ++ ...+||+||++. -..|.+|.|-|+.-..+| .|
T Consensus 9 ~~~LStHVLDt-~~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Yf~~~g~~~F 87 (127)
T 2h4e_A 9 KXPLMVKVLDA-VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPF 87 (127)
T ss_dssp -CCEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHHHHHTTCCCS
T ss_pred cCCEEEEEecC-CCcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHHhHhhcCCCCC
Confidence 46789999998 6699999999998642 22 22 257899999983 236889999888766565 22
Q ss_pred CC-CceeEecCCC--cceeEEEEEEEEEEeeeeeEEe
Q 000982 921 SP-PAQAIELGSG--ESREVIFQATRVAYSATGTITL 954 (1201)
Q Consensus 921 ~p-~~~~i~v~~G--~~~~v~~~~~r~~~s~~G~V~~ 954 (1201)
=| -+..|.|.+. +.-+|=+-..+.+||-+.-|.+
T Consensus 88 ~p~V~I~F~i~d~~~~HYHVPLLlSP~gYST~~~v~~ 124 (127)
T 2h4e_A 88 HEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTN 124 (127)
T ss_dssp EEEEEEEEEESTTSCCEEEEEEEEETTEEEEEEEEEC
T ss_pred cceEEEEEEECCCCCCCEEEeEEecCCcceeeEEecc
Confidence 22 3566888874 7888999999999999887765
No 107
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=89.68 E-value=0.44 Score=52.36 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=38.0
Q ss_pred ceEEEE--EEEEeCCcceeecCCCCCCCccccccceeee-ecCCcceeecee-cccceeeeeeccccceEEe
Q 000982 233 PILGVH--IYLYSDDVGKVDCPQGSGNALGERKALCHAV-SDADGKFMFKSV-PCGQYELVPHYKGENTVFD 300 (1201)
Q Consensus 233 Pl~Ga~--V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~-TD~~G~f~f~~L-ppG~Y~v~~~~~~~~~~~~ 300 (1201)
+|+||. |.|+..+.. .++..+. ||++|.+.|.+| .+|+|+|.+... .++...
T Consensus 173 ~L~GA~~~F~l~~~~~~---------------~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a-~GY~~~ 228 (262)
T 2x9z_A 173 IPAGAEATFDLVNAQAG---------------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSAD 228 (262)
T ss_dssp CCCCSCEEEEEEETTTC---------------CEEEEEEECTTCSEEEECSCCTTSCEEEEECCB-TTBEEE
T ss_pred CcCCcEEEEEEEECCCC---------------cEEEEEEecCCceEEEEeCCCCCCCEEEEEEEe-CCcccc
Confidence 899966 999986321 1222233 899999999999 799999999755 554433
No 108
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=89.57 E-value=6 Score=41.04 Aligned_cols=142 Identities=15% Similarity=0.186 Sum_probs=74.7
Q ss_pred eeeeeEEeeCCCcceeeEEEEEcCcccccccCCc--eeeeeeeecceeEEeeeeeee---eec-cceeeEeecCCccccc
Q 000982 326 FSVGGRVVDENDMGVEGVKILVDGHERSITDRDG--YYKLDQVTSNRYTIEAVKVHY---KFN-KLKEYMVLPNMASIAD 399 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l~G~~~~~TDadG--~y~~~~L~pG~Y~I~~~~~~y---~~~-~~~~v~v~p~~~~i~d 399 (1201)
..|.+... .++ +|..++|++||..+.. +..+ .|.+..+.+|.|+|++++-.. ... ....+.+..+.+....
T Consensus 19 vtv~~~As-~d~-~V~~Ve~~~dg~~v~~-~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vtV~~~~~Ptv~ 95 (190)
T 3pdd_A 19 INISATVK-SKT-PVSKVEFYNGDTLISS-DTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKPTVK 95 (190)
T ss_dssp EEEEEEEC-CSS-CEEEEEEEETTEEEEE-ECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEEEECCCCCEEE
T ss_pred EEEEEEEe-CCC-CEEEEEEEECCEEEcc-ccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEEeccCCCCcee
Confidence 34555665 334 8999999999987752 3333 455666789999999887431 111 1113444422221111
Q ss_pred ccee----------eeeeeeeEEEecCCceeEEEeccCCCCCCcccccccCCCCeEEE--eCCCceeeeeeecCCCCCcc
Q 000982 400 IKAI----------SYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNNGNFCFE--VPPGEYRLSAMAATPESSSG 467 (1201)
Q Consensus 400 I~~~----------~~~v~G~V~~~~~~~~a~VtL~~~~~~~~~~~t~Td~~G~f~f~--L~PG~Y~v~~~~~~~~~~~G 467 (1201)
|... ...|++...+.++ .-.+|.+..+.. ..-++..+.|.+. .++|.|+|++.+.+. .|
T Consensus 96 itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg~-----~v~t~t~~~y~~~~~~~~G~~tl~a~A~D~---aG 166 (190)
T 3pdd_A 96 LTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGE-----VIGSDREAPYEYEWKAVEGNHEISVIAYDD---DD 166 (190)
T ss_dssp EEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETTE-----EEEEECSSSEEEEEECCSEEEEEEEEEEET---TC
T ss_pred ecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECCE-----EEecccCCCEEEEEecCCeeEEEEEEEEEC---CC
Confidence 2110 1133333322111 235555542211 2234556778887 578999999988654 33
Q ss_pred eeecCccceEEe
Q 000982 468 ILFLPPYADVVV 479 (1201)
Q Consensus 468 ~~~~p~~~~V~V 479 (1201)
-.-....+.|+|
T Consensus 167 n~s~s~~vtvtv 178 (190)
T 3pdd_A 167 AASTPDSVKIFV 178 (190)
T ss_dssp CBCCCEEEEEEE
T ss_pred CEEecceEEEEE
Confidence 222333445555
No 109
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=89.16 E-value=0.34 Score=46.50 Aligned_cols=96 Identities=20% Similarity=0.302 Sum_probs=70.8
Q ss_pred ccEEEEEEecCCCCCCCceeEEEeecC---CCcc--cCccccCCceee----eccccCccccchhhhhhc-------ccC
Q 000982 858 SQISVRIYSKDDAGEPIPSVLLSLSGD---DGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFS 921 (1201)
Q Consensus 858 ~~i~v~v~~~~~~~~pL~~vl~slsg~---~~~r--~n~~T~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~ 921 (1201)
+.|+.+|.|. ..|.|-+|+.+.|... +.++ ....||+||++. =..|.+|.|-|+.-..+| .|=
T Consensus 2 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~g~~~F~ 80 (119)
T 1oo2_A 2 CPLMVKILDA-VKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKAYWTNQGSTPFH 80 (119)
T ss_dssp CSEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHHHHHHTTCCCSE
T ss_pred CceeEEEecC-CCcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHHhHhhcCCCCCc
Confidence 4688899997 5699999999998642 2222 357899999983 235789999888665555 222
Q ss_pred C-CceeEecCCC--cceeEEEEEEEEEEeeeeeEEe
Q 000982 922 P-PAQAIELGSG--ESREVIFQATRVAYSATGTITL 954 (1201)
Q Consensus 922 p-~~~~i~v~~G--~~~~v~~~~~r~~~s~~G~V~~ 954 (1201)
| -+..|.|.+. ++-+|=+-..+.+||-+.-|++
T Consensus 81 p~V~i~F~i~d~~~~HYHVPLLlSP~~YST~~~v~~ 116 (119)
T 1oo2_A 81 EVAEVVFDAHPEGHGHYTLALLLSPFSYTTTAVVSS 116 (119)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEETTEEEEEEEECC
T ss_pred ceEEEEEEECCCCCCCEEEeEEecCCcceeeEEecc
Confidence 2 3466889874 7888999999999998776654
No 110
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=88.92 E-value=2.3 Score=44.19 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=34.2
Q ss_pred eeeeEEeeCCCcceeeEEEEEcCcccccccCCceeeeeee-ecceeEEeeeeee
Q 000982 327 SVGGRVVDENDMGVEGVKILVDGHERSITDRDGYYKLDQV-TSNRYTIEAVKVH 379 (1201)
Q Consensus 327 sv~G~V~d~~G~pl~Ga~V~l~G~~~~~TDadG~y~~~~L-~pG~Y~I~~~~~~ 379 (1201)
.|++...|.+| .|..+.|++||..+.+ +..+.|.+.-. .+|.|+|++++-.
T Consensus 112 tl~~~AsD~~g-~V~~Ve~~~dg~~v~t-~t~~~y~~~~~~~~G~~tl~a~A~D 163 (190)
T 3pdd_A 112 KITATASDSDG-KISRVDFLVDGEVIGS-DREAPYEYEWKAVEGNHEISVIAYD 163 (190)
T ss_dssp EEEEEEECSSS-CEEEEEEEETTEEEEE-ECSSSEEEEEECCSEEEEEEEEEEE
T ss_pred EEEEEEECCCC-cEEEEEEEECCEEEec-ccCCCEEEEEecCCeeEEEEEEEEE
Confidence 45555556544 5999999999987743 33444444322 7899999988743
No 111
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=88.62 E-value=0.15 Score=50.83 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=42.2
Q ss_pred EeeeEeeeecCccccccCCCCcceeEEEecc--CC--CeeeeeeecCccceee----eeecCcceeeeccCC
Q 000982 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSH--SG--DLISSVITSSEGSYLF----KNIIPGKYKLRASHP 191 (1201)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~--~g--~~i~sttTd~~G~f~F----~~l~PG~Y~l~~~~~ 191 (1201)
|+=.|++.. +|.|.+|+.|+|+.. ++ +.+.+.+||+|||..- ..+.+|.|+|.+.-.
T Consensus 32 LTtHVLDt~-------~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg 96 (147)
T 4ank_A 32 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTK 96 (147)
T ss_dssp EEEEEEETT-------TTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHH
T ss_pred eEEEEEeCC-------CCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHH
Confidence 566777642 579999999999754 33 4578999999999752 235678999987543
No 112
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=88.08 E-value=0.53 Score=42.00 Aligned_cols=51 Identities=16% Similarity=0.106 Sum_probs=39.7
Q ss_pred cCCCCcceeEEE--eccCC-CeeeeeeecCccceeeeeecCcceeeeccCCCcEE
Q 000982 144 KGGGPSNVNVEL--LSHSG-DLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSV 195 (1201)
Q Consensus 144 ~g~plaGv~V~L--~~~~g-~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~ 195 (1201)
+|.|++||.|++ ++-.- -.++...||++|.++|. .--|+-.|.+.+.||.-
T Consensus 11 ~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 11 EGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp TSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred CCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 379999987765 44321 23678899999999999 77789999999999853
No 113
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=86.66 E-value=6.3 Score=48.60 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=49.4
Q ss_pred eeEEEeccCCCeee-eeeecCccceeee-----eecCcceeeeccCCC-----c--EEEE----eeeeEEEeeccCceee
Q 000982 151 VNVELLSHSGDLIS-SVITSSEGSYLFK-----NIIPGKYKLRASHPN-----L--SVEV----RGSTEVELGFENGEVD 213 (1201)
Q Consensus 151 v~V~L~~~~g~~i~-sttTd~~G~f~F~-----~l~PG~Y~l~~~~~g-----~--~~~~----~~~~~V~v~~~~~~v~ 213 (1201)
++|.+.+.+|..+. ...+..+|.|.++ +.++|.|+|.+...+ + .+.+ .+..+|.+......+.
T Consensus 155 ~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~s~~F~VeeyvlP~feV~i~~~~~~~~ 234 (656)
T 4fxk_A 155 ITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYIL 234 (656)
T ss_dssp EEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESSCTTCCCCEEEEECCCCCCSEEEEEEESSSSCC
T ss_pred ceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcCCCceeEEEEEEEEEEecCcEEEEEecCcceee
Confidence 67888899996554 3345567888765 235699999885321 1 2332 2445555543321110
Q ss_pred eeEeecCcccceEEEee---cCceEE-EEEEEE
Q 000982 214 DIFFAPGYEIRGLVVAQ---GNPILG-VHIYLY 242 (1201)
Q Consensus 214 ~~l~i~G~~vsG~V~~~---g~Pl~G-a~V~L~ 242 (1201)
.....+-.+..+|... |.|+.| +.+...
T Consensus 235 -~~~~~~~~~~v~v~a~Y~~G~PV~G~~~v~~~ 266 (656)
T 4fxk_A 235 -TVPGHLDEMQLDIQARYIYGKPVQGVAYVRFG 266 (656)
T ss_dssp -EETTEECCCEEEEEEEETTCCCCCSEEEEEEE
T ss_pred -eccCCCCeEEEEEEEEEccCccEeeEEEEEEE
Confidence 0001123455566543 999987 555443
No 114
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=86.59 E-value=14 Score=38.28 Aligned_cols=128 Identities=16% Similarity=0.205 Sum_probs=74.3
Q ss_pred cceeEEEEEeccccccccc-ccCC-CceEEEEeeec---c---eEEEEEcCCCCCCcCCCceeEEEcCCCCCCCcceeEE
Q 000982 51 YSHVTVELRTLDGLVKEST-QCAP-NGYYFIPVYDK---G---SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFR 122 (1201)
Q Consensus 51 lsgv~V~L~~~~G~~~~~t-~t~~-nG~y~i~~l~~---G---~Y~l~~~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf~ 122 (1201)
-+.|+|+|+- +|..+.+- .+++ +-.|.|..|+. | .|+|+....+||.- .+++ .+|.-.
T Consensus 22 p~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lp~y~~G~~i~YtV~E~~v~gY~~-------~i~G------~~ITNt 87 (187)
T 1d2o_A 22 PEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTT-------DING------TTITNK 87 (187)
T ss_dssp CSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEE-------EEET------TEEEEE
T ss_pred CceEEEEEEE-CCeEeeeEEEecCCCcEEEECCCcccCCCCEEEEEEEeCCCCCcEE-------eecc------EEEEcc
Confidence 3579999984 66554332 3344 44677666553 5 59998888778752 2333 123222
Q ss_pred Ee--eeEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeee---eecCccceeeeeecC---c---ceeeecc--
Q 000982 123 FT--GFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSV---ITSSEGSYLFKNIIP---G---KYKLRAS-- 189 (1201)
Q Consensus 123 ~~--g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~st---tTd~~G~f~F~~l~P---G---~Y~l~~~-- 189 (1201)
.. -..|+++-.-.+++ + ..+..+.-++|+|+. +|..+... ..+.+..|.|.+|+- | .|+|.+.
T Consensus 88 ~~P~~~~i~V~K~W~d~~--~-~~~~rP~~I~v~L~~-dG~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~E~~~ 163 (187)
T 1d2o_A 88 YTPGETSATVTKNWDDNN--N-QDGKRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTK 163 (187)
T ss_dssp ECTTEEEEEEEEEEESST--T-SSSCCCSCEEEEEEE-TTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSC
T ss_pred ccCccccceeeEEEcCCC--C-ccCCCCceEEEEEEe-CCeEeceEEEEecCCceEEEEcCCCccCCCCEEEEEEEEeCc
Confidence 21 12344433222121 1 123456789999987 56544322 234567899999986 4 6999874
Q ss_pred CCCcEEE
Q 000982 190 HPNLSVE 196 (1201)
Q Consensus 190 ~~g~~~~ 196 (1201)
.+||...
T Consensus 164 ~~GY~~~ 170 (187)
T 1d2o_A 164 VKGYTTH 170 (187)
T ss_dssp CTTEEEE
T ss_pred CCCcEEE
Confidence 5788755
No 115
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=86.41 E-value=3.6 Score=44.25 Aligned_cols=47 Identities=28% Similarity=0.373 Sum_probs=32.2
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....++...+.......-.|.|.||.||+.|.|++.+..
T Consensus 223 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 269 (283)
T 1tdq_A 223 PIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAER 269 (283)
T ss_dssp CCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEE
T ss_pred cccEEEEEEEcCCCCeeEEEeCCCccEEEECCCCCCCEEEEEEEEEc
Confidence 45666666654433333333444556799999999999999999753
No 116
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=85.89 E-value=0.37 Score=47.32 Aligned_cols=97 Identities=21% Similarity=0.349 Sum_probs=68.0
Q ss_pred ccccccccEEEEEEecCCCCCCCceeEEEeecCC----Ccc--cCccccCCceee--e--ccccCccccchhhhhhc---
Q 000982 852 FSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD----GYR--NNSVSWAGGSFH--F--DNLFPGNFYLRPLLKEY--- 918 (1201)
Q Consensus 852 f~~~~l~~i~v~v~~~~~~~~pL~~vl~slsg~~----~~r--~n~~T~~~G~~~--f--~~L~PG~Y~~~~~~key--- 918 (1201)
+.+...+.|+.+|.|. ..|.|-+||.+.|...+ .+. ....||+||++. + ..|.||.|-|+.-..+|
T Consensus 20 ~~~~~~~~LTtHVLDt-~~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Yf~~ 98 (138)
T 3iwv_A 20 MSATLLSPLSTHVLNI-AQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDA 98 (138)
T ss_dssp ------CCEECCEEET-TTTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHHHHH
T ss_pred cccCCCCCceEEEeec-CCccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHHHHh
Confidence 4556678899999998 56999999999886432 222 246899999985 2 35889999988765555
Q ss_pred ----ccCC-CceeEecCC-CcceeEEEEEEEEEEeee
Q 000982 919 ----AFSP-PAQAIELGS-GESREVIFQATRVAYSAT 949 (1201)
Q Consensus 919 ----~~~p-~~~~i~v~~-G~~~~v~~~~~r~~~s~~ 949 (1201)
.|=| -+..|.|.+ +|.-+|-+-..+.+||.|
T Consensus 99 ~g~~~F~p~V~V~F~i~d~~~HYHVPLLlSP~gYSTY 135 (138)
T 3iwv_A 99 LGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTT 135 (138)
T ss_dssp TTCCCSCSCEEEEEEECCTTSCEECCEEEETTEEEEE
T ss_pred cCCCccceeeEEEEEECCCCCCeEEeEEecCCcceee
Confidence 2444 456788987 577788888888888865
No 117
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=85.72 E-value=0.44 Score=47.44 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.7
Q ss_pred eeeeEEeeC-CCcceeeEEEEE-----cCcc--c--ccccCCceeee----eeeecceeEEeeeeeee
Q 000982 327 SVGGRVVDE-NDMGVEGVKILV-----DGHE--R--SITDRDGYYKL----DQVTSNRYTIEAVKVHY 380 (1201)
Q Consensus 327 sv~G~V~d~-~G~pl~Ga~V~l-----~G~~--~--~~TDadG~y~~----~~L~pG~Y~I~~~~~~y 380 (1201)
.|+-.|+|. .|.|.+|+.|.| +|+. + ++||+||+..- +.+.+|.|+|.+....|
T Consensus 31 PLTtHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 31 PLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp CEEEEEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred CeEEEEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 366789997 899999999998 2332 2 58999999752 24568999999887776
No 118
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=85.12 E-value=14 Score=37.60 Aligned_cols=51 Identities=22% Similarity=0.353 Sum_probs=34.2
Q ss_pred ecCCCCCceeEEEeecccceeeeeee-----cCCCceEeecccCCceEEEEEEEec
Q 000982 955 LSGQPKDGVSVEARSESKGYYEETVT-----DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 955 ~~g~p~~gv~v~~~~~~~~~~~~~~T-----d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.+|.++.+-.|+....+......... ..+-.|.|.||.|+..|.+++.+..
T Consensus 34 ~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 89 (209)
T 2vkw_A 34 TGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 89 (209)
T ss_dssp CCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEE
T ss_pred CCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEc
Confidence 46778888888876443211111111 1244899999999999999999753
No 119
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=84.72 E-value=5.2 Score=36.25 Aligned_cols=61 Identities=25% Similarity=0.370 Sum_probs=38.8
Q ss_pred CCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEe
Q 000982 959 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKV 1024 (1201)
Q Consensus 959 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~ 1024 (1201)
++.+-.|+....+ ....+....-..-.|.|.||.||+.|.|++.+... ..++.|-......
T Consensus 28 ~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~-----~g~S~p~~~~~~~ 90 (98)
T 3tes_A 28 AFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKG-----GHRSNPLSAEFTT 90 (98)
T ss_dssp SCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET-----TEEBCCEEEEEEC
T ss_pred ccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeC-----CcccCCEEEEEEc
Confidence 4555556555432 22233334445668999999999999999997532 3455666665553
No 120
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=84.62 E-value=8.7 Score=40.33 Aligned_cols=134 Identities=18% Similarity=0.246 Sum_probs=76.0
Q ss_pred eeEEEEEecccccccccccCC-CceEEE--EeeecceEEEEEcCCCCCCcCCCceeEEEcCCCCCCCcceeEEEeeeEEe
Q 000982 53 HVTVELRTLDGLVKESTQCAP-NGYYFI--PVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFTGFTLL 129 (1201)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~-nG~y~i--~~l~~G~Y~l~~~~P~G~~~~p~~~~v~Vd~~~~s~~~dinf~~~g~~Is 129 (1201)
.+++.+..++|..+.....+. ||.|.+ -...+|.|.|.+.-- |....-....+.|... |. ..-......-|.|.
T Consensus 45 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~-g~~i~gSPf~v~v~~~-~~-~~~~~~~~~~f~V~ 121 (212)
T 1qfh_A 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR-GNPIKNMPIDVKCIEG-AN-GEDSSFGSFTFTVA 121 (212)
T ss_dssp CEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEET-TEECBTCSEEEEEECC-CC-GGGCEEEEEEEEEE
T ss_pred eEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEEC-CEecCCCcceEEEccC-CC-CCceEEEEEEEEEE
Confidence 578888888886555555554 898883 334789999988753 2334333455566442 11 01112222222221
Q ss_pred eeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeee--eecCcceeeeccCCCcEE
Q 000982 130 GRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (1201)
Q Consensus 130 G~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~ 195 (1201)
- .+..|+ .+ ..+.....+++...+|......+...+|.|.+. ...+|.|.|.+...|..+
T Consensus 122 ~--~D~~G~-~~---~~G~~~l~v~i~~p~g~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~~I 183 (212)
T 1qfh_A 122 A--KNKKGE-VK---TYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHI 183 (212)
T ss_dssp C--BCTTSS-BC---SSCCCCEEEEEEECCSEEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTEEC
T ss_pred E--eccCCC-Ee---ecCCCcEEEEEECCCCceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCEEC
Confidence 1 111111 01 245566888888877733334567789977654 456789999887766654
No 121
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=84.51 E-value=5.2 Score=40.10 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=32.1
Q ss_pred CCCceeEEEeecc-cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+ ............-.|.|.||.||+.|.+++.+..
T Consensus 121 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 168 (186)
T 1qr4_A 121 RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVK 168 (186)
T ss_dssp CCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred cccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEc
Confidence 4666666665433 2223334444667899999999999999999753
No 122
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=84.42 E-value=30 Score=37.09 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=65.3
Q ss_pred CCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCcc---ccce
Q 000982 959 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDI---KGLD 1033 (1201)
Q Consensus 959 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~---~~~~ 1033 (1201)
++.+-.|+....+ ........+...-.|.|.||.||+.|.+++.+....| .+.|....+. ..++. .++.
T Consensus 47 ~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~s~~s~~~~~-t~~~~~~P~~l~ 120 (290)
T 3r8q_A 47 QLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTL-----TSRPAQGVVT-TLENVSPPRRAR 120 (290)
T ss_dssp CCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEETTE-----ECCCEEEEEE-CCCCCCCCEEEE
T ss_pred CeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCC-----CCCCcceeEe-cCCCCCCCceeE
Confidence 5666666665432 2233334445567899999999999999999753322 1222222222 22222 1222
Q ss_pred EEEeeccceeEEEEEeeccchhccccceEEEEeccCCccceeEEEeeccccceeecCCCCc-ceeeEecc
Q 000982 1034 FLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1034 f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~~~~~~~~~~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
....... .|...=... +.......|..+..+......... -.....|.+..|.++ .|.+++..
T Consensus 121 ~~~~~~~---sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A 184 (290)
T 3r8q_A 121 VTDATET---TITISWRTK--TETITGFQVDAVPANGQTPIQRTI-KPDVRSYTITGLQPGTDYKIYLYT 184 (290)
T ss_dssp EEEECSS---CEEEEEECC--SCCCCEEEEEEEESSSCCCEEEEE-CTTCSEEEECSCCTTCEEEEEEEE
T ss_pred EEEcCCC---eEEEEEeCC--CCcccEEEEEEEECCCCcceEEec-CCCccEEEECCCCCCCEEEEEEEE
Confidence 2211111 111111111 112234455554433332222211 223456899999998 68887764
No 123
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=83.87 E-value=29 Score=35.33 Aligned_cols=48 Identities=19% Similarity=0.190 Sum_probs=32.9
Q ss_pred CCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 958 QPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 958 ~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.++.+-.|+....+ .........-..-.|.|.||.||+.|.|++.+..
T Consensus 140 ~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 140 IDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp CCCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEec
Confidence 36677777766432 1122333344567899999999999999999753
No 124
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=83.54 E-value=1.3 Score=48.84 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=43.1
Q ss_pred CCCCcceeEEEeccCCCeeeeeeecCccceeeeeecCcceeeeccCCCcEEE
Q 000982 145 GGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVE 196 (1201)
Q Consensus 145 g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~l~PG~Y~l~~~~~g~~~~ 196 (1201)
..-++++.|.|. ..|..+....||+.|.|.|..|++|.|+|.+.+.|| ..
T Consensus 207 ~~~~~~~~vpl~-~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~ 256 (274)
T 1ti6_B 207 GDCFEGAKVVLK-SGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK-SY 256 (274)
T ss_dssp TEECTTCEEEEE-ETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE-EE
T ss_pred cccccCCEEEEE-cCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC-Cc
Confidence 356677788888 447778899999999999999999999999999999 55
No 125
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=82.64 E-value=0.94 Score=43.57 Aligned_cols=91 Identities=13% Similarity=0.259 Sum_probs=65.2
Q ss_pred cccEEEEEEecCCCCCCCceeEEEeecCCCcc--cCccccCCceee-----eccccCccccchhhhhhc-----------
Q 000982 857 LSQISVRIYSKDDAGEPIPSVLLSLSGDDGYR--NNSVSWAGGSFH-----FDNLFPGNFYLRPLLKEY----------- 918 (1201)
Q Consensus 857 l~~i~v~v~~~~~~~~pL~~vl~slsg~~~~r--~n~~T~~~G~~~-----f~~L~PG~Y~~~~~~key----------- 918 (1201)
.+.|+.+|.|. ..|.|-+|+.+.|..-+ .+ ...+||+||++. =..+.+|.|-|+.-..+|
T Consensus 8 m~~lstHVLDt-~~G~PAagv~V~L~~~~-~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg~Yf~~~~~~~~~~ 85 (121)
T 2h0e_A 8 MGKLTTHILDL-TCGKPAANVKIGLKRLG-ESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAGDYFASKNMNAADQ 85 (121)
T ss_dssp CCEEECCEEET-TTTEECTTCEEEEEETT-SCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHHHHHHTTC--CCSS
T ss_pred cCCeeEEEecC-CCcCCCCCCEEEEEECC-ceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhHHhHhhccccCCCC
Confidence 35688899987 56999999999998754 22 247899999982 246889999877554444
Q ss_pred ccCC-CceeEecCC-CcceeEEEEEEEEEEeee
Q 000982 919 AFSP-PAQAIELGS-GESREVIFQATRVAYSAT 949 (1201)
Q Consensus 919 ~~~p-~~~~i~v~~-G~~~~v~~~~~r~~~s~~ 949 (1201)
.|=| -+..|.|.+ +++-+|-+-..+.+||.|
T Consensus 86 ~F~p~V~i~F~i~d~~~HYHVPLLlSP~gYSTY 118 (121)
T 2h0e_A 86 PFLTIVTVRFQLADPDAHYHIPLLLSPFGYQVY 118 (121)
T ss_dssp CSCSSEEEEEEECCTTSEEECCEEEETTEEEEC
T ss_pred CCcceEEEEEEECCCCCCeEEeEEecCCccccc
Confidence 2222 345578876 477777777777777754
No 126
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=81.67 E-value=14 Score=38.18 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=34.9
Q ss_pred CCCcceeEEEeccCCCeee-eeeecCcccee--eeeecCcceeeeccCCCcEE
Q 000982 146 GGPSNVNVELLSHSGDLIS-SVITSSEGSYL--FKNIIPGKYKLRASHPNLSV 195 (1201)
Q Consensus 146 ~plaGv~V~L~~~~g~~i~-sttTd~~G~f~--F~~l~PG~Y~l~~~~~g~~~ 195 (1201)
.....+++++...+|..+. ..+-..+|.|. |..-.+|.|.|.+...|..+
T Consensus 28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g~~V 80 (191)
T 2k7q_A 28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHV 80 (191)
T ss_dssp CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETTEEC
T ss_pred CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECCEEC
Confidence 4556688888888885443 33446788886 55556799999988777554
No 127
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=81.03 E-value=41 Score=36.95 Aligned_cols=110 Identities=21% Similarity=0.314 Sum_probs=47.9
Q ss_pred eeeeecCCcceeeceec--ccceeeeeeccccceEEeeCCCceeeEEeeeeeeccceeEEeeeee----ee----EEeeC
Q 000982 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSV----GG----RVVDE 335 (1201)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--pG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sv----~G----~V~d~ 335 (1201)
+...-..+|.|.+.-+| +|.|.|...+.+.+ +..+...+.|.......+....+.|--+ .| -.+++
T Consensus 147 ~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~g~~----i~gsPf~~~V~~~~~~d~~k~~~~G~GL~~~~~g~~~~F~I~~ 222 (288)
T 2j3s_A 147 AEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQH----VPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWT 222 (288)
T ss_dssp EBC-------CCCBCCCCSCEEEEEEEEETTEE----CTTCSEEEEESCCCCCCGGGCEEESGGGTCEETTBCEEEEEEC
T ss_pred eEEEeCCCCEEEEEEecccceeeEEEEEECCee----CCCCCeEEEEeccCCCCcceEEEEcCCccceEeCCceEEEEEe
Confidence 44444578888877666 68999998776543 2223333333221000000011100000 00 01222
Q ss_pred CCcceeeEEEEEcCccc---c-cccCCceeeeeeee--cceeEEeeeeee
Q 000982 336 NDMGVEGVKILVDGHER---S-ITDRDGYYKLDQVT--SNRYTIEAVKVH 379 (1201)
Q Consensus 336 ~G~pl~Ga~V~l~G~~~---~-~TDadG~y~~~~L~--pG~Y~I~~~~~~ 379 (1201)
.+.+-.+..|.+.|... . .-..||.|.+.-.+ ||.|.|.+.-.+
T Consensus 223 ~dag~g~l~v~v~gp~~~~~~~~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 223 REAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp CBSSSEEEEEEEEESSCEEEEEEECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred CCCCCCceEEEEeCCCCcceeEEECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 22334455566644322 1 33477888776553 588888876543
No 128
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=80.63 E-value=3.3 Score=39.30 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=36.4
Q ss_pred cCCCCCceeEEEeecc-cc-eeeeeeecCCCceEeecccCCceEEEEEEEe
Q 000982 956 SGQPKDGVSVEARSES-KG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~-~~-~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
+|.|+.+-.|+-+..+ .. ..+....-..-.|.|.||.||+.|.+++.+.
T Consensus 34 ggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 34 GGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp SSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 6789999999887543 11 2223334455689999999999999999975
No 129
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=79.30 E-value=11 Score=38.90 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=68.1
Q ss_pred cceeEEEEEecccccccccccC-CCceEEEE--eeecceEEEEEcCCCCCCcCCCceeEEEcC---CCCCC-CcceeEEE
Q 000982 51 YSHVTVELRTLDGLVKESTQCA-PNGYYFIP--VYDKGSFVIKVNGPEGWSWNPDKVAVTVDD---TGCNG-NEDINFRF 123 (1201)
Q Consensus 51 lsgv~V~L~~~~G~~~~~t~t~-~nG~y~i~--~l~~G~Y~l~~~~P~G~~~~p~~~~v~Vd~---~~~s~-~~dinf~~ 123 (1201)
-..+++.+.+++|....-..++ .+|.|.+. --.+|.|.|.+.-- |....-....+.|.. ..|.. +..+.-..
T Consensus 33 ~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~-g~~i~gSPf~~~V~~~d~~~~~~~G~GL~~~~ 111 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYD-NMHIPGSPLQFYVDYVNCGHVTAYGPGLTHGV 111 (188)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEET-TEECTTCSEEEEECCTTSSSCEEESSTTTEEE
T ss_pred CceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEEC-CEecCCCCEEEEecccCCcceEEeCcccccce
Confidence 3477889999999876555554 48988732 23689999977643 222322223344432 11110 00000001
Q ss_pred eeeEEeeeEeeeecCccccccCCCCcceeEEEeccCCCeeeeeeecCccceeeee--ecCcceeeeccCCCc
Q 000982 124 TGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKN--IIPGKYKLRASHPNL 193 (1201)
Q Consensus 124 ~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~i~sttTd~~G~f~F~~--l~PG~Y~l~~~~~g~ 193 (1201)
.|....=.|.. .+.+..+..|++...++..+ ...-+.||.|.+.- -.||.|.|.+...+.
T Consensus 112 vg~~~~F~V~t---------~dag~g~l~v~I~gp~~~~~-~~~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 173 (188)
T 2k7p_A 112 VNKPATFTVNT---------KDAGEGGLSLAIEGPSKAEI-SCTDNQDGTCSVSYLPVLPGDYSILVKYNEQ 173 (188)
T ss_dssp TTSCEEEEEEC---------TTCCSSCEEEEEECSSCCEE-EEEECTTSEEEEEEECCSSEEEEEEEEETTE
T ss_pred eCccEEEEEEe---------CCCCCCCeEEEEeCCCCCeE-EEEECCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence 11000001111 12345567777765554322 34567888765553 356888887765553
No 130
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=79.22 E-value=22 Score=35.88 Aligned_cols=50 Identities=18% Similarity=0.301 Sum_probs=33.0
Q ss_pred CCCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.++.+-.|+....+ ....+.......-.|.|.||.||..|.+++.+...
T Consensus 27 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 27 PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 456667666665332 11222233334568999999999999999998643
No 131
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=79.11 E-value=62 Score=33.66 Aligned_cols=107 Identities=13% Similarity=0.200 Sum_probs=57.7
Q ss_pred eeeeecCCcceeeceec--ccceeeeeeccccceEEeeCCCceeeEEeeeeeeccceeEEeeeeeeeEEeeCCCcc----
Q 000982 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMG---- 339 (1201)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--pG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sv~G~V~d~~G~p---- 339 (1201)
+..+-..||.|.+.-.| +|.|.|...+.+.+ +.-+...+.|...............|.| ...|..|++
T Consensus 60 ~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~~----i~gSPf~v~v~~~~~~~~~~~~~~~f~V--~~~D~~G~~~~~G 133 (212)
T 1qfh_A 60 AKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNP----IKNMPIDVKCIEGANGEDSSFGSFTFTV--AAKNKKGEVKTYG 133 (212)
T ss_dssp CEEEECSSSEEEEEECCCSSEEEEEEEEETTEE----CBTCSEEEEEECCCCGGGCEEEEEEEEE--ECBCTTSSBCSSC
T ss_pred eEEEECCCcEEEEEEECcCcEEEEEEEEECCEe----cCCCcceEEEccCCCCCceEEEEEEEEE--EEeccCCCEeecC
Confidence 34455678999877666 78999999776643 2223344444332100000111112222 223434432
Q ss_pred eeeEEEEE---cCccc---ccccCCceeeeeeee--cceeEEeeeeee
Q 000982 340 VEGVKILV---DGHER---SITDRDGYYKLDQVT--SNRYTIEAVKVH 379 (1201)
Q Consensus 340 l~Ga~V~l---~G~~~---~~TDadG~y~~~~L~--pG~Y~I~~~~~~ 379 (1201)
.....+.+ +| .+ .....||.|.+.-.+ +|.|.|.+.-.+
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g 180 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETT
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 23445555 34 22 246688988887664 599999887654
No 132
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=78.87 E-value=7 Score=39.08 Aligned_cols=50 Identities=18% Similarity=0.252 Sum_probs=33.9
Q ss_pred CCCCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.++.+-.|+....+.........-..-.|.|.||.||+.|.+++.+...
T Consensus 131 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~ 180 (197)
T 3lpw_A 131 GSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNE 180 (197)
T ss_dssp TSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEET
T ss_pred CCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeC
Confidence 34667777777654322222233345678999999999999999997543
No 133
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=78.74 E-value=4.1 Score=52.00 Aligned_cols=104 Identities=17% Similarity=0.103 Sum_probs=81.1
Q ss_pred ccccCCceeeeccccCcccc---chh--hhhhcccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEEeecCCCCC-cee
Q 000982 891 SVSWAGGSFHFDNLFPGNFY---LRP--LLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKD-GVS 964 (1201)
Q Consensus 891 ~~T~~~G~~~f~~L~PG~Y~---~~~--~~key~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~~~~g~p~~-gv~ 964 (1201)
..||..|...+.+|.|=+.- |-+ +..+.++.-+.+.|...+|.-..+.|...+ ...+..+++.- |+|+| |+.
T Consensus 692 ~~Td~~G~avvp~l~pY~~N~i~iD~~~Lp~dvel~~t~~~v~P~~GAvv~~~F~~~~-g~~~l~~l~~~-G~~lPfGa~ 769 (843)
T 3rfz_B 692 VRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRAEFKARV-GIKLLMTLTHN-NKPLPFGAM 769 (843)
T ss_dssp CBCCTTSEEEESCCCTTSCEEEEBCGGGSCTTEEESCSEEEECBCTTCEEEEECCEEE-SEEEEEEEEET-TEECCTTCE
T ss_pred ceECCCCeEEECCCCcccccEEEEcCCCCCCCEEEeccEEEEEECCCCEEEEEEEEEe-eEEEEEEEeeC-CCCCCCceE
Confidence 56999999999999985543 333 346888888999999999999888887654 56678888887 99998 887
Q ss_pred EEEeecccceeeeeeecCCCceEeecccCCceEEEEEE
Q 000982 965 VEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVV 1002 (1201)
Q Consensus 965 v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~ 1002 (1201)
|. +.++ ........+|++.|+||.|+.. ++|+
T Consensus 770 V~--~~~~--~~~giVg~~G~vyl~gl~~~~~--L~V~ 801 (843)
T 3rfz_B 770 VT--SESS--QSSGIVADNGQVYLSGMPLAGK--VQVK 801 (843)
T ss_dssp EE--ESSS--SCEEECCGGGEEEEEEECSEEE--EEEE
T ss_pred EE--cCCC--cEEEEEcCCCEEEEEcCCCCcE--EEEE
Confidence 75 3322 2467899999999999988864 5555
No 134
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=78.00 E-value=85 Score=34.31 Aligned_cols=49 Identities=12% Similarity=0.195 Sum_probs=25.5
Q ss_pred CCcceeEEEeccCCCeee-eeeecCccceeee--eecCcceeeeccCCCcEE
Q 000982 147 GPSNVNVELLSHSGDLIS-SVITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (1201)
Q Consensus 147 plaGv~V~L~~~~g~~i~-sttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~ 195 (1201)
.....++++.+.+|.... ...-..+|.|.+. ...+|.|.|.+...|..+
T Consensus 129 ~~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~g~~i 180 (288)
T 2j3s_A 129 SIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHV 180 (288)
T ss_dssp -CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEETTEEC
T ss_pred CcCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEECCeeC
Confidence 344566777777775443 2333477777544 445688998877665543
No 135
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=77.83 E-value=2.3 Score=46.91 Aligned_cols=45 Identities=27% Similarity=0.365 Sum_probs=35.7
Q ss_pred CCcceeeEEEEE--cCccc--ccccCCceeeeeeeecceeEEeeeeeee
Q 000982 336 NDMGVEGVKILV--DGHER--SITDRDGYYKLDQVTSNRYTIEAVKVHY 380 (1201)
Q Consensus 336 ~G~pl~Ga~V~l--~G~~~--~~TDadG~y~~~~L~pG~Y~I~~~~~~y 380 (1201)
++.-++++.|.| .|..+ ..||+.|.|.|..|++|.|+|.+.+++|
T Consensus 206 ~~~~~~~~~vpl~~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~ 254 (274)
T 1ti6_B 206 QGDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK 254 (274)
T ss_dssp TTEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE
T ss_pred ccccccCCEEEEEcCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC
Confidence 344555666666 45544 4899999999999999999999999987
No 136
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=77.33 E-value=24 Score=36.25 Aligned_cols=46 Identities=13% Similarity=0.248 Sum_probs=31.4
Q ss_pred ceeEEEeccCCCeeee-eeecCccceeee--eecCcceeeeccCCCcEE
Q 000982 150 NVNVELLSHSGDLISS-VITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (1201)
Q Consensus 150 Gv~V~L~~~~g~~i~s-ttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~ 195 (1201)
.+++.+.+.+|..... .+-+.+|.|.+. .-.+|.|+|.+...+..+
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g~~i 83 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHI 83 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETTEEC
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECCEec
Confidence 4667777888865443 344688988665 446789999987766543
No 137
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=77.00 E-value=45 Score=45.15 Aligned_cols=215 Identities=15% Similarity=0.151 Sum_probs=110.0
Q ss_pred eeEEecccCCCCCcc-EEEEEEecCccccccccceEEE--EeeeCCCc----ceeccccccCccceeeecCC-ccceee-
Q 000982 776 GLYTEGSVSPPLSGV-NIRIIAAEDSQIASLKKGHLAL--ETSTGADG----SFIGGPLYDDITYNVEASKP-GYYLRQ- 846 (1201)
Q Consensus 776 G~~i~G~v~p~l~gv-~i~i~~~~~~~~~~~~~g~~~~--~~~Td~~G----~f~~~~L~~~~~y~i~a~k~-gy~~~~- 846 (1201)
.+.+...-.|.-..+ .|+|.+.++. .+. ...++..| +|.+.+...-..|.|.+... |-....
T Consensus 125 v~~~~~~~~p~~~~~~~v~i~dp~g~---------~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~ 195 (1451)
T 4acq_A 125 VVSMDENFHPLNELIPLVYIQDPKGN---------RIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHP 195 (1451)
T ss_dssp EEEECTTCCBCCCEEEEEEEECTTSC---------EEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTCCEEEEE
T ss_pred EEEECCCCcCccCceeEEEEECCCCC---------EEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecCCceEEEE
Confidence 345555556664444 4677665543 332 35677777 45555666556899998764 221111
Q ss_pred ---ec---C---Ccccc-----cccccEEEEEEecCCCCCCCceeEE-EeecC-CCcc-----c--------CccccCCc
Q 000982 847 ---VG---P---NSFSC-----QKLSQISVRIYSKDDAGEPIPSVLL-SLSGD-DGYR-----N--------NSVSWAGG 897 (1201)
Q Consensus 847 ---~~---~---~~f~~-----~~l~~i~v~v~~~~~~~~pL~~vl~-slsg~-~~~r-----~--------n~~T~~~G 897 (1201)
.+ | ..+.. ..-..+.++|...=.-|.|.+|... .+-.. ..|+ . ...+|.+|
T Consensus 196 F~V~eYvlP~FeV~v~~~~~~~~~~~~~~~~i~a~Y~~G~pV~G~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 275 (1451)
T 4acq_A 196 FTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDASDCHGEDSQAFCEKFSGQLNSHG 275 (1451)
T ss_dssp EEECCCCCCSCEEEEECCSEEESSCSCCEEEEEEECSSSCBCCCEEEECCBCCCTTTTTSCSSCCCCCBCCEEEECCSSC
T ss_pred EEEeeeeCCcEEEEEeCCceEeecCCEEEEEEEEEEcCCCEEcceEEEEEEEeccccccccccccccccceeeEEEcCCe
Confidence 11 1 11111 1223466676665566999999533 22111 1221 0 13467778
Q ss_pred eeeeccccCccccchhhhhhcccCCCceeEecCC---Ccc-------------eeEEEEEEEEE------EeeeeeEEee
Q 000982 898 SFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGS---GES-------------REVIFQATRVA------YSATGTITLL 955 (1201)
Q Consensus 898 ~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~~---G~~-------------~~v~~~~~r~~------~s~~G~V~~~ 955 (1201)
.+.|. +.--.+... ...|. ..=....+|.| |.. ..+.|..++.- |.+.=+|+..
T Consensus 276 ~~~~~-~~~~~~~~~--~~~~~-~~l~V~atVtE~gtg~~~~~~~~i~i~~s~~~i~f~~t~~~fkPG~pf~~~v~v~~~ 351 (1451)
T 4acq_A 276 CFYQQ-VKTKVFQLK--RKEYE-MKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFVKVDSHFRQGIPFFGQVRLVDG 351 (1451)
T ss_dssp CCEEE-CCGGGSCSS--SSCCB-CBCEEEEECSSSCCSCCEEECCCCEEECCCSEEEEEEECSEECSSSCCEEEEEEECT
T ss_pred EEEEE-EEHHHhcch--hhccC-eEEEEEEEEEEccceEEEeceEEEEEEeeeeEEEEecCCCcccCCCcEEEEEEEEcC
Confidence 77664 110011000 00110 00011122332 111 24555555443 3355566789
Q ss_pred cCCCCCceeEEEeecccceeeeeeecCCCceEeecccC---CceEEEEEEE
Q 000982 956 SGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHP---DTTYVIKVVK 1003 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~p---g~~y~v~~~~ 1003 (1201)
+|.|++++.|++.-....+..+.+||+||...+.=-.| ...+.|+++.
T Consensus 352 dg~P~~~~~v~v~~~~~~~~~~~~t~~~G~a~f~i~~~~~~~~~l~i~~~~ 402 (1451)
T 4acq_A 352 KGVPIPNKVIFIRGNEANYYSNATTDEHGLVQFSINTTNVMGTSLTVRVNY 402 (1451)
T ss_dssp TSCBCCSCBCEEEETTTCCCCCCBCCTTSEEEEECCCCSSSCEEEEEESCC
T ss_pred CCCcCCCceEEEEecccceeeeeEeCCCCcEEEEEeCCCCCCcEEEEEEEE
Confidence 99999999998874433344678999999766553233 2457777664
No 138
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=75.32 E-value=72 Score=33.87 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=30.1
Q ss_pred CCCceeEEEeecccc----e-eeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKG----Y-YEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~----~-~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+.. . .........-.|.+.||.||+.|.|++.+..
T Consensus 127 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n 178 (290)
T 3l5i_A 127 SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVY 178 (290)
T ss_dssp CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEe
Confidence 566666665533211 1 1122334455788899999999999999753
No 139
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=75.00 E-value=56 Score=32.15 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=35.6
Q ss_pred ecCCCCCceeEEEeecc-cceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 955 LSGQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 955 ~~g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.+|.++.+-.|+....+ ............-.|.|.+|.|+..|.+++.+...
T Consensus 32 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~ 84 (197)
T 3lpw_A 32 DGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENE 84 (197)
T ss_dssp CTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEET
T ss_pred CCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcC
Confidence 34556777777765443 22333333456678999999999999999997543
No 140
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=74.98 E-value=29 Score=35.19 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=58.2
Q ss_pred CceeeeccccCcccc-ch--hhhhhcccCCCc--eeEecCCC----cceeEEEEEEE-EEEeeeeeEEee--cCCCCCce
Q 000982 896 GGSFHFDNLFPGNFY-LR--PLLKEYAFSPPA--QAIELGSG----ESREVIFQATR-VAYSATGTITLL--SGQPKDGV 963 (1201)
Q Consensus 896 ~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~--~~i~v~~G----~~~~v~~~~~r-~~~s~~G~V~~~--~g~p~~gv 963 (1201)
.-.+.+.+|.|+.-| ++ +.- ..-..+.+ ..+...++ .-..+.+.... ...++.=+=... .+.++.+-
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n-~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y 141 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTK-GRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGY 141 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEE-TTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEE
T ss_pred ceEEEecCcCCCCEEEEEEEEEc-CCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEE
Confidence 457889999999755 44 322 11122322 23333332 22334443331 112111111111 12367777
Q ss_pred eEEEeecccc----eeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 964 SVEARSESKG----YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 964 ~v~~~~~~~~----~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.|+....+.. ..........-.|.|.||.||..|.|++.+...
T Consensus 142 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 188 (211)
T 3p4l_A 142 IIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNS 188 (211)
T ss_dssp EEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEET
T ss_pred EEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcC
Confidence 7776644321 123344556678999999999999999997543
No 141
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=74.18 E-value=8.5 Score=47.75 Aligned_cols=50 Identities=22% Similarity=0.202 Sum_probs=35.9
Q ss_pred eEEeeCCC-cceeeEEEEEcCc---c-cccccCCceeeeeeeecceeEEeeeeee
Q 000982 330 GRVVDEND-MGVEGVKILVDGH---E-RSITDRDGYYKLDQVTSNRYTIEAVKVH 379 (1201)
Q Consensus 330 G~V~d~~G-~pl~Ga~V~l~G~---~-~~~TDadG~y~~~~L~pG~Y~I~~~~~~ 379 (1201)
.+|.|..| -+++.+.|.|.+. . ...|+.||...|.++.||+|+|.+..+.
T Consensus 452 v~vtd~~~~~~~~~~~v~l~~~~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~ 506 (671)
T 1r6v_A 452 VVVTDAKGNFGVPTVFVSMMRDNGSCYYAKTGPDGIARFPHIDSGTYDIFVGGPD 506 (671)
T ss_dssp EEEECTTSCSBCTTEEEEEECSSSCCEEEECCTTSEEEEEEEECEEEEEEEEEEC
T ss_pred EEEecCCCCcCcceeEEEEecCCCceEecccCCCCceeeeccCceEEEEEEeccc
Confidence 35666633 3466677777332 2 2579999999999999999999887654
No 142
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=74.08 E-value=86 Score=38.46 Aligned_cols=55 Identities=24% Similarity=0.199 Sum_probs=38.6
Q ss_pred EeeeeeEEeecCCCCCceeEEEeecccceeeeeeecCCCceEeecccC--CceEEEEEEEe
Q 000982 946 YSATGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHP--DTTYVIKVVKK 1004 (1201)
Q Consensus 946 ~s~~G~V~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~p--g~~y~v~~~~~ 1004 (1201)
|.+.=+|+..+|.|++++.|++...+ .+.+||+||...+.==.| ...+.|+++..
T Consensus 338 ~~~~v~v~~~dg~P~~~~~V~v~~~~----~~~~td~~G~a~f~i~t~~~~~~l~i~~~~~ 394 (627)
T 3hrz_A 338 YELTVYVTNPDGSPAAHVPVVSEAFH----SMGTTLSDGTAKLILNIPLNAQSLPITVRTN 394 (627)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEGGGT----EEEECCTTSEEEEEECCCTTCSEEEEEEEEC
T ss_pred EEEEEEEECCCCCcCCCceEEEEcCc----ceeEECCCCeEEEEEECCCCCcEEEEEEEeC
Confidence 44555667889999999999876322 568999999866553223 25678888764
No 143
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=73.05 E-value=48 Score=34.18 Aligned_cols=122 Identities=18% Similarity=0.331 Sum_probs=68.9
Q ss_pred CCCCcceeEEEeccCCCeeee--eeecCccceeeeeecC---c---ceeeecc-CCCcEEEEeeeeEEEeeccCceeeee
Q 000982 145 GGGPSNVNVELLSHSGDLISS--VITSSEGSYLFKNIIP---G---KYKLRAS-HPNLSVEVRGSTEVELGFENGEVDDI 215 (1201)
Q Consensus 145 g~plaGv~V~L~~~~g~~i~s--ttTd~~G~f~F~~l~P---G---~Y~l~~~-~~g~~~~~~~~~~V~v~~~~~~v~~~ 215 (1201)
+..+.-++|.|+. +|..+.+ .+.+.+-.|+|.+||- | .|+|.+. -+||.....+ ..+ .+.
T Consensus 19 g~rp~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lp~y~~G~~i~YtV~E~~v~gY~~~i~G-~~I---------TNt 87 (187)
T 1d2o_A 19 GKRPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDING-TTI---------TNK 87 (187)
T ss_dssp SCCCSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEEEEET-TEE---------EEE
T ss_pred CCCCceEEEEEEE-CCeEeeeEEEecCCCcEEEECCCcccCCCCEEEEEEEeCCCCCcEEeecc-EEE---------Ecc
Confidence 5567789999986 4644433 2234566799999985 4 6999874 4788754322 112 111
Q ss_pred EeecCcccceE-EEee-----cCceEEEEEEEEeCCcceeecCCCCCCCccccccceeeeecCCcceeeceecc---c--
Q 000982 216 FFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPC---G-- 284 (1201)
Q Consensus 216 l~i~G~~vsG~-V~~~-----g~Pl~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lpp---G-- 284 (1201)
......+|.++ +..+ +.--..++|.|+... ..+ +. ......+.+..|+|.+||. |
T Consensus 88 ~~P~~~~i~V~K~W~d~~~~~~~rP~~I~v~L~~dG-~~~------------g~-~~~l~~~n~W~~tf~~Lp~~~~G~~ 153 (187)
T 1d2o_A 88 YTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDG-KAT------------GK-TAILNESNNWTHTWTGLDEKAKGQQ 153 (187)
T ss_dssp ECTTEEEEEEEEEEESSTTSSSCCCSCEEEEEEETT-EEE------------EE-EEEESGGGTTEEEEEEEESEETTEE
T ss_pred ccCccccceeeEEEcCCCCccCCCCceEEEEEEeCC-eEe------------ce-EEEEecCCceEEEEcCCCccCCCCE
Confidence 11111234333 3332 212256899999852 110 00 0122345678999999995 3
Q ss_pred -ceeeeee
Q 000982 285 -QYELVPH 291 (1201)
Q Consensus 285 -~Y~v~~~ 291 (1201)
.|+|.+.
T Consensus 154 i~YtV~E~ 161 (187)
T 1d2o_A 154 VKYTVEEL 161 (187)
T ss_dssp CCEEEEEC
T ss_pred EEEEEEEe
Confidence 4777773
No 144
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=71.39 E-value=6.2 Score=37.65 Aligned_cols=50 Identities=20% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCC-CCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQP-KDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p-~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.+ +-+-.|+..+.+........+-.+=.|.|.||+||+.|.++|++...
T Consensus 47 g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~ 97 (120)
T 1wfu_A 47 PQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSP 97 (120)
T ss_dssp CGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEEECS
T ss_pred CCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEEECC
Confidence 344 66777773332222222222333346999999999999999998643
No 145
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=70.74 E-value=14 Score=33.62 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=26.3
Q ss_pred CCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEE
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVK 1023 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~ 1023 (1201)
..-.|.|+||.||+.|.|++.+..+ ..++.|...++.
T Consensus 57 ~~ts~~l~~L~p~t~Y~~~V~A~~~-----~g~s~~~~~~~~ 93 (105)
T 2cum_A 57 GITSHQLLGLFPSTSYNARLQAMWG-----QSLLPPVSTSFT 93 (105)
T ss_dssp SCSEEEECSCCTTCEEEEEEEEEBT-----TBCCCCEEEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEEeC-----CcccCCEEEEEE
Confidence 4458999999999999999998532 233445454444
No 146
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=70.61 E-value=4.7 Score=38.57 Aligned_cols=43 Identities=21% Similarity=0.441 Sum_probs=32.4
Q ss_pred eeeeEEeecCCCC--CceeEEEeecc------cceeeeeeecCCCceEeecc
Q 000982 948 ATGTITLLSGQPK--DGVSVEARSES------KGYYEETVTDTSGSYRLRGL 991 (1201)
Q Consensus 948 ~~G~V~~~~g~p~--~gv~v~~~~~~------~~~~~~~~Td~~G~~~i~gL 991 (1201)
+.|++.. +|+|. ++|.|++.+.+ .....++.||++|+|.|.|-
T Consensus 7 V~G~L~C-~~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G~ 57 (117)
T 3uaf_A 7 ATGVLKC-PTDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTGC 57 (117)
T ss_dssp EEEEEEC-TTCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEEE
T ss_pred EEEEEEe-CCccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEEE
Confidence 4566654 67784 58888887532 34688999999999999995
No 147
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=69.33 E-value=57 Score=44.88 Aligned_cols=212 Identities=13% Similarity=0.147 Sum_probs=107.4
Q ss_pred eEEecccCCCCCccEEEEEEecCccccccccceEE-EEee-eCCCcceec----cccccCccceeeecCCc---cceee-
Q 000982 777 LYTEGSVSPPLSGVNIRIIAAEDSQIASLKKGHLA-LETS-TGADGSFIG----GPLYDDITYNVEASKPG---YYLRQ- 846 (1201)
Q Consensus 777 ~~i~G~v~p~l~gv~i~i~~~~~~~~~~~~~g~~~-~~~~-Td~~G~f~~----~~L~~~~~y~i~a~k~g---y~~~~- 846 (1201)
+.++....|.-.-+.|+|.+.++. .+. .... ||.+|.|.. .+-..-..|.|.+...+ .....
T Consensus 149 i~~d~~~~p~~~~v~v~l~dP~g~--------~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~ 220 (1661)
T 2b39_A 149 FTVDHKLLPVGQTVFITIETPDGI--------PVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQVFSAE 220 (1661)
T ss_dssp EEECTTSCCCCCCEEEEEEETTEE--------EEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcccCceEEEEEECCCCC--------EEeeeeecccccCCeEeeeeeCCCCccccceEEEEEeecCCCceEEEE
Confidence 445555556434467777765542 222 2344 568887654 33334458998886432 11111
Q ss_pred ---ec---C---Cccccc----cc---ccEEEEEEecCCCCCCCceeE-EE--eecCC---Cc----ccCccccCCceee
Q 000982 847 ---VG---P---NSFSCQ----KL---SQISVRIYSKDDAGEPIPSVL-LS--LSGDD---GY----RNNSVSWAGGSFH 900 (1201)
Q Consensus 847 ---~~---~---~~f~~~----~l---~~i~v~v~~~~~~~~pL~~vl-~s--lsg~~---~~----r~n~~T~~~G~~~ 900 (1201)
.+ | ..+... .. ..+.++|...-..|.|++|.. ++ +...+ .+ +....+|.+|.+.
T Consensus 221 F~VeEYvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~~~~~~~~~~~~~~~~~~~~~~~dg~G~~~ 300 (1661)
T 2b39_A 221 FEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNIIARFLYGEQVDGTAFVIFGVQDGDRRISLTHSLTRVPINDGNGEAI 300 (1661)
T ss_dssp EEECCCCCCSBCCEEECSSSSCCSSCSSCCCEEEECBBSSSCBCCEEEEEEEEEECSSCEECCGGGCEEEEESSSCEEEC
T ss_pred EEEEEccCCcEEEEEEcCcceEecCCCcEEEEEEEEEEcCCCceeeEEEEEEEEecCCcccccCcceeeeEecCCeEEEE
Confidence 11 1 122211 11 346666666555699999853 23 22221 11 1133588899998
Q ss_pred ec--cccC------------ccccchhhhhh-------------cccCCCceeEecCCCcceeEEEEEEEEEEeeeeeEE
Q 000982 901 FD--NLFP------------GNFYLRPLLKE-------------YAFSPPAQAIELGSGESREVIFQATRVAYSATGTIT 953 (1201)
Q Consensus 901 f~--~L~P------------G~Y~~~~~~ke-------------y~~~p~~~~i~v~~G~~~~v~~~~~r~~~s~~G~V~ 953 (1201)
|. .+.. .++++.+..-| ..+.|.+..|.+.... .. .-....|.+.=++.
T Consensus 301 l~~~~~~~~~~~~~~~~~~~~~~~v~a~V~e~~gg~~~~~~~~~i~i~~~~~~i~~~~~~--~~--~~~g~~~~~~v~~~ 376 (1661)
T 2b39_A 301 LKRQVLLNGVQPSRADALVGKSIYVSATVILQSGSDMVEAERTGIPIVTSPYQIHFTKTP--KF--FKPAMPFDLMVYVT 376 (1661)
T ss_dssp CCTTTTSSSCTTCHHHHSSSCBCEEEEEEEETTTCCCCEECCCCCBCCSCSSBCCBSSCC--SE--ECSSEEEECCBBCB
T ss_pred EehHHhhcccccCChhhccCcEEEEEEEEEEcCCceEEEeeeEEEEEEEeeEEEEEEeCC--Cc--cCCCCcEEEEEEEE
Confidence 84 1111 22333321111 1222333333332111 00 11112233344456
Q ss_pred eecCCCCCceeEEEeecccceeeeeeecCCC--ceEeecccCC-ceEEEEEEEec
Q 000982 954 LLSGQPKDGVSVEARSESKGYYEETVTDTSG--SYRLRGLHPD-TTYVIKVVKKD 1005 (1201)
Q Consensus 954 ~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G--~~~i~gL~pg-~~y~v~~~~~~ 1005 (1201)
..+|+|++++.|++...+ .+.+||++| .|.|. +.++ -.|.|+++..+
T Consensus 377 ~~dG~p~~~~~v~v~~~~----~~~~t~~~G~~~~~i~-~~~~~g~y~l~v~~~d 426 (1661)
T 2b39_A 377 NPDGSPARHIPVVTQGSN----VQSLTQDDGVAKLSIN-TQNKRDPLTITVRTKK 426 (1661)
T ss_dssp BTTTBCCSSCCEEETTCC----CCCCCSSSCBCCCEEE-ECSCCSCEEEEEEECC
T ss_pred cCCCCCcCCceEEEeccc----eEEEECCCCeEEEEEE-CCCCCcEEEEEEEEcC
Confidence 789999999988876422 257899999 56665 3332 37999998654
No 148
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=69.30 E-value=3.1 Score=42.80 Aligned_cols=24 Identities=33% Similarity=0.577 Sum_probs=21.1
Q ss_pred eecCccceeeeeec-Ccc-eeeeccCC
Q 000982 167 ITSSEGSYLFKNII-PGK-YKLRASHP 191 (1201)
Q Consensus 167 tTd~~G~f~F~~l~-PG~-Y~l~~~~~ 191 (1201)
+|+++| ..|.+++ .|. |.|.+.+.
T Consensus 103 ~T~~dG-~~F~~l~~~G~~Yl~vE~~~ 128 (181)
T 2l4o_A 103 LTEAEG-AKFNTANLPAAKYKIYEIHS 128 (181)
T ss_dssp ECCSSC-EEEECTTSCSSEEEEEECTT
T ss_pred eeCCCC-EEeecCccCCceEEEEEccC
Confidence 789999 9999998 899 99998653
No 149
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=67.09 E-value=8.9 Score=35.61 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=34.2
Q ss_pred CCCCCceeEEEeeccc-ceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSESK-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~-~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.++.+-.|+....+. .......+...-.|.|.||.||+.|.+++++...
T Consensus 47 g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 97 (120)
T 2crm_A 47 GATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISD 97 (120)
T ss_dssp SSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEET
T ss_pred CCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEcC
Confidence 5677777777764432 1222223344668999999999999999998543
No 150
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.04 E-value=7.9 Score=35.73 Aligned_cols=48 Identities=25% Similarity=0.389 Sum_probs=30.1
Q ss_pred CCCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 958 QPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 958 ~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.++.+-.|+....+.....+..+..+-.|.|+||.|+..|.+++++..
T Consensus 39 ~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2db8_A 39 VPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFN 86 (110)
T ss_dssp SCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEEC
T ss_pred CCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEe
Confidence 455555555543221111122233566899999999999999999753
No 151
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=66.79 E-value=6.9 Score=35.80 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=33.2
Q ss_pred CCCCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 957 GQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
|.++.+-.|+....+.........-..-.|.|.||.||+.|.++|++..
T Consensus 38 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2crz_A 38 GSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAAN 86 (110)
T ss_dssp TSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEEC
T ss_pred CceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEc
Confidence 5667777777764332211222234467899999999999999999754
No 152
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=66.05 E-value=11 Score=33.79 Aligned_cols=28 Identities=32% Similarity=0.464 Sum_probs=22.6
Q ss_pred eeecCCCceEeecccCCceEEEEEEEec
Q 000982 978 TVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 978 ~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
......-.|.|.||.||+.|.|++.+..
T Consensus 52 ~v~~~~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 52 TVPGSSSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp EEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred EeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 3444566899999999999999999753
No 153
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=65.76 E-value=15 Score=33.90 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=21.6
Q ss_pred ecCCCceEeecccCCceEEEEEEEec
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.-..-.|.|+||.||+.|.|++.+..
T Consensus 55 ~~~~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 55 PGSAVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp ETTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred CCCccEEEEeCCCCCCEEEEEEEEEe
Confidence 33456899999999999999999753
No 154
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=64.62 E-value=12 Score=34.15 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=32.8
Q ss_pred cCCCCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.++.+-.|+....+... ........-.|.|.||.|++.|.+++.+...
T Consensus 34 ~g~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 83 (106)
T 1x4x_A 34 NGTDVTEYRLEWGGVEGSM-QICYCGPGLSYEIKGLSPATTYYCRVQALSV 83 (106)
T ss_dssp SSSCCCEEEEEEESSTTSC-CEEEEESCSEEEEESCCSSCEEEEEEEEECS
T ss_pred CCCcceEEEEEEEcCCCce-EEEEeCCcceEEEcCCCCCCEEEEEEEEEcC
Confidence 4556777666665332111 1222334558999999999999999998543
No 155
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=63.55 E-value=1.1e+02 Score=37.64 Aligned_cols=25 Identities=28% Similarity=0.357 Sum_probs=21.0
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|.||.||+.|.|++.+-..
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 356 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITY 356 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEEC
Confidence 3368999999999999999997543
No 156
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=63.54 E-value=21 Score=37.56 Aligned_cols=56 Identities=20% Similarity=0.369 Sum_probs=38.1
Q ss_pred eEEeeeeeeeEEeeCCCcce-----eeEEEEE--cC----ccc-ccccCCceeeeeeeecceeEEeeeee
Q 000982 321 FQVTGFSVGGRVVDENDMGV-----EGVKILV--DG----HER-SITDRDGYYKLDQVTSNRYTIEAVKV 378 (1201)
Q Consensus 321 f~~~g~sv~G~V~d~~G~pl-----~Ga~V~l--~G----~~~-~~TDadG~y~~~~L~pG~Y~I~~~~~ 378 (1201)
+..+...+.|+|+. +|+|| .|+.|.+ .| ..+ .....||.|. ..|=.|+|.|.....
T Consensus 6 YDeP~a~l~G~iv~-tGE~i~~~~~~gv~i~l~E~gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~g 73 (215)
T 3hn5_A 6 YDAPESMLTGRVMY-NGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSG 73 (215)
T ss_dssp ----CEEEEEEEEE-TTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTT
T ss_pred CCCCCceEEEEEEE-CCCEeeecCCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecC
Confidence 44445678999984 45554 4588888 22 122 4678999999 899999999998743
No 157
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=63.48 E-value=6.5 Score=40.47 Aligned_cols=48 Identities=6% Similarity=0.124 Sum_probs=34.5
Q ss_pred ccceeEEEEEeccccc------------------cccc--------ccCCCceEEEEeee-cce-EEE-EEcCCCCCC
Q 000982 50 DYSHVTVELRTLDGLV------------------KEST--------QCAPNGYYFIPVYD-KGS-FVI-KVNGPEGWS 98 (1201)
Q Consensus 50 ~lsgv~V~L~~~~G~~------------------~~~t--------~t~~nG~y~i~~l~-~G~-Y~l-~~~~P~G~~ 98 (1201)
.|.||+|+++...+.+ .... .|+.|| ..|..++ .|. |.+ +...|.+|.
T Consensus 57 ~L~GV~F~v~kv~~~l~~d~~~~~~~~~~~~~~~~~~g~~a~~~~~~T~~dG-~~F~~l~~~G~~Yl~vE~~~ps~~~ 133 (181)
T 2l4o_A 57 EIAGVMFVWTNTNNEIIDENGQTLGVNIDPQTFKLSGAMPATAMKKLTEAEG-AKFNTANLPAAKYKIYEIHSLSTYV 133 (181)
T ss_dssp ECSCCEEEEEETTCEEECTTSCEEEEEBCTTTCCBSSSCCSSCCEEECCSSC-EEEECTTSCSSEEEEEECTTSCCCS
T ss_pred ecCCcEEEEEeccchhccCcccccccccccccccccccccccccceeeCCCC-EEeecCccCCceEEEEEccCCCccc
Confidence 5789999998755211 1111 567799 8899887 799 999 778888665
No 158
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=62.16 E-value=1.3e+02 Score=41.53 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=36.6
Q ss_pred eeeEEeecCCCCCceeEEEeeccc---ce------eeeeeecCCC--ceEeecccCC-ceEEEEEEEec
Q 000982 949 TGTITLLSGQPKDGVSVEARSESK---GY------YEETVTDTSG--SYRLRGLHPD-TTYVIKVVKKD 1005 (1201)
Q Consensus 949 ~G~V~~~~g~p~~gv~v~~~~~~~---~~------~~~~~Td~~G--~~~i~gL~pg-~~y~v~~~~~~ 1005 (1201)
.=.+...+|+|++++.|++..... .+ ....+||++| .|.|. +..+ .+|.|+++..+
T Consensus 372 ~v~~~~~dG~p~~~~~v~l~~~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~~-~~~~~~~~~l~v~~~d 439 (1676)
T 3cu7_A 372 KVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLN-LPSGVTVLEFNVKTDA 439 (1676)
T ss_dssp EEEEEETTCCBCCSCEEEEEEEEEETTSCEEECCCEEEECCSSSCEEEEEEC-CCTTEEEEEEEEEECC
T ss_pred EEEEEcCCCCccCcceEEEeccccccccccccccccceeEECCCCeEEEEEE-CCCCCeEEEEEEEEcc
Confidence 334567899999999988764321 11 3367899999 55555 4344 35788888643
No 159
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=62.14 E-value=23 Score=31.95 Aligned_cols=27 Identities=30% Similarity=0.433 Sum_probs=22.0
Q ss_pred eecCCCceEeecccCCceEEEEEEEec
Q 000982 979 VTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 979 ~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.....-.|.|+||.||+.|.|++.+..
T Consensus 55 v~~~~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 55 VPYSSSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp EETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 333456899999999999999999753
No 160
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=61.92 E-value=17 Score=36.99 Aligned_cols=49 Identities=20% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCCCCceeEEEeeccc--ceeeeeeec-CCCceEeecccCCceEEEEEEEec
Q 000982 957 GQPKDGVSVEARSESK--GYYEETVTD-TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~--~~~~~~~Td-~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
+.++.+-.|+....+. ......... ..-.|.|.||.||+.|.+++.+..
T Consensus 144 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 195 (214)
T 2ibg_A 144 EHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFS 195 (214)
T ss_dssp GGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred CCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEc
Confidence 3456666676653322 222222222 246899999999999999999754
No 161
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=61.27 E-value=49 Score=36.74 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=32.4
Q ss_pred cCCCCCceeEEEeecc-cce-eeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 956 SGQPKDGVSVEARSES-KGY-YEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~-~~~-~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.|.|+.+-.|+....+ ... .........-.|.|.||.||+.|.+++.+..
T Consensus 319 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n 370 (389)
T 2jll_A 319 GGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAAN 370 (389)
T ss_dssp CSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred CCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEc
Confidence 3557777777776432 111 1222333445799999999999999999853
No 162
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=61.17 E-value=43 Score=33.86 Aligned_cols=21 Identities=19% Similarity=0.369 Sum_probs=18.8
Q ss_pred CceEeecccCCceEEEEEEEe
Q 000982 984 GSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
-.|.|.||.|++.|.+++.+-
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 70 FTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEECSCCTTCEEEEEEEEE
T ss_pred eeEEecCCcCCCEEEEEEEEE
Confidence 468999999999999999975
No 163
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=61.15 E-value=20 Score=32.62 Aligned_cols=25 Identities=28% Similarity=0.692 Sum_probs=21.1
Q ss_pred ecCCCceEeecccCCceEEEEEEEe
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
.-..-.|.|+||.||+.|.|++.+.
T Consensus 52 ~~~~~~~~l~~L~p~t~Y~~~V~A~ 76 (104)
T 2rb8_A 52 TEDENQYSIGNLKPDTEYEVSLISR 76 (104)
T ss_dssp ETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 3345579999999999999999975
No 164
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=61.05 E-value=18 Score=36.85 Aligned_cols=50 Identities=24% Similarity=0.289 Sum_probs=32.8
Q ss_pred cCCCCCceeEEEeeccccee-eeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 956 SGQPKDGVSVEARSESKGYY-EETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~~~-~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.+.++.+-.|+......... ........-.|.|.||.||+.|.+++.+..
T Consensus 136 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 136 GGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp TTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCceEEEEEECCCCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence 35577777777664222222 222222335799999999999999999753
No 165
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.35 E-value=18 Score=32.81 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=33.7
Q ss_pred cCCCCCceeEEEeeccc--ceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.++.+-.|+....+. .... ...-.+-.|.|.||.|++.|.+++.+...
T Consensus 35 ~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 86 (109)
T 1x5x_A 35 PSDEGISYILEMEEETSGYGFKP-KYDGEDLAYTVKNLRRSTKYKFKVIAYNS 86 (109)
T ss_dssp CSSSSCEEEEEECCSSSSCCCEE-EEEESCSEEEEESCCSSCEEEEEEEEECS
T ss_pred CCCcccEEEEEEecCCCCcceEE-eEeCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 34577777777664432 2222 22333668999999999999999998643
No 166
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.03 E-value=23 Score=31.19 Aligned_cols=24 Identities=29% Similarity=0.576 Sum_probs=20.8
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.||+.|.|++.+..
T Consensus 53 ~~~~~~l~~L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 53 EEDTAELQGLRPGSEYTVSVVALH 76 (94)
T ss_dssp SCCEEEECSCCCCSEEEEEEEECS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 355899999999999999999853
No 167
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=59.79 E-value=11 Score=34.24 Aligned_cols=52 Identities=21% Similarity=0.305 Sum_probs=35.3
Q ss_pred eecCCCCCceeEEEeecccc-ee-eeee--e-cCCCceEeecccCCceEEEEEEEec
Q 000982 954 LLSGQPKDGVSVEARSESKG-YY-EETV--T-DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 954 ~~~g~p~~gv~v~~~~~~~~-~~-~~~~--T-d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..+|.|+.+-.|+....+.. .. .... . ...-.|.|.||.||+.|.|++.+..
T Consensus 31 ~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n 87 (105)
T 2haz_A 31 ATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 87 (105)
T ss_dssp CCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEc
Confidence 35778899988887754321 11 0011 1 1346799999999999999999753
No 168
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=59.36 E-value=16 Score=33.61 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=36.1
Q ss_pred eeeeeEEeeCCCcceeeEEEEEcCccccc-ccCCceeeeeeeecceeEEeeeeee
Q 000982 326 FSVGGRVVDENDMGVEGVKILVDGHERSI-TDRDGYYKLDQVTSNRYTIEAVKVH 379 (1201)
Q Consensus 326 ~sv~G~V~d~~G~pl~Ga~V~l~G~~~~~-TDadG~y~~~~L~pG~Y~I~~~~~~ 379 (1201)
..|.+...|.+| .|..++|++||..+.+ |-+.=.|.+... +|.|+|.+++-.
T Consensus 19 v~i~a~A~D~dg-~V~kVef~vdg~~vg~dt~apy~~~w~~~-~G~htl~a~AtD 71 (98)
T 3pe9_A 19 LKITATASDSDG-KISRVDFLVDGEVIGSDREAPYEYEWKAV-EGNHEISVIAYD 71 (98)
T ss_dssp EEEEEEECCSSS-CEEEEEEEETTEEEEEECSSSEEEEEECC-SEEEEEEEEEEE
T ss_pred EEEEEEEEeCCC-CEEEEEEEECCEEecccccCCEEEEEEcC-CccEEEEEEEEE
Confidence 356666666655 7999999999987753 323335555555 899999998743
No 169
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=59.25 E-value=16 Score=34.30 Aligned_cols=28 Identities=29% Similarity=0.256 Sum_probs=22.3
Q ss_pred eeeecCCCceEeecccCCceEEEEEEEe
Q 000982 977 ETVTDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 977 ~~~Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
.......-.|.|+||.||+.|.|++.+.
T Consensus 63 ~~v~~~~t~~~l~gL~PgT~Y~~~V~A~ 90 (112)
T 2cui_A 63 LMVPGTRHSAVLRDLRSGTLYSLTLYGL 90 (112)
T ss_dssp EEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred EEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 3333444589999999999999999975
No 170
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=59.23 E-value=16 Score=38.60 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=23.8
Q ss_pred eeecCCC-ceEeecccCCceEEEEEEEecC
Q 000982 978 TVTDTSG-SYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 978 ~~Td~~G-~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
...+.++ .|.+.||.|++.|..++++.+.
T Consensus 193 ~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~ 222 (238)
T 2w1n_A 193 AEIGKDETSYTFKKLNRHTIYNFKIAAKYS 222 (238)
T ss_dssp EEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred EEeeccceEEEecCCCCCCEEEEEEEEEeC
Confidence 4455555 7999999999999999998654
No 171
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=59.10 E-value=1.7e+02 Score=40.09 Aligned_cols=53 Identities=23% Similarity=0.157 Sum_probs=36.8
Q ss_pred eeeeEEeecCCCCCceeEEEeecccceeeeeeecCCCceEeecccC--CceEEEEEEEe
Q 000982 948 ATGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHP--DTTYVIKVVKK 1004 (1201)
Q Consensus 948 ~~G~V~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~p--g~~y~v~~~~~ 1004 (1201)
+.=+|+..+|+|++++.|.+...+ ...+||+||...+.=-.| ...+.|+++..
T Consensus 362 ~~v~v~~~dg~P~~~~~V~v~~~~----~~~tTd~~G~a~f~i~t~~~~~~l~i~~~~~ 416 (1642)
T 3prx_B 362 LTVYVTNPDGSPAAHVPVVSEAFH----SMGTTLSDGTAKLILNIPLNAQSLPITVRTN 416 (1642)
T ss_dssp EEEEEECTTSCBCCSCEEEEGGGT----EEEECCTTSEEEEEECCCTTCCCCEEEEECC
T ss_pred EEEEEECCCCCCCCCceEEEEecc----ceeeeCCCceEEEEEECCCCCcEEEEEEEEc
Confidence 344556889999999999886322 467999999766653233 24677777754
No 172
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=58.66 E-value=8 Score=36.96 Aligned_cols=44 Identities=14% Similarity=0.284 Sum_probs=32.7
Q ss_pred eEEeeeEeeeecCccccccCCCC--cceeEEEeccC------CCeeeeeeecCccceeeee
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGP--SNVNVELLSHS------GDLISSVITSSEGSYLFKN 178 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~pl--aGv~V~L~~~~------g~~i~sttTd~~G~f~F~~ 178 (1201)
..|.|++.= .+.|. .+|.|+|++.+ ...+.++.||++|.|.+.+
T Consensus 5 V~V~G~L~C---------~~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 5 LMATGVLKC---------PTDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEEC---------TTCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEe---------CCccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEE
Confidence 457888874 14564 48999998622 2567899999999999985
No 173
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=58.64 E-value=7.6 Score=42.84 Aligned_cols=52 Identities=21% Similarity=0.265 Sum_probs=40.7
Q ss_pred eeeeEEeeCCCcceeeEEEEE---cCccc---ccccCCceeee--eeeecceeEEeeeeee
Q 000982 327 SVGGRVVDENDMGVEGVKILV---DGHER---SITDRDGYYKL--DQVTSNRYTIEAVKVH 379 (1201)
Q Consensus 327 sv~G~V~d~~G~pl~Ga~V~l---~G~~~---~~TDadG~y~~--~~L~pG~Y~I~~~~~~ 379 (1201)
.++-+|.| .|.||+|..|.+ +|... .+||++|...+ ....+|.++|++...+
T Consensus 22 t~tatV~D-~gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 22 TYTVKVMK-GDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp EEEEEEEE-TTEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred EEEEEEEE-CCcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 45557889 999999999988 55322 58999998775 4557899999998755
No 174
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=58.44 E-value=23 Score=31.89 Aligned_cols=25 Identities=36% Similarity=0.642 Sum_probs=21.1
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..-.|.|.||.||+.|.|++.+..
T Consensus 52 ~~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 52 SSITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp TTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred CcceEEEECCCCCCCEEEEEEEEEe
Confidence 3445799999999999999999753
No 175
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.26 E-value=12 Score=34.12 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=19.4
Q ss_pred ceEeecccCCceEEEEEEEec
Q 000982 985 SYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 985 ~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.|.|+||+||+.|.|++.+..
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~ 82 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLR 82 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEC
Confidence 999999999999999999853
No 176
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=57.83 E-value=19 Score=32.34 Aligned_cols=47 Identities=17% Similarity=0.266 Sum_probs=29.3
Q ss_pred CCCceeEEEeecc-cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++-+-.|+....+ .........-..-+|.|.||.|++.|.+++.+..
T Consensus 36 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 36 ELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEE
T ss_pred ceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEc
Confidence 3555555554332 1122222333445899999999999999999753
No 177
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=57.62 E-value=1.6e+02 Score=29.49 Aligned_cols=26 Identities=35% Similarity=0.543 Sum_probs=21.6
Q ss_pred ecCCCceEeecccCCceEEEEEEEec
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
....-.|.|.||.|++.|.+++.+..
T Consensus 60 ~~~~~~~~i~~L~p~t~Y~~~V~A~n 85 (211)
T 3p4l_A 60 NATTLSYLVTGLKPNTLYEFSVMVTK 85 (211)
T ss_dssp EESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCceEEEecCcCCCCEEEEEEEEEc
Confidence 33455899999999999999999754
No 178
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=57.27 E-value=22 Score=39.14 Aligned_cols=48 Identities=25% Similarity=0.256 Sum_probs=38.3
Q ss_pred CCCCcceeEEEeccCCCee-eeeeecCccceee--eeecCcceeeeccCCC
Q 000982 145 GGGPSNVNVELLSHSGDLI-SSVITSSEGSYLF--KNIIPGKYKLRASHPN 192 (1201)
Q Consensus 145 g~plaGv~V~L~~~~g~~i-~sttTd~~G~f~F--~~l~PG~Y~l~~~~~g 192 (1201)
|+|++|..|.....+|... .+.+||++|...+ ....+|.+.|.++-.+
T Consensus 31 gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 31 DKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp TEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred CcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 6899999999887777432 4678999999875 4568899999987655
No 179
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=57.27 E-value=1.7e+02 Score=29.88 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=30.9
Q ss_pred CCCceeEEEeecc-cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.|-.|+....+ ............-.|.|.||.|++.|.+++.+-.
T Consensus 32 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 32 KPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp CCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 5566666655332 1112223345667899999999999999999753
No 180
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=56.54 E-value=52 Score=34.33 Aligned_cols=51 Identities=16% Similarity=0.311 Sum_probs=36.6
Q ss_pred eeeeeeeEEeeCCCcce----eeEEEEE--cC----cc-cccccCCceeeeeeeecceeEEeee
Q 000982 324 TGFSVGGRVVDENDMGV----EGVKILV--DG----HE-RSITDRDGYYKLDQVTSNRYTIEAV 376 (1201)
Q Consensus 324 ~g~sv~G~V~d~~G~pl----~Ga~V~l--~G----~~-~~~TDadG~y~~~~L~pG~Y~I~~~ 376 (1201)
+...+.|+|+. +|+|| .|+.+.| .| .. -.....||.|+ .-|=.|+|.|...
T Consensus 6 P~a~l~G~iv~-tgE~i~~~~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~ 67 (202)
T 4fxt_A 6 PKATLTGKAIY-DGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQDGSYS-VSLFNGDYKLVRM 67 (202)
T ss_dssp CEEEEEEEEEE-TTEECBCCTTTEEEEEECCC----CCEEEEBCTTSEEE-EEEESEEEEEEEE
T ss_pred CCceEEEEEEE-CCCEeeecCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEEcceeEEEEC
Confidence 34568889884 35544 4788887 22 11 24678999999 8999999999944
No 181
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=56.27 E-value=19 Score=33.63 Aligned_cols=46 Identities=20% Similarity=0.197 Sum_probs=29.1
Q ss_pred CCCceeEEEeecccc--eeeeeeecCCCceEeecccCCceEEEEEEEe
Q 000982 959 PKDGVSVEARSESKG--YYEETVTDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~--~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
++.+-.|+....+.. ..+..+....-.|.|.||.||+.|.|++.+.
T Consensus 30 ~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 30 SYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp CCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred cccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 345555554433211 2222333345679999999999999999975
No 182
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=55.45 E-value=2.5e+02 Score=34.42 Aligned_cols=26 Identities=15% Similarity=0.264 Sum_probs=21.5
Q ss_pred cCCCceEeecccCCceEEEEEEEecC
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
...-.|.|.||.|++.|.+++.+...
T Consensus 419 ~~~~~~~i~~L~p~t~Y~~~V~A~n~ 444 (731)
T 2v5y_A 419 NSHPQHTITNLSPYTNVSVKLILMNP 444 (731)
T ss_dssp CSSCEEEECSCCSSCEEEEEEEEECS
T ss_pred CCcceEEECCCCCCCEEEEEEEEEcC
Confidence 34557999999999999999997543
No 183
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.99 E-value=19 Score=33.40 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=34.1
Q ss_pred cCCCCCceeEEEeecccc-eeeee-eecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSESKG-YYEET-VTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~-~~~~~-~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.|+.+-.|+....+.. ...-. ..-..-.|.|.||.||+.|.++|.+...
T Consensus 38 gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~ 90 (112)
T 1bpv_A 38 GGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNA 90 (112)
T ss_dssp TTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEECT
T ss_pred CCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEEEC
Confidence 467888888887754321 11111 1123457999999999999999998643
No 184
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=54.92 E-value=19 Score=36.40 Aligned_cols=28 Identities=21% Similarity=0.418 Sum_probs=22.6
Q ss_pred eeecCCCceEeecccCCceEEEEEEEec
Q 000982 978 TVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 978 ~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
......-.|.|.||.||+.|.|++.+..
T Consensus 159 ~v~~~~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 159 DLPSTATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp EEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred EcCCceeEEEeCCCCCCCEEEEEEEEEc
Confidence 3344456899999999999999999753
No 185
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.83 E-value=25 Score=31.54 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=29.5
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+........++ .-.|.|.||.|++.|.|++.+..
T Consensus 37 ~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~i~~L~p~t~Y~~~V~A~n 82 (106)
T 2ed8_A 37 PVQGYRLFCTEVSTGKEQNIEVD-GLSYKLEGLKKFTEYSLRFLAYN 82 (106)
T ss_dssp CCCEEEEEEEETTTCCEEEEEEC-SSCEEEESCCTTCEEEEEEEEEC
T ss_pred CeeEEEEEEEECCCCceEEEeCC-ccEEEECCCCCCCEEEEEEEEEe
Confidence 45566665543321111112222 57899999999999999999754
No 186
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=54.81 E-value=1.1e+02 Score=33.74 Aligned_cols=50 Identities=24% Similarity=0.359 Sum_probs=30.6
Q ss_pred CCCCCceeEEEeecccc-eeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSESKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~~-~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.|+.+..++....+.. .........+..+.|.+|.|++.|.+++.+...
T Consensus 224 g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~ 274 (389)
T 2jll_A 224 GVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNG 274 (389)
T ss_dssp TSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEES
T ss_pred CcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcC
Confidence 44555555554433221 122222334578999999999999999987543
No 187
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.02 E-value=13 Score=33.75 Aligned_cols=25 Identities=16% Similarity=0.389 Sum_probs=21.0
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|.||.||+.|.+++.+...
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2yuw_A 63 DKTKFTITGLPTDAKIFVRVKAVNA 87 (110)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEEET
T ss_pred ccCEEEECCCCCCCEEEEEEEEEcC
Confidence 3557999999999999999998543
No 188
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=53.97 E-value=38 Score=40.84 Aligned_cols=110 Identities=18% Similarity=0.137 Sum_probs=55.7
Q ss_pred CCceeeeccccCcccc-ch--hhhhhccc--CCCceeEecC--CCcceeEEEEEEEEEEeeeeeEEe--ecCCCCCceeE
Q 000982 895 AGGSFHFDNLFPGNFY-LR--PLLKEYAF--SPPAQAIELG--SGESREVIFQATRVAYSATGTITL--LSGQPKDGVSV 965 (1201)
Q Consensus 895 ~~G~~~f~~L~PG~Y~-~~--~~~key~~--~p~~~~i~v~--~G~~~~v~~~~~r~~~s~~G~V~~--~~g~p~~gv~v 965 (1201)
..-.+.+.+|.|++-| |+ +.-..=.. .+.+..+.+. ++.-..+.+. .....++.=+=.. -.+.++.+-.|
T Consensus 398 ~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~-~~s~tSV~LsW~pP~~~ng~I~~Y~V 476 (536)
T 3fl7_A 398 TRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLE-GRSTTSLSVSWSIPPPQQSRVWKYEV 476 (536)
T ss_dssp CSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEE-ECCC-CCEEEEECCTTTTTTCSEEEE
T ss_pred ccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCcee-eccCCeEEEEEECCcCCCCcccEEEE
Confidence 3457889999999866 44 33211111 2334444433 3333333330 0111111100011 11335666666
Q ss_pred EEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 966 EARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 966 ~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
+....+.........-..-.|.|+||.||+.|.|++.+..
T Consensus 477 ~y~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n 516 (536)
T 3fl7_A 477 TYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALT 516 (536)
T ss_dssp EEEEC--CCCCEEEEESSSEEECCSCCSSCEEEEEEEEEC
T ss_pred EEEECCCCceEEEEcCCCCEEEECCCCCCCEEEEEEEEEc
Confidence 6654432222233344556899999999999999999753
No 189
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.63 E-value=12 Score=34.16 Aligned_cols=47 Identities=19% Similarity=0.418 Sum_probs=29.5
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+............-.|.|.||.|++.|.+++++..
T Consensus 45 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 45 TIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp CCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEEC
T ss_pred CccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEEC
Confidence 45555555543321111122233457899999999999999999753
No 190
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=53.32 E-value=22 Score=31.50 Aligned_cols=47 Identities=26% Similarity=0.307 Sum_probs=30.4
Q ss_pred CCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+ .........-..-.|.|.||.||+.|.|++.+..
T Consensus 28 ~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 28 TITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred cccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEe
Confidence 4555555554221 2223333334566899999999999999999753
No 191
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=53.28 E-value=24 Score=32.66 Aligned_cols=51 Identities=18% Similarity=0.262 Sum_probs=33.6
Q ss_pred cCCCCCceeEEEeecc--cce--eeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSES--KGY--YEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~--~~~--~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.|+.+-.|+..... ... ......-..-.|.|.||.||..|.+++.+...
T Consensus 44 ~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 98 (121)
T 1x4z_A 44 GGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNM 98 (121)
T ss_dssp TTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred CCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEEEEEcC
Confidence 4567777777776432 111 11111234567999999999999999998543
No 192
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=52.36 E-value=27 Score=31.65 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=21.3
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..=.|.|+||.||+.|.|++.+..
T Consensus 61 ~~~ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 61 GYYSTATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp TTCCEEEECSCCTTCCEEEEEEEES
T ss_pred CCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 3456799999999999999999863
No 193
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.84 E-value=39 Score=31.06 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+.........-..-.|.|.||.|++.|.|++.+..
T Consensus 60 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 106 (124)
T 2ed9_A 60 FITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMT 106 (124)
T ss_dssp CCCEEEEEEEESSSSCCEEEECSSCSEEEEECCCSSCEEEECEEEEC
T ss_pred EEeEEEEEEEECCCCcceEEecCCcCEEEEcCCCCCCEEEEEEEEEc
Confidence 45555555553321111122334556899999999999999999753
No 194
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=51.28 E-value=30 Score=44.08 Aligned_cols=105 Identities=9% Similarity=0.122 Sum_probs=62.4
Q ss_pred eeecCCcceeeceecccc-eeeeeeccccceEEeeCCCceeeEEeeeeeeccceeEE-eeeeeeeEEeeCCCccee-eEE
Q 000982 268 AVSDADGKFMFKSVPCGQ-YELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQV-TGFSVGGRVVDENDMGVE-GVK 344 (1201)
Q Consensus 268 ~~TD~~G~f~f~~LppG~-Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~-~g~sv~G~V~d~~G~pl~-Ga~ 344 (1201)
+.||..|.-.++.|.|=. -+|...-..-+...++.-....+....+.+.. ..|.. .+..+-.++.++ |+||+ ||.
T Consensus 692 ~~Td~~G~avvp~l~pY~~N~i~iD~~~Lp~dvel~~t~~~v~P~~GAvv~-~~F~~~~g~~~l~~l~~~-G~~lPfGa~ 769 (843)
T 3rfz_B 692 VRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVR-AEFKARVGIKLLMTLTHN-NKPLPFGAM 769 (843)
T ss_dssp CBCCTTSEEEESCCCTTSCEEEEBCGGGSCTTEEESCSEEEECBCTTCEEE-EECCEEESEEEEEEEEET-TEECCTTCE
T ss_pred ceECCCCeEEECCCCcccccEEEEcCCCCCCCEEEeccEEEEEECCCCEEE-EEEEEEeeEEEEEEEeeC-CCCCCCceE
Confidence 679999999998888643 23333111111112222222223222232222 12432 345666778888 99999 898
Q ss_pred EEE-cCcccccccCCceeeeeeeecc-eeEEe
Q 000982 345 ILV-DGHERSITDRDGYYKLDQVTSN-RYTIE 374 (1201)
Q Consensus 345 V~l-~G~~~~~TDadG~y~~~~L~pG-~Y~I~ 374 (1201)
|.- +|+.+...+.+|..-+.+|+++ +.+|+
T Consensus 770 V~~~~~~~~giVg~~G~vyl~gl~~~~~L~V~ 801 (843)
T 3rfz_B 770 VTSESSQSSGIVADNGQVYLSGMPLAGKVQVK 801 (843)
T ss_dssp EEESSSSCEEECCGGGEEEEEEECSEEEEEEE
T ss_pred EEcCCCcEEEEEcCCCEEEEEcCCCCcEEEEE
Confidence 875 4566789999999999999875 44443
No 195
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=50.82 E-value=2e+02 Score=28.58 Aligned_cols=49 Identities=16% Similarity=0.294 Sum_probs=30.0
Q ss_pred cCCCCCceeEEEeecc--cce--eeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 956 SGQPKDGVSVEARSES--KGY--YEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~--~~~--~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.++.+-.|+..... ... .........-.|.+ ||.|++.|.+++.+..
T Consensus 31 ~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n 83 (205)
T 1cfb_A 31 NRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIAFN 83 (205)
T ss_dssp TTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEEEE
T ss_pred CCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEEEE
Confidence 4566777777765332 111 11122223346777 9999999999999753
No 196
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=50.81 E-value=19 Score=32.48 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=20.1
Q ss_pred CCceEeecccCCceEEEEEEEec
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
+-.|.|.||.|++.|.+++.+..
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVT 84 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEC
Confidence 34899999999999999999753
No 197
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=49.53 E-value=40 Score=34.61 Aligned_cols=45 Identities=20% Similarity=0.187 Sum_probs=31.2
Q ss_pred cccceeEEEEEeccccccccccc-CCCceEEEEee--ecceEEEEEcC
Q 000982 49 LDYSHVTVELRTLDGLVKESTQC-APNGYYFIPVY--DKGSFVIKVNG 93 (1201)
Q Consensus 49 i~lsgv~V~L~~~~G~~~~~t~t-~~nG~y~i~~l--~~G~Y~l~~~~ 93 (1201)
.+...+++++..++|....-... ..+|.|.+.-. ..|.|.|.++-
T Consensus 28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~ 75 (191)
T 2k7q_A 28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKK 75 (191)
T ss_dssp CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEE
Confidence 34567899999999876554444 44888774322 67999997765
No 198
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=49.27 E-value=33 Score=35.64 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=19.6
Q ss_pred CceEeecccCCceEEEEEEEec
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-.|.|.||.||+.|.|++.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n 181 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARN 181 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEEEC
Confidence 4799999999999999999753
No 199
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=49.13 E-value=27 Score=35.58 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.5
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.||+.|.+++++..
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n 185 (215)
T 1bqu_A 162 TRSSFTVQDLKPFTEYVFRIRCMK 185 (215)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEE
T ss_pred ccceEEeCCCCCCCEEEEEEEEcc
Confidence 345799999999999999999753
No 200
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=48.72 E-value=23 Score=32.45 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=30.8
Q ss_pred CCCceeEEEeecc-c-ceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES-K-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~-~-~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+ . ...........-.|.|+||.|++.|.+++.+..
T Consensus 48 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 96 (120)
T 1x5f_A 48 DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQN 96 (120)
T ss_dssp CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEEEC
Confidence 6666666665432 1 111112223467899999999999999999753
No 201
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=48.44 E-value=24 Score=32.10 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=32.4
Q ss_pred cCCCCCceeEEEeecccc-eeeee-eecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSESKG-YYEET-VTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~-~~~~~-~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.++.+-.|+....+.. ...-. ..-..-.|.|.||.||+.|.+++++...
T Consensus 36 ~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 88 (111)
T 1x5y_A 36 GAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNI 88 (111)
T ss_dssp CSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEET
T ss_pred CCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEEcC
Confidence 345677777776543211 11100 1123567999999999999999998543
No 202
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=48.02 E-value=30 Score=31.48 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=31.0
Q ss_pred CCCCCceeEEEeecc--cceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+.++.+-.|+....+ .....-...-..-.|.|.||.||+.|.+++.+...
T Consensus 43 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~ 94 (117)
T 1uem_A 43 TLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINP 94 (117)
T ss_dssp SSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEEET
T ss_pred CcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEEEECC
Confidence 445666666654332 11111112224568999999999999999997543
No 203
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.84 E-value=24 Score=31.42 Aligned_cols=51 Identities=18% Similarity=0.361 Sum_probs=32.4
Q ss_pred cCCCCCceeEEEeecccc-eeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSESKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~-~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
++.++.+-.|+....+.. ..........-.|.|.||.|+..|.+++.+...
T Consensus 32 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 32 NSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp CSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECS
T ss_pred CCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeC
Confidence 355677777776544311 111111224457999999999999999997543
No 204
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=47.70 E-value=48 Score=33.37 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=21.4
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|.||.||+.|.|++.+...
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~ 186 (205)
T 1cfb_A 162 RQNNIVIADQPTFVKYLIKVVAIND 186 (205)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEET
T ss_pred CccEEEEcCCCCCcEEEEEEEEEcC
Confidence 4568999999999999999997543
No 205
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=47.36 E-value=25 Score=32.02 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=23.9
Q ss_pred eeeeecCCCceEeecccCCceEEEEEEEe
Q 000982 976 EETVTDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 976 ~~~~Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
+..+....-++.|+||.||..|.|.+.+-
T Consensus 51 ~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~ 79 (95)
T 2h41_A 51 YLDLPSTATSVNIPDLLPGRKYIVNVYQI 79 (95)
T ss_dssp EEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred EEECCCCccEEEECCCCCCCEEEEEEEEE
Confidence 44455566789999999999999999974
No 206
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.20 E-value=23 Score=31.41 Aligned_cols=46 Identities=33% Similarity=0.295 Sum_probs=29.4
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+... .....-..-.|.|.||.|++.|.+++++..
T Consensus 40 ~i~~Y~i~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 85 (103)
T 2edy_A 40 RIISYTVVFRDINSQQ-ELQNITTDTRFTLTGLKPDTTYDIKVRAWT 85 (103)
T ss_dssp CCCEEEEEEEETTSCC-EEEEEESSSCCEECSCCTTCCEEEECCEEC
T ss_pred cEeEEEEEEEECCCCc-cEEEcCCcceEEEcCCCCCCEEEEEEEEEC
Confidence 4555555554332211 222233467899999999999999999753
No 207
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=47.17 E-value=35 Score=31.51 Aligned_cols=50 Identities=10% Similarity=0.173 Sum_probs=33.3
Q ss_pred CCCCCceeEEEeeccc-ceeeeeeecCCCceEeecccCCceEEEEEEEecC
Q 000982 957 GQPKDGVSVEARSESK-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 957 g~p~~gv~v~~~~~~~-~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.|+.+-.|+....+. ....-...-..-.|.|.||.||+.|.+++.+...
T Consensus 46 g~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 96 (120)
T 2yux_A 46 NAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENM 96 (120)
T ss_dssp SSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCCCSSEEEEEEECCCSS
T ss_pred CCCceEEEEEEEECCCCceEEeeecCCcCEEEECCCCCCCEEEEEEEEeeC
Confidence 4678888887764432 1111112234567999999999999999997543
No 208
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=46.95 E-value=19 Score=33.10 Aligned_cols=25 Identities=8% Similarity=0.353 Sum_probs=21.1
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.+-.|.|.||.|++.|.++|.+...
T Consensus 71 ~~~~~~v~~L~p~t~Y~frV~A~n~ 95 (118)
T 1x3d_A 71 SQKQFKITKLSPAMGCKFRLSARND 95 (118)
T ss_dssp SCSEEEEESCCTTCEEEEECCEEES
T ss_pred CCcEEEeCCCCCCCEEEEEEEEEEC
Confidence 4468999999999999999997543
No 209
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=46.36 E-value=27 Score=31.50 Aligned_cols=25 Identities=28% Similarity=0.503 Sum_probs=21.1
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..-.|.|+||.|++.|.+++++..
T Consensus 63 ~~~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 63 AVTTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp ESSSEEEECSCCTTCEEEECEEEEE
T ss_pred CCCCEEEEcCCCCCCEEEEEEEEEe
Confidence 3456899999999999999999753
No 210
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=46.17 E-value=26 Score=34.96 Aligned_cols=80 Identities=18% Similarity=0.321 Sum_probs=46.0
Q ss_pred Ccceeeccc---CCcceEEEEeecCCccccCCCceeee----eeeeeeeeccCccceeEEEEeeeEEEEeeeccccceee
Q 000982 535 SDQFLFRDV---LPGKYRLEVKRTSREASSMEDNWCWE----QSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMT 607 (1201)
Q Consensus 535 ~G~f~f~~L---~PG~Y~v~~~~~~~~~~~~~~~~cw~----~~~~~v~V~~~~~~~~~F~q~Gy~~~i~~sh~v~~~~~ 607 (1201)
++..+|.+| ..|.|.|.++.+..+... .|-|. .....|.|.......+.|-.+|-|-
T Consensus 46 ~~~vtf~~V~~~~aG~Y~l~irYang~~~~---~~~y~~~~~~r~~~v~VNG~~~~~v~fp~Tg~W~------------- 109 (156)
T 2wz8_A 46 NNYLQFNNVYVPQAGTYRMVVQFANAEVFG---QHSYNNNVVDRYCSISVNGGPEKGHYFFNTRGWN------------- 109 (156)
T ss_dssp TSCEEEEEEEESSCEEEEEEEEEECCCBC----------CBCCEEEEEEETTCCCEEEEECCCSSTT-------------
T ss_pred CCEEEEEEEecCCCcEEEEEEEEECCCccc---ccccCCccCcceEEEEECCceeeEEEeCCCCCCC-------------
Confidence 345555544 379999999976332211 13333 4566888877665567776655321
Q ss_pred cCCCCeeeeeeecCceeEEEeCC
Q 000982 608 QQDGSHVPLKVKKGSQHICVESP 630 (1201)
Q Consensus 608 ~~~~~~~~~~l~kG~~~~c~~~~ 630 (1201)
......+.+.|++|.|.|.+...
T Consensus 110 ~~~~~tv~V~L~aG~NtI~~~~~ 132 (156)
T 2wz8_A 110 TYRTDIIDVYLNAGNNTIRFYNG 132 (156)
T ss_dssp CCEEEEEEEEECSEEEEEEEECC
T ss_pred cceEEEEEEEECCCceEEEEEec
Confidence 01112345788999999988643
No 211
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=45.81 E-value=34 Score=32.19 Aligned_cols=25 Identities=24% Similarity=0.465 Sum_probs=21.4
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..-.|.|.||.||+.|.|++.+..
T Consensus 79 ~~~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 79 GSKSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp TTCCEEEECCCCTTCEEEEEEEEEC
T ss_pred CCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 3456899999999999999999853
No 212
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.52 E-value=35 Score=31.54 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=20.9
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|.||.|++.|.|++.+...
T Consensus 69 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 93 (116)
T 2edb_A 69 KQRYYSIERLESSSHYVISLKAFNN 93 (116)
T ss_dssp TCCEEEECSCCSSSBEEEEEEEEET
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEeC
Confidence 3457999999999999999997543
No 213
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=43.88 E-value=2.3e+02 Score=29.49 Aligned_cols=114 Identities=22% Similarity=0.280 Sum_probs=63.1
Q ss_pred eeeEEeeeEeeeecCccccccCCCCcceeEEEeccCCC--eeeeeeecCccceeeeeecCcceeeeccC-CCcEEEEeee
Q 000982 124 TGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGD--LISSVITSSEGSYLFKNIIPGKYKLRASH-PNLSVEVRGS 200 (1201)
Q Consensus 124 ~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~--~i~sttTd~~G~f~F~~l~PG~Y~l~~~~-~g~~~~~~~~ 200 (1201)
+-..++|+|+.. | +.- ...-.|+.++|+..+-. .........||.|+ .-|=.|+|.|.... .-|.-.....
T Consensus 6 P~a~l~G~iv~t-g-E~i---~~~~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~nGpf~~~~~dt 79 (202)
T 4fxt_A 6 PKATLTGKAIYD-G-EAV---GVRSGSSEFALFQDGYALKGSIPVYIAQDGSYS-VSLFNGDYKLVRMGNAPWERPSNDT 79 (202)
T ss_dssp CEEEEEEEEEET-T-EEC---BCCTTTEEEEEECCC----CCEEEEBCTTSEEE-EEEESEEEEEEEEETCSBCCCSSCE
T ss_pred CCceEEEEEEEC-C-CEe---eecCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEEcceeEEEECCCCCcccCCCce
Confidence 345688999842 2 222 12355899999865421 12456678999999 88999999999642 3343000112
Q ss_pred eEEEeeccCce----eeeeEee-------cCcccceEEEe----ecCceEEEEEEEEeC
Q 000982 201 TEVELGFENGE----VDDIFFA-------PGYEIRGLVVA----QGNPILGVHIYLYSD 244 (1201)
Q Consensus 201 ~~V~v~~~~~~----v~~~l~i-------~G~~vsG~V~~----~g~Pl~Ga~V~L~~~ 244 (1201)
+.|.+. +++. +.+-+++ .|-.|..++.- .+..|..|.+.+...
T Consensus 80 i~v~i~-G~t~~dfeV~PY~~I~~~~~~~~g~~v~asf~v~~~~~~~~i~~v~l~~~~t 137 (202)
T 4fxt_A 80 IYITVR-GNTVQDIPVTPYFFVRNVSFAKNGNKITARFTINKVVANANMENVGIYLGTG 137 (202)
T ss_dssp EEEEES-SSEECCEECCBSEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEEESS
T ss_pred EEEEEC-CCeEEeEEEeeeEEEecceEEccCCEEEEEEEEEeccCCCCeeEEEEEEEcC
Confidence 455553 3322 2222222 33344444332 256677777666543
No 214
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=43.83 E-value=14 Score=34.75 Aligned_cols=48 Identities=15% Similarity=0.333 Sum_probs=36.1
Q ss_pred ccceeEEEEE-ecccccccccccCC-C-ceEEEEe--eecceEEEEEcCC-CCC
Q 000982 50 DYSHVTVELR-TLDGLVKESTQCAP-N-GYYFIPV--YDKGSFVIKVNGP-EGW 97 (1201)
Q Consensus 50 ~lsgv~V~L~-~~~G~~~~~t~t~~-n-G~y~i~~--l~~G~Y~l~~~~P-~G~ 97 (1201)
++..++|++. +..|+++++-.... . .++.|++ +.+|.|.|++... .+|
T Consensus 47 ~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~~~~ 100 (108)
T 3d33_A 47 PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGH 100 (108)
T ss_dssp CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCE
T ss_pred cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCCCCE
Confidence 5669999999 67799988865533 3 4666655 5799999999887 544
No 215
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.52 E-value=40 Score=30.89 Aligned_cols=25 Identities=40% Similarity=0.470 Sum_probs=21.0
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|+||+|++.|.|++++...
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 2ee2_A 72 QEYSARLENLLPDTQYFIEVGACNS 96 (119)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEECS
T ss_pred CEeEEEECCCCCCCEEEEEEEEEcC
Confidence 3458999999999999999998543
No 216
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=43.50 E-value=26 Score=32.71 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=31.1
Q ss_pred ecCCCCCceeEEEeeccc-ce-e--ee-eeecCCCceEeecccCCceEEEEEEEec
Q 000982 955 LSGQPKDGVSVEARSESK-GY-Y--EE-TVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 955 ~~g~p~~gv~v~~~~~~~-~~-~--~~-~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.+|.|+.+-.|+....+. .. . .. .+.-..-.|.|.||.|++.|.|++.+..
T Consensus 33 ~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n 88 (122)
T 2e3v_A 33 TGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 88 (122)
T ss_dssp C--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEe
Confidence 456667777777654321 11 0 10 1112345799999999999999999753
No 217
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=43.34 E-value=12 Score=34.58 Aligned_cols=24 Identities=25% Similarity=0.235 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..=+|.|.||+||+.|.|++.+..
T Consensus 57 ~~t~~~i~gL~PgT~Y~~~V~A~~ 80 (104)
T 2dle_A 57 SEPRAVIPGLRSSTFYNITVCPVL 80 (104)
T ss_dssp SSSEEECCSCCSSCEEEEEEEEES
T ss_pred CCCEEEECCCCCCCEEEEEEEEEE
Confidence 345799999999999999999863
No 218
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=43.11 E-value=35 Score=31.02 Aligned_cols=46 Identities=22% Similarity=0.253 Sum_probs=28.8
Q ss_pred CCCceeEEEeecccceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+.... ....-..-.|.|.||.|++.|.+++++..
T Consensus 47 ~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 92 (116)
T 1x5g_A 47 EIQNYKLYYMEKGTDKE-QDVDVSSHSYTINGLKKYTEYSFRVVAYN 92 (116)
T ss_dssp CCSEEEEEEEETTCCCC-CCEEECSSEEEECSCCTTCEEEEEEEEEC
T ss_pred cccEEEEEEEECCCCcc-EEEecCCceEEEcCCCCCCEEEEEEEEEc
Confidence 45555555543321111 11122356899999999999999999753
No 219
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.77 E-value=36 Score=30.76 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.1
Q ss_pred CceEeecccCCceEEEEEEEecC
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
-.|.|+||.|++.|.++|++...
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~ 86 (109)
T 2e7h_A 64 NRAELRGLKRGASYLVQVRARSE 86 (109)
T ss_dssp SEEEEESCCTTSCEEEEEEEECS
T ss_pred CEEEECCCCCCCeEEEEEEEEeC
Confidence 38999999999999999998543
No 220
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=42.54 E-value=25 Score=32.09 Aligned_cols=21 Identities=38% Similarity=0.578 Sum_probs=19.1
Q ss_pred eEeecccCCceEEEEEEEecC
Q 000982 986 YRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 986 ~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
|.|+||.||+.|.++|++...
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~ 84 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTP 84 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEECC
Confidence 999999999999999998643
No 221
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=42.52 E-value=1e+02 Score=38.09 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=72.1
Q ss_pred EEEEEecCCCCCCCceeEEEeecCCCcccCccccCCceeeeccccCccccchhhhhhcccCC-Cc-------ee--EecC
Q 000982 861 SVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSP-PA-------QA--IELG 930 (1201)
Q Consensus 861 ~v~v~~~~~~~~pL~~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~Y~~~~~~key~~~p-~~-------~~--i~v~ 930 (1201)
.+.+.|.. ..-+++.+.++|.+.++-+--..|+.+|.+.|..|.||.|.++.--.+..-.+ +. -. +-++
T Consensus 451 ~v~vtd~~-~~~~~~~~~v~l~~~~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (671)
T 1r6v_A 451 QVVVTDAK-GNFGVPTVFVSMMRDNGSCYYAKTGPDGIARFPHIDSGTYDIFVGGPDHWDRALAPYDGESIPGGYAIALR 529 (671)
T ss_dssp EEEEECTT-SCSBCTTEEEEEECSSSCCEEEECCTTSEEEEEEEECEEEEEEEEEECCCSCCSCTTTSCCCCCSCSSCSC
T ss_pred EEEEecCC-CCcCcceeEEEEecCCCceEecccCCCCceeeeccCceEEEEEEecccccCCCccccccccCCceeeeccc
Confidence 45666553 23457778889988754222335778999999999999998764322222111 10 00 1111
Q ss_pred CCcceeEEEEEE---------EEEEeeeeeEEeecCCCC--CceeEEEeeccc-ceeeeeeecCCCceEeecccCCceEE
Q 000982 931 SGESREVIFQAT---------RVAYSATGTITLLSGQPK--DGVSVEARSESK-GYYEETVTDTSGSYRLRGLHPDTTYV 998 (1201)
Q Consensus 931 ~G~~~~v~~~~~---------r~~~s~~G~V~~~~g~p~--~gv~v~~~~~~~-~~~~~~~Td~~G~~~i~gL~pg~~y~ 998 (1201)
.-+...-.|.+. ...|+-.=+| .+...+. ..+.+-..+..+ ..++.....+|++|.++-+ ||. |.
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 606 (671)
T 1r6v_A 530 MAEERQASFVGFGVSPDATQLNVNFNSTLQV-KFSTNLSTLKDPQFVVVDPLLRGVYGRVAYARNQTYDLSLL-SGQ-IS 606 (671)
T ss_dssp GGGCCEEEEEEEEEBTTBCEEEEECCCCEEE-EECCCCTTSSSCEEEEECTTCSCEEEEEECCTTCEEECTTC-EEE-EE
T ss_pred hhhhcccccccccccccceEEEEEEeeEEEE-EecCcCCCCCCceEEEecCccccceEEeeeccCCceEeEec-CCe-EE
Confidence 111222223331 1122221111 2333333 344444444432 3455567788999999955 895 55
Q ss_pred EEEE
Q 000982 999 IKVV 1002 (1201)
Q Consensus 999 v~~~ 1002 (1201)
|++.
T Consensus 607 ~~~~ 610 (671)
T 1r6v_A 607 FGIQ 610 (671)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5654
No 222
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=42.02 E-value=48 Score=30.14 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=29.8
Q ss_pred eeEEEeccCCCeeee--eeecCccceeee-----eecCcceeeeccCC
Q 000982 151 VNVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP 191 (1201)
Q Consensus 151 v~V~L~~~~g~~i~s--ttTd~~G~f~F~-----~l~PG~Y~l~~~~~ 191 (1201)
+.|+|.+.+|..+.. ..++.+|.|.+. +.+.|.|+|.+...
T Consensus 38 ~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 38 PLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp EEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred eEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 478899999976654 556788887664 23568999998654
No 223
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.65 E-value=35 Score=31.17 Aligned_cols=23 Identities=26% Similarity=0.457 Sum_probs=20.2
Q ss_pred CCceEeecccCCceEEEEEEEec
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.-.|.|.||.|++.|.+++++..
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEc
Confidence 55799999999999999999753
No 224
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.60 E-value=46 Score=30.04 Aligned_cols=47 Identities=13% Similarity=0.195 Sum_probs=30.6
Q ss_pred CCCceeEEEeecc----cceeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 959 PKDGVSVEARSES----KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 959 p~~gv~v~~~~~~----~~~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
++.+-.|+....+ .........-..-.|.|++|.|++.|.+++++..
T Consensus 40 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 2ede_A 40 KITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARN 90 (114)
T ss_dssp CCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred ceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEEe
Confidence 4555555554322 1112333445566899999999999999999854
No 225
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=41.31 E-value=30 Score=31.11 Aligned_cols=25 Identities=28% Similarity=0.573 Sum_probs=21.2
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|+||.|++.|.+++.+...
T Consensus 61 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 85 (108)
T 2djs_A 61 QTNTARIDGLRPGMVYVVQVRARTV 85 (108)
T ss_dssp SSSEEEEESCCTTCEEEEEEEEEES
T ss_pred CccEEEEcCCCCCCEEEEEEEEEeC
Confidence 4567999999999999999997543
No 226
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=40.94 E-value=33 Score=31.43 Aligned_cols=25 Identities=20% Similarity=0.464 Sum_probs=20.9
Q ss_pred CCCceEeecccCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
..-.|.|.||.||+.|.+++.+...
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~ 98 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVND 98 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEES
T ss_pred CccEEEECCcCCCCEEEEEEEEEcC
Confidence 3457999999999999999997543
No 227
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=40.19 E-value=2.3e+02 Score=33.91 Aligned_cols=113 Identities=17% Similarity=0.098 Sum_probs=53.7
Q ss_pred CCCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEecc-Cc-cccceEEEeeccceeEEEEEeeccc-hhccc
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGS-GD-IKGLDFLVFEQPEKTILSGHVEGNR-IKELN 1058 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~-~d-~~~~~f~~~~~~~~~~i~g~V~~~~-~~~~~ 1058 (1201)
..-.+.|.||.|+..|.+++.+....|... + .|.+..+.+.. .+ -.++...... ... |...=.... .....
T Consensus 398 ~~ts~tI~gL~P~T~Y~frV~A~N~~G~~s-p--s~~s~~v~v~T~~~~Ps~~~~~~~s-~tS--V~LsW~pP~~~ng~I 471 (536)
T 3fl7_A 398 TRTSVTVSDLEPHMNYTFTVEARNGVSGLV-T--SRSFRTASVSINQTEPPKVRLEGRS-TTS--LSVSWSIPPPQQSRV 471 (536)
T ss_dssp CSSEEEEECCCTTCEEEEEEEEECTTGGGC-S--CCCEEEEEEECCSCCCCEEEEEECC-C-C--CEEEEECCTTTTTTC
T ss_pred ccceeEeCCCCCCCEEEEEEEEEecCCCCC-C--CCccceeEEeecccCCCCCceeecc-CCe--EEEEEECCcCCCCcc
Confidence 456799999999999999999864322110 0 23344443321 11 1122111110 111 111111110 00112
Q ss_pred cceEEEEeccCCccceeEEEeeccccceeecCCCCc-ceeeEecc
Q 000982 1059 SHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1102 (1201)
Q Consensus 1059 ~~l~v~l~~~~~~~~~~~~~~~~~~~~f~~~~l~~~-~y~v~~~s 1102 (1201)
....|..+..+.. ...... -.....|.+..|.++ .|.+++..
T Consensus 472 ~~Y~V~y~~~~~~-~~~~~v-~~~~ts~~l~gL~P~T~Y~frVrA 514 (536)
T 3fl7_A 472 WKYEVTYRKKGDS-NSYNVR-RTEGFSVTLDDLAPDTTYLVQVQA 514 (536)
T ss_dssp SEEEEEEEEC--C-CCCEEE-EESSSEEECCSCCSSCEEEEEEEE
T ss_pred cEEEEEEEECCCC-ceEEEE-cCCCCEEEECCCCCCCEEEEEEEE
Confidence 3445555443222 122212 234567899999998 78888774
No 228
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=40.13 E-value=29 Score=31.73 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=20.3
Q ss_pred CCceEeecccCCceEEEEEEEec
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.-.|.|.||+||..|.|+|++..
T Consensus 66 ~~~~~l~~L~p~t~Y~~~VRa~~ 88 (109)
T 1uc6_A 66 GTAHTITDAYAGKEYIIQVAAKD 88 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCB
T ss_pred CCEEEEeCCCCCCEEEEEEEEEe
Confidence 45899999999999999999753
No 229
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=40.11 E-value=28 Score=33.99 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=28.8
Q ss_pred CCcceeEEEeccCCCeeeeee--ecCccceeee--e-------ecCcceeeecc
Q 000982 147 GPSNVNVELLSHSGDLISSVI--TSSEGSYLFK--N-------IIPGKYKLRAS 189 (1201)
Q Consensus 147 plaGv~V~L~~~~g~~i~stt--Td~~G~f~F~--~-------l~PG~Y~l~~~ 189 (1201)
+...++|++++.+|+.+++.. ..+.|.+.|. . ++||.|++++.
T Consensus 37 ~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~ 90 (138)
T 3c12_A 37 SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITAT 90 (138)
T ss_dssp SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEE
Confidence 445688888888888776543 3455665554 1 67788877764
No 230
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.52 E-value=25 Score=33.05 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=21.0
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..-.|.|+||.|++.|.|++.+..
T Consensus 78 ~~~~~~~i~~L~p~t~Y~~~V~A~n 102 (126)
T 1x5i_A 78 YKQRYYTIENLDPSSHYVITLKAFN 102 (126)
T ss_dssp TTCCEEEECSCCSSCEECCEEEEEC
T ss_pred CCeeEEEEeCCCCCCEEEEEEEEEe
Confidence 3445799999999999999999753
No 231
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.43 E-value=41 Score=31.06 Aligned_cols=22 Identities=32% Similarity=0.327 Sum_probs=19.6
Q ss_pred CCceEeecccCCceEEEEEEEe
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
.=.|.|.||.|+..|.|++.+-
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~ 80 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCL 80 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEE
T ss_pred cCEEEcCCCCCCCEEEEEEEEE
Confidence 3479999999999999999975
No 232
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=39.42 E-value=16 Score=33.57 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=19.4
Q ss_pred CceEeecccCCceEEEEEEEec
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
=.|.|+||.|++.|.|++.+-.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred eEEEcCCCCCCCEEEEEEEEEc
Confidence 3599999999999999999753
No 233
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=39.31 E-value=33 Score=33.40 Aligned_cols=43 Identities=30% Similarity=0.518 Sum_probs=28.7
Q ss_pred CCcceeEEEeccCCCeeeeeee--cCccceee--e-------eecCcceeeecc
Q 000982 147 GPSNVNVELLSHSGDLISSVIT--SSEGSYLF--K-------NIIPGKYKLRAS 189 (1201)
Q Consensus 147 plaGv~V~L~~~~g~~i~sttT--d~~G~f~F--~-------~l~PG~Y~l~~~ 189 (1201)
+...++|++++.+|+.+++..- -+.|.+.| + .++||.|++++.
T Consensus 35 ~a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~ 88 (138)
T 3osv_A 35 SSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQ 88 (138)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEE
T ss_pred CCcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEE
Confidence 4557889999988987766432 35564444 2 377888887663
No 234
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.10 E-value=48 Score=30.28 Aligned_cols=25 Identities=36% Similarity=0.533 Sum_probs=21.1
Q ss_pred cCCCceEeecccCCceEEEEEEEec
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-..-.|.|.||.|++.|.|++.+..
T Consensus 71 ~~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 71 NVTLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp SSCCEEEEESCCTTCEEEEEEEEEC
T ss_pred CCceEEEEcCCCCCCEEEEEEEEEc
Confidence 3455799999999999999999753
No 235
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.84 E-value=21 Score=32.49 Aligned_cols=27 Identities=26% Similarity=0.613 Sum_probs=21.4
Q ss_pred CCCceEeecccCCceEEEEEEEecCCC
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKDGFG 1008 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~~~~ 1008 (1201)
.--.|.|+||+||..|..++-+...+|
T Consensus 59 h~nSYtI~GL~P~~~YE~qv~S~~ryG 85 (98)
T 1oww_A 59 HLNSYTIKGLKPGVVYEGQLISIQQYG 85 (98)
T ss_dssp SCCEEEECSCCSSEEEEEEEEEEESSS
T ss_pred ccceEEEecCCCCcEEEEEEEEeeccC
Confidence 445699999999999999998754433
No 236
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.76 E-value=20 Score=33.85 Aligned_cols=24 Identities=25% Similarity=0.490 Sum_probs=20.7
Q ss_pred CCceEeecccCCceEEEEEEEecC
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.-.|.|+||.||+.|.++|++...
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~ 102 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQ 102 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEES
T ss_pred CCeEEECCCCCCCEEEEEEEEEeC
Confidence 447999999999999999998644
No 237
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.38 E-value=31 Score=30.50 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=24.6
Q ss_pred eeeeeecCCCceEeecccCCceEEEEEEEe
Q 000982 975 YEETVTDTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 975 ~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
.|-..-...-.|.|.||+||..|.+++.+-
T Consensus 29 Kev~IPgh~nSYtIsGLkPGvtYegQLisV 58 (89)
T 1q38_A 29 KEATIPGHLNSYTIKGLKPGVVYEGQLISI 58 (89)
T ss_dssp EEEEECSSSSCCCCCCCCTTCCEEEEEEEE
T ss_pred EEEEcCCccceEEEeccCCCcEEEEEEEee
Confidence 455556667889999999999999999863
No 238
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.89 E-value=54 Score=30.41 Aligned_cols=27 Identities=19% Similarity=0.620 Sum_probs=22.2
Q ss_pred eecCCCceEeecccCCceEEEEEEEec
Q 000982 979 VTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 979 ~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-..-.|.|+||.|++.|.+++.+..
T Consensus 80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n 106 (130)
T 1wfo_A 80 LAPSARQYTATGLKPESVYLFRITAQT 106 (130)
T ss_dssp ECTTCCEEEEESCCSSSEEEEEEEEEC
T ss_pred eCCCceEEEEcCCCCCCEEEEEEEEEe
Confidence 334566899999999999999999753
No 239
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=37.16 E-value=6.2e+02 Score=30.42 Aligned_cols=55 Identities=24% Similarity=0.315 Sum_probs=35.5
Q ss_pred eeEEeecCCCCCceeEEEeec--c-----cceeeeeeecCCCceEeecccCCc--eEEEEEEEe
Q 000982 950 GTITLLSGQPKDGVSVEARSE--S-----KGYYEETVTDTSGSYRLRGLHPDT--TYVIKVVKK 1004 (1201)
Q Consensus 950 G~V~~~~g~p~~gv~v~~~~~--~-----~~~~~~~~Td~~G~~~i~gL~pg~--~y~v~~~~~ 1004 (1201)
=.+...+|+|++++.+++.-. . .......++|.+|.+.+.=..|.. .|.++++..
T Consensus 369 v~v~~~dG~P~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~ 432 (656)
T 4fxk_A 369 ALVREMSGSPASGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSAG 432 (656)
T ss_dssp EEEECSSSSCCCSCCEEEEEEEECGGGCEEEEEEEECCCTTSEEEECCBCCTTCSEEEEEEEES
T ss_pred EEEECCCCCCCCCceEEEEEEEeccceEEeeeEEEEEecCCceEEEEEeCCCCCcEEEEEEEeC
Confidence 345678999999988876421 1 112345668899988887655643 456666543
No 240
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=36.13 E-value=81 Score=33.96 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.6
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.|++++..
T Consensus 258 ~~~~~~l~~L~p~t~Y~~rV~A~n 281 (303)
T 1i1r_A 258 TRSSFTVQDLKPFTEYVFRIRCMK 281 (303)
T ss_dssp CCSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEecc
Confidence 345799999999999999999753
No 241
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=35.98 E-value=65 Score=28.96 Aligned_cols=23 Identities=26% Similarity=0.283 Sum_probs=19.9
Q ss_pred CCCceEeecccCCceEEEEEEEe
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
..-.+.|.||.|++.|.|++.+-
T Consensus 63 ~~~~~~l~~L~p~t~Y~v~V~A~ 85 (102)
T 3n1f_C 63 SKQWHMIGHLQPETSYDIKMQCF 85 (102)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEE
T ss_pred CceEEECCCCCCCCEEEEEEEEE
Confidence 34479999999999999999974
No 242
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=34.73 E-value=38 Score=30.87 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=30.5
Q ss_pred eeEEEEEeccccccccc--ccCCCceEE--EEe---eecceEEEEEcCCC
Q 000982 53 HVTVELRTLDGLVKEST--QCAPNGYYF--IPV---YDKGSFVIKVNGPE 95 (1201)
Q Consensus 53 gv~V~L~~~~G~~~~~t--~t~~nG~y~--i~~---l~~G~Y~l~~~~P~ 95 (1201)
-++|+|.|++|+.+.+. .++.+|.|. +++ ...|.|.|++....
T Consensus 37 ~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 37 IPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp EEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 46899999999887763 334577665 443 34699999887654
No 243
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.67 E-value=36 Score=31.29 Aligned_cols=24 Identities=25% Similarity=0.343 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.|++.+..
T Consensus 78 ~~~~~~i~~L~p~t~Y~~~V~A~n 101 (125)
T 1uen_A 78 SKTHGMLPGLEPFSHYTLNVRVVN 101 (125)
T ss_dssp SCSEEEEESCCSSCEEEEEEEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEec
Confidence 456899999999999999999753
No 244
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.65 E-value=22 Score=33.56 Aligned_cols=23 Identities=39% Similarity=0.580 Sum_probs=20.5
Q ss_pred CCceEeecccCCceEEEEEEEec
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.-.|.|.||.|++.|.++|++..
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n 99 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTK 99 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECC
T ss_pred ceEEEecCCCCCCEEEEEEEEeC
Confidence 56899999999999999999753
No 245
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.40 E-value=38 Score=31.57 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=33.1
Q ss_pred cCCCCCceeEEEeec----ccceeeeee---ecCCCceEeecccCCceEEEEEEEecC
Q 000982 956 SGQPKDGVSVEARSE----SKGYYEETV---TDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~----~~~~~~~~~---Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
+|.++.+-.|+.... ......-.. .-..-.|.|.||.|++.|.+++.+...
T Consensus 44 ~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~ 101 (124)
T 1wis_A 44 GKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNI 101 (124)
T ss_dssp CSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECS
T ss_pred CCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEEC
Confidence 356777777777641 122211111 234558999999999999999997543
No 246
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.28 E-value=22 Score=32.68 Aligned_cols=22 Identities=23% Similarity=0.249 Sum_probs=19.7
Q ss_pred CceEeecccCCceEEEEEEEec
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
-.|.|.||.|++.|.|++.+..
T Consensus 78 ~~~~i~~L~p~t~Y~~~V~A~n 99 (122)
T 1va9_A 78 EVYTLDNLKKFAQYGVVVQAFN 99 (122)
T ss_dssp EEEEEESCCSSCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEc
Confidence 5799999999999999999753
No 247
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.27 E-value=30 Score=31.57 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.+++.+..
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ed7_A 72 GSLQLTVGNLKPEAMYTFRVVAYN 95 (119)
T ss_dssp TCCEEEECSCCSSSEEEECCEEEE
T ss_pred CceEEEeCCCCCCCEEEEEEEEEc
Confidence 356799999999999999999753
No 248
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.73 E-value=31 Score=32.03 Aligned_cols=50 Identities=26% Similarity=0.359 Sum_probs=33.5
Q ss_pred cCCCCCceeEEEeecccc--eeeeeeecCCCceEeecccCCceEEEEEEEec
Q 000982 956 SGQPKDGVSVEARSESKG--YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 956 ~g~p~~gv~v~~~~~~~~--~~~~~~Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.+.|+.|-.|+.+..+.. ...+...-..=.|.|++|.||+.|.++|.+-.
T Consensus 33 ~~~~I~gY~vey~~~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n 84 (108)
T 1v5j_A 33 VPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA 84 (108)
T ss_dssp CSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred CCCCCcEEEEEEEeCCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 356788888887753221 11122222345799999999999999999753
No 249
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=32.76 E-value=1.9e+02 Score=30.68 Aligned_cols=42 Identities=19% Similarity=0.423 Sum_probs=35.0
Q ss_pred CCcceeeEEEEEcCcccccccCCc-eeeeeeeecce-eEEeeee
Q 000982 336 NDMGVEGVKILVDGHERSITDRDG-YYKLDQVTSNR-YTIEAVK 377 (1201)
Q Consensus 336 ~G~pl~Ga~V~l~G~~~~~TDadG-~y~~~~L~pG~-Y~I~~~~ 377 (1201)
++.+|.+-+++-+|+.++..+.++ .|.+.+|.|.+ |++++.+
T Consensus 176 ~~~GI~gY~ly~~g~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 176 TTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp CCTTEEEEEEEETTEEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCCceeEEEEeCCceeEEeeccceEEEecCCCCCCEEEEEEEE
Confidence 455699999998998877788877 89999999987 8877765
No 250
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=32.74 E-value=48 Score=30.23 Aligned_cols=52 Identities=25% Similarity=0.309 Sum_probs=36.8
Q ss_pred EEeeeeeEEeecCCCCC-ceeEEEeecccceeeeeeecCCCceEeecccCCceEEEE
Q 000982 945 AYSATGTITLLSGQPKD-GVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIK 1000 (1201)
Q Consensus 945 ~~s~~G~V~~~~g~p~~-gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~pg~~y~v~ 1000 (1201)
.+.+.=+++.-+|+|++ |+.|. +.++ ........+|+..++||.+...-.|+
T Consensus 7 G~~~ll~l~~~dG~plPfGA~V~--d~~g--~~~giVG~~G~vyl~gl~~~g~L~V~ 59 (94)
T 3l48_A 7 GKRLFAILRLADGSQPPFGASVT--SEKG--RELGMVADEGLAWLSGVTPGETLSVN 59 (94)
T ss_dssp CCCEEEEEEETTSCCCCTTCEEE--CTTC--CEEEEBCGGGEEEESSCCTTCEEEEE
T ss_pred EEEEEEEEECCCCCcCCCccEEE--cCCC--ceEEEECCCCEEEEECCCCCCEEEEE
Confidence 34455567778999988 88773 3322 24578999999999999888654433
No 251
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=32.07 E-value=44 Score=31.37 Aligned_cols=51 Identities=12% Similarity=0.220 Sum_probs=36.8
Q ss_pred CCCCcceeEEEe-ccCCCeee-eeeecCccc---eeeeeecCcceeeeccCC-CcEE
Q 000982 145 GGGPSNVNVELL-SHSGDLIS-SVITSSEGS---YLFKNIIPGKYKLRASHP-NLSV 195 (1201)
Q Consensus 145 g~plaGv~V~L~-~~~g~~i~-sttTd~~G~---f~F~~l~PG~Y~l~~~~~-g~~~ 195 (1201)
..++..|+|++. +..|+++. ...+.+.|. +.+.+..+|.|.|...+. +..+
T Consensus 45 ~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~~~~l 101 (108)
T 3d33_A 45 ASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHL 101 (108)
T ss_dssp SSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEE
T ss_pred CCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCCCCEE
Confidence 479999999999 67787764 445555444 345566799999998776 5544
No 252
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=32.06 E-value=84 Score=33.70 Aligned_cols=56 Identities=20% Similarity=0.344 Sum_probs=40.1
Q ss_pred eEEeeeeeeeEEeeC-CCcce------eeEEEEE--cC--c----c-cccccCCceeeeeeeecceeEEeee
Q 000982 321 FQVTGFSVGGRVVDE-NDMGV------EGVKILV--DG--H----E-RSITDRDGYYKLDQVTSNRYTIEAV 376 (1201)
Q Consensus 321 f~~~g~sv~G~V~d~-~G~pl------~Ga~V~l--~G--~----~-~~~TDadG~y~~~~L~pG~Y~I~~~ 376 (1201)
+..+...+.|+|+|. +|++| .|++|.| .| . . -.....||.|+=..|=.|+|.|...
T Consensus 5 YDeP~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 5 YEEPSETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp ---CCEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred CCCCcceeEEEEEECCCCCEeeeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence 444456789999996 67776 3588888 11 1 1 2367899999977899999999987
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=31.89 E-value=30 Score=43.43 Aligned_cols=40 Identities=20% Similarity=0.369 Sum_probs=29.4
Q ss_pred cCCcceeecccCCcceEEEEeecCCccccCCCceeee--eeeeeeeecc
Q 000982 533 DDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWE--QSFIGVDVGT 579 (1201)
Q Consensus 533 d~~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~cw~--~~~~~v~V~~ 579 (1201)
..+.+..|++|+||+|+++++++ ...-.|. ..++.|.|.+
T Consensus 741 ~~~~~~~ytnL~pG~Y~f~V~a~-------n~~g~w~~~~~~l~i~I~P 782 (795)
T 4a2l_A 741 TDSRTVSYSNLPQGTYQFLVKAA-------NSDGKWNPIPTALEIIVLP 782 (795)
T ss_dssp SSCCEEEEECCCSEEEEEEEEEE-------CTTSCBCSSCEEEEEEECC
T ss_pred CCcCeEEecccCCCeEEEEEEEE-------CCCCccCCCceEEEEEEEC
Confidence 45678899999999999999976 3334453 4556777764
No 254
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=31.20 E-value=68 Score=34.08 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=21.8
Q ss_pred ecCCCceEeecccCCceEEEEEEEecC
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.-..-.|.|.||.||..|.|++.+-..
T Consensus 249 ~~~~~~~~~~~L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 249 DSSHTEYTLSSLTSDTLYMVRMAAYTD 275 (290)
T ss_dssp ETTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCceEEEeCCCCCCCEEEEEEEEEeC
Confidence 334458999999999999999997543
No 255
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=30.69 E-value=19 Score=33.38 Aligned_cols=23 Identities=35% Similarity=0.574 Sum_probs=20.2
Q ss_pred CCceEeecccCCceEEEEEEEec
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
.-.+.|.||+|++.|.++|++..
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~ 89 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTK 89 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEEC
T ss_pred cCEEEeCCCCCCcEEEEEEEEec
Confidence 45799999999999999999754
No 256
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.54 E-value=28 Score=32.53 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.6
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.|++.+..
T Consensus 77 ~~~~~~i~~L~p~t~Y~~~V~A~n 100 (134)
T 2edx_A 77 EHSSWDLVGLEKWTEYRVWVRAHT 100 (134)
T ss_dssp TCSEEEEESCCTTCEEEEEEEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 456799999999999999999753
No 257
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=30.39 E-value=44 Score=31.01 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=19.4
Q ss_pred ceEeecccCCceEEEEEEEecC
Q 000982 985 SYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 985 ~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
.|.|.||.||+.|.+++.+...
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N~ 93 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVYS 93 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEET
T ss_pred EEEeCCCCCCCEEEEEEEEEeC
Confidence 6899999999999999998543
No 258
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=30.15 E-value=51 Score=34.65 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=52.7
Q ss_pred ccccEEEEEEecCCCCCCCc-----eeEEEeecCCCccc----CccccCCceeeeccccCccccchhhhhhcccC--C-C
Q 000982 856 KLSQISVRIYSKDDAGEPIP-----SVLLSLSGDDGYRN----NSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFS--P-P 923 (1201)
Q Consensus 856 ~l~~i~v~v~~~~~~~~pL~-----~vl~slsg~~~~r~----n~~T~~~G~~~f~~L~PG~Y~~~~~~key~~~--p-~ 923 (1201)
+-+.+..+|+.. |||++ |+.+.|--. +|.. +.....||+|. .-|+.|+|-+++.....-|- | .
T Consensus 9 P~a~l~G~iv~t---GE~i~~~~~~gv~i~l~E~-gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~gnGPf~~~~~d 83 (215)
T 3hn5_A 9 PESMLTGRVMYN---GEALQLRGNEAVQLQLYQH-GYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSGNGPWTSEGRD 83 (215)
T ss_dssp -CEEEEEEEEET---TEECCCCCTTSCEEEEESS-CGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTTCSSBCSTTCC
T ss_pred CCceEEEEEEEC---CCEeeecCCCceEEEEEEc-ccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecCCCCcccCCCC
Confidence 456677777732 67764 366666554 6665 46688999999 89999999998875544444 2 4
Q ss_pred ceeEecCCCcceeEE
Q 000982 924 AQAIELGSGESREVI 938 (1201)
Q Consensus 924 ~~~i~v~~G~~~~v~ 938 (1201)
++.|+|+-..+..++
T Consensus 84 ti~v~i~G~t~~Dfe 98 (215)
T 3hn5_A 84 TINVTVAGNTVQDVE 98 (215)
T ss_dssp CEEEEESSSEECCEE
T ss_pred eEEEEECCCeEEeEE
Confidence 577888655444444
No 259
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=29.89 E-value=28 Score=32.95 Aligned_cols=22 Identities=36% Similarity=0.274 Sum_probs=19.9
Q ss_pred CCceEeecccCCceEEEEEEEe
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
.-.+.|.||.|++.|.|++.+-
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~ 95 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPY 95 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEE
Confidence 4589999999999999999975
No 260
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.78 E-value=37 Score=31.57 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=21.6
Q ss_pred cCCCceEeecccCCceEEEEEEEecC
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
...-.|.|.||.|++.|.|++.+...
T Consensus 76 ~~~~~~~l~~L~p~t~Y~~~V~A~n~ 101 (124)
T 2dbj_A 76 QNGSRARISVQVHNATCTVRIAAVTR 101 (124)
T ss_dssp STTSCEEEECCCSSSEEEECEEEEES
T ss_pred CCcceEEecCCCCCCEEEEEEEEECC
Confidence 34458999999999999999997543
No 261
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.69 E-value=24 Score=32.35 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.|++.+..
T Consensus 74 ~~~~~~i~~L~p~t~Y~~~V~A~n 97 (121)
T 2dlh_A 74 DSQITTIGNLVPQKTYSVKVLAFT 97 (121)
T ss_dssp SCSEECCBSCCSSCEEEEEEEEEE
T ss_pred CceEEEecCCCCCCEEEEEEEEEe
Confidence 456799999999999999999753
No 262
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=29.06 E-value=71 Score=29.47 Aligned_cols=27 Identities=22% Similarity=0.448 Sum_probs=17.0
Q ss_pred eeecCcceeeec---cCCCcEEEEeeeeEEEe
Q 000982 177 KNIIPGKYKLRA---SHPNLSVEVRGSTEVEL 205 (1201)
Q Consensus 177 ~~l~PG~Y~l~~---~~~g~~~~~~~~~~V~v 205 (1201)
..|+||+|+|.. +.+|... +++..|+|
T Consensus 72 ~~L~~G~YtV~WrvvS~DGH~~--~G~~~FtV 101 (102)
T 2c9r_A 72 SPLTAGTYKVDWRAVSSDTFPI--TGSVTFKV 101 (102)
T ss_dssp SCCCSEEEEEEEEECCTTCCCE--EEEEEEEE
T ss_pred CCCCCceEEEEEEEEecCCCcc--CCEEEEEE
Confidence 468999999974 3455443 34555554
No 263
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=29.04 E-value=55 Score=30.34 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=18.5
Q ss_pred CceEeecccCCceEEEEEEEecC
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
-.+.|.||.|++.|.+++.+...
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~ 96 (127)
T 1uey_A 74 QTTAQLNLSPYVNYSFRVMAVNS 96 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEES
T ss_pred ceEEEecCCCCCEEEEEEEEEeC
Confidence 34468899999999999997543
No 264
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=28.77 E-value=5e+02 Score=31.59 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|+||.||..|.+++.+..
T Consensus 221 ~~~~~~i~~L~P~t~Y~frV~A~n 244 (680)
T 1zlg_A 221 TDERVQLTDIRPSRWYQFRVAAVN 244 (680)
T ss_pred CCCeEEeCCCCCCCEEEEEEEEEe
Confidence 456799999999999999999753
No 265
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=28.07 E-value=92 Score=33.40 Aligned_cols=43 Identities=23% Similarity=0.444 Sum_probs=30.8
Q ss_pred ceeEEEEEecc-ccccc---ccccCCCceEEEEeeecceEEEEEcCC
Q 000982 52 SHVTVELRTLD-GLVKE---STQCAPNGYYFIPVYDKGSFVIKVNGP 94 (1201)
Q Consensus 52 sgv~V~L~~~~-G~~~~---~t~t~~nG~y~i~~l~~G~Y~l~~~~P 94 (1201)
.|+.|+|+-.. |.... .--|..+|.|.=..+=+|+|.|....|
T Consensus 32 ~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~Gp 78 (249)
T 4eiu_A 32 EGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRIDGP 78 (249)
T ss_dssp TSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEESS
T ss_pred CceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeCCC
Confidence 46999999643 33212 236788999994445799999988866
No 266
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.99 E-value=33 Score=42.74 Aligned_cols=38 Identities=11% Similarity=0.244 Sum_probs=27.5
Q ss_pred CcceeecccCCcceEEEEeecCCccccCCCceeee--eeeeeeeecc
Q 000982 535 SDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWE--QSFIGVDVGT 579 (1201)
Q Consensus 535 ~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~cw~--~~~~~v~V~~ 579 (1201)
..+..|++|+||+|+++++++ ...-.|. ..++.|.|.+
T Consensus 709 ~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~I~I~P 748 (758)
T 3ott_A 709 INRITYSNLSYGNYQLIISKL-------ERDGQPSNRPHILNIRILP 748 (758)
T ss_dssp CCEEEECSCCSEEEEEEEEEB-------CTTSCBCSSCEEEEEEECC
T ss_pred cceEEecCCCCccEEEEEEEe-------CCCCCccCccEEEEEEECC
Confidence 456899999999999999976 3333444 3456777765
No 267
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=27.96 E-value=49 Score=32.17 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=28.9
Q ss_pred ccceeEEEEEecccccccccc--cCCCceEEEE--e-------eecceEEEEEcC
Q 000982 50 DYSHVTVELRTLDGLVKESTQ--CAPNGYYFIP--V-------YDKGSFVIKVNG 93 (1201)
Q Consensus 50 ~lsgv~V~L~~~~G~~~~~t~--t~~nG~y~i~--~-------l~~G~Y~l~~~~ 93 (1201)
+...++|+++|.+|+++.+-. ..+.|.+.|. . +++|.|++++.+
T Consensus 37 ~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a 91 (138)
T 3c12_A 37 SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQ 91 (138)
T ss_dssp SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEE
Confidence 345899999999999877754 2335654433 2 356777776654
No 268
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=27.59 E-value=28 Score=32.53 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|.||.|++.|.|++.+..
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n 98 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALT 98 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 455799999999999999999753
No 269
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.24 E-value=12 Score=34.18 Aligned_cols=24 Identities=21% Similarity=0.199 Sum_probs=20.7
Q ss_pred CCCceEeecccCCceEEEEEEEec
Q 000982 982 TSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 982 ~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
..-.|.|+||.|++.|.|++.+..
T Consensus 59 ~~~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 59 ARSHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp TSSEEEECSCCSSCCCBCBBCBBC
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEe
Confidence 456899999999999999999753
No 270
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=27.17 E-value=57 Score=29.71 Aligned_cols=52 Identities=21% Similarity=0.308 Sum_probs=33.1
Q ss_pred ccccccccEEEEEEecCCCCCCCc-eeEEEeecCCCcccCccccCCceeeeccccCcc
Q 000982 852 FSCQKLSQISVRIYSKDDAGEPIP-SVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGN 908 (1201)
Q Consensus 852 f~~~~l~~i~v~v~~~~~~~~pL~-~vl~slsg~~~~r~n~~T~~~G~~~f~~L~PG~ 908 (1201)
|...+--.+.+++.+.+ |+||| |+.+.- .++ +...+.+.+|.+.+++|.+..
T Consensus 2 F~t~~G~~~ll~l~~~d--G~plPfGA~V~d--~~g-~~~giVG~~G~vyl~gl~~~g 54 (94)
T 3l48_A 2 FSVLKGKRLFAILRLAD--GSQPPFGASVTS--EKG-RELGMVADEGLAWLSGVTPGE 54 (94)
T ss_dssp -----CCCEEEEEEETT--SCCCCTTCEEEC--TTC-CEEEEBCGGGEEEESSCCTTC
T ss_pred cceEEEEEEEEEEECCC--CCcCCCccEEEc--CCC-ceEEEECCCCEEEEECCCCCC
Confidence 55555556677888875 89999 776642 222 334678999999999987644
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=26.95 E-value=42 Score=41.95 Aligned_cols=41 Identities=24% Similarity=0.558 Sum_probs=29.1
Q ss_pred ecCCcceeecccCCcceEEEEeecCCccccCCCceeee--eeeeeeeecc
Q 000982 532 TDDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWE--QSFIGVDVGT 579 (1201)
Q Consensus 532 Td~~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~cw~--~~~~~v~V~~ 579 (1201)
+..+.+..|++|+||+|+++++++ ...-.|. ..++.|.|.+
T Consensus 734 ~~~~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~i~I~p 776 (781)
T 3v9f_A 734 INEQNSVTFRNIPPGKYEFLVKAR-------LHNQDWSEDTTSLRIHINP 776 (781)
T ss_dssp ESSCSEEEECSCCSEEEEEEEEEE-------ETTSCCCSCCEEEEEEECC
T ss_pred cCCcceEEEcCCCCceEEEEEEEE-------CCCCccCCCceEEEEEEcC
Confidence 355678999999999999999876 3333444 3455666654
No 272
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.90 E-value=28 Score=34.00 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=20.4
Q ss_pred cCCCceEeecccCCceEEEEEEEe
Q 000982 981 DTSGSYRLRGLHPDTTYVIKVVKK 1004 (1201)
Q Consensus 981 d~~G~~~i~gL~pg~~y~v~~~~~ 1004 (1201)
-+.=.++|.||+|++.|.++|.+-
T Consensus 79 g~~ts~~v~~L~P~T~Y~~rV~A~ 102 (137)
T 1wk0_A 79 GEETNITLNDLKPAMDYHAKVQAE 102 (137)
T ss_dssp ESCSEEEECSCCTTCEECEEEEEE
T ss_pred cCccEEEEcCCCCCCEEEEEEEEE
Confidence 344678999999999999999974
No 273
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=26.29 E-value=50 Score=30.52 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=35.1
Q ss_pred ccceeEEEEEec-ccccccccccCCCceEEEEe--eecceEEEEEcCCCCCC
Q 000982 50 DYSHVTVELRTL-DGLVKESTQCAPNGYYFIPV--YDKGSFVIKVNGPEGWS 98 (1201)
Q Consensus 50 ~lsgv~V~L~~~-~G~~~~~t~t~~nG~y~i~~--l~~G~Y~l~~~~P~G~~ 98 (1201)
.+..++|++.+. .|..+++.+-..-..+.|++ -.+|.|+|++....+|.
T Consensus 43 ~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~~L 94 (101)
T 3sd2_A 43 AKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDCLL 94 (101)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCcEE
Confidence 466899999997 59998885332222455544 45899999999888653
No 274
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=26.18 E-value=9.5e+02 Score=29.12 Aligned_cols=112 Identities=10% Similarity=-0.039 Sum_probs=51.7
Q ss_pred CCceEeecccCCceEEEEEEEecCCCcccccccCCceEEEEeccCccccceEEEeeccceeEEEEEeeccchhccccceE
Q 000982 983 SGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLL 1062 (1201)
Q Consensus 983 ~G~~~i~gL~pg~~y~v~~~~~~~~~~~~~~~~~P~~~~v~~~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~ 1062 (1201)
+|.+.|++|.|.+.|..++.+....|.. ...+..+.|.....-......+...+ ..+.|+.......-+.......
T Consensus 222 ~~~l~I~~~~~~d~g~Y~c~A~n~~G~~---~s~~~~l~V~~~P~~~~~p~~~~~~~-~~v~l~w~~~~~~g~~~i~~Y~ 297 (731)
T 2v5y_A 222 IASFNVVNTTKRDAGKYRCMIRTEGGVG---ISNYAELVVKEPPVPIAPPQLASVGA-TYLWIQLNANSINGDGPIVARE 297 (731)
T ss_dssp EEEEEECSCCTTTCEEEEEEEEETTEEE---ECCCEEEEEECCCCBSSCCEEEEECS-SCEEEECCCSSBSSCSCCCEEE
T ss_pred eEEEEEcccccccCeEEEEEEECCCCCc---ceeeEEEEEecCCCCCCCcceeccCC-ceEEEEeCCcccCCCCccEEEE
Confidence 4899999999999776666654322221 12233444443333233333333322 2222322211100001122334
Q ss_pred EEEeccCCccceeEEEeeccccceeecCCCCc-ceeeEec
Q 000982 1063 VEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLR 1101 (1201)
Q Consensus 1063 v~l~~~~~~~~~~~~~~~~~~~~f~~~~l~~~-~y~v~~~ 1101 (1201)
|+.+... ..... ........+.+..|.++ .|.+++.
T Consensus 298 v~~~~~~--~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~ 334 (731)
T 2v5y_A 298 VEYCTAS--GSWND-RQPVDSTSYKIGHLDPDTEYEISVL 334 (731)
T ss_dssp EEEEESS--SSCEE-EEECCSSEEEECSCCTTCEEEEEEE
T ss_pred EEEEECC--CCceE-EeccCcceEEEeCCCCCCEEEEEEE
Confidence 5544421 11222 22233466788888887 6666554
No 275
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=26.11 E-value=80 Score=31.94 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=21.8
Q ss_pred ecCCCceEeecccCCceEEEEEEEec
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
....-.|.|.||.||+.|.|++++..
T Consensus 161 ~~~~~~~~l~~L~p~t~Y~v~Vra~~ 186 (210)
T 3n06_B 161 AGQQTEFKILSLHPGQKYLVQVRCKP 186 (210)
T ss_dssp EETCSEEEECCCCTTCEEEEEEEEEE
T ss_pred ccCceEEEEeccCCCCEEEEEEEEec
Confidence 34456899999999999999999753
No 276
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=23.74 E-value=51 Score=28.50 Aligned_cols=23 Identities=35% Similarity=0.551 Sum_probs=20.0
Q ss_pred CceEeecccCCceEEEEEEEecC
Q 000982 984 GSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 984 G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
-.|.+.||.||..|.+++.+-+.
T Consensus 51 ~~~~~~~L~~~t~Y~~~V~A~n~ 73 (88)
T 1k85_A 51 TTATISGLAADTSYTFTVKAKDA 73 (88)
T ss_dssp SEEEECCCCSSCEEEEEEEEEET
T ss_pred CEEEeCCCCCCCEEEEEEEEEeC
Confidence 57999999999999999998644
No 277
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=23.56 E-value=1.3e+02 Score=27.10 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=29.6
Q ss_pred cEEEEEEeecccCCCCceeeEEEeecCCcceeecccCCcc-eEEEEee
Q 000982 508 LVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGK-YRLEVKR 554 (1201)
Q Consensus 508 ~~~VtL~~~~~~~~~~~~~~~~~~Td~~G~f~f~~L~PG~-Y~v~~~~ 554 (1201)
+-.|.....++. .......+....-++.+.+|.||+ |+|.+.+
T Consensus 35 ~Y~I~y~~~~g~----~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 35 GFRVEYELSEEG----DEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp EEEEEEEETTTC----CCCEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEEEeCCCC----CcceEEECCCCccEEEECCCCCCCEEEEEEEE
Confidence 345555554442 123345566778899999999999 9999975
No 278
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=23.17 E-value=89 Score=31.57 Aligned_cols=27 Identities=26% Similarity=0.425 Sum_probs=22.0
Q ss_pred ecCCCceEeecccCCceEEEEEEEecC
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~~ 1006 (1201)
....=+|.|.||.|++.|.+++.+-..
T Consensus 153 ~~~~t~~~l~gL~p~t~Y~~~V~A~~~ 179 (195)
T 2qbw_A 153 PYSSSTATISGLKPGVDYTITVYAYSD 179 (195)
T ss_dssp ETTCSEEEECSCCTTCEEEEEEEEESS
T ss_pred CCCCCEEEeCCCCCCCEEEEEEEEEeC
Confidence 334467999999999999999998543
No 279
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=23.02 E-value=2e+02 Score=26.56 Aligned_cols=63 Identities=11% Similarity=0.201 Sum_probs=42.1
Q ss_pred eEEeeeEeeeecCccccccCCCCcceeEEEecc-CCCeeeeeeecCccceeee--eecCcceeeeccCCCcEEE
Q 000982 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSH-SGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVE 196 (1201)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~-~g~~i~sttTd~~G~f~F~--~l~PG~Y~l~~~~~g~~~~ 196 (1201)
..|.| ++.-. =..+++.|+|++.+. .|+.+.+-+--.-....++ +-..|.|.|...+..|.+.
T Consensus 30 A~I~n-vlsV~-------F~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~~Lt 95 (101)
T 3sd2_A 30 AILSN-ILNVS-------FGRAKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDCLLE 95 (101)
T ss_dssp EEETT-EEEEE-------ESSCCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTEEEE
T ss_pred EEEeC-EEEEE-------eccCCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCcEEE
Confidence 45777 65431 147999999999987 5887766543333345544 3357899999888877654
No 280
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=22.85 E-value=92 Score=28.79 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCCCc--ceeEEEeccCCCeeee-------eeecCcc------ceeeeeecCcceeeec---cCCCcEEEEeeeeEEEee
Q 000982 145 GGGPS--NVNVELLSHSGDLISS-------VITSSEG------SYLFKNIIPGKYKLRA---SHPNLSVEVRGSTEVELG 206 (1201)
Q Consensus 145 g~pla--Gv~V~L~~~~g~~i~s-------ttTd~~G------~f~F~~l~PG~Y~l~~---~~~g~~~~~~~~~~V~v~ 206 (1201)
.+++. ...|+|.+.+|+.+.. .....++ ...+..|+||+|+|.. +.+|.... ++..|+|.
T Consensus 27 se~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~G~YtV~WrvvS~DGH~~~--G~~~FtV~ 104 (104)
T 1lyq_A 27 SENLTVKFSGAKLTMTGMKGMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPIT--GNYTFTVK 104 (104)
T ss_dssp SSCCCGGGCEEEEEEEEEC---CCCCEECCEEEEECSSTTEEEEEESSCCCSEEEEEEEEECCTTSCCEE--EEEEEEEC
T ss_pred CCCCcccccEEEEECCCCCeeeeccccccccceeecCCCCcEEEEECCCCCCceEEEEEEEEecCCCccC--CEEEEEEC
No 281
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.25 E-value=1.3e+02 Score=27.48 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=25.5
Q ss_pred eeEEEEEeccc--ccccccccCC-CceEE--EEeeecceEEEEEcC
Q 000982 53 HVTVELRTLDG--LVKESTQCAP-NGYYF--IPVYDKGSFVIKVNG 93 (1201)
Q Consensus 53 gv~V~L~~~~G--~~~~~t~t~~-nG~y~--i~~l~~G~Y~l~~~~ 93 (1201)
.++|++..++| ..+.....+. ||.|. +....+|.|.|.++-
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~ 95 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCI 95 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEE
Confidence 36777777665 3333334444 78777 344478888887764
No 282
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=21.08 E-value=84 Score=33.04 Aligned_cols=26 Identities=23% Similarity=0.268 Sum_probs=22.0
Q ss_pred ecCCCceEeecccCCceEEEEEEEec
Q 000982 980 TDTSGSYRLRGLHPDTTYVIKVVKKD 1005 (1201)
Q Consensus 980 Td~~G~~~i~gL~pg~~y~v~~~~~~ 1005 (1201)
...+-+|.|.||+||+.|.|+|++..
T Consensus 191 ~~~~~~~~l~~L~p~t~Y~vqVRa~~ 216 (236)
T 1axi_B 191 PILTTSVPVYSLKVDKEYEVRVRSKQ 216 (236)
T ss_dssp CBSSSEEEEEEEETTSCEEEEEEEEE
T ss_pred ccCCCEEEEeccCCCCEEEEEEEEEE
Confidence 34457899999999999999999763
No 283
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=20.77 E-value=4e+02 Score=26.41 Aligned_cols=25 Identities=12% Similarity=-0.109 Sum_probs=20.8
Q ss_pred CCCceEeecc-cCCceEEEEEEEecC
Q 000982 982 TSGSYRLRGL-HPDTTYVIKVVKKDG 1006 (1201)
Q Consensus 982 ~~G~~~i~gL-~pg~~y~v~~~~~~~ 1006 (1201)
..-.+.|.+| .|++.|.+++.+...
T Consensus 60 ~~~~~~i~~L~~~~t~Y~~~V~A~n~ 85 (215)
T 1bqu_A 60 TPTSCTVDYSTVYFVNIEVWVEAENA 85 (215)
T ss_dssp CTTEEECSSCCCTTSCEEEEEEEEET
T ss_pred CcceEEEcCCccccccEEEEEEEEec
Confidence 3457899999 999999999997543
No 284
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=20.76 E-value=1.8e+02 Score=26.16 Aligned_cols=42 Identities=19% Similarity=0.341 Sum_probs=28.7
Q ss_pred eeeeecCCcceeeceec--ccceeeeeeccccceEEeeCCCceeeEEe
Q 000982 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGENTVFDVSPSLVSMSVR 311 (1201)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--pG~Y~v~~~~~~~~~~~~~~P~~~~vtV~ 311 (1201)
+..+-+.||.|.+.=.| +|.|.|...+.+.+ +..+...+.|.
T Consensus 38 ~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~----I~GSPF~v~V~ 81 (93)
T 2d7n_A 38 PNITDNKDGTITVRYAPTEKGLHQMGIKYDGNH----IPGSPLQFYVD 81 (93)
T ss_dssp CEEEECSSSCEEEEECCSSCEEEEEEEEESSSC----CTTCSEEEEEC
T ss_pred eEEEECCCCEEEEEEEccCCEEEEEEEEECCEe----CCCCCeEEEEe
Confidence 45566789999887776 68999998777654 33444445443
No 285
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=20.42 E-value=1e+02 Score=27.87 Aligned_cols=42 Identities=17% Similarity=0.197 Sum_probs=27.4
Q ss_pred ceeEEEEEecccccccccccCC-CceEEEEe--eecceEEEEEcC
Q 000982 52 SHVTVELRTLDGLVKESTQCAP-NGYYFIPV--YDKGSFVIKVNG 93 (1201)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~i~~--l~~G~Y~l~~~~ 93 (1201)
..+++++.+++|........+. ||.|.+.- -.+|.|.|.++-
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~ 66 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKY 66 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEE
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEE
Confidence 3578888888887654444443 78777322 267888887654
No 286
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=20.21 E-value=2e+02 Score=26.08 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=0.0
Q ss_pred ceeeccccCCcEEEEEEeecccCCCCceeeEEEee-cCCcceeecccC--CcceEEEEeecCCccccCCCceeeeeeeee
Q 000982 498 NVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLT-DDSDQFLFRDVL--PGKYRLEVKRTSREASSMEDNWCWEQSFIG 574 (1201)
Q Consensus 498 ~V~~~~~~~~~~~VtL~~~~~~~~~~~~~~~~~~T-d~~G~f~f~~L~--PG~Y~v~~~~~~~~~~~~~~~~cw~~~~~~ 574 (1201)
+|.+.+.-...+.|.+...++. .....+. ..+|+|.+.=.+ +|.|+|.+. -.+--...++..
T Consensus 30 ~V~~~~aG~~~l~v~i~~~~g~------~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~---------~~g~~V~gSPf~ 94 (100)
T 3rgh_A 30 QVDCSSAGSAELTIEICSEAGL------PAEVYIQDHGDGTHTITYIPLCPGAYTVTIK---------YGGQPVPNFPSK 94 (100)
T ss_dssp EEECTTSCSCCEEEEEECTTSC------BCEEEEEECSSSEEEEEEECCSSEEEEEEEE---------ETTEECTTCSEE
T ss_pred EEEECCCCCceEEEEEECCCCC------EeEEEEEeCCCCEEEEEEEeCCCeeEEEEEE---------ECCEECCCCCEE
Q ss_pred eeeccC
Q 000982 575 VDVGTN 580 (1201)
Q Consensus 575 v~V~~~ 580 (1201)
+.|.+.
T Consensus 95 v~V~p~ 100 (100)
T 3rgh_A 95 LQVEPA 100 (100)
T ss_dssp EEEECC
T ss_pred EEEeCC
Done!