Query 000993
Match_columns 1196
No_of_seqs 730 out of 4284
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 12:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000993.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000993hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1035 eIF-2alpha kinase GCN2 100.0 8.6E-90 1.9E-94 835.8 56.0 1080 33-1185 49-1350(1351)
2 COG0124 HisS Histidyl-tRNA syn 100.0 9.4E-75 2E-79 671.0 39.5 408 739-1184 5-427 (429)
3 KOG1936 Histidyl-tRNA syntheta 100.0 1.1E-73 2.5E-78 628.4 36.4 429 737-1186 59-516 (518)
4 PLN02972 Histidyl-tRNA synthet 100.0 7.3E-72 1.6E-76 677.1 47.2 418 737-1186 326-761 (763)
5 PLN02530 histidine-tRNA ligase 100.0 1.7E-67 3.7E-72 634.9 42.4 404 739-1177 71-486 (487)
6 PRK12420 histidyl-tRNA synthet 100.0 4.4E-65 9.6E-70 607.0 40.9 402 739-1177 5-422 (423)
7 CHL00201 syh histidine-tRNA sy 100.0 3.5E-63 7.6E-68 589.9 40.9 402 739-1193 5-426 (430)
8 PRK12292 hisZ ATP phosphoribos 100.0 1.2E-60 2.6E-65 562.6 40.9 360 739-1143 4-378 (391)
9 PRK12421 ATP phosphoribosyltra 100.0 3.7E-58 8E-63 539.1 41.2 362 739-1152 8-384 (392)
10 TIGR00442 hisS histidyl-tRNA s 100.0 3.1E-57 6.7E-62 537.2 39.7 380 740-1167 2-397 (397)
11 PRK00037 hisS histidyl-tRNA sy 100.0 1.3E-56 2.9E-61 534.5 37.5 381 739-1185 5-411 (412)
12 TIGR00443 hisZ_biosyn_reg ATP 100.0 1.2E-52 2.6E-57 481.3 32.1 300 745-1079 1-313 (314)
13 PRK12295 hisZ ATP phosphoribos 100.0 7.9E-52 1.7E-56 480.5 33.2 305 753-1077 5-370 (373)
14 PF13393 tRNA-synt_His: Histid 100.0 1.4E-50 3E-55 465.3 28.1 297 743-1074 1-311 (311)
15 PRK12293 hisZ ATP phosphoribos 100.0 1.5E-48 3.2E-53 437.5 30.2 269 739-1079 6-280 (281)
16 COG3705 HisZ ATP phosphoribosy 100.0 1.9E-47 4.2E-52 434.4 26.1 368 739-1152 4-381 (390)
17 KOG0615 Serine/threonine prote 100.0 1.8E-47 4E-52 423.0 18.1 261 379-695 170-446 (475)
18 KOG0598 Ribosomal protein S6 k 100.0 1.3E-46 2.8E-51 415.2 22.2 263 378-698 22-293 (357)
19 KOG0575 Polo-like serine/threo 100.0 4.1E-46 9E-51 431.8 25.4 252 381-691 18-274 (592)
20 KOG0581 Mitogen-activated prot 100.0 2.7E-46 5.8E-51 412.7 21.3 258 377-694 75-343 (364)
21 cd00773 HisRS-like_core Class 100.0 1.9E-45 4.2E-50 411.6 27.6 249 751-1078 1-260 (261)
22 KOG0595 Serine/threonine-prote 100.0 4.3E-45 9.3E-50 405.6 22.0 259 378-693 7-275 (429)
23 KOG0616 cAMP-dependent protein 100.0 3.7E-45 8E-50 390.1 18.3 257 379-697 42-308 (355)
24 KOG0592 3-phosphoinositide-dep 100.0 7.6E-45 1.7E-49 414.1 21.3 275 377-697 69-349 (604)
25 KOG0591 NIMA (never in mitosis 100.0 3.1E-46 6.8E-51 394.7 8.7 249 380-685 18-280 (375)
26 KOG0605 NDR and related serine 100.0 2.1E-44 4.7E-49 411.4 22.1 278 379-699 139-458 (550)
27 KOG0661 MAPK related serine/th 100.0 2.6E-44 5.7E-49 404.1 13.5 260 377-692 6-297 (538)
28 KOG0593 Predicted protein kina 100.0 8.7E-44 1.9E-48 379.6 15.9 257 380-691 1-289 (396)
29 KOG0694 Serine/threonine prote 100.0 6E-43 1.3E-47 409.3 23.3 288 377-725 364-661 (694)
30 KOG0600 Cdc2-related protein k 100.0 7E-43 1.5E-47 395.3 19.5 266 374-691 110-405 (560)
31 KOG0582 Ste20-like serine/thre 100.0 3.9E-42 8.6E-47 383.9 22.9 264 379-694 24-301 (516)
32 KOG0583 Serine/threonine prote 100.0 7.1E-42 1.5E-46 398.7 25.5 256 378-691 14-280 (370)
33 KOG0597 Serine-threonine prote 100.0 8.5E-43 1.8E-47 395.7 17.2 253 380-691 1-256 (808)
34 KOG0659 Cdk activating kinase 100.0 6E-42 1.3E-46 360.8 19.5 258 381-693 2-288 (318)
35 KOG0192 Tyrosine kinase specif 100.0 1.8E-41 3.9E-46 392.0 24.0 249 380-685 40-298 (362)
36 KOG0663 Protein kinase PITSLRE 100.0 8.7E-42 1.9E-46 368.8 18.1 268 374-694 69-369 (419)
37 KOG0588 Serine/threonine prote 100.0 1E-41 2.2E-46 395.1 19.8 258 378-694 9-271 (786)
38 TIGR00418 thrS threonyl-tRNA s 100.0 1.8E-40 4E-45 410.2 32.3 348 740-1183 188-561 (563)
39 KOG0198 MEKK and related serin 100.0 3.4E-41 7.4E-46 378.9 20.0 261 381-694 17-284 (313)
40 PRK12294 hisZ ATP phosphoribos 100.0 3.1E-40 6.7E-45 366.2 27.2 256 750-1049 5-268 (272)
41 KOG0033 Ca2+/calmodulin-depend 100.0 9.9E-43 2.2E-47 361.3 6.5 259 378-693 8-274 (355)
42 KOG0660 Mitogen-activated prot 100.0 3.7E-41 8E-46 370.5 18.5 273 382-714 23-326 (359)
43 KOG0610 Putative serine/threon 100.0 7E-41 1.5E-45 371.7 18.9 277 379-697 75-403 (459)
44 KOG0611 Predicted serine/threo 100.0 4.9E-41 1.1E-45 367.9 16.8 252 380-691 52-308 (668)
45 KOG0585 Ca2+/calmodulin-depend 100.0 9.1E-41 2E-45 374.7 19.0 268 376-692 92-378 (576)
46 KOG0578 p21-activated serine/t 100.0 1E-40 2.2E-45 384.4 17.7 253 381-692 273-529 (550)
47 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-39 2.4E-44 371.0 23.7 254 381-696 1-264 (291)
48 PTZ00263 protein kinase A cata 100.0 1.1E-39 2.4E-44 377.9 23.7 258 378-697 15-282 (329)
49 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.1E-39 8.8E-44 365.7 26.4 254 380-689 4-288 (288)
50 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.9E-39 8.4E-44 368.4 26.0 258 381-694 5-296 (303)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.6E-39 1E-43 372.7 26.6 265 382-693 1-297 (338)
52 KOG0599 Phosphorylase kinase g 100.0 1.7E-40 3.6E-45 349.0 12.0 259 379-693 15-290 (411)
53 cd07848 STKc_CDKL5 Catalytic d 100.0 5.9E-39 1.3E-43 363.2 25.0 254 381-689 1-287 (287)
54 PRK00413 thrS threonyl-tRNA sy 100.0 7.6E-40 1.6E-44 410.7 18.8 360 734-1188 252-635 (638)
55 cd05571 STKc_PKB Catalytic dom 100.0 3.6E-39 7.7E-44 372.6 22.6 252 387-697 1-262 (323)
56 KOG0589 Serine/threonine prote 100.0 1.1E-39 2.3E-44 375.1 17.5 253 380-689 3-261 (426)
57 PTZ00426 cAMP-dependent protei 100.0 7.8E-39 1.7E-43 372.6 24.6 258 377-696 26-294 (340)
58 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-39 7.3E-44 356.7 20.3 266 380-694 10-310 (323)
59 KOG0201 Serine/threonine prote 100.0 1.3E-40 2.8E-45 372.3 7.4 253 381-693 13-270 (467)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-38 4E-43 368.0 25.6 258 381-697 1-268 (333)
61 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-38 5.2E-43 371.7 26.8 275 381-698 1-305 (363)
62 cd05626 STKc_LATS2 Catalytic d 100.0 4.2E-38 9.1E-43 372.1 26.8 273 382-695 2-314 (381)
63 cd05573 STKc_ROCK_NDR_like Cat 100.0 2E-38 4.3E-43 369.6 23.7 275 381-698 1-297 (350)
64 cd05631 STKc_GRK4 Catalytic do 100.0 3.9E-38 8.4E-43 357.1 24.8 258 382-698 1-273 (285)
65 cd05599 STKc_NDR_like Catalyti 100.0 3.4E-38 7.3E-43 370.2 24.9 275 381-697 1-307 (364)
66 cd07862 STKc_CDK6 Catalytic do 100.0 6.7E-38 1.4E-42 355.1 26.3 257 381-689 1-290 (290)
67 KOG0197 Tyrosine kinases [Sign 100.0 8.1E-39 1.8E-43 368.6 19.0 243 381-684 206-455 (468)
68 KOG0580 Serine/threonine prote 100.0 2.8E-39 6.2E-44 336.5 13.7 253 379-692 20-279 (281)
69 KOG0612 Rho-associated, coiled 100.0 1.5E-39 3.2E-44 394.6 13.4 277 381-713 75-369 (1317)
70 cd05585 STKc_YPK1_like Catalyt 100.0 4.3E-38 9.3E-43 361.7 24.7 248 389-695 1-256 (312)
71 cd05629 STKc_NDR_like_fungal C 100.0 4.8E-38 1E-42 371.0 24.6 275 381-697 1-316 (377)
72 cd05593 STKc_PKB_gamma Catalyt 100.0 4.8E-38 1E-42 364.0 23.9 252 387-697 1-262 (328)
73 cd05595 STKc_PKB_beta Catalyti 100.0 4.3E-38 9.3E-43 363.6 23.2 252 387-697 1-262 (323)
74 KOG0032 Ca2+/calmodulin-depend 100.0 8.1E-38 1.8E-42 364.5 25.1 258 377-692 31-299 (382)
75 cd05625 STKc_LATS1 Catalytic d 100.0 8.2E-38 1.8E-42 369.6 24.9 272 382-695 2-314 (382)
76 PRK12305 thrS threonyl-tRNA sy 100.0 2.5E-37 5.5E-42 383.0 30.3 350 739-1187 193-571 (575)
77 cd07876 STKc_JNK2 Catalytic do 100.0 1.6E-37 3.4E-42 364.1 26.1 260 379-691 19-320 (359)
78 PHA03212 serine/threonine kina 100.0 1.1E-37 2.3E-42 369.5 24.7 251 379-692 90-382 (391)
79 cd05601 STKc_CRIK Catalytic do 100.0 8.8E-38 1.9E-42 361.7 23.4 264 381-699 1-276 (330)
80 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-37 2.7E-42 366.8 25.0 263 382-693 1-295 (372)
81 cd05598 STKc_LATS Catalytic do 100.0 6.4E-38 1.4E-42 369.7 22.6 275 381-697 1-312 (376)
82 PTZ00036 glycogen synthase kin 100.0 1E-37 2.2E-42 375.3 24.7 258 381-692 66-357 (440)
83 PRK12444 threonyl-tRNA synthet 100.0 2.6E-37 5.6E-42 386.1 28.8 352 738-1187 260-637 (639)
84 cd05627 STKc_NDR2 Catalytic do 100.0 1.3E-37 2.9E-42 365.0 24.2 275 381-698 1-305 (360)
85 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-37 3.8E-42 358.5 24.8 257 382-697 1-268 (324)
86 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-37 2.4E-42 359.8 22.8 252 387-697 1-264 (320)
87 cd06649 PKc_MEK2 Catalytic dom 100.0 3.6E-37 7.8E-42 357.1 26.9 254 380-693 4-308 (331)
88 cd07863 STKc_CDK4 Catalytic do 100.0 3.6E-37 7.9E-42 348.5 26.2 256 382-689 1-288 (288)
89 cd05616 STKc_cPKC_beta Catalyt 100.0 2.6E-37 5.6E-42 357.0 24.7 257 382-697 1-268 (323)
90 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.3E-37 7.2E-42 353.4 25.3 258 380-693 5-293 (309)
91 KOG0579 Ste20-like serine/thre 100.0 6.2E-39 1.3E-43 365.6 10.8 256 381-693 32-296 (1187)
92 cd07874 STKc_JNK3 Catalytic do 100.0 2.6E-37 5.6E-42 361.6 24.6 261 379-692 15-317 (355)
93 cd05591 STKc_nPKC_epsilon Cata 100.0 2E-37 4.2E-42 357.7 23.2 252 387-697 1-265 (321)
94 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-37 5E-42 364.4 24.2 263 380-697 42-315 (370)
95 cd05614 STKc_MSK2_N N-terminal 100.0 3.5E-37 7.7E-42 357.0 25.2 259 382-697 1-278 (332)
96 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-37 2.3E-42 360.4 20.8 252 387-697 1-263 (325)
97 cd07875 STKc_JNK1 Catalytic do 100.0 3.6E-37 7.8E-42 361.7 25.4 260 379-691 22-323 (364)
98 KOG0690 Serine/threonine prote 100.0 1.5E-38 3.3E-43 340.6 11.9 288 378-726 165-462 (516)
99 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-37 8.8E-42 355.5 24.4 254 383-696 1-267 (324)
100 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-37 4.6E-42 360.4 22.3 260 380-692 14-304 (343)
101 KOG0658 Glycogen synthase kina 100.0 4.2E-38 9.1E-43 347.0 15.0 255 382-693 25-313 (364)
102 cd05584 STKc_p70S6K Catalytic 100.0 3.8E-37 8.2E-42 355.7 23.6 250 387-695 2-265 (323)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 4.1E-37 8.8E-42 362.2 24.1 261 380-695 42-313 (370)
104 cd05620 STKc_nPKC_delta Cataly 100.0 3.9E-37 8.5E-42 354.5 23.4 252 387-697 1-259 (316)
105 cd05592 STKc_nPKC_theta_delta 100.0 4.3E-37 9.3E-42 354.2 23.5 253 387-698 1-260 (316)
106 KOG4717 Serine/threonine prote 100.0 1E-37 2.3E-42 349.8 17.6 258 377-693 14-277 (864)
107 cd05588 STKc_aPKC Catalytic do 100.0 5.2E-37 1.1E-41 355.5 24.1 252 387-697 1-273 (329)
108 cd05582 STKc_RSK_N N-terminal 100.0 1.8E-37 3.8E-42 357.4 19.7 251 387-696 2-264 (318)
109 KOG4721 Serine/threonine prote 100.0 1.8E-38 3.8E-43 359.8 10.5 238 381-687 124-365 (904)
110 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-36 2.3E-41 353.2 25.8 264 381-698 1-278 (331)
111 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.2E-37 1.3E-41 355.7 23.7 250 381-685 7-329 (338)
112 cd05570 STKc_PKC Catalytic dom 100.0 5.8E-37 1.3E-41 353.3 23.4 252 387-697 1-263 (318)
113 cd05615 STKc_cPKC_alpha Cataly 100.0 9.4E-37 2E-41 352.5 25.1 258 382-698 1-269 (323)
114 PTZ00284 protein kinase; Provi 100.0 7.4E-37 1.6E-41 371.1 25.2 252 380-692 128-444 (467)
115 KOG0195 Integrin-linked kinase 100.0 1.4E-38 2.9E-43 334.0 8.5 340 252-684 85-440 (448)
116 cd05618 STKc_aPKC_iota Catalyt 100.0 7.9E-37 1.7E-41 354.1 24.1 253 387-698 1-274 (329)
117 cd05575 STKc_SGK Catalytic dom 100.0 4.9E-37 1.1E-41 354.7 22.3 251 387-696 1-261 (323)
118 cd07839 STKc_CDK5 Catalytic do 100.0 6.8E-37 1.5E-41 345.5 22.9 253 382-689 1-284 (284)
119 cd07861 STKc_CDK1_euk Catalyti 100.0 1.6E-36 3.4E-41 342.5 25.8 253 382-689 1-285 (285)
120 cd05619 STKc_nPKC_theta Cataly 100.0 7.6E-37 1.6E-41 352.2 23.5 252 387-697 1-259 (316)
121 cd05622 STKc_ROCK1 Catalytic d 100.0 9.1E-37 2E-41 359.4 24.5 262 380-696 42-314 (371)
122 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.1E-36 4.5E-41 345.4 26.5 258 380-693 5-293 (301)
123 KOG0577 Serine/threonine prote 100.0 4.1E-38 9E-43 358.0 12.3 249 383-691 28-283 (948)
124 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-36 2.8E-41 343.8 23.8 249 389-696 1-267 (280)
125 cd05623 STKc_MRCK_alpha Cataly 100.0 1.5E-36 3.2E-41 352.1 24.9 264 381-698 1-278 (332)
126 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-36 4.3E-41 351.3 25.1 254 381-693 5-306 (333)
127 KOG0574 STE20-like serine/thre 100.0 3.8E-39 8.2E-44 341.9 2.0 250 381-693 33-290 (502)
128 PTZ00283 serine/threonine prot 100.0 2.6E-36 5.7E-41 367.8 27.2 266 380-693 31-304 (496)
129 PLN00034 mitogen-activated pro 100.0 1.9E-36 4.1E-41 354.2 24.6 253 379-692 72-334 (353)
130 cd05605 STKc_GRK4_like Catalyt 100.0 2.8E-36 6E-41 341.9 25.2 258 382-698 1-273 (285)
131 cd05624 STKc_MRCK_beta Catalyt 100.0 1.8E-36 3.9E-41 351.4 24.1 264 381-698 1-278 (331)
132 cd05586 STKc_Sck1_like Catalyt 100.0 6.4E-37 1.4E-41 354.7 20.3 252 389-697 1-264 (330)
133 cd07868 STKc_CDK8 Catalytic do 100.0 2.6E-36 5.7E-41 346.9 24.7 250 386-689 6-317 (317)
134 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.3E-36 5E-41 349.8 24.0 253 387-698 1-272 (327)
135 PHA03209 serine/threonine kina 100.0 2.2E-36 4.9E-41 354.3 23.9 247 381-692 66-357 (357)
136 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-36 2.4E-41 352.1 20.8 252 387-697 1-262 (325)
137 PTZ00266 NIMA-related protein 100.0 3.6E-36 7.8E-41 377.8 26.9 261 376-692 8-301 (1021)
138 PF00069 Pkinase: Protein kina 100.0 1.1E-36 2.4E-41 338.1 19.3 252 383-689 1-260 (260)
139 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-36 4E-41 350.1 21.8 251 387-696 1-261 (325)
140 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-36 4.6E-41 349.0 21.8 250 387-695 1-260 (321)
141 KOG0193 Serine/threonine prote 100.0 9.6E-37 2.1E-41 351.7 18.7 248 380-685 391-648 (678)
142 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-35 2.3E-40 331.3 26.7 255 381-689 2-263 (263)
143 KOG0696 Serine/threonine prote 100.0 4.1E-37 8.9E-42 337.8 14.3 264 377-699 345-619 (683)
144 cd08529 STKc_FA2-like Catalyti 100.0 1.7E-35 3.6E-40 328.2 27.3 250 382-689 1-256 (256)
145 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-35 4.7E-40 327.8 27.3 251 382-689 1-257 (257)
146 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-35 3.3E-40 334.3 26.2 254 381-689 1-286 (286)
147 cd07865 STKc_CDK9 Catalytic do 100.0 2.2E-35 4.8E-40 337.0 27.5 270 377-689 8-310 (310)
148 cd07845 STKc_CDK10 Catalytic d 100.0 1.5E-35 3.2E-40 339.6 26.0 262 378-692 4-296 (309)
149 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-35 2.7E-40 335.2 24.4 253 382-689 1-284 (284)
150 KOG0986 G protein-coupled rece 100.0 6.6E-37 1.4E-41 341.3 13.0 259 380-698 184-458 (591)
151 PTZ00267 NIMA-related protein 100.0 1.5E-35 3.2E-40 360.5 25.8 254 381-692 67-329 (478)
152 PHA02988 hypothetical protein; 100.0 2.1E-35 4.5E-40 334.8 25.2 243 387-686 26-275 (283)
153 cd05607 STKc_GRK7 Catalytic do 100.0 1.5E-35 3.3E-40 334.4 24.0 248 389-695 1-263 (277)
154 PHA03207 serine/threonine kina 100.0 2.1E-35 4.5E-40 350.5 25.9 257 380-697 91-386 (392)
155 KOG4279 Serine/threonine prote 100.0 9.7E-37 2.1E-41 351.2 13.4 248 388-692 582-838 (1226)
156 cd07867 STKc_CDC2L6 Catalytic 100.0 2.9E-35 6.3E-40 337.8 25.7 249 387-689 7-317 (317)
157 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-35 4.6E-40 341.5 24.6 265 385-697 2-318 (327)
158 cd05609 STKc_MAST Catalytic do 100.0 6.1E-35 1.3E-39 334.1 27.9 274 381-695 1-282 (305)
159 cd05580 STKc_PKA Catalytic dom 100.0 4.2E-35 9E-40 332.8 26.2 255 381-697 1-265 (290)
160 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-35 3.7E-40 331.0 22.7 250 381-688 9-267 (267)
161 PHA03211 serine/threonine kina 100.0 2E-35 4.3E-40 355.4 24.8 249 380-691 168-460 (461)
162 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.2E-35 1.1E-39 326.0 26.3 257 381-689 1-267 (267)
163 cd07843 STKc_CDC2L1 Catalytic 100.0 1.8E-35 4E-40 335.8 23.0 258 379-689 3-293 (293)
164 cd06631 STKc_YSK4 Catalytic do 100.0 5.3E-35 1.1E-39 326.7 26.3 257 382-689 1-265 (265)
165 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.2E-35 6.8E-40 331.5 24.6 256 381-695 1-270 (283)
166 cd06615 PKc_MEK Catalytic doma 100.0 4.2E-35 9.1E-40 336.2 26.0 252 381-692 1-293 (308)
167 cd07855 STKc_ERK5 Catalytic do 100.0 1.8E-35 3.8E-40 343.2 23.1 267 381-694 5-302 (334)
168 KOG0586 Serine/threonine prote 100.0 5.6E-36 1.2E-40 348.0 18.7 257 377-692 52-312 (596)
169 cd05096 PTKc_DDR1 Catalytic do 100.0 4.9E-35 1.1E-39 334.6 26.0 250 381-685 5-300 (304)
170 cd07837 STKc_CdkB_plant Cataly 100.0 4.2E-35 9.1E-40 332.8 25.3 260 381-690 1-295 (295)
171 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-35 6.5E-40 329.1 23.7 252 380-688 8-267 (267)
172 cd06637 STKc_TNIK Catalytic do 100.0 4.3E-35 9.3E-40 328.5 24.9 256 381-689 6-272 (272)
173 cd05574 STKc_phototropin_like 100.0 6.9E-35 1.5E-39 335.0 27.2 275 381-697 1-300 (316)
174 cd06613 STKc_MAP4K3_like Catal 100.0 6.4E-35 1.4E-39 324.6 25.9 251 381-688 3-262 (262)
175 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-35 6.2E-40 332.4 23.3 254 381-689 1-286 (286)
176 cd07832 STKc_CCRK Catalytic do 100.0 5.9E-35 1.3E-39 329.5 25.9 254 382-689 1-285 (286)
177 cd06652 STKc_MEKK2 Catalytic d 100.0 1.1E-34 2.4E-39 324.4 27.7 257 381-690 2-265 (265)
178 cd06651 STKc_MEKK3 Catalytic d 100.0 7.5E-35 1.6E-39 326.1 26.3 257 381-690 2-265 (266)
179 cd06643 STKc_SLK Catalytic dom 100.0 5.4E-35 1.2E-39 330.2 25.3 256 382-694 6-270 (282)
180 cd07850 STKc_JNK Catalytic dom 100.0 3.3E-35 7.1E-40 343.7 24.3 260 379-691 14-316 (353)
181 cd06611 STKc_SLK_like Catalyti 100.0 3.5E-35 7.6E-40 331.1 23.6 256 381-693 5-269 (280)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 5.9E-35 1.3E-39 329.7 25.5 252 381-695 1-262 (279)
183 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-34 2.6E-39 321.9 27.5 250 382-689 1-256 (256)
184 PLN00009 cyclin-dependent kina 100.0 5.4E-35 1.2E-39 332.2 25.3 258 380-692 1-290 (294)
185 cd05632 STKc_GRK5 Catalytic do 100.0 7.2E-35 1.6E-39 330.3 26.2 256 383-695 2-270 (285)
186 cd05630 STKc_GRK6 Catalytic do 100.0 4.5E-35 9.7E-40 332.2 24.3 255 382-695 1-270 (285)
187 cd06644 STKc_STK10_LOK Catalyt 100.0 6.1E-35 1.3E-39 331.6 25.4 258 381-695 12-278 (292)
188 cd07844 STKc_PCTAIRE_like Cata 100.0 7.4E-35 1.6E-39 330.3 25.9 254 380-689 4-291 (291)
189 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.8E-35 2.1E-39 324.6 26.4 255 383-689 2-267 (267)
190 cd07841 STKc_CDK7 Catalytic do 100.0 5.3E-35 1.2E-39 332.7 24.3 257 382-693 1-289 (298)
191 cd06612 STKc_MST1_2 Catalytic 100.0 5E-35 1.1E-39 324.4 23.4 249 381-689 3-256 (256)
192 cd06654 STKc_PAK1 Catalytic do 100.0 1E-34 2.3E-39 331.0 26.6 252 381-691 20-275 (296)
193 cd07835 STKc_CDK1_like Catalyt 100.0 5.8E-35 1.3E-39 329.6 24.0 252 383-689 1-283 (283)
194 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-34 2.8E-39 330.9 26.8 275 379-689 6-311 (311)
195 cd08218 STKc_Nek1 Catalytic do 100.0 1.3E-34 2.9E-39 321.5 26.0 250 382-689 1-256 (256)
196 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.4E-35 1.8E-39 326.1 24.6 247 381-685 5-260 (266)
197 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-34 2.8E-39 327.2 26.1 257 380-689 17-286 (286)
198 KOG0667 Dual-specificity tyros 100.0 2.4E-35 5.2E-40 346.4 20.6 250 382-693 187-509 (586)
199 cd05104 PTKc_Kit Catalytic dom 100.0 4.4E-35 9.6E-40 345.6 23.0 251 380-686 34-370 (375)
200 KOG1026 Nerve growth factor re 100.0 8E-36 1.7E-40 358.6 16.6 248 381-685 486-757 (774)
201 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-34 3E-39 330.0 26.1 253 381-692 19-275 (296)
202 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-34 4.1E-39 320.5 26.4 252 382-689 1-265 (265)
203 cd07849 STKc_ERK1_2_like Catal 100.0 1E-34 2.2E-39 337.1 25.3 265 380-693 4-299 (336)
204 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-34 2.8E-39 326.7 25.2 252 382-689 1-284 (284)
205 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.1E-34 4.6E-39 326.8 27.0 253 381-689 5-291 (291)
206 cd06609 STKc_MST3_like Catalyt 100.0 1.3E-34 2.8E-39 325.5 24.9 255 381-695 1-260 (274)
207 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-34 2.2E-39 327.6 23.8 250 380-686 4-279 (283)
208 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-34 3.8E-39 322.9 25.4 257 381-689 6-275 (275)
209 cd05106 PTKc_CSF-1R Catalytic 100.0 6E-35 1.3E-39 344.4 22.7 251 380-686 37-368 (374)
210 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-34 3.9E-39 324.9 25.2 251 383-689 1-282 (282)
211 cd06605 PKc_MAPKK Catalytic do 100.0 8.4E-35 1.8E-39 324.5 22.3 253 381-693 1-264 (265)
212 KOG0666 Cyclin C-dependent kin 100.0 7.4E-36 1.6E-40 319.4 12.9 264 379-693 22-344 (438)
213 cd08220 STKc_Nek8 Catalytic do 100.0 2.8E-34 6E-39 318.4 26.1 249 382-689 1-256 (256)
214 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.2E-34 2.6E-39 336.7 24.1 263 380-692 4-297 (337)
215 cd08228 STKc_Nek6 Catalytic do 100.0 2.4E-34 5.2E-39 321.5 25.4 250 380-686 1-261 (267)
216 KOG0596 Dual specificity; seri 100.0 2.4E-35 5.2E-40 336.0 17.2 256 380-692 360-633 (677)
217 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.9E-34 6.2E-39 324.0 25.7 256 381-689 16-282 (282)
218 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-34 2.7E-39 327.6 22.8 254 381-692 1-268 (286)
219 cd07833 STKc_CDKL Catalytic do 100.0 1.6E-34 3.6E-39 326.3 23.6 255 381-689 1-288 (288)
220 cd06639 STKc_myosinIIIB Cataly 100.0 5.5E-34 1.2E-38 323.4 28.0 258 380-690 21-291 (291)
221 cd05108 PTKc_EGFR Catalytic do 100.0 2.1E-34 4.6E-39 331.4 24.6 249 380-686 6-264 (316)
222 cd06626 STKc_MEKK4 Catalytic d 100.0 5.6E-34 1.2E-38 317.5 27.2 257 382-689 1-264 (264)
223 cd05578 STKc_Yank1 Catalytic d 100.0 1.3E-34 2.8E-39 322.3 21.8 249 382-689 1-258 (258)
224 cd06632 STKc_MEKK1_plant Catal 100.0 3.8E-34 8.1E-39 317.4 25.5 250 383-689 2-258 (258)
225 KOG0983 Mitogen-activated prot 100.0 1.8E-35 3.9E-40 311.6 13.8 257 380-693 91-356 (391)
226 cd06656 STKc_PAK3 Catalytic do 100.0 2.1E-34 4.6E-39 328.6 23.7 254 380-692 18-275 (297)
227 KOG4236 Serine/threonine prote 100.0 1E-35 2.3E-40 334.5 12.5 248 387-693 570-826 (888)
228 cd08219 STKc_Nek3 Catalytic do 100.0 5.1E-34 1.1E-38 316.9 25.8 247 382-687 1-253 (255)
229 cd06623 PKc_MAPKK_plant_like C 100.0 5.1E-34 1.1E-38 317.5 25.7 254 381-692 1-262 (264)
230 cd07840 STKc_CDK9_like Catalyt 100.0 3.9E-34 8.4E-39 322.5 25.0 255 383-689 1-287 (287)
231 cd07834 STKc_MAPK Catalytic do 100.0 1.5E-34 3.3E-39 334.2 22.0 265 382-693 1-296 (330)
232 cd06616 PKc_MKK4 Catalytic dom 100.0 2E-34 4.2E-39 326.4 22.3 256 381-693 4-274 (288)
233 KOG0604 MAP kinase-activated p 100.0 1.3E-35 2.8E-40 316.6 11.8 257 377-693 57-329 (400)
234 cd06630 STKc_MEKK1 Catalytic d 100.0 4.4E-34 9.5E-39 319.3 24.8 257 382-690 1-268 (268)
235 cd06624 STKc_ASK Catalytic dom 100.0 6.4E-34 1.4E-38 318.7 25.9 251 382-689 9-268 (268)
236 KOG0194 Protein tyrosine kinas 100.0 8.5E-35 1.8E-39 340.7 19.4 248 381-685 157-415 (474)
237 PRK14799 thrS threonyl-tRNA sy 100.0 3.8E-34 8.3E-39 345.0 25.7 358 739-1187 155-533 (545)
238 KOG0608 Warts/lats-like serine 100.0 3.8E-35 8.3E-40 335.9 15.9 293 381-716 629-962 (1034)
239 cd07864 STKc_CDK12 Catalytic d 100.0 5.1E-34 1.1E-38 325.0 25.2 268 378-689 4-302 (302)
240 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.7E-34 1E-38 333.0 25.2 261 380-693 16-307 (345)
241 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-34 7.7E-39 324.0 23.5 252 381-692 5-272 (284)
242 cd07879 STKc_p38delta_MAPK13 C 100.0 3.7E-34 8E-39 333.4 24.3 260 380-693 14-304 (342)
243 cd05116 PTKc_Syk Catalytic dom 100.0 4.5E-34 9.7E-39 318.2 23.7 243 388-686 2-251 (257)
244 cd07842 STKc_CDK8_like Catalyt 100.0 4.5E-34 9.8E-39 327.3 24.4 258 382-689 1-316 (316)
245 cd07852 STKc_MAPK15 Catalytic 100.0 2.6E-34 5.7E-39 333.7 22.7 266 378-692 4-301 (337)
246 KOG0584 Serine/threonine prote 100.0 2.9E-35 6.2E-40 342.1 14.5 256 375-692 37-302 (632)
247 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.4E-34 1.6E-38 316.0 25.2 245 381-686 4-254 (256)
248 PRK13184 pknD serine/threonine 100.0 5.2E-34 1.1E-38 357.3 26.6 265 380-685 1-284 (932)
249 cd05054 PTKc_VEGFR Catalytic d 100.0 2.6E-34 5.7E-39 334.2 22.3 251 381-686 7-329 (337)
250 KOG0662 Cyclin-dependent kinas 100.0 7.8E-35 1.7E-39 289.8 15.1 257 381-692 2-289 (292)
251 cd08225 STKc_Nek5 Catalytic do 100.0 7.6E-34 1.7E-38 315.1 24.9 250 382-689 1-257 (257)
252 cd06607 STKc_TAO Catalytic dom 100.0 7.9E-34 1.7E-38 325.2 25.6 253 381-693 15-274 (307)
253 cd06658 STKc_PAK5 Catalytic do 100.0 2.5E-34 5.4E-39 327.4 21.0 253 381-692 22-278 (292)
254 cd05633 STKc_GRK3 Catalytic do 100.0 7.3E-34 1.6E-38 321.2 24.5 248 388-695 1-264 (279)
255 cd05090 PTKc_Ror1 Catalytic do 100.0 8.6E-34 1.9E-38 320.5 25.1 250 380-686 4-279 (283)
256 cd05572 STKc_cGK_PKG Catalytic 100.0 6.1E-34 1.3E-38 317.6 23.5 248 389-694 1-260 (262)
257 cd07857 STKc_MPK1 Catalytic do 100.0 1E-33 2.2E-38 328.2 26.0 264 382-692 1-298 (332)
258 cd07851 STKc_p38 Catalytic dom 100.0 4.3E-34 9.2E-39 333.0 22.8 262 379-693 13-305 (343)
259 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.7E-34 2.1E-38 330.1 25.7 261 379-692 13-304 (343)
260 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.2E-33 4.8E-38 313.9 27.5 256 381-689 2-264 (264)
261 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-33 2.5E-38 317.0 25.1 253 384-686 2-267 (272)
262 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-33 2.6E-38 317.1 25.3 255 382-689 2-272 (272)
263 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-33 3.5E-38 314.2 26.1 248 381-685 2-260 (267)
264 cd08229 STKc_Nek7 Catalytic do 100.0 6.2E-34 1.3E-38 318.2 22.7 248 381-685 2-260 (267)
265 cd06917 STKc_NAK1_like Catalyt 100.0 7.3E-34 1.6E-38 319.6 23.4 253 382-693 2-262 (277)
266 KOG1989 ARK protein kinase fam 100.0 1.9E-34 4.1E-39 348.6 19.8 258 381-686 37-307 (738)
267 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-33 3E-38 315.4 25.3 246 381-686 6-258 (263)
268 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.4E-33 5.2E-38 317.9 27.1 257 381-694 1-274 (287)
269 PHA03210 serine/threonine kina 100.0 5E-34 1.1E-38 348.6 23.1 264 377-695 144-463 (501)
270 cd06606 STKc_MAPKKK Catalytic 100.0 2.7E-33 5.8E-38 309.3 26.7 256 382-689 1-260 (260)
271 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-33 3.1E-38 312.7 24.6 242 387-685 1-248 (252)
272 cd05062 PTKc_IGF-1R Catalytic 100.0 1.6E-33 3.4E-38 317.3 25.3 249 381-686 6-274 (277)
273 cd05049 PTKc_Trk Catalytic dom 100.0 7.6E-34 1.7E-38 319.7 22.7 250 380-686 4-277 (280)
274 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-33 3.6E-38 317.5 25.3 249 380-686 6-264 (279)
275 PTZ00024 cyclin-dependent prot 100.0 1.3E-33 2.9E-38 327.3 25.2 272 381-693 8-320 (335)
276 cd06640 STKc_MST4 Catalytic do 100.0 1E-33 2.3E-38 319.0 23.5 253 381-693 4-260 (277)
277 cd08215 STKc_Nek Catalytic dom 100.0 2.5E-33 5.5E-38 309.8 26.2 250 382-689 1-258 (258)
278 cd06659 STKc_PAK6 Catalytic do 100.0 6.3E-34 1.4E-38 324.8 21.8 252 382-692 22-277 (297)
279 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.7E-33 3.6E-38 326.1 25.6 255 380-692 9-294 (328)
280 cd05606 STKc_beta_ARK Catalyti 100.0 1.5E-33 3.3E-38 318.4 24.6 250 388-697 1-266 (278)
281 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-33 3E-38 328.6 24.9 272 380-692 4-306 (342)
282 PF07714 Pkinase_Tyr: Protein 100.0 5.9E-34 1.3E-38 318.4 20.8 245 384-685 2-257 (259)
283 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-33 2.4E-38 335.9 24.3 251 380-686 36-393 (400)
284 cd08226 PK_STRAD_beta Pseudoki 100.0 6.8E-34 1.5E-38 329.1 21.9 261 387-695 4-317 (328)
285 cd06648 STKc_PAK_II Catalytic 100.0 2.4E-33 5.2E-38 317.9 25.9 253 382-693 20-276 (285)
286 cd05051 PTKc_DDR Catalytic dom 100.0 1.6E-33 3.4E-38 320.0 24.4 252 380-686 4-293 (296)
287 cd05035 PTKc_Axl_like Catalyti 100.0 2.5E-33 5.3E-38 313.9 25.3 254 383-686 1-268 (273)
288 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-33 4.5E-38 313.0 24.5 245 381-686 4-254 (256)
289 cd05061 PTKc_InsR Catalytic do 100.0 2.9E-33 6.3E-38 317.4 26.0 256 380-692 5-286 (288)
290 KOG0607 MAP kinase-interacting 100.0 1.4E-34 3E-39 310.4 14.2 271 375-695 71-370 (463)
291 KOG4645 MAPKKK (MAP kinase kin 100.0 1E-35 2.2E-40 365.5 6.2 253 386-690 1240-1498(1509)
292 cd07838 STKc_CDK4_6_like Catal 100.0 2.1E-33 4.6E-38 316.7 24.7 255 383-689 1-287 (287)
293 cd05032 PTKc_InsR_like Catalyt 100.0 3E-33 6.4E-38 314.4 25.7 250 380-686 5-274 (277)
294 KOG1095 Protein tyrosine kinas 100.0 6.7E-34 1.4E-38 353.4 22.4 248 381-685 692-956 (1025)
295 cd05033 PTKc_EphR Catalytic do 100.0 3.3E-33 7.2E-38 312.6 26.0 249 381-686 4-261 (266)
296 KOG0614 cGMP-dependent protein 100.0 1.5E-35 3.2E-40 333.3 6.7 263 379-699 418-690 (732)
297 cd06627 STKc_Cdc7_like Catalyt 100.0 4.4E-33 9.5E-38 307.8 26.4 250 382-689 1-254 (254)
298 cd05072 PTKc_Lyn Catalytic dom 100.0 2.6E-33 5.6E-38 312.3 24.7 245 380-685 5-256 (261)
299 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.4E-34 1.2E-38 321.1 19.4 252 381-692 4-259 (277)
300 cd05111 PTK_HER3 Pseudokinase 100.0 2.6E-33 5.6E-38 316.5 25.0 248 381-686 7-264 (279)
301 cd05611 STKc_Rim15_like Cataly 100.0 1.5E-33 3.3E-38 314.0 22.5 248 387-694 2-259 (260)
302 cd05088 PTKc_Tie2 Catalytic do 100.0 2.4E-33 5.3E-38 320.8 24.6 247 380-686 6-276 (303)
303 cd05581 STKc_PDK1 Catalytic do 100.0 2.5E-33 5.4E-38 314.7 24.1 265 381-689 1-280 (280)
304 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-33 4.8E-38 319.5 23.8 251 381-686 5-292 (295)
305 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-33 6.3E-38 311.5 24.1 245 381-686 4-254 (256)
306 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-33 2.9E-38 318.8 21.6 250 380-686 4-279 (283)
307 PHA03390 pk1 serine/threonine- 100.0 1.7E-33 3.7E-38 316.1 22.4 246 379-691 12-267 (267)
308 cd05093 PTKc_TrkB Catalytic do 100.0 3.4E-33 7.3E-38 316.8 24.9 247 381-685 5-274 (288)
309 cd08530 STKc_CNK2-like Catalyt 100.0 4.2E-33 9.1E-38 308.7 25.0 247 382-688 1-255 (256)
310 cd06647 STKc_PAK_I Catalytic d 100.0 1.7E-33 3.7E-38 320.5 22.5 255 380-693 18-276 (293)
311 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.5E-33 3.3E-38 328.4 22.6 251 381-686 7-335 (343)
312 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-33 8.1E-38 315.3 25.1 252 381-685 3-276 (283)
313 cd06635 STKc_TAO1 Catalytic do 100.0 4.8E-33 1E-37 320.4 26.4 252 381-692 25-283 (317)
314 cd06614 STKc_PAK Catalytic dom 100.0 3.3E-33 7.1E-38 316.3 24.5 254 380-692 18-276 (286)
315 cd05577 STKc_GRK Catalytic dom 100.0 2.6E-33 5.7E-38 315.8 23.6 248 389-695 1-263 (277)
316 cd06641 STKc_MST3 Catalytic do 100.0 3.6E-33 7.8E-38 314.6 24.6 251 382-692 5-259 (277)
317 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.7E-33 8.1E-38 314.5 24.6 249 381-686 6-274 (277)
318 cd05053 PTKc_FGFR Catalytic do 100.0 3.3E-33 7.2E-38 317.1 24.3 250 380-686 11-287 (293)
319 cd05122 PKc_STE Catalytic doma 100.0 7.4E-33 1.6E-37 304.5 26.3 248 382-688 1-253 (253)
320 cd00192 PTKc Catalytic domain 100.0 5E-33 1.1E-37 308.2 25.1 243 387-686 1-260 (262)
321 KOG1187 Serine/threonine prote 100.0 1.7E-33 3.7E-38 327.6 22.1 248 380-686 74-348 (361)
322 cd05060 PTKc_Syk_like Catalyti 100.0 5.4E-33 1.2E-37 309.3 25.2 243 387-686 1-251 (257)
323 cd07829 STKc_CDK_like Catalyti 100.0 2.7E-33 5.8E-38 315.1 22.9 252 383-689 1-282 (282)
324 cd05579 STKc_MAST_like Catalyt 100.0 2.5E-33 5.5E-38 311.4 22.4 256 389-693 1-264 (265)
325 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-33 5.4E-38 315.5 22.6 252 383-689 1-283 (283)
326 cd05089 PTKc_Tie1 Catalytic do 100.0 4.3E-33 9.3E-38 317.6 24.7 246 381-686 2-271 (297)
327 cd05115 PTKc_Zap-70 Catalytic 100.0 5.8E-33 1.3E-37 309.8 25.2 242 388-686 2-251 (257)
328 KOG0669 Cyclin T-dependent kin 100.0 2.7E-35 5.9E-40 306.9 5.5 271 379-692 15-321 (376)
329 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.3E-33 9.2E-38 315.2 23.8 252 382-686 5-279 (284)
330 cd06618 PKc_MKK7 Catalytic dom 100.0 7.5E-33 1.6E-37 315.3 26.0 257 380-693 14-280 (296)
331 KOG0695 Serine/threonine prote 100.0 6.5E-34 1.4E-38 305.5 15.1 261 380-699 249-529 (593)
332 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-32 3E-37 316.2 27.2 252 381-693 21-280 (313)
333 cd05610 STKc_MASTL Catalytic d 100.0 8.2E-33 1.8E-37 348.3 27.6 149 380-568 3-153 (669)
334 cd06634 STKc_TAO2 Catalytic do 100.0 7.5E-33 1.6E-37 317.5 24.8 251 381-692 15-273 (308)
335 cd05068 PTKc_Frk_like Catalyti 100.0 9.9E-33 2.1E-37 307.9 25.0 244 381-685 6-256 (261)
336 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.6E-33 7.9E-38 310.9 21.5 245 381-686 6-257 (261)
337 cd07830 STKc_MAK_like Catalyti 100.0 7.2E-33 1.6E-37 312.3 23.9 250 383-689 1-283 (283)
338 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-32 2.2E-37 311.6 25.2 252 381-686 4-279 (284)
339 cd05055 PTKc_PDGFR Catalytic d 100.0 8E-33 1.7E-37 316.5 24.4 251 380-686 34-297 (302)
340 cd05050 PTKc_Musk Catalytic do 100.0 8.5E-33 1.8E-37 313.2 24.1 249 380-685 4-284 (288)
341 cd05066 PTKc_EphR_A Catalytic 100.0 9.7E-33 2.1E-37 309.2 24.3 249 381-685 4-261 (267)
342 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-32 2.5E-37 308.8 24.6 253 380-686 3-264 (269)
343 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-32 2.7E-37 306.1 24.4 241 380-686 5-252 (256)
344 cd05071 PTKc_Src Catalytic dom 100.0 1.4E-32 3E-37 307.5 24.8 243 381-685 6-255 (262)
345 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-32 2.7E-37 312.7 24.7 248 381-686 5-278 (291)
346 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.8E-32 3.8E-37 306.9 25.4 250 381-686 5-263 (268)
347 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.4E-32 3.1E-37 306.5 24.3 244 380-685 5-255 (260)
348 cd08216 PK_STRAD Pseudokinase 100.0 6.8E-33 1.5E-37 318.0 22.2 258 388-693 5-302 (314)
349 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-32 3E-37 314.9 24.6 249 381-686 18-295 (307)
350 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.4E-33 1.8E-37 328.3 23.4 250 381-686 37-395 (401)
351 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-32 3.8E-37 304.7 24.5 244 387-686 1-254 (257)
352 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.3E-32 2.9E-37 314.5 24.1 250 380-686 14-292 (304)
353 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-32 3.2E-37 312.8 24.4 250 381-685 5-292 (296)
354 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-32 3.2E-37 310.3 24.2 247 381-685 5-276 (280)
355 KOG2345 Serine/threonine prote 100.0 6.9E-34 1.5E-38 297.3 12.0 263 380-686 20-296 (302)
356 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-32 5.1E-37 303.7 25.2 241 380-686 5-252 (256)
357 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.3E-32 5E-37 304.8 25.0 244 380-685 5-255 (260)
358 KOG0603 Ribosomal protein S6 k 100.0 3.2E-33 6.9E-38 326.7 18.6 337 278-689 203-566 (612)
359 cd06657 STKc_PAK4 Catalytic do 100.0 1E-32 2.2E-37 314.2 22.5 251 384-693 23-277 (292)
360 cd05613 STKc_MSK1_N N-terminal 100.0 2E-32 4.3E-37 310.5 24.6 260 382-697 1-279 (290)
361 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-32 5.1E-37 307.0 25.0 249 381-686 5-272 (275)
362 cd05045 PTKc_RET Catalytic dom 100.0 2.2E-32 4.7E-37 310.4 24.6 248 382-686 1-282 (290)
363 cd05043 PTK_Ryk Pseudokinase d 100.0 2.4E-32 5.3E-37 308.0 24.6 250 381-686 6-272 (280)
364 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-32 6.3E-37 305.7 24.9 244 387-685 1-265 (269)
365 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.4E-33 9.6E-38 310.6 18.1 235 387-686 1-256 (258)
366 cd05058 PTKc_Met_Ron Catalytic 100.0 2.7E-32 5.8E-37 304.1 24.1 246 387-686 1-255 (262)
367 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-32 3.2E-37 309.7 22.1 234 388-686 2-272 (274)
368 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-32 2.8E-37 308.0 21.5 235 387-686 1-260 (262)
369 cd05112 PTKc_Itk Catalytic dom 100.0 4.6E-32 1E-36 301.1 25.5 245 381-686 4-254 (256)
370 cd05069 PTKc_Yes Catalytic dom 100.0 3.7E-32 8.1E-37 303.3 24.7 243 381-685 6-255 (260)
371 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.1E-32 9E-37 312.1 25.7 249 381-686 12-289 (314)
372 cd05056 PTKc_FAK Catalytic dom 100.0 4.2E-32 9E-37 304.4 24.8 247 381-686 6-261 (270)
373 PHA02882 putative serine/threo 100.0 4.2E-32 9E-37 309.4 25.0 257 381-685 12-291 (294)
374 cd05042 PTKc_Aatyk Catalytic d 100.0 3.6E-32 7.8E-37 304.7 23.9 244 388-686 2-266 (269)
375 cd05034 PTKc_Src_like Catalyti 100.0 6.8E-32 1.5E-36 300.7 25.6 245 380-685 5-256 (261)
376 cd05110 PTKc_HER4 Catalytic do 100.0 3.3E-32 7.2E-37 311.3 23.7 249 380-686 6-264 (303)
377 smart00219 TyrKc Tyrosine kina 100.0 5.5E-32 1.2E-36 299.8 24.6 245 383-685 1-256 (258)
378 cd05085 PTKc_Fer Catalytic dom 100.0 6.2E-32 1.3E-36 299.0 25.0 241 387-686 1-247 (250)
379 cd05047 PTKc_Tie Catalytic dom 100.0 4.7E-32 1E-36 304.4 24.0 239 388-686 2-264 (270)
380 KOG0199 ACK and related non-re 100.0 2.8E-33 6E-38 324.3 14.2 251 379-686 108-368 (1039)
381 KOG4257 Focal adhesion tyrosin 100.0 8.9E-33 1.9E-37 316.5 17.8 243 384-685 392-644 (974)
382 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.2E-32 1.3E-36 313.5 25.0 249 381-686 12-289 (334)
383 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-32 6.8E-37 302.5 21.6 233 387-686 1-257 (259)
384 cd05057 PTKc_EGFR_like Catalyt 100.0 9.2E-32 2E-36 303.3 25.4 247 381-685 7-263 (279)
385 KOG4278 Protein tyrosine kinas 100.0 9.2E-33 2E-37 315.0 17.2 245 382-686 268-519 (1157)
386 cd05583 STKc_MSK_N N-terminal 100.0 7.3E-32 1.6E-36 305.6 24.4 259 382-697 1-277 (288)
387 cd08222 STKc_Nek11 Catalytic d 100.0 5E-32 1.1E-36 301.8 22.5 249 382-689 1-260 (260)
388 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.2E-32 1.3E-36 304.3 23.2 253 381-686 4-279 (284)
389 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-31 2.3E-36 301.3 24.8 244 388-686 2-265 (268)
390 cd05041 PTKc_Fes_like Catalyti 100.0 1E-31 2.3E-36 297.4 24.3 242 387-686 1-248 (251)
391 cd05123 STKc_AGC Catalytic dom 100.0 6E-32 1.3E-36 298.6 22.3 242 389-689 1-250 (250)
392 KOG1094 Discoidin domain recep 100.0 1.4E-32 2.9E-37 314.0 16.6 249 382-686 539-800 (807)
393 cd05073 PTKc_Hck Catalytic dom 100.0 2.6E-31 5.6E-36 296.5 26.1 244 380-685 5-255 (260)
394 KOG1006 Mitogen-activated prot 100.0 1.4E-33 3.1E-38 296.7 7.3 253 381-691 64-332 (361)
395 cd05083 PTKc_Chk Catalytic dom 100.0 1E-31 2.2E-36 298.5 22.6 239 380-686 5-250 (254)
396 KOG0196 Tyrosine kinase, EPH ( 100.0 2.2E-32 4.7E-37 321.5 17.8 251 380-686 628-887 (996)
397 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-31 4E-36 299.2 24.3 254 383-686 1-268 (273)
398 KOG2052 Activin A type IB rece 100.0 2.8E-32 6.1E-37 305.1 17.3 264 367-685 197-498 (513)
399 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-31 2.7E-36 299.9 22.3 242 388-686 2-266 (269)
400 cd08528 STKc_Nek10 Catalytic d 100.0 2.7E-31 5.8E-36 297.5 24.3 247 382-686 1-266 (269)
401 KOG0587 Traf2- and Nck-interac 100.0 1.4E-31 3E-36 319.7 19.7 260 381-693 19-289 (953)
402 cd05576 STKc_RPK118_like Catal 100.0 2E-31 4.4E-36 293.9 19.3 228 392-689 4-237 (237)
403 PLN02908 threonyl-tRNA synthet 100.0 3.4E-31 7.3E-36 331.5 23.5 354 738-1187 307-684 (686)
404 PLN03225 Serine/threonine-prot 100.0 3.6E-31 7.8E-36 325.9 20.3 261 379-693 130-457 (566)
405 PRK09194 prolyl-tRNA synthetas 100.0 4.5E-30 9.7E-35 315.9 27.6 434 738-1182 33-561 (565)
406 KOG1027 Serine/threonine prote 100.0 2E-31 4.3E-36 317.1 12.2 247 386-694 514-775 (903)
407 KOG0671 LAMMER dual specificit 100.0 1.6E-31 3.6E-36 294.9 10.1 251 378-692 86-412 (415)
408 KOG3653 Transforming growth fa 100.0 1.5E-30 3.2E-35 293.3 17.5 249 380-685 209-498 (534)
409 KOG0576 Mitogen-activated prot 100.0 1.5E-31 3.3E-36 310.2 9.0 270 381-708 15-294 (829)
410 KOG4250 TANK binding protein k 100.0 5.2E-31 1.1E-35 310.0 12.4 246 382-679 14-297 (732)
411 KOG1151 Tousled-like protein k 100.0 3.3E-31 7.2E-36 293.2 9.8 263 381-691 463-746 (775)
412 KOG0664 Nemo-like MAPK-related 100.0 9E-32 2E-36 282.9 4.1 262 382-692 54-349 (449)
413 smart00220 S_TKc Serine/Threon 100.0 2.4E-29 5.2E-34 274.3 22.8 238 393-689 1-244 (244)
414 KOG0665 Jun-N-terminal kinase 100.0 1.1E-30 2.3E-35 282.4 10.9 256 381-690 17-314 (369)
415 PLN03224 probable serine/threo 100.0 9.4E-29 2E-33 297.7 24.1 265 379-691 143-505 (507)
416 KOG0668 Casein kinase II, alph 100.0 5.1E-30 1.1E-34 264.5 10.6 253 379-693 36-329 (338)
417 KOG0200 Fibroblast/platelet-de 100.0 9.2E-29 2E-33 307.4 22.1 248 382-686 297-575 (609)
418 KOG1025 Epidermal growth facto 100.0 4E-29 8.7E-34 294.4 14.3 247 382-686 697-953 (1177)
419 PLN00113 leucine-rich repeat r 100.0 2E-28 4.3E-33 323.0 19.3 236 381-686 690-947 (968)
420 KOG0984 Mitogen-activated prot 100.0 1E-28 2.2E-33 252.0 11.8 200 381-637 46-257 (282)
421 KOG0670 U4/U6-associated splic 100.0 6.5E-29 1.4E-33 280.6 11.3 251 380-691 431-751 (752)
422 PRK12325 prolyl-tRNA synthetas 100.0 7.9E-27 1.7E-31 278.7 26.9 371 739-1182 34-438 (439)
423 KOG1152 Signal transduction se 100.0 1.1E-28 2.5E-33 282.1 10.4 197 380-633 560-770 (772)
424 TIGR00409 proS_fam_II prolyl-t 100.0 4.3E-27 9.3E-32 287.0 24.6 439 731-1183 28-567 (568)
425 KOG1290 Serine/threonine prote 99.9 1.1E-26 2.4E-31 262.4 21.7 136 381-555 78-224 (590)
426 cd00180 PKc Catalytic domain o 99.9 1.3E-25 2.8E-30 238.1 22.9 212 389-687 1-215 (215)
427 PRK04173 glycyl-tRNA synthetas 99.9 5.7E-26 1.2E-30 271.1 19.8 323 741-1184 27-455 (456)
428 KOG1167 Serine/threonine prote 99.9 1.4E-26 3.1E-31 259.4 12.3 267 380-693 35-388 (418)
429 PLN00181 protein SPA1-RELATED; 99.9 1.3E-26 2.8E-31 298.6 12.3 198 493-692 53-271 (793)
430 KOG1024 Receptor-like protein 99.9 4.4E-26 9.5E-31 250.7 14.0 249 381-685 284-550 (563)
431 KOG1345 Serine/threonine kinas 99.9 1.4E-25 3.1E-30 237.1 11.1 245 372-677 15-275 (378)
432 TIGR00408 proS_fam_I prolyl-tR 99.9 2.4E-24 5.3E-29 258.8 21.5 323 739-1188 25-384 (472)
433 PLN02837 threonine-tRNA ligase 99.9 8.6E-24 1.9E-28 261.6 26.7 353 740-1188 235-611 (614)
434 smart00221 STYKc Protein kinas 99.9 7.7E-24 1.7E-28 229.1 21.8 209 383-646 1-215 (225)
435 PRK08661 prolyl-tRNA synthetas 99.9 3.5E-23 7.5E-28 249.4 26.0 324 741-1188 33-390 (477)
436 KOG1033 eIF-2alpha kinase PEK/ 99.9 1.1E-24 2.4E-29 251.1 6.7 298 376-688 44-514 (516)
437 PRK03991 threonyl-tRNA synthet 99.9 6.5E-22 1.4E-26 242.7 30.9 347 741-1187 216-594 (613)
438 smart00750 KIND kinase non-cat 99.9 3.5E-23 7.6E-28 217.1 12.7 157 504-689 1-168 (176)
439 COG0441 ThrS Threonyl-tRNA syn 99.9 1.1E-21 2.3E-26 235.7 21.3 356 739-1190 207-585 (589)
440 PRK09188 serine/threonine prot 99.9 3.8E-22 8.2E-27 231.4 15.9 175 377-608 14-194 (365)
441 COG0515 SPS1 Serine/threonine 99.9 4.3E-20 9.3E-25 207.6 24.8 253 383-687 2-276 (384)
442 KOG0590 Checkpoint kinase and 99.9 2.1E-22 4.6E-27 247.8 5.9 260 385-695 322-594 (601)
443 KOG1165 Casein kinase (serine/ 99.9 6.1E-21 1.3E-25 207.3 15.2 202 381-635 28-239 (449)
444 KOG0603 Ribosomal protein S6 k 99.8 3.9E-22 8.5E-27 234.1 3.8 243 388-699 1-256 (612)
445 KOG1163 Casein kinase (serine/ 99.8 3.8E-20 8.3E-25 193.3 17.8 256 375-683 9-277 (341)
446 KOG1164 Casein kinase (serine/ 99.8 1.2E-19 2.6E-24 209.9 22.9 255 382-686 19-293 (322)
447 KOG4018 Uncharacterized conser 99.8 2.5E-21 5.4E-26 199.0 3.6 119 13-133 27-149 (215)
448 KOG4158 BRPK/PTEN-induced prot 99.8 2.5E-20 5.5E-25 206.0 11.4 286 376-685 152-512 (598)
449 KOG1240 Protein kinase contain 99.8 8.4E-21 1.8E-25 231.3 7.9 272 382-707 24-315 (1431)
450 cd00670 Gly_His_Pro_Ser_Thr_tR 99.8 5.9E-20 1.3E-24 202.8 13.1 137 752-890 2-158 (235)
451 KOG0606 Microtubule-associated 99.8 2.9E-20 6.2E-25 227.2 10.0 237 380-695 82-324 (1205)
452 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-19 2.4E-24 194.0 11.0 140 386-569 2-167 (190)
453 cd05145 RIO1_like RIO kinase f 99.8 8.5E-19 1.8E-23 187.3 13.6 141 386-570 2-168 (190)
454 cd00771 ThrRS_core Threonyl-tR 99.8 1.2E-18 2.6E-23 198.6 14.9 149 740-890 18-183 (298)
455 PRK10359 lipopolysaccharide co 99.8 1.1E-18 2.5E-23 189.2 12.3 179 380-629 30-216 (232)
456 cd00779 ProRS_core_prok Prolyl 99.8 4.1E-19 8.9E-24 197.9 7.4 159 730-892 11-186 (255)
457 KOG1637 Threonyl-tRNA syntheta 99.8 2.4E-17 5.3E-22 185.2 18.9 356 736-1185 176-555 (560)
458 PF14531 Kinase-like: Kinase-l 99.7 4.2E-18 9.2E-23 190.0 11.9 247 382-677 13-288 (288)
459 TIGR00389 glyS_dimeric glycyl- 99.7 1.5E-17 3.3E-22 199.2 17.0 121 1062-1184 414-550 (551)
460 PRK10345 hypothetical protein; 99.7 6.1E-17 1.3E-21 175.0 14.9 137 385-566 6-156 (210)
461 PRK12274 serine/threonine prot 99.7 2.4E-16 5.3E-21 167.7 14.5 191 384-630 5-202 (218)
462 KOG1023 Natriuretic peptide re 99.7 1E-16 2.2E-21 189.4 11.8 236 434-728 1-260 (484)
463 smart00090 RIO RIO-like kinase 99.7 1.1E-16 2.4E-21 176.7 11.3 143 382-569 29-198 (237)
464 cd00772 ProRS_core Prolyl-tRNA 99.6 1.1E-15 2.4E-20 171.0 13.7 148 740-889 20-190 (264)
465 COG0423 GRS1 Glycyl-tRNA synth 99.6 2.6E-15 5.6E-20 173.4 16.8 127 1060-1188 413-554 (558)
466 PLN02734 glycyl-tRNA synthetas 99.6 2.3E-15 5E-20 182.8 16.9 122 1060-1186 526-662 (684)
467 cd00774 GlyRS-like_core Glycyl 99.6 1.2E-15 2.5E-20 170.2 10.9 140 740-887 20-177 (254)
468 PRK14879 serine/threonine prot 99.6 3.4E-15 7.3E-20 161.7 13.9 135 387-568 2-143 (211)
469 PRK14894 glycyl-tRNA synthetas 99.6 2.7E-14 6E-19 166.1 21.9 96 1088-1185 432-537 (539)
470 cd05144 RIO2_C RIO kinase fami 99.6 2.6E-15 5.5E-20 161.5 11.6 136 383-569 17-175 (198)
471 KOG1166 Mitotic checkpoint ser 99.6 2.8E-15 6E-20 188.3 12.8 237 380-684 697-947 (974)
472 TIGR03724 arch_bud32 Kae1-asso 99.6 1.1E-14 2.3E-19 156.4 12.3 131 388-568 1-138 (199)
473 KOG0590 Checkpoint kinase and 99.6 4.8E-16 1E-20 191.8 0.7 260 380-691 19-291 (601)
474 PRK09605 bifunctional UGMP fam 99.6 2.1E-14 4.5E-19 177.5 14.3 137 381-568 333-476 (535)
475 cd05119 RIO RIO kinase family, 99.5 2E-14 4.2E-19 152.7 11.5 160 386-569 2-164 (187)
476 TIGR02367 PylS pyrrolysyl-tRNA 99.5 2.3E-13 5E-18 157.0 13.8 123 754-884 241-375 (453)
477 PRK01723 3-deoxy-D-manno-octul 99.5 6.6E-13 1.4E-17 147.0 15.3 139 387-568 37-191 (239)
478 KOG0601 Cyclin-dependent kinas 99.5 4.1E-14 8.9E-19 167.4 5.1 258 382-692 115-385 (524)
479 PF00587 tRNA-synt_2b: tRNA sy 99.4 2.7E-13 5.9E-18 142.7 10.7 136 754-890 1-154 (173)
480 KOG0606 Microtubule-associated 99.4 2.4E-13 5.3E-18 167.3 7.3 281 379-700 802-1106(1205)
481 PRK04172 pheS phenylalanyl-tRN 99.4 1.1E-12 2.3E-17 159.5 12.6 147 734-884 215-408 (489)
482 cd05120 APH_ChoK_like Aminogly 99.4 1.6E-12 3.4E-17 131.1 11.4 131 385-568 2-138 (155)
483 cd00778 ProRS_core_arch_euk Pr 99.4 6.9E-13 1.5E-17 148.6 7.0 144 740-885 20-186 (261)
484 PF03129 HGTP_anticodon: Antic 99.3 5.8E-12 1.3E-16 118.7 9.7 90 1092-1183 1-93 (94)
485 KOG0601 Cyclin-dependent kinas 99.3 2.4E-12 5.1E-17 152.7 5.6 249 376-687 260-515 (524)
486 COG0442 ProS Prolyl-tRNA synth 99.3 9.8E-12 2.1E-16 147.8 10.6 398 731-1181 28-498 (500)
487 cd00861 ProRS_anticodon_short 99.3 2.6E-11 5.7E-16 114.1 10.2 91 1090-1181 1-93 (94)
488 PRK09537 pylS pyrolysyl-tRNA s 99.2 3.9E-11 8.5E-16 139.5 12.2 123 755-885 206-340 (417)
489 cd00860 ThrRS_anticodon ThrRS 99.2 7E-11 1.5E-15 110.4 11.5 90 1090-1181 1-90 (91)
490 cd00858 GlyRS_anticodon GlyRS 99.2 8.7E-11 1.9E-15 116.2 12.3 96 1088-1185 24-120 (121)
491 KOG2324 Prolyl-tRNA synthetase 99.2 1.1E-10 2.3E-15 128.5 13.3 121 732-854 34-169 (457)
492 PTZ00326 phenylalanyl-tRNA syn 99.2 1.8E-10 3.9E-15 136.4 14.6 155 747-903 223-460 (494)
493 TIGR01982 UbiB 2-polyprenylphe 99.2 1.2E-10 2.6E-15 140.0 11.9 72 495-569 233-307 (437)
494 smart00591 RWD domain in RING 99.2 1.3E-10 2.7E-15 112.2 9.6 83 17-101 23-106 (107)
495 cd00768 class_II_aaRS-like_cor 99.1 3.2E-10 7E-15 122.6 13.2 130 755-885 2-141 (211)
496 PRK04750 ubiB putative ubiquin 99.1 4.2E-11 9.2E-16 145.5 6.1 154 380-570 119-315 (537)
497 cd00862 ProRS_anticodon_zinc P 99.1 5.3E-10 1.2E-14 120.4 13.1 102 1087-1189 7-114 (202)
498 cd00738 HGTP_anticodon HGTP an 99.1 5.1E-10 1.1E-14 105.1 11.3 90 1090-1181 1-93 (94)
499 cd05146 RIO3_euk RIO kinase fa 99.1 8.3E-10 1.8E-14 117.8 12.8 138 387-569 3-174 (197)
500 cd05151 ChoK Choline Kinase (C 99.1 2.8E-10 6E-15 118.6 9.0 126 386-567 3-135 (170)
No 1
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.6e-90 Score=835.83 Aligned_cols=1080 Identities=41% Similarity=0.589 Sum_probs=713.0
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHHHHHHHhhCCCC------
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG------ 106 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~~e~l~~~~~~~------ 106 (1196)
.+++.|.++++++||..+|.+++...+|.+++|++-|...|...+++-. ||+|||-|.+.+||+|.+.-+..
T Consensus 49 ~~~~~lh~~~~~~yp~~kp~i~lk~~~~~~d~~i~~L~~~l~~~~~~~~--G~~~i~eLa~~vqefl~~~~~~~~~~~dr 126 (1351)
T KOG1035|consen 49 KLSGRLHVKCKRKYPYSKPEIKLKDHQGVSDEDIELLSNELTALAKTLR--GEVMIAELASIVQEFLKDHQDRPSGFHDR 126 (1351)
T ss_pred HHhhHhhhhhccccCCCCccccccccccchHHHHHHHHHHHHHhhcccc--ccEEeeeHhhhhHHHHhccCCCCCcchHH
Confidence 5788999999999999999999999999999999999999999999999 99999999999999997654411
Q ss_pred --------cc-----ccCCCCccc--------------------ccccccccCccccc----------------------
Q 000993 107 --------QS-----NESVPGLVT--------------------ESSSQSFEGSAVSA---------------------- 131 (1196)
Q Consensus 107 --------~~-----~~~~~~~~~--------------------~~~~~~~~~~~~~~---------------------- 131 (1196)
++ ++...+... +.++.+|-|-.|=.
T Consensus 127 ~~~~~rr~~~~~~~~~q~ele~~~~e~~~~g~p~~~~~~~~t~~e~~~~~~~~~~vy~~ls~~~~~~l~l~k~~~~~qs~ 206 (1351)
T KOG1035|consen 127 MLQDIRRQYSKLMDYEQDELEAREIERCQRGSPRKTMSLQGTREESHGNIFYGKRVYPILSHLTQGTLLLVKWVEQAQSL 206 (1351)
T ss_pred HHHHHHHHHHhhhhhhhccHHHhhhHhhccCCcchhhhhcCCCCCCcccceecceeeeeeccccCceEEEEehhhhHHhh
Confidence 11 011111111 11122222211111
Q ss_pred --------------------------------ccccccCCCeeEEeeeccccCCCccc-----ccccccCCCCcccCCCC
Q 000993 132 --------------------------------SKSCSSKVPFVYGFIDLFSGCGESWH-----WGLGIDENRGVVPSVPS 174 (1196)
Q Consensus 132 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 174 (1196)
..-+-.++.++||+.++|.| |- |=..-.++++.+-+|-+
T Consensus 207 ~~~~~~s~~~~~~~~~k~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g----~~~~v~~~~~s~~~~~~~~q~v~~ 282 (1351)
T KOG1035|consen 207 SEPIEISHDYESTPCGKKEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRG----IVLDVLQEICSKVELRSLLQSVGS 282 (1351)
T ss_pred cCcccccCcccCccchHHHHHHHHHHHHHHHhhccccccceeEEeehhhcch----HHHHHHHhhcCccchHHHHhhccc
Confidence 11233467778888888877 31 22233455555555444
Q ss_pred CCCCCCcchhh--hh-hhccCCCcccccCCCCccccccCCcccccc-------ccccC--CCCceeccCCCCCCCchhcc
Q 000993 175 HASDGSNYEVM--WR-KIDKNVKPLMIPDANQGTALIPSAKLDTVK-------EENED--DNRSISTTDSSTSPMEEWVE 242 (1196)
Q Consensus 175 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~ 242 (1196)
|.. +.. |. ++. .|++.+-+..++++. +++-+ ++.-+|-+|-..
T Consensus 283 i~~-----~~~r~~~~~~~------------~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~s-------- 337 (1351)
T KOG1035|consen 283 IPL-----ETLRILHQKLL------------EGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDS-------- 337 (1351)
T ss_pred cCH-----HHHHHHHHHHh------------hhHHHHHHhccceeEEecccccccccCccceeecchhhhcc--------
Confidence 432 221 11 111 233333333444433 11111 111111111110
Q ss_pred cccccccccchhhccCCCCCCCCccccccccccccccCCcccchhhhhHHHHHHHHHHhhcccCCCcccHHHHHHHHHh-
Q 000993 243 NGIKGENRDSLLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYN- 321 (1196)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~~~~~~~~~~l~~- 321 (1196)
++... ++..+.+.+...-.+.-+.+-+.-......++|+..+++.+.-..+...+.........+-.
T Consensus 338 -----------s~~l~-d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~ 405 (1351)
T KOG1035|consen 338 -----------SKPLP-DNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVL 405 (1351)
T ss_pred -----------cccCC-CcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccc
Confidence 11111 11222223222334444444455555556667777777766555555444222111111100
Q ss_pred ----cCCCCccccCcCCCCcccccchhhHHHhh---hhccc--------cccCCcCCCCCCCCCCCCCCCCcccCCceEE
Q 000993 322 ----LGIFSERGRDLASKPSSQFNKTFNQVFHQ---KMVSS--------RVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL 386 (1196)
Q Consensus 322 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 386 (1196)
+......-.......+.....-+...+-. .+.++ ...+.+.+.....++ .....+||+++|+++
T Consensus 406 ~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~s~-~~r~~SRY~~DFEEL 484 (1351)
T KOG1035|consen 406 STSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNESSEFAPNDETSVPQFRLRFSGAMSP-LQRQFSRYLNDFEEL 484 (1351)
T ss_pred cchhhhhhhhhhcchhhhhccchhhhhhchhcccccccccccccCccccccCccCCCCccccCc-cccchhhHhhhhHHH
Confidence 00000000000000111100000000000 00000 011111111111111 122337999999999
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc----
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM---- 462 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~---- 462 (1196)
+.||+||||.||+|+++.+|+.||||+|+.+. +......+.+|++.|++|+|||||+||.+|+|.....-..+..
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~ 563 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDS 563 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccch
Confidence 99999999999999999999999999999876 6677788999999999999999999999999965411000000
Q ss_pred --C--C-----------------C-----------Ccccccccc------------------cc------cc--------
Q 000993 463 --W--G-----------------S-----------GTLASSTFS------------------NR------AA-------- 478 (1196)
Q Consensus 463 --~--~-----------------~-----------g~~~~~~~~------------------~~------~~-------- 478 (1196)
| . + +...+..+. ++ +.
T Consensus 564 ~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d 643 (1351)
T KOG1035|consen 564 ESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILD 643 (1351)
T ss_pred hhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccC
Confidence 0 0 0 000000000 00 00
Q ss_pred ---c-cccccccccccc-------ccEEEEEeeecCCCHHHHHhhcCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccCC
Q 000993 479 ---S-SADVTGQENKLE-------STYLYIQMEYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDL 545 (1196)
Q Consensus 479 ---~-~~~v~~~~~~~~-------~~~l~iVmEy~~gsL~~~l~~~~~l--~e~~~~~i~~qIa~gL~yLHs~gIiHrDL 545 (1196)
. +..+...++..+ ...+||.||||+.++.+.+..++.+ ....+|+++++|++||+|+|++|||||||
T Consensus 644 ~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDL 723 (1351)
T KOG1035|consen 644 DTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDL 723 (1351)
T ss_pred cchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccC
Confidence 0 000011111112 3789999999998766666555555 48899999999999999999999999999
Q ss_pred CcCcEEecCCCCeEEeccCcchhccc--cccccCCC-CCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchhHH
Q 000993 546 TPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAA-FPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYS 620 (1196)
Q Consensus 546 Kp~NILld~~~~vKL~DFGlA~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDVwS 620 (1196)
||.||+++++++|||+|||+|+.... ....+... .....+....+.|+.+||.-|+|||++.+.. .|+.|+||||
T Consensus 724 KP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYS 803 (1351)
T KOG1035|consen 724 KPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYS 803 (1351)
T ss_pred CcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHH
Confidence 99999999999999999999997431 11111111 1112333344678899999999999998866 6999999999
Q ss_pred HHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 621 LGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 621 lGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
|||||+||++||.+.|++...+..++ .+.+|.. +.+..+...++|++||++||++||||.++|++.|++....++.
T Consensus 804 LGIVlFEM~yPF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llppe~~el~ 882 (1351)
T KOG1035|consen 804 LGIVLFEMLYPFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPPEESELL 882 (1351)
T ss_pred HHHHHHHHhccCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCccchHHH
Confidence 99999999999999999999999988 8888877 6777788899999999999999999999999999996433333
Q ss_pred HHHHHhcCCCCCCcchhhhccccccchhhhhhcccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCcccccc
Q 000993 698 DNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIE 777 (1196)
Q Consensus 698 ~~~~~~~~~~~d~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP 777 (1196)
...+......+...+.......++++...+..+..-. +.--.+++.+....+++++...+.++|++||+.++.||
T Consensus 883 -~~~~h~~~~~~~k~~~~~~~~~~~q~~~~~~n~~yd~----~~~~~~~~~~~~~~l~~~v~e~~~~ifr~Hga~~l~tp 957 (1351)
T KOG1035|consen 883 -VFLQHLYIEQLGKAYKNLLQLIFEQEVLEVLNHQYDL----DRLSYIQYTEINNELREYVVEEVVKIFRKHGAIELETP 957 (1351)
T ss_pred -HHHHHHHHHHHHHHHhchhhHHHHHhhhhhhcccccc----ccccccccchhHHHHHHHHHHHHHHHHHHhcceeccCC
Confidence 3333333333444555555556666665554433222 11245788888999999999999999999999999999
Q ss_pred ceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEecCeeecCCCCCCCcceeEeEEEEeCCC
Q 000993 778 PMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 857 (1196)
Q Consensus 778 ~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~ 857 (1196)
++.+.....-...+.+.+.|++|-.+.|-.|++.|+||+++.|...-+|+|.++.|||.+... ..++++||+++|||..
T Consensus 958 p~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~DLr~pfar~vs~N~~~~~Kry~i~rVyr~~~~~-hP~~~~ec~fDii~~t 1036 (1351)
T KOG1035|consen 958 PLSLRNACAYFSRKAVELLDHSGDVVELPYDLRLPFARYVSRNSVLSFKRYCISRVYRPAIHN-HPKECLECDFDIIGPT 1036 (1351)
T ss_pred ccccccccchhccceeeeecCCCCEEEeeccccchHHHHhhhchHHHHHHhhhheeecccccC-CCccccceeeeEecCC
Confidence 986665555567788999999999999999999999999999988899999999999997755 7788999999999988
Q ss_pred CccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHH
Q 000993 858 SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQL 937 (1196)
Q Consensus 858 ~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~ 937 (1196)
.-..|||+|.+|.+++...--+.++.|.|||..++++++..+|++++++..+..++...-..+.....-...|-.+.+..
T Consensus 1037 ~sl~~AE~L~vi~Ei~~~~l~~~n~~i~lnH~~LL~Ai~~~~~i~~~~r~~v~~~l~~~~~~r~~~~~~~~~~~~~~~~s 1116 (1351)
T KOG1035|consen 1037 TSLTEAELLKVIVEITTEILHEGNCDIHLNHADLLEAILSHCGIPKDQRRKVAELLSDMGSSRPQRSEKELKWVFIRRSS 1116 (1351)
T ss_pred CCccHHHHHHHHHHHHHHHhccCceeEEeChHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhccccHHHHHHHHhhhhHHH
Confidence 77999999999999998853444799999999999999999999999999998888775433211111011111111111
Q ss_pred HHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccc
Q 000993 938 LQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRN 1012 (1196)
Q Consensus 938 ~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG 1012 (1196)
...+.+. ..+........|.. ..+..++..+.....++ +|++| ++..+|+...+.|+.++.+....-.|
T Consensus 1117 ~~~~~l~----~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~vr-~L~eLe~~~~~~~~~~i~~~~~i~~g~~~~~~~~~g 1190 (1351)
T KOG1035|consen 1117 LQLAKLP----EFVLNRLFLVAGRF-QALKLIRGKLRADSLVR-ALKELENVVGLLRSLGIEEHVHIYVGPTESRHRNGG 1190 (1351)
T ss_pred HHhhhhH----HHHHhhhhhhhcch-hhhHHHhhhhhhhHHHH-HHHHHHHHHHHHHHhccccceEEeeccceeEEcCCc
Confidence 1111111 11111111222332 45555555444344445 88888 78889999889999997777777789
Q ss_pred eEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCce
Q 000993 1013 LFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTS 1092 (1196)
Q Consensus 1013 ~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~ 1092 (1196)
++|.+.+..... ..+....++.|||||.++.+|++.. .++ -++|+|... +..+...+..+..+...+..+|
T Consensus 1191 ~~~qi~a~~~~~--~~~~~~~la~GgRyd~~~~~~~~~~---~~~---~p~a~gv~~-~~~~~~~~~~~~~~~~~~~~cd 1261 (1351)
T KOG1035|consen 1191 IQFQITAEIKSN--TSGDPVLLAAGGRYDSLLQEVRDEQ---KMN---LPGAIGVSA-LSTIRQHAPKDLEPIKTPSSCD 1261 (1351)
T ss_pred EEEEEeecccCC--CcCCceeeecccchHHHHHHhhhhh---hhc---Ccccceehh-hHHHHHhhhccccCCCCccccc
Confidence 999998875432 2333346999999999999997732 122 245777652 2222222222333444566899
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEE--cCCCccc
Q 000993 1093 VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRH--LDVKKEK 1170 (1196)
Q Consensus 1093 vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~--l~~g~q~ 1170 (1196)
|+||..+ ...+..++.++++||..||++++.+.+...+.++-.||+..-|.+++++. +++..||. +....+.
T Consensus 1262 vlics~g-~~l~t~~~~l~~~LWs~gI~a~i~~~~s~~~~e~~e~~~~~~i~~iliv~-----n~~~~vks~~~e~~se~ 1335 (1351)
T KOG1035|consen 1262 VLICSRG-SGLLTQRMELVAKLWSKGIKAEIVPDPSPSLEELTEYANEHEITCILIVT-----NQKEKVKSFELERKSEK 1335 (1351)
T ss_pred EEEEecC-CchHHHHHHHHHHHHHcCcccceeeCCCcchHHHHHHHhcCceEEEEEEe-----cceeeechhHHhhhhhh
Confidence 9999997 77889999999999999999999999888999999999988888888876 45555554 4444566
Q ss_pred ccchHHHHHHHHHHH
Q 000993 1171 EVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1171 ~v~~~el~~~l~~~l 1185 (1196)
.+-..+|++++.+.+
T Consensus 1336 ~~~~~elv~f~~~~~ 1350 (1351)
T KOG1035|consen 1336 VVGRTELVEFLLQAL 1350 (1351)
T ss_pred hhhHHHHHHHHHHhh
Confidence 677788888876653
No 2
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.4e-75 Score=671.01 Aligned_cols=408 Identities=21% Similarity=0.294 Sum_probs=350.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..+++|++.++++|++|||.+|.||+| ++.++ |+. ..++||.|.|++||.++||||+|
T Consensus 5 ~~prG~~D~lp~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~T 84 (429)
T COG0124 5 QRPRGTRDFLPEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELT 84 (429)
T ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEEecccCc
Confidence 45899999999999999999999999999999999999999 44444 665 57999999999999999999999
Q ss_pred HHHHHHHHhCCC---CceeEEEecCeeecCCCCCCCcc-eeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEe
Q 000993 811 LPFIRWAISNQK---SSFKRYEISSVYRRAIGHSPPNR-YLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL 886 (1196)
Q Consensus 811 ~~iaR~~a~~~~---~P~r~~Y~G~VfR~e~~~~~~~e-f~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~L 886 (1196)
+|+||++++|.. .|+|+||+|+|||||+||.||+| |+|+|+|+||.+++.+|||||+|+.++|++||+.+ ++|+|
T Consensus 85 apv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi~l~~~~l~~lGi~~-~~l~i 163 (429)
T COG0124 85 APVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVIALAVEILEALGIGG-FTLEI 163 (429)
T ss_pred HHHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHHHHHHHHHHHcCCCc-EEEEE
Confidence 999999998753 59999999999999999988876 99999999999999999999999999999999997 99999
Q ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHH
Q 000993 887 NHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL 966 (1196)
Q Consensus 887 g~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l 966 (1196)
||+++++++++.+|+ +.++.+.++|+++++. + +..+.+........+.+..|. ...+...+++
T Consensus 164 N~~g~l~~~~~~~gi--~~~~~l~~~ldk~~k~-------------~-~~~L~e~~~~r~~~n~lr~ld-~k~~~~~~~~ 226 (429)
T COG0124 164 NSRGILEGRLEYLGI--DQREALLRYLDKLDKI-------------G-KLELDEDSKRRLKTNPLRVLD-SKKDSDQELL 226 (429)
T ss_pred cCcccHHHHHHhhcc--hhHHHHHHHHhhhhhH-------------H-HHHhhhhhhhhhhhchHHHHH-hccchHHHHH
Confidence 999999999999999 7788999999987732 1 122222333333455555554 2334445556
Q ss_pred HHHhccCCC-ChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 967 PRLRGALPA-DKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 967 ~~l~~~~~~-~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+.+..++.. +....+.++++ +|.++|+ .+.+|++++||||||||+|||++..+.+ .+++||||||||+|
T Consensus 227 ~~ap~i~~~~~~e~~~~~~~v~~~L~~~g~--~~~id~~lvRGLDYYtg~VFE~~~~~~~------~~~sI~gGGRYD~L 298 (429)
T COG0124 227 KNAPELLDYLDEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG------AQGSVCGGGRYDGL 298 (429)
T ss_pred hccHHhhhhccHHHHHHHHHHHHHHHHcCC--CEEEccceecchhhccceEEEEEEcCCc------cccceecCccchHH
Confidence 666555542 33567777777 8999995 4999999999999999999999998644 35789999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
++.||++ ++||||||+|+|||+.+|...........+++|+|++.+ ++...+|+.+|++||++|++|++
T Consensus 299 v~~~gG~----------~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~g~~~~~ 367 (429)
T COG0124 299 VEEFGGK----------PTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLG-EDAEPEALKLAQKLRAAGISVEV 367 (429)
T ss_pred HHHhCCC----------CCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcC-chhHHHHHHHHHHHHHcCCcEEE
Confidence 9999875 579999999999999998854333334678899999997 55568999999999999999999
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
++. .+++++|++||++.|++++||+|++|+++|+|+||||.+|+|..++++++++.++..
T Consensus 368 ~~~-~r~~k~q~k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~eq~~v~~~~~~~~~~~~ 427 (429)
T COG0124 368 DYS-GRKLKKQFKYADKLGARFAVILGEDELANGVVTVKDLATGEQEEVPLDELVEELKEL 427 (429)
T ss_pred Eec-cccHHHHHHHHHHCCCCEEEEEcchHHhcCCEEEeeCCCCccceecHHHHHHHHHhh
Confidence 888 677999999999999999999999999999999999999999999999999988765
No 3
>KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-73 Score=628.40 Aligned_cols=429 Identities=27% Similarity=0.448 Sum_probs=384.3
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
.-+.|+|++||.|.++.++++|.+.+.++|++||++.|+||+| ++.++..+..+.+|.|.|++|+.++||||+|+|
T Consensus 59 ~lKtPKGTrD~~p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEdskLiYdlkDQGGEl~SLRYDLTVP 138 (518)
T KOG1936|consen 59 SLKTPKGTRDFSPEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGEDSKLIYDLKDQGGELCSLRYDLTVP 138 (518)
T ss_pred eecCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccccceeEehhhcCCcEEEeecccccH
Confidence 4478999999999999999999999999999999999999999 777884444599999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeeecCCC---CCCCcceeEeEEEEeCCCC-ccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISNQKSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGAS-ALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~~~~P~r~~Y~G~VfR~e~~---~~~~~ef~Q~GvEiiG~~~-~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||++|+|+...+|+|++++|||+++| ++|+|||+||+++|.|.-+ ..+|+|+|.++.++|+.|||.+ |.|++||
T Consensus 139 fARylAmNki~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd-~~iKvNh 217 (518)
T KOG1936|consen 139 FARYLAMNKITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGD-YGIKVNH 217 (518)
T ss_pred HHHHHHHcccccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccc-eEEEecH
Confidence 999999998889999999999999887 3566679999999999554 5899999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|+|++.-+.++..++++| |.+|++|++|+..++|++++.++.+..++ .+.|. .+.+++
T Consensus 218 RkiLdgmf~v~GVp~~~frtICSsIDKLd---------K~pwedVkkEmv~eKGlsee~ad~igeyv-~~~g~-~eL~e~ 286 (518)
T KOG1936|consen 218 RKILDGMFAVCGVPEDKFRTICSSIDKLD---------KMPWEDVKKEMVFEKGLSEEAADRIGEYV-SLKGL-DELLEK 286 (518)
T ss_pred HHHHHHHHHHhCCCHHHhhhHHHhhhhhh---------cCCHHHHHHHHHHhcCCCHHHHHHHHHHh-hhccH-HHHHHH
Confidence 99999999999999999999999999988 78999999999999999999999999999 56666 666777
Q ss_pred Hhc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC--CCc---------ccccc
Q 000993 969 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE--KYP---------ATLVE 1030 (1196)
Q Consensus 969 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~--~~~---------~~~~~ 1030 (1196)
+.. .+..|+...+++++| +++.+|+.++|.||+|++||||||||+|||++..+. ..| ...+.
T Consensus 287 l~~d~~l~~n~~a~eal~dlk~Lf~y~~~fg~s~~isfDlSLARGLDYYTGvIyEav~~~~~~~~~a~~~~~~~~~e~~~ 366 (518)
T KOG1936|consen 287 LIADPKLSQNEAAKEALADLKQLFEYLEIFGISERISFDLSLARGLDYYTGVIYEAVLRGLRLICPAGRYDQAGSTEPGG 366 (518)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHcCCcceEEeehHHhccchhhhceeeeeeeccccccCcchhhhccccccCCC
Confidence 764 356788888998888 889999999999999999999999999999998651 111 12234
Q ss_pred ccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCC---CCCCCCCceEEEEEcCCCchHHHH
Q 000993 1031 GTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK---PVRNEAGTSVLVCSRGGGGLLVER 1107 (1196)
Q Consensus 1031 ~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~---~~~~~~~~~vlv~~~~~~~~~~~a 1107 (1196)
.++||+|||||+|+++|+.. +..+|+||+++|++||+.+|++... .......++|+|.... ...+.++
T Consensus 367 vGSvaaGGRYDnLv~mf~~k--------~~~vPcvG~S~GVeRiFsile~r~~~~~~~iR~t~t~V~V~~~~-k~~l~eR 437 (518)
T KOG1936|consen 367 VGSVAAGGRYDNLVGMFDKK--------GDKVPCVGQSVGVERIFSILEQRAATVATKIRTTETQVYVAAAG-KNLLFER 437 (518)
T ss_pred ccccccCcchhhHHHHhccc--------cCcCCccceeehHhHHHHHHHHHHHhhhhccccCceEEEEEecC-CchHHHH
Confidence 57899999999999998642 3468999999999999999874322 2234678899998886 7789999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1108 ~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
+++.+.||..||.+|+.++.++++.+|+.||.+.|||++|++|++|+++|.|+||++.+++.+.+++++++..|+++++
T Consensus 438 ~k~v~~Lw~agI~aE~~yk~~~~~~~q~~~~e~~~ip~~vi~Ge~El~~G~V~vk~~~~re~~~v~~e~~v~~l~~~l~ 516 (518)
T KOG1936|consen 438 LKVVNALWDAGIKAEYLYKANPKLLKQFQYAEEAGIPLAVILGEEELADGSVKVKNVGTREEVLVKREQFVSELKDLLS 516 (518)
T ss_pred HHHHHHHHhcCcchhhhhhcCccHHHHHHHHHhcCCCeEEEechhhhcCCeEEEEecccccceeccHHHHHHHHHHHhc
Confidence 9999999999999999998889999999999999999999999999999999999999999999999999999998864
No 4
>PLN02972 Histidyl-tRNA synthetase
Probab=100.00 E-value=7.3e-72 Score=677.14 Aligned_cols=418 Identities=25% Similarity=0.403 Sum_probs=368.2
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
+.+.|+|++|++|.++..+++|++.++++|++|||++|+||+| .+.++ +++ .++||+|.|++|+.++||||+|+
T Consensus 326 ~~k~PkGtrD~lP~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged-~k~mY~f~D~gGr~LaLRPDlTv 404 (763)
T PLN02972 326 LPKIPKGTRDFAKEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGED-SKLIYDLADQGGELCSLRYDLTV 404 (763)
T ss_pred ccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcc-hhheEEEECCCCCEEEeCCCChH
Confidence 4488999999999999999999999999999999999999999 34444 444 57899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 812 PFIRWAISNQKSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 812 ~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
||||++++|...|+|+||+|+|||+++|+++|+ ||+|+|+||||.. +..+|+|||.+++++|+.||+.+ ++|+|||+
T Consensus 405 PiAR~vA~n~~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~d-f~I~INh~ 483 (763)
T PLN02972 405 PFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGT-YEVKLNHR 483 (763)
T ss_pred HHHHHHHhCCCCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCc-eEEEeCCH
Confidence 999999998777999999999999999987766 5999999999974 45789999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.+|++++..+.++.++++++ +.++++++++++...+++++.++.+..++ .+.|++.++++++
T Consensus 484 ~iL~~ILe~lgi~~e~~~~v~~aIdkld---------k~~le~vk~eL~~~~gLs~e~~~~L~~L~-~L~G~~~evLd~L 553 (763)
T PLN02972 484 KLLDGMLEICGVPPEKFRTICSSIDKLD---------KQSFEQVKKEMVEEKGLSNETADKIGNFV-KERGPPLELLSKL 553 (763)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhh---------hhhHHHHHHHHhhhcCCCHHHHHHHHHHH-HhcCCHHHHHHHH
Confidence 9999999999999998899999999887 56788888899888899999999999998 6888878888888
Q ss_pred hcc---CCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 970 RGA---LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 970 ~~~---~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
+.. +..++...+++++| ++..+|+.++|.||++++||++||||+|||+|..+.+ .++||+|||||
T Consensus 554 ~~~~~~l~~~~~~~~aL~eL~~L~~~L~~~gv~~~I~fDlsLvRGLDYYTGiVFE~~~~g~~-------~gsIagGGRYD 626 (763)
T PLN02972 554 RQEGSEFLGNASSRAALDELEIMFKALEKSKAIGKIVFDLSLARGLDYYTGVIYEAVFKGAQ-------VGSIAAGGRYD 626 (763)
T ss_pred HHhhHhhccChHHHHHHHHHHHHHHHHHhcCCCccEEECCcccCCCcccCceEEEEEEcCCc-------cceeeecCCch
Confidence 753 34566677777777 7788898888999999999999999999999987532 24799999999
Q ss_pred hhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCC-C--CCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcC
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK-P--VRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1118 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~-~--~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~G 1118 (1196)
+|+++||++ ++||||||||+|||+.+|.+... . ...+.+++|+|++.+ ++.+.++++++++||++|
T Consensus 627 ~Lv~~FgG~----------~vPAVGFSiGIERL~~~L~~~~~~~~~~~~~~~~dVlV~s~g-~~~l~~alkia~~LR~aG 695 (763)
T PLN02972 627 NLVGMFSGK----------QVPAVGVSLGIERVFAIMEQQEEEKSQVIRPTETEVLVSIIG-DDKLALAAELVSELWNAG 695 (763)
T ss_pred hHHHhcCCC----------CCCEEEEEecHHHHHHHHHHcccCCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHHCC
Confidence 999999653 57999999999999988863221 1 123355789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1119 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1119 i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|+|++.. .++++++++||++.|++++||+|++|+++|+|+||||.+++|..+++++++++|++++.
T Consensus 696 I~aE~~~--~~kl~kq~~~A~k~gi~~vVIIGe~E~~~g~VkVKnL~tgeq~~V~~delv~~l~~~l~ 761 (763)
T PLN02972 696 IKAEYKV--STRKAKHLKRAKESGIPWMVLVGEKELSKGFVKLKNLEAGVEEEVDRTCFVQELKAELL 761 (763)
T ss_pred CEEEEeC--CCCHHHHHHHHHHCCCCEEEEECchHHhCCeEEEEECCCCcceEeeHHHHHHHHHHHhc
Confidence 9999644 46899999999999999999999999999999999999999999999999999988774
No 5
>PLN02530 histidine-tRNA ligase
Probab=100.00 E-value=1.7e-67 Score=634.92 Aligned_cols=404 Identities=19% Similarity=0.232 Sum_probs=346.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|+|++|++|.++.+++++++.++++|++|||++|.||+| ++... |++..++||+|.|++|+.++||||+|+|+
T Consensus 71 ~~p~G~~D~lp~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LRpD~T~~i 150 (487)
T PLN02530 71 NPPKGTRDFPPEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALRPELTPSL 150 (487)
T ss_pred CCCCCcCcCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecCCCCcHHH
Confidence 57999999999999999999999999999999999999999 44444 77788999999999999999999999999
Q ss_pred HHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCC-ceEEEeCc
Q 000993 814 IRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCDIHLNH 888 (1196)
Q Consensus 814 aR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~-~~~i~Lg~ 888 (1196)
||+++++. ..|+|+||+|+|||++++|.++. ||+|+|+|+||.+++.+|+|||++++++|+.||+++ +++|+|||
T Consensus 151 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~~~~aDaEvi~l~~~~l~~lgl~~~~~~i~i~~ 230 (487)
T PLN02530 151 ARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVTFFKRVGITSSDVGIKVSS 230 (487)
T ss_pred HHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCCCcchhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 99999864 36999999999999999887765 699999999999999999999999999999999972 49999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.++++++.+..++.++++++ +.+.+++++. +...+++.+.++.+..++. +. .+++
T Consensus 231 ~~i~~~~l~~~~~~~~~~~~v~~~~d~l~---------k~~~~~l~~~-L~~~~~~~~~~~~l~~l~~-~~-----~~~~ 294 (487)
T PLN02530 231 RKVLQAVLKSYGIPEESFAPVCVIVDKLE---------KLPREEIEKE-LDTLGVSEEAIEGILDVLS-LK-----SLDD 294 (487)
T ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHhhh---------hccHHHHHHH-HHHcCCCHHHHHHHHHHHh-cc-----CHHH
Confidence 99999999999999988888888888876 4455666555 5668899888888888773 22 3445
Q ss_pred HhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhh
Q 000993 969 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1046 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1046 (1196)
+.+.+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|.... ..++||+|||||+|++.
T Consensus 295 l~~~~~~~~~~l~~L~~l~~~l~~~g~~~~i~~Dl~lvrgldYYTGivFe~~~~~~-------~~~~I~gGGRYD~Li~~ 367 (487)
T PLN02530 295 LEALLGADSEAVADLKQLFSLAEAYGYQDWLVFDASVVRGLAYYTGIVFEGFDRAG-------KLRAICGGGRYDRLLST 367 (487)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHcCCCccEEEecccccCccccCceEEEEEecCC-------CcceeeecccHHHHHHH
Confidence 555443223345555555 888899988899999999999999999999998421 13479999999999999
Q ss_pred ccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeC
Q 000993 1047 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1126 (1196)
Q Consensus 1047 fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~ 1126 (1196)
||++ ++||||||+|++||+.+|.+.........+.+|+|++.+ ++...+|++++++||++|++|+++..
T Consensus 368 fgg~----------~~pAvGFa~g~~~l~~~l~~~g~~p~~~~~~dVlVi~~~-~~~~~~A~~ia~~LR~~Gi~vevd~~ 436 (487)
T PLN02530 368 FGGE----------DTPACGFGFGDAVIVELLKEKGLLPELPHQVDDVVFALD-EDLQGAAAGVASRLREKGRSVDLVLE 436 (487)
T ss_pred hCCC----------CCCeeEEEEhHHHHHHHHHhcCCCCCCCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9754 479999999999998887643222223356789999985 66788999999999999999998887
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1127 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1127 ~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
.++++++++||++.|+++++++|++|.++++|+||||.+|+|..++++++
T Consensus 437 -~~~l~k~ik~A~k~g~~~iviiG~~E~~~~~V~vK~l~sgeq~~v~~~el 486 (487)
T PLN02530 437 -PKKLKWVFKHAERIGAKRLVLVGASEWERGMVRVKDLSSGEQTEVKLDEL 486 (487)
T ss_pred -CCCHHHHHHHHHHCCCCEEEEEchhHHhCCeEEEEECCCCcceEechHHc
Confidence 56899999999999999999999999999999999999999999988775
No 6
>PRK12420 histidyl-tRNA synthetase; Provisional
Probab=100.00 E-value=4.4e-65 Score=607.00 Aligned_cols=402 Identities=21% Similarity=0.340 Sum_probs=342.6
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecCCceEeecCCCcH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++.. .+++..++||+|.|++|+.|+||||+|+
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~LRpD~T~ 84 (423)
T PRK12420 5 RNVKGTKDYLPEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALRYDLTI 84 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceecccccccH
Confidence 46899999999999999999999999999999999999999 3333 2466778999999999999999999999
Q ss_pred HHHHHHHhCC--CCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 812 PFIRWAISNQ--KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 812 ~iaR~~a~~~--~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
||||+++++. ..|+|+||+|+|||+++++.++ +||+|+|+|+||.+++.+|+|||++|+++|+.||+ + ++|+|||
T Consensus 85 ~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~~~~adaEvi~la~~~l~~lg~-~-~~i~l~~ 162 (423)
T PRK12420 85 PFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRRLNL-E-VTIQYNN 162 (423)
T ss_pred HHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCCCCcccHHHHHHHHHHHHHCCC-C-EEEEEcC
Confidence 9999999864 4599999999999998877555 46999999999999999999999999999999999 4 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.++.+..+++.++ +.+++++++.+ .+.+++.+.++.+..|+ .+++. ..++.
T Consensus 163 ~~l~~~il~~~~~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l-~~~~l~~~~~~~l~~l~-~~~~~--~~~~~ 229 (423)
T PRK12420 163 RKLLNGILQAIGIPTELTSDVILSLDKIE---------KIGIDGVRKDL-LERGISEEMADTICNTV-LSCLQ--LSIAD 229 (423)
T ss_pred HHHHHHHHHHcCCChhhhhchhhheechh---------hcCHHHHHHHH-HHcCCCHHHHHHHHHHH-hccCh--hhHHH
Confidence 99999999999999988888877666655 44566665554 45789999999999998 45543 45666
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
++..+ .++.+.+++++| .++.+|+..++.||++++|+++||||+|||+|..+.+. ..+||+|||||+|
T Consensus 230 ~~~~~-~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~Dl~~vr~l~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 302 (423)
T PRK12420 230 FKEAF-NNPLVAEGVNELQQLQQYLIALGINENCIFNPFLARGLTMYTGTVYEIFLKDGSI------TSSIGSGGRYDNI 302 (423)
T ss_pred HHHhc-cCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCcccceeEEEEEecCCCc------cccccCCccHHHH
Confidence 66533 355566666666 78888998889999999999999999999999876321 2369999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHH-cCCeEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE-ENIKAQ 1122 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~-~Gi~ve 1122 (1196)
+++||+. +.++||||||+++|||+.+|..... ...+.+|+|++.+ + ...|++++++||+ .|++|+
T Consensus 303 ~~~f~~~--------~~~~pAvGfa~~~~~l~~~l~~~~~---~~~~~dvlI~~~~-~--~~~a~~ia~~Lr~~~Gi~ve 368 (423)
T PRK12420 303 IGAFRGD--------DMNYPTVGISFGLDVIYTALSQKET---ISSTADVFIIPLG-T--ELQCLQIAQQLRSTTGLKVE 368 (423)
T ss_pred HHHhCCC--------CCCCCceeEEEcHHHHHHHHHhcCC---CCCCceEEEEEcC-C--HHHHHHHHHHHHhhcCCeEE
Confidence 9999652 1357999999999999988763221 2246799999974 3 3579999999999 999999
Q ss_pred EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1123 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1123 l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
++.. .+++++++++|++.|+++++++|++|.++++|+||++.+++|..++++++
T Consensus 369 ~~~~-~~~l~~~i~~A~~~g~~~iviig~~e~~~~~v~vr~~~~~~~~~v~~~~~ 422 (423)
T PRK12420 369 LELA-GRKLKKALNYANKENIPYVLIIGEEEVSTGTVMLRNMKEGSEVKVPLSSL 422 (423)
T ss_pred EecC-CcCHHHHHHHHHHcCCCEEEEEChhHHhcCeEEEEECCCCceeeeeHHHc
Confidence 8887 57999999999999999999999999999999999999999999998875
No 7
>CHL00201 syh histidine-tRNA synthetase; Provisional
Probab=100.00 E-value=3.5e-63 Score=589.95 Aligned_cols=402 Identities=15% Similarity=0.164 Sum_probs=313.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..++++++.++++|++|||++|.||+| ++... |+. ..++||+|.|.+|+.++||||+|
T Consensus 5 ~~p~G~~D~lp~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l~LRpd~T 84 (430)
T CHL00201 5 QAIRGTKDILPDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDITLRPEGT 84 (430)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEEEeCCCCc
Confidence 46899999999999999999999999999999999999999 33333 433 45899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 811 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+++||.+|. ||+|+|+|+||..++.+|+|||.++.++|+.||+++ ++|+
T Consensus 85 ~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~~~~aD~Evi~l~~~~l~~lGl~~-~~i~ 163 (430)
T CHL00201 85 AGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSIDARADTEVIHLAMQIFNELQVKN-LILD 163 (430)
T ss_pred HHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCCChhhHHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999987753 24899999999999999987666 599999999999999999999999999999999986 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH----HHhcCC
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGA 961 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~ 961 (1196)
|||++++... ...++.+..++.... ..++....+.+..++ ......
T Consensus 164 l~~~~~~~~~-------~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~l~~~~~~~l~~k~~~ 213 (430)
T CHL00201 164 INSIGKLEDR-------QSYQLKLVEYLSQYQ-----------------------DDLDTDSQNRLYSNPIRILDSKNLK 213 (430)
T ss_pred ECCCCchhhH-------HHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHhhhHHHhhccCcc
Confidence 9998887631 111122222222210 001111112221111 000001
Q ss_pred hhhHHHHHhccCC-CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 962 ADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 962 ~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
..++++.+..+.. .+....+.|.++ .++.+|+ .+.||++++||++||||+|||+|+...+ ..++|||||
T Consensus 214 ~~~~~~~a~~l~~~~~~~~~~~l~~~~~~l~~~g~--~~~~Dl~lvRgldYYTG~vFE~~~~~~~------~~~~i~gGG 285 (430)
T CHL00201 214 TQEILDGAPKISDFLSLESTEHFYDVCTYLNLLNI--PYKINYKLVRGLDYYNDTAFEIKTLSSN------GQDTICGGG 285 (430)
T ss_pred HHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHcCC--cEEECcccccCCccccccEEEEEECCCC------Ccceeeecc
Confidence 1122322222211 123344555555 6677788 4999999999999999999999986422 234799999
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcC
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1118 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~G 1118 (1196)
|||+|+++||+. ++||||||+|+|||+.+|.+... .+..+.+|+|++.+ ++...+|++++++||++|
T Consensus 286 RYD~L~~~fg~~----------~~PavGfa~g~erl~~~l~~~~~--~~~~~~~v~v~~~~-~~~~~~a~~ia~~LR~~G 352 (430)
T CHL00201 286 RYDSLIHQLGGP----------KTPAVGCAIGLERLLLIAKDNII--LPKQSIDVYIATQG-LKAQKKGWEIIQFLEKQN 352 (430)
T ss_pred chHHHHHHhCCC----------CCCeeEEEecHHHHHHHHhcccc--CCCCCCCEEEEEcC-HHHHHHHHHHHHHHHhCC
Confidence 999999999754 46999999999999998865332 12345789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhccCCC
Q 000993 1119 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPS 1193 (1196)
Q Consensus 1119 i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~~~~~~ 1193 (1196)
++|++++. .+++++++++|++.|+++++++|++|.++++|+||||.+++|..++++++++.+.+....+-=|++
T Consensus 353 i~veid~~-~~~l~k~~k~A~~~~~~~viiiG~~E~~~~~vtvk~l~~~~q~~i~~~~~~~~~~~~~~~~~~~~~ 426 (430)
T CHL00201 353 IKFELDLS-SSNFHKQIKQAGKKRAKACIILGDNEIMDNCITIKWLDEQVQENAQYSNFKQEISYLKKKIAFNKK 426 (430)
T ss_pred CeEEEeeC-CCCHHHHHHHHHHcCCCEEEEEechHHhCCcEEEEECCCCCcEEEcHHHHHHHHHHHHHhhhhhhc
Confidence 99999877 568999999999999999999999999999999999999999999999999999887666544433
No 8
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.2e-60 Score=562.61 Aligned_cols=360 Identities=21% Similarity=0.268 Sum_probs=309.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeec-CCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 812 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|+ +|+.++||||+|+|
T Consensus 4 ~~p~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~LRpD~T~~ 83 (391)
T PRK12292 4 QLPEGIRDLLPEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGLRPDMTAQ 83 (391)
T ss_pred CCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEECCCCcHH
Confidence 56999999999999999999999999999999999999999 33333 66778999999999 89999999999999
Q ss_pred HHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||+++++. ..|+|+||+|+|||+++++.++. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ +.|+|||
T Consensus 84 iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~ 162 (391)
T PRK12292 84 IARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALKALGLPN-FTLDLGH 162 (391)
T ss_pred HHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCCCchHHHHHHHHHHHHHHHcCCCC-eEEEecc
Confidence 999998863 46999999999999998886655 699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.++.++++++++|+ .+. ++++. +++.+.++.+..++ .+.| ..+++++
T Consensus 163 ~~i~~~il~~~~~~~~~~~~l~~~l~~~~~---------~~~----~~~~~--~l~~~~~~~l~~l~-~~~g-~~~~l~~ 225 (391)
T PRK12292 163 VGLFRALLEAAGLSEELEEVLRRALANKDY---------VAL----EELVL--DLSEELRDALLALP-RLRG-GREVLEE 225 (391)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCH---------HHH----HHHHh--cCCHHHHHHHHHHH-HhcC-CHHHHHH
Confidence 999999999999999999999999999873 222 22332 68888899999998 5777 5788888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
++.+.. +..+.+++++| .+..+|+..++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 226 ~~~~~~-~~~~~~~l~~L~~l~~~l~~~~~~~~i~~D~~lvrgl~YYtG~vFe~~~~~~~~--------~i~~GGRYD~L 296 (391)
T PRK12292 226 ARKLLP-SLPIKRALDELEALAEALEKYGYGIPLSLDLGLLRHLDYYTGIVFEGYVDGVGN--------PIASGGRYDDL 296 (391)
T ss_pred HHHhcc-ChHHHHHHHHHHHHHHHHHHhCCCceEEEehhhccCCcCccceEEEEEECCCCC--------cccCCcchhhH
Confidence 887544 55556677776 67777887789999999999999999999999987554 59999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||. ++||||||+++|||+.+ . . . ....+.+++|+..+ +....+|++++++||+.|++|++
T Consensus 297 ~~~fg~-----------~~pAvGfai~ldrl~~~-~-~--~-~~~~~~~~~v~~~~-~~~~~~a~~~~~~Lr~~G~~~~~ 359 (391)
T PRK12292 297 LGRFGR-----------ARPATGFSLDLDRLLEL-Q-L--E-LPVEARKDLVIAPD-SEALAAALAAAQELRKKGEIVVL 359 (391)
T ss_pred HHHcCC-----------CCCCceEEeeHHHHHhh-c-c--c-cccccCCcEEEEeC-cccHHHHHHHHHHHHHcCCEEEE
Confidence 998853 46999999999999874 1 1 1 12234567777764 56778899999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDI 1143 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~ 1143 (1196)
... .+++++++++|++.|+
T Consensus 360 ~~~-~~~~~~~~~~a~~~~~ 378 (391)
T PRK12292 360 ALP-GRNFEDAREYARDRQI 378 (391)
T ss_pred ecC-CCChHHHHHHHhhcCe
Confidence 887 5689999999999998
No 9
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=3.7e-58 Score=539.11 Aligned_cols=362 Identities=18% Similarity=0.209 Sum_probs=302.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeec-CCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 812 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+| ++... ++...+.||+|.|+ +|+.++||||+|+|
T Consensus 8 ~~p~G~rD~lp~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LRpD~T~~ 87 (392)
T PRK12421 8 LLPDGVADVLPEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVRADITPQ 87 (392)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEECCcCCHH
Confidence 46999999999999999999999999999999999999999 34444 77778899999999 69999999999999
Q ss_pred HHHHHHhC--CCCceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 813 FIRWAISN--QKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 813 iaR~~a~~--~~~P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
|||+++++ ...|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|||.++.++|+.||+++ ++|+|||+
T Consensus 88 iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~~~~aDaEvi~l~~e~l~~lgi~~-~~l~ig~~ 166 (392)
T PRK12421 88 VARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHAGIEADLEIIRLMLGLLRNAGVPA-LHLDLGHV 166 (392)
T ss_pred HHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCH
Confidence 99998876 356999999999999988774 445699999999999999999999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.+|++++.++++.++++++++. ++ .+++.+.+++.+.++.+..++ .+.|+. +.++++
T Consensus 167 ~i~~~il~~l~l~~~~~~~l~~~l~kk~~~------------~l-~~~~~~~~~~~~~~~~l~~L~-~~~g~~-~~l~~~ 231 (392)
T PRK12421 167 GIFRRLAELAGLSPEEEEELFDLLQRKALP------------EL-AEVCQNLGVGSDLRRMFYALA-RLNGGL-EALDRA 231 (392)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCHH------------HH-HHHHHhcCCCHHHHHHHHHHH-HhcCCH-HHHHHH
Confidence 999999999999999999999999988732 22 345555788888888899998 577764 456665
Q ss_pred hccCC-CChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 970 RGALP-ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 970 ~~~~~-~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
...+. .++.+.+++++| .+..++....+.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l~~~l~~~~~~~~~~~DlslvrgldYYTG~vFe~~~~~~~~--------~i~~GGRYD~L 303 (392)
T PRK12421 232 LSVLALQDAAIRQALDELKTLAAHLKNRWPELPVSIDLAELRGYHYHTGLVFAAYIPGRGQ--------ALARGGRYDGI 303 (392)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHhhCCCceEEEeeccccCCCCcCCCEEEEEECCCCC--------cccCCCCccch
Confidence 55443 567788888888 44555445569999999999999999999999987543 69999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||. +.||||||+|+|||+.++... . ..++++++.+ +. ..+++++++||++|++|++
T Consensus 304 ~~~fg~-----------~~pAvGfai~lerL~~~l~~~-----~--~~~~~~~~~~-~~--~~~~~~a~~LR~~G~~~~~ 362 (392)
T PRK12421 304 GEAFGR-----------ARPATGFSMDLKELLALQFLE-----E--EAGAILAPWG-DD--PDLLAAIAELRQQGERVVQ 362 (392)
T ss_pred hHhhCC-----------CCCCceEEeeHHHHHhhcccc-----c--CCceEEeecC-Cc--HHHHHHHHHHHhCCCEEEE
Confidence 998864 369999999999999876421 1 1266777764 32 5688999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDT 1152 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~ 1152 (1196)
.+.. ...+| +.++...++++++
T Consensus 363 ~~~~------~~~~~-~~~~~~~~~~~~~ 384 (392)
T PRK12421 363 LLPG------DDGSS-EPGCDHRLVLQDG 384 (392)
T ss_pred eCCC------cchhH-HhCCCeEEEEECC
Confidence 7652 23345 6699999998855
No 10
>TIGR00442 hisS histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff.
Probab=100.00 E-value=3.1e-57 Score=537.20 Aligned_cols=380 Identities=21% Similarity=0.283 Sum_probs=311.4
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCcH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++. ..++||+|.|++|+.++||||+|+
T Consensus 2 ~p~G~~d~~p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 81 (397)
T TIGR00442 2 APRGTRDFLPEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTLRPEGTA 81 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEeecCCCcH
Confidence 5899999999999999999999999999999999999999 33332 232 458999999999999999999999
Q ss_pred HHHHHHHhCC---CCceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 812 PFIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 812 ~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
|+||+++++. ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ ++|+||
T Consensus 82 ~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~~~~~d~E~i~l~~e~l~~lg~~~-~~i~i~ 160 (397)
T TIGR00442 82 PVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEIIALAAEILKELGIKD-FTLEIN 160 (397)
T ss_pred HHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCCCHHHHHHHHHHHHHHHHHcCCCc-eEEEec
Confidence 9999998863 459999999999999877654 45799999999999999999999999999999999985 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHh-cCCcHHHHHHHHHHHHHhcCChhhH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQE-LNLAEAVVNRLQTVGLRFCGAADQA 965 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~-~~l~~~~~~~l~~l~~~~~g~~~~~ 965 (1196)
|+++++++++ .++.+.++|++ +|++. .+.+ .+++.. .++.++..+.+..++. .. ..+
T Consensus 161 ~~~i~~~~~~-------~~~~l~~~l~~~~~~~~---------~~~~-~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~ 219 (397)
T TIGR00442 161 SLGILEGRLE-------YREALLRYLDKHLDKLG---------EDSV-RRLEKNPLRILDSKNEKIQELLK---EA-PKI 219 (397)
T ss_pred CcccHHHHHH-------HHHHHHHHHHHhHhhcC---------HHHH-HHHhhccccCchhhhHHHHHHHh---cC-HHH
Confidence 9999999987 36778888888 56432 2222 233332 4566666667766652 11 122
Q ss_pred HHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 966 LPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 966 l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+ .....+.|+++ .++.+|+ .+.|||+++|+++||||+||++|..+.+. ..+||+|||||+|
T Consensus 220 ~~~~------~~~~~~~l~~l~~~l~~~~~--~i~~dl~~~r~~~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 285 (397)
T TIGR00442 220 LDFL------DEESRAHFEELKELLDALGI--PYKIDPSLVRGLDYYTGTVFEFVTDELGA------QGTICGGGRYDGL 285 (397)
T ss_pred HHHh------hHHHHHHHHHHHHHHHHcCC--CEEECCccccCchhhcceEEEEEECCCCc------cceeeeccchHHH
Confidence 2221 23455566666 7777888 49999999999999999999999876431 2479999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||+. +.||||||+++|||+.++...........+.+|+|++.+ ++...++++++++||++|++|++
T Consensus 286 ~~~f~~~----------~~~avGfs~~~~~l~~~l~~~~~~~~~~~~~~vlV~~~~-~~~~~~~~~i~~~Lr~~gi~v~~ 354 (397)
T TIGR00442 286 VEELGGP----------PTPAVGFAIGIERLLLLLEELGLEPPEESSPDVYVVPLG-EEAELEALKLAQKLRKAGIRVEV 354 (397)
T ss_pred HHHhCCC----------CCceEEeeecHHHHHHHHHhcCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999653 369999999999999988643322222456789999875 66788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
.+. .+++++++++|++.|++++|++|++|.+.++|+|||+.+|
T Consensus 355 ~~~-~~~l~k~~~~a~~~g~~~~i~ig~~e~~~~~v~vrnl~~~ 397 (397)
T TIGR00442 355 DLG-GRKLKKQLKYADKLGARFAVILGEDELANGTVTLKDLETG 397 (397)
T ss_pred eCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEeCCCC
Confidence 877 5789999999999999999999999999999999999875
No 11
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=1.3e-56 Score=534.54 Aligned_cols=381 Identities=19% Similarity=0.279 Sum_probs=301.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cccc---ccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQF---KRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~---~~~my~f~D~~G~~laLRPD~T 810 (1196)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... +... .++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpd~T 84 (412)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLTLRPEGT 84 (412)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEEecCCCc
Confidence 57899999999999999999999999999999999999999 33333 3332 6899999999999999999999
Q ss_pred HHHHHHHHhCCCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc-
Q 000993 811 LPFIRWAISNQKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH- 888 (1196)
Q Consensus 811 ~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~- 888 (1196)
+|+||+++++...|+|+||+|+|||+++++.++ +||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.|.|||
T Consensus 85 ~~~ar~~~~~~~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~~~~~d~E~i~~~~~~l~~lg~~~-~~~~l~~~ 163 (412)
T PRK00037 85 APVVRAVIEHKLQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEVIALAADILKALGLKG-LKLLINSL 163 (412)
T ss_pred HHHHHHHHhCCCCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCCCcchhHHHHHHHHHHHHHcCCCc-eeeeeccC
Confidence 999999998766999999999999998776544 5699999999999999999999999999999999985 8886555
Q ss_pred ---------HHHHHHHHHHcCCCHH---HHHHHH-HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 000993 889 ---------GDLLEAIWSWAGIKAE---HREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 955 (1196)
Q Consensus 889 ---------~~i~~~~l~~lgl~~~---~~~~l~-~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 955 (1196)
+++++++++. ++++- .++.+. .++...++ .. .
T Consensus 164 ~~~~~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~----------------------~~--~---------- 208 (412)
T PRK00037 164 GDFEIRANYRKALVGFLEK-GLDELDEDSKRRLETNPLRILDK----------------------KD--K---------- 208 (412)
T ss_pred CCHHHhHHHHHHHHHHHHh-CchhhchHHHHHHhhCchhhhcc----------------------cc--h----------
Confidence 4555555554 33320 000000 00001110 00 0
Q ss_pred HHhcCChhhHHHHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccc
Q 000993 956 LRFCGAADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1032 (1196)
Q Consensus 956 ~~~~g~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~ 1032 (1196)
+. .+.++.+..+. ..+....+++++| +++.+|+ ++.||++++||++||||+|||+|..+.+. .+
T Consensus 209 ----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~i~~Dl~~~r~l~YYtG~vFe~~~~~~g~------~~ 275 (412)
T PRK00037 209 ----ED-QELLKDAPKLLDYLDEESKEHFEELKELLDALGI--PYVIDPRLVRGLDYYTGTVFEFVTDDLGA------QG 275 (412)
T ss_pred ----hh-HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHcCC--CEEECCCcccChhhccceEEEEEECCCCc------cc
Confidence 00 00111100000 0123455666666 6777777 59999999999999999999999865432 25
Q ss_pred ccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHH
Q 000993 1033 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1112 (1196)
Q Consensus 1033 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~ 1112 (1196)
+||+|||||+|+++||+. +.||||||+++|||+.+|.+... .+.+|+|++.+ ++...+|+++++
T Consensus 276 ~i~~GGRYD~L~~~f~~~----------~~pavGfs~~le~l~~~l~~~~~-----~~~~vlI~~~~-~~~~~~a~~i~~ 339 (412)
T PRK00037 276 TVCGGGRYDGLVEQFGGP----------PTPAVGFAIGVERLLLLLEELGE-----EPVDVYVVPLG-EDAELAALKLAE 339 (412)
T ss_pred eeeeccchhHHHHHhCCC----------CCceEEEEEcHHHHHHHHHhcCC-----CCCCEEEEEeC-hHHHHHHHHHHH
Confidence 799999999999999642 46999999999999988764322 46789999985 556788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1113 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1113 ~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+||++|++|++... ++++++++++|+++|++++|++|++|.+.|+|+|||+.+|++..++++++++.|++.+
T Consensus 340 ~Lr~~Gi~v~i~~~-~~~~~~~~~~a~~~gi~~~viig~~e~~~~~v~vr~~~~~~~~~v~~~el~~~i~~~~ 411 (412)
T PRK00037 340 KLRAAGIRVELDYG-GRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDELVEALKELL 411 (412)
T ss_pred HHHHCCCeEEEeCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEECCCCceEEeeHHHHHHHHHHhh
Confidence 99999999998665 5789999999999999999999999999999999999999999999999999988653
No 12
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit. Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit.
Probab=100.00 E-value=1.2e-52 Score=481.34 Aligned_cols=300 Identities=23% Similarity=0.336 Sum_probs=262.6
Q ss_pred cccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC
Q 000993 745 IQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 820 (1196)
Q Consensus 745 ~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~ 820 (1196)
+|++|.++..++.+++.++++|++|||++|.||+| .+...+....++||+|.|++|+.++||||+|+|+||+++++
T Consensus 1 ~D~~p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~ 80 (314)
T TIGR00443 1 RDLLPEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTR 80 (314)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHh
Confidence 58999999999999999999999999999999999 34444336788999999999999999999999999998875
Q ss_pred ---CCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHH
Q 000993 821 ---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 896 (1196)
Q Consensus 821 ---~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l 896 (1196)
...|+|+||+|+|||+++++.++ +||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ +.|.|||+++++.++
T Consensus 81 ~~~~~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~~~~adaEvi~l~~~~l~~lg~~~-~~i~l~~~~il~~il 159 (314)
T TIGR00443 81 LRDRPLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAGGPAADAEVIALLIEALKALGLKD-FKIELGHVGLVRALL 159 (314)
T ss_pred cccCCCCeEEEEeceEeecCCCcCCCcccccccceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCcHHHHHHHH
Confidence 24699999999999998876554 5699999999999999999999999999999999985 999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC
Q 000993 897 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 976 (1196)
Q Consensus 897 ~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~ 976 (1196)
+.+++++++++.++++++++++. . + ++++.+.+++++.++.+..++ .+.|++.+++++++.+. .+
T Consensus 160 ~~~~~~~~~~~~l~~~l~~~~~~---------~---~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~~l~~l~~~~-~~ 224 (314)
T TIGR00443 160 EEAGLPEEAREALREALARKDLV---------A---L-EELLAELGLDPEVRERLLALP-RLRGDGEEVLEEARALA-GS 224 (314)
T ss_pred HHcCCCHHHHHHHHHHHHhcCHH---------H---H-HHHHHhcCCCHHHHHHHHHHH-HhcCChHHHHHHHHHhc-cC
Confidence 99999999999999999998832 1 1 345556789999999999999 67888788999998844 45
Q ss_pred hHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccc
Q 000993 977 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDRE 1051 (1196)
Q Consensus 977 ~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~ 1051 (1196)
..+.+++++| .++.+|+..+|.||++++|+++||||+|||+|..+.+. +||+|||||+|+++||.
T Consensus 225 ~~~~~~l~~l~~~~~~l~~~~~~~~i~~D~~~~r~~~YYtGivFe~~~~~~~~--------~i~~GGRYD~L~~~fg~-- 294 (314)
T TIGR00443 225 ETAEAALDELEAVLELLEARGVEEYISLDLGLVRGYHYYTGLIFEGYAPGLGA--------PIAGGGRYDNLLGRFGR-- 294 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccCCCCccceEEEEEECCCCC--------cccCCccHHHHHHHcCC--
Confidence 6666777777 77888887789999999999999999999999976443 69999999999998853
Q ss_pred cccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1052 YVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1052 ~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
++||||||+++|||+.++.
T Consensus 295 ---------~~~AvGfa~~~d~l~~~l~ 313 (314)
T TIGR00443 295 ---------PLPATGFALNLERLLEALT 313 (314)
T ss_pred ---------CCCCceEEecHHHHHHHhc
Confidence 4699999999999987753
No 13
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=7.9e-52 Score=480.50 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=252.8
Q ss_pred HhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhC-CCCcee
Q 000993 753 ELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-QKSSFK 826 (1196)
Q Consensus 753 ~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~-~~~P~r 826 (1196)
...+++++.++++|++|||++|.||+| .+..+ +++..++||+|.|++|+.++||||+|+||||+++++ ...|.|
T Consensus 5 ~~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R 84 (373)
T PRK12295 5 SASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPAR 84 (373)
T ss_pred hhHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeE
Confidence 456799999999999999999999999 33334 677788999999999999999999999999988774 466999
Q ss_pred EEEecCeeecCCCCCCCcceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHH
Q 000993 827 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 905 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~ 905 (1196)
+||+|+|||++ .++.+||+|+|+|+||.. ++.+|+|||.+++++|+.+|+.+ ++|+|||+++++++++.+++++++
T Consensus 85 ~~Y~g~VfR~~--~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~-~~i~ig~~~il~~ll~~l~l~~~~ 161 (373)
T PRK12295 85 YAYLGEVFRQR--RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGD-LEVRLGDVGLFAALVDALGLPPGW 161 (373)
T ss_pred EEEEccEEECC--CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHcCCCHHH
Confidence 99999999998 556778999999999975 57999999999999999999985 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----Cc-------------------------------------ccccccHHHHHHHHHHhc---
Q 000993 906 REKVAELLAMMGSLRP----QS-------------------------------------SEWKSKWVVIRRQLLQEL--- 941 (1196)
Q Consensus 906 ~~~l~~~l~~~d~~~~----~~-------------------------------------~~~k~~~~~~~~~~~~~~--- 941 (1196)
+++++++|+++++.+. .. ...+....++.+.+....
T Consensus 162 ~~~l~~~i~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~r~~~ei~~~l~~~~~~~ 241 (373)
T PRK12295 162 KRRLLRHFGRPRSLDALLARLAGPRVDPLDEHAGVLAALADEAAARALVEDLMSIAGISPVGGRSPAEIARRLLEKAALA 241 (373)
T ss_pred HHHHHHHHhccchHHHHHHhhcccccccccchhhhhhhhccchhhhhhhhhhhhhccccccccccHHHHHHHHHhhhccc
Confidence 9999999999886310 00 000112223333333221
Q ss_pred ---CCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh-HHHHHHHHH-----HHHHcCCC-ceEEEcCCCCCCCCCcc
Q 000993 942 ---NLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK-PTRKALDEL-----YLRIWRIE-KNIYIDALMPPIESYHR 1011 (1196)
Q Consensus 942 ---~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~-~~~~~l~~L-----~l~~~g~~-~~i~~Dl~lvrgl~YYT 1011 (1196)
+++.+.++.+..++ .+.|++++++++++.+...++ .+.+++++| .++.+|+. +++.||++++||++|||
T Consensus 242 ~~~~~~~~~~~~l~~l~-~~~g~~~~~~~~l~~l~~~~~~~~~~al~~L~~l~~~l~~~g~~~~~v~~D~~~vrgl~YYT 320 (373)
T PRK12295 242 AAARLPAEALAVLERFL-AISGPPDAALAALRALAADAGLDLDAALDRFEARLAALAARGIDLERLRFSASFGRPLDYYT 320 (373)
T ss_pred ccCCCCHHHHHHHHHHH-HccCCHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHcCCCcceEEEecccccCCcccc
Confidence 78888999999998 688988889999998766556 677787777 77888886 67999999999999999
Q ss_pred ceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhh
Q 000993 1012 NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1077 (1196)
Q Consensus 1012 G~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~ 1077 (1196)
|+|||+|..+.+ ..+||+|||||+|++.||+ +.++||||||+++|||+.+
T Consensus 321 GiVFe~~~~~~~-------~~~I~~GGRYD~Li~~fg~---------~~~~pAvGfai~~drl~~~ 370 (373)
T PRK12295 321 GFVFEIRAAGNG-------DPPLAGGGRYDGLLTRLGA---------GEPIPAVGFSIWLDRLAAL 370 (373)
T ss_pred ceEEEEEECCCC-------CCcccCCcCHHHHHHHhCC---------CCCCCeeEEEEcHHHHHhh
Confidence 999999987542 1379999999999999863 1357999999999999754
No 14
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A ....
Probab=100.00 E-value=1.4e-50 Score=465.26 Aligned_cols=297 Identities=24% Similarity=0.381 Sum_probs=244.5
Q ss_pred cccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEEEeecCCceEeecCCCcHHHHHHHH
Q 000993 743 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAI 818 (1196)
Q Consensus 743 G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a 818 (1196)
|++|++|.+++.++++++.++++|++|||++|.||+|+.. .......+++|+|.|++|+.++||||+|+|+||+++
T Consensus 1 G~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a 80 (311)
T PF13393_consen 1 GFRDLLPEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVA 80 (311)
T ss_dssp T---B-HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHH
Confidence 8999999999999999999999999999999999999332 223333559999999999999999999999999999
Q ss_pred hCC--CCceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHH-HcCCCCceEEEeCcHHHHHH
Q 000993 819 SNQ--KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVT-RFFHAESCDIHLNHGDLLEA 894 (1196)
Q Consensus 819 ~~~--~~P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~-~lgi~~~~~i~Lg~~~i~~~ 894 (1196)
++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|+|.++.++|+ .+|+++ +.|+|||++++++
T Consensus 81 ~~~~~~~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~~~~~daEvi~l~~e~l~~~l~~~~-~~i~i~h~~i~~~ 159 (311)
T PF13393_consen 81 RNLNLPRPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSSSLEADAEVIKLADEILDRELGLEN-FTIRINHTGILDA 159 (311)
T ss_dssp HCCGSSSSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-EEEEEEEHHHHHH
T ss_pred HhcCcCCCceEEEEcceeeccccCCCCCceeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCC-cEEEEcCchhhHH
Confidence 974 679999999999999877654 45699999999999999999999999999997 999975 9999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000993 895 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 974 (1196)
Q Consensus 895 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 974 (1196)
+++.+|++++.++.+..++.+++. .++ ++++.+.+++.+.++.+..++ .+.|+.+.+.+.+.. +.
T Consensus 160 il~~~gl~~~~~~~l~~~l~~~~~------------~~~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~l~~~~~~-~~ 224 (311)
T PF13393_consen 160 ILEHLGLPEDLRRELLEALDKKDL------------SEL-KELLSELGLSSESLEILDKLP-ELEGDPEALEELLES-LP 224 (311)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTHH------------HHH-HHHHHHTTTTHHHHHHHHHHH-HHHHSHHHHHHHHHH-HT
T ss_pred HHhhcCCChhhhhhhhhheecccc------------ccc-hhhhcccccchhhhhhhhccc-cccchHHHHHHHHHH-Hh
Confidence 999999999999999999988762 233 466667889999999999988 567775555554444 44
Q ss_pred CChHHHHHHHHH-----HHHHcC-CCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcc
Q 000993 975 ADKPTRKALDEL-----YLRIWR-IEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048 (1196)
Q Consensus 975 ~~~~~~~~l~~L-----~l~~~g-~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1048 (1196)
.++.+.+++++| +++.+| ...+|.||++++|+++||||+|||+|..+.+. .||+|||||+|+++||
T Consensus 225 ~~~~~~~~~~~L~~l~~~l~~~~~~~~~i~~D~~~~r~~~YYtG~vFe~~~~~~~~--------~ia~GGRYD~L~~~fg 296 (311)
T PF13393_consen 225 SSPALQEALEELEELLKLLEALGYPSIKIIFDLSLVRGLDYYTGIVFEVYAPGRGS--------PIAGGGRYDNLLEQFG 296 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTHTTTTEEEETT-GTSSTTEESEEEEEEETTSSS--------ESEEEEEETTHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccCceEEEChhhccchhhcCCEEEEEEEcCCCc--------eEecccChhHHHHHhC
Confidence 445455555555 778888 56799999999999999999999999986554 7999999999999985
Q ss_pred ccccccccCCCCCCCcceecccHHHH
Q 000993 1049 DREYVGYASRTNPPSGVGASLALETI 1074 (1196)
Q Consensus 1049 ~~~~~~~~g~~~~~pAvGfaiglerl 1074 (1196)
. ++||||||+++|||
T Consensus 297 ~-----------~~~AvGfai~ld~L 311 (311)
T PF13393_consen 297 K-----------PIPAVGFAIGLDRL 311 (311)
T ss_dssp S-----------S-EEEEEEEEHHHH
T ss_pred C-----------CCceEEEEEEeccC
Confidence 3 46999999999997
No 15
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.5e-48 Score=437.45 Aligned_cols=269 Identities=18% Similarity=0.226 Sum_probs=218.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 817 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~ 817 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+|++... .....++||+|.|++|+.++||||+|+||||++
T Consensus 6 ~~p~G~rD~lp~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~~iaR~~ 85 (281)
T PRK12293 6 EIPQGSKLYFGKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTLDVVRIV 85 (281)
T ss_pred CCCCcccccCcHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCHHHHHHH
Confidence 5699999999999999999999999999999999999999965554 445678999999999999999999999999999
Q ss_pred HhCC---CCceeEEEecCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHH
Q 000993 818 ISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEA 894 (1196)
Q Consensus 818 a~~~---~~P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~ 894 (1196)
+++. ..|+|+||+|+|||+++ +||+|+|+|+||.+++ +|||.+|.++|+++|++ +.|+|||++++++
T Consensus 86 a~~~~~~~~p~r~~Y~g~vfR~~~-----rEf~Q~GvEliG~~~~---~Evi~la~~~l~~lgl~--~~i~ig~~~i~~~ 155 (281)
T PRK12293 86 TKRLGRSTEHKKWFYIQPVFRYPS-----NEIYQIGAELIGEEDL---SEILNIAAEIFEELELE--PILQISNIKIPKL 155 (281)
T ss_pred HHhcccCCCceeEEEeccEEecCC-----CcccccCeEeeCCCCH---HHHHHHHHHHHHHcCCC--CEEEECCHHHHHH
Confidence 8753 45999999999999863 7999999999999986 69999999999999995 5799999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000993 895 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 974 (1196)
Q Consensus 895 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 974 (1196)
+++.++++++..+.. .++ +++. +.++.+..++ .+.|. + .++++...
T Consensus 156 ~l~~~~~~~~~~~~~--~~~---------------------~~~~------~~~~~l~~l~-~~~~~-~-~~~~~~~~-- 201 (281)
T PRK12293 156 VAEILGLDIEVFKKG--QIE---------------------KLLA------QNVPWLNKLV-RIKTL-E-DLDEVIEL-- 201 (281)
T ss_pred HHHHcCCCHHHHhHH--HHH---------------------HHHH------HhHHHHHHHH-hcCCH-H-HHHHHHhh--
Confidence 999999987654221 011 1111 1233444454 23332 2 23344332
Q ss_pred CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcccccc
Q 000993 975 ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1052 (1196)
Q Consensus 975 ~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~ 1052 (1196)
.+....+++++| .++.+++. .+.||++++||++||||+|||+|.++. +||+|||||+.
T Consensus 202 ~~~~~~~~l~~l~~~l~~l~~~-~~~~Dl~~vrgl~YYTGivFe~~~~~~----------~i~~GGRYD~~--------- 261 (281)
T PRK12293 202 VPDEIKEELEKLKELAESIKYE-NLVIAPLYYAKMRYYDDLFFRFFDGNS----------TLASGGNYEID--------- 261 (281)
T ss_pred CCHHHHHHHHHHHHHHHHcCCC-cEEEccccccCCCCccceEEEEEECCc----------eeccccCCCCC---------
Confidence 235778888888 77777764 499999999999999999999998631 59999999931
Q ss_pred ccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1053 VGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1053 ~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
+.||||||+|+|||+.+|.
T Consensus 262 --------~~PAvGfa~~ld~l~~~l~ 280 (281)
T PRK12293 262 --------GISSSGFALYTDNLIEILL 280 (281)
T ss_pred --------CCCcceEEeeHHHHHHHhh
Confidence 3699999999999988753
No 16
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-47 Score=434.43 Aligned_cols=368 Identities=19% Similarity=0.196 Sum_probs=289.9
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee----cCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|.|++|.+|.+++.++.|++++++.|.+|||+.|+||++.+ ... ++..+++||+|+|+.|+.++||||||+||
T Consensus 4 ~lp~g~rd~Lp~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRpD~T~pV 83 (390)
T COG3705 4 QLPEGIRDVLPLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPV 83 (390)
T ss_pred cCCCcchhcchhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecccccHHH
Confidence 5789999999999999999999999999999999999999922 223 67779999999999999999999999999
Q ss_pred HHHHHhCCC-CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHH
Q 000993 814 IRWAISNQK-SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 891 (1196)
Q Consensus 814 aR~~a~~~~-~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i 891 (1196)
+|.+++... .|.|+||.|+|||..+...+++ ||+|+|+|+||.++..||+|||.+++.+|+++|+.+ ++|.|||.+|
T Consensus 84 aR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~~~~ADaEvi~la~~~L~~~gl~~-~~l~LG~~gi 162 (390)
T COG3705 84 ARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKALGLAD-LKLELGHAGI 162 (390)
T ss_pred HHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCCcchhhHHHHHHHHHHHHHcCCcC-eEEEeccHHH
Confidence 999988654 5999999999999865555555 999999999999999999999999999999999986 9999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 000993 892 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 971 (1196)
Q Consensus 892 ~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 971 (1196)
+++++..+++++.++++++++|.+++... + .++....+++++....+..++. +.|. .+++.+++.
T Consensus 163 f~all~~~~l~~~~~~~L~~a~~~k~~~~------------~-~~~~~~~~~~~~~~~~l~~l~~-l~gg-~e~l~~~~~ 227 (390)
T COG3705 163 FRALLAAAGLPGGWRARLRRAFGDKDLLG------------L-ELLVLAAPLSPELRGRLSELLA-LLGG-REVLERARG 227 (390)
T ss_pred HHHHHHHcCCChhHHHHHHHHHhccchhh------------H-HHHhhccCCChhhhHHHHHHHH-HhCC-HHHHHHHHH
Confidence 99999999999999999999999998432 1 3444446777888888888884 5555 466677776
Q ss_pred cCCCChHHHHHHHHH---HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcc
Q 000993 972 ALPADKPTRKALDEL---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048 (1196)
Q Consensus 972 ~~~~~~~~~~~l~~L---~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1048 (1196)
.+........+++++ .....+...++.+|++++++++||||++|++|..+.+. ++++|||||+|.+.||
T Consensus 228 ~l~~~~~~~~al~~~~~l~di~~~~~e~i~lDLg~l~~~~YyTg~~F~ay~~~~~~--------al~~GGRYd~l~~~f~ 299 (390)
T COG3705 228 LLDELMAQGIALNEGRALADIARRLIEKIALDLGRLRHFDYYTGLVFLAYADGLGD--------ALASGGRYDGLLGLFG 299 (390)
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhccchhheehhhcccccchhhceeeeeeeccccc--------hhhcccchhhhhhhcC
Confidence 554333323444444 11122233569999999999999999999999887765 7999999999988886
Q ss_pred ccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCC
Q 000993 1049 DREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1128 (1196)
Q Consensus 1049 ~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~ 1128 (1196)
.. .||+||++++++|... ..+ ......++.+.... +.....++++++++|..|-.+.....
T Consensus 300 ~~-----------~patGf~~~l~~l~~~----~~~-~~~~~~~~~f~~~~-~~~~~~~~e~~~~~r~~g~~~~~~l~-- 360 (390)
T COG3705 300 RA-----------APATGFALRLDALAQG----GLP-LEERRYAALFGREL-DYYTGAAFEAAQALRLAGGGRYDRLL-- 360 (390)
T ss_pred cc-----------ccchhhHhhHHHHHhc----CCC-cccchhhhccCccc-hhhHHHHHHHHHHhcccCCeEEEecc--
Confidence 53 3999999999999862 111 12334455554442 33457899999999977655542222
Q ss_pred CCHHHHHHHHHHCCCcEEEEEcCC
Q 000993 1129 PSLTEQYEYASEHDIKCLVILTDT 1152 (1196)
Q Consensus 1129 ~~l~k~~~~A~~~g~~~~iiig~~ 1152 (1196)
...-..+...++.+.+.+...
T Consensus 361 ---~g~~~~~~~~~~~~~~~~~~~ 381 (390)
T COG3705 361 ---TGLGASEEIPGVGFSLWLDRG 381 (390)
T ss_pred ---cccchHhhhcccceeEeeccc
Confidence 112234445677777776554
No 17
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-47 Score=423.04 Aligned_cols=261 Identities=28% Similarity=0.399 Sum_probs=219.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+.+.|.+.+.||+|+||.|.+|..+.||+.||||+++...... .....+.+|+++|++|+|||||++++.|.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~--- 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE--- 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee---
Confidence 4477889999999999999999999999999999998654221 12334679999999999999999998873
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+.||||||+. |.|.+.+...+.+.+.....+++|++.|+
T Consensus 247 -------------------------------------~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av 289 (475)
T KOG0615|consen 247 -------------------------------------VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV 289 (475)
T ss_pred -------------------------------------cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence 2456799999996 69999999999999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.|||++||+||||||+|||+..+ ..+||+|||+|+...... .+.+.||||.|.|||++.+.
T Consensus 290 kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------fm~TlCGTpsYvAPEVl~~k 353 (475)
T KOG0615|consen 290 KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------FMKTLCGTPSYVAPEVLASK 353 (475)
T ss_pred HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------ehhhhcCCccccChhheecC
Confidence 99999999999999999999876 779999999999764221 24678999999999999874
Q ss_pred C--CCCCcchhHHHHHHHHHhhc---CCchhHHHH-HHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 610 P--KIDEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 610 ~--~~s~ksDVwSlGviLyELlt---Pf~~~~~~~-~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+ .+..++||||+||+||-+++ ||....... ...++...... .|+.|..++.+..+||.+||..||++|||+++
T Consensus 354 g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 354 GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred CeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3 24568999999999999997 787665544 33333333333 46789999999999999999999999999999
Q ss_pred HHhccCCCCchHH
Q 000993 683 LLQDALPPQMEYE 695 (1196)
Q Consensus 683 iL~~~~~~~~~~~ 695 (1196)
+|+|||++-....
T Consensus 434 aL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 434 ALNHPWFKDAPCL 446 (475)
T ss_pred HhcChhhhccccc
Confidence 9999999866533
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=415.21 Aligned_cols=263 Identities=30% Similarity=0.450 Sum_probs=229.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|+++++||+|+||+|+.++.+.+++.||+|+++++.... ........|..+|..++||+||+++..|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF------- 94 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF------- 94 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-------
Confidence 33589999999999999999999999999999999998765432 3567889999999999999999999777
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
++...+|+|+||++ |.|..+|++.+.|++..++.|+.+|+.||.||
T Consensus 95 ---------------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~L 141 (357)
T KOG0598|consen 95 ---------------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYL 141 (357)
T ss_pred ---------------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHH
Confidence 45788999999996 59999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|||||||||+|||||.+||++|+|||+|+.....+ ....+.|||+.|||||++.+ ..|+.+
T Consensus 142 H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------~~t~tfcGT~eYmAPEil~~-~gy~~~ 205 (357)
T KOG0598|consen 142 HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------DATRTFCGTPEYMAPEILLG-KGYDKA 205 (357)
T ss_pred HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC---------------CccccccCCccccChHHHhc-CCCCcc
Confidence 99999999999999999999999999999998532111 12345799999999999998 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC----CHHHHHhccC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDAL 688 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----ta~eiL~~~~ 688 (1196)
+|||||||++|||++ ||...+......+++..+...++. ..+++++++++++|+.||.+|. .+.+|-+|+|
T Consensus 206 vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 206 VDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred cchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 999999999999996 898888777777777655344433 2456999999999999999995 6999999999
Q ss_pred CCCchHHHHH
Q 000993 689 PPQMEYELLD 698 (1196)
Q Consensus 689 ~~~~~~~~~~ 698 (1196)
|..+.|+.+.
T Consensus 284 F~~inW~~l~ 293 (357)
T KOG0598|consen 284 FKGINWEKLL 293 (357)
T ss_pred cccCCHHHHH
Confidence 9999998663
No 19
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-46 Score=431.84 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=224.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|+..+.||+|||+.||.+++..+|+.||+|++..+. ......+.+.+|+++.++|+|||||+++++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F---------- 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF---------- 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe----------
Confidence 67999999999999999999999999999999998654 2344567899999999999999999999998
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|||+|+|. ++|..++.+++.++|.+++.|++||+.||.|||++
T Consensus 88 ------------------------------EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~ 137 (592)
T KOG0575|consen 88 ------------------------------EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL 137 (592)
T ss_pred ------------------------------ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 45788999999997 69999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+|+|||||..|+|++++.+|||+|||+|+.+..+. -...+.||||.|.|||++.. ..++..+||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---------------Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi 201 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---------------ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI 201 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcc---------------cccceecCCCcccChhHhcc-CCCCCchhh
Confidence 99999999999999999999999999999876432 12457899999999999997 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||+|||||.|+. ||....-.+...++......+|. ..+.++++||.+||++||.+|||+++||.|+||.+
T Consensus 202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 999999999996 88887777777776665555665 55679999999999999999999999999999943
No 20
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=412.69 Aligned_cols=258 Identities=29% Similarity=0.465 Sum_probs=219.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+..+.+++.++.||+|..|+||+|+|+.|++.+|+|+|.. .......+++.+|+++++.++|||||.+||+|+..+
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~--- 150 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG--- 150 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---
Confidence 4556789999999999999999999999999999999953 345567889999999999999999999999996531
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
. .++|+||||+ |+|.+++...+++++....+++.+|++||.||
T Consensus 151 -----------------------------------~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YL 194 (364)
T KOG0581|consen 151 -----------------------------------E-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYL 194 (364)
T ss_pred -----------------------------------c-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 5799999997 69999999999999999999999999999999
Q ss_pred Hh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|. ++||||||||+|||++..|.|||||||.++.+... ...+++||..|||||.+++ ..|+.
T Consensus 195 h~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----------------~a~tfvGT~~YMsPERi~g-~~Ys~ 256 (364)
T KOG0581|consen 195 HEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----------------IANTFVGTSAYMSPERISG-ESYSV 256 (364)
T ss_pred hhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----------------hcccccccccccChhhhcC-CcCCc
Confidence 95 99999999999999999999999999999976432 2356899999999999999 68999
Q ss_pred cchhHHHHHHHHHhhc---CCchh-----HHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTA-----MERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~-----~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++||||||++++||++ ||.+. ...+....+.. ...|..+. ..++++++||..||++||.+|||+.|+++
T Consensus 257 ~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 257 KSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9999999999999996 66653 22233333322 22232333 37889999999999999999999999999
Q ss_pred ccCCCCchH
Q 000993 686 DALPPQMEY 694 (1196)
Q Consensus 686 ~~~~~~~~~ 694 (1196)
|||+.+...
T Consensus 335 Hpfi~~~~~ 343 (364)
T KOG0581|consen 335 HPFIKKFED 343 (364)
T ss_pred CHHHhhccc
Confidence 999887654
No 21
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.
Probab=100.00 E-value=1.9e-45 Score=411.64 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=208.2
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCC---
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQK--- 822 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~--- 822 (1196)
++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|++|+.++||||+|+|+||+++++..
T Consensus 1 ~~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~ 80 (261)
T cd00773 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLP 80 (261)
T ss_pred ChHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCC
Confidence 46789999999999999999999999999 33333 56778999999999999999999999999999998654
Q ss_pred CceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCC
Q 000993 823 SSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGI 901 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl 901 (1196)
.|+|+||+|+|||++.++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.|+|||+++++++++.+++
T Consensus 81 ~p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~~~~~daE~i~l~~~~l~~lg~~~-~~i~l~~~~i~~~l~~~~~~ 159 (261)
T cd00773 81 LPLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSDSPLADAEVIALAVEILEALGLKD-FQIKINHRGILDGIAGLLED 159 (261)
T ss_pred CCeEEEEEcCEEecCCCCCCCccceEEeceeeeCCCChHHHHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHhhccCC
Confidence 6999999999999987764 555799999999999999999999999999999999985 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHH
Q 000993 902 KAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 981 (1196)
Q Consensus 902 ~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~ 981 (1196)
+++.+.++.+.+++ ...+
T Consensus 160 ~~~~~~~l~~~l~~--------------------------------------------------------------~~l~ 177 (261)
T cd00773 160 REEYIERLIDKLDK--------------------------------------------------------------EALA 177 (261)
T ss_pred CHHHHHHHHHHhhH--------------------------------------------------------------HHHH
Confidence 87655444322221 0111
Q ss_pred HHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCC
Q 000993 982 ALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1059 (1196)
Q Consensus 982 ~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~ 1059 (1196)
.|+++ .++.+|+..+|.||++++|+++||||+||++|..+.+ ...+||+|||||+|+++|++.
T Consensus 178 ~l~~l~~~l~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~------~~~~i~~GGRYD~L~~~f~~~--------- 242 (261)
T cd00773 178 HLEKLLDYLEALGVDIKYSIDLSLVRGLDYYTGIVFEAVADGLG------AQGSIAGGGRYDGLLEEFGGE--------- 242 (261)
T ss_pred HHHHHHHHHHHcCCCceEEEcCccccCCcccCceEEEEEECCCC------ccCeEeeccCHHHHHHHhCCC---------
Confidence 12222 4566777678999999999999999999999998751 123799999999999987432
Q ss_pred CCCCcceecccHHHHHhhc
Q 000993 1060 NPPSGVGASLALETIIQHY 1078 (1196)
Q Consensus 1060 ~~~pAvGfaiglerl~~~L 1078 (1196)
++||||||+++|||+.+|
T Consensus 243 -~~~avGfa~~~d~l~~~~ 260 (261)
T cd00773 243 -DVPAVGFAIGLERLLLAL 260 (261)
T ss_pred -CCCeEEEEEcHHHHHHhh
Confidence 469999999999998775
No 22
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-45 Score=405.55 Aligned_cols=259 Identities=27% Similarity=0.481 Sum_probs=223.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+...+|.+.+.||+|+||+||+|+++.++..||||.|.++.......+.+..|+++|+.++|||||++++|+.
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~------- 79 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE------- 79 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-------
Confidence 3468999999999999999999999999999999999877666677788999999999999999999999873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...++|+|||||. |+|.++++..+.+++..++.++.||+.||++||
T Consensus 80 ---------------------------------~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 80 ---------------------------------DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred ---------------------------------cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999997 699999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCC------CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDAR------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+++||||||||+||||+.. -.+||+|||+|+.+.... ...+.||+|.|||||+++. .
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----------------~a~tlcGSplYMAPEV~~~-~ 189 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----------------MAETLCGSPLYMAPEVIMS-Q 189 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----------------HHHHhhCCccccCHHHHHh-c
Confidence 9999999999999999875 458999999999875332 1245799999999999987 6
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
+|+.|+|+||+|+|||+|++ ||......+............|......++...+|+...++.+|.+|.++.+-+.|+
T Consensus 190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 89999999999999999996 888777777766554444444444444556777999999999999999999999988
Q ss_pred CCCCch
Q 000993 688 LPPQME 693 (1196)
Q Consensus 688 ~~~~~~ 693 (1196)
+.....
T Consensus 270 ~l~~~p 275 (429)
T KOG0595|consen 270 FLAANP 275 (429)
T ss_pred hcccCc
Confidence 765543
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=390.06 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=231.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|+.++.||.|+||.|.+++++.+|..||+|++++... .....+...+|-.+|+.+.||+++++++.|.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~------- 114 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK------- 114 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------
Confidence 46899999999999999999999999999999999976542 3445677889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+..++|+||||++ |.|..++++.++|+++.++.++.||+.||+|||
T Consensus 115 ---------------------------------d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 115 ---------------------------------DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred ---------------------------------cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 4678999999997 589999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|++|||||+|||||.+|++||+|||+|+.+... +-+.||||.|+|||+++. ..|+.++
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------T~TlCGTPeYLAPEii~s-k~ynkav 222 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------TWTLCGTPEYLAPEIIQS-KGYNKAV 222 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------EEEecCCccccChHHhhc-CCCCcch
Confidence 999999999999999999999999999999976321 346799999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC-----CCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R-----Pta~eiL~~~~ 688 (1196)
|+|||||++|||+. ||....+..+..+++..+..+|+.+ ++++++||+.+|+.|-.+| +...+|..|+|
T Consensus 223 DWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 223 DWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred hHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 99999999999995 9999999999999998888888765 4599999999999999999 46789999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....|..+
T Consensus 300 F~~v~W~~i 308 (355)
T KOG0616|consen 300 FKGVDWEAI 308 (355)
T ss_pred cccccHHHH
Confidence 999988755
No 24
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-45 Score=414.09 Aligned_cols=275 Identities=30% Similarity=0.510 Sum_probs=238.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.+..+||.+.+.||.|+|++|++|+.+.+++.||||++.++... ......+.+|-.+|.+| .||.|+++|..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 34468999999999999999999999999999999998755422 12234677899999999 899999999887
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
++...+|+|+||++ |+|.++|++.+.|++..++.|+.||+.||+
T Consensus 144 -----------------------------------QD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 144 -----------------------------------QDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE 188 (604)
T ss_pred -----------------------------------ecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 34678999999996 799999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||||||||+|||+|.++++||+|||.|+.+......+... ........+..+++||..|.+||+|.. ...+
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~--~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~ 265 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENP--VDPNQASSRRSSFVGTAEYVSPELLND-SPAG 265 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCc--cCcccccCcccceeeeecccCHHHhcC-CCCC
Confidence 9999999999999999999999999999999999887654332211 111112223467999999999999998 6789
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+.+|+|+||||||+|+. ||.+..+.-++.+++.....+|+.++ +.+++||+++|..||.+|+|+.+|.+|+||.
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 99999999999999996 99999999999999888888888765 5899999999999999999999999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
.+.|+.+
T Consensus 343 ~Vdw~nl 349 (604)
T KOG0592|consen 343 GVDWENL 349 (604)
T ss_pred cCChhhh
Confidence 9998863
No 25
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-46 Score=394.71 Aligned_cols=249 Identities=30% Similarity=0.558 Sum_probs=211.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeee-eeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ-AWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~-~~~e~~~~~~~ 458 (1196)
+.+|.++++||+|+||+||++++..+|..+|.|.+.....+....+....|+.+|++|+|||||++++ .|.+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~------- 90 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE------- 90 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc-------
Confidence 57899999999999999999999999999999999877677777889999999999999999999986 3321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...++||||||+ |+|.++++. ...+++..+|+++.|+++||.
T Consensus 91 --------------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 91 --------------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred --------------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 2345899999996 799998863 346999999999999999999
Q ss_pred HHHh--CC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHG--QG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs--~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
++|+ .. |+||||||.||+|+.+|.+||+|||+++.+.... ....+.+|||.||+||++.+
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~---------------tfA~S~VGTPyYMSPE~i~~- 202 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT---------------TFAHSLVGTPYYMSPERIHE- 202 (375)
T ss_pred HHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh---------------HHHHhhcCCCcccCHHHHhc-
Confidence 9999 44 9999999999999999999999999999875432 12356899999999999998
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+.++||||+||++|||+. ||.+..-.+...+ ...+..||.+ ...+.++..||..|+.+||..||+.-.+++
T Consensus 203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~K--I~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKK--IEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHH--HHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 679999999999999999983 9988744333332 2356777666 456678999999999999999999655544
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-44 Score=411.40 Aligned_cols=278 Identities=28% Similarity=0.485 Sum_probs=229.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|+++++||+|+||.||+|+.+.||..||+|++++... .......+..|-.+|...++|+||++|.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 36899999999999999999999999999999999986552 333456788899999999999999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
++..++|+||||++ |++..+|...+.+++..++.|+.+++.|+..||
T Consensus 211 --------------------------------QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 211 --------------------------------QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred --------------------------------cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH
Confidence 45789999999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc----------------CCCCCCC-CCCcc-----------
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ----------------DAAFPTD-TGGVS----------- 588 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~----------------~~~~~~~-~~~~~----------- 588 (1196)
++|+|||||||+|+|||..||+||+|||+|+-+....... ...++.. +....
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 9999999999999999999999999999997543211100 0111100 00000
Q ss_pred ----ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCC
Q 000993 589 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKF 659 (1196)
Q Consensus 589 ----~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~ 659 (1196)
.-..+.+|||.|||||++.+ ..|+..+|+||||||+||||. ||....+.+...+++.-. ..+|.. ...+
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s 416 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLS 416 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-Cccc
Confidence 01135799999999999999 459999999999999999995 999988888877665533 334433 3456
Q ss_pred HHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCchHHHHHH
Q 000993 660 SEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYELLDN 699 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~ 699 (1196)
+++++||.+||+ ||++|. +++||.+||||..+.|+.+..
T Consensus 417 ~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 417 DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence 899999999999 999998 499999999999999986654
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-44 Score=404.12 Aligned_cols=260 Identities=31% Similarity=0.471 Sum_probs=214.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~ 455 (1196)
..++++|.++++||.|+||.||+|+.+.+|..||||.++.+..+.+.. .-+||++.|++|+ |||||++++++.++
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~--- 81 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDN--- 81 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhcc---
Confidence 456789999999999999999999999999999999998776664433 3468999999998 99999999888553
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||...|++++..+ ..|+++.++.|+.||++||+|
T Consensus 82 ------------------------------------~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~h 125 (538)
T KOG0661|consen 82 ------------------------------------DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAH 125 (538)
T ss_pred ------------------------------------CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHH
Confidence 2389999999999999999765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+|.+|+.||||||+|||+.....+||+|||+||.+... ...|.++.|.+|.|||+|.....|+.
T Consensus 126 iHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk----------------pPYTeYVSTRWYRAPEvLLrs~~Ys~ 189 (538)
T KOG0661|consen 126 IHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK----------------PPYTEYVSTRWYRAPEVLLRSGYYSS 189 (538)
T ss_pred HHhcCcccccCChhheEecccceeEecccccccccccC----------------CCcchhhhcccccchHHhhhccccCC
Confidence 99999999999999999999999999999999975421 12366799999999999988788999
Q ss_pred cchhHHHHHHHHHhhc--C-CchhHHHHHHHHHh--h-----------------hcCCCCC--------ccccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDL--K-----------------QKGELPP--------SWVAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l--~-----------------~~~~~p~--------~~~~~~~~l~~ 664 (1196)
+.||||+|||++|+++ | |.+..+.....++- . .+..+|. -.+..++++.+
T Consensus 190 pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~ 269 (538)
T KOG0661|consen 190 PVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAAS 269 (538)
T ss_pred chHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHH
Confidence 9999999999999975 4 33333333222111 0 0112221 12335678899
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||.+||+.||.+||||.++|+||||+.-
T Consensus 270 li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 270 LIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred HHHHHhcCCCccCccHHHHhcCcccccc
Confidence 9999999999999999999999999864
No 28
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.7e-44 Score=379.63 Aligned_cols=257 Identities=28% Similarity=0.465 Sum_probs=212.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++.|+.+.++|+|+||.||+|+++.||+.||||++.-+..+....+-.+||+++|++|+|||+|.++++|-
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--------- 71 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--------- 71 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH---------
Confidence 36789999999999999999999999999999999866666667778899999999999999999998882
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+++|+|||+.++.+.+... ..++.+.+.++++|++.|+.|+|++
T Consensus 72 -------------------------------rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 72 -------------------------------RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred -------------------------------hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 35678999999999888888765 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||||+||||+.+|.+||||||+|+.+..+. -..+.++.|.+|.|||.+.|...|+..+||
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---------------d~YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---------------DNYTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCc---------------chhhhhhhhhhccChhhhcccCcCCCcccc
Confidence 99999999999999999999999999999875322 113567899999999999998889999999
Q ss_pred HHHHHHHHHhhc--CCchhH-HHHHHHHHhhhcCC-------------------CCC---------ccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH--PFSTAM-ERQIVLSDLKQKGE-------------------LPP---------SWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt--Pf~~~~-~~~~~~~~l~~~~~-------------------~p~---------~~~~~~~~l~~LI~ 667 (1196)
||+||++.||++ |..+.. +-.....+...-+. +|. ..+..+.-+.+|++
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999997 544332 22222211111111 110 11223334679999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCC
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.||..||++|++-+++|.|++|.+
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHH
Confidence 999999999999999999999944
No 29
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-43 Score=409.32 Aligned_cols=288 Identities=26% Similarity=0.366 Sum_probs=238.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
...+++|.++++||+|+||+|+++..+.+++.||||++++... .....+..+.|..++... +||.++.++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4568999999999999999999999999999999999987653 344567788899988888 599999999887
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...++|+||||+.|+-..+++..+.|++..++.|+..|+.||.|
T Consensus 439 -----------------------------------QT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~f 483 (694)
T KOG0694|consen 439 -----------------------------------QTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQF 483 (694)
T ss_pred -----------------------------------ccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHH
Confidence 457899999999976334455566889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||||||||.+|||+|.+|++||+|||+++..-.. ...+++.||||.|||||++.+ ..|+.
T Consensus 484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~---------------g~~TsTfCGTpey~aPEil~e-~~Yt~ 547 (694)
T KOG0694|consen 484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ---------------GDRTSTFCGTPEFLAPEVLTE-QSYTR 547 (694)
T ss_pred HHhcCceeeecchhheEEcccCcEEecccccccccCCC---------------CCccccccCChhhcChhhhcc-Ccccc
Confidence 99999999999999999999999999999999853111 123567899999999999999 78999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
++|||||||+||||+. ||.+.++.++.-.++.....+|.. .+.++.++++++|..||.+|.. +++|.+|
T Consensus 548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 9999999999999995 999999999988888766665543 3459999999999999999985 6889999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCCcchhhhccccccchh
Q 000993 687 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEET 725 (1196)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~ 725 (1196)
|||..+.|+.+. .+.+.++-...+..+..-+-||++-
T Consensus 625 pFFr~i~w~~L~--~r~i~PPf~P~i~~~~D~snFd~eF 661 (694)
T KOG0694|consen 625 PFFRSIDWDDLL--NRRIKPPFVPTIKGPEDVSNFDEEF 661 (694)
T ss_pred CccccCCHHHHh--hccCCCCCCcccCChhhhcccchhh
Confidence 999999987553 3344444434444333334444443
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-43 Score=395.31 Aligned_cols=266 Identities=27% Similarity=0.437 Sum_probs=221.4
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
....+..+.|+.+++||+|.||.||+|++..+|+.||+|+++...........+.||+.+|++|+||||+++.+..++.
T Consensus 110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~- 188 (560)
T KOG0600|consen 110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK- 188 (560)
T ss_pred cccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec-
Confidence 3445667899999999999999999999999999999999988765556667789999999999999999999876542
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|+|||+.+|..++... -.|++.++..|+.||+.||
T Consensus 189 -------------------------------------~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl 231 (560)
T KOG0600|consen 189 -------------------------------------LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGL 231 (560)
T ss_pred -------------------------------------CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHH
Confidence 13568999999999999998764 4799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+|||||.+|||||.+|.+||+|||+|+++.... ....++.+-|.+|.|||.|.|...|
T Consensus 232 ~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------~~~~T~rVvTLWYRpPELLLG~t~Y 297 (560)
T KOG0600|consen 232 EYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------SAPYTSRVVTLWYRPPELLLGATSY 297 (560)
T ss_pred HHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--------------CcccccceEEeeccChHHhcCCccc
Confidence 99999999999999999999999999999999999865332 1235788999999999999998889
Q ss_pred CCcchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCCCCC-ccc-------------------------cCCHHHH
Q 000993 613 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGELPP-SWV-------------------------AKFSEQE 663 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~~p~-~~~-------------------------~~~~~l~ 663 (1196)
+.++|+||.||||.||+. | |.+..+.+....+....+...+ .|. ..++.+.
T Consensus 298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l 377 (560)
T KOG0600|consen 298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASAL 377 (560)
T ss_pred ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHH
Confidence 999999999999999996 4 4455554444443332222110 111 1234567
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|+..||+.||.+|.||.++|++.||..
T Consensus 378 ~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 378 DLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred HHHHHHhccCccccccHHHHhcCccccc
Confidence 8999999999999999999999999944
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-42 Score=383.95 Aligned_cols=264 Identities=26% Similarity=0.372 Sum_probs=223.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++..+||.|..++||+|++..++..||||++++..+... .+.+.+|+..|+.++||||++++.+|+.
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv------- 95 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV------- 95 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe-------
Confidence 45899999999999999999999999999999999998877654 6789999999999999999999998853
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||.||. |++.+++... ..++|..+..++++++.||.||
T Consensus 96 ---------------------------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL 142 (516)
T KOG0582|consen 96 ---------------------------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL 142 (516)
T ss_pred ---------------------------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH
Confidence 457899999996 7999999764 4599999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh-ccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~s~ 614 (1196)
|.+|.||||||+.||||+++|.|||+|||.+..+...... ...+....+|||+|||||+ .+....|+.
T Consensus 143 H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R-----------~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 143 HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR-----------QVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce-----------eeEeeccccCcccccChHHhhhcccCccc
Confidence 9999999999999999999999999999999876543200 0111167899999999999 444456999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
|+|||||||+..||.+ ||....+++..+..+......+. .....+..++.+|..||..||.+|||++++|
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 9999999999999996 99999998888877764433211 1112234678999999999999999999999
Q ss_pred hccCCCCchH
Q 000993 685 QDALPPQMEY 694 (1196)
Q Consensus 685 ~~~~~~~~~~ 694 (1196)
+|+||++...
T Consensus 292 kh~FFk~~k~ 301 (516)
T KOG0582|consen 292 KHAFFKKAKS 301 (516)
T ss_pred ccHHHhhccc
Confidence 9999998753
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-42 Score=398.68 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=219.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecC
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 453 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~ 453 (1196)
...+.|.+.+.||+|+||+|++|.+..+|..||||+++..... ......+.+|+.+++.++ ||||++++.++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3457899999999999999999999999999999987654211 234567779999999998 999999998872
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||. |+|.+.+...+++.+.++++++.||++|+
T Consensus 91 -------------------------------------t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 91 -------------------------------------TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred -------------------------------------cCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 2456999999997 59999999999999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhcc-ccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLK-LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+|||++||+||||||+|||++.+ +++||+|||+++... .. -...+.|||+.|+|||++.+..
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------GLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------CcccCCCCCcccCCHHHhCCCC
Confidence 99999999999999999999999 999999999998652 11 1235679999999999999965
Q ss_pred CC-CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KI-DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~-s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.| +.++||||+||+||.|++ ||...........+......+|.... ++++++|+++||..||.+|+|+.+|+.|
T Consensus 198 ~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 198 TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 25 589999999999999997 99886666666665555555555443 7899999999999999999999999999
Q ss_pred cCCCC
Q 000993 687 ALPPQ 691 (1196)
Q Consensus 687 ~~~~~ 691 (1196)
+||+.
T Consensus 276 ~w~~~ 280 (370)
T KOG0583|consen 276 PWFQK 280 (370)
T ss_pred hhhcc
Confidence 99997
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.5e-43 Score=395.74 Aligned_cols=253 Identities=27% Similarity=0.422 Sum_probs=222.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+........+.+.+|+++++.++|||||.+++.|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf---------- 70 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF---------- 70 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh----------
Confidence 4689999999999999999999999999999999987777777788899999999999999999999765
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
+...++|+|.|||.|+|..++...+.++++.++.++.|+++||.|||+++
T Consensus 71 ------------------------------Et~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r 120 (808)
T KOG0597|consen 71 ------------------------------ETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR 120 (808)
T ss_pred ------------------------------cccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 34678999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||+||.|||++..+++|+||||+|+....+. ...++..|||.|||||++.+ ..|+..+|+|
T Consensus 121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---------------~vltsikGtPlYmAPElv~e-~pyd~~sDlW 184 (808)
T KOG0597|consen 121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT---------------SVLTSIKGTPLYMAPELVEE-QPYDHTSDLW 184 (808)
T ss_pred cccccCCcceeeecCCCceeechhhhhhhcccCc---------------eeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence 9999999999999999999999999999754321 22356789999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|+|||+|||++ ||....-.+....+.......|+ ..++.+.+|++.+|.+||.+|.|+.+++.|+|.+.
T Consensus 185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc---cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 99999999996 88777666665555543333332 66789999999999999999999999999997654
No 34
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6e-42 Score=360.85 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=214.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|..+++||+|.||.||+|++..+|+.||||+|+..+..........||++.|+.++||||+.++++|.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--------- 72 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH--------- 72 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC---------
Confidence 46788899999999999999999999999999999887766677889999999999999999999998832
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+.||+||++.+|..+++.. ..++..++..|+.++++||+|||++.
T Consensus 73 -------------------------------~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~ 121 (318)
T KOG0659|consen 73 -------------------------------KSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW 121 (318)
T ss_pred -------------------------------CCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 4567899999999999999754 46999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||.|+||+++|.+||+|||+|+.+..+.. ..+..+-|.+|.|||.+-|...|+..+|||
T Consensus 122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~---------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmW 186 (318)
T KOG0659|consen 122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR---------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMW 186 (318)
T ss_pred hhcccCCccceEEcCCCcEEeecccchhccCCCCc---------------ccccceeeeeccChHHhccchhcCCcchhh
Confidence 99999999999999999999999999998754331 123348899999999999988999999999
Q ss_pred HHHHHHHHhhc--CCchhHHHHHHH-HHhhhcCC--------------------CCC-----ccccCCHHHHHHHHHccc
Q 000993 620 SLGIVFFELWH--PFSTAMERQIVL-SDLKQKGE--------------------LPP-----SWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 620 SlGviLyELlt--Pf~~~~~~~~~~-~~l~~~~~--------------------~p~-----~~~~~~~~l~~LI~~cL~ 671 (1196)
|.|||+.||+- ||.+....-..+ .+.+.-+. .|. .++..++++.+|+..||.
T Consensus 187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ 266 (318)
T KOG0659|consen 187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT 266 (318)
T ss_pred hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence 99999999984 776443322222 11111110 111 122344567899999999
Q ss_pred CCCCCCCCHHHHHhccCCCCch
Q 000993 672 PSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.||.+|+|+.|+|+|+||.+..
T Consensus 267 ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 267 YNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred cCchhcccHHHHhcchhhhcCC
Confidence 9999999999999999988653
No 35
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=392.03 Aligned_cols=249 Identities=33% Similarity=0.482 Sum_probs=210.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE-EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~-vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++...+.||.|+||+||+|.|+ |+. ||||++.....+......|.+|+.+|++++|||||+++|+|.+.
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------ 111 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------ 111 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC------
Confidence 345566677999999999999997 777 99999986655545577899999999999999999999998432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...++|||||++ |+|.++++. ...++...+..++.|||+||.||
T Consensus 112 ---------------------------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YL 158 (362)
T KOG0192|consen 112 ---------------------------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYL 158 (362)
T ss_pred ---------------------------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 115799999997 699999987 57899999999999999999999
Q ss_pred HhCC-CcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-CCCC
Q 000993 536 HGQG-IIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-WPKI 612 (1196)
Q Consensus 536 Hs~g-IiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~ 612 (1196)
|+++ ||||||||+|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|
T Consensus 159 H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------~~~~~~~GT~~wMAPEv~~~~~~~~ 223 (362)
T KOG0192|consen 159 HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------TSMTSVAGTYRWMAPEVLRGEKSPY 223 (362)
T ss_pred hcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---------------ccccCCCCCccccChhhhcCCCCcC
Confidence 9999 99999999999999997 99999999998653211 12344689999999999995 2579
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.|+|||||||+||||+| ||......+...... .....|+......+.+..||.+||..||.+||++.+|+.
T Consensus 224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999999997 999888844444433 355556555557889999999999999999999999985
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.7e-42 Score=368.80 Aligned_cols=268 Identities=27% Similarity=0.402 Sum_probs=218.0
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+...+.+++|+.+..|++|+||.||+|+++.|++.||+|+++........--.-+||+.+|.+++|||||.+-.+.+-.
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~- 147 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS- 147 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc-
Confidence 5567778999999999999999999999999999999999987654333334578999999999999999998775321
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
+-..+|||||||..+|..++.... +|...++..++.|+++|+
T Consensus 148 -------------------------------------~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~gl 190 (419)
T KOG0663|consen 148 -------------------------------------NMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGL 190 (419)
T ss_pred -------------------------------------ccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 235689999999999999998765 899999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++.|+||||||+|+|++..|.+||+|||+|+.+..+- -..+..+-|.+|.|||.|.|...|
T Consensus 191 k~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~---------------k~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 191 KHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL---------------KPYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc---------------ccCcceEEEeeecCHHHhcCCccc
Confidence 99999999999999999999999999999999999875432 124667899999999999998899
Q ss_pred CCcchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCC-------------------CCCc--------cc--cCCH
Q 000993 613 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGE-------------------LPPS--------WV--AKFS 660 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~-------------------~p~~--------~~--~~~~ 660 (1196)
+.+.||||+|||+.||++ | |.+..+.....++...-+. ++.. +. ..+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 999999999999999996 4 3344333333222221111 0100 00 0123
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
...+|+..+|..||.+|.||++.|+|.||.....
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 4578999999999999999999999999987543
No 37
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-41 Score=395.14 Aligned_cols=258 Identities=31% Similarity=0.502 Sum_probs=228.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC-CCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~-~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.-|++.+.||+|+-|.|.+|+|..||+.+|||+|... ..+......+.+|+-+|+-+.||||+++|++|.
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe------ 82 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE------ 82 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec------
Confidence 3456789999999999999999999999999999999866 344444567889999999999999999999983
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+..++|+|.||++ |.|.+++...+++++.++.+++.||+.|+.||
T Consensus 83 ----------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yC 128 (786)
T KOG0588|consen 83 ----------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYC 128 (786)
T ss_pred ----------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999996 68999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|..+|+||||||+|+|||..+++||+|||+|..-..+. ...+.||.|.|+|||++.|.++.+.+
T Consensus 129 H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk----------------lLeTSCGSPHYA~PEIV~G~pYdG~~ 192 (786)
T KOG0588|consen 129 HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK----------------LLETSCGSPHYAAPEIVSGRPYDGRP 192 (786)
T ss_pred hhhcceeccCCchhhhhhcccCEeeeccceeecccCCc----------------cccccCCCcccCCchhhcCCCCCCCc
Confidence 99999999999999999999999999999997532221 12456999999999999998777899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||||.|||||.|++ ||.+..-+....+.......+|. .+++++++||++||..||.+|.|.++|++|||....
T Consensus 193 sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs---~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 193 SDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS---NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred cccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC---cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 999999999999998 99988888888888777777774 567799999999999999999999999999998776
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
..
T Consensus 270 ~~ 271 (786)
T KOG0588|consen 270 TS 271 (786)
T ss_pred CC
Confidence 43
No 38
>TIGR00418 thrS threonyl-tRNA synthetase. This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether..
Probab=100.00 E-value=1.8e-40 Score=410.24 Aligned_cols=348 Identities=13% Similarity=0.055 Sum_probs=274.8
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|+++
T Consensus 188 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i 267 (563)
T TIGR00418 188 IGPGLPFWLPKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGH 267 (563)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHH
Confidence 4799999999999999999999999999999999999999 332 3467789999999999999999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeeecCCCCC-----CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCCCc
Q 000993 814 IRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 814 aR~~a~~~----~~P~r~~Y~G~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~~~ 881 (1196)
+|+++.+. ..|+|+||+|+|||+|.... |.|+|+|.|+|+||. ...+|+| +|.++.++++.||+..
T Consensus 268 ~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~-~~~~~~e~~~~i~~~~~~~~~lgl~~- 345 (563)
T TIGR00418 268 FLIFKSSLRSYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCT-EDQIKEEFKNQFRLIQKVYSDFGFSF- 345 (563)
T ss_pred HHHHhCcCCChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcC-HHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 99998753 35999999999999986542 556799999999998 5667776 9999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+++|.... . +.++-+..+.. .
T Consensus 346 ~~~~l~~~~~-~---~~~~~~~~~~~---------------------------------------~-------------- 368 (563)
T TIGR00418 346 DKYELSTRDP-E---DFIGEDELWEK---------------------------------------A-------------- 368 (563)
T ss_pred EEEEEeCCCh-h---hhcCCHHHHHH---------------------------------------H--------------
Confidence 8898885211 0 01111000000 0
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc-ccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV-EGTLLAVGGRY 1040 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~-~~~~I~~GGRY 1040 (1196)
...+. + .|..+|+ .+.+|.+ ||++||+.++|++ ....+..-+.+ .+..+++||||
T Consensus 369 ----~~~~~----------~-----~l~~~~i--~~~~~~~--~g~~y~~~~~f~~-~~~lg~~~~~~t~q~~~~~g~ry 424 (563)
T TIGR00418 369 ----EAALE----------E-----ALKELGV--PYEIDPG--RGAFYGPKIDFAF-KDALGREWQCATVQLDFELPERF 424 (563)
T ss_pred ----HHHHH----------H-----HHHhCCC--ceEEcCC--CcceecceEEEEe-ecCCCCceeeceeeeccCCHhhc
Confidence 00000 0 2344555 4667887 9999999999996 44333210111 13458999999
Q ss_pred chh-hhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHH
Q 000993 1041 DYL-LHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1113 (1196)
Q Consensus 1041 D~L-~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~ 1113 (1196)
|.+ ....|++ ..|++ ||++|+|||+.+|.+ ...+ ....+.+|+|++.+ +....+|+++++.
T Consensus 425 d~~~~~~~g~~----------~~p~ii~~Gfa~gieRli~~l~e~~~~~~p-~~~~p~~v~vi~~~-~~~~~~a~~ia~~ 492 (563)
T TIGR00418 425 DLTYVDEDNEE----------KRPVMIHRAILGSIERFIAILLEKYAGNFP-LWLAPVQVVVIPVN-ERHLDYAKKVAQK 492 (563)
T ss_pred CCEEECCCCCE----------EeeEEEEeeccCcHHHHHHHHHHhccCCCC-CcCCCceEEEEEcc-chHHHHHHHHHHH
Confidence 995 5665543 35885 999999999988842 2122 22467889999986 6778899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 000993 1114 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1114 Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~ 1183 (1196)
||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||.+|+|..++++++++.+++
T Consensus 493 LR~~Gi~v~~d~~-~~sl~~q~k~A~~~g~~~~iiiG~~E~~~~~v~vk~~~~g~q~~v~~~el~~~i~~ 561 (563)
T TIGR00418 493 LKKAGIRVDVDDR-NERLGKKIREAQKQKIPYMLVVGDKEMESLAVNVRTRKGQKLEKMSLDEFLEKLRK 561 (563)
T ss_pred HHHcCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEchhhhhCCeEEEEECCCCccceeeHHHHHHHHHh
Confidence 9999999998876 67999999999999999999999999999999999999999999999999888764
No 39
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=378.93 Aligned_cols=261 Identities=34% Similarity=0.530 Sum_probs=212.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.++...+.||+|+||.||++.+..+|..+|||.+...... ..+.+.+|+.+|++++|||||+++|.....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-------- 86 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSR-------- 86 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccc--------
Confidence 4677889999999999999999999999999998765222 266789999999999999999999763110
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...++|.|||++ |+|.+++...+ .++++.++.++.||++||+|||++
T Consensus 87 ------------------------------~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 87 ------------------------------ENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ------------------------------cCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0146899999997 69999999877 799999999999999999999999
Q ss_pred CCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|||||||||+|||++. ++.+||+|||+++...... ..........||+.|||||++.......+++|
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sD 204 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESD 204 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccc------------ccccccccccCCccccCchhhcCCCcCCccch
Confidence 9999999999999999 7999999999998754200 00112345789999999999985223345999
Q ss_pred hHHHHHHHHHhhc---CCch-hHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFST-AMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~-~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||++.||+| ||.. ....+....+.... ..|..+...+++++++|.+|+..||.+||||.++|+|+|..+..
T Consensus 205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 9999999999998 6665 33344444444433 45555566788999999999999999999999999999988765
Q ss_pred H
Q 000993 694 Y 694 (1196)
Q Consensus 694 ~ 694 (1196)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 3
No 40
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=366.23 Aligned_cols=256 Identities=14% Similarity=0.151 Sum_probs=196.7
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEE-EeecCCceEeecCCCcHHHHHHHHhCCCCc
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVK-LLTHGGDLLELSHELRLPFIRWAISNQKSS 824 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~-f~D~~G~~laLRPD~T~~iaR~~a~~~~~P 824 (1196)
.....++.+++.++++|++|||++|.||+|++. ..++.....+++ |.|.+||.++||||+|+||||+++++...|
T Consensus 5 ~~~~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~~~~ 84 (272)
T PRK12294 5 EQLIALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYPTAA 84 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcCCCC
Confidence 345667899999999999999999999999322 224344455555 446689999999999999999998765567
Q ss_pred eeEEEecCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceE-EEeCcHHHHHHHHHHcCCCH
Q 000993 825 FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD-IHLNHGDLLEAIWSWAGIKA 903 (1196)
Q Consensus 825 ~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~-i~Lg~~~i~~~~l~~lgl~~ 903 (1196)
.|+||+|+|||++++ ++|+|||+|| .+..+|+|+|.+|++++..+|..+ +. |+|||++|++++++. +
T Consensus 85 ~Rl~Y~g~VfR~~~~------~~Q~GvEliG-~~~~a~~e~l~la~~~l~~~g~~~-~~~i~lGh~~~~~~l~~~----~ 152 (272)
T PRK12294 85 TKVAYAGLIIRNNEA------AVQVGIENYA-PSLANVQQSFKLFIQFIQQQLRDN-VHFVVLGHYQLLDALLDK----S 152 (272)
T ss_pred ceEEEeccEeccCCC------cceeceEEEC-CCchhHHHHHHHHHHHHHHhCCCC-CcEEEeccHHHHHHHHhC----H
Confidence 799999999998643 8999999999 447999999999999999998765 53 899999999999984 5
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHH
Q 000993 904 EHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKAL 983 (1196)
Q Consensus 904 ~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l 983 (1196)
+.+++++++|.++|.. ++ ++++... ..+..++.. ...++++++..+........+.|
T Consensus 153 ~~~~~l~~~l~~Kn~~------------~l-~~~l~~~-------~~l~~~l~~---~~~~~l~~a~~l~~~~~~~~~~L 209 (272)
T PRK12294 153 LQTPDILSMIEERNLS------------GL-VTYLSTE-------HPIVQILKE---NTQQQLNVLEHYIPNDHPALVEL 209 (272)
T ss_pred HHHHHHHHHHHhcCHH------------HH-HHHHhhh-------hhHHHHHHh---chHHHHHHHHHhhhhhHHHHHHH
Confidence 6778899999998832 22 2333211 112233321 22457777777554333445555
Q ss_pred HHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccc
Q 000993 984 DEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1049 (1196)
Q Consensus 984 ~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~ 1049 (1196)
..| .++..++. .+.||++++|+++||||+||++|.++.+. +|++|||||+|+++||.
T Consensus 210 ~~l~~~l~~~~~~-~i~~Dl~~~r~~~YYTG~vF~~y~~~~~~--------~i~~GGRYD~Ll~~Fg~ 268 (272)
T PRK12294 210 KIWERWLHTQGYK-DIHLDITAQPPRSYYTGLFIQCHFAENES--------RVLTGGYYKGSIEGFGL 268 (272)
T ss_pred HHHHHHHHhcCCC-eEEEcccccCCCCCcCCeEEEEEECCCCC--------cccCCcCchhHHHhcCC
Confidence 555 56666765 49999999999999999999999987654 69999999999999964
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=361.28 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=227.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+.++|++-+.||+|+|+.||++.+..+|+.+|+|+++.+.-+....+++.+|+.+.+.|+|||||+++..+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------- 79 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------- 79 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------
Confidence 456889999999999999999999999999999999988776666788999999999999999999998654
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
++..+.|+|+|++.| +|..-+..+..+++..+..++.||+++|.|+|
T Consensus 80 --------------------------------~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 80 --------------------------------QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred --------------------------------cccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235678999999975 78777776677899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
.+||||||+||+|+++-+.. -+||+|||+|..+.... ..-+++|||.|||||++.. ..|+
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~----------------~~~G~~GtP~fmaPEvvrk-dpy~ 190 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE----------------AWHGFAGTPGYLSPEVLKK-DPYS 190 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc----------------ccccccCCCcccCHHHhhc-CCCC
Confidence 99999999999999996543 49999999998764111 1346799999999999998 5699
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
..+|||+.|||||-|+. ||++.+.......+.......|+ .|...++++++||++||..||.+|.|+.+.|+|||.
T Consensus 191 kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 191 KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 99999999999999985 99998777777777777777665 999999999999999999999999999999999999
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
.+-.
T Consensus 271 ~~r~ 274 (355)
T KOG0033|consen 271 CNRE 274 (355)
T ss_pred cchH
Confidence 8764
No 42
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=370.51 Aligned_cols=273 Identities=27% Similarity=0.404 Sum_probs=220.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|..++.||+|+||.|+.|.++.+|+.||||++..........++..||+++|+.++|+||+.+++.+.-
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p---------- 92 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRP---------- 92 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccc----------
Confidence 4455789999999999999999999999999998666666778899999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....-..+|+|+|+|+.+|.+++++...+++..+..+++||++||.|+||.+|+
T Consensus 93 -------------------------~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 93 -------------------------PSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred -------------------------ccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 0112345689999999999999999998899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|+|++.++.+||+|||+|+..... .....+|.++.|.+|.|||++.....|+.+.||||+
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLARYLDKF-------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred ccccchhheeeccCCCEEeccccceeecccc-------------CcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 9999999999999999999999999976422 011235778999999999999887889999999999
Q ss_pred HHHHHHhhc--C-CchhHHHHH-----------------------HHHHhhhcCCCCC-----ccccCCHHHHHHHHHcc
Q 000993 622 GIVFFELWH--P-FSTAMERQI-----------------------VLSDLKQKGELPP-----SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt--P-f~~~~~~~~-----------------------~~~~l~~~~~~p~-----~~~~~~~~l~~LI~~cL 670 (1196)
||||.||++ | |.+.+.... ...-+...+..|+ .+++..+.+.+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999996 2 221111100 0111111222222 34456788999999999
Q ss_pred cCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCCcchh
Q 000993 671 SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 714 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 714 (1196)
..||.+|+|++++|+||++. .++.++|.+.+.
T Consensus 295 ~fdP~kRita~eAL~hPYl~------------~~hdp~dEP~~~ 326 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYLA------------PYHDPEDEPVCQ 326 (359)
T ss_pred ccCccccCCHHHHhcChhhh------------hhcCCccCCCCC
Confidence 99999999999999999655 456666766544
No 43
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7e-41 Score=371.72 Aligned_cols=277 Identities=25% Similarity=0.399 Sum_probs=231.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|++++.||+|.-|+||+|+.+.++..+|+|++.+.... .....+...|-+||+.++||.++.+|+.|
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-------- 146 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-------- 146 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--------
Confidence 357899999999999999999999999999999999765432 33456778899999999999999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+.|++||||+ |+|..+.+++ ..|+++.++.|+.+++.||+|
T Consensus 147 --------------------------------et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEY 194 (459)
T KOG0610|consen 147 --------------------------------ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEY 194 (459)
T ss_pred --------------------------------eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHH
Confidence 34678999999997 4898888765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccc-cccccC-----------------CCCC-----CCC-------
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQD-----------------AAFP-----TDT------- 584 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~-~~~~~~-----------------~~~~-----~~~------- 584 (1196)
||-.|||+|||||+||||.++||+.|+||-++..... ++.... ..+. ...
T Consensus 195 LHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~ 274 (459)
T KOG0610|consen 195 LHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE 274 (459)
T ss_pred HHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence 9999999999999999999999999999999976532 111100 0000 000
Q ss_pred -----------CCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhcCC
Q 000993 585 -----------GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE 650 (1196)
Q Consensus 585 -----------~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~~~ 650 (1196)
........+++||-.|+|||++.| ...+.++|||+|||+||||+ |||.+....+....++.+...
T Consensus 275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~ 353 (459)
T KOG0610|consen 275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK 353 (459)
T ss_pred cccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence 111133467899999999999999 45799999999999999999 599999999999888887777
Q ss_pred CCCccccCCHHHHHHHHHcccCCCCCCCC----HHHHHhccCCCCchHHHH
Q 000993 651 LPPSWVAKFSEQESLLRRLMSPSPSDRPS----ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 651 ~p~~~~~~~~~l~~LI~~cL~~dP~~RPt----a~eiL~~~~~~~~~~~~~ 697 (1196)
+|... ..+..+++||+++|.+||.+|.. +.+|-+||||++++|.++
T Consensus 354 Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 354 FPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred CCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 76554 56679999999999999999998 999999999999999955
No 44
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.9e-41 Score=367.90 Aligned_cols=252 Identities=28% Similarity=0.464 Sum_probs=218.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+|++.+.||+|.||+|.+|.....|+.||||.|+... .+....-.+.+|+++|+.|+||||+++|.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------- 122 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------- 122 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh---------
Confidence 468999999999999999999998999999999997654 3444556789999999999999999999887
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+...+.|||||.. |.|++++.+++.+++.+++.|++||++|+.|||.
T Consensus 123 -------------------------------ENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHk 171 (668)
T KOG0611|consen 123 -------------------------------ENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHK 171 (668)
T ss_pred -------------------------------cCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh
Confidence 23567899999995 6999999999999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
++++|||||.+|||+|.++++||+|||++..+..... .+++||+|.|.+||++.|.++-++.+|
T Consensus 172 nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf----------------LqTFCGSPLYASPEIvNG~PY~GPEVD 235 (668)
T KOG0611|consen 172 NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF----------------LQTFCGSPLYASPEIVNGTPYKGPEVD 235 (668)
T ss_pred ccceecccchhheeecCCCCeeeeccchhhhhccccH----------------HHHhcCCcccCCccccCCCCCCCCccc
Confidence 9999999999999999999999999999987643321 356899999999999999887789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.|||||+||.|.+ ||.+.+....+.++-+....-|+. ++++.-||++||..||.+|.|+++|-.|=|...
T Consensus 236 sWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 236 SWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET----PSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred hhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 9999999999985 998887766655554433333332 347788999999999999999999999977653
No 45
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-41 Score=374.72 Aligned_cols=268 Identities=27% Similarity=0.475 Sum_probs=219.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------chhHHHHHHHHHHHHhcCCCCee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
....+++|++++.||+|.||+|.+|++..+++.||||++.+.... ....+++.+|+.+|+++.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 445689999999999999999999999999999999999764321 11235899999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC-CCHHHHH
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAW 522 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~ 522 (1196)
+++.+.-+ .....+|||+|||...-..+...... +++.+++
T Consensus 172 ~LiEvLDD--------------------------------------P~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar 213 (576)
T KOG0585|consen 172 KLIEVLDD--------------------------------------PESDKLYLVLEYCSKGEVKWCPPDKPELSEQQAR 213 (576)
T ss_pred EEEEeecC--------------------------------------cccCceEEEEEeccCCccccCCCCcccccHHHHH
Confidence 99988622 23678999999997543344444455 9999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
+|+.+++.||+|||.+|||||||||+|+||+++|++||+|||.+....... ..+........+|||+|||
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------~~~~d~~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------DEGSDDQLSRTVGTPAFFA 283 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC----------ccccHHHHhhcCCCccccc
Confidence 999999999999999999999999999999999999999999997653221 1111222334799999999
Q ss_pred chhccCC---CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 603 PEIEQGW---PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 603 PE~l~~~---~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
||...+. ...+.+.||||+||+||-|+. ||.+....+...++......+|.. ....+.+++||++||++||.+
T Consensus 284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhh
Confidence 9998762 235689999999999999984 999999888888877755555543 345678999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|.+..+|..|||..+.
T Consensus 363 Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 363 RITLPDIKLHPWVTRD 378 (576)
T ss_pred eeehhhheecceeccC
Confidence 9999999999997654
No 46
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=384.38 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|....+||+|+.|.||.|+...+++.||||.+.+.... ..+-+++|+.+|+..+|+|||.++..|+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------- 341 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--------- 341 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc---------
Confidence 4566678999999999999999999999999999876554 34568899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||++ |+|.+++.. ..++|.++..++.+++.||+|||.+|
T Consensus 342 -------------------------------~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~g 389 (550)
T KOG0578|consen 342 -------------------------------GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARG 389 (550)
T ss_pred -------------------------------cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcc
Confidence 356899999996 587777754 44999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||||.+|||++.+|.+||+|||+|..+.... ....+.+|||.|||||++.. ..|++++|||
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~---------------~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW 453 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ---------------SKRSTMVGTPYWMAPEVVTR-KPYGPKVDIW 453 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeecccccc---------------CccccccCCCCccchhhhhh-cccCccccch
Confidence 9999999999999999999999999998775432 13467799999999999998 5799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+++||+- ||....+-.....+..........+...++.+++|+.+||+.||.+|+++.++|+|||++.-
T Consensus 454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 454 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred hhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999994 77765554444333332222334566788999999999999999999999999999998543
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-39 Score=370.99 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=213.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------- 71 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc---------
Confidence 478999999999999999999999999999999975432 2234557889999999999999999987652
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+||||++ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 120 (291)
T cd05612 72 -------------------------------DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120 (291)
T ss_pred -------------------------------cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di 181 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------TWTLCGTPEYLAPEVIQS-KGHNKAVDW 181 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecCcchhccCC------------------cccccCChhhcCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|+|++ ||..................+|. ..++.+++||++||+.||.+||+ ++++++|+|+.
T Consensus 182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR---HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc---cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 999999999997 88776665555554443333333 33678999999999999999995 99999999999
Q ss_pred CchHHH
Q 000993 691 QMEYEL 696 (1196)
Q Consensus 691 ~~~~~~ 696 (1196)
...+..
T Consensus 259 ~~~~~~ 264 (291)
T cd05612 259 SVDWDD 264 (291)
T ss_pred CCCHHH
Confidence 877653
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=377.87 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=215.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|++.+.||+|+||.||+|+++.+|+.||||++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 89 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD----- 89 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----
Confidence 346899999999999999999999999999999999975432 22334678899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++||||. ++|.+++.....+++..++.++.||+.||+||
T Consensus 90 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 134 (329)
T PTZ00263 90 -----------------------------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYL 134 (329)
T ss_pred -----------------------------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.+
T Consensus 135 H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~ 195 (329)
T PTZ00263 135 HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------TFTLCGTPEYLAPEVIQS-KGHGKA 195 (329)
T ss_pred HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------cceecCChhhcCHHHHcC-CCCCCc
Confidence 9999999999999999999999999999999754211 123579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~ 687 (1196)
+|||||||++|||++ ||...........+......+|. ..++.+++||++||+.||.+||+ +++++.|+
T Consensus 196 ~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 196 VDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN---WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred ceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999999997 88766555444444333222332 24568999999999999999996 79999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||....+..+
T Consensus 273 ~f~~~~~~~~ 282 (329)
T PTZ00263 273 YFHGANWDKL 282 (329)
T ss_pred ccCCCCHHHH
Confidence 9998766543
No 49
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.1e-39 Score=365.66 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.++||.|+||.||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------- 73 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIH--------- 73 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEc---------
Confidence 57899999999999999999999999999999998754322 23356789999999999999999998862
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+||||++++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 122 (288)
T cd07871 74 -------------------------------TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122 (288)
T ss_pred -------------------------------CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234689999999999999887544 578999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------ccccCceecccccChHHhcCCcccCcHHHH
Confidence 99999999999999999999999999997532111 012335789999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+.........+. .|. .....++++.+||++
T Consensus 188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence 999999999997 77654443332222111110 000 012345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.||.+|||++++++||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999997
No 50
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.9e-39 Score=368.38 Aligned_cols=258 Identities=26% Similarity=0.401 Sum_probs=205.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+++.||||+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~---------- 73 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIH---------- 73 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEe----------
Confidence 6899999999999999999999999999999998754322 22346778999999999999999998873
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 74 ------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 74 ------------------------------TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred ------------------------------cCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23578999999999998888654 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++|||
T Consensus 124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 188 (303)
T cd07869 124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMW 188 (303)
T ss_pred eecCCCCHHHEEECCCCCEEECCCCcceeccCCC---------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHH
Confidence 9999999999999999999999999987432111 1123457899999999987756689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CCCcc------ccCCHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LPPSW------VAKFSEQESLL 666 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p~~~------~~~~~~l~~LI 666 (1196)
||||++|||++ ||....+.......+..... .+..+ ...++.+.+||
T Consensus 189 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 268 (303)
T cd07869 189 GVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLA 268 (303)
T ss_pred HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHH
Confidence 99999999997 77654332221111110000 00000 01235788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.+||+.||.+|||+.++++|+||.+...
T Consensus 269 ~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 269 SKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred HHHhccCchhccCHHHHhcCcccccCCh
Confidence 9999999999999999999999988754
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.6e-39 Score=372.74 Aligned_cols=265 Identities=28% Similarity=0.408 Sum_probs=208.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|+++.+|+.||||++...........++.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 72 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------- 72 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--------
Confidence 488999999999999999999999999999998754333344567889999999999999999998874321
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
......+|+|||||+++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 73 ---------------------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred ---------------------------CCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 01234689999999999999998888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 620 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwS 620 (1196)
||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+. ..++.++||||
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc------------cccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 9999999999999999999999999754221100 0112345799999999998652 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHH--------------------------HHhhhcCCC--CCccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVL--------------------------SDLKQKGEL--PPSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~--------------------------~~l~~~~~~--p~~~~~~~~~l~~LI~~c 669 (1196)
|||++|||++ ||.......... ..+...... ...+...++.+.++|.+|
T Consensus 194 lGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (338)
T cd07859 194 IGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERL 273 (338)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHH
Confidence 9999999997 665432211100 000000111 112234567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||++|||++++++|+||.+..
T Consensus 274 l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 274 LAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred cCcCcccCCCHHHHhcCchhhhcC
Confidence 999999999999999999998754
No 52
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=349.03 Aligned_cols=259 Identities=25% Similarity=0.448 Sum_probs=221.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--C----chhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--S----LPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~--~----~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
+.+.|+-.+.||+|..+.|.+|.++.+|+.+|+|+|..... + .+..+.-.+|+.+|+++ .||||+++.+.|
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y-- 92 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY-- 92 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec--
Confidence 45678888999999999999999999999999999976431 1 12334566899999998 799999999876
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
+.+.++|+|+|.|+ |.|.|+|.+.-.+++..+++++.|+..
T Consensus 93 --------------------------------------es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 93 --------------------------------------ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFE 134 (411)
T ss_pred --------------------------------------cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHH
Confidence 23567899999997 799999999999999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 608 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 608 (1196)
|++|||.++|+||||||+|||++++.++||+|||+|+.+.... .....||||+|+|||.+..
T Consensus 135 gVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge----------------kLrelCGTPgYLAPEtikC~m 198 (411)
T KOG0599|consen 135 GVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE----------------KLRELCGTPGYLAPETIKCSM 198 (411)
T ss_pred HHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch----------------hHHHhcCCCcccChhheeeec
Confidence 9999999999999999999999999999999999999875432 1245699999999998753
Q ss_pred ---CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 609 ---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 609 ---~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
.+.|+..+|+||+|||||.|+. ||......-....++..+..+ .|.|...+.+.++||.+||+.||.+|.|++
T Consensus 199 ~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritak 278 (411)
T KOG0599|consen 199 YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAK 278 (411)
T ss_pred ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence 4569999999999999999995 887666555555555555443 578999999999999999999999999999
Q ss_pred HHHhccCCCCch
Q 000993 682 ELLQDALPPQME 693 (1196)
Q Consensus 682 eiL~~~~~~~~~ 693 (1196)
++|+||||.++.
T Consensus 279 e~LaHpff~q~~ 290 (411)
T KOG0599|consen 279 EALAHPFFIQIA 290 (411)
T ss_pred HHhcChHHHHHH
Confidence 999999998764
No 53
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.9e-39 Score=363.16 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+++.||||++............+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR---------- 70 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe----------
Confidence 4799999999999999999999999999999999765544445567889999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+||||+++++.+.+. ....+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 71 ------------------------------RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred ------------------------------cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 235689999999876555554 4457999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||+++...... ........||+.|+|||++.+ ..++.++|||
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diw 185 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------NANYTEYVATRWYRSPELLLG-APYGKAVDMW 185 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccc--------------cccccccccccccCCcHHHcC-CCCCCchhHH
Confidence 9999999999999999999999999998653211 011223578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-------------------C----------ccccCCHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------P----------SWVAKFSEQESLLR 667 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------~----------~~~~~~~~l~~LI~ 667 (1196)
||||++|||++ ||................+..| . .....++.+.+||+
T Consensus 186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMK 265 (287)
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHH
Confidence 99999999996 7765443322221111111110 0 01124567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||.+|||++++++||||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999997
No 54
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=7.6e-40 Score=410.71 Aligned_cols=360 Identities=14% Similarity=0.138 Sum_probs=271.0
Q ss_pred cccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC--CcccccceEEEeecCCceEeecC
Q 000993 734 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH 807 (1196)
Q Consensus 734 ~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP 807 (1196)
.+.+++.+.|++||+|.++.+++.|++.++++|.+|||++|.||+| ++... .+...++||.|.|.+|+.++|||
T Consensus 252 ~~~~~~~~~G~~~~lp~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~~~LRP 331 (638)
T PRK00413 252 LFHFQEEAPGLPFWHPKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEEYALKP 331 (638)
T ss_pred EEEecCCCCcceEEcccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcEEEEec
Confidence 3455677799999999999999999999999999999999999999 33322 35668999999999999999999
Q ss_pred CCcHHHHHHHHhCC----CCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccc-h-HHHHHHHHHHHHHc
Q 000993 808 ELRLPFIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALT-E-AEVLKVTMDIVTRF 876 (1196)
Q Consensus 808 D~T~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~a-D-aEvI~la~~~L~~l 876 (1196)
+.|++++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+ | +|+|.++.++|+.|
T Consensus 332 ~~~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~~~~~~e~~eii~l~~~~~~~l 411 (638)
T PRK00413 332 MNCPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTPEQIEEEVKKVIDLILDVYKDF 411 (638)
T ss_pred CCcHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998753 3599999999999999986 2 55679999999999988764 6 99999999999999
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+++ +.++||++ .. ..+|.++.+......+ ++.+...+++.+..+...++
T Consensus 412 g~~~-~~i~l~~r--~~---~~~g~~~~~~~~~~~l----------------------~~~l~~~g~~~~~~~~~~~~-- 461 (638)
T PRK00413 412 GFED-YEVKLSTR--PE---KRIGSDEMWDKAEAAL----------------------KEALDELGLDYEIAPGEGAF-- 461 (638)
T ss_pred CCce-EEEEEecC--Cc---ccCCCHHHHHHHHHHH----------------------HHHHHHcCCCceecCCcccc--
Confidence 9985 99999997 22 2456654322111111 11122222222211111111
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCC-CccceEEEEEecCCCCccccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES-YHRNLFFQVFSVKEKYPATLVEGTLLA 1035 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~-YYTG~vFe~~~~~~~~~~~~~~~~~I~ 1035 (1196)
.|+. +.. .+..++.++ ..+ ..+.+|+++.++++ ||||.+++.
T Consensus 462 --~~~~------~~~------~~~~~~~~~----~~l-~~~~~d~~~~~~~dl~Yt~~~~~~------------------ 504 (638)
T PRK00413 462 --YGPK------IDF------QLKDALGRE----WQC-GTIQLDFNLPERFDLTYVGEDGEK------------------ 504 (638)
T ss_pred --ccce------EEE------EeecCCCCe----EEe-ccEeecccChhhcCCEEECCCCCc------------------
Confidence 1210 000 000111111 001 24677888888888 677764211
Q ss_pred cccccchhhhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHH
Q 000993 1036 VGGRYDYLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1109 (1196)
Q Consensus 1036 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1109 (1196)
..|++ |++-++||++.+|.+ +..+. ..++.+|+|++.+ +....+|.+
T Consensus 505 -------------------------~~p~~i~~~~~g~~eRli~~l~e~~~~~~p~-~~~p~~v~Ii~~~-~~~~~~a~~ 557 (638)
T PRK00413 505 -------------------------HRPVMIHRAILGSMERFIGILIEHYAGAFPT-WLAPVQVVVLPIT-DKHADYAKE 557 (638)
T ss_pred -------------------------cCcEEEEecceehHHHHHHHHHHHcCCCCCc-ccCcceEEEEEeC-hhHHHHHHH
Confidence 13666 667789999998853 32222 2357789999986 667789999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
++++||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||++++|..++++++++.|++.+++.
T Consensus 558 i~~~Lr~~gi~v~~d~~-~~~l~kki~~A~~~g~~~~iiiG~~E~~~~~v~vr~~~~~~q~~i~~~~l~~~i~~~~~~~ 635 (638)
T PRK00413 558 VAKKLKAAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGKDLGTMSLDEFIERLLEEIASR 635 (638)
T ss_pred HHHHHHhCCCEEEEECC-CCCHhHHHHHhhccCCCEEEEEcchhhhcCeEEEEECCCCccceeeHHHHHHHHHHHHhhc
Confidence 99999999999998877 6799999999999999999999999999999999999999999999999999999887754
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.6e-39 Score=372.56 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=208.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------------- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------------- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE---------------
Confidence 369999999999999999999999999975332 2233456789999999999999999998773
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 66 -------------------------THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred -------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2457899999997 58999998888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 184 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCC---------------CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence 99999999999999999999987421110 11234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+| ...++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQD 261 (323)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 8876555444444433333333 34567999999999999999999 899999999999987653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (323)
T cd05571 262 V 262 (323)
T ss_pred H
Confidence 3
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=375.05 Aligned_cols=253 Identities=33% Similarity=0.554 Sum_probs=222.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+.++++|+|+||.+++++++.+++.||+|+|+....+....+...+|+.++++++|||||.|++.|++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------- 75 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------- 75 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-------
Confidence 5789999999999999999999999999999999999888777777899999999999999999999998653
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+++|+|+||+ |+|.+.+.+.. .|+++.++.|+.||+.|+.|||
T Consensus 76 --------------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 --------------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred --------------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 445899999996 58999887544 5999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|+|||||+.|||++.++.|||+|||+|+.+.... -...+.+|||.||.||++.+ -.|+.|+
T Consensus 124 ~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------~~a~tvvGTp~YmcPEil~d-~pYn~KS 187 (426)
T KOG0589|consen 124 ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------SLASTVVGTPYYMCPEILSD-IPYNEKS 187 (426)
T ss_pred hhhhhcccchhhhhhccccCceeecchhhhhhcCCch---------------hhhheecCCCcccCHHHhCC-CCCCccC
Confidence 9999999999999999999999999999999875432 01346799999999999999 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||||++|||++ +|...+......++.... ..|.....+.+++.+|+.||..+|..||++.++|.+|..
T Consensus 188 DiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 188 DIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred cchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99999999999996 788777777777776644 445555667799999999999999999999999998643
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.8e-39 Score=372.58 Aligned_cols=258 Identities=24% Similarity=0.372 Sum_probs=214.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++.+.||+|+||.||+|.++.++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--- 102 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--- 102 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe---
Confidence 345689999999999999999999987555 6899999865332 22345678899999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 103 -------------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~ 145 (340)
T PTZ00426 103 -------------------------------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE 145 (340)
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999996 599999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++.... .....+||+.|||||++.+ ..++
T Consensus 146 ~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~ 206 (340)
T PTZ00426 146 YLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT------------------RTYTLCGTPEYIAPEILLN-VGHG 206 (340)
T ss_pred HHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC------------------CcceecCChhhcCHHHHhC-CCCC
Confidence 99999999999999999999999999999999975421 1123579999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~ 685 (1196)
.++|||||||++|||++ ||..................+|+ ..++.+.++|++||+.||.+|+ +++++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999999997 88766555444444443333443 3456899999999999999995 8999999
Q ss_pred ccCCCCchHHH
Q 000993 686 DALPPQMEYEL 696 (1196)
Q Consensus 686 ~~~~~~~~~~~ 696 (1196)
||||.+..+..
T Consensus 284 hp~f~~~~~~~ 294 (340)
T PTZ00426 284 HPWFGNIDWVS 294 (340)
T ss_pred CCCcCCCCHHH
Confidence 99999887653
No 58
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-39 Score=356.74 Aligned_cols=266 Identities=29% Similarity=0.496 Sum_probs=213.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC-eeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn-IV~l~~~~~e~~~~~~~ 458 (1196)
+..|..+++||+|+||+||+|+.+.+|+.||+|+++........-....+|+.+|+.++|+| ||++++++.....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~---- 85 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN---- 85 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc----
Confidence 56788889999999999999999999999999999876553334456789999999999999 9999988743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+++|+||+..+|..++.... .++...++.++.||+.||+|
T Consensus 86 ------------------------------~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 86 ------------------------------HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred ------------------------------ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12245789999999999999998655 58888999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+||||+.+|.+||+|||+|+....+. ...+..++|.+|.|||++.|...|+.
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~---------------~~yt~evvTlWYRaPEvLlGs~~Ys~ 200 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM---------------RTYTPEVVTLWYRAPEVLLGSTSYST 200 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc---------------ccccccEEEeeccCHHHhcCCCcCCC
Confidence 999999999999999999999999999999999654221 12356689999999999999778999
Q ss_pred cchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCCC-CCcc--------------------------ccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGEL-PPSW--------------------------VAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~~-p~~~--------------------------~~~~~~l~~ 664 (1196)
..||||+|||+.||++ | |.+.++......+.+.-+.. ...| ....++..+
T Consensus 201 ~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~d 280 (323)
T KOG0594|consen 201 SVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIE 280 (323)
T ss_pred CcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHH
Confidence 9999999999999997 4 44444433333322211110 0011 111236789
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
++.+||+.+|.+|.|++.+|.|++|.....
T Consensus 281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 281 LLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 999999999999999999999999987643
No 59
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=372.28 Aligned_cols=253 Identities=28% Similarity=0.456 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|..++.||+|+||.||+|.+..+++.||+|++++.... ...+++.+|+.+|.+++||||.++|++|+.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~--------- 82 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK--------- 82 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee---------
Confidence 3566678999999999999999999999999999876543 456789999999999999999999999854
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...++|+||||+ |++.+++.....+++..+..++++++.||.|||+++
T Consensus 83 -------------------------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~ 131 (467)
T KOG0201|consen 83 -------------------------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK 131 (467)
T ss_pred -------------------------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc
Confidence 456799999996 599999998888899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
.+|||||+.|||+..+|.+||+|||.+..+.... ....+++|||.|||||++++ ..|+.|+|||
T Consensus 132 kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---------------~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIW 195 (467)
T KOG0201|consen 132 KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---------------KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIW 195 (467)
T ss_pred eecccccccceeEeccCcEEEEecceeeeeechh---------------hccccccccccccchhhhcc-ccccchhhhh
Confidence 9999999999999999999999999998654221 12367899999999999996 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||+.+||++ |+...+++....-+ ....||... ..++.+++||..||+.||+.||+|.++|+|.|.+...
T Consensus 196 SLGITaiEla~GePP~s~~hPmrvlflI---pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 196 SLGITAIELAKGEPPHSKLHPMRVLFLI---PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hhhHHHHHHhcCCCCCcccCcceEEEec---cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 99999999997 77776664332211 222333332 4566799999999999999999999999999887743
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-38 Score=367.97 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------- 71 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------- 71 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE---------
Confidence 479999999999999999999999999999999975422 2233457889999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 120 (333)
T cd05600 72 -------------------------------DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL 120 (333)
T ss_pred -------------------------------cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.... .....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 181 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------------------YANSVVGSPDYMAPEVLRG-KGYDFTVDY 181 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCcCCccccc------------------ccCCcccCccccChhHhcC-CCCCCccce
Confidence 999999999999999999999999999975421 1234579999999999988 478999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|||||++|||++ ||......+......... ...|.. ....++++.+||.+||..+|.+||++.++++|+||.
T Consensus 182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 999999999996 887655544333222211 111211 124567899999999999999999999999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (333)
T cd05600 262 EVDWNEL 268 (333)
T ss_pred CCCHHHH
Confidence 8876544
No 61
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-38 Score=371.69 Aligned_cols=275 Identities=26% Similarity=0.432 Sum_probs=214.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------- 71 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------- 71 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe---------
Confidence 479999999999999999999999999999999975322 2233456888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...+|+|||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (363)
T cd05628 72 -------------------------------DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120 (363)
T ss_pred -------------------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 59999999888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccC-----CCCCCC------CC---------CccccCcCccccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-----AAFPTD------TG---------GVSVDGTGQVGTY 598 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~-----~~~~~~------~~---------~~~~~~~~~~GT~ 598 (1196)
||+||||||+|||++.++++||+|||+++.+........ ...+.+ .. .........+||+
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 200 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTP 200 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCc
Confidence 999999999999999999999999999986532110000 000000 00 0000123468999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.... ..+|+ ....+++++++|.+|+. +
T Consensus 201 ~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~ 277 (363)
T cd05628 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-E 277 (363)
T ss_pred cccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-C
Confidence 9999999987 568999999999999999996 887666555554444322 22333 23457789999998765 4
Q ss_pred CC---CCCCHHHHHhccCCCCchHHHHH
Q 000993 674 PS---DRPSATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 674 P~---~RPta~eiL~~~~~~~~~~~~~~ 698 (1196)
|. .||++++|++||||....++.+.
T Consensus 278 ~~~r~~r~~~~ei~~hp~f~~~~~~~~~ 305 (363)
T cd05628 278 WEHRIGAPGVEEIKTNPFFEGVDWEHIR 305 (363)
T ss_pred hhhcCCCCCHHHHhCCCCCCCCCHHHHH
Confidence 44 56899999999999999877553
No 62
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.2e-38 Score=372.10 Aligned_cols=273 Identities=24% Similarity=0.398 Sum_probs=212.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--------- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--------- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec---------
Confidence 68999999999999999999999999999999975432 22345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 599999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC----C------C---------CC-------------CCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA----F------P---------TD-------------TGGV 587 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~----~------~---------~~-------------~~~~ 587 (1196)
|+||||||+|||++.++++||+|||+++.+.......... . + .. ....
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ 201 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence 9999999999999999999999999986442110000000 0 0 00 0000
Q ss_pred cccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHH
Q 000993 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 663 (1196)
Q Consensus 588 ~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~ 663 (1196)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+........... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 280 (381)
T cd05626 202 RCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAV 280 (381)
T ss_pred ccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHH
Confidence 001234689999999999987 568999999999999999997 88766555444444322211 1223345678999
Q ss_pred HHHHHcc--cCCCCCCCCHHHHHhccCCCCchHH
Q 000993 664 SLLRRLM--SPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 664 ~LI~~cL--~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
+||.+|+ ..+|..||++.++++|+||.+..+.
T Consensus 281 dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 281 DLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 9999955 5556669999999999999987654
No 63
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2e-38 Score=369.62 Aligned_cols=275 Identities=29% Similarity=0.461 Sum_probs=217.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||+||+|++..+|+.||||+++..... ......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------- 71 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee---------
Confidence 4799999999999999999999999999999999754322 234567889999999999999999997763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 72 -------------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred -------------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC--------------CCCCCCccccCcCccccccCCCch
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF--------------PTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
||+||||||+|||++.++.+||+|||+++............. ...............||+.|+|||
T Consensus 121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 999999999999999999999999999986543220000000 000000011223457999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~--~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
++.+ ..++.++|||||||+||||++ ||.............. ....+|. ....++++.+||.+||. ||.+||+
T Consensus 201 ~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 201 VLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence 9988 578999999999999999997 8876665544444333 2222333 23357899999999997 9999999
Q ss_pred -HHHHHhccCCCCchHHHHH
Q 000993 680 -ATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 680 -a~eiL~~~~~~~~~~~~~~ 698 (1196)
++++++|+|+....++...
T Consensus 278 s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 278 SFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 9999999999998776443
No 64
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.9e-38 Score=357.09 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+..+.||+|+||+||+|.++.+|+.||||++...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--------- 71 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc---------
Confidence 378899999999999999999999999999998754322 2223467899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++++||||+ |+|.+++... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 72 -------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 5888777543 368999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05631 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----------------TVRGRVGTVGYMAPEVINN-EKYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------eecCCCCCCCccCHhhhcC-CCCCcccC
Confidence 999999999999999999999999999997542110 1134579999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHH---HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~---~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
||||||++|||++ ||....... ....... . .........++++.+||++||+.||.+||+ ++++++|
T Consensus 184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-E-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-c-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 776543321 1111111 1 111222345678999999999999999997 9999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||.+..+..+.
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05631 262 PIFKNINFKRLE 273 (285)
T ss_pred HhhcCCCHHHHH
Confidence 999998876554
No 65
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.4e-38 Score=370.20 Aligned_cols=275 Identities=28% Similarity=0.465 Sum_probs=215.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------- 71 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------
Confidence 479999999999999999999999999999999975432 2233456788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (364)
T cd05599 72 -------------------------------DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL 120 (364)
T ss_pred -------------------------------cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 58999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC---------------CCCCCC--------CccccCcCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA---------------FPTDTG--------GVSVDGTGQV 595 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~---------------~~~~~~--------~~~~~~~~~~ 595 (1196)
||+||||||+|||++.++.+||+|||+++.+.......... .+.... .......+.+
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTV 200 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997653221100000 000000 0000112357
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............+ +.....++++.+||++||.
T Consensus 201 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~ 279 (364)
T cd05599 201 GTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC 279 (364)
T ss_pred cCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999987 568999999999999999997 7876655554444333222211 2223457899999999997
Q ss_pred CCCCCCCC---HHHHHhccCCCCchHHHH
Q 000993 672 PSPSDRPS---ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 672 ~dP~~RPt---a~eiL~~~~~~~~~~~~~ 697 (1196)
+|.+|++ +.++++|+||....+..+
T Consensus 280 -~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 280 -EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred -CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 9999998 999999999999876643
No 66
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.7e-38 Score=355.08 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=200.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|++.. +|+.||+|+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--- 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--- 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc---
Confidence 378999999999999999999854 478899999876544333344566787777766 6999999998874211
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+++||||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 --------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 78 --------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred --------------------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123568999999999999998753 458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 188 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------MALTSVVVTLWYRAPEVLLQ-SSYAT 188 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------cccccccccccccChHHHhC-CCCCC
Confidence 99999999999999999999999999999999754211 11234578999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CC-----------------------ccccCCHHHHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PP-----------------------SWVAKFSEQESLLR 667 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~-----------------------~~~~~~~~l~~LI~ 667 (1196)
++|||||||++|||++ ||......+....+....... +. .....++.+++||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999996 676555444333332211100 00 01234557789999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||++|||+.++|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999997
No 67
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-39 Score=368.62 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=199.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..+.+++.||+|.||+||+|.+. ....||+|.++....+ .+.|.+|+++|++|+|+|||+++++|..
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--------- 272 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTK--------- 272 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEec---------
Confidence 45677889999999999999997 3348999999754332 4678899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|||||||+ |+|.++|+. ...+...+.+.++.|||+||+||++
T Consensus 273 -------------------------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 273 -------------------------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES 321 (468)
T ss_pred -------------------------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 235899999996 899999987 4569999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+++|||||..+|||++++..+||+|||+|+....+... ...+..-..-|.|||++.. ..++.|||
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~--------------~~~~~kfPIkWtAPEa~~~-~~FS~kSD 386 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT--------------ASEGGKFPIKWTAPEALNY-GKFSSKSD 386 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCcee--------------ecCCCCCCceecCHHHHhh-CCcccccc
Confidence 99999999999999999999999999999954433211 1122334567999999987 67999999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
||||||+||||+| |+......+. +..+. .+...|.+..+++++.++|..||..+|++|||++.+.
T Consensus 387 VWSFGVlL~E~fT~G~~py~~msn~ev-~~~le-~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 387 VWSFGVLLWELFTYGRVPYPGMSNEEV-LELLE-RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred eeehhhhHHHHhccCCCCCCCCCHHHH-HHHHh-ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999997 6655555444 44444 3343444556888999999999999999999999665
No 68
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-39 Score=336.46 Aligned_cols=253 Identities=28% Similarity=0.460 Sum_probs=221.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|++.+.||+|-||.||+|+.+.++..||+|++.+... ......++.||+++-+.|+||||+++|++|.+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd------ 93 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD------ 93 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec------
Confidence 36899999999999999999999999999999999975542 23345689999999999999999999999843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE--SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~--~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+++||.+ |.+...|. ...+|++..++.|+.|+|.||.|
T Consensus 94 ----------------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y 139 (281)
T KOG0580|consen 94 ----------------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLY 139 (281)
T ss_pred ----------------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHH
Confidence 567899999996 79999998 66789999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+|..+||||||||+|+|++..+.+||+|||.+..-. ....++.|||..|.|||...+ ..++.
T Consensus 140 ~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------~~kR~tlcgt~dyl~pEmv~~-~~hd~ 201 (281)
T KOG0580|consen 140 CHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------SNKRKTLCGTLDYLPPEMVEG-RGHDK 201 (281)
T ss_pred hccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------CCCceeeecccccCCHhhcCC-CCccc
Confidence 999999999999999999999999999999986421 123567899999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.+|+|++|++.||++. ||......+...++......+| ..++.++++||.+|+..+|.+|.+..+++.|||...
T Consensus 202 ~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 202 FVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred hhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 9999999999999985 8988887777777666565666 455679999999999999999999999999999764
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 279 ~ 279 (281)
T KOG0580|consen 279 N 279 (281)
T ss_pred c
Confidence 3
No 69
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=394.60 Aligned_cols=277 Identities=24% Similarity=0.411 Sum_probs=231.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+||+++++||+|+||.|.+++++.+++.||+|++++-... ......|..|-.+|..-+.+-|++++-+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF---------- 144 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF---------- 144 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh----------
Confidence 7999999999999999999999999999999998753211 22345688888999999999999998776
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|+||||++ |+|..++.+.+++++..+++|+..|+.||.-||+.
T Consensus 145 ------------------------------QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m 194 (1317)
T KOG0612|consen 145 ------------------------------QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM 194 (1317)
T ss_pred ------------------------------cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999996 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
|+|||||||+|||||..||+||+|||.|-.+..++. ......+|||.|.+||+|+. .+.|++
T Consensus 195 gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~--------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ 260 (1317)
T KOG0612|consen 195 GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT--------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGR 260 (1317)
T ss_pred cceeccCCcceeEecccCcEeeccchhHHhcCCCCc--------------EEeccccCCCCccCHHHHHhhcCCccccCC
Confidence 999999999999999999999999999987653321 22355799999999999863 256999
Q ss_pred cchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHHHhc
Q 000993 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~ 686 (1196)
.+||||+||++|||+ |||+...-.+.+-+++..+ ..+| ....++.++++||+++++ +|..|.. ++++-.|
T Consensus 261 ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 261 ECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred ccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 999999999999999 5999988877777777663 3456 344588999999999987 4788887 9999999
Q ss_pred cCCCCchHHHHHHH----HHhcCCCCCCcch
Q 000993 687 ALPPQMEYELLDNI----LRMMHSSEDTSIY 713 (1196)
Q Consensus 687 ~~~~~~~~~~~~~~----~~~~~~~~d~~~~ 713 (1196)
|||.+..|+.+... ...+.++.|.+.+
T Consensus 339 pFF~g~~W~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDWDNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence 99999999655442 2233444454444
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.3e-38 Score=361.70 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=205.6
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||.||+|++..+++.||+|+++... ........+.+|+.+++.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------------- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ----------------- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----------------
Confidence 799999999999999999999999987532 22334567889999999999999999988763
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||++||+|||||
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 64 -----------------------SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -----------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 2457899999997 5999999888889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ 184 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDD---------------DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLY 184 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCC---------------CccccccCCcccCCHHHHcC-CCCCCccceechhHHHH
Confidence 999999999999999999987532110 01234579999999999987 56899999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCchHH
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYE 695 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~ 695 (1196)
||++ ||......+...........+| ...++++.+||.+||+.||.+|| ++.++++||||.+..+.
T Consensus 185 el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~ 256 (312)
T cd05585 185 EMLTGLPPFYDENVNEMYRKILQEPLRFP---DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK 256 (312)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence 9997 8876655555444444333333 24567899999999999999997 58999999999987544
No 71
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.8e-38 Score=370.99 Aligned_cols=275 Identities=27% Similarity=0.446 Sum_probs=212.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+++.++|||||+++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------- 71 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--------- 71 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE---------
Confidence 479999999999999999999999999999999864322 2233467888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 120 (377)
T cd05629 72 -------------------------------DAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120 (377)
T ss_pred -------------------------------cCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc--------CCCCCC---------CCC---------------C
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ--------DAAFPT---------DTG---------------G 586 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~--------~~~~~~---------~~~---------------~ 586 (1196)
||+||||||+|||++.++.+||+|||+++.+....... ...... ... .
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKN 200 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence 99999999999999999999999999997432110000 000000 000 0
Q ss_pred ccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHH
Q 000993 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQ 662 (1196)
Q Consensus 587 ~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l 662 (1196)
......+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+......+ .+.....++++
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 279 (377)
T cd05629 201 RRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEA 279 (377)
T ss_pred ccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHH
Confidence 0001123579999999999987 568999999999999999997 786655544443333211111 12333467799
Q ss_pred HHHHHHcccCCCCCC---CCHHHHHhccCCCCchHHHH
Q 000993 663 ESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~R---Pta~eiL~~~~~~~~~~~~~ 697 (1196)
++||.+||. +|.+| +++.++++|+||....++.+
T Consensus 280 ~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 280 EDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 999999998 67665 59999999999998876644
No 72
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.8e-38 Score=364.05 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=207.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------------- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------------- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------------
Confidence 368999999999999999999999999975422 2234567889999999999999999998763
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+|+||||++ ++|.+++.....+++.+++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 66 -------------------------TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred -------------------------cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2457899999996 58998988888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi 184 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDA---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcc---------------cccccccCCcCccChhhhcC-CCCCccCCccccchH
Confidence 99999999999999999999987432110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+|. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~ 261 (328)
T cd05593 185 MYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQD 261 (328)
T ss_pred HHHHhhCCCCCCCCCHHHHHHHhccCCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999996 88765554444443333333333 4567899999999999999997 899999999999877653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (328)
T cd05593 262 V 262 (328)
T ss_pred H
Confidence 3
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.3e-38 Score=363.65 Aligned_cols=252 Identities=26% Similarity=0.373 Sum_probs=208.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------------- 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--------------
Confidence 369999999999999999999999999975321 22344567889999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 357899999997 58999998888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 184 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCC---------------CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence 99999999999999999999987431110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+|. ..++++.+||++||+.||.+|| ++.++++|+||.+..+..
T Consensus 185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~ 261 (323)
T cd05595 185 MYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 261 (323)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999996 88766555444444433333333 4567999999999999999998 899999999999887653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (323)
T cd05595 262 V 262 (323)
T ss_pred H
Confidence 3
No 74
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=364.53 Aligned_cols=258 Identities=30% Similarity=0.507 Sum_probs=224.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~ 454 (1196)
......|++.+.||+|.||.||+|+++.+|+.+|+|++...... ......+.+|+.+|+.+. |||||.++++|-
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e---- 106 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE---- 106 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE----
Confidence 44557899999999999999999999999999999999765532 234568999999999998 999999999883
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...+|+|||+|. |.|.+.+... .+++..+..++.||+.+++
T Consensus 107 ------------------------------------~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 107 ------------------------------------DPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred ------------------------------------cCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH
Confidence 3457899999996 6899988776 4999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCC----CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||+.||+||||||+|+|+... +.+|++|||+|...... ......+|||.|+|||++..
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~----------------~~~~~~~Gtp~y~APEvl~~- 212 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG----------------ERLHTIVGTPEYVAPEVLGG- 212 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC----------------ceEeeecCCccccCchhhcC-
Confidence 9999999999999999999654 47999999999876431 12356799999999999997
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+..+||||+||++|.|++ ||...........+......++ +.|...+..++++|++||..||.+|+|+.++|+
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 579999999999999999985 9999888888887777666654 578888999999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|||....
T Consensus 293 HpWi~~~ 299 (382)
T KOG0032|consen 293 HPWIKSI 299 (382)
T ss_pred CccccCC
Confidence 9997764
No 75
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8.2e-38 Score=369.64 Aligned_cols=272 Identities=25% Similarity=0.419 Sum_probs=212.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+++++||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++|||||+++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--------- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--------- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe---------
Confidence 58999999999999999999999999999999875432 22344678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|+|||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 589999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCC-----------CCCCC---------------------CCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA-----------AFPTD---------------------TGGV 587 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~-----------~~~~~---------------------~~~~ 587 (1196)
|+||||||+|||++.++++||+|||+|+.+......... .+... ....
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ 201 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 999999999999999999999999998643211000000 00000 0000
Q ss_pred cccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHH
Q 000993 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQE 663 (1196)
Q Consensus 588 ~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~ 663 (1196)
.....+.+||+.|+|||++.+ ..|+.++|||||||+||||++ ||......+............ .+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 280 (382)
T cd05625 202 RCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280 (382)
T ss_pred cccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHH
Confidence 001134579999999999987 568999999999999999997 887666555544444322221 223345678999
Q ss_pred HHHHHcccCCCCCCCC---HHHHHhccCCCCchHH
Q 000993 664 SLLRRLMSPSPSDRPS---ATELLQDALPPQMEYE 695 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~~~~ 695 (1196)
++|.+|+ .+|.+|++ +.++++|+||....+.
T Consensus 281 ~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 281 DLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 9999976 59999997 9999999999987654
No 76
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=2.5e-37 Score=382.98 Aligned_cols=350 Identities=13% Similarity=0.117 Sum_probs=271.5
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
..+.|++||+|.++.+++.|++.++++|++|||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|++
T Consensus 193 ~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP~~~~~ 272 (575)
T PRK12305 193 EIGPGLPVWHPKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKPMNCPG 272 (575)
T ss_pred ccCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEecCCCHH
Confidence 35889999999999999999999999999999999999999 332 345577899999999999999999988888
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
++|+++++. ..|+|+||+|+|||+|+++ .|.+||+|+|+|+||..++.+| +|+|.++.++|+.||+++
T Consensus 273 ~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~~~~~~e~~e~i~l~~~~~~~lgl~~- 351 (575)
T PRK12305 273 HILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTPDQIEDEILKVLDFVLELLKDFGFKD- 351 (575)
T ss_pred HHHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 899998743 3599999999999999875 2556799999999999888888 999999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.||++.+ +.+ +|..+.|... .+.+..
T Consensus 352 ~~i~l~~r~~-~~~---~g~~~~~~~~---------------------------------------~~~l~~-------- 380 (575)
T PRK12305 352 YYLELSTREP-EKY---VGDDEVWEKA---------------------------------------TEALRE-------- 380 (575)
T ss_pred EEEEEeCCCh-hhc---cCCHHHHHHH---------------------------------------HHHHHH--------
Confidence 9999999765 221 2322211000 000000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecC-CCCcccccccccc----cc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVK-EKYPATLVEGTLL----AV 1036 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~-~~~~~~~~~~~~I----~~ 1036 (1196)
.+...|+. ...+.+ +.+||. ..|++...+ .+. .-+.+++ ..
T Consensus 381 -------------------------~l~~~g~~--~~~~~~---~~~~y~-~~~~~~~~d~~g~---~~~~~t~~~~~~~ 426 (575)
T PRK12305 381 -------------------------ALEELGLE--YVEDPG---GAAFYG-PKIDVQIKDALGR---EWQMSTIQLDFNL 426 (575)
T ss_pred -------------------------HHHhcCCC--cEecCC---Cccccc-ccEEEEeeccCCC---ceeccceeeeccc
Confidence 11222332 234555 778885 557774432 222 1111233 35
Q ss_pred ccccch-hhhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHH
Q 000993 1037 GGRYDY-LLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1109 (1196)
Q Consensus 1037 GGRYD~-L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1109 (1196)
++|||- ++. ..|. ...|++ |++-++|||+.+|.+ +..+.+ .++.+|+|++.+ ++...+|.+
T Consensus 427 ~~~fdl~y~~---------~~~~-~~~p~~ih~~~~G~~eRl~~~l~e~~~~~~p~~-~~p~~v~Ii~~~-~~~~~~a~~ 494 (575)
T PRK12305 427 PERFDLEYTA---------EDGK-RQRPVMIHRALFGSIERFIGILTEHYAGAFPFW-LAPVQVVIIPVA-DAHNEYAEE 494 (575)
T ss_pred HhhCCCEEEC---------CCCC-ccCceEEEccccccHHHHHHHHHHHhCCCCCCC-CCCccEEEEEeC-hHHHHHHHH
Confidence 689994 422 2222 235878 777789999999863 222322 457789999996 677889999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++++||++|++|++++. +.++++++++|++.|+|++|++|++|.++|+|+||||.+++|..++++++++.|++.+++
T Consensus 495 i~~~Lr~~gi~v~~d~~-~~~l~kk~~~A~~~g~p~~iivG~~E~~~~~v~vr~~~~~~q~~v~~~~l~~~l~~~~~~ 571 (575)
T PRK12305 495 VAKKLRAAGIRVEVDTS-NERLNKKIRNAQKQKIPYMLVVGDKEVEAGTVSVRTRDGEQLNGMPLDEFIELIKEKIAE 571 (575)
T ss_pred HHHHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEechhhhCCEEEEEEcCCCceeeeeHHHHHHHHHHHHhc
Confidence 99999999999998877 678999999999999999999999999999999999999999999999999999888775
No 77
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-37 Score=364.10 Aligned_cols=260 Identities=29% Similarity=0.423 Sum_probs=204.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 468999999999999999999999999999999999755444455667889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+||||++++|.+.+.. .+++..+..++.||+.||+|||++
T Consensus 94 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 94 -----------------------------SLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred -----------------------------CccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346799999999988887743 488999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 205 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 205 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence 9999999999999999999999999999753211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHh----------------------hhcCCCC--------Ccc---------c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELP--------PSW---------V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l----------------------~~~~~~p--------~~~---------~ 656 (1196)
|||||++|+|++ ||............. ......+ +.| .
T Consensus 206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
T cd07876 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285 (359)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence 999999999996 776443221111100 0011110 000 1
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
..++.+++||.+||+.||.+|||+.++|+|||+..
T Consensus 286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 12357899999999999999999999999999874
No 78
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-37 Score=369.54 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=200.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
...+|++++.||+|+||.||+|++..+++.||+|+.. ...+.+|+.+|+.++|||||+++++|..
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~------- 154 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY------- 154 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-------
Confidence 3468999999999999999999999999999999643 2346789999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+++||++.++|..++.....+++..++.++.||+.||+|||++
T Consensus 155 ---------------------------------~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 155 ---------------------------------NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN 201 (391)
T ss_pred ---------------------------------CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34679999999999999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+|+...... .......+||+.|+|||++.+ ..++.++||
T Consensus 202 ~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 266 (391)
T PHA03212 202 RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------ANKYYGWAGTIATNAPELLAR-DPYGPAVDI 266 (391)
T ss_pred CcccCCCChHhEEEcCCCCEEEEeCCccccccccc--------------ccccccccCccCCCChhhhcC-CCCCcHHHH
Confidence 99999999999999999999999999997532110 001234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhH-------HHHHHHHHhhhc--------------------------CCCC---Ccc---c
Q 000993 619 YSLGIVFFELWH---PFSTAM-------ERQIVLSDLKQK--------------------------GELP---PSW---V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~-------~~~~~~~~l~~~--------------------------~~~p---~~~---~ 656 (1196)
|||||++|||++ ||.... ........+... ...+ +.+ .
T Consensus 267 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (391)
T PHA03212 267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLY 346 (391)
T ss_pred HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHh
Confidence 999999999996 443211 000000000000 0001 111 1
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
..+.++.+||.+||+.||.+|||+.++|+|+||...
T Consensus 347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 233478899999999999999999999999999764
No 79
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.8e-38 Score=361.71 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=213.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--------- 71 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ--------- 71 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe---------
Confidence 479999999999999999999999999999999975432 2234456888999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 72 -------------------------------DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred -------------------------------cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456899999996 5999999876 679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-----WPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~~ 612 (1196)
+||+||||||+|||++.++.+||+|||++..+..... .......||+.|+|||++.. ...+
T Consensus 121 ~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (330)
T cd05601 121 MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186 (330)
T ss_pred CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------eeeecccCCccccCHHHhccccccccCCC
Confidence 9999999999999999999999999999976532110 01123478999999999873 2457
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|||++ ||.................. ..+.....++++.+||.+||+ +|.+|||+.++++|+|
T Consensus 187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 899999999999999997 88765554444333322211 112333467789999999998 9999999999999999
Q ss_pred CCCchHHHHHH
Q 000993 689 PPQMEYELLDN 699 (1196)
Q Consensus 689 ~~~~~~~~~~~ 699 (1196)
|....+..+..
T Consensus 266 ~~~~~~~~~~~ 276 (330)
T cd05601 266 FSKIDWNNIRN 276 (330)
T ss_pred cCCCCHHHHhh
Confidence 99987765543
No 80
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-37 Score=366.81 Aligned_cols=263 Identities=28% Similarity=0.383 Sum_probs=209.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.+..+|+.||||++...........++.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 73 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI------- 73 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc-------
Confidence 5788999999999999999999999999999986543343445678899999999999999999988732210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....+|+||||++++|.+.+.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 74 ----------------------------DPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred ----------------------------cccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 0123679999999999999998888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+...++.++|||||
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 191 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCc--------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhH
Confidence 99999999999999999999999997542111 0112334689999999999875668999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHh----------------------hhcCCCCCc-------cccCCHHHHHHHHHc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELPPS-------WVAKFSEQESLLRRL 669 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l----------------------~~~~~~p~~-------~~~~~~~l~~LI~~c 669 (1196)
||++|||++ ||...........+. ......++. ....++++.+||.+|
T Consensus 192 G~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 271 (372)
T cd07853 192 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271 (372)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHh
Confidence 999999996 776544332221111 111111111 122456889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||.+|||+.++++|+|+....
T Consensus 272 L~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 272 LVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999999998754
No 81
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.4e-38 Score=369.69 Aligned_cols=275 Identities=24% Similarity=0.402 Sum_probs=213.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+|+.++||||+++++.|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ--------- 71 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE---------
Confidence 479999999999999999999999999999999864322 1123456889999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (376)
T cd05598 72 -------------------------------DKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120 (376)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc---------C--CCCCCCC-----------------CCcccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---------D--AAFPTDT-----------------GGVSVD 590 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~---------~--~~~~~~~-----------------~~~~~~ 590 (1196)
||+||||||+|||++.++.+||+|||+|..+....... . ....... ......
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCL 200 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999986432100000 0 0000000 000011
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLL 666 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI 666 (1196)
....+||+.|||||++.+ ..++.++|||||||++|||++ ||......+............ .+.....++++.++|
T Consensus 201 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 279 (376)
T cd05598 201 AHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLI 279 (376)
T ss_pred ccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHH
Confidence 234589999999999987 568999999999999999997 887666554433333222221 223345678899999
Q ss_pred HHcccCCCCCCC---CHHHHHhccCCCCchHHHH
Q 000993 667 RRLMSPSPSDRP---SATELLQDALPPQMEYELL 697 (1196)
Q Consensus 667 ~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~ 697 (1196)
.+|+ .+|.+|+ ++.++++|+||.+..+...
T Consensus 280 ~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 9976 5999999 9999999999999876544
No 82
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-37 Score=375.34 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=201.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|||||+++++|.....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~------ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECF------ 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccc------
Confidence 57999999999999999999999999999999885321 224579999999999999999987643210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.......++++|||||+++|.+++. ....+++..++.++.||+.||+|||
T Consensus 134 --------------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 134 --------------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred --------------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0012235688999999998887765 3456999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+|+.+.... ......||+.|+|||++.+...|+.+
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 251 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------RSVSYICSRFYRAPELMLGATNYTTH 251 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC----------------CcccCCCCcCccCHHHhcCCCCCCcH
Confidence 99999999999999999765 69999999998653211 12345789999999998875578999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQESLL 666 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~~l~~LI 666 (1196)
+|||||||+||||++ ||......+....++...+ .+|. . ....++++.+||
T Consensus 252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li 331 (440)
T PTZ00036 252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFI 331 (440)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHH
Confidence 999999999999997 7765544333332221110 0110 0 112456899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||+.||.+|||+.++|+||||...
T Consensus 332 ~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 332 SQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHCCCChhHCcCHHHHhCChhHHhh
Confidence 99999999999999999999998754
No 83
>PRK12444 threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=2.6e-37 Score=386.11 Aligned_cols=352 Identities=13% Similarity=0.088 Sum_probs=278.7
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
++...|+++|+|.+..+++.|++.+++.+.++||++|.||+| ++. ++.+.+.++|| |.|.+|+.++|||+.|+
T Consensus 260 ~~~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~ 338 (639)
T PRK12444 260 SEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCP 338 (639)
T ss_pred ccccCcceEEeeCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCH
Confidence 345789999999999999999999999999999999999999 332 33567789999 88999999999999999
Q ss_pred HHHHHHHhC----CCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCC
Q 000993 812 PFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 812 ~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~ 879 (1196)
+++|+++.. +..|+|+||+|+|||+|+++ + |.++|+|.|+|+||..+. +++| ++.++.++++.||+.
T Consensus 339 ~~~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~-~~~e~~~~~~~~~~i~~~lgl~ 417 (639)
T PRK12444 339 GHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQ-IEDEIKSVMAQIDYVYKTFGFE 417 (639)
T ss_pred HHHHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 999998653 23599999999999999976 3 556799999999998766 6665 999999999999993
Q ss_pred CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Q 000993 880 ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959 (1196)
Q Consensus 880 ~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~ 959 (1196)
+.+.++++. -+.+|-++.|.... ..+..
T Consensus 418 --~~~~~~~r~-----~~~~G~~e~~~~~~---------------------------------------~~l~~------ 445 (639)
T PRK12444 418 --YEVELSTRP-----EDSMGDDELWEQAE---------------------------------------ASLEN------ 445 (639)
T ss_pred --EEEEEECCc-----cccCCCHHHHHHHH---------------------------------------HHHHH------
Confidence 999998852 12344433221100 00101
Q ss_pred CChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccc
Q 000993 960 GAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1039 (1196)
Q Consensus 960 g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGR 1039 (1196)
.|...|+ .+.+|.+ ||. || |++|++...... .+..+|+|||
T Consensus 446 ---------------------------~l~~~~~--~y~~~~~--~ga-~Y-~~~~e~~~~~~~------~~~~~~~t~~ 486 (639)
T PRK12444 446 ---------------------------VLQSLNY--KYRLNEG--DGA-FY-GPKIDFHIKDAL------NRSHQCGTIQ 486 (639)
T ss_pred ---------------------------HHHHcCC--CceeccC--Ccc-cc-cceEEEEeecCC------CChhccccee
Confidence 1233344 3567877 888 99 999999876532 2347999999
Q ss_pred cch-hhhhccccccccccCCCCCCCcce---ecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCC-chHHHHHHHH
Q 000993 1040 YDY-LLHRMWDREYVGYASRTNPPSGVG---ASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGG-GLLVERMELV 1111 (1196)
Q Consensus 1040 YD~-L~~~fg~~~~~~~~g~~~~~pAvG---faiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a 1111 (1196)
||. |-++|+-. +....|. ...|++| |+.++|||+.+|.+ +..+. ..++.+|+|++.+ + ....+|++++
T Consensus 487 ~d~~~~~~f~l~-~~~~~g~-~~~P~i~~~~~~g~ieRli~~L~e~~~~~~p~-~~ap~qV~Ii~~~-~~~~~~~a~~la 562 (639)
T PRK12444 487 LDFQMPEKFDLN-YIDEKNE-KRRPVVIHRAVLGSLDRFLAILIEHFGGAFPA-WLAPVQVKVIPVS-NAVHVQYADEVA 562 (639)
T ss_pred eecccccccceE-EECCCCC-ccccEEEEECCCCCHHHHHHHHHHhcCCCCCC-ccCCceEEEEEcc-cHHHHHHHHHHH
Confidence 998 33444321 1223332 3479999 88899999988842 22222 2468899999986 5 4778999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1112 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1112 ~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||+|.+++|..++++++++.+++.+++
T Consensus 563 ~~LR~~Gi~veid~~-~~sl~kq~k~A~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~ 637 (639)
T PRK12444 563 DKLAQAGIRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKN 637 (639)
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhc
Confidence 999999999998876 679999999999999999999999999999999999999999999999999999888764
No 84
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.3e-37 Score=364.96 Aligned_cols=275 Identities=26% Similarity=0.420 Sum_probs=215.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+++.||||+++.... .......+.+|+.++..++||||++++++|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------- 71 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------- 71 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 479999999999999999999999999999999974321 2234567888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ |+|.+++.+...+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 120 (360)
T cd05627 72 -------------------------------DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL 120 (360)
T ss_pred -------------------------------cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC----CC-C-------C--------CCCccccCcCccccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA----FP-T-------D--------TGGVSVDGTGQVGTY 598 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~----~~-~-------~--------~~~~~~~~~~~~GT~ 598 (1196)
||+||||||+|||++.++++||+|||+++.+.......... .+ . . .........+.+||+
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 200 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTP 200 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCc
Confidence 99999999999999999999999999997653211000000 00 0 0 000000123458999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||................ ..+|+ ....++++++||.+|+ .|
T Consensus 201 ~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TD 277 (360)
T ss_pred cccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cC
Confidence 9999999987 568999999999999999997 887666555444443322 12232 2235678999999977 49
Q ss_pred CCCCC---CHHHHHhccCCCCchHHHHH
Q 000993 674 PSDRP---SATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 674 P~~RP---ta~eiL~~~~~~~~~~~~~~ 698 (1196)
|.+|+ ++.++++||||.+..+..+.
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 305 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEGVDWGHIR 305 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCCCCHHHHh
Confidence 99998 48999999999999887553
No 85
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-37 Score=358.52 Aligned_cols=257 Identities=26% Similarity=0.384 Sum_probs=210.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCC-CeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~Hp-nIV~l~~~~~e~~~~~~~~ 459 (1196)
+|++++.||+|+||.||+|+++.+++.||||++..... .....+.+..|..+++.++|+ +|+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--------- 71 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE---------
Confidence 58999999999999999999999999999999875321 223345688899999999765 5777877763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 72 -------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2356899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---------------KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------CceeeecCCccccChhhhcC-CCCCcccch
Confidence 99999999999999999999999999986421110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~~ 690 (1196)
|||||++|||++ ||......+...........+| ...++++.+++++||..||.+|++. .++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~ 261 (324)
T cd05587 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP---KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261 (324)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence 999999999996 8876665555544444333333 2456789999999999999999976 8999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (324)
T cd05587 262 RIDWEKL 268 (324)
T ss_pred CCCHHHH
Confidence 9876544
No 86
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-37 Score=359.76 Aligned_cols=252 Identities=26% Similarity=0.404 Sum_probs=206.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..++..+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~------------- 67 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT------------- 67 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------------
Confidence 369999999999999999999999999874321 223345677888888876 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 68 ---------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred ---------------------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 456899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGV 184 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------CcccccccCccccCHHHHcC-CCCCCccchhhhHH
Confidence 999999999999999999999987421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH------HHHHhccCCCCchH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQDALPPQMEY 694 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta------~eiL~~~~~~~~~~ 694 (1196)
++|||++ ||......+............|. ..++++.++|++||+.||.+||++ +++++|+||....+
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 185 LLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999996 88766655554444432222232 356789999999999999999998 99999999998876
Q ss_pred HHH
Q 000993 695 ELL 697 (1196)
Q Consensus 695 ~~~ 697 (1196)
..+
T Consensus 262 ~~~ 264 (320)
T cd05590 262 EKL 264 (320)
T ss_pred HHH
Confidence 543
No 87
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.6e-37 Score=357.11 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=206.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|+++.+|..||+|++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--------
Confidence 478999999999999999999999999999999987542 33445679999999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.|++.||.|||+.
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 75 --------------------------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred --------------------------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 346899999997 49999998888899999999999999999999986
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|+||||||+|||++.++.+||+|||+++..... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 184 (331)
T cd06649 123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (331)
T ss_pred CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----------------ccccCCCCcCcCCHhHhcC-CCCCchHh
Confidence 6999999999999999999999999998754211 1133578999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhh---------------------------------------------hcC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLK---------------------------------------------QKG 649 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~---------------------------------------------~~~ 649 (1196)
||||||++|||++ ||......+... .+. ...
T Consensus 185 iwslG~il~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd06649 185 IWSMGLSLVELAIGRYPIPPPDAKELEA-IFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE 263 (331)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHH-HhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence 9999999999996 775433322111 000 000
Q ss_pred CCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 650 ELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 650 ~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+. .....++++++||++||+.||++|||+.++++|+|+....
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0111 1113457899999999999999999999999999987653
No 88
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.6e-37 Score=348.46 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=198.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||+||+|+++.+|+.||+|.++...........+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~----- 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR----- 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc-----
Confidence 48899999999999999999999999999999876443333334566777777665 7999999998874311
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......++++|||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 76 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 76 ------------------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ------------------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124568999999999999988764 34899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM----------------ALTPVVVTLWYRAPEVLLQ-STYATPV 188 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcc----------------cCCCccccccccCchHhhC-CCCCCcc
Confidence 9999999999999999999999999999997643111 1123468999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC----------------CCC--------CccccCCHHHHHHHHHc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELP--------PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p--------~~~~~~~~~l~~LI~~c 669 (1196)
|||||||++|+|++ ||..........+...... ... ......+..+.+||.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 99999999999996 5554433322222111000 000 01123445678999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 89
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.6e-37 Score=356.98 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=211.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|++.+.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||+|+++++++.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe---------
Confidence 58899999999999999999999999999999975432 222334567788888877 5888999988763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 120 (323)
T cd05616 72 -------------------------------TMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---------------CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987432110 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|||++ ||..................+|. ..++++.+++++||+.||.+|++ ..++++|+||.
T Consensus 185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 999999999996 88766665555544443333333 45678999999999999999997 58999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (323)
T cd05616 262 YIDWEKL 268 (323)
T ss_pred CCCHHHH
Confidence 8876644
No 90
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.3e-37 Score=353.43 Aligned_cols=258 Identities=25% Similarity=0.401 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||+|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT-------- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--------
Confidence 47899999999999999999999999999999998754322 223457789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 76 --------------------------------DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999888654 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 188 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------cccccccccccccCCHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 011234679999999998775668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+......... ...+. .....++++.+||++
T Consensus 189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 999999999997 675543332222111100 00110 112345688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++++|+||....
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998654
No 91
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=365.64 Aligned_cols=256 Identities=26% Similarity=0.387 Sum_probs=214.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+-|+++..||.|+||+||+|.++.++-..|.|+|.. .+.+..++++-|+.+|+.++||+||+++++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------- 100 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------- 100 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc---------
Confidence 468899999999999999999999999999999864 445667889999999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+||..|||+| ....++- -...+++.++..+++|++.||.|||++
T Consensus 101 -------------------------------enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~ 149 (1187)
T KOG0579|consen 101 -------------------------------ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ 149 (1187)
T ss_pred -------------------------------cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence 4578999999986 4555444 456799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
+|||||||..|||++-+|.++|+|||.+....... -...++.|||+|||||++.. ...|+.
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDy 214 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDY 214 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecccccccchhHH---------------hhhccccCCcccccchheeeccccCCCchh
Confidence 99999999999999999999999999987543211 12356799999999998753 245999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||+|.||.. |.....++-+.+++....+...-.+...+..+.+++++||.+||..||++.++|+|||+.+
T Consensus 215 kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 215 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 9999999999999985 6777777777777766554432233445568999999999999999999999999999986
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 295 ~~ 296 (1187)
T KOG0579|consen 295 AP 296 (1187)
T ss_pred CC
Confidence 54
No 92
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.6e-37 Score=361.60 Aligned_cols=261 Identities=28% Similarity=0.381 Sum_probs=205.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 458999999999999999999999999999999998765445455677889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|++||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 90 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 90 -----------------------------SLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred -----------------------------cccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887753 488999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 201 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 201 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------CC-----CCC------------ccc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE-----LPP------------SWV 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------~~-----~p~------------~~~ 656 (1196)
|||||++|+|++ ||............+... .. .+. ...
T Consensus 202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T cd07874 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281 (355)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence 999999999996 776443222211111100 00 000 001
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
....++++||.+||+.||.+|||+.++|+|||+...
T Consensus 282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 123467899999999999999999999999999744
No 93
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2e-37 Score=357.67 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=207.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~------------- 67 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT------------- 67 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999875321 223345677889888866 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 120 (321)
T cd05591 68 ---------------------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120 (321)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 356899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNG---------------VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGV 184 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCC---------------ccccccccCccccCHHHHcC-CCCCCccceechhH
Confidence 999999999999999999999987432111 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-------CHHHHHhccCCCCch
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-------SATELLQDALPPQME 693 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-------ta~eiL~~~~~~~~~ 693 (1196)
++|||++ ||...................|. ..++++.++|++||+.||.+|| ++.++++|+||....
T Consensus 185 il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 185 LMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 9999996 88766665555444433322332 3457899999999999999999 999999999999887
Q ss_pred HHHH
Q 000993 694 YELL 697 (1196)
Q Consensus 694 ~~~~ 697 (1196)
+..+
T Consensus 262 ~~~~ 265 (321)
T cd05591 262 WVLL 265 (321)
T ss_pred HHHH
Confidence 7644
No 94
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-37 Score=364.40 Aligned_cols=263 Identities=22% Similarity=0.386 Sum_probs=212.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------- 113 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------- 113 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 5799999999999999999999999999999999974321 2223345778999999999999999998773
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+..++|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589988765 468999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM--------------VRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc--------------ccCCCCCCCcCeECHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999975432110 1123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||++|||++ ||...........+....... .+.....+.++.+||++||+.+|.+ ||+++++++|+|
T Consensus 227 ~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 9999999999999996 887665554444443322221 1233346789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|.+..+...
T Consensus 307 ~~~~~~~~~ 315 (370)
T cd05596 307 FKNDQWTFD 315 (370)
T ss_pred cCCCChhhH
Confidence 998766533
No 95
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.5e-37 Score=356.98 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=206.6
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 5899999999999999999874 4789999999874321 222345688899999999 5999999998763
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 120 (332)
T cd05614 76 -----------------------------------TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEH 120 (332)
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2456899999997 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... .......+||+.|||||++.+...++.
T Consensus 121 lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 186 (332)
T cd05614 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--------------KERTYSFCGTIEYMAPEIIRGKGGHGK 186 (332)
T ss_pred HHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------CCccccccCCccccCHHHhcCCCCCCC
Confidence 999999999999999999999999999999997542211 011234579999999999987555889
Q ss_pred cchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 682 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~e 682 (1196)
++|||||||++|||++ ||.... ............ ++.....++.+.++|.+||+.||.+|| ++++
T Consensus 187 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 187 AVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD---PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 9999999999999997 775321 112222222212 222234567899999999999999999 8899
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
+++|+|+....+...
T Consensus 264 ~l~h~~~~~~~~~~~ 278 (332)
T cd05614 264 IKEHPFFKGLDWEAL 278 (332)
T ss_pred HHcCCCcCCCCHHHH
Confidence 999999998765543
No 96
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.1e-37 Score=360.45 Aligned_cols=252 Identities=27% Similarity=0.372 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------------- 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------------- 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--------------
Confidence 369999999999999999999999999975322 22334567889999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||+ +||+||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 457899999997 5899988888889999999999999999999998 799999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGV 184 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCC---------------cccccccCCcccCCHHHHcc-CCCCCccccccccc
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~ 695 (1196)
++|||++ ||..................+|. ..++++.+||++||+.||.+|+ ++.++++|+||.+..+.
T Consensus 185 il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 185 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 77665554444333333333332 3567899999999999999997 99999999999987765
Q ss_pred HH
Q 000993 696 LL 697 (1196)
Q Consensus 696 ~~ 697 (1196)
..
T Consensus 262 ~~ 263 (325)
T cd05594 262 DV 263 (325)
T ss_pred HH
Confidence 33
No 97
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.6e-37 Score=361.74 Aligned_cols=260 Identities=28% Similarity=0.386 Sum_probs=206.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----- 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc-----
Confidence 358999999999999999999999999999999998755444455667889999999999999999998763211
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 97 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 97 -----------------------------SLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred -----------------------------cccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC
Confidence 0112356899999999999888753 488899999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 208 (364)
T cd07875 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 208 (364)
T ss_pred CeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-------------------C--------------------Cccc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------------------P--------------------PSWV 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-------------------p--------------------~~~~ 656 (1196)
|||||++|||++ ||............+...+.. | ....
T Consensus 209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (364)
T cd07875 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288 (364)
T ss_pred HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence 999999999997 776544433322222110000 0 0000
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.....+++||.+||+.||.+|||+.++|+|||+..
T Consensus 289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 12346789999999999999999999999999864
No 98
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=340.63 Aligned_cols=288 Identities=25% Similarity=0.379 Sum_probs=237.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|+.+++||+|.||+|.+|+.+.+|+.||||++++.-. .......-+.|-++|...+||.+..+.-.|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF------- 237 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF------- 237 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-------
Confidence 357899999999999999999999999999999999875432 223345567799999999999998776444
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+....+|+||||+. |.|.-+|++...|+++.++.+-.+|++||.||
T Consensus 238 ---------------------------------Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YL 284 (516)
T KOG0690|consen 238 ---------------------------------QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYL 284 (516)
T ss_pred ---------------------------------ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhh
Confidence 34678999999996 58999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++||+||||.+|+|+|.+|++||+|||+++.-- . ....+.++||||.|+|||++.. ..|+.+
T Consensus 285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I----~-----------~g~t~kTFCGTPEYLAPEVleD-nDYgra 348 (516)
T KOG0690|consen 285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI----K-----------YGDTTKTFCGTPEYLAPEVLED-NDYGRA 348 (516)
T ss_pred hhCCeeeeechhhhheeccCCceEeeecccchhcc----c-----------ccceeccccCChhhcCchhhcc-ccccce
Confidence 99999999999999999999999999999997421 0 1124577899999999999998 689999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|+|.+||++|||++ ||+..+......-++.....+|. ..+++++.|+..+|.+||.+|. .+.+|.+|.
T Consensus 349 VDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 349 VDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred eehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 999999999999997 99887776666555555555554 4567999999999999999997 489999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCCcchhhhccccccchhh
Q 000993 688 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETL 726 (1196)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ 726 (1196)
||..+.|+.+ +...+.++.....-+......||++-.
T Consensus 426 FF~~v~W~~~--~~Kki~PPfKPqVtSetDTryFD~EFT 462 (516)
T KOG0690|consen 426 FFASVDWEAT--YRKKIEPPFKPQVTSETDTRYFDEEFT 462 (516)
T ss_pred hhccCCHHHH--HHhccCCCCCCCcccccchhhhhhhhh
Confidence 9999988744 445566655555555555556665543
No 99
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-37 Score=355.50 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=204.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHH---HhcCCCCeeeeeeeeeecCccccC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATL---SRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL---~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
|++++.||+|+||.||+|.++.+|+.||||+++.... .....+.+.+|+.++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 6789999999999999999999999999999975431 222345566776655 56689999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|...+.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 74 ---------------------------------EDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999975 78777654 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|||||++.+ ..++.++|
T Consensus 120 ~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (324)
T cd05589 120 NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---------------DRTSTFCGTPEFLAPEVLTE-TSYTRAVD 183 (324)
T ss_pred CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---------------CcccccccCccccCHhHhcC-CCCCcccc
Confidence 999999999999999999999999999986421110 11234679999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||++|||++ ||......+............|. ..++.+.++|++||+.||.+|| ++.++++|+||
T Consensus 184 iwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 184 WWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 9999999999996 88766555544444433333333 3467899999999999999999 79999999999
Q ss_pred CCchHHH
Q 000993 690 PQMEYEL 696 (1196)
Q Consensus 690 ~~~~~~~ 696 (1196)
....+..
T Consensus 261 ~~~~~~~ 267 (324)
T cd05589 261 RDINWDD 267 (324)
T ss_pred CCCCHHH
Confidence 9876553
No 100
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-37 Score=360.43 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=205.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||++++++|.....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 88 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS----- 88 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc-----
Confidence 368999999999999999999999999999999987544333445668899999999999999999987632210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|++++++|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 89 -----------------------------IENFNEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred -----------------------------ccccCcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999999988775 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++.... .....+||+.|+|||++.+...++.++|||
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 200 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCC------------------CcCCccccccccCchHhcCCccCCchhhhH
Confidence 99999999999999999999999999975421 123457899999999998755689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||................+ ..+. .+....+.+.+||.+
T Consensus 201 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 99999999996 6754332222211111000 0110 112334567899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||..||.+|||+.++++|+||.+.
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhcc
Confidence 999999999999999999999764
No 101
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-38 Score=347.00 Aligned_cols=255 Identities=28% Similarity=0.419 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+..+++|.|+||.||+|....+++.||||+.-.... --.+|+++|+.++|||||++..+|..+..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~------- 91 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTE------- 91 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCC-------
Confidence 57788999999999999999999999999998753221 23479999999999999999988854310
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+..++.+||||+|.+|.++++. ..+++.-.++-+..||++||+|||+
T Consensus 92 ----------------------------~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 92 ----------------------------SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred ----------------------------CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 12457789999999999999975 4678888999999999999999999
Q ss_pred CCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
.||+||||||+|+|+|.+ |.+||||||.|+.+..++ ...++.-|..|.|||.+.|...|+.+.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e----------------pniSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE----------------PNISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC----------------CceeEEEeccccCHHHHcCccccCcee
Confidence 999999999999999987 899999999999875433 124567899999999999988999999
Q ss_pred hhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhh------------c-----CCCC----C-----ccccCCHHHHHHHH
Q 000993 617 DMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQ------------K-----GELP----P-----SWVAKFSEQESLLR 667 (1196)
Q Consensus 617 DVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~------------~-----~~~p----~-----~~~~~~~~l~~LI~ 667 (1196)
||||.||++.||+. | |.+.+.......++.. + ...| . ......+++.+|+.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 99999999999995 4 3333332222211110 0 0111 1 11234578999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++|..+|.+|.++.++++|+||....
T Consensus 288 ~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhccChhhcCCHHHHhcchhhHHhh
Confidence 99999999999999999999987653
No 102
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.8e-37 Score=355.68 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=204.6
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 387 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.||+|+||.||+|++. .+++.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~---------- 71 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT---------- 71 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----------
Confidence 67999999999999874 4688999999875321 22234567889999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++ ++|.+++...+.+.+..++.++.||+.||+|||++||
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 72 ------------------------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ------------------------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346899999997 4999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 185 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWS 185 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------CcccccCCCccccChhhccC-CCCCCcceecc
Confidence 999999999999999999999999987432110 01233579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||..................+|+ ..++.+.+||++||+.||.+|| ++.++++|+||...
T Consensus 186 lG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 186 LGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred cHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999997 78766555544444443333333 3467899999999999999999 89999999999887
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
.+.
T Consensus 263 ~~~ 265 (323)
T cd05584 263 NWD 265 (323)
T ss_pred CHH
Confidence 654
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.1e-37 Score=362.23 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=209.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-------- 113 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 3789999999999999999999999999999999864322 2223456788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5899988654 68999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++.+||+|||+|+...... .......+||+.|||||++.+.+ .++.
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------ceecccCCCCcccCCHHHHhccCCCCCCCc
Confidence 999999999999999999999999999997643211 01123457999999999987632 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||+||||++ ||...........+....... .+.....+..++++|.+||..+|.+ |+++.++++|||
T Consensus 227 ~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 227 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 9999999999999996 887666555444444322222 1223345778999999999866644 899999999999
Q ss_pred CCCchHH
Q 000993 689 PPQMEYE 695 (1196)
Q Consensus 689 ~~~~~~~ 695 (1196)
|....+.
T Consensus 307 ~~~~~~~ 313 (370)
T cd05621 307 FKNDQWN 313 (370)
T ss_pred cCCCCcC
Confidence 9886543
No 104
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.9e-37 Score=354.52 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=203.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+..|..++..+ +||||++++++|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------------- 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE--------------
Confidence 469999999999999999999999999975321 112344567788888754 8999999998873
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...++|+|||||+ ++|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 67 --------------------------TKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred --------------------------eCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2457899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGD---------------NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCC---------------CceeccCCCcCccCHHHHcC-CCCCcccchhhhHH
Confidence 999999999999999999999986421100 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-HHHHhccCCCCchHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 697 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-~eiL~~~~~~~~~~~~~ 697 (1196)
++|||++ ||......+............| ...++++++||++||+.||.+||++ +++++|+||....+...
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~~ 259 (316)
T cd05620 185 LLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHHH
Confidence 9999996 8876655544433332222222 2356789999999999999999997 58889999999876644
No 105
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.3e-37 Score=354.21 Aligned_cols=253 Identities=27% Similarity=0.419 Sum_probs=202.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-------------- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------------
Confidence 369999999999999999999999999975321 112334556677777654 8999999998762
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 67 --------------------------TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred --------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2457899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGE---------------GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCC---------------CccccccCCccccCHHHHcC-CCCCCcccchhHHH
Confidence 999999999999999999999997532111 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-HHHHhccCCCCchHHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELLD 698 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-~eiL~~~~~~~~~~~~~~ 698 (1196)
++|||++ ||......+...........+| ...+.++.+||++||+.||.+||++ .++++|+|+....+..+.
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~ 260 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERLE 260 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHHH
Confidence 9999996 8876655554444333222222 3356689999999999999999986 588899999988766443
No 106
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=349.85 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=222.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++...=|.+.+.||+|.|..|.+|+|..+|..||||+|.+...+.-...++.+|+..|+.++|||||++|.+.
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi------- 86 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI------- 86 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-------
Confidence 4445668888999999999999999999999999999987766655567899999999999999999999774
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|+|+-+ |+|+++|.+. ..+.++.+.+|+.||+.|+.|
T Consensus 87 ---------------------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~Y 133 (864)
T KOG4717|consen 87 ---------------------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISY 133 (864)
T ss_pred ---------------------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 13567999999986 5999999765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
+|+.++|||||||+|+.+.+ -|-|||.|||++..+.... ..++.||+.+|.|||+|.|..+-.
T Consensus 134 CHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----------------kL~TsCGSLAYSAPEILLGDsYDA 197 (864)
T KOG4717|consen 134 CHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----------------KLTTSCGSLAYSAPEILLGDSYDA 197 (864)
T ss_pred HhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc----------------hhhcccchhhccCchhhhcCccCC
Confidence 99999999999999998765 4899999999997654332 235679999999999999965556
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+++||||||||||-|.+ ||....+.+..-.++..+...|.. .+.++++||..||..||.+|.+.++|..++|.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 89999999999999986 999888888777777766666654 455999999999999999999999999999998
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
...
T Consensus 275 ~~D 277 (864)
T KOG4717|consen 275 AGD 277 (864)
T ss_pred CCC
Confidence 764
No 107
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.2e-37 Score=355.54 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~------------- 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------------
Confidence 368999999999999999999999999975432 223345678899999988 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 68 ---------------------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------CccccccCCccccCHHHHcC-CCCCCccceechHH
Confidence 999999999999999999999986421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHh
Q 000993 624 VFFELWH---PFSTA--------MERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 685 (1196)
Q Consensus 624 iLyELlt---Pf~~~--------~~~~~~~~~l~-~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~ 685 (1196)
++|||++ ||... .........+. ....+| ...++++.++|++||+.||.+||+ +.++++
T Consensus 185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999996 77421 11111122222 122223 235678999999999999999987 799999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||....+...
T Consensus 262 hp~~~~~~~~~~ 273 (329)
T cd05588 262 HPFFRNIDWDLL 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999988876644
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.8e-37 Score=357.43 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=206.4
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||++++. .+|+.||+|++............+.+|+.+|++++||||++++++|..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 69 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT------------ 69 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc------------
Confidence 57999999999999873 578999999997543333344567889999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+|
T Consensus 70 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 70 ----------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred ----------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 456899999996 699999988888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++||||||
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG 185 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFG 185 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------CceecccCChhhcCHHHHcC-CCCCCccceeccc
Confidence 9999999999999999999999987532110 11234579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
|++|||++ ||..................+|. ..++.+.+||++||+.||.+||+ +.++++|+||....+
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 99999997 88766555544444433333333 34678999999999999999999 788999999998865
Q ss_pred HH
Q 000993 695 EL 696 (1196)
Q Consensus 695 ~~ 696 (1196)
..
T Consensus 263 ~~ 264 (318)
T cd05582 263 NK 264 (318)
T ss_pred HH
Confidence 53
No 109
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=359.84 Aligned_cols=238 Identities=27% Similarity=0.403 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+....++-||.|+-|.||+|+.+ ++.||||+++- .-..+++-|+.|+||||+.+.|+|.
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCt---------- 182 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCT---------- 182 (904)
T ss_pred HHhhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeec----------
Confidence 44455678999999999999987 89999997642 1123688899999999999999993
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..+.++||||||. |-|..+|+....++......|..+||.||.|||.+.
T Consensus 183 ------------------------------qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK 232 (904)
T KOG4721|consen 183 ------------------------------QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK 232 (904)
T ss_pred ------------------------------CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh
Confidence 2567899999997 799999999999999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|||||||+-||||..+..|||+|||.++...... +..+++||..|||||++.+ ...+.|+|||
T Consensus 233 IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S----------------TkMSFaGTVaWMAPEvIrn-ePcsEKVDIw 295 (904)
T KOG4721|consen 233 IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS----------------TKMSFAGTVAWMAPEVIRN-EPCSEKVDIW 295 (904)
T ss_pred HhhhccCCCceEeeccceEEeccccchHhhhhhh----------------hhhhhhhhHhhhCHHHhhc-CCccccccee
Confidence 9999999999999999999999999998654221 2356899999999999998 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
||||+||||+| ||.+-....+....-. +....+-+..++..++-||+.||+..|..||++.+||.|-
T Consensus 296 SfGVVLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 296 SFGVVLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred hhHHHHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 99999999997 8877665544332211 1112233345566888999999999999999999999983
No 110
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-36 Score=353.24 Aligned_cols=264 Identities=24% Similarity=0.417 Sum_probs=211.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+++++.+++.||||++..... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe---------
Confidence 479999999999999999999999999999999974321 2223456888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+||||++ ++|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred -------------------------------cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2457899999996 599999976 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||++..+..... ......+||+.|||||++.+ ...++
T Consensus 121 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05597 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------VQSNVAVGTPDYISPEILQAMEDGKGRYG 186 (331)
T ss_pred CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--------------ccccceeccccccCHHHHhhccccccCCC
Confidence 9999999999999999999999999999875432110 01123469999999999873 24578
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....+.... ..+++.....+..++++|++||+.++.+ ||++.++++|
T Consensus 187 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999999999999996 887655544444333322 2344444556789999999988765443 8899999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+....
T Consensus 267 p~~~~~~~~~~~ 278 (331)
T cd05597 267 PFFEGIDWDNIR 278 (331)
T ss_pred CCCCCCCHHHHh
Confidence 999988766543
No 111
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=6.2e-37 Score=355.71 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=195.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||+|+||.||+|.+. .+++.||||+++.. ........+.+|+.+|+.+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 68999999999999999999863 34578999998643 2333456789999999999 899999999887321
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...+|++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T cd05102 84 -------------------------------------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRA 126 (338)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhh
Confidence 235799999997 5999888642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEE
Q 000993 514 ------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551 (1196)
Q Consensus 514 ------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NIL 551 (1196)
.++++..+..++.||+.||+|||++||+||||||+|||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 127 MVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred hhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 23777888999999999999999999999999999999
Q ss_pred ecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-
Q 000993 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 630 (1196)
Q Consensus 552 ld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt- 630 (1196)
++.++.+||+|||+++.+..... ........+++.|+|||++.+ ..++.++|||||||+||||++
T Consensus 207 ~~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 207 LSENNVVKICDFGLARDIYKDPD-------------YVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred EcCCCcEEEeecccccccccCcc-------------hhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999986422110 011123356789999999987 568999999999999999984
Q ss_pred ---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 631 ---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 631 ---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||......+.....+. .+..+......++.+.+||.+||+.||.+|||+.++++
T Consensus 273 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 273 GASPYPGVQINEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCCCCccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7765443333333322 22223233456678999999999999999999999986
No 112
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.8e-37 Score=353.33 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~------------- 67 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT------------- 67 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 223345677899999888 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+.+.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 120 (318)
T cd05570 68 ---------------------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120 (318)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEcc
Confidence 456899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGv 184 (318)
T cd05570 121 DLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------VTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGV 184 (318)
T ss_pred CCCHHHeEECCCCcEEecccCCCeecCcCC---------------CcccceecCccccCHHHhcC-CCCCcchhhhhHHH
Confidence 999999999999999999999986421110 01233579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~~~~~~~ 695 (1196)
++|+|++ ||...................| ...+..+.+||++||..||.+||++ .++++|+|+....+.
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999996 8876555544444333333333 2356789999999999999999999 999999999988765
Q ss_pred HH
Q 000993 696 LL 697 (1196)
Q Consensus 696 ~~ 697 (1196)
..
T Consensus 262 ~~ 263 (318)
T cd05570 262 KL 263 (318)
T ss_pred HH
Confidence 43
No 113
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9.4e-37 Score=352.46 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=210.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|+..+.||+|+||.||+|+++.+|+.||||+++.... .......+..|..+++.+. ||+|+++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe---------
Confidence 47889999999999999999999999999999875321 2223456778999998885 567777887762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~ 120 (323)
T cd05615 72 -------------------------------TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---------------VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccccccccCCCC---------------ccccCccCCccccCHHHHcC-CCCCCccch
Confidence 99999999999999999999999999987432111 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|||++ ||...................|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~ 261 (323)
T cd05615 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR 261 (323)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence 999999999997 88776665555554443333333 34678999999999999999997 57999999999
Q ss_pred CchHHHHH
Q 000993 691 QMEYELLD 698 (1196)
Q Consensus 691 ~~~~~~~~ 698 (1196)
...+..+.
T Consensus 262 ~~~~~~~~ 269 (323)
T cd05615 262 RIDWDKLE 269 (323)
T ss_pred CCCHHHHh
Confidence 98776554
No 114
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=7.4e-37 Score=371.13 Aligned_cols=252 Identities=21% Similarity=0.284 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC------CeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ------HVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp------nIV~l~~~~~e~~ 453 (1196)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++|. +|++++++|..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-- 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-- 202 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc--
Confidence 368999999999999999999999999999999986422 2234456677777777554 57777766521
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++|+||++++++|.+++.+.+.+++..++.++.||+.||+
T Consensus 203 -------------------------------------~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 203 -------------------------------------ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred -------------------------------------CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 1346899999999999999988888999999999999999999
Q ss_pred HHHh-CCCcccCCCcCcEEecCCC----------------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 534 HIHG-QGIIHRDLTPNNIFFDARN----------------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 534 yLHs-~gIiHrDLKp~NILld~~~----------------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
|||+ .|||||||||+|||++.++ .+||+|||.+.... ...+..+|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~------------------~~~~~~~g 307 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER------------------HSRTAIVS 307 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc------------------cccccccC
Confidence 9998 5999999999999998765 49999999875321 11234689
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-----------------
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV----------------- 656 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~----------------- 656 (1196)
|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+.........+.+|..|.
T Consensus 308 t~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 308 TRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999999999988 579999999999999999997 77654443322211111111111110
Q ss_pred ----------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 ----------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ----------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
...+.+.+||.+||+.||.+|||++++|+||||.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 012356799999999999999999999999999864
No 115
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=334.03 Aligned_cols=340 Identities=19% Similarity=0.248 Sum_probs=286.2
Q ss_pred chhhccCCCC---CCCCccccccccccccccCCcccchhhhhHHHHHHHHHHhhcccCCCc--ccHHHHHHHHHhcCCCC
Q 000993 252 SLLQDHGSNN---DGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLT--DALPQIATELYNLGIFS 326 (1196)
Q Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~--~~~~~~~~~l~~l~~~~ 326 (1196)
++++...+.| .-|.+|+-- +-| -|+ ..|+|||+..++++++||++|.+| ++.+.+.+.|.+++...
T Consensus 85 kll~~kadvnavnehgntplhy-acf----wgy----dqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHY-ACF----WGY----DQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKH 155 (448)
T ss_pred HHHHHhcccchhhccCCCchhh-hhh----hcH----HHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHh
Confidence 4555555544 566677211 111 233 368999999999999999999999 44588888999999888
Q ss_pred ccc-cCcCCCCcccccchhhHHHhhhhccccccCCcCCCCCCCCCCCCCCCCcccCCceEEeeeccCCcEEEEEEEEccC
Q 000993 327 ERG-RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLD 405 (1196)
Q Consensus 327 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~ 405 (1196)
++. ++++++++.|.+ .++++++.+++..++..+.++.++.+|.+...|+.|+|+|+
T Consensus 156 gq~~nripfkdt~wkg---------------------tktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq-- 212 (448)
T KOG0195|consen 156 GQSPNRIPFKDTTWKG---------------------TKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ-- 212 (448)
T ss_pred CCCCCccccccccccc---------------------ccccccccccccccCcchhhhhhhhhhccCCCccccccccc--
Confidence 888 789999998887 56677888889999999999999999999999999999998
Q ss_pred CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCccccccccccccccccccc
Q 000993 406 GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485 (1196)
Q Consensus 406 g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 485 (1196)
|..+++|+++....+.+..++|..|...|+.+.||||++++++|
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac------------------------------------ 256 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC------------------------------------ 256 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc------------------------------------
Confidence 78899999999999888899999999999999999999999998
Q ss_pred ccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCcCcEEecCCCCeEE
Q 000993 486 QENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKI 560 (1196)
Q Consensus 486 ~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs~g--IiHrDLKp~NILld~~~~vKL 560 (1196)
+.++++.++.+||+ |+|+.+++.... ++..++.+++.+|++||+|||+.. |....|++..++||++.+++|
T Consensus 257 ----nsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 257 ----NSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred ----cCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 34678899999998 799999987654 788999999999999999999985 666789999999999998887
Q ss_pred eccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC--CCCcchhHHHHHHHHHhhc---CCchh
Q 000993 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTA 635 (1196)
Q Consensus 561 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~s~ksDVwSlGviLyELlt---Pf~~~ 635 (1196)
+ +...+++++..+....|.||+||.++..+. .-.++|||||+|+||||.| ||.+.
T Consensus 333 s--------------------mad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl 392 (448)
T KOG0195|consen 333 S--------------------MADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL 392 (448)
T ss_pred e--------------------cccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC
Confidence 5 112234556677788999999999998554 4578999999999999997 99999
Q ss_pred HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 636 MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 636 ~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
.+++..+++.. .+..+..++..++.+.+|+.-|++.||.+||.++.|+
T Consensus 393 spmecgmkial-eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 393 SPMECGMKIAL-EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred Cchhhhhhhhh-ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999998877 4444555566778999999999999999999998876
No 116
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.9e-37 Score=354.07 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~------------- 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------------
Confidence 369999999999999999999999999975432 223445677899888877 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 68 ---------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCC---------------CccccccCCccccCHHHHcC-CCCCCccceecccH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHH-hhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHh
Q 000993 624 VFFELWH---PFSTA--------MERQIVLSD-LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 685 (1196)
Q Consensus 624 iLyELlt---Pf~~~--------~~~~~~~~~-l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~ 685 (1196)
++|||++ ||... ......... ......+| ...+..+.+||++||+.||.+||+ +.++++
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77421 111111222 22222233 245678999999999999999998 589999
Q ss_pred ccCCCCchHHHHH
Q 000993 686 DALPPQMEYELLD 698 (1196)
Q Consensus 686 ~~~~~~~~~~~~~ 698 (1196)
|+||.+..+....
T Consensus 262 hp~f~~~~~~~~~ 274 (329)
T cd05618 262 HPFFRNVDWDLME 274 (329)
T ss_pred CCCCCCCCHHHHH
Confidence 9999998776443
No 117
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.9e-37 Score=354.67 Aligned_cols=251 Identities=26% Similarity=0.394 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~------------- 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------------
Confidence 369999999999999999999999999975322 1122344555554 5678999999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~ 120 (323)
T cd05575 68 ---------------------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120 (323)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 456899999997 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHS---------------KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGA 184 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCC---------------CccccccCChhhcChhhhcC-CCCCccccccccch
Confidence 999999999999999999999986421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............++ ..++.+.++|++||+.||.+||++ .++++|+||....+..
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~ 261 (323)
T cd05575 185 VLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP---NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDD 261 (323)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 9999997 88765555444444433333333 346789999999999999999987 6999999999876653
No 118
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.8e-37 Score=345.52 Aligned_cols=253 Identities=30% Similarity=0.493 Sum_probs=200.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|+++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH----------- 69 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-----------
Confidence 488899999999999999999999999999999765443334456788999999999999999997762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
+...+|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 70 -----------------------------SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred -----------------------------cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 2356899999999999888765 4679999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 185 (284)
T cd07839 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185 (284)
T ss_pred ecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------CCcCCCccccCCcChHHHhCCcccCcHHHHHH
Confidence 999999999999999999999999997543211 01123467899999999887556799999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhh------------------cCCCC---------CccccCCHHHHHHHHHcc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP---------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p---------~~~~~~~~~l~~LI~~cL 670 (1196)
|||++|||++ ||......+.....+.. ....+ ......+++++++|++||
T Consensus 186 lG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07839 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLL 265 (284)
T ss_pred HHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHh
Confidence 9999999996 54332221111111100 00000 011234568899999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||++++++|+||
T Consensus 266 ~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 266 VCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCChhhcCCHHHHhcCCCC
Confidence 9999999999999999997
No 119
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.6e-36 Score=342.46 Aligned_cols=253 Identities=29% Similarity=0.478 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|+++.+++.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ---------- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----------
Confidence 5889999999999999999999999999999987654443445678899999999999999999998732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 71 ------------------------------ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ------------------------------CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999998888643 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 185 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI 185 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---------------ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence 99999999999999999999999999997542111 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~~l~~LI~~c 669 (1196)
|||||++|+|++ ||................. .........++++.++|++|
T Consensus 186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (285)
T cd07861 186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM 265 (285)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence 999999999997 6654332222111111000 00011223567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 266 l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 266 LIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999997
No 120
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.6e-37 Score=352.22 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=203.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+..|..+++.+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~------------- 67 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------------
Confidence 369999999999999999999999999975421 112334566788888764 99999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 68 ---------------------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGD---------------AKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGV 184 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCC---------------CceeeecCCccccCHHHHcC-CCCCchhhhhhHHH
Confidence 999999999999999999999986421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH-HHHhccCCCCchHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQMEYELL 697 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~-eiL~~~~~~~~~~~~~ 697 (1196)
++|||++ ||......+............| ...+.+++++|.+||+.||.+||++. ++++|+||....+..+
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHH
Confidence 9999997 8876655444333322222222 23456899999999999999999996 8999999999876544
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.1e-37 Score=359.43 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=209.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 113 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4799999999999999999999999999999999864322 2223456788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ ++|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 114 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589888865 458999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++++||+|||+++.+.... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 226 (371)
T cd05622 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (371)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--------------cccccCcccCccccCHHHHhccCCCccCCC
Confidence 999999999999999999999999999997643211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..++.+ |++++++++|+|
T Consensus 227 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 9999999999999996 887665554444444332222 2233456789999999999854443 789999999999
Q ss_pred CCCchHHH
Q 000993 689 PPQMEYEL 696 (1196)
Q Consensus 689 ~~~~~~~~ 696 (1196)
|.+..+.+
T Consensus 307 ~~~~~~~~ 314 (371)
T cd05622 307 FKNDQWAW 314 (371)
T ss_pred cCCCChhH
Confidence 98866544
No 122
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.1e-36 Score=345.40 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||.|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--------
Confidence 57899999999999999999999999999999998754322 233467789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 76 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred --------------------------------CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999999888754 5689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 188 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------CcccccceeecccCcHHHhCCCCCccHHHH
Confidence 99999999999999999999999999997532111 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+......... ...|. .....++.+++||.+
T Consensus 189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence 999999999997 665443332221111100 00110 112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||++++++|+||....
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998765
No 123
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=357.99 Aligned_cols=249 Identities=25% Similarity=0.423 Sum_probs=205.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|.-++.||.|+||.||-|++..+.+.||||++.... .+.+.-+++++||..|++++|||+|.|.|||+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr---------- 97 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR---------- 97 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----------
Confidence 555788999999999999999999999999998654 344556789999999999999999999999954
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|+|||||-|+-.|++.- ..++.+-++..|+.+.+.||+|||+++.
T Consensus 98 ------------------------------e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~ 147 (948)
T KOG0577|consen 98 ------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR 147 (948)
T ss_pred ------------------------------cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 334589999999988888764 4578999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKADM 618 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ksDV 618 (1196)
||||||..|||+++.|.|||+|||.|.... ...+++|||.|||||++.. .+.|+-++||
T Consensus 148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~-------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDv 208 (948)
T KOG0577|consen 148 IHRDIKAGNILLSEPGLVKLADFGSASIMA-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDV 208 (948)
T ss_pred HhhhccccceEecCCCeeeeccccchhhcC-------------------chhcccCCccccchhHheeccccccCCccce
Confidence 999999999999999999999999997642 2367899999999998753 3679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||+..||.- |+....-+..... +.++....-.....+..+++|+..||++-|.+|||.+++|+|+|...
T Consensus 209 WSLGITCIELAERkPPlFnMNAMSALYH-IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 209 WSLGITCIELAERKPPLFNMNAMSALYH-IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred eeccchhhhhhhcCCCccCchHHHHHHH-HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 999999999984 5444433333333 33232221122233457899999999999999999999999998644
No 124
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-36 Score=343.79 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=198.0
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||+||+|.++.+|+.||+|++...... ......+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------------- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ----------------- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----------------
Confidence 69999999999999999999999998754322 122356788999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+|+|||||+ ++|.+.+.. ...+++..++.++.||+.||+|||++||+|
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 64 -----------------------TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred -----------------------CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2356899999997 588877642 346999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.+||+|||++..+.... .......||+.|+|||++.+ ..++.++||||||
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG 184 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQ---------------SKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALG 184 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCC---------------ccccccCCCcCccCHHHhcC-CCCCccccHHHHH
Confidence 9999999999999999999999997543211 01233578999999999988 5789999999999
Q ss_pred HHHHHhhc---CCchhHHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCC
Q 000993 623 IVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 690 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~ 690 (1196)
|++|||++ ||...... ........ . ........++.+.+++.+||+.||.+|| +++++++|+||.
T Consensus 185 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 185 VTLYEMIAARGPFRARGEKVENKELKQRILN--D-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHhCCCCCCCCCcchhHHHHHHhhcc--c-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 99999996 77643221 11111111 1 1112234567899999999999999999 889999999999
Q ss_pred CchHHH
Q 000993 691 QMEYEL 696 (1196)
Q Consensus 691 ~~~~~~ 696 (1196)
+..+..
T Consensus 262 ~~~~~~ 267 (280)
T cd05608 262 DLNWRQ 267 (280)
T ss_pred cCCHhH
Confidence 876653
No 125
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.5e-36 Score=352.13 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=212.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------- 71 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 479999999999999999999999999999999864321 1223345788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ |+|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred -------------------------------cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999976 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||++..+.... .......+||+.|+|||++.+ ...++
T Consensus 121 ~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (332)
T cd05623 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEDGKGKYG 186 (332)
T ss_pred CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------cceecccccCccccCHHHHhccccCCCCCC
Confidence 999999999999999999999999999987542111 011233579999999999863 24588
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+......... ..+|......++++++||++||+.+|.+ |+++.++++|
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99999999999999996 887666555544444332 2244444567789999999999765554 7899999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||.+..+..+.
T Consensus 267 ~~f~~~~~~~~~ 278 (332)
T cd05623 267 PFFTGIDWDNIR 278 (332)
T ss_pred CCcCCCCHHHHh
Confidence 999998876553
No 126
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-36 Score=351.29 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.++||.|+||.||+|.++.++..+|+|++.... .......+.+|+++++.++||||++++++|.+
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 74 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--------- 74 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE---------
Confidence 68999999999999999999999999999999987542 33445678999999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~- 538 (1196)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||+.
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 75 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 346899999996 59999998888899999999999999999999975
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+|+||||||+|||++.++.+||+|||++..+... ......||+.|+|||++.+ ..++.++||
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSDI 185 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----------------ccccCCCCccccCHHHhcC-CCCCcHHHH
Confidence 7999999999999999999999999999754211 1123478999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHH------------------------------------------hhhcCCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSD------------------------------------------LKQKGELPP 653 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~------------------------------------------l~~~~~~p~ 653 (1196)
|||||++|||++ ||............ .......+.
T Consensus 186 wslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (333)
T cd06650 186 WSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPK 265 (333)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCcc
Confidence 999999999996 77544332211000 000000011
Q ss_pred c-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 654 S-WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 654 ~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
. ....+.++++||.+||+.||++|||+.++++|+|+....
T Consensus 266 ~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 266 LPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred CCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0 012346789999999999999999999999999997654
No 127
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-39 Score=341.88 Aligned_cols=250 Identities=26% Similarity=0.472 Sum_probs=210.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+-|.++.+||+|+||.||+|.|+.+|+.+|||++... ...+++.+|+.++.++..|++|+|||.|+.
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--------- 99 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--------- 99 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc---------
Confidence 4578899999999999999999999999999988642 346789999999999999999999998854
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+ |+..++++. +.++++.++..++...+.||+|||..
T Consensus 100 -------------------------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 100 -------------------------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred -------------------------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 346899999997 799999974 46799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
.-||||||..|||++.+|++||+|||.|..+.... ...++..|||.|||||+++. -.|+.++||
T Consensus 149 ~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADI 212 (502)
T KOG0574|consen 149 KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADI 212 (502)
T ss_pred HHHHhhcccccEEEcccchhhhhhccccchhhhhH---------------HhhCccccCcccccHHHHHH-hccchhhhH
Confidence 99999999999999999999999999998654221 23466799999999999997 469999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc---cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV---AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~---~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++..||.- ||.+..++.....+ ....||.+. ..+.++.++|+.||-+.|++|-|+-++++|+|.++-
T Consensus 213 WSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 213 WSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhcchhhhhhcCCCCcccccccceeEec---cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999984 77776665433322 122233222 234578899999999999999999999999998876
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
+
T Consensus 290 ~ 290 (502)
T KOG0574|consen 290 P 290 (502)
T ss_pred C
Confidence 4
No 128
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.6e-36 Score=367.79 Aligned_cols=266 Identities=27% Similarity=0.425 Sum_probs=215.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||+||+|++..+|+.||||++.....+......+.+|+.++..++|+||++++..+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~----- 105 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP----- 105 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc-----
Confidence 468999999999999999999999999999999998766555566778899999999999999999877643210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
........+++||||++ |+|.+++... ..+++..++.++.||+.||+|
T Consensus 106 ---------------------------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 106 ---------------------------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred ---------------------------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 00112345789999997 6999988643 468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~-------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~ 224 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS-------------DDVGRTFCGTPYYVAPEIWRR-KPYSK 224 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-------------ccccccccCCcceeCHHHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 011234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||.............. ...++.....++++.+++.+||+.||.+||++.++++|+|++.
T Consensus 225 k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655554444332 2233333456789999999999999999999999999998765
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 303 ~~ 304 (496)
T PTZ00283 303 FI 304 (496)
T ss_pred hh
Confidence 43
No 129
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=354.21 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=198.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|+.+++||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH------- 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------
Confidence 4578999999999999999999999999999999986432 33445678999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||.+ +|.+. ....+..+..++.||+.||+|||+
T Consensus 144 ---------------------------------~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~ 186 (353)
T PLN00034 144 ---------------------------------NGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR 186 (353)
T ss_pred ---------------------------------CCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 66532 345678888999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||+++.+.... .......||+.|+|||++... ...+
T Consensus 187 ~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 251 (353)
T PLN00034 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------DPCNSSVGTIAYMSPERINTDLNHGAYDG 251 (353)
T ss_pred CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc---------------ccccccccCccccCccccccccccCcCCC
Confidence 999999999999999999999999999997643211 011345799999999987531 2345
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||...... ........ ....+......+.++.+||.+||+.||.+|||+.++++|+|
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 68999999999999996 77532211 11111111 12223333456678999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+...
T Consensus 331 ~~~~ 334 (353)
T PLN00034 331 ILRA 334 (353)
T ss_pred cccC
Confidence 9874
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.8e-36 Score=341.92 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=206.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|++.+.||+|+||+||++.+..+++.||||++...... ......+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE---------- 70 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec----------
Confidence 488999999999999999999999999999998754322 122345778999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|+|||||+ ++|.+++... ..+++..+..++.||+.||+|||+
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 71 ------------------------------TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred ------------------------------CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2357899999996 5888877543 459999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||++++++.++|+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05605 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------TIRGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----------------ccccccCCCCccCcHHhcC-CCCCcccc
Confidence 999999999999999999999999999987542111 1123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHH---HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~---~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~ 686 (1196)
||||||++|||++ ||........ ....+.. ..+......++.+.+||.+||..||.+|| +++++++|
T Consensus 184 iws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 8865433221 1111111 11222234567899999999999999999 99999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+.-++
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05605 262 PFFRTANFKRLE 273 (285)
T ss_pred cCccCCCHHHHh
Confidence 999987666443
No 131
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.8e-36 Score=351.36 Aligned_cols=264 Identities=24% Similarity=0.402 Sum_probs=212.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+++++.+++.||+|++.... ........+.+|..+++.++||||+++++++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------- 71 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 57999999999999999999999999999999986432 12223445788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~ 120 (331)
T cd05624 72 -------------------------------DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120 (331)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599999976 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++.+. ..++
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--------------TVQSSVAVGTPDYISPEILQAMEDGMGKYG 186 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--------------ceeeccccCCcccCCHHHHhccccCCCCCC
Confidence 999999999999999999999999999997543211 0112235799999999998752 3478
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||+||||++ ||......+....+.... ..+|+.+...+.+++++|.+||+.++.+ |++++++++|
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 89999999999999996 887665554444443322 2244455556789999999999876654 5799999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+....
T Consensus 267 ~~f~~~~~~~~~ 278 (331)
T cd05624 267 AFFEGIDWENIR 278 (331)
T ss_pred CCcCCCCHHHHh
Confidence 999998877553
No 132
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.4e-37 Score=354.67 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=202.3
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
||+|+||+||+|+++.+|+.||||++..... .......+..|..++..+ .||||++++++|.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-------------- 66 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-------------- 66 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe--------------
Confidence 7999999999999999999999999864322 112234455677777665 6999999998773
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHr 120 (330)
T cd05586 67 --------------------------TDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120 (330)
T ss_pred --------------------------cCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2456899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 121 DLKPENILLDATGHIALCDFGLSKANLTDN---------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred cCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------CCccCccCCccccCHHHHcCCCCCCCccceecccc
Confidence 999999999999999999999987432110 11234579999999999987556899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC----CHHHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----ta~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+...........+|.. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN--VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc--cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999996 887655544444333333333322 3467899999999999999998 799999999999877654
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
+
T Consensus 264 ~ 264 (330)
T cd05586 264 L 264 (330)
T ss_pred H
Confidence 4
No 133
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.6e-36 Score=346.91 Aligned_cols=250 Identities=26% Similarity=0.435 Sum_probs=189.0
Q ss_pred EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 386 LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----------- 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----------- 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC-----------
Confidence 368999999999999976 3678999999864322 34577899999999999999999887432
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHH
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 71 ---------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 71 ---------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred ---------------------------CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887532 248899999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+|||+ +.++.+||+|||+|+........ ........||+.|+|||++.+..
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~ 191 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGAR 191 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc------------ccccCCccccccccCCHHHcCCC
Confidence 999999999999999999 45578999999999865321100 01123457899999999998756
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHhhhcC-----------CCC---------------
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKG-----------ELP--------------- 652 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l~~~~-----------~~p--------------- 652 (1196)
.++.++||||+||++|||++ ||...... ..........+ ..+
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
T cd07868 192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 271 (317)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC
Confidence 68999999999999999997 66422110 00000000000 000
Q ss_pred ---------CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 653 ---------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 653 ---------~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.......+++.+||++||+.||.+|||++++|+||||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 272 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123467899999999999999999999999997
No 134
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.3e-36 Score=349.81 Aligned_cols=253 Identities=22% Similarity=0.368 Sum_probs=203.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT------------- 67 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------------
Confidence 369999999999999999999999999975432 223345688899999888 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 68 ---------------------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 456899999996 5899988888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGV 184 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCC---------------CceecccCCcccCCHHHHCC-CCCCchheeehhHH
Confidence 999999999999999999999987421110 01234579999999999987 57899999999999
Q ss_pred HHHHhhc---CCchh------HHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHhcc
Q 000993 624 VFFELWH---PFSTA------MERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQDA 687 (1196)
Q Consensus 624 iLyELlt---Pf~~~------~~~~~~~~~l~~~-~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~~~ 687 (1196)
+||||++ ||... ............. ..+| ...+..+.++|++||+.||.+|++ ++++++|+
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 9999996 77421 1122222222222 2222 235678999999999999999997 67999999
Q ss_pred CCCCchHHHHH
Q 000993 688 LPPQMEYELLD 698 (1196)
Q Consensus 688 ~~~~~~~~~~~ 698 (1196)
||....++.+.
T Consensus 262 ~f~~~~~~~~~ 272 (327)
T cd05617 262 FFRSIDWDLLE 272 (327)
T ss_pred CCCCCCHHHHH
Confidence 99999877553
No 135
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-36 Score=354.29 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=193.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++||||++++++|.+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 128 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVS--------- 128 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEe---------
Confidence 4799999999999999999999999999999975321 23568999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||+.++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 129 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 129 -------------------------------GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -------------------------------CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346789999999999988865 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw 240 (357)
T PHA03209 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------------PAFLGLAGTVETNAPEVLAR-DKYNSKADIW 240 (357)
T ss_pred eecCCCCHHHEEECCCCCEEEecCccccccccC----------------cccccccccccccCCeecCC-CCCCchhhHH
Confidence 999999999999999999999999999743211 01234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc----CCchhH-----H----HHHHHHHhhhcCCCCCcc-------------------------------
Q 000993 620 SLGIVFFELWH----PFSTAM-----E----RQIVLSDLKQKGELPPSW------------------------------- 655 (1196)
Q Consensus 620 SlGviLyELlt----Pf~~~~-----~----~~~~~~~l~~~~~~p~~~------------------------------- 655 (1196)
||||++|||++ +|.... . .......+...+..|..+
T Consensus 241 SlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T PHA03209 241 SAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQR 320 (357)
T ss_pred HHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhc
Confidence 99999999985 222110 0 011111111111111100
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
...+.++.+||.+||+.||.+|||+.++|+||||.++
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 1223456779999999999999999999999999864
No 136
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-36 Score=352.08 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=202.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~------------- 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------------
Confidence 369999999999999999999999999975422 2223345556654 4677899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~ 120 (325)
T cd05604 68 ---------------------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120 (325)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQS---------------DTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCC---------------CCcccccCChhhCCHHHHcC-CCCCCcCccccccc
Confidence 999999999999999999999986421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............++ ..+..+.++|++||..||.+||++ .++++|+||....+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 185 VLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP---GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred eehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9999996 88766555544444433222232 456789999999999999999976 6999999999877654
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (325)
T cd05604 262 L 262 (325)
T ss_pred H
Confidence 3
No 137
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.6e-36 Score=377.78 Aligned_cols=261 Identities=31% Similarity=0.553 Sum_probs=211.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....+++|++++.||+|+||+||+|+++.++..||+|++............+.+|+.+|+.|+|||||+++++|...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 34557899999999999999999999999999999999986655555667899999999999999999999988542
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~ 530 (1196)
....+|||||||+ ++|.++|.. ...+++..++.|+.||+.
T Consensus 85 -----------------------------------~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 85 -----------------------------------ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred -----------------------------------CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 2356899999997 599998865 256999999999999999
Q ss_pred HHHHHHhC-------CCcccCCCcCcEEecC-----------------CCCeEEeccCcchhccccccccCCCCCCCCCC
Q 000993 531 GLAHIHGQ-------GIIHRDLTPNNIFFDA-----------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586 (1196)
Q Consensus 531 gL~yLHs~-------gIiHrDLKp~NILld~-----------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~ 586 (1196)
||+|||+. +||||||||+||||+. .+.+||+|||++..+....
T Consensus 130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------- 196 (1021)
T PTZ00266 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------- 196 (1021)
T ss_pred HHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-------------
Confidence 99999985 4999999999999964 2348999999997542111
Q ss_pred ccccCcCccccccCCCchhccCC-CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHH
Q 000993 587 VSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 662 (1196)
Q Consensus 587 ~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l 662 (1196)
.....+||+.|+|||++.+. ..++.++||||||||||||++ ||............+.....+| ....++++
T Consensus 197 ---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL 271 (1021)
T PTZ00266 197 ---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKEL 271 (1021)
T ss_pred ---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHH
Confidence 11335799999999998642 358899999999999999997 8865554444444444333222 23456789
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||..||+.+|.+||++.++|+|+|+...
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 999999999999999999999999887654
No 138
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-36 Score=338.13 Aligned_cols=252 Identities=35% Similarity=0.561 Sum_probs=203.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||+|+||+||+|++..+++.||+|++..............+|+.+++.++||||+++++.+.+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------- 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----------- 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----------
Confidence 788999999999999999999999999999998765444444455679999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...++++||||++ +|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 70 -----------------------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp -----------------------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4577899999987 9999999888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+||+++.++.++|+|||.+...... ........+|+.|+|||++.....++.++|||||
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 185 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSEN---------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSL 185 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTST---------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998753110 1122445789999999999833678999999999
Q ss_pred HHHHHHhhc---CCchh---HHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 622 GIVFFELWH---PFSTA---MERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 622 GviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+++|+|++ ||... ................ ........+.+.++|++||+.||++||++.++++||||
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999997 77655 2222222221111000 01111112689999999999999999999999999996
No 139
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-36 Score=350.14 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=200.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHH-HHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREV-ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev-~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|++..... .......+.+|. .+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~------------- 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------------- 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------------
Confidence 369999999999999999999999999975321 112223444454 45678899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||++ +|.+++.....+.+..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 68 ---------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 4568999999974 899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHN---------------GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCC---------------CCcccccCCccccCHHHHcC-CCCCCccccccccH
Confidence 999999999999999999999987432110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH----HHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT----ELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~----eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............+ ...++.+.++|++||+.||.+||++. ++++|+|+....+.-
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~ 261 (325)
T cd05602 185 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDD 261 (325)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHH
Confidence 9999996 8876555444433333222222 34567899999999999999999865 899999998876653
No 140
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-36 Score=348.97 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=200.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-------------- 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-------------- 66 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE--------------
Confidence 369999999999999999999999999875322 1222344555554 678899999999998763
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 67 --------------------------TAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred --------------------------cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2456899999997 5898888888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPE---------------ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGA 184 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCC---------------CccccccCCcccCCHHHhcC-CCCCCcCcccccch
Confidence 999999999999999999999987421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~ 695 (1196)
++|||++ ||..................+| ...+..+.++|.+||+.||.+||++ .++++|+|+....+.
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 185 VLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 9999997 7876655444444333222233 2346689999999999999999875 599999999887655
No 141
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-37 Score=351.65 Aligned_cols=248 Identities=27% Similarity=0.388 Sum_probs=201.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+++.+...||+|.||+||+|+|- -.||||+++....+.+..+.|.+||.+|++=+|.||+-+.|+|..
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~-------- 459 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN-------- 459 (678)
T ss_pred HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--------
Confidence 356677889999999999999997 359999999988888888999999999999999999999999843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+.+.||+.+|.| +|+.+++- ...|+....+.|+.||++||.|||.
T Consensus 460 ---------------------------------p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA 506 (678)
T KOG0193|consen 460 ---------------------------------PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA 506 (678)
T ss_pred ---------------------------------CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence 234899999987 89999874 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~k 615 (1196)
++|||||||+.|||+.+++.|||+|||++.....-...+ ......|...|||||++.. ...|++.
T Consensus 507 K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~-------------q~~qp~gsilwmAPEvIRmqd~nPfS~q 573 (678)
T KOG0193|consen 507 KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ-------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQ 573 (678)
T ss_pred hhhhhhhccccceEEccCCcEEEecccceeeeeeecccc-------------ccCCCccchhhhcHHHHhhcccCCCCcc
Confidence 999999999999999999999999999997643221111 1122357889999999764 2458999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||||||++|||++ ||......++....-+ ....| .....+..++++|+..||..++++||.+.+||.
T Consensus 574 SDVYaFGiV~YELltg~lPysi~~~dqIifmVGr-G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 574 SDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR-GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred cchhhhhHHHHHHHhCcCCcCCCChhheEEEecc-cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 999999999999997 8884444444332222 21112 222334458999999999999999999999986
No 142
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-35 Score=331.34 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+.||.|++|.||+|.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 5788999999999999999999999999999998754322 1234568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||
T Consensus 76 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 76 ----------------------------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred ----------------------------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999997 489999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.||+||||||+||+++.++.++|+|||+++........ ........|++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (263)
T cd06625 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 188 (263)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------cccccCCCcCccccCcceecc-CCCCchh
Confidence 999999999999999999999999999998754321100 000123468899999999988 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||||+++|||++ ||.............. ....+......++.+.++|++||..+|.+|||+.++++|+||
T Consensus 189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999997 7765544433333222 222233333456789999999999999999999999999996
No 143
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=337.79 Aligned_cols=264 Identities=25% Similarity=0.391 Sum_probs=223.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.....+|..+.+||+|+||+|.+|..+.+.+.||||+++..-.- ....+--+.|-++|+.. +-|.+++++.||
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 34467999999999999999999999999999999998753211 11233345677777766 567888888776
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+....+|+||||+. |+|...+++.++|.++.+..|+.+|+-||-
T Consensus 420 -----------------------------------QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF 464 (683)
T KOG0696|consen 420 -----------------------------------QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF 464 (683)
T ss_pred -----------------------------------hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh
Confidence 34578999999996 599999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||+||||.+|||++.+|++||+|||+++.--.. ..++.++||||.|+|||++.. ..|+
T Consensus 465 FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---------------~~TTkTFCGTPdYiAPEIi~Y-qPYg 528 (683)
T KOG0696|consen 465 FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---------------GVTTKTFCGTPDYIAPEIIAY-QPYG 528 (683)
T ss_pred hhhcCCeeeeeccccceEeccCCceEeeecccccccccC---------------CcceeeecCCCcccccceEEe-cccc
Confidence 999999999999999999999999999999999742111 123567899999999999987 5799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~ 685 (1196)
.++|||||||+||||+. ||.+.++.+....+...+..+|.+++ .++.++++.+|.+.|.+|.. -.+|-.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~ 605 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS---KEAVAICKGLLTKHPGKRLGCGPEGERDIRE 605 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc---HHHHHHHHHHhhcCCccccCCCCccccchhh
Confidence 99999999999999995 99999999999888888877777654 49999999999999999974 467899
Q ss_pred ccCCCCchHHHHHH
Q 000993 686 DALPPQMEYELLDN 699 (1196)
Q Consensus 686 ~~~~~~~~~~~~~~ 699 (1196)
|+||+.+.|+-+..
T Consensus 606 H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 606 HPFFRRIDWEKLER 619 (683)
T ss_pred CcchhhccHHHHhh
Confidence 99999999886644
No 144
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.7e-35 Score=328.22 Aligned_cols=250 Identities=31% Similarity=0.582 Sum_probs=208.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.++.+++.|++|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD---------- 70 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----------
Confidence 5888999999999999999999999999999998665555567789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 71 ------------------------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred ------------------------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 5999998764 5689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++.+.... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---------------NFANTIVGTPYYLSPELCED-KPYNEKSDV 184 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCcc---------------chhhccccCccccCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987653221 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||.............. ...++.....++++.++|.+||+.+|++||++.++++|+|.
T Consensus 185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 185 WALGVVLYECCTGKHPFDANNQGALILKIIR--GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999996 7776654444333332 23333333556789999999999999999999999999874
No 145
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.2e-35 Score=327.79 Aligned_cols=251 Identities=28% Similarity=0.519 Sum_probs=205.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|++|.||++.++.+++.||+|++............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---------- 70 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----------
Confidence 5899999999999999999999999999999997655554556678899999999999999999876521
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|++|||++ ++|.+++... ..+++.+++.++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 71 -----------------------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred -----------------------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1346899999997 5899888753 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------DMASTLIGTPYYMSPELFSN-KPYNYKSDV 185 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------CccccccCCcCccChhHhcC-CCCCchhhh
Confidence 99999999999999999999999999997653211 01123468999999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||............. ....++.....++.+.+++.+||+.||.+||++.++++|+|+
T Consensus 186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 186 WALGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999997 665544333332222 223333334566789999999999999999999999999996
No 146
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-35 Score=334.30 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=201.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--------- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee---------
Confidence 47899999999999999999999999999999987544333344567899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++|||+++ .|..++.....+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 72 -------------------------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred -------------------------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999987 45555556667999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||++..+..... ......++..|+|||++.+...++.++|||
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 185 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---------------DYTDYVATRWYRAPELLVGDTQYGPPVDVW 185 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcc---------------cccCcccccccCCHHHHhCCCCcCchhhhH
Confidence 99999999999999999999999999986532210 112345788999999987755688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCC---------ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||......+.......... ..|. .+...+..+.+||.+
T Consensus 186 slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07847 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKG 265 (286)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHH
Confidence 99999999997 6765443322221111000 0010 112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.||++||++.+++.|+||
T Consensus 266 ~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 266 CLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999997
No 147
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.2e-35 Score=337.02 Aligned_cols=270 Identities=23% Similarity=0.386 Sum_probs=206.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++.+.||+|+||.||+|.++.+++.||||++............+.+|+.+++.++||||+++++++......
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~- 86 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP- 86 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc-
Confidence 4456889999999999999999999999999999999875443333344567899999999999999999887442100
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yL 535 (1196)
........|+||||++++|.+.+.... .+++.+++.++.||+.||+||
T Consensus 87 -------------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l 135 (310)
T cd07865 87 -------------------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI 135 (310)
T ss_pred -------------------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 012245689999999999988887553 689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++|+||||+||+++.++.+||+|||++.......... ........++..|+|||.+.+...++.+
T Consensus 136 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 204 (310)
T cd07865 136 HRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-----------PNRYTNRVVTLWYRPPELLLGERDYGPP 204 (310)
T ss_pred HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-----------CCCccCcccCccccCcHHhcCCcccCch
Confidence 99999999999999999999999999999998653221110 0112334678999999998775557899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-----------------------------cccCCHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-----------------------------WVAKFSEQE 663 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-----------------------------~~~~~~~l~ 663 (1196)
+||||||+++|||++ ||................+..++. .....+.+.
T Consensus 205 ~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 284 (310)
T cd07865 205 IDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHAL 284 (310)
T ss_pred hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHH
Confidence 999999999999996 565443322211111111111110 001235678
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||.+||..||.+|||++++++|+||
T Consensus 285 dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 285 DLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHhcCChhhccCHHHHhcCCCC
Confidence 99999999999999999999999997
No 148
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.5e-35 Score=339.61 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=208.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+.+++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK----- 78 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----
Confidence 346899999999999999999999999999999999976543333334567899999999999999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 79 ---------------------------------HLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred ---------------------------------CCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1246799999999999888875 366999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 190 (309)
T cd07845 126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------KPMTPKVVTLWYRAPELLLGCTTYTTAI 190 (309)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------CCCCcccccccccChhhhcCCCCcCchH
Confidence 9999999999999999999999999999997653211 0112335688999999987756689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCCc--------cccCCHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPPS--------WVAKFSEQESLL 666 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~~--------~~~~~~~l~~LI 666 (1196)
|||||||++|||++ ||......+.........+ ..+.. ....++.+.++|
T Consensus 191 DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (309)
T cd07845 191 DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270 (309)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHH
Confidence 99999999999996 6665544443322221110 00000 112356788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||+.||.+|||+.++++|+||...
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccC
Confidence 99999999999999999999999764
No 149
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-35 Score=335.17 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+.++.||.|++|.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----------- 69 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----------
Confidence 588999999999999999999999999999998755444344467889999999999999999998762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
+....|++|||++++|..++.. ...+++..++.++.||+.||+|||+++
T Consensus 70 -----------------------------~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 70 -----------------------------TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred -----------------------------cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2346799999999899888865 356899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------cccccccccccccCCeEEecCCCCCcHHHHH
Confidence 9999999999999999999999999987543211 0112335788999999987755578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------CC--------CccccCCHHHHHHHHHcc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------LP--------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------~p--------~~~~~~~~~l~~LI~~cL 670 (1196)
||||++|||+| ||.................. .+ ......+++++++|.+||
T Consensus 186 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07860 186 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265 (284)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhc
Confidence 99999999997 66544332222221111000 00 001234567889999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||+.++++|+||
T Consensus 266 ~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 266 HYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
No 150
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-37 Score=341.35 Aligned_cols=259 Identities=28% Similarity=0.435 Sum_probs=215.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+.|...++||+||||.||-|+.+.||+.||+|++.++..... -....++|-.+|..++.|.||.+--+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------- 254 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------- 254 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee---------
Confidence 4678899999999999999999999999999999865442222 234567899999999999999987665
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+....+++||..|+ |+|.-+|-..+ .|+++.++.|+.+|+.||++|
T Consensus 255 -------------------------------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl 303 (591)
T KOG0986|consen 255 -------------------------------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL 303 (591)
T ss_pred -------------------------------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH
Confidence 24678999999996 58988776554 799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|..+||+|||||+|||+|+.||++|+|.|+|..+...+ ..++++||.+|||||++++ ..|+..
T Consensus 304 H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~----------------~~~~rvGT~GYMAPEvl~n-e~Y~~s 366 (591)
T KOG0986|consen 304 HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK----------------PIRGRVGTVGYMAPEVLQN-EVYDFS 366 (591)
T ss_pred HhcceeeccCChhheeeccCCCeEeeccceEEecCCCC----------------ccccccCcccccCHHHHcC-CcccCC
Confidence 99999999999999999999999999999998764332 1345699999999999998 559999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~ei 683 (1196)
.|+|||||+||||+. ||....+. ++...++.....++ ...++++++|.+.+|++||.+|. ++.++
T Consensus 367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 999999999999994 98765442 33333443333444 34567999999999999999997 57899
Q ss_pred HhccCCCCchHHHHH
Q 000993 684 LQDALPPQMEYELLD 698 (1196)
Q Consensus 684 L~~~~~~~~~~~~~~ 698 (1196)
.+||||+.++|.-+.
T Consensus 444 k~HpfFk~lnw~rle 458 (591)
T KOG0986|consen 444 KEHPFFKDLNWRRLE 458 (591)
T ss_pred hhCcccccCCHhHHh
Confidence 999999999887553
No 151
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-35 Score=360.50 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=207.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|.+.+.||+|+||.||+|....+ ++.||+|.+... .......+.+|+.+|+.++|||||+++++|..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-------- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--------
Confidence 4599999999999999999999877 788999976543 23344567889999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|||||||+ |+|.+++.. ..++++..+..++.||+.||+|
T Consensus 137 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 184 (478)
T PTZ00267 137 --------------------------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE 184 (478)
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 599887753 3468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 250 (478)
T PTZ00267 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASSFCGTPYYLAPELWER-KRYSK 250 (478)
T ss_pred HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-------------cccccccCCCccccCHhHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 011234579999999999987 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||......+....... +..++.....++++.++|.+||..||++||++.+++.|+|+..
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999996 8876655554444433 2223333456678999999999999999999999999987765
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 329 ~ 329 (478)
T PTZ00267 329 V 329 (478)
T ss_pred H
Confidence 3
No 152
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=334.83 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=197.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
..||+|++|.||+|.+ +|+.||||+++...... ...+.+.+|+.+|++++|||||++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~------------ 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV------------ 91 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc------------
Confidence 5799999999999988 59999999987543322 23467889999999999999999999885410
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHr 543 (1196)
....+++++||||+ |+|.+++.....+++.....++.|++.||+|||+ .+++||
T Consensus 92 ------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hr 147 (283)
T PHA02988 92 ------------------------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYK 147 (283)
T ss_pred ------------------------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 12356899999997 5899999888889999999999999999999998 499999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLG 622 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlG 622 (1196)
||||+|||++.++.+||+|||+++..... .....||+.|+|||++.+. ..++.++||||||
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSP------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccc------------------cccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 99999999999999999999999864311 1234688999999998752 4689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||......+......... ..++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 210 vil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 99999997 888766555444433322 2223333567799999999999999999999999864
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.5e-35 Score=334.44 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=195.7
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||.||+++++.+|+.||+|.+....... .....+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----------------- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----------------- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----------------
Confidence 799999999999999999999999986433221 12344567999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+|+||||++ ++|.+++... ..+++..++.++.||+.||+|||+.||+|||
T Consensus 64 -----------------------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 64 -----------------------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred -----------------------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 2456899999996 5898887543 3588999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~ 183 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK----------------TITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCS 183 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc----------------eeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHH
Confidence 99999999999999999999987543111 1123468999999999987 459999999999999
Q ss_pred HHHhhc---CCchhHH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCch
Q 000993 625 FFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQME 693 (1196)
Q Consensus 625 LyELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~ 693 (1196)
+|||++ ||..... .+...... ....+......++++++||++||+.||.+||++ .+++.|+||....
T Consensus 184 l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 184 IYEMVAGRTPFKDHKEKVAKEELKRRTL--EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HHHHHhCCCCCCCCcchhhHHHHHHHhh--ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 999996 7754322 11111111 112222223467789999999999999999999 6788999998876
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
+.
T Consensus 262 ~~ 263 (277)
T cd05607 262 FP 263 (277)
T ss_pred HH
Confidence 54
No 154
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-35 Score=350.52 Aligned_cols=257 Identities=25% Similarity=0.344 Sum_probs=201.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++|||||+++++|..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~------ 157 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW------ 157 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee------
Confidence 458999999999999999999864 34678999987532 235689999999999999999987732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++||++.++|.+++.....+++..++.++.||+.||+|||+
T Consensus 158 ----------------------------------~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~ 203 (392)
T PHA03207 158 ----------------------------------KSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG 203 (392)
T ss_pred ----------------------------------CCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999777889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..|+.++|
T Consensus 204 ~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 269 (392)
T PHA03207 204 RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------TPQCYGWSGTLETNSPELLAL-DPYCAKTD 269 (392)
T ss_pred CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-------------cccccccccccCccCHhHhcC-CCCCchhh
Confidence 9999999999999999999999999999976432210 011234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcC-------------------------C----CCCcc--ccCCH
Q 000993 618 MYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-------------------------E----LPPSW--VAKFS 660 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~-------------------------~----~p~~~--~~~~~ 660 (1196)
||||||++|||++ ||..... ......++...+ . .|... .....
T Consensus 270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (392)
T PHA03207 270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHM 349 (392)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcch
Confidence 9999999999986 6653321 111111110000 0 01000 12245
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
+++++|++||..||.+|||+.++|+||||.....+.+
T Consensus 350 ~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 350 DVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred hHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 7889999999999999999999999999988776644
No 155
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-37 Score=351.19 Aligned_cols=248 Identities=29% Similarity=0.424 Sum_probs=209.4
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
+||+|.||+||.|+++.+...+|||-|..+ ..+..+-+.+|+.+.+.|+|.|||+|+|++-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se---------------- 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSE---------------- 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCC----------------
Confidence 699999999999999999999999988643 34556678899999999999999999998732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCC--CHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHF--DKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l--~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
..++-|.||-++ |+|.++++. -+++ .+..+-.|.+||++||.|||.+.||||
T Consensus 644 ------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 644 ------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred ------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 346789999997 599999974 4777 788888999999999999999999999
Q ss_pred CCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc-CCCCCCCcchhHHH
Q 000993 544 DLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-GWPKIDEKADMYSL 621 (1196)
Q Consensus 544 DLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~s~ksDVwSl 621 (1196)
|||-+|+||+. .|.+||+|||.++.+..- ...+.++.||..|||||++. |...|+.++|||||
T Consensus 700 DIKGDNVLvNTySGvlKISDFGTsKRLAgi---------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 700 DIKGDNVLVNTYSGVLKISDFGTSKRLAGI---------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred cccCCcEEEeeccceEEecccccchhhccC---------------CccccccccchhhhChHhhccCCcCCCchhhhhhc
Confidence 99999999975 689999999999976421 22345678999999999985 44569999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||++.||.| ||......+..+-.+-.-...|+.+...+.+++++|.+|+.+||.+||++.++|++||.+..
T Consensus 765 GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 765 GCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred cceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999998 88776666555544444444566667777899999999999999999999999999987754
No 156
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.9e-35 Score=337.83 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=188.0
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH------------ 70 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc------------
Confidence 589999999999999764 568899998864322 34578899999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 71 --------------------------SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887521 2488999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 536 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|++||+||||||+|||+ +.++.+||+|||+++........ ........||+.|+|||++.+...
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc------------ccccCcceecccccCcHHhcCCCc
Confidence 99999999999999999 45678999999999865322100 011234578999999999987556
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHh--------------hhcCCCC-------------
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDL--------------KQKGELP------------- 652 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l--------------~~~~~~p------------- 652 (1196)
++.++|||||||++|||++ ||....+. ....... ......+
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence 8999999999999999997 56422110 0000000 0000000
Q ss_pred --------CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 653 --------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 653 --------~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.........+.+||.+||+.||.+|||+.++|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0001123457789999999999999999999999997
No 157
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-35 Score=341.54 Aligned_cols=265 Identities=19% Similarity=0.278 Sum_probs=201.6
Q ss_pred EEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
++++||+| +||+||++.++.+|+.||+|+++...........+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----------- 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------- 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----------
Confidence 45789999 78999999999999999999997655444555678889999999999999999988743
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 71 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 71 -----------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred -----------------------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999997 5899988653 45899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDV 618 (1196)
|+||||||+|||++.++.++++||+.+.......... .. .........++..|+|||++.+. ..++.++||
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 193 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--RV------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 193 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccc--cc------cccccccccceecccChHHhhcccCCCCchhhH
Confidence 9999999999999999999999998765432111000 00 00001223577889999998753 358999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------C------------------------------------C
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------L------------------------------------P 652 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------~------------------------------------p 652 (1196)
|||||++|||++ ||.................. . .
T Consensus 194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T cd08227 194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH 273 (327)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence 999999999996 77644333322222111000 0 0
Q ss_pred CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 653 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 653 ~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
+.....++.+.+||++||+.||.+|||+.++++|+||.+......
T Consensus 274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~~~ 318 (327)
T cd08227 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 318 (327)
T ss_pred ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchhhh
Confidence 011123467889999999999999999999999999988654433
No 158
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.1e-35 Score=334.07 Aligned_cols=274 Identities=23% Similarity=0.361 Sum_probs=213.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------- 71 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe---------
Confidence 479999999999999999999999999999999875432 2233457889999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+||||++| +|.+++.....+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 120 (305)
T cd05609 72 -------------------------------TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120 (305)
T ss_pred -------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 24578999999975 9999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++............................|+..|+|||.+.+ ..++.++|+
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 199 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDW 199 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhH
Confidence 9999999999999999999999999998742111100000000000000111123468899999999877 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~ 692 (1196)
|||||++|||++ ||......+............|......++++.++|++||+.||.+||+ +.++++|+||...
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999999999997 7776555444444333333333333356678999999999999999998 7999999999876
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
.+.
T Consensus 280 ~~~ 282 (305)
T cd05609 280 DWN 282 (305)
T ss_pred CHH
Confidence 654
No 159
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.2e-35 Score=332.82 Aligned_cols=255 Identities=29% Similarity=0.463 Sum_probs=212.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++||||+++++++.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--------
Confidence 478999999999999999999999999999999874332 22345678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 73 --------------------------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999995 69999998888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||+|+|||++.++.+||+|||+++..... .....|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di 181 (290)
T cd05580 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------TYTLCGTPEYLAPEIILS-KGYGKAVDW 181 (290)
T ss_pred CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------------------CCCCCCCccccChhhhcC-CCCCccccH
Confidence 9999999999999999999999999998764211 123468999999999887 467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~ 690 (1196)
||||+++|+|++ ||..................+|. ..++.++++|++||..||.+|+ +++++++|+||.
T Consensus 182 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 182 WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS---FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc---cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence 999999999997 77655544333333332323333 3357899999999999999999 999999999998
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+...
T Consensus 259 ~~~~~~~ 265 (290)
T cd05580 259 GIDWIAL 265 (290)
T ss_pred cCCHHHH
Confidence 8775533
No 160
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-35 Score=331.03 Aligned_cols=250 Identities=24% Similarity=0.443 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--------- 77 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--------- 77 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---------
Confidence 688999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++||||+ ++|.+++...+.+++.+++.++.||+.||+|||++|
T Consensus 78 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 78 -------------------------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999997 599999988889999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKAD 617 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ksD 617 (1196)
++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.. ...++.++|
T Consensus 127 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~D 191 (267)
T cd06645 127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 191 (267)
T ss_pred eecCCCCHHHEEECCCCCEEECcceeeeEccCcc---------------cccccccCcccccChhhhccccCCCCCchhh
Confidence 9999999999999999999999999987542110 11234578999999998742 245789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+|||||++|+|++ ||....+........... ..++. ....+..+.++|++||+.+|.+||+++++++|+|
T Consensus 192 vwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 192 IWAVGITAIELAELQPPMFDLHPMRALFLMTKSN-FQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hHHHHHHHHHHhcCCCCcccccchhhHHhhhccC-CCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 9999999999986 665444333222222111 11221 1234567899999999999999999999999987
No 161
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-35 Score=355.44 Aligned_cols=249 Identities=27% Similarity=0.347 Sum_probs=195.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|+.++|||||++++++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------- 231 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVV-------- 231 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 457999999999999999999999999999999642 1235689999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++||++.++|.+++... ..+++.+++.++.||+.||+|||++
T Consensus 232 --------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 279 (461)
T PHA03211 232 --------------------------------GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE 279 (461)
T ss_pred --------------------------------CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3457899999999999888654 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||||+.++.+||+|||+++....... .......+||+.|+|||++.+ ..++.++||
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDv 345 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------TPFHYGIAGTVDTNAPEVLAG-DPYTPSVDI 345 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-------------cccccccCCCcCCcCHHHHcC-CCCCchHHH
Confidence 999999999999999999999999999976432110 011234579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---C-Cchh-------HHHHHHHHHhhhcC----CCC-------------------------Cccc--
Q 000993 619 YSLGIVFFELWH---P-FSTA-------MERQIVLSDLKQKG----ELP-------------------------PSWV-- 656 (1196)
Q Consensus 619 wSlGviLyELlt---P-f~~~-------~~~~~~~~~l~~~~----~~p-------------------------~~~~-- 656 (1196)
|||||+||||++ | |... ...+ ...++.... .++ +.|.
T Consensus 346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
T PHA03211 346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY 424 (461)
T ss_pred HHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence 999999999974 2 2111 1111 111111100 000 1111
Q ss_pred -cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 -AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 -~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
...+.+.+||.+||+.||.+|||+.|+|+|+||+.
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 23347889999999999999999999999999975
No 162
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.2e-35 Score=326.05 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=208.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--------- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee---------
Confidence 47999999999999999999999899999999987544433 56789999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||+++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 71 -------------------------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999974 899998764 45899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||++++++.++|+|||++..+....... ........|++.|+|||++.....++.++
T Consensus 120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-----------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~ 188 (267)
T cd06610 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT-----------RKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188 (267)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-----------ccccccccCChhhcChHHHccccCcCccc
Confidence 9999999999999999999999999999998764322110 00123346899999999988744689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCc--cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPS--WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~--~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||.................. .+.. +...++.+.+++.+||..||.+||++.++++||||
T Consensus 189 Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred chHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999997 77665554444443332211 1111 12456788999999999999999999999999997
No 163
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.8e-35 Score=335.83 Aligned_cols=258 Identities=29% Similarity=0.431 Sum_probs=204.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||.|+||.||+|.++.+++.+|+|.++...........+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 76 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------ 76 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec------
Confidence 35789999999999999999999999999999999986554434445678899999999999999999887431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 77 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 124 (293)
T cd07843 77 --------------------------------NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD 124 (293)
T ss_pred --------------------------------CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 125789999999999999887644 59999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|
T Consensus 125 ~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~D 189 (293)
T cd07843 125 NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---------------KPYTQLVVTLWYRAPELLLGAKEYSTAID 189 (293)
T ss_pred CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---------------cccccccccccccCchhhcCCccccchhh
Confidence 999999999999999999999999999997653221 01123457889999999887555789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC---------------------------CCCCcccc--CCHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG---------------------------ELPPSWVA--KFSEQESL 665 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~---------------------------~~p~~~~~--~~~~l~~L 665 (1196)
+||||+++|+|++ ||................+ .....+.. .++.+.++
T Consensus 190 i~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (293)
T cd07843 190 MWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDL 269 (293)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHH
Confidence 9999999999997 5654433222221111000 00011111 25678899
Q ss_pred HHHcccCCCCCCCCHHHHHhccCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|++||+.||++|||+.++++|+||
T Consensus 270 i~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 270 LNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHHhccCccccCCHHHHhcCCCC
Confidence 999999999999999999999997
No 164
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.3e-35 Score=326.71 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=206.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+|.+.+.||.|+||+||+|... +|+.+|+|.+...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------ 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec------
Confidence 4778899999999999999874 8899999998754322 2233568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||+++ +|.+++.+...+++..++.++.||+.||+|||
T Consensus 74 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 74 ----------------------------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 99999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.+|+|+||||+||+++.++.++|+|||+++......... ..........|++.|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~ 189 (265)
T cd06631 120 NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG---------THSNMLKSMHGTPYWMAPEVINE-SGYGRKS 189 (265)
T ss_pred hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc---------cccccccccCCCccccChhhhcC-CCCcchh
Confidence 9999999999999999999999999999998653211100 00111234568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||...................++.....+.++.++|++||+.+|.+||++.++++|+|+
T Consensus 190 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999997 77654443333333222233344444566789999999999999999999999999996
No 165
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.2e-35 Score=331.51 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=200.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+|+.||+|+++...... ...++..|+.. ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-------- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec--------
Confidence 47999999999999999999999999999999987543332 33455666664 666799999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++++|.+++.. ...+++..++.++.||+.||+||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 72 --------------------------------EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred --------------------------------CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999998887754 24689999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 611 (1196)
|++ +++||||||+||+++.++.+||+|||+++...... ..+...|+..|+|||.+.+. ..
T Consensus 120 H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQKG 183 (283)
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc----------------ccccccCCccccChhhcCCcccccc
Confidence 998 99999999999999999999999999987542110 11234688999999988652 24
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++|+|||||++|+|++ ||...... +....... ...+.. ....+.++.++|.+||..+|.+||++.++++|
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6889999999999999996 76543221 22222211 111111 12356789999999999999999999999999
Q ss_pred cCCCCchHH
Q 000993 687 ALPPQMEYE 695 (1196)
Q Consensus 687 ~~~~~~~~~ 695 (1196)
+|+.....+
T Consensus 262 ~~~~~~~~~ 270 (283)
T cd06617 262 PFFELHLSK 270 (283)
T ss_pred chhhhcccc
Confidence 999876543
No 166
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.2e-35 Score=336.15 Aligned_cols=252 Identities=26% Similarity=0.423 Sum_probs=203.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||++.+..++..||+|.+.... ......++.+|+++++.++||||++++++|..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--------- 70 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 47999999999999999999999999999999987432 33345678899999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+ +
T Consensus 71 -------------------------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 71 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred -------------------------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 356899999997 5999999888889999999999999999999998 5
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+|||++.++.+||+|||++...... ......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di 181 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYTVQSDI 181 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCCCccccccc-----------------ccccCCCCcCccChhHhcC-CCCCccchH
Confidence 9999999999999999999999999998653211 1133578999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------------------CCCCCcc--ccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------------------GELPPSW--VAKF 659 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------------------~~~p~~~--~~~~ 659 (1196)
|||||++|+|++ ||......... ...... ...++.. ...+
T Consensus 182 wslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T cd06615 182 WSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC
Confidence 999999999997 66433322111 100000 0000110 1245
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+++++||.+||..||++|||+.++++|+|+.+.
T Consensus 261 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 261 DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 678999999999999999999999999999764
No 167
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.8e-35 Score=343.19 Aligned_cols=267 Identities=24% Similarity=0.395 Sum_probs=210.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.++.+|+.||+|++............+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG------- 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-------
Confidence 6899999999999999999999999999999998765444445567889999999999999999987763210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
.....+|+||||++++|.+++.....+++..++.++.||+.||+|||++||
T Consensus 78 -----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 78 -----------------------------ADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred -----------------------------CCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 124578999999999999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||++......... .........|+..|+|||.+.+...++.++||||
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-----------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-----------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 99999999999999999999999999764322110 0011133478999999999876556899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhh-----------------------hcCCCCC-----ccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLK-----------------------QKGELPP-----SWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~-----------------------~~~~~p~-----~~~~~~~~l~~LI~~c 669 (1196)
|||++|||++ ||.............. .....++ .....++++.++|++|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 6644322111110000 0000111 1133467899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCchH
Q 000993 670 MSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
|+.+|.+||++.++++|+|+.+...
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhccC
Confidence 9999999999999999999987653
No 168
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-36 Score=347.98 Aligned_cols=257 Identities=27% Similarity=0.445 Sum_probs=224.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++-...|.+.+.||+|.|++|.+|++..++..||||.|..........+.+.+|+++|+.++|||||+++.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~------ 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE------ 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee------
Confidence 44568899999999999999999999999999999999877666666677999999999999999999998752
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+||||+. |.+.+++...++..+..++.++.|+++|++||
T Consensus 126 ----------------------------------t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYc 171 (596)
T KOG0586|consen 126 ----------------------------------TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYC 171 (596)
T ss_pred ----------------------------------ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHH
Confidence 3568999999995 69999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++|+|||||++||||+.+.++||+|||++.++.... ...+.||++.|+|||++++..+.++.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~----------------~lqt~cgsppyAaPEl~~g~~y~gpe 235 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL----------------MLQTFCGSPPYAAPELFNGKKYDGPE 235 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeecccc----------------cccccCCCCCccChHhhcCcccCCcc
Confidence 99999999999999999999999999999998875332 12467999999999999998777899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|+||+|++||-|++ ||.+..-.+.....+..+..+|... +.++++||+++|-.+|.+|++.+++..|.|..-.
T Consensus 236 ~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m---s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 236 VDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM---SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eehhhhhhhheeeeecccccCCcccccccchheeeeeccccee---echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 999999999999986 9987666555555556566666443 3489999999999999999999999999987643
No 169
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.9e-35 Score=334.56 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=192.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
++|.+.++||+|+||.||+|.+.. ++..||+|++... .......++.+|+.+|+.++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578999999999999999998642 3457999998643 23334567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 514 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 514 (1196)
+++++.+ ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 84 LLGVCVD----------------------------------------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred EEEEEec----------------------------------------CCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 9998743 235799999996 59999886432
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCC
Q 000993 515 ----------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 584 (1196)
Q Consensus 515 ----------~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 584 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---------- 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---------- 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----------
Confidence 367788999999999999999999999999999999999999999999999975432110
Q ss_pred CCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHH---hhhc--CCCCCc
Q 000993 585 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSD---LKQK--GELPPS 654 (1196)
Q Consensus 585 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~---l~~~--~~~p~~ 654 (1196)
........++..|||||++.+ ..++.++|||||||++|||++ ||......+..... .... ...+..
T Consensus 194 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05096 194 ---YRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR 269 (304)
T ss_pred ---eEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence 011123356789999999877 568999999999999999974 66654433322111 1111 111112
Q ss_pred cccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 655 ~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
....++.+.+||.+||+.||.+|||+.+|.+
T Consensus 270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 2345678999999999999999999999965
No 170
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.2e-35 Score=332.80 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=202.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+|+.||+|+++...........+.+|+.+++.++ ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 4789999999999999999999999999999998765443334467889999999995 699999998874321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 75 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 75 -----------------------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred -----------------------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123457999999999998887643 358999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||++||+||||||+||+++. ++.+||+|||+++.+.... .......+++.|+|||++.+...++
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~ 190 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV---------------KSYTHEIVTLWYRAPEVLLGSTHYS 190 (295)
T ss_pred HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc---------------cccCCcccccCCCChHHhhCCCCCC
Confidence 99999999999999999998 8899999999987542211 0112335788999999987655689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------CC--------CccccCCHHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP--------PSWVAKFSEQESL 665 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p--------~~~~~~~~~l~~L 665 (1196)
.++|+||||+++|+|++ ||.................. .+ ......++++.++
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 99999999999999997 66554433332222111000 00 0112356688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|.+||..||.+||++.+++.|+|++
T Consensus 271 i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 271 LQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHccCChhhcCCHHHHhcCCCcC
Confidence 9999999999999999999999984
No 171
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-35 Score=329.07 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--------
Confidence 3689999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 78 --------------------------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999997 58999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||||+||+++.++.+||+|||+++...... .......|++.|+|||.+.+ ...++.++
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 190 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC 190 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCccceeecccc---------------cccCccccCccccCHhHcccccCCCCcchh
Confidence 99999999999999999999999999997643111 01233468899999998853 23478899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|||||||++|||++ ||...................+ ......+..+.+||++||+.+|.+|||++++++|+|
T Consensus 191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999986 6654433222211111111111 112234578999999999999999999999999976
No 172
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.3e-35 Score=328.45 Aligned_cols=256 Identities=22% Similarity=0.402 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|++.+.||+|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ +||||++++++|.....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP----- 77 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-----
Confidence 467888999999999999999999999999999875432 345688899999998 79999999998854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|++|||++ ++|.+++... ..+++..+..++.||+.||+|||
T Consensus 78 -----------------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 78 -----------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred -----------------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012356899999997 5999988753 46899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 612 (1196)
+++|+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+. ..+
T Consensus 129 ~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 129 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------ccCCcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999987542111 012345789999999998631 347
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+.++|||||||++|||++ ||.............. ...........+..+.+||.+||..||.+|||+.+++.|+||
T Consensus 194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 889999999999999997 6655444333322222 111111223455689999999999999999999999999997
No 173
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.9e-35 Score=334.98 Aligned_cols=275 Identities=28% Similarity=0.444 Sum_probs=214.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------- 71 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------- 71 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee---------
Confidence 47899999999999999999999899999999997654332 34567889999999999999999998762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....|++|||+. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 72 -------------------------------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred -------------------------------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 4999988754 56999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC--CC------------CCCCCccccCcCccccccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--FP------------TDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
++|++||||||+||+++.++.++|+|||++............. .. ..............||..|+|
T Consensus 121 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a 200 (316)
T cd05574 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA 200 (316)
T ss_pred HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC
Confidence 9999999999999999999999999999997653221100000 00 000000112234578999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
||++.+ ..++.++||||||+++|+|++ ||...................+. ....+..+.++|++||..||.+|||
T Consensus 201 PE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 201 PEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG-SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred HHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC-ccccCHHHHHHHHHHccCCHhHCCC
Confidence 999987 568999999999999999996 77655554444443332222222 2225678999999999999999999
Q ss_pred ----HHHHHhccCCCCchHHHH
Q 000993 680 ----ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 680 ----a~eiL~~~~~~~~~~~~~ 697 (1196)
++++++|+||.+..+..+
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~ 300 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALI 300 (316)
T ss_pred chhhHHHHHcCchhhcCChhhc
Confidence 999999999998776533
No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.4e-35 Score=324.64 Aligned_cols=251 Identities=26% Similarity=0.449 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.+..+++.+|+|++...... ....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLR--------- 71 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEe---------
Confidence 6899999999999999999999989999999999754332 45778999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 72 -------------------------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 898888766 7899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~ks 616 (1196)
|++|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. +.++.++
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~ 185 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKC 185 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhh---------------hccccccCCccccCchhhcccccCCcCchh
Confidence 99999999999999999999999999997653211 011234688899999998763 2678999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|+|||||++|||++ ||.................. ........+.++.++|++||..+|.+|||+.+++.|+|
T Consensus 186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999997 77655443333322221111 11122234567899999999999999999999999987
No 175
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.8e-35 Score=332.39 Aligned_cols=254 Identities=27% Similarity=0.445 Sum_probs=201.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.++.+++.||+|++..........+.+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR---------- 70 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----------
Confidence 4789999999999999999999989999999988654444344567889999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....|+||||+++ .|..+......+++.+++.++.||+.||+|||+.|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 71 ------------------------------RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred ------------------------------cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 24568999999986 56666666667999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||++..+.... ...+...++..|+|||++.+...++.++|||
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------cccCcccceeeccCcHHhccccccCchHhHH
Confidence 9999999999999999999999999987643211 1123356889999999988655678999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCC---------CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP---------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p---------~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||......+.......... ..+ ..+...+..+.+|+.+
T Consensus 186 slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07846 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ 265 (286)
T ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHH
Confidence 99999999997 5543332221111111000 000 0122345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.+|.+||++.++++|+||
T Consensus 266 ~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 266 CLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhcCCcccchhHHHHhcCCCC
Confidence 999999999999999999997
No 176
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.9e-35 Score=329.53 Aligned_cols=254 Identities=30% Similarity=0.464 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH---------- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----------
Confidence 5889999999999999999999999999999998665444456789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||++|+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 71 ------------------------------GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ------------------------------CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 456799999997799998864 4569999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||||+||+++.++.++|+|||++........ .......|+..|+|||.+.+...++.++||||
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 186 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--------------CccccccCcccccCceeeeccccCCchhHHHH
Confidence 9999999999999999999999999976532110 11223478999999999876556789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CC--------CccccCCHHHHHHHHHcc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p--------~~~~~~~~~l~~LI~~cL 670 (1196)
|||++|||++ ||....+.......+..... .+ .........+.++|++||
T Consensus 187 lG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (286)
T cd07832 187 VGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLL 266 (286)
T ss_pred HHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHh
Confidence 9999999997 44433332222211111000 00 011233467899999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||++++++|+||
T Consensus 267 ~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 267 VYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred ccChhhCCCHHHHhhCcCc
Confidence 9999999999999999997
No 177
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.1e-34 Score=324.41 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.+..+|..||||++...... ......+.+|+.+++.++||||++++++|.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 5899999999999999999999999999999998654322 23346788999999999999999999887331
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|++|||++ ++|.+++.....+++..+..++.|++.||+|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 77 ---------------------------------MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ---------------------------------CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 589999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++|+||||+||+++.++.++|+|||+++......... .......|+..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (265)
T cd06652 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSG------------TGMKSVTGTPYWMSPEVISG-EGYGRKA 190 (265)
T ss_pred hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccc------------cccccCCCCccccChhhhcC-CCCCcch
Confidence 9999999999999999999999999999997643211000 01223468899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|+|||||++|||++ ||.............. ....+......+..+.++|++||. +|.+||+++++++|+|+.
T Consensus 191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999999999996 7765544333332222 222232333445678899999995 999999999999999874
No 178
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.5e-35 Score=326.10 Aligned_cols=257 Identities=27% Similarity=0.456 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|...+.||+|+||.||+|.+..++..||+|++...... ......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR----- 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----
Confidence 4788899999999999999999999999999998754322 23345788999999999999999999876431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||++ ++|.+++.....+++...+.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 77 ---------------------------------AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred ---------------------------------CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1356799999997 489999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|+||||||+||+++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------GTGIRSVTGTPYWMSPEVISG-EGYGRKA 190 (266)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc------------CCccccCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999764321100 001123458899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|||||||++|||++ ||.............. ....|.......+.++++| +||..+|.+||+++++++||||+
T Consensus 191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999999999997 7765544443332222 2222222233456788888 67778999999999999999986
No 179
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.4e-35 Score=330.15 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=204.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~---------- 73 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY---------- 73 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----------
Confidence 367889999999999999999999999999988643 23445678899999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||+++ +|..++.. ..++++..++.++.||+.||+|||+.|
T Consensus 74 ------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 74 ------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467999999975 77777654 457999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDEK 615 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~k 615 (1196)
++||||||+|||++.++.+||+|||++....... .......+|+.|+|||++.. ...++.+
T Consensus 124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 188 (282)
T cd06643 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188 (282)
T ss_pred eeecCCCcccEEEccCCCEEEccccccccccccc---------------cccccccccccccCHhhccccCCCCCCCCcc
Confidence 9999999999999999999999999987542110 01223468999999999852 2347789
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|||||||++|||++ ||..........................+.++.++|.+||+.||.+||++.++++|+|+...
T Consensus 189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999999999996 77665554444443332222222223456789999999999999999999999999998765
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
..
T Consensus 269 ~~ 270 (282)
T cd06643 269 SN 270 (282)
T ss_pred CC
Confidence 43
No 180
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.3e-35 Score=343.67 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=203.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|.....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 89 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKS---- 89 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCC----
Confidence 3478999999999999999999999999999999986544444455678899999999999999999988743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
..+...+|+|||||+++|.+.+... +++..+..++.||+.||+|||++
T Consensus 90 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~ 137 (353)
T cd07850 90 ------------------------------LEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA 137 (353)
T ss_pred ------------------------------ccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC
Confidence 0123467999999999999888654 89999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++||
T Consensus 138 gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 200 (353)
T cd07850 138 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 200 (353)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------CCCCCcccccccCHHHHhC-CCCCCchhh
Confidence 99999999999999999999999999997542111 1233468899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------------------CCCc----c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------------------LPPS----W 655 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------------------~p~~----~ 655 (1196)
|||||++|+|++ ||............+...+. .+.. .
T Consensus 201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence 999999999996 66543322111111100000 0000 0
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
...++.+.++|.+||+.||.+|||+.++|+|+|+..
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 112346789999999999999999999999998874
No 181
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.5e-35 Score=331.10 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--------- 73 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec---------
Confidence 5799999999999999999999989999999998743 33345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|.+++... ..+++..++.++.|++.||.|||++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 74 -------------------------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred -------------------------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999975 898888764 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
||+||||||+||+++.++.++|+|||++....... .......||+.|+|||.+.. ...++.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 187 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---------------QKRDTFIGTPYWMAPEVVACETFKDNPYDY 187 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccc---------------cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999987542111 11233568999999999753 134678
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|+|||||++|||++ ||..........................+.++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 9999999999999997 7766554444333322211111122345678999999999999999999999999999987
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 53
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.9e-35 Score=329.69 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------- 70 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE---------
Confidence 4688899999999999999999999999999998743 233445678999999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....++||||+++ +|..+ ..+++..+..++.||+.||+|||++|
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 71 -------------------------------ENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred -------------------------------CCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467899999986 55433 35788999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|+||||+|||++.++.+||+|||++..+... .....+||+.|+|||++.+ ..++.++|+|
T Consensus 116 i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 177 (279)
T cd06619 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----------------IAKTYVGTNAYMAPERISG-EQYGIHSDVW 177 (279)
T ss_pred EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------cccCCCCChhhcCceeecC-CCCCCcchHH
Confidence 999999999999999999999999999754211 1234578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHH------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQ------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
||||++|+|++ ||....... ...................++++.++|.+||+.||.+||+++++++|+|+.
T Consensus 178 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred HHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 99999999997 665422110 111111111111111223567899999999999999999999999999998
Q ss_pred CchHH
Q 000993 691 QMEYE 695 (1196)
Q Consensus 691 ~~~~~ 695 (1196)
+....
T Consensus 258 ~~~~~ 262 (279)
T cd06619 258 QYNDG 262 (279)
T ss_pred cccCc
Confidence 76543
No 183
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-34 Score=321.90 Aligned_cols=250 Identities=33% Similarity=0.532 Sum_probs=208.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+.++.||.|+||.||.+++..+++.+++|.+.....+.....++.+|+.++++++||||+++++++.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------- 70 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD---------- 70 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----------
Confidence 5889999999999999999999999999999998766555666788999999999999999999998843
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++++||||+ ++|.+++... ..+++.++..++.|++.||+|||+.
T Consensus 71 ------------------------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 71 ------------------------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred ------------------------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 5999998764 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------~~~~~~~~~~y~ape~~~~-~~~~~~~Dv 184 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---------------MAETVVGTPYYMSPELCQG-VKYNFKSDI 184 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc---------------cccccCCCccccCHhhcCC-CCCCCcchh
Confidence 999999999999999999999999999975432110 1233568999999999887 458899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||+++|||++ ||......+....... +..++.....+.++.++|.+||..+|.+||++.++++|+|+
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999996 6665544444433332 23333334556789999999999999999999999999875
No 184
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.4e-35 Score=332.16 Aligned_cols=258 Identities=28% Similarity=0.469 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||+|++|.||+|.++.+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------- 72 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--------
Confidence 368999999999999999999999999999999987554433344678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..+.|+||||++++|.+.+..... +++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 120 (294)
T PLN00009 73 --------------------------------EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120 (294)
T ss_pred --------------------------------CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999888865443 5788899999999999999999
Q ss_pred CCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++++||||||+||+++. ++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 185 (294)
T PLN00009 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---------------RTFTHEVVTLWYRAPEILLGSRHYSTPV 185 (294)
T ss_pred CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---------------cccccCceeecccCHHHHhCCCCCCcHH
Confidence 99999999999999985 4579999999997542110 0112346789999999987645688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------C---CC-----ccccCCHHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------L---PP-----SWVAKFSEQESLLR 667 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------~---p~-----~~~~~~~~l~~LI~ 667 (1196)
|||||||++|+|++ ||.................. . ++ .....++.+.++|.
T Consensus 186 Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (294)
T PLN00009 186 DIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLS 265 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHH
Confidence 99999999999997 66544433333322111000 0 00 01234567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.+|.+||++.++++|+||...
T Consensus 266 ~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 266 KMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred HHccCChhhCcCHHHHhcCchHhHH
Confidence 9999999999999999999998764
No 185
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.2e-35 Score=330.34 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=204.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|+..+.||+|+||+||+|.+..+++.||+|++....... .....+.+|+.+|+.++|+||+++++++..
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~---------- 71 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET---------- 71 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec----------
Confidence 678899999999999999999999999999987543222 223457889999999999999999887632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||+.
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 72 ------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred ------------------------------CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 4888877543 3699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++....... ......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~~~aPE~~~~-~~~~~~~Di 184 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------SIRGRVGTVGYMAPEVLNN-QRYTLSPDY 184 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----------------cccCCCCCcCccChHHhcC-CCCCcccch
Confidence 99999999999999999999999999986532110 1123478999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~ 689 (1196)
|||||++|||++ ||.................. .+......++++.+|+.+||+.||.+||+ +.+++.|+||
T Consensus 185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 999999999996 87655433222111111111 11122345668899999999999999999 8999999999
Q ss_pred CCchHH
Q 000993 690 PQMEYE 695 (1196)
Q Consensus 690 ~~~~~~ 695 (1196)
......
T Consensus 265 ~~~~~~ 270 (285)
T cd05632 265 RNMNFK 270 (285)
T ss_pred hcCCHH
Confidence 998665
No 186
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.5e-35 Score=332.18 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=202.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+..+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--------- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec---------
Confidence 377889999999999999999999999999998754322 2223457789999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05630 72 -------------------------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120 (285)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 5898888543 358999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.||+||||||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----------------cccCCCCCccccChHHHcC-CCCCCccc
Confidence 999999999999999999999999999986532110 1123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
+|||||++|+|++ ||...... ........... .......++++.+|+++||+.||.+||| ++++++|
T Consensus 184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ--EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 9999999999996 77643221 11111111000 1122345678999999999999999999 9999999
Q ss_pred cCCCCchHH
Q 000993 687 ALPPQMEYE 695 (1196)
Q Consensus 687 ~~~~~~~~~ 695 (1196)
+||.+..+.
T Consensus 262 ~~~~~~~~~ 270 (285)
T cd05630 262 PLFKQINFK 270 (285)
T ss_pred hhhhccCHH
Confidence 999886555
No 187
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.1e-35 Score=331.64 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=205.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+++++||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 80 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--------- 80 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe---------
Confidence 5689999999999999999999999999999998643 33456778899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|..++.+ ...+++..++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 81 -------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3467999999975 77776654 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+ ...++.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 194 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------cccceecCCccccCceeeccccccCCCCCc
Confidence 99999999999999999999999999986532110 11233468899999999853 234688
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||..........................+.++.++|++||..||.+||+++++++|+|+..
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 9999999999999997 7765544443333322111111222345678999999999999999999999999999987
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
....
T Consensus 275 ~~~~ 278 (292)
T cd06644 275 VTSN 278 (292)
T ss_pred cccc
Confidence 6543
No 188
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=7.4e-35 Score=330.33 Aligned_cols=254 Identities=25% Similarity=0.425 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 73 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIH--------- 73 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEe---------
Confidence 47899999999999999999999989999999998754322 22345678999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+.|+||||++++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 122 (291)
T cd07844 74 -------------------------------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122 (291)
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 24578999999999999988754 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv 187 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM 187 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------ccccccccccccCCcHHhhcCcccCcHHHH
Confidence 99999999999999999999999999987532111 011223568899999998765568899999
Q ss_pred HHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCC----------------------C-CC----ccccCC--HHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGE----------------------L-PP----SWVAKF--SEQESL 665 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~----------------------~-p~----~~~~~~--~~l~~L 665 (1196)
|||||++|+|++ ||..... .+........... . +. ...... .++.++
T Consensus 188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence 999999999996 6654331 1111111000000 0 00 001122 677899
Q ss_pred HHHcccCCCCCCCCHHHHHhccCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|.+||+.+|.+|||+.++++|+||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999997
No 189
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9.8e-35 Score=324.65 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=204.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-------hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
|.+...||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 567789999999999999999899999999887543321 123568899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+.+++|||+++ +|.+++.....+++..+..++.|++.||+|
T Consensus 78 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 78 ------------------------------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred ------------------------------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 3467899999975 899999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++......... ..........|++.|+|||.+.+ ..++.
T Consensus 122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~~pe~~~~-~~~~~ 191 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST---------KTNGARPSLQGSVFWMAPEVVKQ-TSYTR 191 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC---------CccccccccCCCcCccChhHhcc-CCCCc
Confidence 999999999999999999999999999999998654221100 00011223468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
++|+|||||++|+|++ ||.............. ...+......+..+.++|++||+.||.+||++.++++|+||
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999996 7766544333332222 22333334456789999999999999999999999999986
No 190
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.3e-35 Score=332.66 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||.||+|.+..+|+.||||+++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH------- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------
Confidence 478889999999999999999989999999999765433 3344567789999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+||||+.++|.+++.... .+++..++.++.||++||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~ 120 (298)
T cd07841 74 ---------------------------------KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120 (298)
T ss_pred ---------------------------------CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999889999998766 79999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+|+||||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+...++.++|
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 185 (298)
T cd07841 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---------------RKMTHQVVTRWYRAPELLFGARHYGVGVD 185 (298)
T ss_pred CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------ccccccccceeeeCHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999997653211 01122356889999999876556889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--------------------~p-----~~~~~~~~~l~~LI~~c 669 (1196)
+|||||++|||++ ||....+............. .+ ..+...+..+.++|.+|
T Consensus 186 v~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (298)
T cd07841 186 MWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRL 265 (298)
T ss_pred HHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHH
Confidence 9999999999997 34333322221111110000 00 01122346788999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||.+|||+.++++|+||.+..
T Consensus 266 l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 266 LTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hcCCcccCcCHHHHhhCccccCCC
Confidence 999999999999999999998754
No 191
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5e-35 Score=324.39 Aligned_cols=249 Identities=27% Similarity=0.472 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|++..+++.||+|.++.... ...+.+|+.+++.++||||+++++.+.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------- 69 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFK--------- 69 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeec---------
Confidence 689999999999999999999998899999999864321 5689999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+++ +|.+++.. ...+++..++.++.|++.||.|||+.
T Consensus 70 -------------------------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 70 -------------------------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred -------------------------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999975 89998875 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||+|+||+++.++.+||+|||++....... .......|+..|+|||++.+ ..++.++||
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di 182 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNNKADI 182 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccccchhcccCc---------------cccccccCCccccCHHHHhc-CCCCchhhH
Confidence 99999999999999999999999999998653221 01123457889999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||..........................+..+.++|.+||+.||.+|||+.++++|+|+
T Consensus 183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999997 66654443333222211111111222345688999999999999999999999999996
No 192
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-34 Score=330.97 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=205.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.|..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--------- 88 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEe---------
Confidence 689999999999999999999999999999999875443 234678899999999999999999988742
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++ ++|.+++.. ..+++.++..++.|++.||+|||++|
T Consensus 89 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred -------------------------------CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346899999997 589888754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 200 (296)
T cd06654 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (296)
T ss_pred cccCCCCHHHEEEcCCCCEEECccccchhccccc---------------cccCcccCCccccCHHHHcC-CCCCccchHH
Confidence 9999999999999999999999999987543211 01123468999999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||++|+|++ ||....................+.....++.+.++|.+||..||.+||++.++++|+|+..
T Consensus 201 s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 99999999997 7765554333322222111111223345678999999999999999999999999999864
No 193
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.8e-35 Score=329.59 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=201.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|++|.||+|.++.+|..||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~----------- 69 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS----------- 69 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----------
Confidence 567889999999999999999999999999997654444445678899999999999999999988632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||++++|.+++.... .+++..++.++.||+.||+|||++++
T Consensus 70 -----------------------------~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 70 -----------------------------ENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred -----------------------------CCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 35789999999989999987665 79999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||+|+||+++.++.++|+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 185 (283)
T cd07835 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS 185 (283)
T ss_pred eCCCCCHHHEEEcCCCcEEEeecccccccCCCc---------------cccCccccccCCCCCceeecCcccCcHHHHHH
Confidence 999999999999999999999999997542211 01123357889999998876455789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHccc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+++|+|++ ||................. .........++.+.++|.+||+
T Consensus 186 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (283)
T cd07835 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265 (283)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhc
Confidence 9999999997 6654433222222111000 0001122345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
.||.+|||+.++++|+||
T Consensus 266 ~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 266 YDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChhhCcCHHHHhcCCCC
Confidence 999999999999999997
No 194
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-34 Score=330.88 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=208.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++.++||.|+||.||+|.++.+++.||||++............+.+|+++++.++||||+++++.+.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD---- 81 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc----
Confidence 3689999999999999999999999999999999987654433334467789999999999999999987754310
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
........+|++|||++++|...+.. ...+++..++.++.||++||+|||+
T Consensus 82 ----------------------------~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 82 ----------------------------KSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ----------------------------cccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00123457899999999988887765 3479999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++........... .........+...|++.|+|||.+.+...++.++|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG----GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc----CCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 99999999999999999999999999999865432211000 00001112344578999999999876556899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------------CCC----ccccCCHHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LPP----SWVAKFSEQESLLR 667 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p~----~~~~~~~~l~~LI~ 667 (1196)
||||||++|||++ ||.................. .++ .+....+.+.++|.
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999997 55544333322221111000 000 01223357889999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||.+|||+.+++.|+||
T Consensus 290 ~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 290 KLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHcccCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
No 195
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.3e-34 Score=321.52 Aligned_cols=250 Identities=31% Similarity=0.591 Sum_probs=206.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----------- 69 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----------
Confidence 588999999999999999999999999999999765444445568899999999999999999998762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....|+||||+. ++|.+.+.... .+++.+++.++.|++.||+|||++
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 70 -----------------------------ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred -----------------------------CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2357899999996 58999887543 588999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||+|+||+++.++.++|+|||++........ ......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv 184 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---------------LARTCIGTPYYLSPEICEN-RPYNNKSDI 184 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---------------hhhhccCCccccCHHHhCC-CCCCCccch
Confidence 999999999999999999999999999975432110 0122458889999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||......+.....+. +..++.....+.++.++|.+||+.+|.+||++.++++|+||
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred hHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999997 6665555544444433 23333334556789999999999999999999999999996
No 196
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.4e-35 Score=326.13 Aligned_cols=247 Identities=18% Similarity=0.246 Sum_probs=196.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++ ..+..||+|.++.. .+......+.+|+..++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------ 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec------
Confidence 57899999999999999999875 34678999998743 333445678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||||+++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 78 ----------------------------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred ----------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3457999999975 888888764 5789999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+|||++.++.+|++|||.+....... ........++..|+|||.+.+ ..++.+
T Consensus 124 H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--------------IYTTMSGKSPVLWAAPEAIQY-HHFSSA 188 (266)
T ss_pred HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--------------hhcccCCCCceeecCHHHHhh-CCccch
Confidence 99999999999999999999999999999876431110 001122345678999999887 578999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||||||++||+++ ||.......... .+. ....++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIK-AVE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999774 776554443322 222 22233334456678999999999999999999999986
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-34 Score=327.24 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||+++++++....
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----- 88 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD----- 88 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-----
Confidence 478999999999999999999999999999999875322 2345678899999999 6999999999875421
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....++|++|||++ ++|.+++.. ...+++..++.++.||+.||.
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 89 ------------------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 012457899999997 588887652 346899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---- 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 609 (1196)
|||+++++||||||+||+++.++.+||+|||+++...... .......|++.|+|||++...
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQLD 203 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC---------------CccccccCCCcccChhhhchhhhcc
Confidence 9999999999999999999999999999999987643211 011234689999999988531
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++.++|||||||++|||++ ||..........................+..+.++|.+||+.||.+|||+.++++|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 347889999999999999996 67655443332222111111111112235679999999999999999999999999
Q ss_pred cCC
Q 000993 687 ALP 689 (1196)
Q Consensus 687 ~~~ 689 (1196)
+|+
T Consensus 284 ~~~ 286 (286)
T cd06638 284 VFI 286 (286)
T ss_pred ccC
Confidence 986
No 198
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=346.40 Aligned_cols=250 Identities=27% Similarity=0.389 Sum_probs=199.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-C-----CCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H-----QHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-H-----pnIV~l~~~~~e~~~~ 455 (1196)
+|++++.||+|+||.|.+|.+..|++.||||+++.. .....+-..|+.+|..|+ | -|+|+++++|..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f---- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF---- 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----
Confidence 789999999999999999999999999999999743 345667788999999996 4 489999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~ 533 (1196)
..++|||+|.+..+|++++..+. .|+...++.|+.||+.||.
T Consensus 260 ------------------------------------r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~ 303 (586)
T KOG0667|consen 260 ------------------------------------RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALL 303 (586)
T ss_pred ------------------------------------ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999999998654 6999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCC--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
+||..||||+||||+||||.+. ..+||+|||.|+..... ..+++-+..|.|||++.| ..
T Consensus 304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~------------------vytYiQSRfYRAPEVILG-lp 364 (586)
T KOG0667|consen 304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR------------------VYTYIQSRFYRAPEVILG-LP 364 (586)
T ss_pred HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc------------------ceeeeeccccccchhhcc-CC
Confidence 9999999999999999999764 46999999999875321 124577889999999999 57
Q ss_pred CCCcchhHHHHHHHHHhhc--CCch-hHHHHHHHHHhh------------------------------------------
Q 000993 612 IDEKADMYSLGIVFFELWH--PFST-AMERQIVLSDLK------------------------------------------ 646 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt--Pf~~-~~~~~~~~~~l~------------------------------------------ 646 (1196)
|+.+.||||||||+.||++ |+.+ ..+.+....++.
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~ 444 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP 444 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence 9999999999999999997 4332 222222111110
Q ss_pred ----------hcCCCCCccc---cC-----CHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 647 ----------QKGELPPSWV---AK-----FSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 647 ----------~~~~~p~~~~---~~-----~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.....|+... .. -..+.++|++||..||.+|+|+.++|+|||+....
T Consensus 445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 0000111000 00 02357999999999999999999999999998653
No 199
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.4e-35 Score=345.64 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++ ..++..||||+++... .....+.+.+|+.+|+.+ +|||||+++++|.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999975 3456789999986433 233456788999999999 89999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 514 (1196)
....|+|||||+ |+|.+++....
T Consensus 111 --------------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd05104 111 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYK 152 (375)
T ss_pred --------------------------------------CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHH
Confidence 335689999996 58988885421
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 515 ---------------------------------------------------------HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 515 ---------------------------------------------------------~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+++..++.++.||+.||+|||+
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 232 (375)
T cd05104 153 NLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232 (375)
T ss_pred hhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|
T Consensus 233 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD 298 (375)
T cd05104 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------YVVKGNARLPVKWMAPESIFN-CVYTFESD 298 (375)
T ss_pred CCeeccCCchhhEEEECCCcEEEecCccceeccCccc-------------ccccCCCCCCcceeChhHhcC-CCCCCCCC
Confidence 9999999999999999999999999999976432110 000112345678999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||............+. ....+......+.++++||.+||+.||++|||+.++++.
T Consensus 299 i~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 299 VWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999985 6765443333333333 222222223345689999999999999999999999874
No 200
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8e-36 Score=358.57 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+..+.||+|+||+||+|+... ....||||.++.. .+.....+|.||+++|+.|+|||||+++|+|.+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 567778999999999999998752 3467999988633 333467899999999999999999999999954
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------C----CCHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------H----FDKEL 520 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~----l~e~~ 520 (1196)
..-+|+|+|||. |+|.++|.... . ++..+
T Consensus 561 ------------------------------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q 604 (774)
T KOG1026|consen 561 ------------------------------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQ 604 (774)
T ss_pred ------------------------------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHH
Confidence 456799999996 89999996431 2 78889
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 521 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
.+.++.|||.||.||-++.+|||||..+|+||.++..|||+|||+++.+...++.+ ......-..+|
T Consensus 605 ~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk-------------~~~~t~lPIRW 671 (774)
T KOG1026|consen 605 FLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYK-------------VRGNTLLPIRW 671 (774)
T ss_pred HHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhc-------------ccCCceeeeec
Confidence 99999999999999999999999999999999999999999999999765443221 11122346799
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
||||.+.. ++|+.++|||||||+|||+++ |+.+..+.++...+. .+...+-+..+++++++||..||+.+|.+
T Consensus 672 MppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~ 748 (774)
T KOG1026|consen 672 MPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--AGQLLSCPENCPTEVYSLMLECWNENPKR 748 (774)
T ss_pred CCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--cCCcccCCCCCCHHHHHHHHHHhhcCccc
Confidence 99999887 689999999999999999996 999988887765543 33445555677889999999999999999
Q ss_pred CCCHHHHHh
Q 000993 677 RPSATELLQ 685 (1196)
Q Consensus 677 RPta~eiL~ 685 (1196)
||++.+|-.
T Consensus 749 RPsF~eI~~ 757 (774)
T KOG1026|consen 749 RPSFKEIHS 757 (774)
T ss_pred CCCHHHHHH
Confidence 999999853
No 201
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-34 Score=330.03 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 87 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--------- 87 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec---------
Confidence 579999999999999999999999999999999875432 335678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|..++.. ..+++.++..++.|++.||+|||++|
T Consensus 88 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 88 -------------------------------GDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred -------------------------------CceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999975 88887754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+|
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 199 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 199 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhccccc---------------ccCCCcCCCccccCcchhcC-CCCCchhhHH
Confidence 9999999999999999999999999987643211 01123468899999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++|+|++ ||..........................++.+.++|++||..||.+||++.++++|+|+...
T Consensus 200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 99999999997 77665544333332221211222334566789999999999999999999999999998753
No 202
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.9e-34 Score=320.48 Aligned_cols=252 Identities=35% Similarity=0.619 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|.+..+|+.||+|.+...........++.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR--------- 71 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---------
Confidence 58899999999999999999999999999999976655556667889999999999999999999876431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 72 -----------------------------~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 72 -----------------------------SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred -----------------------------CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 2346799999997 589988865 357999999999999999999999
Q ss_pred -----hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 537 -----GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 -----s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
+.+++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~pE~~~~-~~ 186 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------SFAKTYVGTPYYMSPEQLNH-MS 186 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------ccccccccCCCccChhhhcC-CC
Confidence 9999999999999999999999999999998653211 01123468999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|+||||+++|+|++ ||........... .. ....+......++.+.+++.+||+.+|.+||++.+|++|||
T Consensus 187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASK-IK-EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHH-Hh-cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 8899999999999999996 7765543332222 22 33333333455678999999999999999999999999998
Q ss_pred C
Q 000993 689 P 689 (1196)
Q Consensus 689 ~ 689 (1196)
.
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 4
No 203
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1e-34 Score=337.08 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS------ 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc------
Confidence 368999999999999999999999999999999986432 2234567889999999999999999998763321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 77 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 77 -----------------------------FESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred -----------------------------ccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 012346799999999999887754 56999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+...++.++|||
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 194 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW 194 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence 999999999999999999999999999764321100 00123357899999999876645689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhh----------------------h----cCCCC--CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLK----------------------Q----KGELP--PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~----------------------~----~~~~p--~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||.............. . ....+ ......++++.++|.+
T Consensus 195 slGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (336)
T cd07849 195 SVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDK 274 (336)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHH
Confidence 99999999997 6643322111100000 0 00000 0112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++++|+|+.+..
T Consensus 275 ~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 275 MLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HcCCChhhCcCHHHHhcCccccccC
Confidence 9999999999999999999998653
No 204
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-34 Score=326.68 Aligned_cols=252 Identities=25% Similarity=0.435 Sum_probs=201.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|++|.||+|+++.+|+.||||+++.... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 69 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHT---------- 69 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEee----------
Confidence 58999999999999999999999999999999875432 2234567789999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..+..++.||+.||+|||+.
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (284)
T cd07836 70 ------------------------------ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119 (284)
T ss_pred ------------------------------CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999888654 3589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||++++++.++|+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 184 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---------------cccccccccccccChHHhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~~l~~LI~~c 669 (1196)
|||||++|+|++ ||......+......... ...|. .....++.+.++|.+|
T Consensus 185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 264 (284)
T cd07836 185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence 999999999997 665444333222211110 00010 0112356788999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+||++.++++|+||
T Consensus 265 l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 265 LQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 205
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.1e-34 Score=326.83 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=197.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|.++.+|+.||+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--------- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--------- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec---------
Confidence 6899999999999999999999999999999998754322 223457789999999999999999988632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 75 -------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 75 -------------------------------KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred -------------------------------CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346799999999888877654 356888899999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 188 (291)
T cd07870 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188 (291)
T ss_pred cccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence 9999999999999999999999999997532111 0112345789999999987645578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHH-HHHhhhcC--------------CC---------CCc------cccCCHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIV-LSDLKQKG--------------EL---------PPS------WVAKFSEQESLL 666 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~-~~~l~~~~--------------~~---------p~~------~~~~~~~l~~LI 666 (1196)
||||++|||++ ||......... .......+ .. +.. .....+.+.+++
T Consensus 189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 268 (291)
T cd07870 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA 268 (291)
T ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence 99999999997 77544332111 11110000 00 000 011245788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCC
Q 000993 667 RRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.+||..||.+|||+.+++.|+||
T Consensus 269 ~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 269 SQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHhCcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999997
No 206
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.3e-34 Score=325.46 Aligned_cols=255 Identities=28% Similarity=0.458 Sum_probs=208.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--------- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE---------
Confidence 46888999999999999999999999999999987543 23445678899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+|+||+++ +|.+++... ++++..++.++.||+.||.|||+++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 71 -------------------------------GSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred -------------------------------CCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3568999999975 899988765 7999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||+++...... .......|++.|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~ 182 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---------------SKRNTFVGTPFWMAPEVIKQ-SGYDEKADIW 182 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccc---------------cccccccCCccccChhhhcc-CCCCchhhHH
Confidence 9999999999999999999999999998654221 01233468899999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
||||++|+|++ ||............... ..+..... .++.+.+++.+||..+|.+|||++++++|+|+......
T Consensus 183 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred HHHHHHHHHHhCCCCcccCchHHHHHHhhhc--CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 99999999997 77654443333222221 12211112 56789999999999999999999999999999886543
No 207
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1e-34 Score=327.60 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=200.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+++|++.+.||+|+||.||+|.+...+ ..||+|.++.. ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC---
Confidence 468899999999999999999987555 68999988643 233445678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
....|++|||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (283)
T cd05048 80 -------------------------------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122 (283)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCC
Confidence 345789999997 5999998754 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++...... .........++
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~-------------~~~~~~~~~~~ 189 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSAD-------------YYRVQSKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccc-------------cccccCCCccc
Confidence 88999999999999999999999999999999999999999999999997542111 00112334678
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||.+.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++++.+|+++||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IR-SRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCcCCCcccCCHHHHHHHHHHccCC
Confidence 89999999887 568999999999999999986 7766555443332 22 33334444566789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999975
No 208
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-34 Score=322.92 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=204.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.++.+++.|++|++..... ....+.+|+.+++++ .||||++++++|.....
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP----- 77 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-----
Confidence 789999999999999999999998999999999875432 346788999999999 79999999999855310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|++|||+++ +|.+++.. ...+++..++.++.|++.||+|
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 78 -----------------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred -----------------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0124678999999975 88888764 3579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----C
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----P 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~ 610 (1196)
||+++++|+||+|+||+++.++.+||+|||++....... .......|++.|+|||++... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------GRRNTFIGTPYWMAPEVIACDEQPDA 193 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch---------------hhhcCccccccccCHhHhcccccccC
Confidence 999999999999999999999999999999987543211 112335689999999987542 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.++.++|||||||+||+|++ ||..........................+..+++||.+||..||.+|||+.++++||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 47889999999999999997 776554444333333221111111122456889999999999999999999999999
Q ss_pred CC
Q 000993 688 LP 689 (1196)
Q Consensus 688 ~~ 689 (1196)
|.
T Consensus 274 ~~ 275 (275)
T cd06608 274 FI 275 (275)
T ss_pred CC
Confidence 85
No 209
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6e-35 Score=344.36 Aligned_cols=251 Identities=22% Similarity=0.303 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++..+| ..||||+++.... ......+.+|+.+++.+ +|||||+++++|.+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 368999999999999999999975444 5799999875432 23456788999999999 89999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 513 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 513 (1196)
...+|+|||||+ |+|.+++...
T Consensus 114 --------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
T cd05106 114 --------------------------------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSS 155 (374)
T ss_pred --------------------------------------CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccc
Confidence 345789999996 5898887532
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 514 ---------------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 514 ---------------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
.++++..+++++.||+.||+|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 156 DYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred cccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 24778889999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++++||+|||+++....... ........+++.|||||++.+ ..++.++||||||
T Consensus 236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG 301 (374)
T cd05106 236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYG 301 (374)
T ss_pred ccCchheEEEeCCCeEEEeeceeeeeccCCcc-------------eeeccCCCCccceeCHHHhcC-CCCCccccHHHHH
Confidence 99999999999999999999999975432110 001112345678999999877 5689999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||............... ...+......++++.++|.+||+.||.+|||+.++++.
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSKFYKMVKR-GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHhCCCCCCccccccHHHHHHHHc-ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999984 77655443333333322 22222222346799999999999999999999999864
No 210
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.8e-34 Score=324.88 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=196.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|++.+.||+|+||.||+|.+..+++.||+|+++....... .....+|+.+++++. ||||+++++++.+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--------- 70 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR--------- 70 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---------
Confidence 6788999999999999999999999999999875433222 234567899999885 99999999887431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++||||++++|.+.+... ..+++..++.++.||+.||+|||+.|+
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 71 -----------------------------KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred -----------------------------CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 12467999999999998888754 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++. +.+||+|||+++.+.... ......+++.|+|||++.....++.++||||
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 184 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKP----------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCC----------------CcCCCCCCcccCChhHhhcCCCCCcchhHHH
Confidence 99999999999999 999999999997643111 1123457899999998765456789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHccc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~~l~~LI~~cL~ 671 (1196)
|||++|||++ ||................ ...|. .....+.++.++|.+||+
T Consensus 185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (282)
T cd07831 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA 264 (282)
T ss_pred HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence 9999999996 675443322221111100 00111 012345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
+||.+||++.++++|+||
T Consensus 265 ~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 265 YDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccCHHHHhhCCCC
Confidence 999999999999999996
No 211
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.4e-35 Score=324.54 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+..+.||.|+||.||+|.++.+++.+|+|.+..... .....++.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--------- 70 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec---------
Confidence 468888999999999999999999999999999875433 2455678999999999999999999987732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG- 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs- 537 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 71 -------------------------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 356899999998 5999999876 789999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.|++|+||||+||+++.++.++|+|||.+....... .....++..|+|||.+.+ ..++.++|
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~y~~PE~~~~-~~~~~~~D 181 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-----------------AKTFVGTSSYMAPERIQG-NDYSVKSD 181 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------hhcccCChhccCHHHHcC-CCCCchhh
Confidence 999999999999999999999999999987653211 011568889999999988 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||+++|+|++ ||.... .......... ....+..... .++++.++|.+||..||.+|||+.+++.|+||
T Consensus 182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 9999999999997 665431 1111111111 1112222122 56789999999999999999999999999999
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
++.+
T Consensus 261 ~~~~ 264 (265)
T cd06605 261 KKYE 264 (265)
T ss_pred hccc
Confidence 7653
No 212
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.4e-36 Score=319.38 Aligned_cols=264 Identities=23% Similarity=0.393 Sum_probs=205.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+..|+.+..||+|.||.||+|..+.++ +.||||+++-............||+.+++.++||||+.+..+|+.+
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 4678999999999999999999766443 3799999976544444566788999999999999999998887542
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa 529 (1196)
...+++++||...+|.++++-. ..++...+..++.||+
T Consensus 100 -------------------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil 142 (438)
T KOG0666|consen 100 -------------------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQIL 142 (438)
T ss_pred -------------------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHH
Confidence 4578999999999999998532 3588999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC----CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+..+-.. . ......+-|.+|.|||.
T Consensus 143 ~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp------l------~s~d~VVVTiWYRAPEL 210 (438)
T KOG0666|consen 143 DGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP------L------ASLDPVVVTIWYRAPEL 210 (438)
T ss_pred hhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc------c------ccCCceEEEEEecChHH
Confidence 99999999999999999999999888 89999999999987644211 1 12234578999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc--CCchhHH-------------HHHHHH------------------------Hhh
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH--PFSTAME-------------RQIVLS------------------------DLK 646 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt--Pf~~~~~-------------~~~~~~------------------------~l~ 646 (1196)
|.|...|+++.||||.|||+.||++ |.....+ ....+. ...
T Consensus 211 LLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~ 290 (438)
T KOG0666|consen 211 LLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFR 290 (438)
T ss_pred hcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhH
Confidence 9998899999999999999999986 3211110 000010 000
Q ss_pred hcCCCCC-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 647 QKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 647 ~~~~~p~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.....+. .+...++...+|+.+||+.||.+|.|++++|+|++|...+
T Consensus 291 ~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 291 RHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0000000 0111234467899999999999999999999999988653
No 213
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.8e-34 Score=318.43 Aligned_cols=249 Identities=30% Similarity=0.547 Sum_probs=204.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+..+.||+|+||.||+|.+..+++.+|||.+............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE---------- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----------
Confidence 5889999999999999999999999999999998665555566789999999999999999999977632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+++||||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 71 ------------------------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3567999999975 999999764 3589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|++||||||+||+++.++ .+||+|||++....... ......|++.|+|||.+.+ ..++.++|
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------KAYTVVGTPCYISPELCEG-KPYNQKSD 183 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----------------cccccccCCcccCchhccC-CCCCcccc
Confidence 999999999999998654 58999999998653211 1123468899999999987 56889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||+++|+|++ ||............... ..++.....++++.+++.+||+.||.+|||+.++++|||+
T Consensus 184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 184 IWALGCVLYELASLKRAFEAANLPALVLKIMSG--TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc--CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999999997 77665544444333322 2222233456789999999999999999999999999985
No 214
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.2e-34 Score=336.72 Aligned_cols=263 Identities=25% Similarity=0.338 Sum_probs=206.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|++..+|+.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~------ 77 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH------ 77 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc------
Confidence 35799999999999999999999999999999998754433344556788999999999999999998764321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.....+++..++.++.||+.||.|||+++
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 78 -----------------------------REAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred -----------------------------ccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 011245799999999999999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||+++...... .......++..|+|||.+.....++.++|||
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVW 193 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------ccccccccccCccChHHHhcCCCCCCcccHH
Confidence 9999999999999999999999999997543211 0112346789999999887544589999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHH-----------------------hhhcCCC-----CCccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSD-----------------------LKQKGEL-----PPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~-----------------------l~~~~~~-----p~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||............ ....... .......++++.++|++
T Consensus 194 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 273 (337)
T cd07858 194 SVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEK 273 (337)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHH
Confidence 99999999996 66432211110000 0000000 01123456788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+|+...
T Consensus 274 ~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 274 MLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhcCChhhccCHHHHHcCcchhhh
Confidence 999999999999999999999754
No 215
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.4e-34 Score=321.49 Aligned_cols=250 Identities=25% Similarity=0.476 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++.+.||+|+||.||+|+++.+++.||||.++... ........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE------- 73 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-------
Confidence 368999999999999999999999999999999887533 233445678899999999999999999988743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|++|||++ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 74 ---------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 120 (267)
T cd08228 74 ---------------------------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE 120 (267)
T ss_pred ---------------------------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHH
Confidence 346799999997 488887753 345899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++
T Consensus 121 ~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~ 184 (267)
T cd08228 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYN 184 (267)
T ss_pred HHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh---------------HHHhcCCCCccccChhhhcc-CCCC
Confidence 9999999999999999999999999999999987653211 01123468899999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|+||||+++|||++ ||...... ......+. ....++. ....+..+.++|.+||+.+|.+||++.++++.
T Consensus 185 ~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 99999999999999997 66543221 12222222 2223332 22455689999999999999999999999974
No 216
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-35 Score=336.03 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=206.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
-..|+++++||+||.++||++... +.+.||+|++.....+.....-+.+|+..|.+| .|.+||++|++=+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------- 430 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------- 430 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------
Confidence 357999999999999999999876 567788888776666667778899999999999 6999999997631
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCH-HHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+||||-+.+|..+|++...... -..+.|..|++.++.++|.
T Consensus 431 --------------------------------~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 431 --------------------------------TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred --------------------------------cCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2568999999999999999998765433 4788899999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-------
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------- 610 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------- 610 (1196)
+||||-||||.|+|+- .|.+||+|||+|..+..+. .++...+.+||+.|||||++....
T Consensus 479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT-------------TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~ 544 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT-------------TSIVKDSQVGTVNYMSPEALTDMSSSRENGK 544 (677)
T ss_pred hceeecCCCcccEEEE-eeeEEeeeechhcccCccc-------------cceeeccccCcccccCHHHHhhccccccCCC
Confidence 9999999999999885 5899999999998764332 234456789999999999985411
Q ss_pred ---CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-C--CCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 611 ---KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-G--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 611 ---~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
..+.++||||||||||+|++ ||....+....+..+... . .+|.. +. ..++.++++.||+.||.+||++.
T Consensus 545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~-~~-~~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI-PE-NDELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred cceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC-CC-chHHHHHHHHHHhcCcccCCCcH
Confidence 15679999999999999994 888776555555444422 1 12222 12 12489999999999999999999
Q ss_pred HHHhccCCCCc
Q 000993 682 ELLQDALPPQM 692 (1196)
Q Consensus 682 eiL~~~~~~~~ 692 (1196)
++|+|||....
T Consensus 623 eLLqhpFl~~~ 633 (677)
T KOG0596|consen 623 ELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccccc
Confidence 99999987763
No 217
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.9e-34 Score=324.02 Aligned_cols=256 Identities=21% Similarity=0.389 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+ +||||++++++|+....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 87 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP----- 87 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc-----
Confidence 67889999999999999999999999999999986432 2345688899999998 79999999988753210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|++||||++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 88 -----------------------------~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 88 -----------------------------PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred -----------------------------cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124578999999975 899888653 45889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~ 612 (1196)
++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.. ...+
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~ 203 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 203 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc---------------cCCCcccccccccCHhhcCcccCcCcCC
Confidence 9999999999999999999999999999987542111 01133568999999998753 2357
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+.++|+|||||++|||++ ||....+......... ...........++++.+||.+||+.||.+||++.++++|+|+
T Consensus 204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 889999999999999996 7765544333222211 111111223456789999999999999999999999999996
No 218
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-34 Score=327.61 Aligned_cols=254 Identities=23% Similarity=0.416 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|++..+|+.||+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--------- 70 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec---------
Confidence 47889999999999999999999999999999987532 33345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||++ +|..++... ..+++..+..++.||+.||.|||
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 71 -------------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred -------------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 888887653 37999999999999999999999
Q ss_pred h-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-----
Q 000993 537 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----- 610 (1196)
Q Consensus 537 s-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 610 (1196)
+ .+|+||||||+||+++.++.+||+|||++..+... ......+++.|+|||.+.+..
T Consensus 120 ~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 182 (286)
T cd06622 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----------------LAKTNIGCQSYMAPERIKSGGPNQNP 182 (286)
T ss_pred hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----------------ccccCCCccCccCcchhcCCCCCccC
Confidence 7 59999999999999999999999999998754211 112346888999999986522
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHh-hhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDL-KQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l-~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|+|||||++|+|++ ||............. ......+..+...++++.++|.+||+.+|.+||++.++++|
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 35889999999999999997 775443322221111 11222233333466789999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+...
T Consensus 263 ~~~~~~ 268 (286)
T cd06622 263 PWLVKY 268 (286)
T ss_pred hhhhhc
Confidence 998654
No 219
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.6e-34 Score=326.26 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=201.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.++.+++.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE---------
Confidence 47899999999999999999999999999999987655444456788999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHH-HhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~-l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++|||+++++.+. ..+...+++.+++.++.||+.||+|||+++
T Consensus 72 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 72 -------------------------------KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346899999998765554 445567999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.+||+|||++........ .......++..|+|||++.+...++.++|+|
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~ 186 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------ccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence 99999999999999999999999999986532210 0113356889999999998854789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCC---------ccc-cCCHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWV-AKFSEQESLLR 667 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~-~~~~~l~~LI~ 667 (1196)
|||+++|+|++ ||................+ ..++ ... ..++++.+||+
T Consensus 187 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (288)
T cd07833 187 AIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLK 266 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHH
Confidence 99999999997 5544332222111110000 0000 001 12567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||..+|++|||+.++++|+||
T Consensus 267 ~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 267 ACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHhccCchhcccHHHHhcCCCC
Confidence 9999999999999999999997
No 220
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.5e-34 Score=323.41 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|.+.+.||+|+||.||+|.++.+++.+|+|++.... .....+.+|+.+++.+ +||||++++++|.....
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~---- 93 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK---- 93 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc----
Confidence 478999999999999999999999999999999986432 2345678899999999 89999999998854210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....+|+||||++ ++|.+++.. ...+++..++.++.|++.||+
T Consensus 94 -------------------------------~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 94 -------------------------------LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred -------------------------------cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 11346899999996 489888753 456899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--- 610 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--- 610 (1196)
|||+.+++||||||+||+++.++.+||+|||++....... .......|+..|+|||++....
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 207 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQYD 207 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc---------------ccccCccCCccccChhhhcCCCCcc
Confidence 9999999999999999999999999999999987643211 0112346889999999986522
Q ss_pred -CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 -~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............................+.+||.+||+.+|.+||++.++++|
T Consensus 208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 26889999999999999997 67655443333332221111111122345678999999999999999999999999
Q ss_pred cCCC
Q 000993 687 ALPP 690 (1196)
Q Consensus 687 ~~~~ 690 (1196)
+||+
T Consensus 288 ~~~~ 291 (291)
T cd06639 288 PFIK 291 (291)
T ss_pred cccC
Confidence 9984
No 221
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.1e-34 Score=331.44 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+|++.+.||+|+||.||+|++..++.. ||+|+++.. ......+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC----
Confidence 36899999999999999999998766654 899988632 233455678999999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 81 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred -------------------------------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 12478999996 6899988764 46889999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~-~~~~ 189 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------EYHAEGGKVPIKWMALESILH-RIYT 189 (316)
T ss_pred HHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-------------ceeccCCccceeecChHHhcc-CCCC
Confidence 99999999999999999999999999999999986532210 011122345778999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+. ..... ....++.....+.++.+++.+||..||.+||++.+++.+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHh-CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999874 6655433332 22222 333333334556789999999999999999999999975
No 222
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.6e-34 Score=317.48 Aligned_cols=257 Identities=33% Similarity=0.498 Sum_probs=206.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||+|+||.||+|.+..+++.||+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----------- 69 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----------- 69 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----------
Confidence 478889999999999999999989999999999866554456778999999999999999999998752
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++++||++ ++|.+++.....+++..++.++.||+.||+|||++|+
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 70 -----------------------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred -----------------------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 2356799999997 5999999887779999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 618 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDV 618 (1196)
+|+||+|+||+++.++.+||+|||++.......... ........+++.|+|||++.+.. .++.++||
T Consensus 121 ~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv 189 (264)
T cd06626 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189 (264)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------cccccCCcCCcCccChhhccCCCCCCCCcccch
Confidence 999999999999999999999999998654322110 00012346889999999988732 27899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~-~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||+++|+|++ ||............... .....+.+...++.+.++|++||+.+|.+|||+.+++.|+|+
T Consensus 190 ~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 190 WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999996 77654332222222221 111122333346789999999999999999999999999985
No 223
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.3e-34 Score=322.31 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=204.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+|++.+.||.|+||.||+|++..+++.||+|++...... ....+.+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ---------- 70 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----------
Confidence 588999999999999999999999999999999754432 245678999999999999999999987762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+||||+.+ +|.+++.....+++..+..++.||+.||.|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 71 ------------------------------DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred ------------------------------CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 24578999999964 99999987778999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||||+||+++.++.++|+|||++....... ......|+..|+|||.+.+ ..++.++|+|
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~ 183 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------cccccCCChhhcCHHHHcc-cCCCCcccch
Confidence 9999999999999999999999999987643211 1123468889999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCchhHH--HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH--HHHHhccCC
Q 000993 620 SLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--TELLQDALP 689 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta--~eiL~~~~~ 689 (1196)
|||+++|+|++ ||..... .......... ..+......+..+.++|.+||+.||.+||++ .++++|+||
T Consensus 184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred hhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999996 7665442 2222222221 2222223455789999999999999999999 999999997
No 224
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.8e-34 Score=317.44 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=204.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|+..+.||+|+||+||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------- 72 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER--------- 72 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe---------
Confidence 5667899999999999999998999999999876442 2334567899999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|++|||+++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 73 -------------------------------EEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred -------------------------------cCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 23567999999975 9999998887899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||+|+||+++.++.+||+|||++....... ......|++.|+|||.+.....++.++|+
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~ 185 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------FAKSFKGSPYWMAPEVIAQQGGYGLAADI 185 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCccceeccccc----------------cccccCCCcceeCHHHhcCCCCCCchhhh
Confidence 99999999999999999999999999987643211 11335688999999998763338899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||.............. ....+......++.+.+++++||+.+|.+||++.++++|+|+
T Consensus 186 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 186 WSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999996 7765554333333222 123333334456789999999999999999999999999985
No 225
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=311.64 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=208.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++.+.+..||.|+.|.||+++++.+|..+|||.+.... +.+...+++..+.++... +.|+||+.+|+|+.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~------- 162 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT------- 162 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-------
Confidence 467788889999999999999999999999999998554 445677888888877665 48999999999964
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|.||.|...+..++.+ .++++|..+-++...++.||.||..
T Consensus 163 ---------------------------------n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe 209 (391)
T KOG0983|consen 163 ---------------------------------NTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE 209 (391)
T ss_pred ---------------------------------CchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence 234578999998777776654 4679999999999999999999986
Q ss_pred C-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCC
Q 000993 538 Q-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 614 (1196)
Q Consensus 538 ~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ 614 (1196)
+ ||||||+||+|||+|..|++||||||++-++... ..++...|.+.|||||.+.. .+.|+.
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS----------------kAhtrsAGC~~YMaPERidp~~~~kYDi 273 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----------------KAHTRSAGCAAYMAPERIDPPDKPKYDI 273 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeecc----------------cccccccCCccccCccccCCCCCCccch
Confidence 4 7999999999999999999999999999876432 22455679999999999864 356999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||+|+||.| ||..-.. -+..-+++...+...+.....++.+++|+..||++|+.+||...++|+|+|..
T Consensus 274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 9999999999999997 7776433 33333444333322233344678999999999999999999999999999876
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
..+
T Consensus 354 ~ye 356 (391)
T KOG0983|consen 354 RYE 356 (391)
T ss_pred ecc
Confidence 553
No 226
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-34 Score=328.62 Aligned_cols=254 Identities=23% Similarity=0.391 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 87 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV-------- 87 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 3789999999999999999999999999999999875433 234668899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.. ..+++.++..++.|++.||.|||+.
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~ 134 (297)
T cd06656 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134 (297)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 488888754 4688999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 198 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------cCcCcccCCccccCHHHHcC-CCCCcHHHH
Confidence 99999999999999999999999999987542211 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||++|+|++ ||..........................++.+++|+.+||..||.+||++.++++|+|+...
T Consensus 199 ~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 999999999997 77654433222222111111111223455678999999999999999999999999998754
No 227
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=334.49 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=209.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
++||.|.||+||-|+++.+|+.||||+|.+-.-......++.+|+.+|..+.||.||.+-..|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~----------------- 632 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF----------------- 632 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----------------
Confidence 579999999999999999999999999976554445567899999999999999999987554
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
+....+|+|||-+.|++...+- +.+++++.....++.||+.||.|||-++|+|.|
T Consensus 633 -----------------------ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD 689 (888)
T KOG4236|consen 633 -----------------------ETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD 689 (888)
T ss_pred -----------------------cCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence 2367899999999998777663 456899999999999999999999999999999
Q ss_pred CCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 545 LTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 545 LKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|||+|||+.+. ..+||||||+|+.+.... ...+.+|||+|+|||+|+. ..|+..-||||.
T Consensus 690 LKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------FRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSV 752 (888)
T KOG4236|consen 690 LKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------FRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSV 752 (888)
T ss_pred CCchheeeccCCCCCceeeccccceeecchhh----------------hhhhhcCCccccCHHHHhh-ccccccccceee
Confidence 99999999764 469999999999876443 2356799999999999998 569999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||+|--++ ||....+-.. ++......+|+ .|..+++++.+||..+|+..-.+|.|.+..|.|+|.+...
T Consensus 753 GVIiYVsLSGTFPFNEdEdInd--QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDIND--QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred eEEEEEEecccccCCCccchhH--HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999998885 7765443322 22223344554 7888999999999999999999999999999999998864
No 228
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.1e-34 Score=316.88 Aligned_cols=247 Identities=30% Similarity=0.550 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||++.++.+++.||+|.++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 69 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA---------- 69 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 58899999999999999999999999999999875432 3345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...++++.++.++.||+.||.|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 70 ------------------------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred ------------------------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 457899999997 589888864 34589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+|+||||+||+++.++.++|+|||+++...... .......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv 183 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------AYACTYVGTPYYVPPEIWEN-MPYNNKSDI 183 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------cccccccCCccccCHHHHcc-CCcCchhhh
Confidence 99999999999999999999999999987543211 01123468999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
||||+++|+|++ ||............. ....++.....+..+.++|.+||+.||.+||++.+++...
T Consensus 184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 184 WSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 999999999996 776655444433332 2223333334567899999999999999999999998753
No 229
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.1e-34 Score=317.48 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=209.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|++|.||+|.+..+++.||||++...... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--------- 70 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc---------
Confidence 4789999999999999999999999999999998765432 456789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|++|||++ ++|.+++.....+++..++.++.||+.||+|||+ +
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 71 -------------------------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 356899999998 6999999888889999999999999999999999 9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv 183 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL---------------DQCNTFVGTVTYMSPERIQG-ESYSYAADI 183 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCC---------------CcccceeecccccCHhhhCC-CCCCchhhH
Confidence 99999999999999999999999999987653211 01123468899999999887 578999999
Q ss_pred HHHHHHHHHhhc---CCchhH--HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+++|+|++ ||.... ........+. ....+..... .+..+.++|.+||..+|++||++.++++|+|++..
T Consensus 184 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 184 WSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999997 665553 2222222222 2222322233 56789999999999999999999999999998654
No 230
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.9e-34 Score=322.46 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|+||.||+|.+..+|+.+|+|++............+.+|+.+++.++|||++++++++...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------- 70 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---------- 70 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC----------
Confidence 6788999999999999999998999999999986543334456788999999999999999999887321
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....+|+||||++++|.+++... ..+++..++.++.||+.||+|||++|++
T Consensus 71 ----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 71 ----------------------------GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ----------------------------CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 02568999999999999988765 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|+||||+||++++++.+||+|||++........ ...+...++..|+|||.+.+...++.++|||||
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 188 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS--------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc--------------ccccccccccccCCceeeEccccCChHHHHHHH
Confidence 999999999999999999999999986532210 012234678899999988765568899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---------------------------Ccccc-CCHHHHHHHHHcc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------PSWVA-KFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------~~~~~-~~~~l~~LI~~cL 670 (1196)
|+++|||++ ||...................+ ..... .++.+.++|++||
T Consensus 189 G~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (287)
T cd07840 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLL 268 (287)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence 999999997 6655443322222111100000 00111 1567889999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.+|.+||++.++++|+||
T Consensus 269 ~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 269 TLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCChhhCcCHHHHhhCcCC
Confidence 9999999999999999996
No 231
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.5e-34 Score=334.20 Aligned_cols=265 Identities=28% Similarity=0.390 Sum_probs=210.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||.|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP------- 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc-------
Confidence 4888999999999999999999889999999987554434556789999999999999999999987643210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 74 ----------------------------EDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred ----------------------------ccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1124679999999999999998878899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.++|+|||++......... ........+|+.|+|||++.+...++.++|+|||
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 193 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc------------cccccccccccCcCCceeeecccCCCcchhHHHH
Confidence 9999999999999999999999999865322100 0112345689999999999885478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHHHHcc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~~l~~LI~~cL 670 (1196)
|+++|+|++ ||......+.........+..++ .....++++.++|.+||
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 273 (330)
T cd07834 194 GCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273 (330)
T ss_pred HHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence 999999997 66544433322222111111000 11224567899999999
Q ss_pred cCCCCCCCCHHHHHhccCCCCch
Q 000993 671 SPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+.+|.+||++.++++|+||.+..
T Consensus 274 ~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 274 VFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCChhhCCCHHHHHhCccHHhhc
Confidence 99999999999999999998754
No 232
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2e-34 Score=326.39 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=200.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|...+.||+|+||.||++.+..+++.||+|.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--------
Confidence 4677788999999999999999999999999998754333 44567889999999996 9999999987732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||+++++.++.. ....+++..+..++.|++.||+|
T Consensus 75 --------------------------------~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 122 (288)
T cd06616 75 --------------------------------EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY 122 (288)
T ss_pred --------------------------------CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 34568999999887665432 23569999999999999999999
Q ss_pred HHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CC
Q 000993 535 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PK 611 (1196)
Q Consensus 535 LHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~ 611 (1196)
||+. +++||||||+||+++.++.+||+|||+++.+.... ......|++.|+|||++.+. ..
T Consensus 123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (288)
T cd06616 123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSARDG 186 (288)
T ss_pred HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----------------ccccccCccCccCHHHhccccccC
Confidence 9975 99999999999999999999999999997653211 11234688999999999874 36
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++.++|||||||++|||++ ||................ ..++ ......++++.+||++||+.||.+|||++++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999996 765443211111111111 1111 112345678999999999999999999999999
Q ss_pred ccCCCCch
Q 000993 686 DALPPQME 693 (1196)
Q Consensus 686 ~~~~~~~~ 693 (1196)
|+|+....
T Consensus 267 ~~~~~~~~ 274 (288)
T cd06616 267 HPFIKDYE 274 (288)
T ss_pred Chhhhchh
Confidence 99997654
No 233
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=316.58 Aligned_cols=257 Identities=27% Similarity=0.392 Sum_probs=208.3
Q ss_pred CcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
-...++|.+- ++||-|-.|+|..|.++.||+.+|+|++.. .....+|+++.-.. .|||||+++++|-.
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeN--- 126 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYEN--- 126 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhh---
Confidence 3356788774 579999999999999999999999998852 23456788765544 79999999988721
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEG 531 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~g 531 (1196)
.......+.||||.+. |.|...++.++. |++.++..|+.||..|
T Consensus 127 ---------------------------------s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~A 173 (400)
T KOG0604|consen 127 ---------------------------------SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA 173 (400)
T ss_pred ---------------------------------hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 1123578899999996 589999987765 9999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.|||+.+|.||||||+|+|.... ..+||+|||+|+....+ ....+.|.||.|.|||++..
T Consensus 174 v~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~----------------~~L~TPc~TPyYvaPevlg~ 237 (400)
T KOG0604|consen 174 VRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP----------------GDLMTPCFTPYYVAPEVLGP 237 (400)
T ss_pred HHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC----------------ccccCCcccccccCHHHhCc
Confidence 999999999999999999999754 46999999999863211 12356789999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHH----HHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..|+..+|+||+||++|-|++ ||+..... ....++......+| +.|...+..++++|+.+|..+|.+|.|+
T Consensus 238 -eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI 316 (400)
T KOG0604|consen 238 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI 316 (400)
T ss_pred -hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeH
Confidence 579999999999999999997 66544321 12223334444555 5888889999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 000993 681 TELLQDALPPQME 693 (1196)
Q Consensus 681 ~eiL~~~~~~~~~ 693 (1196)
.+++.|||..+..
T Consensus 317 ~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 317 EEVMDHPWINQYE 329 (400)
T ss_pred HHhhcCchhcccc
Confidence 9999999987753
No 234
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.4e-34 Score=319.31 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=202.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+|+..+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 467788999999999999999999999999998754321 123467889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||+++ +|.+++....++++..++.++.||+.||+|||
T Consensus 74 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 74 ---------------------------------EDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred ---------------------------------cCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24567999999974 89999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++|++||||||+||+++.++ .+||+|||++.......... ........||..|+|||.+.+ ..++.+
T Consensus 121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~-~~~~~~ 188 (268)
T cd06630 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------GEFQGQLLGTIAFMAPEVLRG-EQYGRS 188 (268)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------CccccccccccceeCHhHhcc-CCCCcc
Confidence 99999999999999998776 59999999997654221000 001123468899999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+|+||||+++|+|++ ||...... .............+......++++.+++.+||..+|.+||++.++++|+||.
T Consensus 189 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 189 CDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999996 66432211 1111111111222223334567899999999999999999999999999974
No 235
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.4e-34 Score=318.74 Aligned_cols=251 Identities=28% Similarity=0.378 Sum_probs=195.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
++.....||+|+||.||+|++..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 76 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE---------- 76 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc----------
Confidence 3344468999999999999999899999999886432 3345678999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCC--CHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++... ..+ ++..+..++.||+.||+|||+
T Consensus 77 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 77 ------------------------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999988754 445 888899999999999999999
Q ss_pred CCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~k 615 (1196)
+||+||||||+||+++. ++.+||+|||++....... .......|++.|+|||++.+. ..++.+
T Consensus 127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~ 191 (268)
T cd06624 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEVIDKGPRGYGAP 191 (268)
T ss_pred CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC---------------CccccCCCCccccChhhhccccccCCch
Confidence 99999999999999986 6789999999987542111 011233578999999998652 247899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+|+||||+++|+|++ ||...................+.......+++.+++++||+.+|.+|||+.+++.|||+
T Consensus 192 ~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 192 ADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred hhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999999996 66543222221111111122222333456789999999999999999999999999996
No 236
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-35 Score=340.68 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=204.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---E-EEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---H-YAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~-vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++-.+.++||+|+||+||+|+.+..+. . ||||..+... .......+|++|.++|+.++|||||++||++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 455666899999999999999986533 3 8999887533 455667889999999999999999999998743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|||||+|. |+|.++|++.+ .++..+...++.+.+.||+
T Consensus 233 ------------------------------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 233 ------------------------------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLE 276 (474)
T ss_pred ------------------------------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHH
Confidence 345799999996 59999999877 4999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++++|||||-.+|||++.++.+||+|||+++.-..- ........-...|+|||.+.. ..|+
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~---------------~~~~~~~klPirWLAPEtl~~-~~~s 340 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY---------------VMKKFLKKLPIRWLAPETLNT-GIFS 340 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce---------------eeccccccCcceecChhhhcc-Cccc
Confidence 999999999999999999999999999999998753200 001111235678999999998 5899
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.++|||||||++||+++ ||.+....+....+.......+. ....+..+..++.+||..||++||++.++.+
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 99999999999999985 88888887777666553433332 2255568899999999999999999999976
No 237
>PRK14799 thrS threonyl-tRNA synthetase; Provisional
Probab=100.00 E-value=3.8e-34 Score=345.01 Aligned_cols=358 Identities=14% Similarity=0.138 Sum_probs=266.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
..+.|+++|+|.++.+++.|++.+++.+.++||++|.||.+ ++ +++.+.+.++||.+ |.+|+.++|||+.|++
T Consensus 155 ~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~ 233 (545)
T PRK14799 155 EAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPA 233 (545)
T ss_pred ccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhccee-eccCceEEeccCCCHH
Confidence 45789999999999999999999999999999999999999 22 33345589999988 8889999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCCC-----CCcceeEeEEEEeCCCCcc-chH-HHHHHHHHHHHHcCCC-C
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHA-E 880 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~-aDa-EvI~la~~~L~~lgi~-~ 880 (1196)
++|+++.+. ..|+|+|++|+|||+|.++. |.|+|+|+++|+||..++. +|+ |++.++.++++.+|++ .
T Consensus 234 ~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~ 313 (545)
T PRK14799 234 HILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDD 313 (545)
T ss_pred HHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999998742 46999999999999999874 6667999999999999875 887 9999999999999996 2
Q ss_pred ceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Q 000993 881 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 960 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 960 (1196)
++.+.++++. .+.+|.++.|.+.... + ++.+.+.|++....+...+|+ |
T Consensus 314 ~~~i~ls~Rp-----e~~~G~~~~wdka~~~---------------------l-~~~L~~~gl~~~~~~g~gafy----g 362 (545)
T PRK14799 314 DIKPYLSTRP-----DESIGSDELWEKATNA---------------------L-ISALQESGLKFGIKEKEGAFY----G 362 (545)
T ss_pred cEEEEEEcCh-----hhhcCCHHHHHHHHHH---------------------H-HHHHHHcCCCeEEecceeccc----c
Confidence 4999999986 3456765533222111 1 233334555554444444443 2
Q ss_pred ChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 961 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
+.. +-.+..++.+. .+. ..+.+|+.+.+.++ + +.+..+... ..+|
T Consensus 363 pki------------D~~v~dalgr~-~q~----~Tiqldf~lp~rf~----L--ey~~~~~~~------~~pv------ 407 (545)
T PRK14799 363 PKI------------DFEIRDSLGRW-WQL----STIQVDFNLPERFK----L--EYIDKDGIK------KRPV------ 407 (545)
T ss_pred Ccc------------ceEehhhcCch-hhh----hhhhhhcCcccccc----e--EEEcCCCCC------cccE------
Confidence 210 01111222221 000 12335555554444 1 222111000 0001
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
+...|+..|+||++.+|.+ +..+. ..++.+|+|++.+ +....+|.++++.||++
T Consensus 408 ---------------------~ihr~~~GgiERli~iL~e~~~G~~P~-wlaP~qV~Iipi~-e~~~~~A~~Ia~~LR~~ 464 (545)
T PRK14799 408 ---------------------MVHRAIYGSIDRFVAILLEHFKGKLPT-WLSSVQVRVLPIT-DEVNEYAEKVLNDMRKR 464 (545)
T ss_pred ---------------------EEEccCCCCHHHHHHHHHHHcCCCCCC-CCCCceEEEEEcC-HHHHHHHHHHHHHHHhC
Confidence 1233777799999988853 32332 2457899999996 66788999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
|++|+++.. ++++++++++|++.|+|++|+||++|+++|+|+||+|.+++|..++++++++.+.+.+++
T Consensus 465 GirVelD~~-~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~ 533 (545)
T PRK14799 465 RIRAEIDYA-GETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQ 533 (545)
T ss_pred CCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhh
Confidence 999998876 679999999999999999999999999999999999999999999999999999888775
No 238
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-35 Score=335.87 Aligned_cols=293 Identities=24% Similarity=0.395 Sum_probs=222.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.-|..++.||-|+||+|.+++...|...||+|.+++.+.-. .....+.-|-.||...+.+-||++|-.|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF---------- 698 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF---------- 698 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe----------
Confidence 35678999999999999999999999999999998655322 2234577899999999999999999777
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|+||+|++ |++..+|.+.+-|.|..+++|+.++.+|+++.|..
T Consensus 699 ------------------------------QDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 699 ------------------------------QDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred ------------------------------ccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678999999997 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccc---cccc------CCCCCC---C---------------CCCccccC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQ------DAAFPT---D---------------TGGVSVDG 591 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~---~~~~------~~~~~~---~---------------~~~~~~~~ 591 (1196)
|+|||||||+|||||.+|++||+|||+|.-+.-. .+.+ ...... . .....+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~a 828 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILA 828 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999743211 0000 000000 0 00011223
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH--HhhhcCCCCCccccCCHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS--DLKQKGELPPSWVAKFSEQESLL 666 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~--~l~~~~~~p~~~~~~~~~l~~LI 666 (1196)
.+.+||+.|+|||++.. ..|+..+|+||.|||||||+. ||....+.+...+ .++....+ +...+.++++.++|
T Consensus 829 hslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~-~~~~~ls~e~~~li 906 (1034)
T KOG0608|consen 829 HSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHI-PYQGNLSKEALDLI 906 (1034)
T ss_pred hhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccc-ccccccCHHHHHHH
Confidence 46789999999999998 579999999999999999994 8876655433322 22222222 33446678999999
Q ss_pred HHcccCCCCCCC---CHHHHHhccCCCCchHHHHHHH----HHhcCCCCCCcchhhh
Q 000993 667 RRLMSPSPSDRP---SATELLQDALPPQMEYELLDNI----LRMMHSSEDTSIYDKV 716 (1196)
Q Consensus 667 ~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~ 716 (1196)
.++. .+++.|. .+++|..|+||+.+.+..+... +..+..+.|.+.++.+
T Consensus 907 ~kLc-~sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFdpv 962 (1034)
T KOG0608|consen 907 QKLC-CSADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFDPV 962 (1034)
T ss_pred HHHh-cChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCCcC
Confidence 8764 4577787 4788999999999988765442 2344455566666543
No 239
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.1e-34 Score=324.99 Aligned_cols=268 Identities=26% Similarity=0.420 Sum_probs=205.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+..++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++.+.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~--- 80 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD--- 80 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch---
Confidence 34678999999999999999999999999999999997654433344567889999999999999999988743210
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+ ........+|++|||+++++.+.+... ..+++..++.++.||+.||+|||
T Consensus 81 ---~~------------------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 81 ---AL------------------------DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ---hh------------------------hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 000123478999999999888877654 46999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++........ .......++..|+|||.+.+...++.++
T Consensus 134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------RPYTNKVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--------------cccccceeccCccChHHhcCCCCCCchh
Confidence 99999999999999999999999999999986532210 0112235678899999987645578999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CC--------------------------CccccCCHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LP--------------------------PSWVAKFSEQESLL 666 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p--------------------------~~~~~~~~~l~~LI 666 (1196)
|||||||++|||++ ||.................. .+ ..+...++.+.++|
T Consensus 200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence 99999999999996 66544332222111111110 00 01123456889999
Q ss_pred HHcccCCCCCCCCHHHHHhccCC
Q 000993 667 RRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.+||+.||.+||++.+++.|+|+
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999986
No 240
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.7e-34 Score=333.02 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=204.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++.....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~----- 90 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----- 90 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc-----
Confidence 378999999999999999999999999999999987544333345678899999999999999999987742210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.......|+++++++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 91 -----------------------------~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 91 -----------------------------LEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred -----------------------------ccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 012345789999998899887764 46999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 202 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 202 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccccccc------------------cccccccCCCccCHHHHhCccCCCchhhHH
Confidence 99999999999999999999999999875321 112346889999999987755688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||................. ..+. .+...++++.++|.+
T Consensus 203 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 203 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 6643322221111111000 0110 112346688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+||++.++++|+||.+..
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcC
Confidence 9999999999999999999998653
No 241
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.6e-34 Score=324.00 Aligned_cols=252 Identities=26% Similarity=0.386 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 74 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN--------- 74 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec---------
Confidence 68899999999999999999999999999999987543 23456789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|+||||++ ++|.+++...+.+++..++.++.+++.||.|||+ .
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 75 -------------------------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred -------------------------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 356899999997 4898988887889999999999999999999997 6
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+||+++.++.++|+|||++....... ....+|+..|+|||++.+ ..++.++|+
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----------------~~~~~~~~~~~aPE~~~~-~~~~~~~Di 185 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----------------ADTFVGTSTYMSPERIQG-GKYTVKSDV 185 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----------------cCccccCcccCCHHHHcc-CCCCccchH
Confidence 89999999999999999999999999986532110 123478999999999877 478999999
Q ss_pred HHHHHHHHHhhc---CCchhHHH-----------HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMER-----------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~-----------~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
|||||++|+|++ ||...... ........ ...........+.++.+|+.+||+.||.+|||+.+++
T Consensus 186 ~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~ 264 (284)
T cd06620 186 WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLC 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 999999999996 77643321 11111111 1111111122556899999999999999999999999
Q ss_pred hccCCCCc
Q 000993 685 QDALPPQM 692 (1196)
Q Consensus 685 ~~~~~~~~ 692 (1196)
+|+||.+.
T Consensus 265 ~~~~~~~~ 272 (284)
T cd06620 265 AMPPFIQA 272 (284)
T ss_pred cCcccccc
Confidence 99988664
No 242
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.7e-34 Score=333.43 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS----- 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc-----
Confidence 368999999999999999999999899999999987544333344568899999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||+..+|..++. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 89 -----------------------------GDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred -----------------------------CCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999888877653 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 199 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIW 199 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC------------------CCCCceeeecccChhhhcCccccCchHHHH
Confidence 99999999999999999999999999874311 123346789999999987645688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~-----------------------~~~p-----~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||............+... ...+ ..+...++.+.+||++
T Consensus 200 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 99999999996 776543322222111100 0001 1122345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+||++.+++.|+||....
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcc
Confidence 9999999999999999999997753
No 243
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.5e-34 Score=318.18 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=194.4
Q ss_pred eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+||+|+||.||+|.+ +.++..+|+|+++.........+.+.+|+.+++.++||||+++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--------------- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------------
Confidence 589999999999975 456889999998755555555678999999999999999999997751
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+++|||++ ++|.+++.....+++..+..++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 67 --------------------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred --------------------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 123589999997 58999998878899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||+++........ ........+++.|+|||.+.+ ..++.++|||||||+
T Consensus 121 lkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~ 187 (257)
T cd05116 121 LAARNVLLVTQHYAKISDFGLSKALGADENY------------YKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVL 187 (257)
T ss_pred cchhhEEEcCCCeEEECCCccccccCCCCCe------------eeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHH
Confidence 9999999999999999999999765322100 001122345689999999876 568899999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||++ ||........... +. ....++.....++++.++|.+||+.||.+||++.+|.+.
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQM-IE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 999985 7765544433332 22 223333344567899999999999999999999999753
No 244
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.5e-34 Score=327.34 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=198.8
Q ss_pred CceEEeeeccCCcEEEEEEEEcc--CCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.|++.++||+|+||.||+|.++. +++.||+|.+.... ........+.+|+.+++.++||||+++++++.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 47889999999999999999998 89999999987533 1122345678899999999999999999887431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+||||++++|.+++... ..+++..++.++.||+.||+
T Consensus 75 --------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 75 --------------------------------ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --------------------------------CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 23578999999998888877432 26899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecC----CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||+++|+||||||+||+++. ++.+||+|||+++....... .........+|+.|+|||++.+.
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~~ 190 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK------------PLADLDPVVVTIWYRAPELLLGA 190 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc------------cccccCCccccccccCHHHHhCC
Confidence 999999999999999999999 89999999999986532210 01122345789999999998775
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHH---------HHH---HHh-----------------------hhcCCC
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQ---------IVL---SDL-----------------------KQKGEL 651 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~---------~~~---~~l-----------------------~~~~~~ 651 (1196)
..++.++|||||||++|+|++ ||....... ... ..+ ......
T Consensus 191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd07842 191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270 (316)
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence 568999999999999999996 664322111 000 000 000001
Q ss_pred C-C-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 652 P-P-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 652 p-~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+ . .+...++++.++|.+||+.||.+|||+.++++|+||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 1 0 001344578899999999999999999999999997
No 245
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.6e-34 Score=333.69 Aligned_cols=266 Identities=26% Similarity=0.369 Sum_probs=207.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||.|+||.||+|.+..+|+.+|||++............+.+|+.+++.+ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---- 79 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---- 79 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----
Confidence 456789999999999999999999998999999998864433334455678899999999 999999999887321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+||||++++|..++... .+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 80 ----------------------------------NDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ----------------------------------CCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 23467999999999999988765 7899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++.+....... .........||+.|+|||++.+...++.++
T Consensus 125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s 194 (337)
T cd07852 125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP----------ENPVLTDYVATRWYRAPEILLGSTRYTKGV 194 (337)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc----------cCcchhcccccccccCceeeeccccccccc
Confidence 9999999999999999999999999999998653221100 001123356899999999887655688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--------------------------CC--CCCccccCCHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------GE--LPPSWVAKFSEQESL 665 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--------------------------~~--~p~~~~~~~~~l~~L 665 (1196)
|+|||||++|+|++ ||................ .. ........+.++.++
T Consensus 195 Di~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 274 (337)
T cd07852 195 DMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDL 274 (337)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHH
Confidence 99999999999997 665333222111110000 00 011122346688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|.+||+.||.+|||+.++++|+|+.++
T Consensus 275 i~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 275 LKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHhccCCcccccCHHHHhhChhhhhh
Confidence 999999999999999999999988874
No 246
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=342.13 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=214.1
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
+.+||+ +....||+|+|-+||+|.+..+|..||.-.++..+ .+....++|..|+.+|+.|+|||||++|.+|.+.
T Consensus 37 p~gRy~---k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 37 PTGRYL---KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred CCCcee---ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 345653 23467999999999999999999999976665544 4445568999999999999999999999999653
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
....+.+|+|.+. |+|..++.+.++++...+..|++||+.|
T Consensus 114 --------------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG 155 (632)
T KOG0584|consen 114 --------------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG 155 (632)
T ss_pred --------------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 2356889999995 8999999999999999999999999999
Q ss_pred HHHHHhCC--CcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQG--IIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~g--IiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|.|||++. |||||||-+||||+.+ |.|||+|+|+|+....+. ..+.+|||.|||||.+..
T Consensus 156 L~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----------------aksvIGTPEFMAPEmYEE 218 (632)
T KOG0584|consen 156 LVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----------------AKSVIGTPEFMAPEMYEE 218 (632)
T ss_pred hhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----------------cceeccCccccChHHHhh
Confidence 99999995 9999999999999876 899999999999764321 244789999999999985
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
.|+..+||||||..|+||+| ||..-.+.....+.+. .+..|..+.. ..|++++||.+||.. ..+|||+.++|
T Consensus 219 --~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 219 --NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred --hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 69999999999999999997 8876655544444444 4444544443 357999999999999 99999999999
Q ss_pred hccCCCCc
Q 000993 685 QDALPPQM 692 (1196)
Q Consensus 685 ~~~~~~~~ 692 (1196)
+|+||...
T Consensus 295 ~d~Ff~~d 302 (632)
T KOG0584|consen 295 KDPFFDED 302 (632)
T ss_pred hChhhccc
Confidence 99999864
No 247
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.4e-34 Score=316.02 Aligned_cols=245 Identities=22% Similarity=0.374 Sum_probs=195.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||++.++ ++..+|+|.+...... ..++.+|+.+|+.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--------- 70 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc---------
Confidence 67999999999999999999886 5668999987643322 4578899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05114 71 -------------------------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN 119 (256)
T ss_pred -------------------------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 589998875 34689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--------------TSSSGAKFPVKWSPPEVFNF-SKYSSKSDV 184 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCce--------------eccCCCCCchhhCChhhccc-Cccchhhhh
Confidence 999999999999999999999999999876432110 01122345678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|||++ ||......+........ ..+......+..+.+++.+||+.+|.+||++.++++.
T Consensus 185 ~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 185 WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG--FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999996 77665554444433322 1222222345689999999999999999999999863
No 248
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.2e-34 Score=357.26 Aligned_cols=265 Identities=25% Similarity=0.394 Sum_probs=198.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++.++||+|+||.||+|.+..+|+.||||+++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d------- 73 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD------- 73 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------
Confidence 3689999999999999999999999999999999874332 23345679999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-----------CCCCHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------DHFDKELAWHLFR 526 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------~~l~e~~~~~i~~ 526 (1196)
....|++||||+ ++|.+++... ..++...++.++.
T Consensus 74 ---------------------------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~ 120 (932)
T PRK13184 74 ---------------------------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120 (932)
T ss_pred ---------------------------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHH
Confidence 356799999997 4999988642 2345667889999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccC-CCCCCC--CCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-AAFPTD--TGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......... ...... ...........+||+.||||
T Consensus 121 QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 121 KICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999987632111000 000000 00000011235799999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
|++.+ ..++.++|||||||++|||++ ||......................+...++.+.+++.+||+.||++||+.
T Consensus 201 E~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 201 ERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred HHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 99987 568999999999999999997 77654443332221111111111234566789999999999999999876
Q ss_pred HHHHh
Q 000993 681 TELLQ 685 (1196)
Q Consensus 681 ~eiL~ 685 (1196)
.+.+.
T Consensus 280 ~eeLl 284 (932)
T PRK13184 280 VQELK 284 (932)
T ss_pred HHHHH
Confidence 65554
No 249
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.6e-34 Score=334.19 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||.|+||.||+|.+.. +++.||+|+++... .......+.+|+.+++.+ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 478999999999999999997543 45789999986432 233456788999999999 899999999887432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...++++|||++ ++|.+++...
T Consensus 84 -------------------------------------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T cd05054 84 -------------------------------------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQK 126 (337)
T ss_pred -------------------------------------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence 346789999997 4888887532
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEe
Q 000993 514 -----------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552 (1196)
Q Consensus 514 -----------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILl 552 (1196)
.++++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill 206 (337)
T cd05054 127 EGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL 206 (337)
T ss_pred cccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence 257889999999999999999999999999999999999
Q ss_pred cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc--
Q 000993 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-- 630 (1196)
Q Consensus 553 d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-- 630 (1196)
+.++.+||+|||+++.+.... .........++..|+|||++.+ ..++.++|||||||+||||++
T Consensus 207 ~~~~~vkL~DfG~a~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 207 SENNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred eCCCcEEEeccccchhcccCc-------------chhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcC
Confidence 999999999999998653211 0111233456788999999987 568999999999999999985
Q ss_pred --CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 631 --PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 631 --Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||......+.....+. ....+......++++.+++.+||+.+|.+||++.+++++
T Consensus 273 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6754333222222222 222222233456789999999999999999999999986
No 250
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-35 Score=289.81 Aligned_cols=257 Identities=27% Similarity=0.502 Sum_probs=207.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|...++||+|.||+|++|+++.+++.||+|.++..+.+...-...++|+-+|+.+.|.|||+++++..
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh---------- 71 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH---------- 71 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----------
Confidence 4577788999999999999999999999999999987766666677899999999999999999997641
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+-+|+|||..+|..++.+ ++.++.+.++.++.|+++||.|+|+++
T Consensus 72 ------------------------------sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn 121 (292)
T KOG0662|consen 72 ------------------------------SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN 121 (292)
T ss_pred ------------------------------cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence 2467889999999999998875 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
+.||||||+|.||+.+|.+||+|||+|+.+.-+- ...+..+-|.+|.+|.++-|..-|+.+.|||
T Consensus 122 vlhrdlkpqnllin~ngelkladfglarafgipv---------------rcysaevvtlwyrppdvlfgakly~tsidmw 186 (292)
T KOG0662|consen 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186 (292)
T ss_pred hhhccCCcceEEeccCCcEEecccchhhhcCCce---------------EeeeceeeeeeccCcceeeeeehhccchHhh
Confidence 9999999999999999999999999999764321 1123457899999999999977799999999
Q ss_pred HHHHHHHHhhc---CCc-hhHHHHHHHHHhhhcCCC-----------------C-----CccccCCH----HHHHHHHHc
Q 000993 620 SLGIVFFELWH---PFS-TAMERQIVLSDLKQKGEL-----------------P-----PSWVAKFS----EQESLLRRL 669 (1196)
Q Consensus 620 SlGviLyELlt---Pf~-~~~~~~~~~~~l~~~~~~-----------------p-----~~~~~~~~----~l~~LI~~c 669 (1196)
|.|||+.|+.. |.. +.+-.....++...-+.. | ..|....| .-++|+.++
T Consensus 187 sagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkl 266 (292)
T KOG0662|consen 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKL 266 (292)
T ss_pred hcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHH
Confidence 99999999974 433 333233333332221111 0 01222222 237999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|.-+|.+|.+++..++||+|...
T Consensus 267 l~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 267 LKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hccCcccccCHHHHhcCcccccc
Confidence 99999999999999999988653
No 251
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.6e-34 Score=315.08 Aligned_cols=250 Identities=33% Similarity=0.560 Sum_probs=203.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.++.+|..||+|.+..........+.+.+|+.+++.++||||+++++.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~---------- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE---------- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----------
Confidence 5788999999999999999999999999999997654433445678899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+++||++ ++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 71 ------------------------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999996 59999887543 479999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCC-eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+++|+||||+||+++.++. +||+|||.+........ ......|++.|+|||++.+ ..++.++|
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~-~~~~~~~D 184 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---------------LAYTCVGTPYYLSPEICQN-RPYNNKTD 184 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc---------------cccccCCCccccCHHHHcC-CCCCchhh
Confidence 9999999999999998864 69999999976532110 0122358899999999887 46889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||||+++|||++ ||.............. ...++.....+.++.++|.+||..+|++|||+.++++|+||
T Consensus 185 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 185 IWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ--GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999996 7765544444333322 22333333456789999999999999999999999999996
No 252
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.9e-34 Score=325.19 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|...+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------- 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------- 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--------
Confidence 458889999999999999999999999999999875432 33344678899999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||++|++.+++.. ...+++..+..++.||+.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 87 --------------------------------EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred --------------------------------CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999999998888764 45699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||+|+||+++.++.+||+|||++..... .....+++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~s 195 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 195 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCC-------------------CCCccCCccccCceeeeccCCCCCCccc
Confidence 999999999999999999999999999865321 123467889999998752 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||+++|||++ ||.............. ...........+..+.++|.+||+.||.+||++.++++|+|+....
T Consensus 196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999997 6654433332222211 1111111123456889999999999999999999999999987643
No 253
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.5e-34 Score=327.36 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--------- 90 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--------- 90 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec---------
Confidence 44555678999999999999999899999999986432 2345678899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..+.|++|||+++ +|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 91 -------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 91 -------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred -------------------------------CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3567999999975 7877764 456899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+|
T Consensus 139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 202 (292)
T cd06658 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---------------PKRKSLVGTPYWMAPEVISR-LPYGTEVDIW 202 (292)
T ss_pred EeecCCCHHHEEEcCCCCEEEccCcchhhccccc---------------ccCceeecCccccCHHHHcc-CCCCchhhHH
Confidence 9999999999999999999999999987542111 01133568999999999877 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||+++|||++ ||....................+.....+..+.+++.+||..||.+|||++++++|+||...
T Consensus 203 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 99999999997 77655443333222211112222223456788999999999999999999999999998754
No 254
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.3e-34 Score=321.24 Aligned_cols=248 Identities=28% Similarity=0.382 Sum_probs=191.9
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHHHHHHh---cCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREVATLSR---LQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev~iL~~---L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.||+|+||.||++.+..+++.||+|.+......... ...+.+|..+++. .+||||+.+++.+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT------------ 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec------------
Confidence 489999999999999999999999998754332222 2234445444433 479999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
...+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 69 ----------------------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred ----------------------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 346799999997 589999988888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.++|+|||++...... ......||+.|+|||.+.+...++.++|+||||
T Consensus 121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceecccc-----------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 999999999999999999999998643211 012246899999999987535588999999999
Q ss_pred HHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCC
Q 000993 623 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 691 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~ 691 (1196)
|++|+|++ ||..... .............. ....++++.++|++||..||.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999997 7753321 11111111111112 223567899999999999999999 6999999999998
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
..+.
T Consensus 261 ~~~~ 264 (279)
T cd05633 261 IDWQ 264 (279)
T ss_pred CCHh
Confidence 7643
No 255
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.6e-34 Score=320.50 Aligned_cols=250 Identities=19% Similarity=0.291 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ---- 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----
Confidence 468999999999999999999863 356789999886432 23344678899999999999999999988632
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-----------------CCCC
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------------DHFD 517 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------------~~l~ 517 (1196)
....|++|||++ ++|.+++... ..++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 79 ------------------------------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred ------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 345799999997 5999988532 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+.++..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY-------------YRVQPKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc-------------eecccCCCcc
Confidence 888999999999999999999999999999999999999999999999986532210 0112334567
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
..|+|||++.+ ..++.++|||||||++|||++ ||........ ..... ....++.....++.+.+++.+||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05090 190 IRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVR-KRQLLPCSEDCPPRMYSLMTECWQEG 266 (283)
T ss_pred ceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccC
Confidence 88999999987 568999999999999999996 7765544333 22222 22233344456778999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05090 267 PSRRPRFKDIHTR 279 (283)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999875
No 256
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.1e-34 Score=317.57 Aligned_cols=248 Identities=29% Similarity=0.458 Sum_probs=201.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------------- 64 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD---------------- 64 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----------------
Confidence 6999999999999998999999999975442 23345679999999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
...+|++|||++ ++|.+++.+...+++..+..++.||+.||+|||+++++|+|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 65 ------------------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ------------------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 346799999996 5999999888889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++....... ......|++.|+|||.+.+ ..++.++|+||||+++|
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~ 183 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------KTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLY 183 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc----------------ccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence 999999999999999999997653211 1123468899999999877 56899999999999999
Q ss_pred Hhhc---CCchhH--HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 627 ELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 627 ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
+|++ ||.... .......... ....+......++++.++|.+||+.||.+||+ ++++++||||....+
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9996 776554 3333333221 11122222233678999999999999999999 999999999987654
No 257
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1e-33 Score=328.16 Aligned_cols=264 Identities=25% Similarity=0.324 Sum_probs=204.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccC--CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||.||+|++..+ +..||||++............+.+|+.+++.+ +||||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----- 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----- 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-----
Confidence 488999999999999999999988 89999999864333333456788999999999 5999999987653210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (332)
T cd07857 76 -------------------------------GNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA 124 (332)
T ss_pred -------------------------------ccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1134578999999999999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.+....... ........||+.|+|||++.+...++.++||
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGEN-----------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccc-----------cccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999998654221110 0112345789999999988764568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhh-----------------------hc-----CCCCCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLK-----------------------QK-----GELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~-----------------------~~-----~~~p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||............+. .. ..++......+..+.+++.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 999999999996 6654322111111000 00 0011112234568899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.||.+|||+.+++.|+|+...
T Consensus 274 ~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 274 KLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHccCCcccCCCHHHHhcChhhhhh
Confidence 9999999999999999999997543
No 258
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.3e-34 Score=333.04 Aligned_cols=262 Identities=26% Similarity=0.419 Sum_probs=207.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 88 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS---- 88 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc----
Confidence 3478999999999999999999999999999999987544344445678899999999999999999876632110
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|+||++++|.+++.. .++++..++.++.||+.||+|||++
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~ 137 (343)
T cd07851 89 ------------------------------LEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA 137 (343)
T ss_pred ------------------------------ccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012345899999999999998865 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+...++.++||
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEcccccccccccc------------------ccCCcccccccCHHHHhCCCCCCchHhH
Confidence 9999999999999999999999999999754211 1334678899999998764467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~~l~~LI~ 667 (1196)
|||||++|||++ ||................+..+ ......++.+.++|+
T Consensus 200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~ 279 (343)
T cd07851 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence 999999999997 6754443332222211111000 111234678899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++++|+|+.+..
T Consensus 280 ~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 280 KMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HhCCCChhhCCCHHHHhcCCCccccC
Confidence 99999999999999999999998754
No 259
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.7e-34 Score=330.10 Aligned_cols=261 Identities=24% Similarity=0.385 Sum_probs=205.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 88 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS---- 88 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc----
Confidence 3478999999999999999999999999999999986543333445678899999999999999999988733210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||+|++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 89 ------------------------------LDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred ------------------------------ccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 011245799999998899888764 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++..... ......+++.|+|||.+.+...++.++|+
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 199 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDS------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDI 199 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeeccccccccc------------------CccccccCCcccCHHHHhCCCCCCcHHHH
Confidence 999999999999999999999999999875321 11234678999999998764458899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||................... ...+...++.+.++|.
T Consensus 200 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 279 (343)
T cd07880 200 WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHH
Confidence 999999999996 776543322222211111100 0111234567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.||.+|||+.++++|+||...
T Consensus 280 ~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 280 KMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHcCCChhhCCCHHHHhcCccHhhh
Confidence 9999999999999999999999865
No 260
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.2e-33 Score=313.91 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=205.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 479999999999999999999999999999998864321 233456788999999999999999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||++ ++|.+++.....+++..++.++.||+.||.|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 77 ---------------------------------EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred ---------------------------------CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 489999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||||+||+++.++.++|+|||+++........ ....+...|+..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (264)
T cd06653 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------GTGIKSVTGTPYWMSPEVISG-EGYGRKA 190 (264)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc------------CccccccCCcccccCHhhhcC-CCCCccc
Confidence 999999999999999999999999999999864321100 001123568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||.............. ....+..+...++.+.++|.+||. +|..||++.+++.|||.
T Consensus 191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred cHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999999999996 7765544444433322 222222334456789999999999 57999999999999873
No 261
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-33 Score=316.96 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=196.5
Q ss_pred eEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.+.+.||+|+||.||+|.+..++. .+|+|.++...........+.+|+.+++.++||||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE------- 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-------
Confidence 456889999999999999987765 69999887655555556788999999999999999999988743210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh------cCCCCHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES------YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~------~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.......+++|||++ ++|.+++.. ...+++..++.++.||+.||+|
T Consensus 75 ---------------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 75 ---------------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred ---------------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 011235689999997 588887742 2348899999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~~~ 193 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY-------------YRQGRIAKMPVKWIAIESLAD-RVYTT 193 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-------------eecCCcccCCcccCCHHHccC-CCcCh
Confidence 9999999999999999999999999999999986532210 011123356778999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........... +. ....++.....+..+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 6655444333322 22 222233334556789999999999999999999999874
No 262
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-33 Score=317.06 Aligned_cols=255 Identities=29% Similarity=0.485 Sum_probs=201.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 467788999999999999999989999999988643211 1123467889999999999999999987622
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+++||||++ ++|.+++.....+++..+..++.||+.||
T Consensus 80 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 80 --------------------------------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 346799999996 59999998888899999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-C
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-K 611 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~ 611 (1196)
.|||+++++||||||+||+++.++.++|+|||+++...... .........|+..|+|||.+.... .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-------------~~~~~~~~~~~~~y~~PE~~~~~~~~ 188 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY-------------DNDQNMSMQGSVFWMAPEVIHSYSQG 188 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc-------------cccccccccCCccccCHHHhccccCC
Confidence 99999999999999999999999999999999997532110 001123456889999999987633 4
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++.++|+||||+++|+|++ ||......+......... ...+. .....+..+.++|.+||..+|.+|||++++++
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 7899999999999999997 665443333332222111 11222 12334678999999999999999999999999
Q ss_pred ccCC
Q 000993 686 DALP 689 (1196)
Q Consensus 686 ~~~~ 689 (1196)
|+|+
T Consensus 269 ~~~~ 272 (272)
T cd06629 269 HPFI 272 (272)
T ss_pred CCCC
Confidence 9985
No 263
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-33 Score=314.25 Aligned_cols=248 Identities=28% Similarity=0.518 Sum_probs=198.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+.+|+.+++.++|+||+++++++.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------- 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------- 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--------
Confidence 689999999999999999999999999999999875433 22335678999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||++ ++|..++.. ...+++.+++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (267)
T cd08224 74 --------------------------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 346799999997 599988854 3458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.
T Consensus 122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~ 185 (267)
T cd08224 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC---------------cccceecCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999987543211 01123468899999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||||||++|+|++ ||..... ......... ....++... ..+..+.++|.+||..+|.+|||+.+|++
T Consensus 186 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999996 6643321 111122222 222332222 45568999999999999999999999986
No 264
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.2e-34 Score=318.19 Aligned_cols=248 Identities=27% Similarity=0.512 Sum_probs=198.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|.++.+|+.||||.+..... ......++.+|+.+++.++||||++++++|.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--------
Confidence 678899999999999999999999999999998865432 23345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++++|||+++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 74 --------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3567999999975 89888763 3458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~ape~~~~-~~~~~ 185 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC---------------cccccccCCcCccCHHHhcC-CCccc
Confidence 999999999999999999999999999999987643211 01123468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|+||||+++|+|++ ||...... ......+. ....++ .....++.+.++|.+||..||.+|||+.+|++
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999996 66543221 12222222 222222 22345678999999999999999999998875
No 265
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.3e-34 Score=319.61 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.|+..+.||.|+||.||+|.+..+++.||+|.++... ......++.+|+.+++.++ ||||++++++|.+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~------- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK------- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------
Confidence 5778899999999999999999999999999987543 2334567889999999996 9999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||+++ +|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 74 ---------------------------------GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3467999999965 89888865 478999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.||+||||+|+||+++.++.++|+|||++....... .......|+..|+|||.+.+...++.++|
T Consensus 120 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 184 (277)
T cd06917 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------SKRSTFVGTPYWMAPEVITEGKYYDTKAD 184 (277)
T ss_pred CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---------------cccccccCCcceeCHHHhccCCccccchh
Confidence 999999999999999999999999999997653221 01223468899999999876455789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+|||||++|+|++ ||............. ....+.... ..+.++.+++.+||+.||.+||++.+++.|+|+.+..
T Consensus 185 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 185 IWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999996 776554333222111 111121111 2567899999999999999999999999999997764
No 266
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=348.64 Aligned_cols=258 Identities=25% Similarity=0.452 Sum_probs=202.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++++.+.|.+|||+.||+|++...|..||+|.+-.. +....+.+.+|+.+|+.|+ |||||.|++......
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~------ 108 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR------ 108 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc------
Confidence 3678899999999999999999988899999988654 4456778999999999996 999999997421100
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
........++|.||||. |+|-+++..+ .+|++.++++|+.|+++|+++||
T Consensus 109 ---------------------------~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 109 ---------------------------SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred ---------------------------cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 00011345789999998 6999999843 56999999999999999999999
Q ss_pred hCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc--cCcCccccccCCCchhccCC--C
Q 000993 537 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV--DGTGQVGTYFYTAPEIEQGW--P 610 (1196)
Q Consensus 537 s~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~--~ 610 (1196)
... |||||||-+||||+.+++.||||||.|+-....- +....... ..-....|+.|.|||.+.-+ .
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~--------~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP--------TSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCC--------ccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 998 9999999999999999999999999997432110 00000000 11223579999999975422 3
Q ss_pred CCCCcchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++|+|||+|||+||-|+ +||..... +.++..+..+|+. +.++..+.+||+.||++||.+||++.+++.+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 5899999999999999998 49976533 3345556666664 5667899999999999999999999999875
No 267
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-33 Score=315.35 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||+|+||.||+|.++.+++.||+|++... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--------- 73 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcC---------
Confidence 5789999999999999999999999999999988632 2234678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 74 -------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred -------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345689999996 5899988653 358999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++||||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+ ..++.++|
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NKFSIKSD 187 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCccccccccceee--------------ccCCCCCccccCCHHHhcc-CCCCchhH
Confidence 99999999999999999999999999999765322100 1112234678999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||......+.. ..+. ....++.....++++.++|.+||+.||++||++.++++.
T Consensus 188 v~slG~il~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 188 VWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 9999999999986 66544333322 2222 122223334566799999999999999999999999864
No 268
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-33 Score=317.94 Aligned_cols=257 Identities=26% Similarity=0.456 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+..+.||.|++|.||+|.+..+++.+|+|.+..... .....++.+|+++++.++||||++++++|.+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 71 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDE-------- 71 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc--------
Confidence 478999999999999999999998999999999875433 24557799999999999999999999887431
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+||||++ ++|.+++.. ...+++..+..++.||+.||+||
T Consensus 72 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l 121 (287)
T cd06621 72 ------------------------------SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121 (287)
T ss_pred ------------------------------CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2346899999997 488887643 34588999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+ ..++.+
T Consensus 122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----------------~~~~~~~~~y~~pE~~~~-~~~~~~ 183 (287)
T cd06621 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----------------AGTFTGTSFYMAPERIQG-KPYSIT 183 (287)
T ss_pred HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-----------------cccccCCccccCHHHhcC-CCCCch
Confidence 99999999999999999999999999999986542110 112357889999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH-----HHHHHHHHhhhc-CCCCCcc---ccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM-----ERQIVLSDLKQK-GELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~-----~~~~~~~~l~~~-~~~p~~~---~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+|||||||++|+|++ ||.... ..+......... ..++... ...++.+.++|.+||..||.+|||+.++
T Consensus 184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei 263 (287)
T cd06621 184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM 263 (287)
T ss_pred hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999999997 665431 111111111101 1111111 1234578999999999999999999999
Q ss_pred HhccCCCCchH
Q 000993 684 LQDALPPQMEY 694 (1196)
Q Consensus 684 L~~~~~~~~~~ 694 (1196)
++|+|+.+...
T Consensus 264 l~~~~~~~~~~ 274 (287)
T cd06621 264 LEHPWIKAQMK 274 (287)
T ss_pred HhCcccccccc
Confidence 99999976543
No 269
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-34 Score=348.61 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=192.2
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEe---------------cCCCCchhHHHHHHHHHHHHhcCCC
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIR---------------LKDKSLPVNDRILREVATLSRLQHQ 440 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~---------------~~~~~~~~~~~~~~Ev~iL~~L~Hp 440 (1196)
..+.++|++++.||+|+||+||+|.++... ..+++|.+. ...........+.+|+.+|+.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345689999999999999999999875432 222222111 0011222345688999999999999
Q ss_pred CeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CC
Q 000993 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DH 515 (1196)
Q Consensus 441 nIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~ 515 (1196)
|||++++++.. ....|++|+++.++|..++... ..
T Consensus 224 nIv~l~~~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~ 263 (501)
T PHA03210 224 NILKIEEILRS----------------------------------------EANTYMITQKYDFDLYSFMYDEAFDWKDR 263 (501)
T ss_pred CcCcEeEEEEE----------------------------------------CCeeEEEEeccccCHHHHHhhcccccccc
Confidence 99999988732 3467999999998888876432 23
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
.....++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+..... ......+
T Consensus 264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------------~~~~~~~ 329 (501)
T PHA03210 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--------------AFDYGWV 329 (501)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--------------ccccccc
Confidence 44667889999999999999999999999999999999999999999999986532110 1123457
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchh--HHHHHHHHHhhhcC----CCC-------------
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTA--MERQIVLSDLKQKG----ELP------------- 652 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~--~~~~~~~~~l~~~~----~~p------------- 652 (1196)
||+.|+|||++.+ ..++.++|||||||+||||++ ||... .........+.... .+|
T Consensus 330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~ 408 (501)
T PHA03210 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA 408 (501)
T ss_pred CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence 9999999999988 568999999999999999996 44321 11111111111000 001
Q ss_pred ----------Ccc--ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 653 ----------PSW--VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 653 ----------~~~--~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
+.. ......+.++|.+||+.||.+|||+.++|+||||.....+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence 000 1123456788999999999999999999999999876544
No 270
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.7e-33 Score=309.30 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=208.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|...+.||+|++|.||+|.+..+++.|++|++............+.+|+..+++++||||+++++.+.+.
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE--------- 71 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---------
Confidence 47788999999999999999999999999999976654445677899999999999999999999887431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....++++|||++ ++|.+++.....+++..++.++.|++.||+|||+.|+
T Consensus 72 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 72 -----------------------------EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred -----------------------------CCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 0256899999995 6999999888899999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||+|+||+++.++.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 188 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-------------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWS 188 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------ccccCCCCCccccCHhhhcC-CCCCchhhHHH
Confidence 99999999999999999999999999865432110 01123468899999999887 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+++|+|++ ||...................+......+..+.++|.+||+.||.+||++.++++|+|+
T Consensus 189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 189 LGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999997 77655422222222222223333333446789999999999999999999999999996
No 271
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-33 Score=312.72 Aligned_cols=242 Identities=22% Similarity=0.341 Sum_probs=189.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
+.||+|+||.||+|+++.+++.||+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--------------- 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------------
Confidence 3689999999999999999999999987532 233445679999999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+||||++ ++|.+++... ..+++..++.++.|++.||+|||++|++|||
T Consensus 65 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 65 -------------------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred -------------------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 345799999996 5899998754 4589999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||+
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i 185 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSREEEDGVY-------------ASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGIL 185 (252)
T ss_pred cchheEEEcCCCcEEECccccCcccccccc-------------cccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHH
Confidence 999999999999999999999875421100 000111223567999999887 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||++ ||.......... ... ....++.....+..+.+|+.+||+.+|++|||+.++++
T Consensus 186 l~e~~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 186 LWEAFSLGAVPYANLSNQQTRE-AIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHhCCCCCccccCHHHHHH-HHH-cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999985 565444333222 221 12222233345678999999999999999999999986
No 272
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.6e-33 Score=317.35 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=194.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|++.+.||+|+||.||+|.++. ++..||||++... .......++.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~---- 80 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ---- 80 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC----
Confidence 679999999999999999998752 3568999987532 223345678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------CCCHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWHL 524 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~i 524 (1196)
....++||||++ ++|.+++.... .++...+..+
T Consensus 81 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (277)
T cd05062 81 ------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQM 124 (277)
T ss_pred ------------------------------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHH
Confidence 345789999997 59999886532 3567788999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
+.|++.||+|||++|++||||||+||+++.++.+||+|||+++........ .......+++.|||||
T Consensus 125 ~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE 191 (277)
T cd05062 125 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSPE 191 (277)
T ss_pred HHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------ecCCCCccCHhhcChh
Confidence 999999999999999999999999999999999999999998754321110 0112235678899999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
++.+ ..++.++|||||||++|||++ ||............ . ....++.....++.+.+++.+||+.||.+|||+
T Consensus 192 ~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 268 (277)
T cd05062 192 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV-M-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 268 (277)
T ss_pred Hhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-H-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9987 568999999999999999985 66554443332222 2 222222233456789999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.+++++
T Consensus 269 ~e~l~~ 274 (277)
T cd05062 269 LEIISS 274 (277)
T ss_pred HHHHHH
Confidence 999874
No 273
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.6e-34 Score=319.73 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++... .......+.+|+++|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTE--- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEec---
Confidence 3578899999999999999998853 36789999986432 22345789999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------CCCCHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------DHFDKE 519 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------~~l~e~ 519 (1196)
....|++|||++ ++|.+++... ..+++.
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05049 80 -------------------------------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122 (280)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence 245799999996 5999998654 237888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.+..... ........+++.
T Consensus 123 ~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05049 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------YRVGGHTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc-------------eecCCCCcccce
Confidence 9999999999999999999999999999999999999999999999875422110 001123356789
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||............. .+..+......+..+.+++.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 190 WMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred ecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 999999987 568999999999999999995 766554444333332 2233333345667899999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+||++.++++.
T Consensus 267 ~Rp~~~eil~~ 277 (280)
T cd05049 267 QRINIKDIHER 277 (280)
T ss_pred cCCCHHHHHHH
Confidence 99999999863
No 274
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.7e-33 Score=317.50 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||.|+||+||+|++..+|+ .||+|+++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 3689999999999999999999887776 4899988643 333445678899999999999999999987732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (279)
T cd05109 81 -------------------------------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS 123 (279)
T ss_pred -------------------------------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 23578999997 6999988764 56999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (279)
T cd05109 124 YLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-------------EYHADGGKVPIKWMALESILH-RRFT 189 (279)
T ss_pred HHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc-------------eeecCCCccchhhCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001122345678999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......... ..+. ....++.....+.++.+++.+||+.||++||++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999875 66544333222 2222 333333445567789999999999999999999999853
No 275
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-33 Score=327.32 Aligned_cols=272 Identities=25% Similarity=0.384 Sum_probs=205.6
Q ss_pred CCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------------hHHHHHHHHHHHHhcCCCCeeeeee
Q 000993 381 NDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------VNDRILREVATLSRLQHQHVVRYYQ 447 (1196)
Q Consensus 381 ~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------------~~~~~~~Ev~iL~~L~HpnIV~l~~ 447 (1196)
++|.. .+.||.|+||+||+|.++.+++.||||++........ ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45554 4679999999999999999999999999875432210 0124778999999999999999998
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
++.. ..++|++|||++++|.+++.....+++..+..++.|
T Consensus 88 ~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~q 127 (335)
T PTZ00024 88 VYVE----------------------------------------GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQ 127 (335)
T ss_pred EEec----------------------------------------CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHH
Confidence 8732 346799999999999999988888999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++|++||||||+||+++.++.+||+|||+++.............. .............+++.|+|||.+.
T Consensus 128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD-ETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccc-ccccccccccccccccCCCCChhcc
Confidence 999999999999999999999999999999999999999865422211100000 0000111223446789999999988
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---------------------CC----ccccCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP----SWVAKF 659 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~----~~~~~~ 659 (1196)
+...++.++|+|||||++|||++ ||................... ++ .....+
T Consensus 207 ~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
T PTZ00024 207 GAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS 286 (335)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence 75557999999999999999997 665444333222211110000 00 012235
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++.++|++||+.+|.+|||+++++.|+||....
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6788999999999999999999999999998764
No 276
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-33 Score=319.00 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=204.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--------- 73 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---------
Confidence 357788999999999999999998999999999875432 3445678999999999999999999998743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|.+++.. +++++.++..++.|++.||+|||+++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 74 -------------------------------GTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3568999999975 89888864 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~ 185 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIQQ-SAYDSKADIW 185 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------cccccccCcccccCHhHhcc-CCCccHHHHH
Confidence 9999999999999999999999999997543211 11123468889999999887 4689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||++|||++ ||............ .....+......+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 186 SLGITAIELAKGEPPNSDMHPMRVLFLI--PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHHHHHHCCCCCCCcChHhHhhhh--hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 99999999997 66554443332221 11222323334456889999999999999999999999999987654
No 277
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.5e-33 Score=309.82 Aligned_cols=250 Identities=34% Similarity=0.582 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||.|+||.||++.+..+++.||+|++............+.+|+++++.++|||++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~---------- 70 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE---------- 70 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----------
Confidence 5889999999999999999999999999999998665555566788999999999999999999987732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+++|||+++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 71 ------------------------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999975 899988764 67999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (258)
T cd08215 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---------------DLAKTVVGTPYYLSPELCQN-KPYNYKS 184 (258)
T ss_pred hCCEecccCChHHeEEcCCCcEEECCccceeecccCc---------------ceecceeeeecccChhHhcc-CCCCccc
Confidence 9999999999999999999999999999997643221 01123478999999999887 4588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+||+|+++|+|++ ||.............. ...++.....+..+.+++++||..+|.+|||+.++++|||+
T Consensus 185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILK--GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999996 6755544433333322 22333233456789999999999999999999999999986
No 278
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.3e-34 Score=324.85 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=201.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+....||.|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~---------- 89 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV---------- 89 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee----------
Confidence 44455689999999999999999999999999875433 234568899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||+++ +|..++.. ..+++..++.++.||+.||+|||++|+
T Consensus 90 ------------------------------~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 90 ------------------------------GEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3567999999975 78776644 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||++..+.... .......|++.|+|||++.+ ..++.++||||
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 202 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-TPYGTEVDIWS 202 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhccccc---------------ccccceecCccccCHHHHcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01233578999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||......+...............+...++.+.++|++||+.+|.+||++.++++|+|+.+.
T Consensus 203 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 203 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999996 77654443333222111111122333456788999999999999999999999999987754
No 279
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.7e-33 Score=326.13 Aligned_cols=255 Identities=29% Similarity=0.488 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP------- 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-------
Confidence 4789999999999999999999999999999998865443334456788999999999999999999887431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|++|||++++|.+++.. .++++..+..++.||+.||+|||++|
T Consensus 82 --------------------------------~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 82 --------------------------------LEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred --------------------------------CCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235789999999899888764 46888999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||++..... ......+++.|+|||++.+...++.++|||
T Consensus 129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 190 (328)
T cd07856 129 VVHRDLKPSNILINENCDLKICDFGLARIQDP------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 190 (328)
T ss_pred cccCCCCHHHEeECCCCCEEeCccccccccCC------------------CcCCCcccccccCceeeeccCCcCcHHHHH
Confidence 99999999999999999999999999874321 112346788999999887645689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHH--------------------------hhhcCCCCC--ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSD--------------------------LKQKGELPP--SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~--------------------------l~~~~~~p~--~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||............ .......|. .....++.+.++|++
T Consensus 191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 99999999997 66433221111000 000001111 112345688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.+|.+|||+++++.|+|+...
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred HcCCChhhCCCHHHHhcCCccccc
Confidence 999999999999999999999754
No 280
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.5e-33 Score=318.37 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=194.3
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHH---HHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREV---ATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev---~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.||+|+||.||+|.+..+++.||+|++......... ...+..|. ..++...||||+++++++.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------- 67 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH------------- 67 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-------------
Confidence 489999999999999989999999998754322111 12233343 3444568999999987763
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+|+||||++ ++|.+++.....+++..++.++.|++.||+|||+++|+|
T Consensus 68 ---------------------------~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 68 ---------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred ---------------------------cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 2456899999996 589988888888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.+||+|||+++..... ......|+..|+|||++.+...++.++||||+|
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCcc-----------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 999999999999999999999998753211 112347899999999987644689999999999
Q ss_pred HHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCC
Q 000993 623 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 691 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~ 691 (1196)
|++|||++ ||..... ......... ..+..+...++++.+++++||..+|.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHhhc---cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 99999996 7765421 111111111 11222223467999999999999999999 9999999999998
Q ss_pred chHHHH
Q 000993 692 MEYELL 697 (1196)
Q Consensus 692 ~~~~~~ 697 (1196)
..+...
T Consensus 261 ~~~~~~ 266 (278)
T cd05606 261 LDWQMV 266 (278)
T ss_pred CCchHh
Confidence 775533
No 281
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-33 Score=328.61 Aligned_cols=272 Identities=28% Similarity=0.388 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+.+.||.|+||.||+|.++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~-- 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT-- 79 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc--
Confidence 3689999999999999999999999999999999876543 345678899999999999999999987643211000
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...........+|++|||++++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 80 ------------------------~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 80 ------------------------EDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred ------------------------cccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 00001123457899999999999888754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|+||||||+||+++. ++.+||+|||+++.+...... ........++..|+|||.+.+...++.++||
T Consensus 135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 202 (342)
T cd07854 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 202 (342)
T ss_pred cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------ccccccccccccccCHHHHhCccccCchhhH
Confidence 999999999999985 457899999999754321100 0001223678899999987654568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------CC---CC--CccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE---LP--PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------~~---~p--~~~~~~~~~l~~LI~~ 668 (1196)
|||||++|+|++ ||................ .. .+ ......+.++.+||.+
T Consensus 203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (342)
T cd07854 203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ 282 (342)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence 999999999996 776544333222211100 00 00 0112345678899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+||+..
T Consensus 283 ~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 283 ILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HhCCCchhccCHHHHhCCCccccc
Confidence 999999999999999999999754
No 282
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.9e-34 Score=318.44 Aligned_cols=245 Identities=29% Similarity=0.499 Sum_probs=191.5
Q ss_pred eEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 384 EELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++.+.||.|.||.||+|.+. ..+..|+||+++. .......+.+.+|++.+++++||||+++++++..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-------- 72 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-------- 72 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccc--------
Confidence 46789999999999999998 4467899999953 2344457889999999999999999999999853
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+++|||||+ |+|.+++... ..+++.+.+.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 73 --------------------------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp --------------------------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 223789999997 6999999876 67999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++|+||+++||+++.++.+||+|||++........ ........+...|+|||.+.+ ..++.++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ks 186 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-------------YKNDSSQQLPLRYLAPEVLKD-GEYTKKS 186 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-------------EEESTTSESGGGGS-HHHHHH-SEESHHH
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccccccc-ccccccc
Confidence 99999999999999999999999999999976521110 011233457789999999987 4589999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||+++|||++ ||......+..... . ....++.....+..+.++|.+||+.||.+|||+.++++
T Consensus 187 DVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 187 DVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-K-QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-H-TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccccccccccccccccccc-c-ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999999997 67665444433333 2 33333344456778999999999999999999999986
No 283
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-33 Score=335.89 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~ 453 (1196)
.++|.+.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|+.+. |||||+++++|.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 36788999999999999999987533 3479999986433 2334567999999999996 9999999998832
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 513 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 513 (1196)
...+|+|||||+ |+|.+++...
T Consensus 113 --------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T cd05105 113 --------------------------------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIF 154 (400)
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccccc
Confidence 345799999996 5898887542
Q ss_pred -----------------------------------------------------------------------------CCC
Q 000993 514 -----------------------------------------------------------------------------DHF 516 (1196)
Q Consensus 514 -----------------------------------------------------------------------------~~l 516 (1196)
..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 234 (400)
T cd05105 155 GINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGL 234 (400)
T ss_pred CCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCC
Confidence 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........+
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~ 301 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------YVSKGSTFL 301 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------ccccCCcCC
Confidence 7788899999999999999999999999999999999999999999999976432110 011123457
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
++.|+|||.+.+ ..++.++|||||||++|||++ ||............+... ..++.....++++.+++.+||+.
T Consensus 302 ~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG-YRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHCcc
Confidence 789999999987 568999999999999999984 665544333333333322 22333345667899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||++||++.++.+.
T Consensus 380 dP~~RPt~~~l~~~ 393 (400)
T cd05105 380 EPEKRPSFLHLSDI 393 (400)
T ss_pred CHhHCcCHHHHHHH
Confidence 99999999998763
No 284
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.8e-34 Score=329.11 Aligned_cols=261 Identities=19% Similarity=0.298 Sum_probs=197.6
Q ss_pred eeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
..||+| +||+||+|++..+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------------- 70 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT------------- 70 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------------
Confidence 356666 99999999999999999999987655554556788899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...+|++|||+. ++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 71 ---------------------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred ---------------------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346799999997 5899888764 3589999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 620 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwS 620 (1196)
||||||+|||++.++.++++||+.+............. ........++..|+|||++.+. ..++.++||||
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws 195 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV--------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc--------ccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence 99999999999999999999998765432211000000 0001112456789999998763 34789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC--------------------------------------------CC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------------------------PP 653 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------------------------p~ 653 (1196)
|||++|||++ ||............+...... .+
T Consensus 196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (328)
T cd08226 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275 (328)
T ss_pred HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence 9999999996 676544333332222111100 01
Q ss_pred ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 654 ~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
.....++.+.+||++||+.||.+|||++++++|+||.+....
T Consensus 276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 111234578899999999999999999999999998776544
No 285
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.4e-33 Score=317.85 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=202.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|...+.||.|++|.||++.+..+++.+|+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~---------- 87 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLV---------- 87 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEc----------
Confidence 44456799999999999999998999999999864332 334568899999999999999999987732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|+++||++ ++|.+++.. .++++..++.++.||+.||+|||++|+
T Consensus 88 ------------------------------~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 88 ------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ------------------------------CCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346799999996 599998877 679999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||
T Consensus 137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 200 (285)
T cd06648 137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWS 200 (285)
T ss_pred ecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------cccccccCCccccCHHHhcC-CCCCCcccHHH
Confidence 999999999999999999999999887542110 01123468999999999887 46899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||++|||++ ||..........................+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 201 lGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 201 LGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 9999999997 776554433333222211111112223567899999999999999999999999999987643
No 286
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.6e-33 Score=320.04 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC----------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG----------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g----------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 368899999999999999999887543 568999887432 234456788999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--------
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------- 514 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------- 514 (1196)
+++++|.. ...++++|||++ ++|.+++....
T Consensus 83 ~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05051 83 RLLGVCTV----------------------------------------DPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122 (296)
T ss_pred EEEEEEec----------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccc
Confidence 99988732 245799999996 58999987655
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 515 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 515 ---~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
.+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~ 189 (296)
T cd05051 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-------------YRVQ 189 (296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc-------------eeec
Confidence 689999999999999999999999999999999999999999999999999875432210 0112
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHhhh-----cCCCCCccccCCHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDLKQ-----KGELPPSWVAKFSE 661 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l~~-----~~~~p~~~~~~~~~ 661 (1196)
....+++.|+|||.+.+ ..++.++|||||||++|||++ ||............... .....+.....+.+
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 190 GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 23456789999999887 568999999999999999985 56544333332222111 01111222334578
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 662 QESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 662 l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.+++.+||+.||.+|||+.++++.
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999999999999999999999864
No 287
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.5e-33 Score=313.87 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=197.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|.+.+.||+|+||.||+|.+..+ +..||+|.++...........+.+|+..++.++||||+++++.+.+...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS----- 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc-----
Confidence 56778999999999999998754 4789999987655555556789999999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc------CCCCHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL 532 (1196)
.......+++|||++ ++|..++... ..+++..++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL 126 (273)
T cd05035 76 -----------------------------LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126 (273)
T ss_pred -----------------------------cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence 012346799999997 5898887432 3589999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||+++++||||||+||++++++.+||+|||+++........ .......++..|+|||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05035 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------RQGRIAKMPVKWIAIESLAD-RVY 192 (273)
T ss_pred HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc-------------cccccccCCccccCHhhccc-CCC
Confidence 9999999999999999999999999999999999865322110 11122345678999999876 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......+.... +. ....+......++.+.+++.+||+.||.+|||+.+++++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY-LR-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999985 6655444433322 22 222333334567799999999999999999999999875
No 288
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.1e-33 Score=313.01 Aligned_cols=245 Identities=22% Similarity=0.388 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--------- 70 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 455799998864332 24568999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+. ++|.+++... ..+++..++.++.||+.||+|||+.
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 71 -------------------------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234699999996 5899988764 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||||+||+++.++.+||+|||.++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di 184 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--------------TSSVGSKFPVRWSPPEVLLY-SKFSSKSDV 184 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCce--------------eecCCCccChhhCCHHHHhc-CcccchhHH
Confidence 999999999999999999999999999875422110 01122346678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||++|+|++ ||.............. ...++.....+..+.+++.+||+.||.+||++.+++.+
T Consensus 185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999986 6654444333333322 22222223346789999999999999999999999864
No 289
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.9e-33 Score=317.40 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=197.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|.++. .+..||+|.++... .......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3689999999999999999998752 35589999876432 23334568899999999999999999988632
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|++|||++ |+|.+++... ..++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 81 -------------------------------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred -------------------------------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 235699999996 6999998653 2346678889
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++....... ........++..|+||
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~p 190 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMAP 190 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------ccccCCCcccccccCH
Confidence 999999999999999999999999999999999999999999986432110 0111223467789999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|.+.+ ..++.++|+|||||++|||++ ||............. ....++.....++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99887 568999999999999999985 776554444332222 22222223344678999999999999999999
Q ss_pred HHHHHh------ccCCCCc
Q 000993 680 ATELLQ------DALPPQM 692 (1196)
Q Consensus 680 a~eiL~------~~~~~~~ 692 (1196)
+.++++ |++|...
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999986 5555543
No 290
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=310.38 Aligned_cols=271 Identities=27% Similarity=0.446 Sum_probs=217.5
Q ss_pred CCCcccCCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 375 PSSRYLNDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 375 ~~~~~~~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
..++|.+-|.+ .+.||+|+|+.|--|....+|..||||+|.+.. .....++.||++++.++ .|+||+++++.|
T Consensus 71 ~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefF--- 145 (463)
T KOG0607|consen 71 LSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFF--- 145 (463)
T ss_pred ccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHh---
Confidence 34555555555 357999999999999999999999999997542 23456899999999999 599999999776
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
++...+|+|||-|. |+|...|+++..|++.++.++..+|+.|
T Consensus 146 -------------------------------------Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~a 188 (463)
T KOG0607|consen 146 -------------------------------------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASA 188 (463)
T ss_pred -------------------------------------cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHH
Confidence 34678999999995 6999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc-
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ- 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~- 607 (1196)
|.|||.+||.||||||+|||-....+ +|||||.+..-+.....-. + ....+..+.+|+..|||||+..
T Consensus 189 LdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s----p----astP~L~tPvGSAEfMAPEVVd~ 260 (463)
T KOG0607|consen 189 LDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS----P----ASTPELLTPVGSAEFMAPEVVDV 260 (463)
T ss_pred HHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC----C----CCCccccCcccchhhcchhHHhh
Confidence 99999999999999999999876544 8999999987543222111 1 1122345679999999999853
Q ss_pred --C-CCCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHH
Q 000993 608 --G-WPKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESL 665 (1196)
Q Consensus 608 --~-~~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~~l~~L 665 (1196)
+ ...|+.++|.||||||||-|++ ||.+.- ....+..+...+..+|. .|..++.++++|
T Consensus 261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdl 340 (463)
T KOG0607|consen 261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL 340 (463)
T ss_pred hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHH
Confidence 2 2358999999999999999996 664321 12233344445566775 888999999999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
|+.+|..|+.+|.++.++++|||++....+
T Consensus 341 isnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 341 ISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHhccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999999999876543
No 291
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=365.46 Aligned_cols=253 Identities=31% Similarity=0.450 Sum_probs=211.4
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
..+||.|.||.||-|.+..+|...|+|-|+...........+.+|+.+|..++|||+|+|||+=++
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-------------- 1305 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-------------- 1305 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec--------------
Confidence 357999999999999999999999999998776656666788999999999999999999987432
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...++|.||||. |+|.+++...+-.++.....|..|++.|++|||.+||||||
T Consensus 1306 --------------------------Rekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1306 --------------------------REKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred --------------------------HHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 355789999996 69999998888888888999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchhHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLG 622 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDVwSlG 622 (1196)
|||.||+++.+|.+|++|||.|..+..+..+ +.-.....+|||.|||||++.+.. ....++||||||
T Consensus 1360 IK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~-----------~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1360 IKPANILLDFNGLIKYGDFGSAVKIKNNAQT-----------MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred CCccceeeecCCcEEeecccceeEecCchhc-----------CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 9999999999999999999999987654211 111234679999999999998732 256799999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|++.||+| ||...+..-..+..+. -+..|+.+...+++-+++|.+||..||.+|+++.|++.|.|-+
T Consensus 1429 CVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 99999998 8877665544444433 3445555555788999999999999999999999999997654
No 292
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.1e-33 Score=316.73 Aligned_cols=255 Identities=29% Similarity=0.444 Sum_probs=198.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|++.+.||.|+||.||+|+++.+++.||+|.++...........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~----- 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT----- 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-----
Confidence 6788999999999999999998899999999976544333345566788777666 69999999999854210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 76 ------------------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 76 ------------------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred ------------------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1123589999999999999887643 58999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
++++|+||||+||+++.++.+||+|||++..+.... ......+++.|+|||++.+ ..++.++|
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~D 188 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM----------------ALTSVVVTLWYRAPEVLLQ-SSYATPVD 188 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------ccccccccccccChHHhcc-CCCCCcch
Confidence 999999999999999999999999999987653211 0122357889999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC----------------CCCC--------ccccCCHHHHHHHHHcc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELPP--------SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p~--------~~~~~~~~l~~LI~~cL 670 (1196)
+|||||++|||++ ||......+.......... ..+. .....++.+.++|.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 9999999999996 6655444333222211100 0000 01123456789999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+||++.++++|+||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999996
No 293
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3e-33 Score=314.44 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 46899999999999999999998744 3789999976432 22344578899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|++|||++ ++|.+++... ..+++..++.
T Consensus 81 -------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 81 -------------------------------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 345799999996 6999988643 2367889999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||.|||+++++||||||+|||++.++.+||+|||+++........ .......+|..|+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMAP 190 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc-------------ccCCCCCccccccCH
Confidence 9999999999999999999999999999999999999999999865322110 111234567899999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|.+.+ ..++.++|||||||++|||++ ||......+... ... ....++.....+.++.++|.+||+.+|++|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 191 ESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-FVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-HHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 99876 568999999999999999986 665544443332 222 22233333345678999999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.++++.
T Consensus 268 ~~~l~~~ 274 (277)
T cd05032 268 FLEIVSS 274 (277)
T ss_pred HHHHHHH
Confidence 9999863
No 294
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-34 Score=353.38 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-C----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-G----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...++.+.||+|+||.||.|....- | ..||||.++ +..+.....+|++|..+|+.++|||||+++|++++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-RLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-ccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 4567789999999999999998643 2 248888876 334556778999999999999999999999999653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------CCCCHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQ 527 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~q 527 (1196)
...+|++|||. |+|..+|++. ..++......++.|
T Consensus 768 -------------------------------------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 768 -------------------------------------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred -------------------------------------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 23589999995 6999999865 24888899999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|+.|||++++|||||..+|+||+....+||+|||+|+.+...+..+. .....-...|||||.++
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~-------------~~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRK-------------HGEAMLPVKWMPPESLK 877 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheec-------------cCccccceecCCHHHHh
Confidence 99999999999999999999999999999999999999996543332211 11123456899999999
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
. ..++.|+|||||||+|||++| ||....+.++....+.. ++++ .+..++..+.++|..||+.+|++||++..|
T Consensus 878 d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-gRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 878 D-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-GRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred h-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-CccC-CCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 7 679999999999999999996 88888877776655543 3433 334566789999999999999999999999
Q ss_pred Hh
Q 000993 684 LQ 685 (1196)
Q Consensus 684 L~ 685 (1196)
+.
T Consensus 955 ~~ 956 (1025)
T KOG1095|consen 955 VE 956 (1025)
T ss_pred Hh
Confidence 97
No 295
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.3e-33 Score=312.60 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=198.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++.+ ...||||+++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------ 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec------
Confidence 6799999999999999999998754 4579999886432 33345678899999999999999999987632
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 77 ----------------------------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999998764 4689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.+
T Consensus 123 h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~Pe~~~~-~~~~~~ 188 (266)
T cd05033 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA-------------TYTTKGGKIPIRWTAPEAIAY-RKFTSA 188 (266)
T ss_pred HhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc-------------ceeccCCCCCccccChhhhcc-CCCccc
Confidence 999999999999999999999999999999987531110 001112345678999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+||||||+++|+|++ ||............ . ....++.....+..+.+++.+||+.+|++||++.+++++
T Consensus 189 ~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 189 SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-E-DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999985 77655444333222 2 222223334567789999999999999999999999875
No 296
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=333.34 Aligned_cols=263 Identities=27% Similarity=0.432 Sum_probs=225.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+.+++.+..||-|+||.|-++........+|+|++++... .....+.+..|-.+|..++.|.||++|..|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-------- 489 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-------- 489 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------
Confidence 35788889999999999999998875555699999987653 444567899999999999999999999776
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+..++|+.||-| +|.|+..++.++.|++..++.++..+++|++|||
T Consensus 490 --------------------------------rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 490 --------------------------------RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred --------------------------------ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH
Confidence 3467899999999 6799999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||+|||||+|+|++.+|.+||.|||+|+.+.... .+-++||||.|.|||++.. ...+.++
T Consensus 538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----------------KTwTFcGTpEYVAPEIILn-KGHD~av 600 (732)
T KOG0614|consen 538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----------------KTWTFCGTPEYVAPEIILN-KGHDRAV 600 (732)
T ss_pred hcCceeccCChhheeeccCCceEEeehhhHHHhccCC----------------ceeeecCCcccccchhhhc-cCcchhh
Confidence 9999999999999999999999999999999876443 2346899999999999988 4579999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|.|||||++|||++ ||...+++.....++..-..+ ..+..+...+.+||+++...+|.+|.. +.+|-+|.|
T Consensus 601 DyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 601 DYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999996 999998888777666543222 111344557899999999999999985 899999999
Q ss_pred CCCchHHHHHH
Q 000993 689 PPQMEYELLDN 699 (1196)
Q Consensus 689 ~~~~~~~~~~~ 699 (1196)
|.+..|+-+..
T Consensus 680 f~gfdweglr~ 690 (732)
T KOG0614|consen 680 FEGFDWEGLRS 690 (732)
T ss_pred hhcCChhhhhh
Confidence 99999886643
No 297
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.4e-33 Score=307.84 Aligned_cols=250 Identities=29% Similarity=0.461 Sum_probs=208.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+++++.++|||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET---------- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----------
Confidence 5788999999999999999999899999999997665444556789999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||+++ +|.+++.....+++..++.++.|++.||.|||++||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 71 ------------------------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 3467999999975 999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||||
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~ 184 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------DDASVVGTPYWMAPEVIEM-SGASTASDIWS 184 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------cccccccchhhcCHhhhcC-CCCCcchhHHH
Confidence 9999999999999999999999999986532210 0123468899999999887 44889999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+++|+|++ ||............. ....+......++.+.+++.+||..+|++|||+.+++.|+||
T Consensus 185 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 185 LGCTVIELLTGNPPYYDLNPMAALFRIV--QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHh--ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 9999999996 776555444333332 222333334556789999999999999999999999999986
No 298
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.6e-33 Score=312.35 Aligned_cols=245 Identities=24% Similarity=0.336 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-------- 72 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------
Confidence 478999999999999999999975 66789999876432 235678999999999999999999977622
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 73 --------------------------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5999988653 46888999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++
T Consensus 121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 185 (261)
T cd05072 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 185 (261)
T ss_pred HCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------eccCCCccceecCCHHHhcc-CCCChhh
Confidence 99999999999999999999999999999976432110 01122346778999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|+|++ ||............ ... ...+.....+.++.+++.+||..+|++||+++++++
T Consensus 186 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-QRG-YRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-HcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999996 67554443333222 212 222333456678999999999999999999999975
No 299
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.4e-34 Score=321.11 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=201.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+..+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK--------- 73 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc---------
Confidence 346677889999999999999998999999999874432 2345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 74 -------------------------------GTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred -------------------------------CCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3467999999975 88887754 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||++..+.... .......|+..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 185 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDFKADIW 185 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc---------------hhhhcccCcccccCHHHhCc-CCCchhhhHH
Confidence 9999999999999999999999999997643211 01123468899999999987 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++|||++ ||............ . ....+......+.++.++|.+||+.+|.+||++.++++|+|+...
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 186 SLGITAIELAKGEPPNSDLHPMRVLFLI-P-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHhhh-h-cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999997 55443333222211 1 112222222345688999999999999999999999999987654
No 300
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.6e-33 Score=316.50 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=194.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|.+..+++. +++|.+... .......++..|+..++.++||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------ 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------ 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------
Confidence 6889999999999999999999877764 677766422 22233467888899999999999999998762
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||++ |+|.+++.. ...+++..++.++.||+.||+|
T Consensus 80 -----------------------------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 124 (279)
T cd05111 80 -----------------------------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYY 124 (279)
T ss_pred -----------------------------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 123578999996 699999975 4568999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+|||++.++.+||+|||+++....... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~pE~~~~-~~~~~ 190 (279)
T cd05111 125 LEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------KYFYSEHKTPIKWMALESILF-GRYTH 190 (279)
T ss_pred HHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-------------ccccCCCCCcccccCHHHhcc-CCcCc
Confidence 9999999999999999999999999999999976432110 011223457788999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........ ...+ ..+..++.......++.+++.+||..||.+|||+.++++.
T Consensus 191 ~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 191 QSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 7765443332 2222 2334333333456688999999999999999999999763
No 301
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.5e-33 Score=314.00 Aligned_cols=248 Identities=27% Similarity=0.434 Sum_probs=196.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||.|+||.||+|.+..+|+.||+|+++..... ......+..|..+ ....+||||++++++|.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 68 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS------------- 68 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------------
Confidence 5689999999999999999999999998644321 1222334455444 445589999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+.+++||
T Consensus 69 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~ 121 (260)
T cd05611 69 ---------------------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121 (260)
T ss_pred ---------------------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||+|+||+++.++.+||+|||+++.... .....|++.|+|||.+.+ ..++.++||||||+
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~ 181 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------NKKFVGTPDYLAPETILG-VGDDKMSDWWSLGC 181 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccc-------------------cccCCCCcCccChhhhcC-CCCcchhhhHHHHH
Confidence 9999999999999999999999875321 123468889999999987 45899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCC---HHHHHhccCCCCchH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQMEY 694 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~~~ 694 (1196)
++|+|++ ||...................+.. ....++++.++|.+||+.||++||+ +++++.|+|+...++
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 9999996 776655544433332222222322 2245678999999999999999994 579999999987654
No 302
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.4e-33 Score=320.82 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=193.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++. .........+.+|+.++.++ +||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 47899999999999999999999878765 46666542 22334456788999999999 89999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKE 519 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~ 519 (1196)
...+|++|||++ ++|.+++.... .+++.
T Consensus 80 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 80 -----------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred -----------------------------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 345799999996 59999986542 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++..... .......++..
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~ 188 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVR 188 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh----------------hhcccCCCccc
Confidence 99999999999999999999999999999999999999999999998632100 01112234678
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||......+.... .. ....+......++++.+||.+||+.+|.
T Consensus 189 y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 189 WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred ccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-Hh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999877 458999999999999999985 6754443333222 21 1112223334567899999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+||++.+++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999976
No 303
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.5e-33 Score=314.74 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=208.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~ 458 (1196)
++|.+.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 479999999999999999999999999999999875332 2334567889999999998 999999987762
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|++|||+ +++|.+++.....+++..++.++.|++.||+|||+
T Consensus 73 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 73 --------------------------------DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred --------------------------------CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234679999999 56999999988889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC-----CCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-----PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|++|+||||+||+++.++.++|+|||++.............. ...............++..|+|||++.+ ..+
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~ 199 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPA 199 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCC
Confidence 9999999999999999999999999999986643321110000 0000000112234568899999999887 458
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~ 685 (1196)
+.++|+||||+++|++++ ||...................|. ..++.+.++|.+||+.+|.+||++ .++++
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 899999999999999996 77655543333333322333333 335689999999999999999999 99999
Q ss_pred ccCC
Q 000993 686 DALP 689 (1196)
Q Consensus 686 ~~~~ 689 (1196)
|+||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9997
No 304
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-33 Score=319.47 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=193.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC--------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG--------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g--------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~ 446 (1196)
++|++.+.||+|+||.||+|++..++ ..||+|+++.. ........+.+|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 58999999999999999999876432 35899988643 3334456799999999999999999999
Q ss_pred eeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----------
Q 000993 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------- 514 (1196)
Q Consensus 447 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------- 514 (1196)
+++.. ...+|+|||||+ ++|.+++....
T Consensus 84 ~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 84 GVCVS----------------------------------------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred EEEcC----------------------------------------CCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 88732 345699999997 59999886432
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcC
Q 000993 515 -HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593 (1196)
Q Consensus 515 -~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1196)
.+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... ......
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~ 190 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-------------YRIQGR 190 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------eeccCc
Confidence 367888999999999999999999999999999999999999999999999975421110 011123
Q ss_pred ccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHh---hh--cCCCCCccccCCHHHH
Q 000993 594 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQE 663 (1196)
Q Consensus 594 ~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~~l~ 663 (1196)
..+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+...... .. ...........++.+.
T Consensus 191 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (295)
T cd05097 191 AVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF 269 (295)
T ss_pred CcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence 356789999999887 568999999999999999985 776544433322211 11 1111222234567899
Q ss_pred HHHHHcccCCCCCCCCHHHHHhc
Q 000993 664 SLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|+.+||+.||.+||++++|++.
T Consensus 270 ~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 270 KLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999999863
No 305
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-33 Score=311.46 Aligned_cols=245 Identities=24% Similarity=0.404 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||+|+||.||+|.++ ++..+|+|++..... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTK--------- 70 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcC---------
Confidence 47889999999999999999987 567899998864332 23568889999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 71 -------------------------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred -------------------------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999996 5899998753 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di 184 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--------------TSSQGTKFPVKWAPPEVFDY-SRFSSKSDV 184 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcccceecccccc--------------cccCCCCCCccccCHHHhcc-CCCCchhhH
Confidence 999999999999999999999999999875432110 00112234568999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||++|||++ ||......+..... . ....++.....++++.+++.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 185 WSFGVLMWEVFSEGKMPYERFSNSEVVESV-S-AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHH-H-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999986 66554444333222 2 122222333467789999999999999999999999874
No 306
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-33 Score=318.76 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+.+|++.+.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--- 79 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--- 79 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---
Confidence 35688889999999999999988643 5789999987432 23345678899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
...+++++||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05091 80 -------------------------------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122 (283)
T ss_pred -------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345789999997 5888887532 2478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++........ .......++
T Consensus 123 ~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~ 189 (283)
T cd05091 123 PADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------KLMGNSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe-------------eeccCccCC
Confidence 8889999999999999999999999999999999999999999999998864322100 011233567
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05091 190 IRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR--NRQVLPCPDDCPAWVYTLMLECWNEF 266 (283)
T ss_pred ccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHhCCC
Confidence 89999999876 568999999999999999986 666655544433322 22223333456678999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|++.
T Consensus 267 p~~RP~~~~i~~~ 279 (283)
T cd05091 267 PSRRPRFKDIHSR 279 (283)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
No 307
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-33 Score=316.14 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=193.7
Q ss_pred ccCCceEEeee--ccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 379 YLNDFEELQPL--GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 379 ~~~~y~~~~~L--G~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+.++|++.+.+ |.|+||.||++.++.++..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 34567776666 99999999999999999999999987543221 122222222 79999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+++.....+++.+++.++.||+.||.|
T Consensus 81 ------------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~ 124 (267)
T PHA03390 81 ------------------------------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALND 124 (267)
T ss_pred ------------------------------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 346899999996 5999999887799999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||+.|++||||||+||+++.++ .++|+|||+++.... .....|+..|+|||++.+ ..++
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~-~~~~ 184 (267)
T PHA03390 125 LHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------PSCYDGTLDYFSPEKIKG-HNYD 184 (267)
T ss_pred HHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-------------------CccCCCCCcccChhhhcC-CCCC
Confidence 9999999999999999999998 999999999875421 122368899999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHcccCCCCCCCC-HHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-a~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||............+... ...++.+...++.+.++|.+||+.||.+||+ ++++|+|+|
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 99999999999999996 776443322211222111 2222333456789999999999999999996 699999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
|.+
T Consensus 265 ~~~ 267 (267)
T PHA03390 265 LKI 267 (267)
T ss_pred ccC
Confidence 864
No 308
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.4e-33 Score=316.85 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.+.||+|+||+||++.+. .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 57899999999999999999863 34567999987532 33445678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------CCCHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------HFDKELA 521 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------~l~e~~~ 521 (1196)
...+|++|||++ ++|.+++.... .+++..+
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred ------------------------------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 345799999997 59999886443 4899999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 601 (1196)
+.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.|+
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~ 189 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 189 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce-------------eecCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999975432110 01122345678999
Q ss_pred CchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 602 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 602 APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
|||++.+ ..++.++|||||||++|+|++ ||.............. ...++.....++++.+|+.+||+.||.+|
T Consensus 190 aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R 266 (288)
T cd05093 190 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPKEVYDLMLGCWQREPHMR 266 (288)
T ss_pred CHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999987 568999999999999999986 5655444443333322 22222233456789999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
||+.+++.
T Consensus 267 pt~~~v~~ 274 (288)
T cd05093 267 LNIKEIHS 274 (288)
T ss_pred CCHHHHHH
Confidence 99999975
No 309
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.2e-33 Score=308.68 Aligned_cols=247 Identities=30% Similarity=0.554 Sum_probs=204.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||++.++.+++.+|+|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----------
Confidence 5889999999999999999999999999999997655444556678899999999999999999877632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||+++ +|.+++.. ...+++..++.++.|++.||+|||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 71 ------------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred ------------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 89988865 356899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.|++|+||+|+||+++.++.+||+|||++...... ......+++.|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~ 182 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------MAKTQIGTPHYMAPEVWKG-RPYSYKS 182 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------CcccccCCccccCHHHHCC-CCCCchh
Confidence 999999999999999999999999999999765321 0122467889999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|+||||+++|+|++ ||............. ....++.....+.++.+++.+||+.+|.+||++.++++||+
T Consensus 183 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 99999999999986 776555443333222 23333333355678999999999999999999999999986
No 310
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.7e-33 Score=320.52 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=203.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------- 87 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-------- 87 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeee--------
Confidence 4789999999999999999999988999999999864332 335678899999999999999999987732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+|+||++ ++|.+++.+ ..+++..+..++.|++.||+|||++
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred --------------------------------CCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 345799999996 589888765 3588999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv 198 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------cccccccCChhhcCchhhcc-CCCCchhhH
Confidence 99999999999999999999999999987543211 11223468899999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||||++|+|++ ||....................+.....+..++++|++||..+|.+||++.+++.|+||....
T Consensus 199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999999999996 776544333222111111111112223456789999999999999999999999999997653
No 311
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.5e-33 Score=328.41 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|..+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 57899999999999999999853 467899999987433 233456788999999999 789999999877431
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...++++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T cd05103 84 -------------------------------------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126 (343)
T ss_pred -------------------------------------CCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccccc
Confidence 245789999997 5999888642
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 514 -----------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 514 -----------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
..++...+..++.||+.||+|||++||+|||||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 206 (343)
T cd05103 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206 (343)
T ss_pred ccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence 136777888999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|||||||++|
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPD-------------YVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcc-------------hhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 9999999999999999999976421110 011122346678999999887 56899999999999999
Q ss_pred Hhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 627 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 627 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|++ ||............+. ....++.....++++.+++.+||+.||.+|||+.++++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9985 6654332222222222 222222222345789999999999999999999999986
No 312
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-33 Score=315.30 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=191.4
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y-~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++| .+++.||+|+||+||++.. ..++..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 344 8899999999999988753 3568899999986432 223456788999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|++|||++ ++|.+++.. ..+++.+++.++.|++.||+|
T Consensus 79 -----------------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~ 122 (283)
T cd05080 79 -----------------------------------GGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAY 122 (283)
T ss_pred -----------------------------------CCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999997 589888865 459999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.
T Consensus 123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~-~~~~~ 189 (283)
T cd05080 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------YRVREDGDSPVFWYAVECLKE-NKFSY 189 (283)
T ss_pred HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh------------hccCCCCCCCceeeCHhHhcc-cCCCc
Confidence 99999999999999999999999999999999865321100 000122345677999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHH-------------HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQI-------------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~-------------~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
++||||||+++|||++ ||........ ...........++.....+.++.+++.+||+.||++||
T Consensus 190 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 190 ASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 9999999999999997 5532211100 00001111122222334567899999999999999999
Q ss_pred CHHHHHh
Q 000993 679 SATELLQ 685 (1196)
Q Consensus 679 ta~eiL~ 685 (1196)
|+.++++
T Consensus 270 s~~~i~~ 276 (283)
T cd05080 270 TFRSLIP 276 (283)
T ss_pred CHHHHHH
Confidence 9999986
No 313
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.8e-33 Score=320.42 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=203.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|+..+.||+|+||.||+|++..++..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 96 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------- 96 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--------
Confidence 457888999999999999999998999999999875432 33345678899999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||++|+|.+++.. ..++++.++..++.||+.||.|||++
T Consensus 97 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 144 (317)
T cd06635 97 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 144 (317)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999999988887754 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.. ...++.++
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 205 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 205 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------cccccCCccccChhhhhcCCCCCCCccc
Confidence 999999999999999999999999999864321 123468899999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|||++ ||.............. ....+......++.++++|.+||+.+|.+||++.++++|+|+...
T Consensus 206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999996 7765544433333322 222222233455689999999999999999999999999987543
No 314
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.3e-33 Score=316.28 Aligned_cols=254 Identities=26% Similarity=0.458 Sum_probs=207.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|+..+.||.|+||.||+|.+..++..||+|++..... ....+.+|+..++.++||||+++++++..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 3678888999999999999999998999999999975433 45678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+++||++ ++|.+++.... .++...++.++.||+.||+|||+
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 134 (286)
T cd06614 87 --------------------------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134 (286)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356799999998 69999998876 89999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+ ..++.++|
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 198 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---------------KRNSVVGTPYWMAPEVIKR-KDYGPKVD 198 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---------------hhccccCCcccCCHhHhcC-CCCCCccc
Confidence 9999999999999999999999999999875432110 1123457889999999887 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|||||++|+|++ ||..........................+..+.++|++||+.+|.+||++.++++|+|+.+.
T Consensus 199 v~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 199 IWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 9999999999997 76655443333322221111111222356789999999999999999999999999999874
No 315
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.6e-33 Score=315.76 Aligned_cols=248 Identities=29% Similarity=0.408 Sum_probs=197.4
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------------- 64 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET---------------- 64 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----------------
Confidence 69999999999999999999999998754322 2234456789999999999999999987622
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 65 ------------------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred ------------------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 356799999997 59999987655 799999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|+|+||+++.++.+||+|||++....... ......++..|+|||.+.+ ..++.++|||||||+
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 183 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGK----------------KIKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCT 183 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCC----------------ccccccCCCCcCCHHHhcC-CCCCchhhhHHHHHH
Confidence 99999999999999999999987643210 1123467889999999887 458999999999999
Q ss_pred HHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCch
Q 000993 625 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQME 693 (1196)
Q Consensus 625 LyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~ 693 (1196)
+|+|++ ||..... ......... ..........++.+.++|++||+.||.+|| ++.++++|+|+....
T Consensus 184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 999996 7754432 111111111 111112223467899999999999999999 899999999998876
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
+.
T Consensus 262 ~~ 263 (277)
T cd05577 262 WR 263 (277)
T ss_pred hh
Confidence 54
No 316
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.6e-33 Score=314.62 Aligned_cols=251 Identities=29% Similarity=0.454 Sum_probs=202.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
-|.+.+.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.++||||++++++|..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 73 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK---------- 73 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----------
Confidence 46788999999999999999998999999998864432 2345678899999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
..++|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.|+
T Consensus 74 ------------------------------~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 74 ------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred ------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 3568999999975 88887764 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||||+||+++.++.++|+|||++..+.... .......++..|+|||.+.+ ..++.++|+||
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~s 186 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWS 186 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccch---------------hhhccccCCccccChhhhcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 11123468889999999876 56789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|+|++ ||............. ....+......+.++.++|.+||+.+|.+||++.++++|+|+.+.
T Consensus 187 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 187 LGITAIELAKGEPPHSELHPMKVLFLIP--KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHHHHHHHcCCCCCCccchHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 9999999997 665544433332221 222222223456789999999999999999999999999998764
No 317
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.7e-33 Score=314.49 Aligned_cols=249 Identities=20% Similarity=0.295 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.+.||+|+||.||+|.+.. ++..||+|.++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 679999999999999999999986 6788999987633 223334578999999999999999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFRQ 527 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~q 527 (1196)
....|++|||++ ++|.+++.... .+++..++.++.|
T Consensus 81 ------------------------------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~q 124 (277)
T cd05036 81 ------------------------------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARD 124 (277)
T ss_pred ------------------------------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence 234589999996 59999987543 4889999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
|+.||+|||+++++||||||+||+++.++ .+||+|||+++........ ........++.|+|||
T Consensus 125 i~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE 191 (277)
T cd05036 125 VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-------------RKGGRAMLPIKWMPPE 191 (277)
T ss_pred HHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce-------------ecCCCCCccHhhCCHH
Confidence 99999999999999999999999998765 5999999999865221100 0111223457899999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
++.+ ..++.++|||||||++|||++ ||.............. . ..+......+..+.+++.+||+.+|++||++
T Consensus 192 ~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~ 268 (277)
T cd05036 192 AFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-G-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF 268 (277)
T ss_pred HHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-C-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 9987 568999999999999999985 7765544433322221 1 1222233456789999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.++++|
T Consensus 269 ~~vl~~ 274 (277)
T cd05036 269 ATILER 274 (277)
T ss_pred HHHHHH
Confidence 999986
No 318
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.3e-33 Score=317.13 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=196.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||++.++.. ...+|+|.+... ........+.+|+.+++.+ +||||+++++++.+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 36889999999999999999998743 378999988643 2333456788999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 516 (1196)
...+|++|||++ ++|.+++... ..+
T Consensus 88 --------------------------------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 129 (293)
T cd05053 88 --------------------------------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETL 129 (293)
T ss_pred --------------------------------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccccccc
Confidence 235799999996 5999988542 358
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+...... .......+
T Consensus 130 ~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~ 196 (293)
T cd05053 130 TQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------RKTTNGRL 196 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-------------eccCCCCC
Confidence 89999999999999999999999999999999999999999999999999865322110 11122345
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
+..|+|||++.+ ..++.++|||||||++|||++ ||......+.. ..+. ....+......+..+.+|+.+||..
T Consensus 197 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 273 (293)
T cd05053 197 PVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGYRMEKPQNCTQELYHLMRDCWHE 273 (293)
T ss_pred CccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHHH-cCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999877 568999999999999999985 66554333322 2222 2223333345567899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.+++++
T Consensus 274 ~p~~Rps~~eil~~ 287 (293)
T cd05053 274 VPSQRPTFKQLVED 287 (293)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999975
No 319
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.4e-33 Score=304.48 Aligned_cols=248 Identities=30% Similarity=0.546 Sum_probs=201.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+..+.||.|++|.||++.+..+++.+++|++..... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 68 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK---------- 68 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------
Confidence 58889999999999999999998999999999875433 345688999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....++++||++ ++|.+++... ..+++..++.++.|++.||+|||++|
T Consensus 69 ------------------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 69 ------------------------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 245799999998 5999998776 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~ 181 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----------------RNTMVGTPYWMAPEVING-KPYDYKADIW 181 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc----------------ccceecCCcccCHHHHcC-CCCCccccHH
Confidence 99999999999999999999999999976532210 123468899999999987 4588999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|||+++|+|++ ||....................+.....+..+.++|++||+.||.+|||+.++++|+|
T Consensus 182 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999999997 6665533333222222111111111222578999999999999999999999999987
No 320
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5e-33 Score=308.21 Aligned_cols=243 Identities=25% Similarity=0.348 Sum_probs=197.8
Q ss_pred eeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||+|.+... +..||+|.++...... ....+.+|+..++.++||||+++++++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------------ 67 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE------------ 67 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC------------
Confidence 3689999999999999866 8999999987544332 46788999999999999999999987632
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHH
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++|||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 68 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 68 ----------------------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred ----------------------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 346799999995 6999999875 67999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+ ..++
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 185 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-------------YRKKTGGKLPIRWMAPESLKD-GIFT 185 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------cccccCCCcCccccCHHHhcc-CCcc
Confidence 99999999999999999999999999999999986542210 011234567889999999887 4689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....... ...+......++++.+++.+||+.+|.+|||+.+++++
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999985 6766544443333222 22233334456799999999999999999999999875
No 321
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=327.64 Aligned_cols=248 Identities=31% Similarity=0.484 Sum_probs=189.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.....||+|+||.||+|... +|..||||.+....... ..+|.+|+.+|.+++|||+|+++|+|.+.+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 468888899999999999999987 55999999776433322 456999999999999999999999996531
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...++|+|||+ |+|.++|.... .++|....+|+.++|+||+|||
T Consensus 145 ---------------------------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH 191 (361)
T KOG1187|consen 145 ---------------------------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLH 191 (361)
T ss_pred ---------------------------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 14789999996 79999997655 8999999999999999999999
Q ss_pred hCC---CcccCCCcCcEEecCCCCeEEeccCcchhccc-cccccCCCCCCCCCCccccCcCc-cccccCCCchhccCCCC
Q 000993 537 GQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 s~g---IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~ 611 (1196)
... ||||||||+|||+|++.++||+|||+|+.... .. ..... .||.+|+|||++.. +.
T Consensus 192 ~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~----------------~~~~~~~gt~gY~~PEy~~~-g~ 254 (361)
T KOG1187|consen 192 EGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT----------------SVSTTVMGTFGYLAPEYAST-GK 254 (361)
T ss_pred cCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------ceeeecCCCCccCChhhhcc-CC
Confidence 864 99999999999999999999999999964321 10 01112 79999999999987 67
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhH---HH--HHHHHHhhhcCCC----CCccc--cC-----CHHHHHHHHHcccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAM---ER--QIVLSDLKQKGEL----PPSWV--AK-----FSEQESLLRRLMSP 672 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~---~~--~~~~~~l~~~~~~----p~~~~--~~-----~~~l~~LI~~cL~~ 672 (1196)
.+.|+|||||||+|.||++ |..... .. ............+ .+... .. ...+..+..+|++.
T Consensus 255 lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~ 334 (361)
T KOG1187|consen 255 LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRP 334 (361)
T ss_pred cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence 9999999999999999997 222111 10 1111111111111 11111 11 12356788899999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
+|.+||++.++++.
T Consensus 335 ~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 335 DPKERPTMSQVVKE 348 (361)
T ss_pred CCCcCcCHHHHHHH
Confidence 99999999998653
No 322
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.4e-33 Score=309.26 Aligned_cols=243 Identities=26% Similarity=0.361 Sum_probs=192.1
Q ss_pred eeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
++||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK------------- 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------------
Confidence 46999999999999886554 78999998754433 45567899999999999999999998651
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+++|||++ ++|.+++.....+++..++.++.|++.||+|||+++++|
T Consensus 67 ----------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 67 ----------------------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred ----------------------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 224689999996 599999988788999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG 185 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------YRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYG 185 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeecCCcc------------cccccCccccccccCHHHhcC-CCCCccchHHHHH
Confidence 999999999999999999999999865322100 001112234578999999887 5689999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||......+... .+. .....+.....++.+.++|.+||..+|.+||++.++++.
T Consensus 186 ~~l~~~~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 186 VTLWEAFSYGAKPYGEMKGAEVIA-MLE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCCCCcccCCHHHHHH-HHH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999985 665554433322 222 222223334456789999999999999999999999863
No 323
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.7e-33 Score=315.09 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=201.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|+..+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----------- 69 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----------- 69 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----------
Confidence 567789999999999999999999999999998654334445678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...+|+||||++++|.+++... ..+++..++.++.|++.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 70 -----------------------------ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120 (282)
T ss_pred -----------------------------CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3567999999999999999876 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||+|+||+++.++.+||+|||+++...... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~sl 185 (282)
T cd07829 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPL---------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185 (282)
T ss_pred cCCCChheEEEcCCCCEEEecCCcccccCCCc---------------cccCccccCcCcCChHHhcCCcCCCccccHHHH
Confidence 99999999999999999999999997643211 012234567889999998774478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhh------------------cCCCC--------CccccCCHHHHHHHHHcccC
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP--------PSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p--------~~~~~~~~~l~~LI~~cL~~ 672 (1196)
||++|||++ ||............... ....+ ......+..+.++|++||..
T Consensus 186 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 265 (282)
T cd07829 186 GCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY 265 (282)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhcc
Confidence 999999997 56543332222111110 00000 01112356789999999999
Q ss_pred CCCCCCCHHHHHhccCC
Q 000993 673 SPSDRPSATELLQDALP 689 (1196)
Q Consensus 673 dP~~RPta~eiL~~~~~ 689 (1196)
||.+||++.+++.||||
T Consensus 266 ~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 266 NPAKRISAKEALKHPYF 282 (282)
T ss_pred CcccCCCHHHHhhCcCC
Confidence 99999999999999997
No 324
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.5e-33 Score=311.44 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=203.5
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----------------
Confidence 6899999999999998999999999865432 2234567889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||++|++||||+
T Consensus 64 -----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 64 -----------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -----------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 2456899999996 5999999887889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++.......... ............++..|+|||.+.+ ..++.++||||||+++|
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQIN-------LNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILY 192 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccc-------cccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHH
Confidence 999999999999999999987543221100 0000112234568899999999887 45889999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHhccCCCCch
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALPPQME 693 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~~~~~~~~~ 693 (1196)
+|++ ||......+............+ .....++.+.+++++||+.+|.+|||+ .++++|+||..+.
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 193 EFLVGIPPFHGETPEEIFQNILNGKIEWP-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcCCcCCC-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 9997 7766555554443333222222 222246789999999999999999999 9999999998654
No 325
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-33 Score=315.52 Aligned_cols=252 Identities=27% Similarity=0.456 Sum_probs=201.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|++|.||+|.+..+|+.+|+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------------ 68 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR------------ 68 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc------------
Confidence 56778999999999999999999999999998765544445677889999999999999999997762
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|||+++|+
T Consensus 69 ----------------------------~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 69 ----------------------------HKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred ----------------------------cCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 23567999999999999888764 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|+||||+||+++.++.+||+|||.+....... .......++..|+|||.+.+...++.++|+|||
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~sl 185 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPV---------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------ccccCccCcccccCcHHHhcCCCCCchhHHHHH
Confidence 99999999999999999999999997653221 011234678899999998875468999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------C--------CCccccCCHHHHHHHHHccc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------L--------PPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~--------p~~~~~~~~~l~~LI~~cL~ 671 (1196)
|+++|+|++ ||......+.........+. + ...+...+.++.++|.+||+
T Consensus 186 G~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 265 (283)
T cd05118 186 GCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH 265 (283)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhc
Confidence 999999997 56443332222111111000 0 01122345678999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
.||.+||++.+++.|+|+
T Consensus 266 ~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 266 YDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCcccCcCHHHHhhCCCC
Confidence 999999999999999996
No 326
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.3e-33 Score=317.60 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++.++. .+++|.++. .......+.+.+|+.+++++ +||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------ 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc------
Confidence 689999999999999999999987765 468887752 22333456789999999999 79999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKEL 520 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~ 520 (1196)
...+|++|||++ ++|.+++.... .+++..
T Consensus 75 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 75 ----------------------------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred ----------------------------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 235799999997 59999986532 478899
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 521 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ........+..|
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~y 184 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------VKKTMGRLPVRW 184 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce----------------eccCCCCcCccc
Confidence 9999999999999999999999999999999999999999999998632110 011112335679
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+|||++.+ ..++.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.+|.+
T Consensus 185 ~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 185 MAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred cCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 99999887 568999999999999999985 7766555443333222 2222223346678999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
||+++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999865
No 327
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.8e-33 Score=309.79 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=189.6
Q ss_pred eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--------------- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--------------- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------------
Confidence 4899999999999875 345679999886432 3344567899999999999999999998761
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+++||||++ ++|.+++.. ...+++..++.++.||+.||+|||++|++||
T Consensus 66 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 119 (257)
T cd05115 66 --------------------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119 (257)
T ss_pred --------------------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 234689999997 589998874 4579999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++.+..... .....+...+++.|+|||++.+ ..++.++|||||||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ 186 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDS------------YYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGI 186 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCcc------------ceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHH
Confidence 9999999999999999999999975432110 0011122344678999999887 56899999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 624 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 624 iLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||++ ||.......... .+. .+..++.....++++.++|.+||..||++||++.+|.+.
T Consensus 187 ~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 187 TMWEAFSYGQKPYKKMKGPEVMS-FIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999984 776554444332 222 222233334557899999999999999999999999764
No 328
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-35 Score=306.94 Aligned_cols=271 Identities=24% Similarity=0.411 Sum_probs=209.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+.|+-+.+||+|.||+||+|+++.+|+.||+|++-..+.....-...++|+.+|..+.|+|++.+++.|-....
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~T---- 90 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT---- 90 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC----
Confidence 3467788899999999999999999999999999765433222233467899999999999999999987732210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+...+|+|+.+|..+|..++... .+|+..++.+++.++..||.|+|+
T Consensus 91 ----------------------------p~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr 142 (376)
T KOG0669|consen 91 ----------------------------PTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR 142 (376)
T ss_pred ----------------------------CcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 001234578999999999999999766 679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+.|+|||+||.|+||+.+|.+||+|||+|+.+......... ..+.++-|.+|.+||.+.|...|+++.|
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kp-----------rytnrvvTLwYrppEllLG~r~yg~~iD 211 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKP-----------RYTNRVVTLWYRPPELLLGDREYGPPID 211 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCC-----------CcccceeeeecCCHHHhhcccccCCcch
Confidence 99999999999999999999999999999876544322211 2356788999999999999999999999
Q ss_pred hHHHHHHHHHhhc--CC-chhHHHHHHHHHhhhcCCC-CCcccc-------------------------------CCHHH
Q 000993 618 MYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGEL-PPSWVA-------------------------------KFSEQ 662 (1196)
Q Consensus 618 VwSlGviLyELlt--Pf-~~~~~~~~~~~~l~~~~~~-p~~~~~-------------------------------~~~~l 662 (1196)
||..|||+.||+| |. .+..+.+...-+-...+.+ +..|++ ..+++
T Consensus 212 iWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a 291 (376)
T KOG0669|consen 212 IWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEA 291 (376)
T ss_pred hHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhH
Confidence 9999999999997 43 3333332221111101111 001110 11356
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+|+..+|..||.+|+++++++.|.||...
T Consensus 292 ~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 292 LDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred HHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 799999999999999999999999988654
No 329
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.3e-33 Score=315.20 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=194.5
Q ss_pred CceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-|.+++.||+|+||.||+|++ +.++..||+|.++... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 468899999999999999985 4568899999986432 334456799999999999999999999887331
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....|++|||++ ++|.+++.+. ..+++..++.++.||+.||+||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l 125 (284)
T cd05079 79 ---------------------------------GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125 (284)
T ss_pred ---------------------------------CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1245799999996 5999998764 3589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+||+++.++.+||+|||+++.+...... ........++..|+|||++.+ ..++.+
T Consensus 126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~apE~~~~-~~~~~~ 192 (284)
T cd05079 126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------YTVKDDLDSPVFWYAPECLIQ-SKFYIA 192 (284)
T ss_pred HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc------------eeecCCCCCCccccCHHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865322100 001123457788999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH--------------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM--------------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~--------------~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
+|||||||++|||++ |+.... ........+. .....+.+...+..+.+|+.+||+.||.+||
T Consensus 193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE-EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCCcccCc
Confidence 999999999999986 221100 0011111111 2222333445678999999999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 99999875
No 330
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.5e-33 Score=315.30 Aligned_cols=257 Identities=28% Similarity=0.423 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||.|+||.||+|.+..+++.||||.++..... .....+.+|+.++... .||||+++++++.+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT------- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec-------
Confidence 57899999999999999999999988999999998754332 2345667788777666 49999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||+++.+.+++.. ...+++..+..++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 86 ---------------------------------DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred ---------------------------------CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999888887765 4578999999999999999999997
Q ss_pred -CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CCCC
Q 000993 538 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKID 613 (1196)
Q Consensus 538 -~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~s 613 (1196)
.||+||||+|+||+++.++.+||+|||++..+.... ......+++.|+|||.+.+. +.++
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC----------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 599999999999999999999999999987643211 01223578899999998763 2378
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++||||||+++|+|++ ||...... +.....+.......+.....+.++.+||.+||+.||.+||+++++++|+|+
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 89999999999999997 77543322 222222222211112222356789999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
....
T Consensus 277 ~~~~ 280 (296)
T cd06618 277 RRYE 280 (296)
T ss_pred hccc
Confidence 8654
No 331
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=305.52 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=211.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++|.++++||+|+|.+|.+++++.|.+.||+|++++... ..+..+-+..|-.+..+. +||.+|.++.||
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-------- 320 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-------- 320 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------
Confidence 5899999999999999999999999999999999976432 223334455566666555 799999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+....+++|.||++ |+|.-.+++..+++++.++.+..+|+.||.|||
T Consensus 321 --------------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh 368 (593)
T KOG0695|consen 321 --------------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH 368 (593)
T ss_pred --------------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh
Confidence 34567899999997 589989999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||+||||.+|+|+|.+|++||+|+|+++.--.+ + -.++++||||.|.|||++.| ..|+.++
T Consensus 369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~------------g---d~tstfcgtpnyiapeilrg-eeygfsv 432 (593)
T KOG0695|consen 369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP------------G---DTTSTFCGTPNYIAPEILRG-EEYGFSV 432 (593)
T ss_pred hcCeeeeeccccceEEccCCceeecccchhhcCCCC------------C---cccccccCCCcccchhhhcc-cccCcee
Confidence 999999999999999999999999999999742111 1 12467899999999999999 6899999
Q ss_pred hhHHHHHHHHHhhc---CCc------hhHHHHH-HHHH-hhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC------C
Q 000993 617 DMYSLGIVFFELWH---PFS------TAMERQI-VLSD-LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP------S 679 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~------~~~~~~~-~~~~-l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP------t 679 (1196)
|+|+|||+++||+. ||. +..+.+. ..+. +....++|.+. +-.+..+++..|++||.+|. .
T Consensus 433 dwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl---svkas~vlkgflnkdp~erlgc~~~~g 509 (593)
T KOG0695|consen 433 DWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL---SVKASHVLKGFLNKDPKERLGCRPQTG 509 (593)
T ss_pred hHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee---ehhhHHHHHHhhcCCcHHhcCCCcccc
Confidence 99999999999994 875 1222222 2233 33333344433 33677899999999999996 4
Q ss_pred HHHHHhccCCCCchHHHHHH
Q 000993 680 ATELLQDALPPQMEYELLDN 699 (1196)
Q Consensus 680 a~eiL~~~~~~~~~~~~~~~ 699 (1196)
+.++-.|+||..+.|+.+..
T Consensus 510 ~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 510 FSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred hhhhhcchhhhhCCHHHHhh
Confidence 88999999999999997754
No 332
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.4e-32 Score=316.19 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+-|...++||.|+||+||+|++..+|+.||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 92 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-------- 92 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--------
Confidence 346667889999999999999999999999999875433 22344578899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++||||++++.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 93 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 140 (313)
T cd06633 93 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 140 (313)
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999999998888765 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
|++||||||+||+++.++.+||+|||++.... ......|+..|+|||++.. ...++.++
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~s 201 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKV 201 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecCCCcccC-------------------CCCCccccccccChhhccccCCCCCCchh
Confidence 99999999999999999999999999885321 1123468899999999852 24588899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||............... ..+. .....+..+++|+.+||+.+|.+||++.++++|+|+...
T Consensus 202 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 202 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 99999999999996 66655443333333221 1221 122344578999999999999999999999999999875
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 280 ~ 280 (313)
T cd06633 280 R 280 (313)
T ss_pred c
Confidence 4
No 333
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=8.2e-33 Score=348.25 Aligned_cols=149 Identities=30% Similarity=0.563 Sum_probs=133.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|.++++||+|+||+||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 75 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS------- 75 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------
Confidence 5789999999999999999999999999999999975432 23344678899999999999999999977632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..++|+|||||. ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~ 122 (669)
T cd05610 76 ---------------------------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122 (669)
T ss_pred ---------------------------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5999999888889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
++|+||||||+||||+.++.+||+|||+++.
T Consensus 123 ~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 123 HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999999999999999874
No 334
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.5e-33 Score=317.55 Aligned_cols=251 Identities=25% Similarity=0.424 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|...+.||.|+||.||+|+++.+++.+|+|.+.... .......++.+|+.+++.++|||++++++++..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 86 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--------
Confidence 45777889999999999999999999999999987532 233345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||+.+++.+++.. ...+++..++.++.|++.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 87 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred --------------------------------CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
+++||||||+||+++.++.+||+|||++..... .....|++.|+|||.+.+ ...++.++
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANXFVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcccceeecC-------------------cccccCCccccCHHHHhhcccCCCCccc
Confidence 999999999999999999999999999875321 123468889999999753 23578899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||.............. ...+. .....+..+.+||++||+.+|.+||++.++++|+|+...
T Consensus 196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred chHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 99999999999996 6655443333322222 12222 122345678999999999999999999999999998774
No 335
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.9e-33 Score=307.89 Aligned_cols=244 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. +++.||+|.++.... ....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 72 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTL--------- 72 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEec---------
Confidence 57899999999999999999976 567899999864332 24568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||++ ++|.+++.... .+++..+..++.|++.||.|||+
T Consensus 73 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (261)
T cd05068 73 -------------------------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121 (261)
T ss_pred -------------------------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999995 69999987654 68999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++....... ........+..|+|||++.+ ..++.++|
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 186 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------EAREGAKFPIKWTAPEAALY-NRFSIKSD 186 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--------------cccCCCcCceeccCcccccc-CCCCchhh
Confidence 9999999999999999999999999999986531110 00112233568999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+||||+++|||++ ||............ ..... ++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYR-MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCC-CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999996 67655444333322 22222 2223345678999999999999999999999986
No 336
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.6e-33 Score=310.91 Aligned_cols=245 Identities=26% Similarity=0.375 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.++||.|+||.||+|.++. ++.+|+|++.... ......+.+|+.+++.++||||+++++.+.+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 73 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--------- 73 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEec---------
Confidence 578999999999999999999986 8999999986433 2235678899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||+++ +|.+++... ..+++..++.++.||+.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~ 122 (261)
T cd05148 74 -------------------------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE 122 (261)
T ss_pred -------------------------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3457999999974 999998753 458999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||++....... .......++..|+|||++.+ ..++.++|
T Consensus 123 ~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~-~~~~~~~D 186 (261)
T cd05148 123 QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV---------------YLSSDKKIPYKWTAPEAASH-GTFSTKSD 186 (261)
T ss_pred CCeeccccCcceEEEcCCceEEEccccchhhcCCcc---------------ccccCCCCceEecCHHHHcc-CCCCchhh
Confidence 999999999999999999999999999997653211 01123346778999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||......+...... ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 187 iwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 187 VWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT--AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH--hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999985 676555444433332 222233344567789999999999999999999999863
No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.2e-33 Score=312.31 Aligned_cols=250 Identities=31% Similarity=0.472 Sum_probs=196.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|.+.+.||.|+||+||+|+...+++.||||.+...... .......+|+..++.++ ||||+++++++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~---------- 69 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE---------- 69 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc----------
Confidence 67789999999999999999988999999998654332 22334567999999999 9999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++++|.+.+.... .+++..+..++.|++.+|.|||++|
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 70 ------------------------------NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred ------------------------------CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34679999999889999887764 7899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||+++...... ..+...++..|+|||++.+...++.++|+|
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 183 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIW 183 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------CcCCCCCcccccCceeeecCcCcCCccchh
Confidence 9999999999999999999999999987542110 112346889999999986655689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCC--------CccccCCHHHHHHHHHc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELP--------PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p--------~~~~~~~~~l~~LI~~c 669 (1196)
|||+++|||++ ||................ ...+ ......++.+.++|++|
T Consensus 184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 263 (283)
T cd07830 184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM 263 (283)
T ss_pred hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence 99999999997 554332222111111000 0000 01112246789999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 264 l~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 264 LRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccCcccCCCHHHHhhCCCC
Confidence 99999999999999999996
No 338
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-32 Score=311.64 Aligned_cols=252 Identities=28% Similarity=0.442 Sum_probs=192.7
Q ss_pred CCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|++++.||+|+||.||+|.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 5789999999999999999984 457889999988643 334456788999999999999999999876321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++||||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 ----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~ 123 (284)
T cd05081 78 ----------------------------------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEY 123 (284)
T ss_pred ----------------------------------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 1245799999996 5999998754 468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+||+++.++.+||+|||+++........ ........++..|+|||++.+ ..++.
T Consensus 124 LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~ 190 (284)
T cd05081 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------YKVREPGESPIFWYAPESLTE-SKFSV 190 (284)
T ss_pred HHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc------------eeecCCCCCceEeeCHHHhcc-CCcCh
Confidence 99999999999999999999999999999999865321100 000112234557999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
++|||||||++|||++ |+....... .....+. ....++.....+.++.+||.+||+.+|++
T Consensus 191 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 191 ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999986 221110000 0011111 22222333445678999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.++++.
T Consensus 270 Rpt~~ei~~~ 279 (284)
T cd05081 270 RPSFSELALQ 279 (284)
T ss_pred CCCHHHHHHH
Confidence 9999999864
No 339
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8e-33 Score=316.50 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|.+.+.||+|+||.||+|.+. .++..||+|+++... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 468999999999999999999863 345689999886433 233456789999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
...+|++|||++ ++|.+++.... .+++.++..++.||+.
T Consensus 111 --------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 111 --------------------------------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 235799999997 69999987543 3899999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||+|||+++|+|+||||+|||++.++.+||+|||+++.+..... ........+++.|+|||.+.+ .
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~ 218 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFN-C 218 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------eeecCCCCcccccCCHhhhcc-C
Confidence 99999999999999999999999999999999999975432110 001122346788999999887 5
Q ss_pred CCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............. ....+......++++.+++.+||..+|++|||+.++++.
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 68999999999999999985 6654443333322222 222222233456789999999999999999999999864
No 340
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.5e-33 Score=313.21 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 3689999999999999999999753 5789999988643 233445678899999999999999999987732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 514 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 514 (1196)
...+|++|||++ ++|.+++....
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 80 -------------------------------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred -------------------------------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 345699999997 59999886431
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 515 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 515 ---~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
.+++..++.++.||+.||+|||+++++||||||+||+++.++.++|+|||+++.+...... ...
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~ 189 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KAS 189 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc-------------ccc
Confidence 3678889999999999999999999999999999999999999999999998754221100 001
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~ 667 (1196)
.....+..|+|||.+.+ ..++.++|||||||++|||++ ||......+..... . ....++.....+.++.+||.
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~ 266 (288)
T cd05050 190 ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV-R-DGNVLSCPDNCPLELYNLMR 266 (288)
T ss_pred CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHH
Confidence 12234677999999887 568999999999999999985 67655444433322 2 23333323345678999999
Q ss_pred HcccCCCCCCCCHHHHHh
Q 000993 668 RLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~ 685 (1196)
+||+.||.+|||+.++++
T Consensus 267 ~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 267 LCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999986
No 341
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.7e-33 Score=309.23 Aligned_cols=249 Identities=21% Similarity=0.336 Sum_probs=196.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------ 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578999999999999999999875543 79999886432 23345678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++ ++|.+++... ..++..+++.++.||+.||+||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 122 (267)
T cd05066 77 ----------------------------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122 (267)
T ss_pred ----------------------------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5899998764 4689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+|||++.++.++|+|||++........ .........++..|+|||.+.+ ..++.+
T Consensus 123 H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pe~~~~-~~~~~~ 189 (267)
T cd05066 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------AAYTTRGGKIPIRWTAPEAIAY-RKFTSA 189 (267)
T ss_pred HHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc------------eeeecCCCccceeecCHhHhcc-CccCch
Confidence 999999999999999999999999999999986532110 0011122344678999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|+|||||++||+++ ||......+..... . ....++.....++.+.+++.+||+.+|.+||++.++++
T Consensus 190 ~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 190 SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI-E-EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH-h-CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 999999999999874 66655443333222 2 22223333456678999999999999999999999986
No 342
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-32 Score=308.79 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=197.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+|++.+.||+|+||.||+|.++.+++ .||||++... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3578999999999999999999987765 6999988643 233445689999999999999999999987632
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++++|||++ ++|.+++... +.+++.+++.++.|++.||+|
T Consensus 77 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~ 121 (269)
T cd05065 77 -----------------------------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121 (269)
T ss_pred -----------------------------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345789999997 4899888753 568999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++......... . .........+..|+|||.+.+ ..++.
T Consensus 122 lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~--------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (269)
T cd05065 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--T--------YTSSLGGKIPIRWTAPEAIAY-RKFTS 190 (269)
T ss_pred HHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc--c--------cccccCCCcceeecCHhHhcc-Ccccc
Confidence 999999999999999999999999999999987653221000 0 000111223568999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||............ ...... +.....++.+.+++.+||..+|.+||++.++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRL-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcC-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999874 77655444333322 222222 2234556789999999999999999999999863
No 343
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-32 Score=306.12 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=192.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+.+.||+|+||.||++... |..||+|.++.. ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 71 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-------
Confidence 468999999999999999999875 888999987532 2245788999999999999999999876432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 72 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred --------------------------------CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999997 59999987644 4889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++..... .....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 180 (256)
T cd05082 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCEeccccchheEEEcCCCcEEecCCccceecccc------------------CCCCccceeecCHHHHcc-CCCCchh
Confidence 999999999999999999999999999998753211 112234568999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||++|||++ ||............ . ....+......++.+.++|.+||+.+|.+|||+.++++.
T Consensus 181 Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999985 66544333332222 1 122222233456789999999999999999999999863
No 344
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.4e-32 Score=307.45 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=192.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.++||+|+||.||+|++..+ ..||+|+++.... ....+.+|+.+++.++||||+++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------- 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS---------- 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC----------
Confidence 5799999999999999999998755 4699999874332 2356889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 120 (262)
T cd05071 72 -------------------------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120 (262)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 123589999997 5999998753 358899999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.+++||||||+||+++.++.+||+|||.++.+..... .......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~D 185 (262)
T cd05071 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (262)
T ss_pred CCccccccCcccEEEcCCCcEEeccCCceeecccccc--------------ccccCCcccceecCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999976532210 00112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||.............. .. .++.....+..+.+++.+||+.||.+||++.++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GY-RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CC-CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999997 6765544443332221 21 22223445678999999999999999999999875
No 345
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-32 Score=312.71 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=195.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---- 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----
Confidence 57899999999999999999864 2456789998753 233344678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDK 518 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e 518 (1196)
....++||||++ ++|.+++.... .+++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 122 (291)
T cd05094 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122 (291)
T ss_pred ------------------------------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCH
Confidence 345799999996 59999986532 3788
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~ 189 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPI 189 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------eecCCCCCcce
Confidence 99999999999999999999999999999999999999999999999975432110 01122345788
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||......+..... . ....+......+..+.+++.+||+.||
T Consensus 190 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 190 RWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI-T-QGRVLERPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred eecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-CCCCCCCCccCCHHHHHHHHHHcccCh
Confidence 9999999887 568999999999999999986 66554444333222 1 233333333456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 267 ~~Rpt~~~v~~~ 278 (291)
T cd05094 267 QQRLNIKEIYKI 278 (291)
T ss_pred hhCcCHHHHHHH
Confidence 999999999863
No 346
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.8e-32 Score=306.87 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=196.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|+..+.||+|+||.||+|+++.++. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 578889999999999999999986665 79999886432 23345678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++|||++ ++|.+++... ..+++.++..++.|++.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 78 ----------------------------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred ----------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345789999997 4898888754 5689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.|++||||||+||+++.++.+||+|||++........ ..........++.|+|||++.+ ..++.+
T Consensus 124 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~PE~~~~-~~~~~~ 190 (268)
T cd05063 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------------GTYTTSGGKIPIRWTAPEAIAY-RKFTSA 190 (268)
T ss_pred HHCCeeccccchhhEEEcCCCcEEECCCccceecccccc------------cceeccCCCcCceecCHHHhhc-CCcChH
Confidence 999999999999999999999999999999876432110 0011112234568999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||............ . .....+.....++.+.+++.+||+.+|.+||++.++++.
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI-N-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999875 77654443333222 2 222333334566789999999999999999999999864
No 347
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.4e-32 Score=306.46 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=193.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~--------- 71 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS--------- 71 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC---------
Confidence 368899999999999999999876 6677999998754332 356889999999999999999987651
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 72 --------------------------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred --------------------------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123589999997 5999988753 35899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 184 (260)
T cd05070 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 184 (260)
T ss_pred HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--------------ccccCCCCCccccChHHHhc-CCCcchh
Confidence 99999999999999999999999999999976432110 01112345678999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|+||||+++|+|++ ||......+..... . ....++.....+..+.+|+.+||..+|.+|||+.+++.
T Consensus 185 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 185 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV-E-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999986 66554443333322 2 22222333455678999999999999999999999874
No 348
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.8e-33 Score=318.00 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=194.5
Q ss_pred eeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+||+| ++|.||+++++.+++.||||+++...........+.+|+.+++.++||||++++++|.+
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-------------- 70 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-------------- 70 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--------------
Confidence 34444 55667777777789999999998664455566789999999999999999999988743
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....|++||||+ ++|.+++... ..+++..+..++.||+.||+|||+++|+|
T Consensus 71 --------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH 124 (314)
T cd08216 71 --------------------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH 124 (314)
T ss_pred --------------------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 345799999997 5898888753 45899999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSL 621 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSl 621 (1196)
|||||+||+++.++.+||+|||.+..+........ ..........++..|+|||++.+. ..++.++|||||
T Consensus 125 ~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~ 196 (314)
T cd08216 125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR--------VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSV 196 (314)
T ss_pred CCCCcceEEEecCCceEEecCccceeecccccccc--------ccccccccccccccccCHHHhcCCCCCCCcchhHHHH
Confidence 99999999999999999999999876532211100 001112334678899999998763 348899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcC-------CCCC------------------------ccccCCHHHHHHHH
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKG-------ELPP------------------------SWVAKFSEQESLLR 667 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~-------~~p~------------------------~~~~~~~~l~~LI~ 667 (1196)
||++|||++ ||................. ..+. .....+.++.+|+.
T Consensus 197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (314)
T cd08216 197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE 276 (314)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence 999999996 7775544333222221100 0000 00011246789999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||++|||+.++++|+||.++.
T Consensus 277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 277 LCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 99999999999999999999998663
No 349
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-32 Score=314.86 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
++|.+.+.||+|+||.||+|++.. ++..+|+|.++.. .......++.+|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 689999999999999999998753 2357999988743 2333456788999999999 79999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------C
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 515 (1196)
...+|+||||++ ++|.+++.... .
T Consensus 96 ---------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 96 ---------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999997532 4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++..+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++........ .......
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------~~~~~~~ 203 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------KKTTNGR 203 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-------------hccccCC
Confidence 788899999999999999999999999999999999999999999999998754321100 0112233
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|+|||++.+ ..++.++|||||||++|||++ ||......+ ....+. ....++.....+.++.+||.+||.
T Consensus 204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLK-EGHRMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHHH-cCCCCCCCCcCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 665433322 222222 222223334456789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+|||+.+++++
T Consensus 281 ~~p~~Rps~~evl~~ 295 (307)
T cd05098 281 AVPSQRPTFKQLVED 295 (307)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999875
No 350
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.4e-33 Score=328.33 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=195.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~ 454 (1196)
++|.+.++||+|+||.||+|++. .++..||+|+++.... ....+.+.+|+.+|..+. |||||+++++|..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~--- 112 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK--- 112 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc---
Confidence 57888899999999999999964 3456899999975432 233457889999999997 9999999998833
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 514 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 514 (1196)
...+|+|||||+ |+|.++++...
T Consensus 113 -------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T cd05107 113 -------------------------------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLIS 155 (401)
T ss_pred -------------------------------------CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccc
Confidence 235799999996 59999886431
Q ss_pred -------------------------------------------------------------------------------C
Q 000993 515 -------------------------------------------------------------------------------H 515 (1196)
Q Consensus 515 -------------------------------------------------------------------------------~ 515 (1196)
.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T cd05107 156 GGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPA 235 (401)
T ss_pred cccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCC
Confidence 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...++.++.||+.||+|||+.+++||||||+|||++.++.+||+|||+++.+..... ........
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~ 302 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-------------YISKGSTF 302 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc-------------cccCCCcC
Confidence 56677889999999999999999999999999999999999999999999976422110 00112345
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+.....+. ....++.+...+.++.+|+.+||.
T Consensus 303 ~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl~ 380 (401)
T cd05107 303 LPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCWE 380 (401)
T ss_pred CCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 7889999999987 568999999999999999985 6654443333333322 222233334456799999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+||++.+|++.
T Consensus 381 ~~P~~RPs~~ell~~ 395 (401)
T cd05107 381 EKFEIRPDFSQLVHL 395 (401)
T ss_pred CChhHCcCHHHHHHH
Confidence 999999999999874
No 351
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-32 Score=304.73 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=192.8
Q ss_pred eeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~-~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|++|.||+|.+.. +++ .||||.+...... ...+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL------------- 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc-------------
Confidence 368999999999999865 333 6999998754433 55678999999999999999999998762
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
. ..++++|||++ ++|.+++.... .+++..++.++.||+.||+|||++|+
T Consensus 67 ---------------------------~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 67 ---------------------------T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ---------------------------C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 45799999996 69999987654 68999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||+++.+..... .........++..|+|||.+.+ ..++.++||||
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~s 185 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNED------------HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWM 185 (257)
T ss_pred cccccCcccEEEecCCEEEecccccccccccccc------------ceecccCCCCCceecCHHHhcc-cCcCchhhhHH
Confidence 9999999999999999999999999987532210 0011123457889999999887 56899999999
Q ss_pred HHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 621 LGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 621 lGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||++|||++ ||......+....... .....+.....+..+.+++.+||+.+|.+||++.++++.
T Consensus 186 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 9999999986 7755444443333222 222222223456789999999999999999999999863
No 352
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-32 Score=314.46 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=194.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 468899999999999999999863 23457999987632 2234456789999999999 89999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------C
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 514 (1196)
...+|++|||++ ++|.+++... .
T Consensus 93 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 132 (304)
T cd05101 93 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE 132 (304)
T ss_pred ----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence 345799999997 5999998753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.++...+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... .......
T Consensus 133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------~~~~~~~ 199 (304)
T cd05101 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------YKKTTNG 199 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-------------cccccCC
Confidence 467788999999999999999999999999999999999999999999999976532110 0112233
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+++.|+|||++.+ ..++.++||||||+++|+|++ ||......+.. ..+... ..+......+..+.+|+.+||
T Consensus 200 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF-KLLKEG-HRMDKPANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-HHHHcC-CcCCCCCCCCHHHHHHHHHHc
Confidence 56788999999987 568999999999999999986 55444333332 222222 222223456678999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
..+|.+|||+.++++.
T Consensus 277 ~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRPTFKQLVED 292 (304)
T ss_pred ccChhhCCCHHHHHHH
Confidence 9999999999999975
No 353
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-32 Score=312.81 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=191.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
++|++.+.||+|+||.||+|.+.. ++..+|+|++... .......++.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 578999999999999999986542 3457999988643 23334567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 514 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 514 (1196)
+++++.. ...+|++|||++ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 84 LLAVCIT----------------------------------------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred EEEEEec----------------------------------------CCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 9988733 234699999996 59999886532
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCc
Q 000993 515 --HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592 (1196)
Q Consensus 515 --~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1196)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.+..... .....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~ 190 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY-------------YRIQG 190 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc-------------eeccC
Confidence 366788999999999999999999999999999999999999999999999975432110 00111
Q ss_pred CccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHh---hh--cCCCCCccccCCHHH
Q 000993 593 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQ 662 (1196)
Q Consensus 593 ~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~~l 662 (1196)
...+++.|+|||...+ ..++.++|+|||||++|||++ ||......+...... .. .....+.....++.+
T Consensus 191 ~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 191 RAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred cCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHH
Confidence 2345678999998776 568999999999999999985 675544333222110 00 111122233455789
Q ss_pred HHHHHHcccCCCCCCCCHHHHHh
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.+|+.+||+.||.+||++.+|++
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999976
No 354
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-32 Score=310.27 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+|.+.++||+|+||.||+|... .++..+|+|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHIVRFYGVCTE---- 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc--CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec----
Confidence 57888999999999999999753 3467899998753 333455689999999999999999999987732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------------CCCHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------HFDKE 519 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------~l~e~ 519 (1196)
....|++|||++ ++|.+++.... .+++.
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05092 79 ------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122 (280)
T ss_pred ------------------------------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHH
Confidence 345799999997 59999886542 47889
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.++.++.||+.||+|||++|++||||||+|||+++++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05092 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------eecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999975421110 011122346788
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||.+.+ ..++.++|||||||++|||++ ||............. ....+......++.+.++|.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 190 WMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred ccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999887 568999999999999999985 665444433332222 2222233345677899999999999999
Q ss_pred CCCCHHHHHh
Q 000993 676 DRPSATELLQ 685 (1196)
Q Consensus 676 ~RPta~eiL~ 685 (1196)
+||++.++++
T Consensus 267 ~Rp~~~~l~~ 276 (280)
T cd05092 267 QRMVIKDIHS 276 (280)
T ss_pred hCCCHHHHHH
Confidence 9999999985
No 355
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=297.35 Aligned_cols=263 Identities=24% Similarity=0.352 Sum_probs=200.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|.+.+.||+|||+.||++++..++..||+|++.... .+..+..++|+...++++|||++++++..+...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~------ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE------ 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh------
Confidence 468999999999999999999999999999999997654 356778999999999999999999987653321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.......||++.|.. |+|.+.++.. ..+++.+++.++.+|++||++
T Consensus 92 -----------------------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~ 142 (302)
T KOG2345|consen 92 -----------------------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEA 142 (302)
T ss_pred -----------------------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHH
Confidence 012456899999985 7999988643 469999999999999999999
Q ss_pred HHhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--C
Q 000993 535 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--P 610 (1196)
Q Consensus 535 LHs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~ 610 (1196)
||+.. ++||||||.|||+.+++.++|.|||.++.....-..+.... .--+......|..|.|||.+.-+ .
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~------~lQe~a~e~Ct~pyRAPELf~vk~~~ 216 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQAL------RLQEWAEERCTIPYRAPELFNVKSHC 216 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHH------HHHHHHHHhCCCcccCchheecccCc
Confidence 99998 99999999999999999999999999985421110000000 00011233567889999987642 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..+.++|||||||+||+|+. ||......-..+.....++ .+|.. ...+..+.++|+.||+.||.+||++.+++.
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 47899999999999999984 8865443211111111122 23332 236678899999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
+
T Consensus 296 ~ 296 (302)
T KOG2345|consen 296 K 296 (302)
T ss_pred H
Confidence 5
No 356
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-32 Score=303.71 Aligned_cols=241 Identities=23% Similarity=0.368 Sum_probs=195.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ...++.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 71 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------- 71 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--------
Confidence 468899999999999999999875 89999999864322 45678999999999999999999988632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+||||++ ++|.+++.... .+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 72 --------------------------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred --------------------------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997665 6999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++...... ....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------~~~~~~~~~~ape~~~~-~~~~~~~ 180 (256)
T cd05039 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------DSGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCccchhcccceEEEeCCCCEEEccccccccccccc------------------ccCCCcccccCchhhcC-CcCCcHH
Confidence 9999999999999999999999999999997642111 12234567999999876 5688999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|||++ ||.......... .+... ..+......++.+.++|++||..+|.+||++.++++.
T Consensus 181 Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVP-HVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999985 665554333322 22211 1222223456789999999999999999999999864
No 357
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.3e-32 Score=304.76 Aligned_cols=244 Identities=26% Similarity=0.369 Sum_probs=194.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||.|+||.||+|..+ +++.||+|.+..... ...++.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 71 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT--------- 71 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc---------
Confidence 368999999999999999999876 678899999874333 2457889999999999999999987641
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||+. ++|.+++... ..+++.+++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 72 --------------------------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred --------------------------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 124689999996 5999988653 46899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (260)
T cd05067 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 184 (260)
T ss_pred cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------ccccCCcccccccCHHHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01123346788999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||+++|||++ ||........... +. ....++.....+.++.++|.+||+.+|.+||++++++.
T Consensus 185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred chHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999996 7765444333222 22 22222333345678999999999999999999999975
No 358
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-33 Score=326.73 Aligned_cols=337 Identities=22% Similarity=0.303 Sum_probs=235.6
Q ss_pred ccCCcccchhhhhHHHHHHHHHHhhcccCCCcccHHHHHHH--HHhcCCCC--ccccCcCCCCcccccc---hhhHHHhh
Q 000993 278 SLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATE--LYNLGIFS--ERGRDLASKPSSQFNK---TFNQVFHQ 350 (1196)
Q Consensus 278 ~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~~~~~~~~~~--l~~l~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 350 (1196)
.++.-+--..++.+++..-..++.+|+-|..|+..-++.+. +..+..-. ...++.++++..-..+ .|...+..
T Consensus 203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~ 282 (612)
T KOG0603|consen 203 ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTS 282 (612)
T ss_pred ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhcc
Confidence 34444555578999999999999999998877544333222 12222111 1112333444332211 11111100
Q ss_pred hhccccccCCcCCCCCCC------------CCC--CCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEec
Q 000993 351 KMVSSRVSQFWKPSVDSG------------SPN--MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL 416 (1196)
Q Consensus 351 ~~~s~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~ 416 (1196)
..+...+....+. .+. .......+.++|++...+|.|+|+.|-.|.+..+++.+++|++..
T Consensus 283 -----~~P~dsp~~~~~~s~~~if~g~sfva~~il~~~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~ 357 (612)
T KOG0603|consen 283 -----QVPADSPLLSASGSDHTIFSGPSFVAPGVLEDAVTAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISK 357 (612)
T ss_pred -----CCcccCCCCCCCccccchhcCCCccChHHhhccccCCcchhhccccccCCCCccceeeeeccccccchhheeccc
Confidence 0110000000000 011 011234567899999999999999999999999999999999975
Q ss_pred CCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEE
Q 000993 417 KDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495 (1196)
Q Consensus 417 ~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 495 (1196)
.. .+..+|+.++... +||||+++++.+. +..+.
T Consensus 358 ~~------~~~~~e~~~~~~~~~h~niv~~~~v~~----------------------------------------~~~~~ 391 (612)
T KOG0603|consen 358 RA------DDNQDEIPISLLVRDHPNIVKSHDVYE----------------------------------------DGKEI 391 (612)
T ss_pred cc------cccccccchhhhhcCCCcceeecceec----------------------------------------CCcee
Confidence 42 1234567555544 8999999998872 35678
Q ss_pred EEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEe-cCCCCeEEeccCcchhccccc
Q 000993 496 YIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF-DARNDIKIGDFGLAKFLKLEQ 573 (1196)
Q Consensus 496 ~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILl-d~~~~vKL~DFGlA~~~~~~~ 573 (1196)
|+|||++.| -+.+.+.....+. .++..|+.+|+.|+.|||++||+||||||+|||+ ++.++++|+|||.++.....
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999999975 5555555555455 7888899999999999999999999999999999 58899999999999865322
Q ss_pred cccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC
Q 000993 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE 650 (1196)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~ 650 (1196)
..+.+-|..|.|||++.. ..|++++||||||++||+|++ ||............ ..
T Consensus 470 -----------------~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~----i~ 527 (612)
T KOG0603|consen 470 -----------------CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR----IQ 527 (612)
T ss_pred -----------------hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh----hc
Confidence 123477899999999996 789999999999999999996 66655444222222 22
Q ss_pred CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 651 LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 651 ~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++.-...+.++++||..||+.||.+||++.+++.|+|+
T Consensus 528 ~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 528 MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 233335678899999999999999999999999999999
No 359
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1e-32 Score=314.17 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=198.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
....+||+|+||.||++.++.+|+.||||++... .......+.+|+.+++.++||||+++++.+..
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------------ 88 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV------------ 88 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEe------------
Confidence 3346799999999999999999999999988543 22345678999999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
..+.|++|||+++ +|.+++. ...+++..++.++.|++.||+|||++|++|
T Consensus 89 ----------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH 139 (292)
T cd06657 89 ----------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIH 139 (292)
T ss_pred ----------------------------CCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3568999999975 7877664 456899999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||||
T Consensus 140 ~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG 203 (292)
T cd06657 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLG 203 (292)
T ss_pred CCCCHHHEEECCCCCEEEcccccceeccccc---------------ccccccccCccccCHHHhcC-CCCCchhhHHHHH
Confidence 9999999999999999999999986542110 01223468899999999876 5678999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+++|+|++ ||..........................++.+.+++.+||+.||.+||++.++++|+||....
T Consensus 204 vil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 204 IMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 99999996 776544333222111111111122334567899999999999999999999999999987653
No 360
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-32 Score=310.50 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||.|+||.||+|.+. .+|+.||+|+++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 4788999999999999999985 4789999999874321 222346788899999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+||||++ ++|.+++.....+++..+..++.||+.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~ 120 (290)
T cd05613 76 -----------------------------------TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120 (290)
T ss_pred -----------------------------------cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
||++|++||||||+|||++.++.+||+|||+++....... .......|+..|+|||.+.+. ..++
T Consensus 121 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (290)
T cd05613 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------ERAYSFCGTIEYMAPDIVRGGDGGHD 186 (290)
T ss_pred HHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc--------------cccccccCCcccCChhhccCCCCCCC
Confidence 9999999999999999999999999999999975432110 111235689999999998752 2467
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 682 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~e 682 (1196)
.++||||||+++|+|++ ||..... ......... . ..++......+.+.+++++||+.||.+|| ++++
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~ 264 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL-K-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE 264 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh-c-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence 89999999999999997 6642211 111111111 1 11222234567889999999999999997 8999
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
++.|+||....++.+
T Consensus 265 l~~~~~~~~~~~~~~ 279 (290)
T cd05613 265 IKKHPFFQKINWDDL 279 (290)
T ss_pred HHcCcccccCCHHHH
Confidence 999999999887544
No 361
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-32 Score=307.02 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|+.++.||.|+||.||+|+++.+ .+.||+|.+.... .......+.+|+.+++.++||||+++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 5789999999999999999997643 4679999875322 22345679999999999999999999987622
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------CCCHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------HFDKELAWHLF 525 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------~l~e~~~~~i~ 525 (1196)
....|+||||++ ++|.+++.... .+++..+..++
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 80 ------------------------------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ------------------------------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 345699999997 69999997655 68999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
.||+.||+|||+++|+||||||+||+++.++.++|+|||+++...... ........++..|+|||.
T Consensus 124 ~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 124 TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--------------YYKLRNALIPLRWLAPEA 189 (275)
T ss_pred HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc--------------ccccCCceeEEeecChhh
Confidence 999999999999999999999999999999999999999987432111 111233467788999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
+.+ ..++.++||||||+++|+|++ ||...................+ .....+..+.+++.+||+.+|.+||++.
T Consensus 190 ~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 190 VQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 887 467899999999999999985 7765544443333222121111 2234567899999999999999999999
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
++++.
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99875
No 362
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.2e-32 Score=310.36 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=192.4
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+|.+.+.||+|+||.||+|.+.. ....+|+|.+... .......++.+|+.+++.++||||++++++|.+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 47788999999999999998753 2357888887633 233445678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------------
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 513 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 513 (1196)
....|++|||++ ++|.+++...
T Consensus 75 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (290)
T cd05045 75 -----------------------------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119 (290)
T ss_pred -----------------------------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCc
Confidence 234689999997 5899887642
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 514 --DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 514 --~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
..+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+|||+++....... ....
T Consensus 120 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~ 186 (290)
T cd05045 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS-------------YVKR 186 (290)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc-------------hhcc
Confidence 2478889999999999999999999999999999999999999999999999975422110 0111
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~ 667 (1196)
....++..|+|||++.+ ..++.++||||||+++|||++ ||......... .... ....++.....+.++.+++.
T Consensus 187 ~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~ 263 (290)
T cd05045 187 SKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF-NLLK-TGYRMERPENCSEEMYNLML 263 (290)
T ss_pred cCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHh-CCCCCCCCCCCCHHHHHHHH
Confidence 22346778999999877 568999999999999999986 67654443332 2222 22222223455678999999
Q ss_pred HcccCCCCCCCCHHHHHhc
Q 000993 668 RLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~ 686 (1196)
+||+.+|.+||++.++++.
T Consensus 264 ~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 264 TCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHccCCcccCCCHHHHHHH
Confidence 9999999999999999863
No 363
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.4e-32 Score=307.96 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=197.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|.+.+.||+|+||.||+|.+.. ++..|++|++.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 80 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIED---- 80 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 688999999999999999999985 257899998763 33444567789999999999999999999887431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------CCCCHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFRQ 527 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~q 527 (1196)
....+++++|++ ++|.+++... ..+++..++.++.|
T Consensus 81 -----------------------------------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 125 (280)
T cd05043 81 -----------------------------------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125 (280)
T ss_pred -----------------------------------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 234689999997 6999988653 45889999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||+++++||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++.
T Consensus 126 i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------~~~~~~~~~~~y~apE~~~ 192 (280)
T cd05043 126 IACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------CLGDNENRPVKWMALESLV 192 (280)
T ss_pred HHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-------------EeCCCCCcchhccCHHHHh
Confidence 999999999999999999999999999999999999999764322110 0112234677899999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++||+++ ||.......... .+. ....++.....++++.+++.+||..||++|||+.++
T Consensus 193 ~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 193 N-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred c-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 7 568999999999999999986 776554433322 222 222223334456789999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 270 ~~~ 272 (280)
T cd05043 270 VQC 272 (280)
T ss_pred HHH
Confidence 863
No 364
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.9e-32 Score=305.72 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=184.2
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------------- 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE------------- 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------------
Confidence 36899999999999875 3456899998865432 2334578899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.... ..++..+..++.|++.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 67 ---------------------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred ---------------------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 345689999997 69999986432 356778889999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC------CC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------KI 612 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~ 612 (1196)
+++||||||+||+++.++++||+|||+++...... .........+++.|+|||++.+.. .+
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED-------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ 186 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc-------------eeecCCCcCCcccccCHhHhccccccccccCC
Confidence 99999999999999999999999999986432111 011122346788999999986421 35
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhc-CCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQK-GELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~-~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||......+......... ...+ ......+..+.+++.+|+ .+|++|||+++|++
T Consensus 187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 789999999999999985 776555444333222211 1111 112234567889999998 68999999999985
No 365
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.4e-33 Score=310.56 Aligned_cols=235 Identities=20% Similarity=0.335 Sum_probs=183.5
Q ss_pred eeeccCCcEEEEEEEEccCCc-------EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGR-------HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~-------~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.||.|+||.||+|.++.++. .||+|.+... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------- 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------
Confidence 368999999999999875544 4888877532 22345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....++|||||+ |+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 71 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (258)
T cd05078 71 --------------------------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118 (258)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 58999987644 58999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCC--------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 538 QGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+||+||||||+||+++.++. ++++|||++..... .....+++.|+|||++.+.
T Consensus 119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------------------KEILLERIPWVPPECIENP 179 (258)
T ss_pred CCeecCCCccceEEEecccccccCCCceEEecccccccccCC-------------------chhccccCCccCchhccCC
Confidence 99999999999999988765 68999998864321 1234678899999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|||++ ||....... ..........+|. ..+.++.+||.+||+.||.+|||++++++
T Consensus 180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 568999999999999999987 333332222 1222222223332 33468999999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
.
T Consensus 256 ~ 256 (258)
T cd05078 256 D 256 (258)
T ss_pred h
Confidence 4
No 366
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.7e-32 Score=304.11 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=186.5
Q ss_pred eeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||+|.+.. ++..+|+|.+... ........+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----------- 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----------- 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----------
Confidence 368999999999999753 3457999987532 2333456788999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....|++|||+. ++|.+++... ...+...+..++.||+.||+|||+++++
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 69 ----------------------------EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred ----------------------------CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234689999996 6999998764 3467778889999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.+||+|||+++......... ........+++.|+|||.+.+ ..++.++|||||
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl 188 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS-----------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSF 188 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCccee-----------ecccccCcCCccccChhHhcc-CccchHHHHHHH
Confidence 99999999999999999999999997543211000 001123356788999999887 568999999999
Q ss_pred HHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 622 GIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 622 GviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||++|||++ ||........... +. ....++.....++.+.+++.+||..+|++||++.++++.
T Consensus 189 G~~l~el~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 189 GVLLWELMTRGAPPYPDVDSFDITVY-LL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999986 4443333332222 22 222222223446789999999999999999999999874
No 367
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.5e-32 Score=309.74 Aligned_cols=234 Identities=17% Similarity=0.261 Sum_probs=180.8
Q ss_pred eeccCCcEEEEEEEEccC------------------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCee
Q 000993 388 PLGHGGFGHVVLCKNKLD------------------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~------------------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
.||+|+||.||+|.+..+ ...||+|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999986432 235888887532 223456788999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHH
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELA 521 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~ 521 (1196)
++++++.+ ....|+|||||++ +|..++.. .+.+++..+
T Consensus 80 ~~~~~~~~----------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 119 (274)
T cd05076 80 FVHGVCVR----------------------------------------GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119 (274)
T ss_pred eEEEEEEe----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCCCHHHH
Confidence 99998743 3456899999974 78888865 457899999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC-------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
..++.||+.||+|||++||+||||||+|||++..+ .+|++|||++..... ....
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------------------~~~~ 180 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------------------REER 180 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------cccc
Confidence 99999999999999999999999999999997644 389999998764211 1223
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.++..|+|||.+.+...++.++|||||||++|||++ ||......+.. .........|. ...+.+.++|.+||
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~li~~cl 256 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE---PSCKELATLISQCL 256 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC---CCChHHHHHHHHHc
Confidence 577889999998765568999999999999999962 66554333221 11121222222 23457899999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.+|.+|||+.+++++
T Consensus 257 ~~~p~~Rps~~~il~~ 272 (274)
T cd05076 257 TYEPTQRPSFRTILRD 272 (274)
T ss_pred ccChhhCcCHHHHHHh
Confidence 9999999999999975
No 368
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-32 Score=308.01 Aligned_cols=235 Identities=16% Similarity=0.249 Sum_probs=180.0
Q ss_pred eeeccCCcEEEEEEEEccC------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 387 QPLGHGGFGHVVLCKNKLD------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+.||+|+||.||+|++... ...+|+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec---
Confidence 3689999999999986422 2358888875432 2344578889999999999999999988743
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
....+++|||+++ +|..++.. ...+++..++.++.||+.||
T Consensus 76 -------------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 76 -------------------------------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred -------------------------------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 2345899999974 77777764 35699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC-------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND-------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~-------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
+|||+++|+||||||+|||++.++. +|++|||++..... .....++..|+|||.
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~ 179 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------RQECVERIPWIAPEC 179 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------------------cccccccccccChhh
Confidence 9999999999999999999987664 89999999864321 123467889999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
+.....++.++|||||||++|||++ ||......+.. .... ...+ ......+++.+||.+||+.||.+||++.
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCM-LVTPSCKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCcc-CCCCChHHHHHHHHHHcCCChhhCcCHH
Confidence 8754668999999999999999973 55543322211 1111 1111 1122346789999999999999999999
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
+|+++
T Consensus 256 ~il~~ 260 (262)
T cd05077 256 AIMRD 260 (262)
T ss_pred HHHHh
Confidence 99975
No 369
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.6e-32 Score=301.15 Aligned_cols=245 Identities=24% Similarity=0.417 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--------- 70 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 5778999988643322 3568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||+. ++|.+++... ..++++.++.++.|++.||+|||++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 71 -------------------------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred -------------------------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 5898888754 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv 184 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWSSPEVFSF-SKYSSKSDV 184 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCcceeecccCcc--------------cccCCCccchhhcCHhHhcc-CCcChHHHH
Confidence 999999999999999999999999999875422110 01122345678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|||++ ||........... +...... ......+..+.+|+.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 185 WSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFRL-YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCCC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999986 6765444333322 2211111 1112245789999999999999999999999874
No 370
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.7e-32 Score=303.28 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=191.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------- 71 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS---------- 71 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc----------
Confidence 5689999999999999999998744 4699998764332 2456889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 120 (260)
T cd05069 72 -------------------------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120 (260)
T ss_pred -------------------------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123589999997 59999987543 48899999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.|++||||||+||++++++.++|+|||+++....... .......++..|+|||.+.+ ..++.++|
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~D 185 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc--------------cccCCCccchhhCCHHHhcc-CCcChHHH
Confidence 9999999999999999999999999999976432110 01112346778999999877 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||......+.... +... ..++.....+..+.+++++||..||.+||+++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLEQ-VERG-YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999996 7765544443322 2222 222233345678999999999999999999999985
No 371
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-32 Score=312.13 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=192.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
++|.+.++||+|+||.||+|++.. ....+|+|+++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 578899999999999999998642 34579999876432 334456788999999999 69999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CC
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 515 (1196)
...+|++|||++ ++|.+++... ..
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 90 ---------------------------------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 345799999997 5999998653 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~ 197 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------KKTSNGR 197 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc-------------cccccCC
Confidence 788899999999999999999999999999999999999999999999999864321100 0011223
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|||||++.+ ..++.++|||||||++|||++ ||.......... .+. ....+......+.++.+++.+||.
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK-LLR-EGHRMDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4568999999987 568999999999999999986 565443333222 222 222222233456689999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.||.+|||+.++++.
T Consensus 275 ~~p~~Rps~~~ll~~ 289 (314)
T cd05099 275 AVPTQRPTFKQLVEA 289 (314)
T ss_pred CCcccCcCHHHHHHH
Confidence 999999999999863
No 372
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.2e-32 Score=304.42 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+.||+|+||.||+|.+... ...||||...... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 5688999999999999999998644 3468999875332 23455688999999999999999999987621
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 79 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 123 (270)
T cd05056 79 -----------------------------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL 123 (270)
T ss_pred -----------------------------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23589999997 59999997644 589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+||+++.++.+||+|||+++....... ...+...+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (270)
T cd05056 124 ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------YKASKGKLPIKWMAPESINF-RRFTSA 188 (270)
T ss_pred HhCCeeccccChheEEEecCCCeEEccCceeeecccccc--------------eecCCCCccccccChhhhcc-CCCCch
Confidence 999999999999999999999999999999976432210 01122335678999999876 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....++.+...++.+.++|.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999884 787665544443322 222233334566799999999999999999999999864
No 373
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.2e-32 Score=309.40 Aligned_cols=257 Identities=19% Similarity=0.320 Sum_probs=189.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhH---------HHHHHHHHHHHhcCCCCeeeeeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVN---------DRILREVATLSRLQHQHVVRYYQA 448 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~---------~~~~~Ev~iL~~L~HpnIV~l~~~ 448 (1196)
++|.+.+.||+|+||+||+|.+..+ +..+|+|+........... .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999999877 6678888654433221111 112334455667799999999987
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
+.... ....+.|++|+++..++.+.+.....+++..++.++.||
T Consensus 92 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 135 (294)
T PHA02882 92 GSFKR------------------------------------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM 135 (294)
T ss_pred eeEec------------------------------------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence 63210 112356889999988888888776667889999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+......... .........||+.|+|||++.+
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~--------~~~~~~~~~gt~~y~ape~~~~ 207 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEY--------SKEQKDLHRGTLYYAGLDAHNG 207 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCccccc--------ccccccccCCCccccCHHHhCC
Confidence 99999999999999999999999999999999999999865322110000 0011233479999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHH-HHHH-------HHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAME-RQIV-------LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~-~~~~-------~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||+||||++ ||..... .... ...+. .... .....+..+.++++.|+..+|.+|
T Consensus 208 -~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 208 -ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH-EGKI--KIKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred -CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh-hhhh--ccCCCCHHHHHHHHHHHhCCCCCC
Confidence 568999999999999999996 8865522 1111 11111 1111 122345689999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
|++.++++
T Consensus 284 p~~~~l~~ 291 (294)
T PHA02882 284 PDYDALIK 291 (294)
T ss_pred CCHHHHHH
Confidence 99999986
No 374
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.6e-32 Score=304.74 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=182.4
Q ss_pred eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||+||+|.... ....+|+|.+... ........+.+|+.+++.++||||+++++.+.+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-------------- 66 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-------------- 66 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--------------
Confidence 68999999999997542 3457888876532 233345678899999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||++ ++|.+++.... .+++..++.++.||+.||+|||++|
T Consensus 67 --------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 67 --------------------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred --------------------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 345799999997 59999986543 2467888999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC------CCCCC
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WPKID 613 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~~s 613 (1196)
|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.. ...++
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQT 187 (269)
T ss_pred EecccccHhheEecCCCcEEEeccccccccccchh-------------eeccCCCCCcccccCHHHHhhccccccccccc
Confidence 99999999999999999999999999864321110 001123356778999998753 13468
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcC-CCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKG-ELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~-~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||....+.+.......... ..+ ......++...+++..|| .||.+|||+++|++.
T Consensus 188 ~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 188 KKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred hhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 89999999999999986 6665544444333333221 111 122245567788999998 599999999999863
No 375
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.8e-32 Score=300.66 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|.+. +++.||||.+..... ...++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSE-------- 72 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeec--------
Confidence 478999999999999999999986 567899999874333 24578899999999999999999987621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++.... .++...+..++.||+.||+|||
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 73 --------------------------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred --------------------------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999997 59999987643 6899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~ 185 (261)
T cd05034 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------AREGAKFPIKWTAPEAANY-GRFTIKS 185 (261)
T ss_pred hCCcccCCcchheEEEcCCCCEEECccccceeccchhhh--------------hhhccCCCccccCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998765321100 0112234678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|+|++ ||.............. .. .++.....+.++.+++.+||+.+|.+||+++++++
T Consensus 186 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GY-RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999999999996 6655444333333222 21 12222334678999999999999999999999975
No 376
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.3e-32 Score=311.33 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|+..+.||+|+||.||+|.+..+|. .+|+|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 3688899999999999999999987776 46888775332 22334568899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++||++ |+|.+++.... .+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 123 (303)
T cd05110 81 -------------------------------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM 123 (303)
T ss_pred -------------------------------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 12468999997 68999887644 6899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+||+++.++.+||+|||+++....... ........++..|+|||.+.+ ..++
T Consensus 124 ~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (303)
T cd05110 124 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------------EYNADGGKMPIKWMALECIHY-RKFT 189 (303)
T ss_pred HHhhcCeeccccccceeeecCCCceEEccccccccccCccc-------------ccccCCCccccccCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 011223456788999999887 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||........ ...+. ....++.....+..+.+++.+||..+|++||++.++++.
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLE-KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999975 6655433222 22222 333333334456789999999999999999999999874
No 377
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.5e-32 Score=299.81 Aligned_cols=245 Identities=25% Similarity=0.341 Sum_probs=195.4
Q ss_pred ceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.+.+.||.|+||.||+|.+..++ ..||+|++.... .......+.+|+..++.++||||+++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE------- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------
Confidence 356788999999999999998766 899999986432 22256688999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++|||++ ++|.+++..... +++..++.++.||+.||+||
T Consensus 73 ---------------------------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 73 ---------------------------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred ---------------------------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 246799999997 599999876544 99999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.+++||||||+||+++.++.++|+|||+++........ ......+++.|+|||.+.+ ..++.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~ 184 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--------------KKKGGKLPIRWMAPESLKD-GKFTSK 184 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--------------ccccCCCcccccChHHhcc-CCCCcc
Confidence 9999999999999999999999999999999765322100 0112237889999999866 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+||||||+++|+|++ ||............. ....++.....+.++.+++.+||+.||.+|||+.++++
T Consensus 185 ~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 185 SDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK--KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999985 565443333332222 22233333446778999999999999999999999986
No 378
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.2e-32 Score=299.02 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=189.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
+.||.|+||.||+|... ++..||+|.++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 63 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED-LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--------------- 63 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec---------------
Confidence 36899999999999865 7889999987643 233344578899999999999999999987732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....++||||++ ++|.+++... ..+++..++.++.|++.||.|||++|++|||
T Consensus 64 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d 118 (250)
T cd05085 64 -------------------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118 (250)
T ss_pred -------------------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 235699999996 5899888653 4689999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||++........ .......+++.|+|||++.+ ..++.++||||||++
T Consensus 119 l~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l 183 (250)
T cd05085 119 LAARNCLVGENNVLKISDFGMSRQEDDGIY--------------SSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL 183 (250)
T ss_pred cChheEEEcCCCeEEECCCccceecccccc--------------ccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence 999999999999999999999875321110 00112244678999999987 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|+|++ ||............ . ...........++.+.+++.+||+.+|.+||++.++++.
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQV-E-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999986 77655443332222 2 222222333456789999999999999999999999864
No 379
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.7e-32 Score=304.42 Aligned_cols=239 Identities=24% Similarity=0.365 Sum_probs=185.3
Q ss_pred eeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 388 PLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
.||+|+||.||+|+++.++. .+|+|.++. .........+.+|+.+++.+ +||||+++++++..
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------------- 67 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------------- 67 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------------
Confidence 58999999999999988776 467887652 22334456788999999999 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHHHHHHHHHH
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKELAWHLFRQ 527 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~~~~i~~q 527 (1196)
...+|++|||++ ++|.+++.... .++++.++.++.|
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 68 ---------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred ---------------------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 234699999997 69999986532 4788999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
++.||+|||++|++||||||+|||++.++.+||+|||++...... ........++.|+|||++.
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~----------------~~~~~~~~~~~y~apE~~~ 184 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------hhccCCCCccccCChHHHc
Confidence 999999999999999999999999999999999999998532100 0011123467899999987
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++|||++ ||........... .. ....++.....+.++.+|+.+||..||.+|||+.++
T Consensus 185 ~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 185 Y-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred c-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH-Hh-CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 6 568999999999999999985 7755443332222 22 111222223456789999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 262 l~~ 264 (270)
T cd05047 262 LVS 264 (270)
T ss_pred HHH
Confidence 864
No 380
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=324.28 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=205.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC-Cc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLD-GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
-.++..+.++||+|.||.|++|.|... |+ .||||+++..... ....+|++|+.+|.+|+|||++++||+.+.
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~---- 182 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD---- 182 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc----
Confidence 345667778999999999999999743 33 5899998754333 267899999999999999999999998742
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL 532 (1196)
..+.+|||+|+ |+|.+.|+. ...|.......|+.|||.||
T Consensus 183 -------------------------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM 225 (1039)
T KOG0199|consen 183 -------------------------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAM 225 (1039)
T ss_pred -------------------------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHH
Confidence 23468999997 799999987 34588889999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
.||.++++|||||..+|+|+-....|||+|||+.+.+..+.. .........-...|+|||.+.. ..+
T Consensus 226 ~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned------------~Yvm~p~rkvPfAWCaPEsLrh-~kF 292 (1039)
T KOG0199|consen 226 QYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED------------MYVMAPQRKVPFAWCAPESLRH-RKF 292 (1039)
T ss_pred HHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc------------ceEecCCCcCcccccCHhHhcc-ccc
Confidence 999999999999999999999999999999999998764431 1111223345678999999998 689
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||+|||+||||++ ||.+....++...+- .+...+....++.++.++++.||..+|.+|||+..|...
T Consensus 293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 293 SHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 999999999999999997 888777766655443 444445555677899999999999999999999998643
No 381
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-33 Score=316.47 Aligned_cols=243 Identities=23% Similarity=0.368 Sum_probs=202.1
Q ss_pred eEEeeeccCCcEEEEEEEEccC--Cc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLD--GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~--g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.+.||.|.||.||+|....- |+ .||||.-+ .++.....+.|+.|..+|+.++|||||+++|+|.+
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK-~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-------- 462 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK-TDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-------- 462 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhc-cCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--------
Confidence 3446799999999999987522 33 58888765 44666678899999999999999999999999854
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...|||||+++ |.|..+|+.+ ..++......|+.||+.||+|||+
T Consensus 463 ---------------------------------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS 509 (974)
T KOG4257|consen 463 ---------------------------------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES 509 (974)
T ss_pred ---------------------------------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh
Confidence 34699999998 7999999865 468888999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
..+|||||..+|||+.+..-+||+|||+++.+....... .+...-..-|||||.+.- ..++.++|
T Consensus 510 krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk--------------aS~~kLPIKWmaPESINf-RrFTtASD 574 (974)
T KOG4257|consen 510 KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK--------------ASRGKLPIKWMAPESINF-RRFTTASD 574 (974)
T ss_pred hchhhhhhhhhheeecCcceeeecccchhhhccccchhh--------------ccccccceeecCccccch-hcccchhh
Confidence 999999999999999999999999999999876443221 122334567999999876 67999999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||.|||.+||++. ||.+..+...... .+++..+|-++.++|.+..|+.+||+.+|.+||.+.+|..
T Consensus 575 VWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 575 VWMFGVCMWEILSLGVKPFQGVKNSDVIGH--IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHHHHHHHHHhcCCccccccccceEEE--ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 9999999999985 9987766554332 2367777778889999999999999999999999999864
No 382
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.2e-32 Score=313.54 Aligned_cols=249 Identities=23% Similarity=0.334 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
.+|.+.+.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 4688999999999999999987532 236899987632 2333456789999999999 89999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------C
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 515 (1196)
...+|++|||++ ++|.+++.+.. .
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 130 (334)
T cd05100 90 ---------------------------------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130 (334)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999986532 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~ 197 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-------------YKKTTNGR 197 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------cccccCCC
Confidence 67788899999999999999999999999999999999999999999999975432110 00112234
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
++..|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....++.....+.++.+++.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK-LLK-EGHRMDKPANCTHELYMIMRECWH 274 (334)
T ss_pred cCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 665544333322 222 222223334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+||++.+++++
T Consensus 275 ~~p~~Rps~~ell~~ 289 (334)
T cd05100 275 AVPSQRPTFKQLVED 289 (334)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999975
No 383
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.2e-32 Score=302.47 Aligned_cols=233 Identities=19% Similarity=0.297 Sum_probs=183.0
Q ss_pred eeeccCCcEEEEEEEEccCC----------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 387 QPLGHGGFGHVVLCKNKLDG----------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g----------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 36899999999999998766 3578887653322 15678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++||||++ ++|.+++.... .++...+..++.||+.||+|
T Consensus 73 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 73 ------------------------------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred ------------------------------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 23489999997 58999988765 79999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC-------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||++||+||||||+|||++.++ .+||+|||++..... .....++..|+|||++.
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~~~~y~aPE~~~ 177 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------REERVERIPWIAPECIR 177 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-------------------ccccccCCCccChhhhc
Confidence 9999999999999999999887 799999999975421 11235677899999998
Q ss_pred CC-CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 608 GW-PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 608 ~~-~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+. ..++.++|||||||++|||++ ||.......... ........+.. ....+.++|.+||..+|.+|||+.+
T Consensus 178 ~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 178 NGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQDQHRLPMP---DCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHhcCCCCCCC---CchHHHHHHHHHhccChhhCCCHHH
Confidence 74 368999999999999999985 454443222111 11112222211 1268899999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
+++.
T Consensus 254 il~~ 257 (259)
T cd05037 254 ILRD 257 (259)
T ss_pred HHHh
Confidence 9864
No 384
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.2e-32 Score=303.32 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=195.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|.+.+.||+|+||.||+|.++.+|. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 678999999999999999999887665 58999876432 33455678899999999999999999988731
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 81 ------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 124 (279)
T cd05057 81 ------------------------------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSY 124 (279)
T ss_pred ------------------------------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 34689999996 5999988764 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++....... ........++..|+|||.+.. ..++.
T Consensus 125 LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (279)
T cd05057 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 190 (279)
T ss_pred HHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-------------ceecCCCcccccccCHHHhhc-CCcCc
Confidence 9999999999999999999999999999999986532110 001112234678999999876 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|+|||||++||+++ ||......+... .+. .....+.....+..+.+++.+||..||.+||++.++++
T Consensus 191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-LLE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-HHh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999986 666554443332 222 22222223345568899999999999999999999975
No 385
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-33 Score=314.97 Aligned_cols=245 Identities=23% Similarity=0.315 Sum_probs=202.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.....+||-|.||.||.|.|+...-.||||.++- +....++|+.|..+|+.++|||+|+++|+|..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~---------- 334 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---------- 334 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhcc----------
Confidence 45567799999999999999999999999998862 33456789999999999999999999999832
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
..-+|||.|||. |.|.++|++.++ ++.-..+.++.||.+||+||..+
T Consensus 335 ------------------------------EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 335 ------------------------------EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred ------------------------------CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 456799999985 899999987654 66667788899999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||..+|+|+.++..||++|||++++...+.+. .+-+..-..-|.|||-|.. ..++.|+||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--------------AHAGAKFPIKWTAPEsLAy-NtFSiKSDV 449 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NTFSIKSDV 449 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--------------cccCccCcccccCcccccc-cccccchhh
Confidence 9999999999999999999999999999987543321 1222334567999999886 679999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+|||+|||+.| ||.+.+..+++ .+..++..-.....+++....||+.||+.+|.+||++.+|-+.
T Consensus 450 WAFGVLLWEIATYGMsPYPGidlSqVY--~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 450 WAFGVLLWEIATYGMSPYPGIDLSQVY--GLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred HHHHHHHHHHHhcCCCCCCCccHHHHH--HHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 999999999986 77665544332 2334555555666788899999999999999999999998653
No 386
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.3e-32 Score=305.56 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=202.2
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||+|+||.||+|++. .++..||||+++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 4788999999999999999864 4678999999874322 122345688999999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+||||++ ++|.+++.....+++..++.++.|++.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~ 120 (288)
T cd05583 76 -----------------------------------TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120 (288)
T ss_pred -----------------------------------cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 2356799999997 5999998877889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~s 613 (1196)
||+.+++||||||+||+++.++.++|+|||+++...... ........|++.|+|||.+.+.. ..+
T Consensus 121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (288)
T cd05583 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--------------EERAYSFCGTIEYMAPEVIRGGSGGHD 186 (288)
T ss_pred HHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--------------ccccccccCCccccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999987643221 01112346889999999987632 368
Q ss_pred CcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATEL 683 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~ei 683 (1196)
.++|+||||+++|||++ ||.... ........... .++......+.+.++|.+||+.||++||| +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS---KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc---CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 89999999999999997 664221 11222222221 12223335578999999999999999998 5677
Q ss_pred HhccCCCCchHHHH
Q 000993 684 LQDALPPQMEYELL 697 (1196)
Q Consensus 684 L~~~~~~~~~~~~~ 697 (1196)
|+|+|+....++.+
T Consensus 264 l~~~~~~~~~~~~~ 277 (288)
T cd05583 264 KNHPFFQGIDWDDL 277 (288)
T ss_pred hcCcccccCCHHHH
Confidence 99999999887644
No 387
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=5e-32 Score=301.82 Aligned_cols=249 Identities=29% Similarity=0.444 Sum_probs=195.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|.+.+.||+|+||.||++++..++..+++|+++.. ........++.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE------- 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------
Confidence 478889999999999999999887777777766532 2222334567789999999999999999877632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+++|||+++ +|.+++.. ...+++..++.++.|++.||.
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 74 ---------------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred ---------------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 3457999999974 88887753 356999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++|+||||+||+++. +.+||+|||+++....... ......|++.|+|||.+.+ ..++
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~ 183 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---------------LATTFTGTPYYMSPEALKH-QGYD 183 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcc---------------cccCCCCCcCccCHHHHcc-CCCC
Confidence 999999999999999999975 6799999999876432110 1123457889999999876 5678
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++|+||||+++|+|++ ||............. ....+......+.++.++|.+||..||.+||++.++++|+|+
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 89999999999999996 675544433333322 223333333456789999999999999999999999999996
No 388
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=6.2e-32 Score=304.34 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=195.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|.+.+.||+|+||.||+|++.. ++..||||+++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 467888999999999999999753 4889999998754433 3567899999999999999999999876321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+.+++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~ 124 (284)
T cd05038 79 ----------------------------------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124 (284)
T ss_pred ----------------------------------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHH
Confidence 1346799999996 59999987654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.++|+|||++......... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~ 191 (284)
T cd05038 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------YYVKEPGESPIFWYAPECLRT-SKFSS 191 (284)
T ss_pred HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc------------eeccCCCCCcccccCcHHHcc-CCCCc
Confidence 99999999999999999999999999999999865321100 001112345667999999877 46889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH--------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ--------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~--------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
++||||||+++|||++ ||....... .....+. .....+.....+.++.+++.+||+.+|.+|
T Consensus 192 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 192 ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred ccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 9999999999999997 554322111 1111111 222222233445689999999999999999
Q ss_pred CCHHHHHhc
Q 000993 678 PSATELLQD 686 (1196)
Q Consensus 678 Pta~eiL~~ 686 (1196)
||+.++++.
T Consensus 271 pt~~ei~~~ 279 (284)
T cd05038 271 PSFADLILI 279 (284)
T ss_pred CCHHHHHHH
Confidence 999999863
No 389
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-31 Score=301.31 Aligned_cols=244 Identities=21% Similarity=0.362 Sum_probs=182.8
Q ss_pred eeccCCcEEEEEEEEccCC--cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDG--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||.||+|....++ ..+++|.+... ........+.+|+.+++.++||||+++++.|..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------------- 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------------- 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecC--------------
Confidence 5899999999999865332 34667766532 223445789999999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+|||||+ ++|.+++.+. ..++...++.++.||+.||+|||++++
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 67 --------------------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred --------------------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 345799999997 5999998753 246677788999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC------CCCCC
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW------PKIDE 614 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~~s~ 614 (1196)
+||||||+|||++.++.+||+|||++....... .........+++.|+|||++... ..++.
T Consensus 121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (268)
T cd05086 121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED-------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTK 187 (268)
T ss_pred eccCCccceEEEcCCccEEecccccccccCcch-------------hhhcccCCcCcccccCchhcccccCccccCCCCC
Confidence 999999999999999999999999986421110 00112345788999999987531 23578
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCC---CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGE---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~---~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||....+.+.....+..... .|.......+.+.+++..|| .+|.+||++.++++.
T Consensus 188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 9999999999999984 77655554444433332211 12222335567889999999 679999999999863
No 390
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1e-31 Score=297.41 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=189.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------------- 63 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--------------- 63 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec---------------
Confidence 368999999999999986 999999988754332 345678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....|++|||++ ++|.+++.. ...++...+..++.|++.||+|||+++++|||
T Consensus 64 -------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 64 -------------------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred -------------------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 345799999996 589998865 34688999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|+|||||+
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 184 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSREEEGGIY-------------TVSDGLKQIPIKWTAPEALNY-GRYTSESDVWSYGIL 184 (251)
T ss_pred cCcceEEEcCCCcEEEeeccccccccCCcc-------------eeccccCcceeccCChHhhcc-CCCCcchhHHHHHHH
Confidence 999999999999999999999975431110 001112234677999999887 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||++ ||........... +. ....++.....+..+.+++.+||..+|.+|||+.++++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRER-IE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 999996 5654443322222 22 111222233456789999999999999999999999864
No 391
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6e-32 Score=298.59 Aligned_cols=242 Identities=32% Similarity=0.473 Sum_probs=197.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||++.+..+++.||+|+++..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----------------
Confidence 69999999999999988999999998754322 224567889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+.+++|+|||
T Consensus 64 -----------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 64 -----------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred -----------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 245789999999 56999999888789999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ...+.++|+||||+++|
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~ 184 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEG---------------SRTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLY 184 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCC---------------CcccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHH
Confidence 999999999999999999997643211 01233468889999999887 45789999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHhccCC
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALP 689 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~~~~~ 689 (1196)
+|++ ||...................| ...+..+.++|++||..||.+||++ +++++|+||
T Consensus 185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 185 EMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9996 7765554333333332122222 2335689999999999999999999 999999997
No 392
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=314.02 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=199.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.+.+.++||+|-||+|.+|.-. .+..||||+++.... ......|.+|+++|.+|+|||||+++|+|+.
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~---------- 606 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQ---------- 606 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeec----------
Confidence 4567789999999999999876 468999999875433 2345789999999999999999999999954
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.+.++++||||. |+|.+++.... ........+++.||++||+||.+.
T Consensus 607 ------------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 607 ------------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred ------------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 345789999996 89999998763 345666778999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||.+.|||++.++++||+|||+++.+...... .-....+-..+|||||.+.. ++++.++|+
T Consensus 657 nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy-------------~vqgr~vlpiRwmawEsill-gkFttaSDv 722 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY-------------RVQGRAVLPIRWMAWESILL-GKFTTASDV 722 (807)
T ss_pred chhhccccccceeecCcccEEecCcccccccccCCce-------------eeecceeeeeeehhHHHHHh-ccccchhhh
Confidence 9999999999999999999999999999965432211 11123456789999998776 579999999
Q ss_pred HHHHHHHHHhhc-----CCchhHHHHHHHHHhhh--c-C--CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH-----PFSTAMERQIVLSDLKQ--K-G--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt-----Pf~~~~~~~~~~~~l~~--~-~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+||++|||+++ ||....++++....-.. . + ..++.+.-++..+.++|-+||..|-.+||+++++..+
T Consensus 723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 999999999984 99888877765432211 1 1 1223333455688999999999999999999999654
No 393
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.98 E-value=2.6e-31 Score=296.53 Aligned_cols=244 Identities=25% Similarity=0.345 Sum_probs=193.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------
Confidence 478999999999999999999865 5667999987632 2234678899999999999999999877621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 73 ---------------------------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred ---------------------------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999998753 35788899999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.|++||||||+||+++.++.+||+|||.+..+..... .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~ 184 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 184 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--------------ccccCCcccccccCHhHhcc-CCcCccc
Confidence 99999999999999999999999999999975432110 01122345678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|+|||||++|+|++ ||........... +. .....+.....+.++.+++.+||+.+|.+||++.++++
T Consensus 185 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-Hh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999996 7765444333222 22 22222333455678999999999999999999999875
No 394
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=296.74 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=202.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++++-+..||.|+||+|++..|+.+|+..|||.|+.... .....+++.|.....+- +.||||++||+++..|
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG------ 136 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG------ 136 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC------
Confidence 345556789999999999999999999999999986554 34567888888766554 7999999999985432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..||.||+|+-||..+.. +...++|+..-.+...++.||.|
T Consensus 137 ----------------------------------dcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 137 ----------------------------------DCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred ----------------------------------ceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 359999999987765543 34579999999999999999999
Q ss_pred HHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-C
Q 000993 535 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 612 (1196)
Q Consensus 535 LHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~ 612 (1196)
|-.. .|||||+||+|||++..|.+||||||++-.+..+ +..+.-.|...|||||.+..... |
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------iAkT~daGCrpYmAPERi~p~~~gy 246 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------IAKTVDAGCRPYMAPERIDPSDKGY 246 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------HHhhhccCCccccChhccCCccCCc
Confidence 9875 7999999999999999999999999999876422 22344578899999999876544 9
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-----ccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-----SWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-----~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+.++|+|||||+|||+.| |+..++..-..+..+. .+..|. ...+.+..+..+|..||.+|-++||...+++
T Consensus 247 DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 247 DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 999999999999999998 7777766433333333 222221 2234567899999999999999999999999
Q ss_pred hccCCCC
Q 000993 685 QDALPPQ 691 (1196)
Q Consensus 685 ~~~~~~~ 691 (1196)
+++|..-
T Consensus 326 ~~~fyr~ 332 (361)
T KOG1006|consen 326 KFPFYRM 332 (361)
T ss_pred cCchhhh
Confidence 9986654
No 395
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.98 E-value=1e-31 Score=298.47 Aligned_cols=239 Identities=24% Similarity=0.377 Sum_probs=190.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 70 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH-------- 70 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------
Confidence 36799999999999999999864 68899999886421 24578899999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 71 ---------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 71 ---------------------------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred ---------------------------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12589999997 59999987543 5889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++..... ......+..|+|||.+.+ ..++.++
T Consensus 118 ~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~~~~y~~pe~~~~-~~~~~~~ 178 (254)
T cd05083 118 SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------------------VDNSKLPVKWTAPEALKH-KKFSSKS 178 (254)
T ss_pred hCCeeccccCcceEEEcCCCcEEECCCccceecccc------------------CCCCCCCceecCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998743211 011234567999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+|||||++|||++ ||......+.... .. ....++.....+..+.+++.+||+.+|.+||++.+++..
T Consensus 179 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 179 DVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC-VE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred hHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-Hh-CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999984 6765544333222 22 222222233456789999999999999999999999863
No 396
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=321.47 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=209.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.....+.++||.|.||+|++|+.+..|+ .||||.++.. .+.....+|+.|..+|-+++||||+++.|+..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT------ 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT------ 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe------
Confidence 4566788999999999999999997764 6999999754 34455678999999999999999999998862
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...-+.||.|||. |+|..+|+.+ +.|+.-+...+++.|+.||.|
T Consensus 701 ----------------------------------ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkY 746 (996)
T KOG0196|consen 701 ----------------------------------KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKY 746 (996)
T ss_pred ----------------------------------cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHH
Confidence 2455789999995 7999999865 569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|-++|+|||||..+|||++.+..+|++|||+++.+..+. ... ....+..-..+|.|||++.. .+++.
T Consensus 747 Lsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~---~~~---------ytt~GGKIPiRWTAPEAIa~-RKFTs 813 (996)
T KOG0196|consen 747 LSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EAA---------YTTLGGKIPIRWTAPEAIAY-RKFTS 813 (996)
T ss_pred HhhcCchhhhhhhhheeeccceEEEeccccceeecccCC---Ccc---------ccccCCccceeecChhHhhh-cccCc
Confidence 999999999999999999999999999999999774332 111 11223344679999999987 68999
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||+|||.++ ||.+..+.+.. +.+.+..++|+ +..++..+..|+..||++|-.+||.+.+|+..
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVI-kaIe~gyRLPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEQGYRLPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHH-HHHHhccCCCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999996 88887776554 44554555554 45678899999999999999999999999964
No 397
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.98 E-value=1.9e-31 Score=299.20 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=193.2
Q ss_pred ceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|.+.+.||+|+||.||+|.++. +++.||||++..........+++.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 5677899999999999998753 57899999997655455556778999999999999999999987743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc------CCCCHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL 532 (1196)
.......+++++|+. ++|.+++... ..++...++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 76 -----------------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred -----------------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 001234578899996 6888776422 2478899999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+||+++.++.+||+|||+++....... ........+++.|++||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY-------------YRQGCASKLPVKWLALESLAD-NVY 192 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-------------eecCCCccCchhhcCHhHHhc-Ccc
Confidence 999999999999999999999999999999999986432110 011122345678999999887 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|.+||++.+++++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK--GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999999999985 5654443333222221 22222223456789999999999999999999999875
No 398
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=305.08 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=199.2
Q ss_pred CCCCCCCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc--CCCCeee
Q 000993 367 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVR 444 (1196)
Q Consensus 367 ~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L--~HpnIV~ 444 (1196)
+++..+.+.+.....+..+++.||+|.||+||+|+|+ |+.||||++...+ ...+.||.++.... +|+||+.
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILg 269 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILG 269 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhh
Confidence 3444445555556678899999999999999999998 9999999996433 35577888877764 9999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 523 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 523 (1196)
++++= +++.| .-..+|+|++|.+ |||+|+|.+ ..++.+...+
T Consensus 270 FIaaD------------~~~~g------------------------s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~ 312 (513)
T KOG2052|consen 270 FIAAD------------NKDNG------------------------SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLK 312 (513)
T ss_pred hhhcc------------ccCCC------------------------ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHH
Confidence 88552 22222 2468999999997 899999988 6799999999
Q ss_pred HHHHHHHHHHHHHhC--------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 524 LFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~--------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++..+|+||+|||-. .|.|||||+.|||+..++.+.|+|+|+|-..... +.......+.++
T Consensus 313 LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~-----------t~~idi~~N~rV 381 (513)
T KOG2052|consen 313 LALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD-----------TDTIDIPPNPRV 381 (513)
T ss_pred HHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc-----------CCcccCCCCCcc
Confidence 999999999999953 4999999999999999999999999999765322 122334456789
Q ss_pred ccccCCCchhccCCCC-----CCCcchhHHHHHHHHHhhc-------------CCchhHHH----HHHHH---HhhhcCC
Q 000993 596 GTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAMER----QIVLS---DLKQKGE 650 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~-----~s~ksDVwSlGviLyELlt-------------Pf~~~~~~----~~~~~---~l~~~~~ 650 (1196)
||.+|||||+|...-+ --..+||||||.++||++. ||.+..+. +...+ ..+..+.
T Consensus 382 GTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ 461 (513)
T KOG2052|consen 382 GTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPN 461 (513)
T ss_pred ceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCC
Confidence 9999999999875211 1146999999999999961 77644321 11111 1222333
Q ss_pred CCCccccCC--HHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 651 LPPSWVAKF--SEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 651 ~p~~~~~~~--~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|..|.... ..+.++|+.||..||.-|.|+-.|-+
T Consensus 462 ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 462 IPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 444454422 25678999999999999999877754
No 399
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.98 E-value=1.2e-31 Score=299.92 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=187.6
Q ss_pred eeccCCcEEEEEEEEccCC------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDG------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.||+|+||.||+|+++... +.+|||.+... ........+.+|+.+++.++||||++++++|..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL---------- 70 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----------
Confidence 5899999999999986443 68999987643 222345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|++|||++ ++|.+++... ..+++..+..++.||+.||+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 71 ------------------------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred ------------------------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 235799999997 5999988642 33788999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCC-----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|||+.+++|+||||+||+++.++ .++|+|||+++........ .......++..|+|||++.+
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~ 187 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-------------RKEGEGLLPVRWMAPESLLD 187 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccc-------------ccCcccCCCccccCHHHHcc
Confidence 99999999999999999999877 8999999999765322110 01122356788999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++.++|||||||++|||++ ||......+..... . ....+......++.+.++|.+||..+|.+||++.+++
T Consensus 188 -~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 188 -GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-T-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred -CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-h-cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 568999999999999999985 66544443332222 1 1222223344567889999999999999999999997
Q ss_pred hc
Q 000993 685 QD 686 (1196)
Q Consensus 685 ~~ 686 (1196)
+.
T Consensus 265 ~~ 266 (269)
T cd05044 265 EI 266 (269)
T ss_pred HH
Confidence 63
No 400
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=2.7e-31 Score=297.49 Aligned_cols=247 Identities=30% Similarity=0.511 Sum_probs=194.0
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCC--------CCchhHHHHHHHHHHHHh-cCCCCeeeeeeeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKD--------KSLPVNDRILREVATLSR-LQHQHVVRYYQAWFE 451 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~--------~~~~~~~~~~~Ev~iL~~-L~HpnIV~l~~~~~e 451 (1196)
+|++.+.||+|+||.||+|.++. +++.+|+|.+.... .......++.+|+.+++. ++||||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 68899999886432 122234567789888875 799999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFR 526 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~ 526 (1196)
....|++|||+++ +|.+++.. ...+++..++.++.
T Consensus 81 ----------------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 120 (269)
T cd08528 81 ----------------------------------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120 (269)
T ss_pred ----------------------------------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 3567999999975 88887743 34689999999999
Q ss_pred HHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 527 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 527 qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|++.||.|||+ .+++|+||||+||+++.++.+||+|||++....... ......|+..|+|||.
T Consensus 121 ~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred HHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------ccccccCcccCcChhh
Confidence 99999999996 689999999999999999999999999997643211 1234568899999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+.+ ..++.++|+||||+++|+|++ ||.............. ....|......++.+.++|.+||+.||++||++.+
T Consensus 185 ~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 185 VKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred hcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh-ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 987 568999999999999999996 7765444333222221 22222222245678999999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 9764
No 401
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=319.69 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=212.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+-|++.++||.|.+|+||+++++.+++..|||++.... ...+++..|..+|+.. .|||++.+|++|.-..
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~------ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD------ 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEec------
Confidence 57899999999999999999999999999999986432 3445677788899888 7999999999985432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|+|||||+ ||.-|++.. ..++.|+.+..|++.++.|+.|||
T Consensus 90 -----------------------------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 90 -----------------------------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred -----------------------------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence 124678999999997 588888764 457999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 612 (1196)
.+.++|||||-.|||++.++.|||+|||++..+... ...+.+.+|||.|||||++... ..|
T Consensus 141 ~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------~grRnT~iGtP~WMAPEViac~e~~d~ty 205 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------VGRRNTFIGTPYWMAPEVIACDESPDATY 205 (953)
T ss_pred hcceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------cccccCcCCCcccccceeeecccCCCCCc
Confidence 999999999999999999999999999999875321 1234667999999999998653 347
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+..+|+|||||+..||.- |+.+.+++-..+.+.+..+.....+...+.++.++|..||.+|-.+||+..++|+|||.
T Consensus 206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 889999999999999984 78887777666554432211111233455688999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
....
T Consensus 286 ~e~~ 289 (953)
T KOG0587|consen 286 TEQP 289 (953)
T ss_pred cccc
Confidence 7543
No 402
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2e-31 Score=293.86 Aligned_cols=228 Identities=21% Similarity=0.300 Sum_probs=178.4
Q ss_pred CCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCccccc
Q 000993 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471 (1196)
Q Consensus 392 G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~ 471 (1196)
|.||.||+|+++.+|+.||+|+++... .+.+|...+....||||+++++++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIV--------------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhhee---------------------
Confidence 899999999999999999999986432 2334555556668999999997763
Q ss_pred ccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcE
Q 000993 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550 (1196)
Q Consensus 472 ~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NI 550 (1196)
.....|++|||++ ++|.+++.+...+++..+..++.|++.||+|||++||+||||||+||
T Consensus 56 -------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 56 -------------------SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred -------------------cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 2356899999997 59999998877899999999999999999999999999999999999
Q ss_pred EecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc
Q 000993 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH 630 (1196)
Q Consensus 551 Lld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt 630 (1196)
+++.++.++++|||.+...... .....++..|+|||++.+ ..++.++|+||+||++|||++
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDS------------------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLT 177 (237)
T ss_pred EEcCCCCEEEecccchhccccc------------------cccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999988654211 122356778999999876 568899999999999999997
Q ss_pred CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCC
Q 000993 631 PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALP 689 (1196)
Q Consensus 631 Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~ 689 (1196)
.............. .....+| ...++.++++|++||+.||.+||++ +++++||||
T Consensus 178 g~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 178 GKTLVECHPSGINT-HTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcchhhcCchhccc-ccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 32211100000000 0011122 2345689999999999999999985 999999996
No 403
>PLN02908 threonyl-tRNA synthetase
Probab=99.97 E-value=3.4e-31 Score=331.52 Aligned_cols=354 Identities=14% Similarity=0.120 Sum_probs=259.8
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.+.|+++|+|.++.+++.|.+.+++.+.++||++|.||.+ ++ +++.+.+.++||.| |.+++.++|||+.|+
T Consensus 307 ~~~~~G~~~~lP~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~ 385 (686)
T PLN02908 307 HELSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCP 385 (686)
T ss_pred cCCCCcceEEechHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcH
Confidence 345689999999999999999999999999999999999999 22 34456688999998 778899999999999
Q ss_pred HHHHHHHhCC----CCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCC-CccchH-HHHHHHHHHHHHcCCCC
Q 000993 812 PFIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGA-SALTEA-EVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 812 ~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~-~~~aDa-EvI~la~~~L~~lgi~~ 880 (1196)
+++++++.+. ..|+|+|++|++||+|.+. .|.|+|+|+++++||.. ...+|+ |++.++.++++.||+.
T Consensus 386 ~~~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~- 464 (686)
T PLN02908 386 GHCLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFT- 464 (686)
T ss_pred HHHHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 9999988632 4699999999999998873 25567999999999995 457888 9999999999999994
Q ss_pred ceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Q 000993 881 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 960 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 960 (1196)
+.+.|+++. +.++..++..+.....+..+|++.++. +.. .. .-.++ .|
T Consensus 465 -~~~~ls~r~--~~~~g~~~~w~~ae~~l~~~ld~~~~~------~~~------------~~-------g~~af----yg 512 (686)
T PLN02908 465 -YELKLSTRP--EKYLGDLETWDKAEAALTEALNAFGKP------WQL------------NE-------GDGAF----YG 512 (686)
T ss_pred -EEEEEeCCc--cccCCCHHHHHHHHHHHHHHHHHcCCC------cEE------------CC-------Cceee----cc
Confidence 999999985 555443333333334456666654421 000 00 00011 12
Q ss_pred ChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCC--CCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 961 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
+.. +..+..++.++ ..+ ..+.+|+.+.. +++||| |....
T Consensus 513 pki------------d~~~~d~l~r~----~~~-~t~q~df~lp~~f~L~Y~~----e~~~~------------------ 553 (686)
T PLN02908 513 PKI------------DITVSDALKRK----FQC-ATVQLDFQLPIRFKLSYSA----EDEAK------------------ 553 (686)
T ss_pred cce------------EEEEEeccCCE----eec-cceeecccCHhhcCCEEEC----CCCCc------------------
Confidence 210 00111122221 001 13555655543 577777 11000
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecc--cHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASL--ALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1113 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfai--glerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~ 1113 (1196)
..+ ...+.-|+ ++||++.+|.++ ..+.+ .++.+|+|++.+ +....+|+++++.
T Consensus 554 -------------------~~~-pv~ihrai~GsiERli~iL~e~~~g~~p~w-lsp~qv~Vipv~-~~~~~~A~~va~~ 611 (686)
T PLN02908 554 -------------------IER-PVMIHRAILGSVERMFAILLEHYAGKWPFW-LSPRQAIVVPIS-EKSQDYAEEVRAQ 611 (686)
T ss_pred -------------------CCC-CEEEEeCceEhHHHHHHHHHHHcCCCCCCC-CCCceEEEEEEC-HHHHHHHHHHHHH
Confidence 000 01121112 799999988532 22222 357799999996 6778899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1114 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1114 Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
||++|++|+++.. ++++++++++|++.|+++++++|++|.++|+|+||++++++|..++++++++.+++..++
T Consensus 612 LR~~Gi~vevd~~-~~~l~kkir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~ 684 (686)
T PLN02908 612 LHAAGFYVDVDVT-DRKIQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAE 684 (686)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhh
Confidence 9999999998776 679999999999999999999999999999999999999999999999999999877653
No 404
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3.6e-31 Score=325.94 Aligned_cols=261 Identities=22% Similarity=0.275 Sum_probs=175.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+....| .++...+.+++.++..+....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~- 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPV- 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhccc-
Confidence 458999999999999999999999988 89999998753221 1111111 223333444444433321100
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 515 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 515 (1196)
.......+++||||++ ++|.+++.....
T Consensus 203 ---------------------------------~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 203 ---------------------------------SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred ---------------------------------ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 0123457899999997 589888864321
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCc
Q 000993 516 --FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592 (1196)
Q Consensus 516 --l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1196)
.....+..++.||+.||+|||+++|+||||||+|||++. ++.+||+|||+|+.+.... .....
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------~~~~~ 315 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------NYIPK 315 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------ccCCc
Confidence 123456789999999999999999999999999999986 5799999999997543211 11123
Q ss_pred CccccccCCCchhccCCC---------------------CCCCcchhHHHHHHHHHhhcCCchhHH-HHHHHHHhhhcCC
Q 000993 593 GQVGTYFYTAPEIEQGWP---------------------KIDEKADMYSLGIVFFELWHPFSTAME-RQIVLSDLKQKGE 650 (1196)
Q Consensus 593 ~~~GT~~Y~APE~l~~~~---------------------~~s~ksDVwSlGviLyELltPf~~~~~-~~~~~~~l~~~~~ 650 (1196)
..++|+.|||||++.... .++.++|||||||+||||++|...... .......+.....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 467899999999764311 244567999999999999985432222 1111111111110
Q ss_pred ------------CCCccc-------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 651 ------------LPPSWV-------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 651 ------------~p~~~~-------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+... .......+||++||+.||.+|||+.++|+||||....
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 000000 0112345899999999999999999999999998754
No 405
>PRK09194 prolyl-tRNA synthetase; Provisional
Probab=99.97 E-value=4.5e-30 Score=315.89 Aligned_cols=434 Identities=12% Similarity=0.107 Sum_probs=275.6
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.++|+++|+|.+++++++|++.+++.++++||++|.||.| ++.. +.+...++||+|.|++|+.++|||+.+.
T Consensus 33 ~~~~~G~~~~lP~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~l~LrPt~e~ 112 (565)
T PRK09194 33 RKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRDFVLGPTHEE 112 (565)
T ss_pred cccCCCeeEECccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCEEEECCCChH
Confidence 457899999999999999999999999999999999999999 3332 3566788999999999999999997776
Q ss_pred HHHHHHHh----CCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchH---HHHHHHHHHHHHcCCCC
Q 000993 812 PFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 812 ~iaR~~a~----~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L~~lgi~~ 880 (1196)
+++.++.. ++..|+|+||+|++||+| +|+.| .+||+|.|+++||.++..+|+ +++.++.++|+.||+.
T Consensus 113 ~~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~- 191 (565)
T PRK09194 113 VITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLDETYDAMYQAYSRIFDRLGLD- 191 (565)
T ss_pred HHHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCChHHHHHHHHHHHHHHHHHHHHhCCc-
Confidence 66554443 345799999999999998 88865 456999999999999888898 6677779999999993
Q ss_pred ceEEEeCcHHHHHHHH------------------HHcCCCHHHHHHHHHHHHHhc---CCCCCcccccccHHHHHHHHHH
Q 000993 881 SCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMG---SLRPQSSEWKSKWVVIRRQLLQ 939 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l------------------~~lgl~~~~~~~l~~~l~~~d---~~~~~~~~~k~~~~~~~~~~~~ 939 (1196)
|.+.+++++.+.+.. ..|+.......+....-...+ .+.........+. .++..
T Consensus 192 -~~~~~~~~g~~gg~~s~e~~~~~~~g~~~~~~c~~c~~~~n~e~a~~~~~~~~~~~~~~~~v~~p~~~t~----~e~a~ 266 (565)
T PRK09194 192 -FRAVEADSGAIGGSASHEFMVLADSGEDTIVYSDESDYAANIEKAEALPPPRAAAEEALEKVDTPNAKTI----EELAE 266 (565)
T ss_pred -cEEEEcccccCCCceeEEEEEecCCCceEEEEeCCCCcchhhhhhcccCCCCccccccceeecCCCCCcH----HHHHH
Confidence 999988866654432 122221111110000000000 0000000000011 12222
Q ss_pred hcCCcHHHHHH--H----HHH-HHHhcCChhhHHHHHhccCCCC---hHHHHHHHHH------HHHHcCCC--ceEEEcC
Q 000993 940 ELNLAEAVVNR--L----QTV-GLRFCGAADQALPRLRGALPAD---KPTRKALDEL------YLRIWRIE--KNIYIDA 1001 (1196)
Q Consensus 940 ~~~l~~~~~~~--l----~~l-~~~~~g~~~~~l~~l~~~~~~~---~~~~~~l~~L------~l~~~g~~--~~i~~Dl 1001 (1196)
..+++....-+ + ..+ +..+.|+..--+.++++.+... ....+.+.++ .+.-+|.. -.+.+|.
T Consensus 267 ~lg~~~~~~~KtLi~~~~~~~~lvvvp~d~~vn~~kl~~~lg~~~l~~a~~eel~~~~g~~~G~v~P~Gl~~~v~viiD~ 346 (565)
T PRK09194 267 FLNVPAEKTVKTLLVKADGELVAVLVRGDHELNEVKLENLLGAAPLELATEEEIRAALGAVPGFLGPVGLPKDVPIIADR 346 (565)
T ss_pred HhCCCHHHeeEEEEEEeCCeEEEEEeecchhhhHHHHHhhcCCcccccCCHHHHHHhhCCCCCccCcccCCCCceEEEec
Confidence 23332221000 0 000 0012333333344444433211 0111222222 11222221 2577888
Q ss_pred CCCCCCCCccce-----EEEEEe-----------------cCCCCccc--------ccccc-ccccccccchhhhhcccc
Q 000993 1002 LMPPIESYHRNL-----FFQVFS-----------------VKEKYPAT--------LVEGT-LLAVGGRYDYLLHRMWDR 1050 (1196)
Q Consensus 1002 ~lvrgl~YYTG~-----vFe~~~-----------------~~~~~~~~--------~~~~~-~I~~GGRYD~L~~~fg~~ 1050 (1196)
++...-++|+|- -|.... .+...|.- .-+.+ ..--|=+|-. .|+..
T Consensus 347 sl~~~~~~~~gan~~g~h~~~~~~~~d~~~~~~~d~~~~~~g~~c~~c~~~l~~~~~iEvGh~f~lG~~ys~---~~~~~ 423 (565)
T PRK09194 347 SVADMSNFVVGANEDDYHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGGTLKIARGIEVGHIFQLGTKYSE---AMNAT 423 (565)
T ss_pred cccccccccccCCCCCceeeCCccCcCCCcccccchhhhhcCCCCCCCCceeEEeeeEEEEEEecCCcchhh---ccCCE
Confidence 877766666551 110000 00111100 00111 1123555553 24321
Q ss_pred ccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchHHHHHHHHHHHHHcCCeEE
Q 000993 1051 EYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVERMELVAELWEENIKAQ 1122 (1196)
Q Consensus 1051 ~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~a~~~a~~Lr~~Gi~ve 1122 (1196)
+...-|+.+.+.-..|+||++||+.++.+ +...+...+|.+|+|++.+ +++...+|.++++.||+.|++|.
T Consensus 424 -~~~~~g~~~~~~m~~~gIGv~Rli~al~e~~~d~~gl~~P~~iaP~~v~Iv~~~~~~~~~~~~a~~i~~~L~~~gi~v~ 502 (565)
T PRK09194 424 -VLDENGKAQPLIMGCYGIGVSRLVAAAIEQNHDEKGIIWPKAIAPFDVHIVPVNMKDEEVKELAEKLYAELQAAGIEVL 502 (565)
T ss_pred -EECCCCCEEeEEEeeEechHHHHHHHHHHhhccccCccCCCccCCceEEEEECCCCcHHHHHHHHHHHHHHhccCCeEE
Confidence 12223333333345679999999888752 3233344678899999984 23467889999999999999999
Q ss_pred EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1123 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1123 l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
+++. +.++++++++|+..|+|++|+||++|+++|+|+||++.+|+|..++++++++.+.
T Consensus 503 ~Ddr-~~~~g~k~~~ad~~GiP~~iiiG~~e~~~~~v~v~~r~~ge~~~v~~~~l~~~i~ 561 (565)
T PRK09194 503 LDDR-KERPGVKFADADLIGIPHRIVVGDRGLAEGIVEYKDRRTGEKEEVPVDELVEFLK 561 (565)
T ss_pred EECC-CCCHHHHHHHHHhcCCCEEEEEcCccccCCeEEEEECCCCceEEEeHHHHHHHHH
Confidence 8877 6799999999999999999999999999999999999999999999999988876
No 406
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=317.05 Aligned_cols=247 Identities=34% Similarity=0.495 Sum_probs=191.3
Q ss_pred EeeeccCCcEE-EEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcC
Q 000993 386 LQPLGHGGFGH-VVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 386 ~~~LG~G~fG~-Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
-+.+|.|+.|+ ||+|... |+.||||.+-. +...-..+|+..|+.- .|||||++|+. |
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~--E------------ 572 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCS--E------------ 572 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEee--c------------
Confidence 35689999997 7999886 99999997642 2234567999999988 69999999854 2
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCC---HHHHHHHHHHHHHHHHHHHhCC
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFD---KELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~---e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
++..++||..|.|..+|.+++... ..+. .-..+..+.|+++||+|||+.+
T Consensus 573 --------------------------~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 573 --------------------------QDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred --------------------------cCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 356789999999999999999874 1111 1345788999999999999999
Q ss_pred CcccCCCcCcEEecC---CC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 540 IIHRDLTPNNIFFDA---RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 540 IiHrDLKp~NILld~---~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||||||||+||||+. ++ .++|+|||+++.+..... .+++ ..+..||-+|+|||++.. ..-+.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-----------S~~r-~s~~sGt~GW~APE~L~~-~~~~~ 693 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-----------SFSR-LSGGSGTSGWQAPEQLRE-DRKTQ 693 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCcc-----------hhhc-ccCCCCcccccCHHHHhc-cccCc
Confidence 999999999999976 33 589999999998754321 1111 456689999999999998 44577
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|+.++ ||.....++..+ +.....+..-....-.++.+||.+|++++|..||+|.++|.||+|-
T Consensus 694 avDiFslGCvfyYvltgG~HpFGd~~~R~~NI--l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQANI--LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccchhhcCceEEEEecCCccCCCchHHhhhhh--hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 9999999999999985 999887766532 2222222111011011889999999999999999999999999987
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
..+.
T Consensus 772 ~~ek 775 (903)
T KOG1027|consen 772 DSEK 775 (903)
T ss_pred ChHH
Confidence 7654
No 407
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=294.89 Aligned_cols=251 Identities=26% Similarity=0.392 Sum_probs=191.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CC----eeeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QH----VVRYYQAWFE 451 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pn----IV~l~~~~~e 451 (1196)
...++|.++..+|+|.||.|..|.+..++..||||+++.-. ...+...-|+.+|.++.+ |+ +|++.++|
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-- 160 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-- 160 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh--
Confidence 34688999999999999999999999999999999987322 234456679999999932 22 33333322
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa 529 (1196)
....+.+||+|.++.|+.+++..+ .+|+..+++.++.|++
T Consensus 161 --------------------------------------dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~ 202 (415)
T KOG0671|consen 161 --------------------------------------DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLL 202 (415)
T ss_pred --------------------------------------hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHH
Confidence 235678999999999999999765 4699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC--------------------CCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR--------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~--------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
++++|||+++++|-||||+|||+.+. ..+||+|||.|++-..
T Consensus 203 ~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e------------------ 264 (415)
T KOG0671|consen 203 ESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE------------------ 264 (415)
T ss_pred HHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc------------------
Confidence 99999999999999999999998432 2489999999986321
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcC---CchhHHHHH--HHHHhhhcCCCCCccc--------
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP---FSTAMERQI--VLSDLKQKGELPPSWV-------- 656 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltP---f~~~~~~~~--~~~~l~~~~~~p~~~~-------- 656 (1196)
.++..+.|..|.|||++.+ -.++..+||||+||||+|++++ |....+.+. .++.+ .+++|....
T Consensus 265 ~hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI--lGp~P~~mi~r~~~~Ky 341 (415)
T KOG0671|consen 265 HHSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI--LGPIPSRMIKKTRKEKY 341 (415)
T ss_pred CcceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh--hCCCcHHHhhhhhhHhh
Confidence 2356689999999999999 4589999999999999999874 333333221 11111 111111000
Q ss_pred --------------------------------cCC---HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 --------------------------------AKF---SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 --------------------------------~~~---~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
... -++.+||++||..||.+|+|+.|+|+||||...
T Consensus 342 f~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 342 FRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 000 135699999999999999999999999999864
No 408
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=293.31 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=187.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+....+.+.||+|.||.||+|... ++.||||+++.. ..+.+..|-.+.+. +.|+||++++++= +.+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~e-kr~---- 276 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAE-KRG---- 276 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchh-ccC----
Confidence 456677889999999999999886 799999999743 34456666666554 5899999998652 100
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......++||++|.+ |+|.++|.. ..+++....+++..+++||+|||
T Consensus 277 -------------------------------t~~~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 277 -------------------------------TADRMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred -------------------------------CccccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhc
Confidence 012446799999997 799999975 45899999999999999999999
Q ss_pred hC---------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 537 GQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 537 s~---------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+. .|+|||||++|||+.+|+++.|+|||+|..+.... . .-+..+.+||.+|||||+|.
T Consensus 325 ee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~-~------------~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 325 EELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK-P------------QGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred ccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC-C------------CcchhhhhhhhhhcCHHHHh
Confidence 63 59999999999999999999999999999875221 1 11234479999999999998
Q ss_pred CCCCCC-----CcchhHHHHHHHHHhhc---------------CCchh-------HHHHHHHHHhhhcCCCCCccccCC-
Q 000993 608 GWPKID-----EKADMYSLGIVFFELWH---------------PFSTA-------MERQIVLSDLKQKGELPPSWVAKF- 659 (1196)
Q Consensus 608 ~~~~~s-----~ksDVwSlGviLyELlt---------------Pf~~~-------~~~~~~~~~l~~~~~~p~~~~~~~- 659 (1196)
|.-++. .+.||||+|.+||||++ ||... .+++...-.-+..+.+|..|....
T Consensus 392 gainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~ 471 (534)
T KOG3653|consen 392 GAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAG 471 (534)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCcc
Confidence 843333 36899999999999973 33211 112222222233455666676542
Q ss_pred -HHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 660 -SEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 660 -~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.-+++.+..||+.||+.|.|+.=+-+
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 35689999999999999999765543
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=310.19 Aligned_cols=270 Identities=26% Similarity=0.460 Sum_probs=220.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+++..+|.|+||.||+++++.+++..|+|++++... ....-+..|+-+++..+|||||.|++.+..
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr--------- 83 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--------- 83 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhh---------
Confidence 799999999999999999999999999999999987543 234557789999999999999999988742
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+||.||||+ |+|.+..+-.+++++-++....+..+.||+|||+.|
T Consensus 84 -------------------------------~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g 132 (829)
T KOG0576|consen 84 -------------------------------RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG 132 (829)
T ss_pred -------------------------------hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC
Confidence 456899999997 599999988899999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc--cCCCCCCCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE--QGWPKIDEKAD 617 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l--~~~~~~s~ksD 617 (1196)
=+|||||-.|||+++.|.+|++|||.+..+... -....++.|||.|||||+- ...+.|+..+|
T Consensus 133 k~hRdiKGanilltd~gDvklaDfgvsaqitat---------------i~KrksfiGtpywmapEvaaverkggynqlcd 197 (829)
T KOG0576|consen 133 KIHRDIKGANILLTDEGDVKLADFGVSAQITAT---------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 197 (829)
T ss_pred cccccccccceeecccCceeecccCchhhhhhh---------------hhhhhcccCCccccchhHHHHHhccccccccc
Confidence 999999999999999999999999999765311 1235678999999999974 33356999999
Q ss_pred hHHHHHHHHHhh--c-CCchhHHHHHHHHHhhhcCCCCCcc---ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 618 MYSLGIVFFELW--H-PFSTAMERQIVLSDLKQKGELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 618 VwSlGviLyELl--t-Pf~~~~~~~~~~~~l~~~~~~p~~~---~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|++|+...|+- + |....+++....-.-. .+..||.. ...++.+-+|++.+|.++|++||+++.+|+|+|..+
T Consensus 198 iwa~gitAiel~eLqpplfdlhpmr~l~LmTk-S~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 198 IWALGITAIELGELQPPLFDLHPMRALFLMTK-SGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ccccccchhhhhhcCCcccccchHHHHHHhhc-cCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 999999999985 3 6556666555433322 33334322 334567889999999999999999999999998776
Q ss_pred c-hHHHHHHHHHhcCCCC
Q 000993 692 M-EYELLDNILRMMHSSE 708 (1196)
Q Consensus 692 ~-~~~~~~~~~~~~~~~~ 708 (1196)
. .....-.++....+++
T Consensus 277 ~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 277 TLSRRLAIELLDKVNNPN 294 (829)
T ss_pred chhhHHHHHHHHHccCCC
Confidence 5 3334445566666655
No 410
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-31 Score=309.99 Aligned_cols=246 Identities=30% Similarity=0.443 Sum_probs=186.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
-+..-+.||+|+||.||+++++.+|+.||||.++... .....+...+|+++|++++|||||++++.= ++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~ie-e~--------- 82 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIE-ET--------- 82 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccC-Cc---------
Confidence 3455678999999999999999999999999987543 445677889999999999999999998652 10
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
... | .-...-.++||||. |||+..+++. ..+++.+.+.++.+++.||.|||.
T Consensus 83 ~~~-~-----------------------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE 138 (732)
T KOG4250|consen 83 KFL-G-----------------------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE 138 (732)
T ss_pred ccc-C-----------------------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 01233479999996 6999999753 469999999999999999999999
Q ss_pred CCCcccCCCcCcEEec--CCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 538 QGIIHRDLTPNNIFFD--ARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld--~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
+||+||||||.||++- .+| .-||+|||.|+-+..+. ..++.+||+.|.+||.+.....|+
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------~~~S~vGT~~YLhPel~E~q~~y~ 202 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------LFTSLVGTEEYLHPELYERQKKYT 202 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----------------eeeeecCchhhcChHHHhhccCcC
Confidence 9999999999999984 334 37999999999765332 236789999999999998546799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCC-------------------CCCccccCCH----HHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGE-------------------LPPSWVAKFS----EQE 663 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~-------------------~p~~~~~~~~----~l~ 663 (1196)
..+|.|||||++|++.| ||.+.. ..++...++..+.. +|. ....++ .+.
T Consensus 203 ~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~ 281 (732)
T KOG4250|consen 203 ATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLT 281 (732)
T ss_pred ceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhh
Confidence 99999999999999998 664332 22233333222111 121 112222 345
Q ss_pred HHHHHcccCCCCCCCC
Q 000993 664 SLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPt 679 (1196)
.++..+|..+|.+|..
T Consensus 282 kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 282 KWLASMLEWNPRKRGH 297 (732)
T ss_pred HHHHHHHhhhHHHhCC
Confidence 7888899999999984
No 411
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=293.18 Aligned_cols=263 Identities=28% Similarity=0.435 Sum_probs=206.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|-++..||+|||++||+|-+....+.||||+-.+..... .......+|..+.+.|+||.||++|++|-
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee-----
Confidence 45778889999999999999999889999999865443211 12345779999999999999999999872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.+...+|-|+|||+| +|.-+|.....+++.+++.|+.||+.||.|
T Consensus 538 ----------------------------------lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 538 ----------------------------------LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred ----------------------------------eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 234567899999987 898899999999999999999999999999
Q ss_pred HHhC--CCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-
Q 000993 535 IHGQ--GIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 608 (1196)
Q Consensus 535 LHs~--gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 608 (1196)
|... .|||.||||.|||+-+ -|.+||+|||+++........... +.. -++-..||.+|++||.+.-
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------Gme-LTSQgAGTYWYLPPEcFvVg 655 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------GME-LTSQGAGTYWYLPPECFVVG 655 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc-------cee-eecccCceeeecCcceeecC
Confidence 9987 5999999999999954 377999999999987544322110 110 1234579999999997642
Q ss_pred --CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh---h-cCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 609 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK---Q-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 609 --~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~---~-~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
.+..+.|+||||+|||+|.++. ||......+..+.... . ...+|+. +..+++++.+|++||+..-.+|..
T Consensus 656 kePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 656 KEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred CCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 3568999999999999999996 9986655544433211 1 2234443 456789999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000993 680 ATELLQDALPPQ 691 (1196)
Q Consensus 680 a~eiL~~~~~~~ 691 (1196)
..++..||++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999987653
No 412
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9e-32 Score=282.88 Aligned_cols=262 Identities=27% Similarity=0.390 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.+--+.||-|+||.||.+.+..+|+.||+|++..-..+.....++.+|+++|..++|.|++..++...-. ..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~------ 126 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NP------ 126 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-Cc------
Confidence 33444789999999999999999999999999876656666678899999999999999999887654110 00
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.--..+|++.|++..+|..++.+...++.+.+.-+++||++||.|||+.+|.
T Consensus 127 ----------------------------dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~IL 178 (449)
T KOG0664|consen 127 ----------------------------SFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANIL 178 (449)
T ss_pred ----------------------------hHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchh
Confidence 0012368899999999999999889999999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||.|+|++++..+||||||+|+.....+ +..++..+-|..|.|||++.|...|+.+.||||.
T Consensus 179 HRDIKPGNLLVNSNCvLKICDFGLARvee~d~--------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV 244 (449)
T KOG0664|consen 179 HRDIKPGNLLVNSNCILKICDFGLARTWDQRD--------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV 244 (449)
T ss_pred hccCCCccEEeccCceEEecccccccccchhh--------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehh
Confidence 99999999999999999999999998643221 2345556789999999999998899999999999
Q ss_pred HHHHHHhhc---CCchhHHHHH----------------------HHHHhhhcCCCCCcccc---------CCHHHHHHHH
Q 000993 622 GIVFFELWH---PFSTAMERQI----------------------VLSDLKQKGELPPSWVA---------KFSEQESLLR 667 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~----------------------~~~~l~~~~~~p~~~~~---------~~~~l~~LI~ 667 (1196)
|||+.||+. -|....+-+. ....+...+..+|+... ...+...++.
T Consensus 245 GCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~ 324 (449)
T KOG0664|consen 245 GCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQ 324 (449)
T ss_pred hHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHH
Confidence 999999973 2221111110 01111122222332221 1235678999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++..||++|.+.++.+.|++....
T Consensus 325 ~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 325 KLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred HHhCCCCcccccHhhhccccccccc
Confidence 9999999999999999999876554
No 413
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.4e-29 Score=274.30 Aligned_cols=238 Identities=34% Similarity=0.550 Sum_probs=193.4
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccc
Q 000993 393 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 472 (1196)
Q Consensus 393 ~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 472 (1196)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..++.++|+||+++++.+..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------------------- 58 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--------------------- 58 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee---------------------
Confidence 689999999998899999999875443321 5789999999999999999999987632
Q ss_pred cccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEE
Q 000993 473 FSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551 (1196)
Q Consensus 473 ~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NIL 551 (1196)
....+++|||+++ +|..++.....++...++.++.+++.++.|||+.+++|+||+|+||+
T Consensus 59 -------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 59 -------------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred -------------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 2467999999986 99999987766999999999999999999999999999999999999
Q ss_pred ecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-
Q 000993 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 630 (1196)
Q Consensus 552 ld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt- 630 (1196)
++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++
T Consensus 120 ~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 120 LDEDGHVKLADFGLARQLDPGG----------------LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ECCCCcEEEccccceeeecccc----------------ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999998654221 1234568889999999886 567889999999999999996
Q ss_pred --CCchhHHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 631 --PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 631 --Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||.............. ....+. .....+.++.+++.+||..+|++||++.++++|+|+
T Consensus 183 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 183 KPPFPGDDQLLELFKKIG-KPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCCCCCcHHHHHHHHh-ccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 7765333333333332 222221 211156789999999999999999999999999986
No 414
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=282.45 Aligned_cols=256 Identities=27% Similarity=0.381 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.-++.+|.|.- .|..|-+...++.||+|++..........++..+|..++..++|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~-------- 87 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQ-------- 87 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcc--------
Confidence 45666788999988 788888888999999999876665566677899999999999999999999887321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
........+|+|||||..+|.+.+. -.++...+.+++.|++.|+.|||+.||
T Consensus 88 --------------------------~~l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 88 --------------------------KTLEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred --------------------------ccHHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 2223345689999999999999887 447788899999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||++..++.+||.|||+|+.- +..+..+..+.|..|.|||++.+.+ |...+||||
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e----------------~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS 202 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTE----------------DTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS 202 (369)
T ss_pred eecccCcccceecchhheeeccchhhccc----------------CcccccCchhheeeccCchheeccC-Ccccchhhh
Confidence 99999999999999999999999999752 1224567789999999999999954 999999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHH--------------HHh--------h---------hcCCCCC-ccc-------cC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVL--------------SDL--------K---------QKGELPP-SWV-------AK 658 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~--------------~~l--------~---------~~~~~p~-~~~-------~~ 658 (1196)
+||++.||++ -|.+.+...... ..+ + ....+|. .|. ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999974 122111111000 000 0 0001111 111 11
Q ss_pred CHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 659 FSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 659 ~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
..-+++|+.+||-.||++|.+++++|+||+++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 23468999999999999999999999999887
No 415
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=9.4e-29 Score=297.75 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=180.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc----------------cCCcEEEEEEEecCCCCchhHHH--------------HH
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK----------------LDGRHYAVKKIRLKDKSLPVNDR--------------IL 428 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~----------------~~g~~vAVK~i~~~~~~~~~~~~--------------~~ 428 (1196)
..++|++.++||+|+||.||+|.+. ..++.||||.+..... ...++ ..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4689999999999999999999752 2456899999865322 11222 33
Q ss_pred HHHHHHHhcCCCCe-----eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC
Q 000993 429 REVATLSRLQHQHV-----VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503 (1196)
Q Consensus 429 ~Ev~iL~~L~HpnI-----V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~ 503 (1196)
.|+..+.+++|.++ ++++++|.... .+........|+||||++
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~--------------------------------~~g~~~~~~~~LV~Ey~~ 268 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNT--------------------------------ADGAFTKGSQWLVWKFES 268 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhccccc--------------------------------ccccccCCceEEEEEcCC
Confidence 46666777766554 44454442110 011112345799999997
Q ss_pred -CCHHHHHhhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCe
Q 000993 504 -RTLRQVFESY------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558 (1196)
Q Consensus 504 -gsL~~~l~~~------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~v 558 (1196)
++|.++++.. ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+
T Consensus 269 ~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~ 348 (507)
T PLN03224 269 DATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQV 348 (507)
T ss_pred CCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcE
Confidence 5898887532 124567788999999999999999999999999999999999999
Q ss_pred EEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-------------------C--CCcch
Q 000993 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-------------------I--DEKAD 617 (1196)
Q Consensus 559 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-------------------~--s~ksD 617 (1196)
||+|||+++...... ........+|+.|+|||.+..... | ..+.|
T Consensus 349 kL~DFGla~~~~~~~--------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~D 414 (507)
T PLN03224 349 KIIDFGAAVDMCTGI--------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFD 414 (507)
T ss_pred EEEeCcCccccccCC--------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccc
Confidence 999999997542110 011122345899999998764211 1 23579
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHH-------HHHhh---hcCCCCCccccCCHHHHHHHHHcccCCC---CCCCCH
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIV-------LSDLK---QKGELPPSWVAKFSEQESLLRRLMSPSP---SDRPSA 680 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~-------~~~l~---~~~~~p~~~~~~~~~l~~LI~~cL~~dP---~~RPta 680 (1196)
|||+||++|+|++ ||......... ...++ ......+.+...++...+|+.+||..+| .+|+|+
T Consensus 415 vwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa 494 (507)
T PLN03224 415 SYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV 494 (507)
T ss_pred hhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCH
Confidence 9999999999986 44322111100 01111 0111122345567789999999999876 689999
Q ss_pred HHHHhccCCCC
Q 000993 681 TELLQDALPPQ 691 (1196)
Q Consensus 681 ~eiL~~~~~~~ 691 (1196)
.++|+|+||..
T Consensus 495 ~eaL~Hp~f~~ 505 (507)
T PLN03224 495 GQALSHRFFLP 505 (507)
T ss_pred HHHhCCCCcCC
Confidence 99999999964
No 416
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=5.1e-30 Score=264.52 Aligned_cols=253 Identities=21% Similarity=0.361 Sum_probs=198.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++++++|+|-|++|+.|.+..+++.++||+++.. ....+.||+++|..|+ ||||+++++...+.
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp----- 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDP----- 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----
Confidence 468999999999999999999999999999999998642 2457899999999996 99999999775332
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+....+++||+.. +...+. ..++.-.++.++.+++.||.|||
T Consensus 106 ---------------------------------~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 106 ---------------------------------ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred ---------------------------------cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH
Confidence 23445689999975 555544 45778889999999999999999
Q ss_pred hCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+||+|||+||.|++||.. -.++|+|+|+|.++.... .-+.++.+..|--||.+-..+.|+.+
T Consensus 150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~----------------eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK----------------EYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc----------------eeeeeeehhhcCCchheeechhcccc
Confidence 9999999999999999975 569999999998864332 12445778888999999988889999
Q ss_pred chhHHHHHHHHHhhc---CCchh-HHHHHHHHHhhh-------------cCCCCC--------------------ccc-c
Q 000993 616 ADMYSLGIVFFELWH---PFSTA-MERQIVLSDLKQ-------------KGELPP--------------------SWV-A 657 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~-~~~~~~~~~l~~-------------~~~~p~--------------------~~~-~ 657 (1196)
-|||||||+|..|+. ||... ++.....++..- .-.++| .-. -
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 999999999999984 77532 222221111100 000111 111 1
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++++.+|+.++|..|..+|+|+.+++.||||....
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 347899999999999999999999999999987643
No 417
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-29 Score=307.40 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=198.3
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
++.+.+.||.|.||.|++|.... ....||||.++..... .....+..|+++|+.+ .||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 44556699999999999998541 1457999998754444 6678899999999999 69999999999843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l 516 (1196)
...+++|+|||. |+|..+++... .+
T Consensus 374 --------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 374 --------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred --------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 345799999996 79999997654 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc-
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV- 595 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 595 (1196)
+....+.++.||+.||+||++..++||||-.+|||+..+..+||+|||+|+........ ..+...
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y--------------~~~~~~~ 481 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY--------------RTKSSAG 481 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce--------------EecCCCC
Confidence 88899999999999999999999999999999999999999999999999864322211 001112
Q ss_pred -ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 596 -GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 596 -GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
-...|||||.+.. ..|+.++|||||||+||||++ |+.+....+.....+ ..+.....+..+++++.++++.||
T Consensus 482 ~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~~c~~eiY~iM~~CW 559 (609)
T KOG0200|consen 482 TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPEHCSDEIYDLMKSCW 559 (609)
T ss_pred ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHh
Confidence 2345999999998 789999999999999999986 887644233334433 355555555667889999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.+|.+||++.++...
T Consensus 560 ~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 560 NADPEDRPTFSECVEF 575 (609)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999863
No 418
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4e-29 Score=294.38 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=200.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++..++||.|+||+||+|.|...|+ +||||++. ..........+++|+.+|.+++|||+++++++|...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~-~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s----- 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLI-EFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS----- 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEee-ccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc-----
Confidence 34456799999999999999976665 68999876 344455678899999999999999999999988421
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.+-||++|++ |.|.++++.. +.+-....+.|..||++||.||
T Consensus 771 ------------------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL 814 (1177)
T KOG1025|consen 771 ------------------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL 814 (1177)
T ss_pred ------------------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 2468999998 6999999754 5688889999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|.++++||||-.+|||+....++||.|||+|+.+...... .......-.+-|||-|.+.. +.|+.+
T Consensus 815 e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e-------------y~~~~gK~pikwmale~i~~-~~~thq 880 (1177)
T KOG1025|consen 815 EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE-------------YSAPGGKVPIKWMALESIRI-RKYTHQ 880 (1177)
T ss_pred HhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc-------------ccccccccCcHHHHHHHhhc-cCCCch
Confidence 9999999999999999999999999999999987543311 11223344677999999887 679999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++||++| |+....-.++ ..+.+.+...+.++..+-++..++.+||..|+..||+++++...
T Consensus 881 SDVWsfGVtiWElmTFGa~Py~gi~~~eI--~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 881 SDVWSFGVTIWELMTFGAKPYDGIPAEEI--PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred hhhhhhhhhHHHHHhcCCCccCCCCHHHh--hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 999999999999997 7766555444 23333555455555666789999999999999999999998753
No 419
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2e-28 Score=323.01 Aligned_cols=236 Identities=22% Similarity=0.343 Sum_probs=177.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|...+.||+|+||.||+|+++.+|..||||++...... ..+|+..+++++|||||+++++|.+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~--------- 754 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRS--------- 754 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEc---------
Confidence 4566677899999999999999989999999988632221 2346888999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--- 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH--- 536 (1196)
....|+|||||+ |+|.++++. +++..+..++.||+.||+|||
T Consensus 755 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 755 -------------------------------EKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -------------------------------CCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCC
Confidence 234689999997 699999863 889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.+|+||||||+||+++.++..++. ||.+.... ......||+.|||||++.+ ..++.++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~-~~~~~~s 859 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-------------------TDTKCFISSAYVAPETRET-KDITEKS 859 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------cCCCccccccccCcccccC-CCCCccc
Confidence 6699999999999999999888876 66543221 1123368899999999987 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHH--HH--HHHHhhh--------cCCCCCc---cccCCHHHHHHHHHcccCCCCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMER--QI--VLSDLKQ--------KGELPPS---WVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~--~~--~~~~l~~--------~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
|||||||++|||++ ||...... .. ....... ....... ......++.+++.+||+.||.+||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 99999999999997 66422110 00 0000000 0011000 011123567899999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.++++.
T Consensus 940 t~~evl~~ 947 (968)
T PLN00113 940 CANDVLKT 947 (968)
T ss_pred CHHHHHHH
Confidence 99999874
No 420
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=251.99 Aligned_cols=200 Identities=27% Similarity=0.439 Sum_probs=164.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++..+..||+|++|.|-+.+|..+|+..|+|.++..-. .....+.++|+.+..+. .+|.+|.+||+++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-------- 116 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-------- 116 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhc--------
Confidence 556667889999999999999999999999999976544 34566788888876655 79999999998744
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF----ESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l----~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+||.||.|..||..+. .+...++|...-+++..++.||.||
T Consensus 117 --------------------------------egdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L 164 (282)
T KOG0984|consen 117 --------------------------------EGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFL 164 (282)
T ss_pred --------------------------------cccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHH
Confidence 3457999999998876654 4567899999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 611 (1196)
|++ .+||||+||+||||+.+|++|+||||++-.+..+- ..+...|...|||||.+... ..
T Consensus 165 ~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi----------------Akt~daGCkpYmaPEri~~e~n~~g 228 (282)
T KOG0984|consen 165 HSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI----------------AKTMDAGCKPYMAPERINPELNQKG 228 (282)
T ss_pred HHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh----------------HHHHhcCCCccCChhhcCcccCccc
Confidence 987 79999999999999999999999999998764321 12234688899999987642 35
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAME 637 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~ 637 (1196)
|+.++||||||++++||.+ ||..+..
T Consensus 229 Y~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 229 YSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred ceeehhhhhhhhhhhhhhhccccccccCC
Confidence 8999999999999999985 6655443
No 421
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=6.5e-29 Score=280.61 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC------CCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ------HQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~------HpnIV~l~~~~~e~~ 453 (1196)
-..|.+....|+|-|++|.+|.+..-|+.||||+|+.... ....=++|+++|+.|+ .-|+++++..|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh--
Confidence 3579999999999999999999999999999999985432 2345678999999994 3477887766632
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC---CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD---HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~---~l~e~~~~~i~~qIa~ 530 (1196)
..++|+|+|-+...|.++|.+.+ .+....++.|+.|+..
T Consensus 506 --------------------------------------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLfl 547 (752)
T KOG0670|consen 506 --------------------------------------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFL 547 (752)
T ss_pred --------------------------------------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence 46899999999999999998876 4888899999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||..|-..||+|.||||+|||+++. ..+||||||.|.....+. -+.+.-+..|.|||++.|
T Consensus 548 ALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene-----------------itPYLVSRFYRaPEIiLG- 609 (752)
T KOG0670|consen 548 ALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENE-----------------ITPYLVSRFYRAPEIILG- 609 (752)
T ss_pred HHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccccc-----------------ccHHHHHHhccCcceeec-
Confidence 9999999999999999999999876 568999999998765443 233455678999999999
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH-------------------------------------------
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS------------------------------------------- 643 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~------------------------------------------- 643 (1196)
-.|+...|+||+||+||||+| -|.+..+.+...-
T Consensus 610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~ 689 (752)
T KOG0670|consen 610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKR 689 (752)
T ss_pred CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeE
Confidence 569999999999999999986 2433322222110
Q ss_pred --------------HhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 644 --------------DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 644 --------------~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.+...+.+|.........+++|+..||..||++|.|..++|+|||+..
T Consensus 690 ~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 690 TVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 111111122222222345789999999999999999999999999864
No 422
>PRK12325 prolyl-tRNA synthetase; Provisional
Probab=99.95 E-value=7.9e-27 Score=278.65 Aligned_cols=371 Identities=11% Similarity=0.095 Sum_probs=240.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecC---CC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSH---EL 809 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRP---D~ 809 (1196)
..+.|+.+|+|....+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||+|.|.+++.++||| ++
T Consensus 34 ~~~~G~~~~lP~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~~~L~Pt~e~~ 113 (439)
T PRK12325 34 QQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDREMLYGPTNEEM 113 (439)
T ss_pred ccCCceEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCEEEEcCCCcHH
Confidence 45899999999999999999999999999999999999999 222 3456788999999999999999999 77
Q ss_pred cHHHHHHHHh-CCCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCc---cchHHHHHHHHHHHHHcCCCCc
Q 000993 810 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 810 T~~iaR~~a~-~~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~---~aDaEvI~la~~~L~~lgi~~~ 881 (1196)
|++++|.... ++.+|+|+||+|++||+| +|+. |.+||+|-++.+|+.+.. .+..+++.+..++++.||+..
T Consensus 114 ~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~~- 192 (439)
T PRK12325 114 ITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLRTFARLGLKA- 192 (439)
T ss_pred HHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCce-
Confidence 8888886554 566899999999999998 6664 456799999999987632 456799999999999999974
Q ss_pred eEEEeCcHHHHHHHH-------HHcCCCHHHHHHHH-HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIW-------SWAGIKAEHREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 953 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l-------~~lgl~~~~~~~l~-~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~ 953 (1196)
+.+.++...+ .+.. ...|-++. ..+ .+.+... .. . ...|+ . ..+..
T Consensus 193 ~~v~~~~~~~-gg~~s~ef~~~~~~Ge~~~---~~c~~~~~~~~-~~-~----~~~~~---------------~-~~l~~ 246 (439)
T PRK12325 193 IPMRADTGPI-GGDLSHEFIILAETGESTV---FYDKDFLDLLV-PG-E----DIDFD---------------V-ADLQP 246 (439)
T ss_pred EEEEEccCCC-CCCcceeeEeecCCCCceE---EEcCCchhhcc-CC-C----cccCC---------------H-HHHHH
Confidence 6665544311 0000 00010000 000 0000000 00 0 00000 0 11111
Q ss_pred HHHHhcCChhhHHHHHhccCCCChHHHHHHHHHH-HHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccc
Q 000993 954 VGLRFCGAADQALPRLRGALPADKPTRKALDELY-LRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1032 (1196)
Q Consensus 954 l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~-l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~ 1032 (1196)
++. .....+..+ .++. -.+.....++ |+...++.. .|.+|..
T Consensus 247 ~l~-----------~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~ie--vg~~~~l--------------- 289 (439)
T PRK12325 247 IVD-----------EWTSLYAAT-------EEMHDEAAFAAVPEE--RRLSARGIE--VGHIFYF--------------- 289 (439)
T ss_pred HHh-----------hhcccccch-------hhhhccCCCCcCCCc--ceeecceEE--EEeeecC---------------
Confidence 110 000000000 0000 0000000000 111111111 1222211
Q ss_pred ccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchH
Q 000993 1033 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLL 1104 (1196)
Q Consensus 1033 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~ 1104 (1196)
|=+| .++||-. +....|....+--.-|++|++|++.+|.+ +...+...+|.+|+|++.. ++...
T Consensus 290 ----g~~y---s~~f~~~-y~d~~g~~~~i~~~~~GiGieRli~~l~e~~~d~~g~~~P~~iaP~qV~Iipi~~~~~~~~ 361 (439)
T PRK12325 290 ----GTKY---SEPMNAK-VQGPDGKEVPVHMGSYGIGVSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDEACD 361 (439)
T ss_pred ----cccc---cHhcCCE-EECCCCCEEeEEEeeeECCHHHHHHHHHHHhCccCCCcCCCCcCCeEEEEEecCCCCHHHH
Confidence 1223 2334321 11222333333344678899999998863 2233333567899999983 25567
Q ss_pred HHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1105 VERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1105 ~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
.+|.++++.||+.|++|+++.. +.++++++++|+..|+|++|+||++|+++|+|+||++.++++..++++++++.++
T Consensus 362 ~~a~~i~~~L~~~Gi~v~~D~~-~~~lg~ki~~a~~~giP~~iiVG~~e~~~~~V~vr~r~~~~~~~v~~~el~~~i~ 438 (439)
T PRK12325 362 AACEKLYAALSAAGIDVLYDDT-DERPGAKFATMDLIGLPWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLT 438 (439)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHhHHHHHHHHcCCCEEEEECCcccccCeEEEEEcCCCceEEEEHHHHHHHHh
Confidence 8999999999999999998877 6799999999999999999999999999999999999999999999999988764
No 423
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=282.09 Aligned_cols=197 Identities=29% Similarity=0.492 Sum_probs=170.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcC---CCCeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQ---HQHVVRYYQAWF 450 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~ 450 (1196)
..+|..++.||.|+||.|++|.++.+...|+||.|.+...- .+..-.+--|+++|..++ |+||+++++.|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 46799999999999999999999999999999998754311 011123557999999997 99999999887
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-C-CHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
++..++||+||-.+ | +|.+++.....++|.++..+++||
T Consensus 639 ---------------------------------------Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV 679 (772)
T KOG1152|consen 639 ---------------------------------------EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQV 679 (772)
T ss_pred ---------------------------------------ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHH
Confidence 34678999999985 5 999999999999999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.|+++||++||||||||-+|++++.+|-+||+|||.|...... ....++||..|+|||++.|
T Consensus 680 ~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-----------------pfd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 680 VAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-----------------PFDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC-----------------CcceeeeeccccchhhhCC
Confidence 99999999999999999999999999999999999999865322 1235789999999999999
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCc
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFS 633 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~ 633 (1196)
.+..+..-|||++||+||.+.. ||+
T Consensus 743 ~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 743 EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7777899999999999999985 664
No 424
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi.
Probab=99.95 E-value=4.3e-27 Score=286.99 Aligned_cols=439 Identities=12% Similarity=0.097 Sum_probs=270.7
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEe
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLE 804 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~la 804 (1196)
.+|.+ .+.+.|+.+|+|.+.++++.|++.+++.+.++||++|.||.| ++. +.++...++||+|.|++|+.++
T Consensus 28 rag~i--~~~~~G~~~~lP~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~l~ 105 (568)
T TIGR00409 28 RAGFI--RRLGSGLYNWLPLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGREFV 105 (568)
T ss_pred hCCCc--cccCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCEEE
Confidence 44555 357899999999999999999999999999999999999999 232 2356678999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchHHHHHH---HHHHH
Q 000993 805 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEAEVLKV---TMDIV 873 (1196)
Q Consensus 805 LRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L 873 (1196)
|||+ +|..++|.+.+++..|+|+||+|++||+| +|+.| .+||+|.|++.||.+...+|+|...+ ..++|
T Consensus 106 LrPT~Ee~~t~~~~~~i~syr~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~~~~a~~e~~~~~~~y~~if 185 (568)
T TIGR00409 106 LGPTHEEVITDLARNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEESLDATYQKMYQAYSNIF 185 (568)
T ss_pred EcCCCcHHHHHHHHHHHhhccccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCChHHHHHHHHHHHHHHHHHH
Confidence 9997 88888888888878899999999999998 88864 45699999999999989999888755 59999
Q ss_pred HHcCCCCceEEEeCcHHHHHHHH------------------HHcCCCHHHHHHHHHHHHHhc-----CCCCCcccccccH
Q 000993 874 TRFFHAESCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMG-----SLRPQSSEWKSKW 930 (1196)
Q Consensus 874 ~~lgi~~~~~i~Lg~~~i~~~~l------------------~~lgl~~~~~~~l~~~l~~~d-----~~~~~~~~~k~~~ 930 (1196)
+.||+. |.+..++++.+.+.. ..++.......+... ....+ .+......+....
T Consensus 186 ~~LgL~--~~~v~~~~g~~gg~~s~ef~~~~~~ge~~i~~c~~~~y~an~e~a~~~-~~~~~~~~~~~~~~~~tp~~~ti 262 (568)
T TIGR00409 186 SRLGLD--FRPVQADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIELAEAL-APGERNAPTAELDKVDTPNTKTI 262 (568)
T ss_pred HHhCCc--ceEEEeccccCCCccceEEeEecCCCceEEEEecCcccchhhhhhccc-CccccccccccceeecCCCCCcH
Confidence 999994 888777765443321 111111110000000 00000 0000000000000
Q ss_pred HHHHHHHHHhcCCcHHHHHHHH---------HHH-HHhcCChhhHHHHHhccCCC----ChHHHHHHHHH------HHHH
Q 000993 931 VVIRRQLLQELNLAEAVVNRLQ---------TVG-LRFCGAADQALPRLRGALPA----DKPTRKALDEL------YLRI 990 (1196)
Q Consensus 931 ~~~~~~~~~~~~l~~~~~~~l~---------~l~-~~~~g~~~~~l~~l~~~~~~----~~~~~~~l~~L------~l~~ 990 (1196)
.++....+++....-+-. .++ ..+.|+.+--..+++..+.. .....+.+..+ ++--
T Consensus 263 ----~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~v~~rgd~~vn~~k~~~~~g~~~~~~~a~~~~~~~~~g~~~g~~gp 338 (568)
T TIGR00409 263 ----AELVECFNLPAEKVVKTLLVKAVDKSEPLVALLVRGDHELNEVKAPNLLLVAQVLELATEEEIFQKIASGPGSLGP 338 (568)
T ss_pred ----HHHHHHhCCCHhHeeeEEEEEecCCccceEEEEecCcchhhHHHHHHHhccCcccccCCHHHHHHhhCCCCCccCc
Confidence 112222222211100000 000 01223322222333322100 00011111111 1111
Q ss_pred cCCC--ceEEEcCCCCCCCCC----------ccceEEE-------E-----EecCCCCcc--------ccccccc-cccc
Q 000993 991 WRIE--KNIYIDALMPPIESY----------HRNLFFQ-------V-----FSVKEKYPA--------TLVEGTL-LAVG 1037 (1196)
Q Consensus 991 ~g~~--~~i~~Dl~lvrgl~Y----------YTG~vFe-------~-----~~~~~~~~~--------~~~~~~~-I~~G 1037 (1196)
.|+. .++..|.+....-++ |++..+. + ...+...|. .+-+.+. .--|
T Consensus 339 v~~~~~~~i~~D~~~~~~~~~~~gan~~~~h~~~~~~~rd~~~~~~~d~~~~~eGd~cp~c~~~l~~~rgIEvGhiF~LG 418 (568)
T TIGR00409 339 VNINGGIPVLIDQTVALMSDFAAGANADDKHYFNVNWDRDVAIPEVADIRKVKEGDPSPDGQGTLKIARGIEVGHIFQLG 418 (568)
T ss_pred cccccCceEEechhhhcccccccccCCCCceeecccccccCCccccchhhhhhccCCCCCCCCcccccceEEEEEeccch
Confidence 1111 234556554333333 2222211 0 011111110 0011111 1235
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC--chHHHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG--GLLVERME 1109 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~------~~~~~~~~~~~~~vlv~~~~~~--~~~~~a~~ 1109 (1196)
=||-.- ||.. +...-|+.+++...-++||++||+.++. .+...+..-+|.+|.|++.... .....|.+
T Consensus 419 ~kYS~~---~~~~-~~d~~g~~~~~~mgcyGIGvsRli~aiie~~~D~~Gl~wP~~iAP~qV~Iip~~~~~~~~~~~a~~ 494 (568)
T TIGR00409 419 TKYSEA---LKAT-FLDENGKNQFMTMGCYGIGVSRLVSAIAEQHHDERGIIWPKAIAPYDVVIVVMNMKDEEQQQLAEE 494 (568)
T ss_pred hhhHHh---cCCE-EECCCCCEEEEEEeCCcchHHHHHHHHHHHhCccCCCcCChhhCCeEEEEEEcCCChHHHHHHHHH
Confidence 566644 3321 1223344444444456889999988764 2334444568899999987422 45667888
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~ 1183 (1196)
+++.|++.|++|.+++. +.+++++++.|+..|+|+.|+||.+++++|+|+|++++++++..++++++++.|..
T Consensus 495 l~~~L~~~gi~v~~DDr-~~~~G~K~~dadliGiP~~i~vG~~~l~~~~Vei~~R~~~~~~~v~~~~l~~~i~~ 567 (568)
T TIGR00409 495 LYSELLAQGVDVLLDDR-NERAGVKFADSELIGIPLRVVVGKKNLDNGEIEVKKRRNGEKQLIKKDELVECLEE 567 (568)
T ss_pred HHHHHHhCCCEEEEECC-CCCHHHHHHhhhhcCCCEEEEECCCcccCCeEEEEEcCCCceEEEEHHHHHHHHhh
Confidence 99999999999998776 56899999999999999999999999999999999999999999999999887753
No 425
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-26 Score=262.40 Aligned_cols=136 Identities=22% Similarity=0.367 Sum_probs=117.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----C---CCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----H---QHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----H---pnIV~l~~~~~e~ 452 (1196)
.+|.++++||-|.|++||+|.+..+.+.||+|+.+. .....+..+.|+++|++++ | .+||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 689999999999999999999999999999999873 2334567889999999982 3 3699999888654
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~ 530 (1196)
| ....++++|+|+.+..|..+|... ..++...+..|++||+.
T Consensus 155 G------------------------------------pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 155 G------------------------------------PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred C------------------------------------CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 3 236789999999999999999754 56999999999999999
Q ss_pred HHHHHHhC-CCcccCCCcCcEEecCC
Q 000993 531 GLAHIHGQ-GIIHRDLTPNNIFFDAR 555 (1196)
Q Consensus 531 gL~yLHs~-gIiHrDLKp~NILld~~ 555 (1196)
||.|||.. ||||-||||+|||+...
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeeecc
Confidence 99999976 99999999999999543
No 426
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.3e-25 Score=238.11 Aligned_cols=212 Identities=38% Similarity=0.710 Sum_probs=180.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 468 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~ 468 (1196)
||.|++|.||++....+|+.+++|++....... ....+.+|+..++.++|++|+++++++..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------------- 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED----------------- 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec-----------------
Confidence 689999999999998889999999987543321 34678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 469 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 469 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+++|||++ ++|.+++... ..++...++.++.+++.+|++||+.|++|+||+
T Consensus 63 -----------------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 63 -----------------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred -----------------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 256799999998 6999998766 578999999999999999999999999999999
Q ss_pred cCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHH
Q 000993 547 PNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625 (1196)
Q Consensus 547 p~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviL 625 (1196)
|.||+++. ++.++|+|||.+........ ......+...|++||.+.....++.++|+|++|+++
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~ 184 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKS---------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcc---------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence 99999999 89999999999976432210 122346788999999988733688999999999999
Q ss_pred HHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 626 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 626 yELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++| ..+.+++.+|++.||.+||++.++++++
T Consensus 185 ~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 185 YEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 999 4788899999999999999999999763
No 427
>PRK04173 glycyl-tRNA synthetase; Provisional
Probab=99.94 E-value=5.7e-26 Score=271.07 Aligned_cols=323 Identities=15% Similarity=0.127 Sum_probs=225.5
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHH--cCCccccccce------eecCCCcccccceEEEe--------e-------
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQ--HCAKHLEIEPM------YLLGDCPQFKRNTVKLL--------T------- 797 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~--~Gy~~I~tP~~------~~~~~~~~~~~~my~f~--------D------- 797 (1196)
..|+.||+|..+.+++.|++.|++.|.. +||.+|.||++ ..++|.+.+.+.||... |
T Consensus 27 ~~g~~d~~P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~~ 106 (456)
T PRK04173 27 LAGFWDYGPLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEELG 106 (456)
T ss_pred hhcccccChhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHHh
Confidence 5799999999999999999999999987 89999999999 33455666667777653 1
Q ss_pred ------------------------------------------------cCCceEeecCCCcH----HHHHHHHhCC-CCc
Q 000993 798 ------------------------------------------------HGGDLLELSHELRL----PFIRWAISNQ-KSS 824 (1196)
Q Consensus 798 ------------------------------------------------~~G~~laLRPD~T~----~iaR~~a~~~-~~P 824 (1196)
.++..+.||||..- .+.+.+-+++ .+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dLP 186 (456)
T PRK04173 107 IDAEGLSNEELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKLP 186 (456)
T ss_pred hhhccccHHHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccCC
Confidence 11234567886553 2445555566 789
Q ss_pred eeEEEecCeeecCCCCC----CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHH
Q 000993 825 FKRYEISSVYRRAIGHS----PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSW 898 (1196)
Q Consensus 825 ~r~~Y~G~VfR~e~~~~----~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~ 898 (1196)
+|++++|+|||+|.... |.|||+|.++++|+.++...+ ..+|.++.++|..+|+..
T Consensus 187 lr~aq~g~~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~------------------ 248 (456)
T PRK04173 187 FGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDP------------------ 248 (456)
T ss_pred eeeeEEchhHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCc------------------
Confidence 99999999999986432 456799999999998875422 133333333333333331
Q ss_pred cCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChH
Q 000993 899 AGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKP 978 (1196)
Q Consensus 899 lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~ 978 (1196)
T Consensus 249 -------------------------------------------------------------------------------- 248 (456)
T PRK04173 249 -------------------------------------------------------------------------------- 248 (456)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC-CCccccccccccccccccchhhh--hccccccccc
Q 000993 979 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE-KYPATLVEGTLLAVGGRYDYLLH--RMWDREYVGY 1055 (1196)
Q Consensus 979 ~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~-~~~~~~~~~~~I~~GGRYD~L~~--~fg~~~~~~~ 1055 (1196)
.++.++....++++||++.+|++.+... +. ......++++||+|| |.. .|++.. +.+
T Consensus 249 ----------------~~~~~s~~~~~e~~~ys~~~wd~e~~~~~g~--~~~e~~g~~~~~dyd-L~~~~~~s~~d-l~y 308 (456)
T PRK04173 249 ----------------ENLRFREHLPEELAHYSKATWDIEYKFPFGR--FWGELEGIANRTDYD-LSRHSKHSGED-LSY 308 (456)
T ss_pred ----------------cceEEEecCcchhhccHHHHHhHHHhCCCCC--cEEEEeeeeccchhh-cccchhhcCCC-eEE
Confidence 2355555555556666666655533210 00 001112578899999 653 343322 121
Q ss_pred c----CCCCCCC-cceecccHHHH-HhhccCCC--------------CCCCCCCCceEEEEEcCCC-chHHHHHHHHHHH
Q 000993 1056 A----SRTNPPS-GVGASLALETI-IQHYPVDF--------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAEL 1114 (1196)
Q Consensus 1056 ~----g~~~~~p-AvGfaiglerl-~~~L~~~~--------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~L 1114 (1196)
. ++....| .+|+|+|+||| +.+|.++. ..+...+|.+|+|++.++. ....+|.+++++|
T Consensus 309 ~~~~~~~~~~~P~vi~~siGieRl~~ail~~~~~~~~~~~~~~r~~l~~P~~lAP~qV~Iipi~~~~e~~~~A~~la~~L 388 (456)
T PRK04173 309 FDDETTGEKYIPYVIEPSAGLDRLLLAFLEDAYTEEELGGGDKRTVLRLPPALAPVKVAVLPLVKKEKLSEKAREIYAEL 388 (456)
T ss_pred EecCCCCceeeeEEEEecccHHHHHHHHHHHHcccccccCCcceeEEECCCcCCCCEEEEEEecCcHHHHHHHHHHHHHH
Confidence 1 1112234 45999999996 44444221 1222357889999998621 3678999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
|++ ++|+++. .+++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.+++.
T Consensus 389 R~~-irVelD~--~~slgkkir~A~~~Gip~~IIIG~~El~~g~VtvR~r~t~eq~~v~l~el~~~l~~~ 455 (456)
T PRK04173 389 RKD-FNVDYDD--SGSIGKRYRRQDEIGTPFCITVDFDTLEDNTVTIRDRDTMEQVRVKIDELKDYLAEK 455 (456)
T ss_pred Hhc-CEEEEeC--CCCHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEEeHHHHHHHHHhh
Confidence 999 9999874 358999999999999999999999999999999999999999999999998888653
No 428
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=1.4e-26 Score=259.43 Aligned_cols=267 Identities=24% Similarity=0.391 Sum_probs=196.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|..+.+||.|.|++||++.+.. .++.||+|.+..... -.++.+|++.|..+ .|.||+++.+|+-
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~r----- 105 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFR----- 105 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhc-----
Confidence 4678899999999999999999987 688999999875433 34688999999999 6999999998872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+.+||||++. ...+++.. ++-.+++.+++.++.||++
T Consensus 106 -----------------------------------nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~ 147 (418)
T KOG1167|consen 106 -----------------------------------NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAH 147 (418)
T ss_pred -----------------------------------cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhh
Confidence 35678999999985 66666654 6688999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhcccccccc---C----CCCC--------------CCCCCcc----
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQ---D----AAFP--------------TDTGGVS---- 588 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~---~----~~~~--------------~~~~~~~---- 588 (1196)
+|.+|||||||||+|+|.+.. +.-.|.|||+|.......... . ...+ ....+..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 999999999999999999865 678899999998432211000 0 0000 0000111
Q ss_pred ----ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHH-HHH------------HHHhhhc
Q 000993 589 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER-QIV------------LSDLKQK 648 (1196)
Q Consensus 589 ----~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~------------~~~l~~~ 648 (1196)
...-...||++|.|||++..++..+.++||||.|||+.-+++ ||....+. ... .+.....
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 112346899999999999998889999999999999999985 77533211 000 0000000
Q ss_pred CC-----------------------------------CCCccccCC-HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 649 GE-----------------------------------LPPSWVAKF-SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 649 ~~-----------------------------------~p~~~~~~~-~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+. .+..+.... ..+.+|+.+||..||.+|.|++++|+|+||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 001112222 257899999999999999999999999999854
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 388 ~ 388 (418)
T KOG1167|consen 388 D 388 (418)
T ss_pred h
Confidence 3
No 429
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.3e-26 Score=298.64 Aligned_cols=198 Identities=25% Similarity=0.401 Sum_probs=141.2
Q ss_pred cEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccc
Q 000993 493 TYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571 (1196)
Q Consensus 493 ~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~ 571 (1196)
..++.+|||++++|.+++.. ...+++.+++.++.||++||+|||++||+||||||+||||+..+.+|++|||++.....
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 45788899999999999975 34699999999999999999999999999999999999997655555555555433211
Q ss_pred cccc--cCCCCC-----------------C-CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcC
Q 000993 572 EQLD--QDAAFP-----------------T-DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 631 (1196)
Q Consensus 572 ~~~~--~~~~~~-----------------~-~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltP 631 (1196)
.... ....+. . ............+||+.|||||++.+ ..|+.++|||||||+||||++|
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhC
Confidence 0000 000000 0 00000111233578999999999987 5689999999999999999987
Q ss_pred CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 632 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 632 f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+.+..........+.. ...|+......+...+++.+||++||.+||++.++++|+|+...
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 212 VSSREEKSRTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCchhhHHHHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 6654433322222221 22333333345677899999999999999999999999999764
No 430
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=4.4e-26 Score=250.72 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=196.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++.....+-+|.||.||.|.|+.. .+.|-+|.++ ...+.-....++.|...+..+.|||+.++.+++++.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 4566777889999999999988743 2346677664 234444567889999999999999999999998653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------CCCCHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 526 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 526 (1196)
....++++.+++ |+|..++... ..++..+...++.
T Consensus 360 ------------------------------------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 360 ------------------------------------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ------------------------------------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 233467778887 7999998732 2377788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
|++.||+|||++||||.||..+|++|++...+||+|=.+++.+-..++. +-+.+......||+||.+
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYh-------------cLGDnEnRPvkWMslEal 470 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYH-------------CLGDNENRPVKWMSLEAL 470 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCccccc-------------ccCCCCCCcccccCHHHH
Confidence 9999999999999999999999999999999999999999876433211 112223346689999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+. ..|+.++|+|||||+||||+| |+..-++.+..... ..+.....+.+++.++..++..||..+|++||+++|
T Consensus 471 ~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 471 QN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 98 689999999999999999996 88877665543322 244444455577789999999999999999999999
Q ss_pred HHh
Q 000993 683 LLQ 685 (1196)
Q Consensus 683 iL~ 685 (1196)
+..
T Consensus 548 lv~ 550 (563)
T KOG1024|consen 548 LVI 550 (563)
T ss_pred HHH
Confidence 875
No 431
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-25 Score=237.09 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=187.3
Q ss_pred CCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeee
Q 000993 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 450 (1196)
Q Consensus 372 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~ 450 (1196)
..++.-.+.+.|.+.+.||+|.||.+.+|+|+.+++.+|+|.+.... ....+|.+|...--.| .|.||+.-|++-+
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 34455566789999999999999999999999999999999887433 3467899998655555 5899998775543
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa 529 (1196)
+ ...+++++||||+ |+|..-+.. ..+-+....+++.|++
T Consensus 92 q---------------------------------------t~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~ 131 (378)
T KOG1345|consen 92 Q---------------------------------------TSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLL 131 (378)
T ss_pred h---------------------------------------cCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHH
Confidence 3 2457889999998 788877655 4588888999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+|+.|+|+.++||||||.+||||-. ...+||||||+++..... -.....+..|.+||...
T Consensus 132 SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------------------V~~~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 132 SAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------------------VKYLEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce------------------ehhhhhhcccCCcHHHh
Confidence 9999999999999999999999943 347999999998753210 11123466799999765
Q ss_pred CC----CCCCCcchhHHHHHHHHHhhc---CCchhHHH-----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 608 GW----PKIDEKADMYSLGIVFFELWH---PFSTAMER-----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 608 ~~----~~~s~ksDVwSlGviLyELlt---Pf~~~~~~-----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
.. -..++.+|+|.|||++|.++| ||....-+ +-.....+.....|..+...++.+..+.++-|.++|+
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 32 225788999999999999997 66533211 1111112223456677777888999999999999999
Q ss_pred CC
Q 000993 676 DR 677 (1196)
Q Consensus 676 ~R 677 (1196)
+|
T Consensus 274 dr 275 (378)
T KOG1345|consen 274 DR 275 (378)
T ss_pred cc
Confidence 99
No 432
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae.
Probab=99.92 E-value=2.4e-24 Score=258.75 Aligned_cols=323 Identities=10% Similarity=0.094 Sum_probs=224.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 807 (1196)
..++|+++|+|.+..+++.|++.+++.++++||++|.||.| ++.. +.+.+.++||.+.|.+ ++.++|||
T Consensus 25 ~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~f~v~~~g~~~~~e~l~LrP 104 (472)
T TIGR00408 25 YPVKGCYVWLPYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKGFEPEVYWITHGGLSKLDEPLALRP 104 (472)
T ss_pred cCCCceEEECcCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhhcchhcEEEecCCCCccCCcEEEeC
Confidence 35799999999999999999999999999999999999999 3332 2444588999999987 48999999
Q ss_pred CCcHHHHHHHHh----CCCCceeEEEecCeeecCCCC----CCCcceeEeEEEE-eCCCCccchH---HHHHHHHHHHH-
Q 000993 808 ELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASALTEA---EVLKVTMDIVT- 874 (1196)
Q Consensus 808 D~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~aDa---EvI~la~~~L~- 874 (1196)
+.|++++.+++. ++..|+|+|++|+|||+|.++ .|.+||+|.+++. +... ..++. +++.+..+++.
T Consensus 105 t~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~~~~-e~a~~e~~~~l~~y~~i~~~ 183 (472)
T TIGR00408 105 TSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAHATA-EEAEEQVLRALDIYKEFIEN 183 (472)
T ss_pred CCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhhCCH-HHHHHHHHHHHHHHHHHHHh
Confidence 999999966554 446799999999999998764 4556799999994 5443 33333 55666677776
Q ss_pred HcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHH
Q 000993 875 RFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 954 (1196)
Q Consensus 875 ~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l 954 (1196)
.||+. +.+... ++ .++
T Consensus 184 ~lglp--~~~~~~--------------~~------------~ek------------------------------------ 199 (472)
T TIGR00408 184 SLAIP--YFVGRK--------------PE------------WEK------------------------------------ 199 (472)
T ss_pred ccCCe--EEEEec--------------Cc------------hhh------------------------------------
Confidence 67774 333110 00 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc
Q 000993 955 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 955 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
+.|. .....++..+.-|-..-.|++|..
T Consensus 200 ---~~ga--------------------------------~~~~~~e~~~~dgr~~q~~t~~~L----------------- 227 (472)
T TIGR00408 200 ---FAGA--------------------------------EYTWAFETIMPDGRTLQIATSHNL----------------- 227 (472)
T ss_pred ---cCCc--------------------------------cceEEEeEEEcCCCEEEEeeeecc-----------------
Confidence 0000 000111111110111112222211
Q ss_pred ccccccchhhhhccccccccccC-CCCCCCcceecccH-HHHHhhcc------CCCCCCCCCCCceEEEEEc--CC---C
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYAS-RTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSR--GG---G 1101 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g-~~~~~pAvGfaigl-erl~~~L~------~~~~~~~~~~~~~vlv~~~--~~---~ 1101 (1196)
|- ++.++|+-. +.+ .++.....-+++|+ +|++.+|. .+...+...+|.+|+|+++ +. +
T Consensus 228 --g~---~~sk~f~i~----y~~~~g~~~~~h~~s~Gi~eRli~~lie~~~d~~gl~~P~~iaP~qV~Iipi~~~~~~~~ 298 (472)
T TIGR00408 228 --GQ---NFAKTFEIK----FETPTGDKEYAYQTSYGISTRVIGALIAIHSDEKGLVLPPRVAPIQVVIIPIIFKKKENE 298 (472)
T ss_pred --cc---cccHhcCCE----EECCCCCEEeeEEccccHHHHHHHHHHHHhCCCCceeeChhhCcceEEEEEccCCCCCCH
Confidence 00 112222211 111 11122333477777 99988873 2222233457789999996 31 2
Q ss_pred chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1102 GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1102 ~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
....+|.++++.||+.|++|+++.. +.++++++++|+++|+|++|+||++|+++|+|+||++++++|..++++++++.+
T Consensus 299 ~~~~~A~~l~~~Lr~~girv~lD~r-~~s~gkk~k~Ae~~GvP~~IiIG~~Ele~~~V~ik~rdt~eq~~v~l~el~~~l 377 (472)
T TIGR00408 299 KVMEAAREVRSRLKKAGFRVHIDDR-DNRPGRKFYQWEIKGIPLRIEVGPNDIEKNIAVISRRDTGEKYQVSLDQLEERV 377 (472)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECcchhhCCeEEEEECCCCceEEEEHHHHHHHH
Confidence 4678899999999999999998876 459999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhh
Q 000993 1182 LDAIASQ 1188 (1196)
Q Consensus 1182 ~~~l~~~ 1188 (1196)
.+.++..
T Consensus 378 ~~~l~~~ 384 (472)
T TIGR00408 378 VELLNNI 384 (472)
T ss_pred HHHHHHH
Confidence 7776644
No 433
>PLN02837 threonine-tRNA ligase
Probab=99.92 E-value=8.6e-24 Score=261.62 Aligned_cols=353 Identities=15% Similarity=0.138 Sum_probs=248.3
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
...|+..|+|..+.+++.+++.+++...++||++|.||.+ ..+++++.+.++||++.|..++.++||| +++|.
T Consensus 235 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p-~~~p~ 313 (614)
T PLN02837 235 AGGGLVFWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRP-MNCPY 313 (614)
T ss_pred cCCcceEEechHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECC-CCcHH
Confidence 4679999999999999999999999999999999999999 3345577889999999998889999999 66665
Q ss_pred -HHHHHh----CCCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 814 -IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 814 -aR~~a~----~~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
+-++.. ++..|+|++.+|+|||+|..+ -|.++|+|.++++|+.++...+ .+++.+..++++.||+..
T Consensus 314 ~~~~~~~~~~SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~- 392 (614)
T PLN02837 314 HILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSK- 392 (614)
T ss_pred HHHHHhCccCChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 445443 224699999999999998742 2556799999999998866333 378999999999999974
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.++.+. -+.+|-++.|...-..+-.. +...++.-...+.-.+|
T Consensus 393 ~~~~~~t~~-----~~~~g~~~~w~~~~~~l~~~----------------------l~~~~~~~~~~~g~~af------- 438 (614)
T PLN02837 393 YEINLSTRP-----EKSVGSDDIWEKATTALRDA----------------------LDDKGWEYKVDEGGGAF------- 438 (614)
T ss_pred EEEEecCCc-----hhccCCHHHHHHHHHHHHHH----------------------HHHcCCCceeCCCcccc-------
Confidence 888888753 13456555443322221111 11112111100001111
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
+| .++.+-+...-|..+-.|++--.+. -+-|||
T Consensus 439 -----------------------------yg--pkid~~~~d~~gr~~q~~tiqldf~----------------~~~~f~ 471 (614)
T PLN02837 439 -----------------------------YG--PKIDLKIEDALGRKWQCSTIQVDFN----------------LPERFD 471 (614)
T ss_pred -----------------------------cC--cceeeEeeccCCceeeecceeEeec----------------chhhcC
Confidence 11 1222222222244444444421111 122333
Q ss_pred hhhhhccccccccccCCCCCCC-cceecc--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPS-GVGASL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~p-AvGfai--glerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
-- | ...-|... .| -+.-++ ++||++.+|.+ +..+. ..+|.+|+|++.+ +....+|.+++++||
T Consensus 472 l~---y-----~~~d~~~~-~pv~ih~~~~G~~eRlia~Lie~~~g~~P~-~laP~qV~IIpi~-~~~~~~A~~Ia~~Lr 540 (614)
T PLN02837 472 IT---Y-----VDSNSEKK-RPIMIHRAILGSLERFFGVLIEHYAGDFPL-WLAPVQARVLPVT-DNELEYCKEVVAKLK 540 (614)
T ss_pred cE---E-----ECCCCCcc-CCEEEEcCCccCHHHHHHHHHHHcCCCCCC-CCCCccEEEEEeC-hHHHHHHHHHHHHHH
Confidence 11 1 11222221 12 222222 59999988763 33333 3478899999986 667899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
+.|++|++ .. ++++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|++.+++.
T Consensus 541 ~~GirVev-~~-~~slgkkir~A~~~gip~~IiIG~~E~e~~~VtVr~r~~geq~~v~~~el~~~l~~~~~~~ 611 (614)
T PLN02837 541 AKGIRAEV-CH-GERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDFINRIQLAVENR 611 (614)
T ss_pred HCCCEEEE-eC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCEEEEEECCCCceeEeeHHHHHHHHHHHHhhc
Confidence 99999998 44 5799999999999999999999999999999999999999999999999999999888754
No 434
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=7.7e-24 Score=229.06 Aligned_cols=209 Identities=33% Similarity=0.569 Sum_probs=171.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++.+..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----------- 68 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED----------- 68 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec-----------
Confidence 56788999999999999999988999999998754332 245688899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~-l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....++++||+++ +|.+++..... +++..++.++.+++.++.|||++++
T Consensus 69 -----------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 69 -----------------------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred -----------------------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 2467899999986 99999987766 8999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||+|.||+++.++.++|+|||++........ .......++..|++||.+.+...++.++|+||
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~ 185 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS 185 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--------------ccccceeccCCcCCHhHhcCCCCCCchhhHHH
Confidence 9999999999999999999999999986532210 01233567889999999843356788999999
Q ss_pred HHHHHHHhhc---CCch-hHHHHHHHHHhh
Q 000993 621 LGIVFFELWH---PFST-AMERQIVLSDLK 646 (1196)
Q Consensus 621 lGviLyELlt---Pf~~-~~~~~~~~~~l~ 646 (1196)
||+++|+|++ ||.. ..+.....+.+.
T Consensus 186 lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 186 LGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 9999999996 8866 344444444444
No 435
>PRK08661 prolyl-tRNA synthetase; Provisional
Probab=99.91 E-value=3.5e-23 Score=249.39 Aligned_cols=324 Identities=12% Similarity=0.104 Sum_probs=224.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecC----CceEeecCCC
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GDLLELSHEL 809 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~~laLRPD~ 809 (1196)
++|+.+|+|..+.+++.|++.+++.|+++||++|.||.| ++. ++.+.+.++||.+.+.+ ++.++|||+.
T Consensus 33 v~G~~~~~P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPts 112 (477)
T PRK08661 33 VKGCMVIKPYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTS 112 (477)
T ss_pred CCceEEECccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCC
Confidence 679999999999999999999999999999999999999 332 33555689999999877 5689999999
Q ss_pred ----cHHHHHHHHhCCCCceeEEEecCeeecCCCCC---CCcceeEeEEEEeCCCCccchH---HHHHHHHHHH-HHcCC
Q 000993 810 ----RLPFIRWAISNQKSSFKRYEISSVYRRAIGHS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIV-TRFFH 878 (1196)
Q Consensus 810 ----T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~---~~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L-~~lgi 878 (1196)
|..++|.+.+++.+|+|+|++|+|||+|.... |.+||+|.+.+.+-.....++. +++.+..+++ +.||+
T Consensus 113 E~~i~~~~~~~i~SyrdLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~~eea~~e~~~~l~~y~~i~~~~Lgl 192 (477)
T PRK08661 113 ETIIYPMYKKWIQSYRDLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHATEEEAEEETLEMLEIYKEFFEDYLAI 192 (477)
T ss_pred cHHHHHHHHhhhcchhhcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77888888777778999999999999976543 5567999999986444344444 4455556666 55665
Q ss_pred CCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Q 000993 879 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 958 (1196)
Q Consensus 879 ~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 958 (1196)
. +.+..- ++ + + + +
T Consensus 193 p--~~~~~~--------------~~-~-----------e---------k--------------------------f---- 205 (477)
T PRK08661 193 P--VIIGKK--------------TE-W-----------E---------K--------------------------F---- 205 (477)
T ss_pred e--EEEEec--------------Ch-H-----------H---------h--------------------------h----
Confidence 3 222110 00 0 0 0 0
Q ss_pred cCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 959 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 959 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
.|. ...+.+|..+..|...-.|++|..- -
T Consensus 206 ~ga--------------------------------~~~~~ie~~~~dgr~~q~gt~~~Lg-------------------~ 234 (477)
T PRK08661 206 AGA--------------------------------DYTYTIEAMMPDGKALQAGTSHYLG-------------------Q 234 (477)
T ss_pred CCC--------------------------------cceeEEEEEeCCCCEEEEEEecccc-------------------c
Confidence 010 0012222222212222233333110 0
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccH-HHHHhhccC------CCCCCCCCCCceEEEEEcC-----CCchHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYPV------DFKPVRNEAGTSVLVCSRG-----GGGLLVE 1106 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erl~~~L~~------~~~~~~~~~~~~vlv~~~~-----~~~~~~~ 1106 (1196)
++.++|+-. +...-|... .+ .=.++|+ +|++.+|.. +...+...+|.+|+|++.. .+....+
T Consensus 235 ---~~s~~f~i~-y~d~~g~~~-~v-~~~s~G~~~R~i~alie~~~D~~Gl~lP~~iAP~qV~Iipi~~~~~~~~~~~~~ 308 (477)
T PRK08661 235 ---NFAKAFDIK-FQDKDGKLE-YV-HQTSWGVSTRLIGALIMTHGDDKGLVLPPKIAPIQVVIVPIFKKEEKKEEVLEY 308 (477)
T ss_pred ---chhHhcCCE-EECCCCCEe-ee-EEecccHHHHHHHHHHHHhCccCCCccCcccCCCeEEEEEecCCCcCCHHHHHH
Confidence 122222211 001111111 12 2224554 999887751 2222233567899999982 1456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|.++++.||+.|++|+++...+.++++++++|+++|+|++|+||++|+++|+|+|+++++|++..++++++++.+++.++
T Consensus 309 a~~l~~~Lr~~GirV~lD~r~~~s~gkK~~~ae~~GvP~~IiIG~~ele~~~V~ik~rdtgek~~v~~~el~~~l~~~l~ 388 (477)
T PRK08661 309 AKELAEELKKAGIRVKLDDRSDKTPGWKFNEWELKGVPLRIEIGPRDLENNTVVLVRRDTLEKETVPLDELVEKVPELLE 388 (477)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECcchhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHH
Confidence 99999999999999998874468999999999999999999999999999999999999999999999999998877765
Q ss_pred hh
Q 000993 1187 SQ 1188 (1196)
Q Consensus 1187 ~~ 1188 (1196)
.+
T Consensus 389 ~~ 390 (477)
T PRK08661 389 EI 390 (477)
T ss_pred HH
Confidence 44
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.90 E-value=1.1e-24 Score=251.08 Aligned_cols=298 Identities=37% Similarity=0.658 Sum_probs=223.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+++.++|+....+|.|+||+|+.+..+.++..+|||.|..+... ....+.++|+..+..+.|++|+++.++|.+....
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~ 122 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPL 122 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCC
Confidence 688999999999999999999999999988989999998876543 3456788999999999999999999999876541
Q ss_pred ccCC---------C------C---c--------------CCC----------Ccccccccccccc---------------
Q 000993 456 DFDG---------D------S---M--------------WGS----------GTLASSTFSNRAA--------------- 478 (1196)
Q Consensus 456 ~~~~---------~------~---~--------------~~~----------g~~~~~~~~~~~~--------------- 478 (1196)
.+-. + . + +.+ -..+....+....
T Consensus 123 ~~qe~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~ 202 (516)
T KOG1033|consen 123 GWQEEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSE 202 (516)
T ss_pred cccchhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhh
Confidence 0000 0 0 0 000 0000000000000
Q ss_pred ------------------------------------------------ccccc---------------------------
Q 000993 479 ------------------------------------------------SSADV--------------------------- 483 (1196)
Q Consensus 479 ------------------------------------------------~~~~v--------------------------- 483 (1196)
+...+
T Consensus 203 ~rk~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~ 282 (516)
T KOG1033|consen 203 FRKTSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV 282 (516)
T ss_pred hhhhhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhc
Confidence 00000
Q ss_pred -------------------------------------ccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHH
Q 000993 484 -------------------------------------TGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAW 522 (1196)
Q Consensus 484 -------------------------------------~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~ 522 (1196)
.-........++||+|++|. .+|.+++.... ..+.....
T Consensus 283 d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~ 362 (516)
T KOG1033|consen 283 DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLML 362 (516)
T ss_pred cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHH
Confidence 00000001236899999997 69999997544 36667888
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
.++.|++.|+.| ++.+|||+||.||+...+..+||+|||+......... .......++..+||.+||+
T Consensus 363 ~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~---------~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET---------VAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred HHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc---------ccchhhhhhhcccccccCC
Confidence 999999999999 9999999999999999999999999999876432220 0111234677899999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
||++.+ ..|+.++||||||+||+|++++|....++...+..++ .+.+||.+....|....|+.+|+.+.|.+||++.+
T Consensus 431 PEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r-~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 431 PEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR-DGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh-cCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 999999 6899999999999999999999999999888888777 67788766666778889999999999999997766
Q ss_pred HHhccC
Q 000993 683 LLQDAL 688 (1196)
Q Consensus 683 iL~~~~ 688 (1196)
.-.|.|
T Consensus 509 ~~~~~~ 514 (516)
T KOG1033|consen 509 VALHEF 514 (516)
T ss_pred Hhhhhh
Confidence 665554
No 437
>PRK03991 threonyl-tRNA synthetase; Validated
Probab=99.90 E-value=6.5e-22 Score=242.69 Aligned_cols=347 Identities=13% Similarity=0.112 Sum_probs=237.8
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|..-|+|..+.+++.|++.+++.+.++||.+|.||.+ ...++.+.+.++||.+ +.+++.++|||.-+.+..
T Consensus 216 ~~G~~~~~P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v-~~~~e~l~Lrp~~c~~~~ 294 (613)
T PRK03991 216 DVGHMRYYPKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRV-KSDKKDLMLRFAACFGQF 294 (613)
T ss_pred CeeeEEEEcHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEe-cCCCceEEEecCCCHHHH
Confidence 468889999999999999999999999999999999998 3344567778999987 445789999996666666
Q ss_pred HHHHh----CCCCceeEEEecC-eeecCCCCC-----CCcceeEeEEEEeCCC-Cccch--HHHHHHHHHHHHHcCCCCc
Q 000993 815 RWAIS----NQKSSFKRYEISS-VYRRAIGHS-----PPNRYLQGDFDIIGGA-SALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~-VfR~e~~~~-----~~~ef~Q~GvEiiG~~-~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
.++.. ++..|+|+|.+|+ +||+|.++. |.++|+|.++++|+.+ +...+ .+++.++.++++.||+.
T Consensus 295 ~~~~~~~~SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~~eqa~~e~~~~l~~~~~i~~~lGl~-- 372 (613)
T PRK03991 295 LMLKDMTISYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMEQAMEEFEKQYEMILETGEDLGRD-- 372 (613)
T ss_pred HHHhCCcCchhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 55544 2346999999999 999987542 5567999999999985 33222 37799999999999995
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.++... .+.+. ..+.+..++.... ++-. +....|.
T Consensus 373 ~~~~~~~t~---df~~~------~~~~l~~~l~~~g-------------------------~~~~--------~~~~~g~ 410 (613)
T PRK03991 373 YEVAIRFTE---DFYEE------NKDWIVELVKREG-------------------------KPVL--------LEILPER 410 (613)
T ss_pred eEEEecCHH---HHhhh------HHHHHHHHHHHcC-------------------------CCEE--------ecccCCc
Confidence 788776531 11110 0111222222211 0000 0000000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
. .-+| .++.|.+...-|-..-.| ++=-|+.|
T Consensus 411 ~--------------------------~~yg--~kie~~~~d~~gr~~q~~--------------------T~qld~~~- 441 (613)
T PRK03991 411 K--------------------------HYWV--LKVEFAFIDSLGRPIENP--------------------TVQIDVEN- 441 (613)
T ss_pred c--------------------------ccCc--CcEEEEEeCCCCCEEEEe--------------------eeecCccc-
Confidence 0 0001 122222221111111122 12223333
Q ss_pred hhhhhccccccccccCCCCCCC-cceec-cc-HHHHHhhccCCCC----------CCCCCCCceEEEEEcCCCchHHHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPS-GVGAS-LA-LETIIQHYPVDFK----------PVRNEAGTSVLVCSRGGGGLLVERM 1108 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~p-AvGfa-ig-lerl~~~L~~~~~----------~~~~~~~~~vlv~~~~~~~~~~~a~ 1108 (1196)
.++|+-. +...-|... .| -+|.+ +| ++|++.+|.+... .+...+|.+|+|++.+ +....+|.
T Consensus 442 --~~~f~l~-y~d~~g~~~-~Pviih~~~~GsieR~i~aliE~~~~~~~~g~gl~~P~~lAP~qV~IIpi~-e~~~~~A~ 516 (613)
T PRK03991 442 --AERFGIK-YVDENGEEK-YPIILHCSPTGSIERVIYALLEKAAKEEEEGKVPMLPTWLSPTQVRVIPVS-ERHLDYAE 516 (613)
T ss_pred --chhCCCE-EECCCCCEe-eCEEEEECCEeHHHHHHHHHHHHhCCccccCceeEcCccccCceEEEEEeC-HHHHHHHH
Confidence 2344321 112223322 34 34654 65 9999888752111 2233578899999996 77889999
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1109 ELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1109 ~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++++.||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|++.++.
T Consensus 517 eIa~~Lr~~GirV~lDdr-~~slgkKir~A~~~GiP~iIVIG~kEle~g~VtVr~R~t~eq~~v~l~eli~~l~~~~~~ 594 (613)
T PRK03991 517 EVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWIPYVVVIGDKEMESGKLTVTIREESEKVEMTLEELIERIKEETKG 594 (613)
T ss_pred HHHHHHHhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhc
Confidence 999999999999998876 679999999999999999999999999999999999999999999999999999888763
No 438
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=3.5e-23 Score=217.14 Aligned_cols=157 Identities=25% Similarity=0.366 Sum_probs=121.3
Q ss_pred CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCC
Q 000993 504 RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582 (1196)
Q Consensus 504 gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 582 (1196)
|+|.+++... ..+++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6789999864 46999999999999999999999998 999999999999999 999875421
Q ss_pred CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh-cCCC-C---Cc
Q 000993 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGEL-P---PS 654 (1196)
Q Consensus 583 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~-~~~~-p---~~ 654 (1196)
....||+.|||||++.+ ..|+.++|||||||++|||++ ||............+.. .... + +.
T Consensus 62 ---------~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 62 ---------EQSRVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ---------ccCCCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 11268999999999988 578999999999999999997 77544332222222211 1111 1 11
Q ss_pred cccCCH--HHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 655 WVAKFS--EQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 655 ~~~~~~--~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
...... ++.++|++||..||.+||++.++++|+|.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 111222 58999999999999999999999999754
No 439
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=1.1e-21 Score=235.67 Aligned_cols=356 Identities=16% Similarity=0.174 Sum_probs=253.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
....|+..|+|..+.+++.+++.++.....+||++|.||.+ ..+++++.+.+.||.+... +++++|||.-++.
T Consensus 207 ~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~~-~~~~~lKpmNCpg 285 (589)
T COG0441 207 EEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTESD-DREYALKPMNCPG 285 (589)
T ss_pred ccCCcceEECCCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeeccC-ChhheeeeccCHh
Confidence 57889999999999999999999999999999999999999 3445677789999977544 5999999944444
Q ss_pred HHHHHHh----CCCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAIS----NQKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
-+.++.+ ++..|+|++..|.|||+|..+ + +.|.|+|-+++||+..++..| .+++.++..+++.+|+++
T Consensus 286 h~~ifk~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~- 364 (589)
T COG0441 286 HILIFKSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTD- 364 (589)
T ss_pred HHHHHhcCCcceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCce-
Confidence 4455544 234699999999999998865 2 555699999999999777555 489999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
|.+.++.+. +.+|.++.|-.+...+...++ ..++.-...+.-.+ +.|+
T Consensus 365 y~~~ls~r~------k~ig~d~~W~~a~~~l~~al~----------------------~~~~~~~~~~G~~a----FyGP 412 (589)
T COG0441 365 YEVKLSTRP------KFIGSDEMWDKAEAALREALK----------------------EIGVEYVEEPGEGA----FYGP 412 (589)
T ss_pred EEEEEecCC------cccCChhhhHHHHHHHHHHHH----------------------hhCceeeecCCceE----EECc
Confidence 999999876 455666655443322222211 11111000000111 1222
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
++.|-+...-|-..-.|+|.--|.. .-|+|
T Consensus 413 ----------------------------------Kid~~v~Dalgr~~q~~TIQlDf~l----------------peRF~ 442 (589)
T COG0441 413 ----------------------------------KIDFQVKDALGREWQLGTIQLDFNL----------------PERFD 442 (589)
T ss_pred ----------------------------------ccceEEEeccCcceecceEEEecCC----------------hhhce
Confidence 1222111122223334444322211 11111
Q ss_pred hhhhhccccccccccCC-CCCCCcceeccc--HHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1042 YLLHRMWDREYVGYASR-TNPPSGVGASLA--LETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~-~~~~pAvGfaig--lerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
-. +++.-|. ++++ -+.-|+. +||.+.+|.+ +..+.+ .+|++|.|++++ ++...+|.++++.|+
T Consensus 443 -------l~-Yv~~d~~~~~Pv-miHrai~GSiERfi~iLiE~~~G~~P~W-LaPvQv~VipV~-~~~~~ya~~v~~~L~ 511 (589)
T COG0441 443 -------LE-YVDEDGEKKRPV-IIHRAILGSIERFIGILLEHYAGALPTW-LAPVQVRVIPVA-DEHLDYAKEVAEKLR 511 (589)
T ss_pred -------EE-EEcCCCCccCCE-EEEeccchhHHHHHHHHHHhccCCCccc-CCccEEEEEEeC-hHHHHHHHHHHHHHH
Confidence 00 0111111 2222 3444444 8999888763 333333 578999999996 777899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhcc
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1190 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~~~ 1190 (1196)
++|++|+++.. +.+++++++.|....+|++|++|++|.++++|++|...++++..+++++++..+++.+++...
T Consensus 512 ~~giRvdvD~~-~e~l~kKIR~a~~~kipyiiVvG~kE~e~~~v~vR~r~~~~~~~~~l~e~i~~ik~e~~~~~~ 585 (589)
T COG0441 512 KAGIRVDIDDR-NEKLGKKIREAGTQKIPYVIVVGDKEVETGTVVVRRRGGKQQKSMTLEELVEELKKEIEGRPN 585 (589)
T ss_pred HcCCeeeeccc-ccchHHHHHHHHhcCCCEEEEEchhhhccCceEEEEccCCccccccHHHHHHHHHHHhhcccC
Confidence 99999998887 779999999999999999999999999999999999999999999999999999998875543
No 440
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=3.8e-22 Score=231.39 Aligned_cols=175 Identities=19% Similarity=0.122 Sum_probs=129.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....++|.+.+.||+|+||+||+|+++. +++.||||++..... .......+.+|+.+|+.++|+||++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3456789999999999999999999886 688889998753211 122345689999999999999998643211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...|+|||||+| +|. .+.. .. ...++.|+++|
T Consensus 91 ----------------------------------------~~~~LVmE~~~G~~L~-~~~~---~~---~~~~~~~i~~a 123 (365)
T PRK09188 91 ----------------------------------------GKDGLVRGWTEGVPLH-LARP---HG---DPAWFRSAHRA 123 (365)
T ss_pred ----------------------------------------CCcEEEEEccCCCCHH-HhCc---cc---hHHHHHHHHHH
Confidence 125899999976 675 2221 11 14678999999
Q ss_pred HHHHHhCCCcccCC-CcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDL-Kp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+|||| ||+|||++.++.+||+|||+|+.+......... ....+-++.++++.|+|||.+..
T Consensus 124 L~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~-------~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 124 LRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRI-------AAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhh-------hhhhhhhhhhccCccCCcccCCh
Confidence 99999999999999 999999999999999999999876432100000 00012246688999999998865
No 441
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=4.3e-20 Score=207.59 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=193.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCC-CeeeeeeeeeecCccccCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~Hp-nIV~l~~~~~e~~~~~~~~~ 460 (1196)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +|++++..+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--------- 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--------- 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec---------
Confidence 778899999999999999987 8899999876554433 567899999999999988 79999987622
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+++++|+.+ ++.+++.... .+....+..++.|++.++.|+|
T Consensus 70 -------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 70 -------------------------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2237999999975 7777776654 7999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s 613 (1196)
+.+++|||+||+||+++..+ .++++|||+++........... ........||..|+|||.+.+. ..+.
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~~t~~~~~pe~~~~~~~~~~~ 189 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI---------PALPSTSVGTPGYMAPEVLLGLSLAYAS 189 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc---------cccccccccccccCCHHHhcCCCCCCCC
Confidence 99999999999999999988 7999999999854322110000 0123567899999999999874 4688
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcC-C-CCCccccC-----CHHHHHHHHHcccCCCCCCCCH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-E-LPPSWVAK-----FSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~-~-~p~~~~~~-----~~~l~~LI~~cL~~dP~~RPta 680 (1196)
...|+||+|++++++++ ||..... .......+.... . ........ ...+.+++.+|+..+|..|.+.
T Consensus 190 ~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 269 (384)
T COG0515 190 SSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269 (384)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCH
Confidence 99999999999999885 6655442 222222222221 1 11111111 1367899999999999999999
Q ss_pred HHHHhcc
Q 000993 681 TELLQDA 687 (1196)
Q Consensus 681 ~eiL~~~ 687 (1196)
.....+.
T Consensus 270 ~~~~~~~ 276 (384)
T COG0515 270 SSDLSHD 276 (384)
T ss_pred HHHhhch
Confidence 9888763
No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=2.1e-22 Score=247.80 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=190.9
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
....+|.|++|.|+.+......+.++.|..+.+ ..+.. ....+..|+.+-..+.|||++..+..+.+.
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-------- 393 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-------- 393 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--------
Confidence 457899999998888888777777777765532 11111 222366788888889999997765443221
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+-.||||+++|..++.....+...++..++.|++.|+.|||+.||
T Consensus 394 --------------------------------~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 394 --------------------------------DGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred --------------------------------ccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 112223999999999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
.||||||+|+++..+|.+||+|||.+.....+. ........+.+|+..|+|||++.+...-...+||||
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~-----------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS 510 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPW-----------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWS 510 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCc-----------chhhhhhcCcccCCcCcCcccccccccCcchhhhhh
Confidence 999999999999999999999999997653221 111133466799999999999998443346799999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--C----CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE--L----PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~----p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.||+++.|.+ ||.................. . ...+...+.+.+.+|.+||++||.+|.|+++|++++|++.
T Consensus 511 ~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 511 CGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 9999999986 66544332221111110100 0 1122333446789999999999999999999999999998
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
....
T Consensus 591 i~~c 594 (601)
T KOG0590|consen 591 IECC 594 (601)
T ss_pred cceE
Confidence 7543
No 443
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=6.1e-21 Score=207.25 Aligned_cols=202 Identities=22% Similarity=0.354 Sum_probs=168.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.|++.++||+|+||+.+.|++..++++||||.-..+.. ..++..|....+.| ..++|..+| +|=
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vY-YFG--------- 93 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVY-YFG--------- 93 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCcee-eec---------
Confidence 479999999999999999999999999999997654433 34577788888888 568888876 221
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..+-.+|||+.+.||.|++.-. .+|+...+..++.|++.-++|+|++
T Consensus 94 ------------------------------qeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 94 ------------------------------QEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred ------------------------------cccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 223455799999999999999854 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
.+|+|||||+|+||...+ .+.|+|||+|+.+..+...+...+ +.+.+..||.+||+--...| .+.+
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY--------rE~KSLsGTARYMSINTHlG-rEQS 214 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY--------REHKSLSGTARYMSINTHLG-REQS 214 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc--------ccccccccceeeeEeecccc-chhh
Confidence 999999999999997654 489999999999877765555443 45678899999999998888 5789
Q ss_pred CcchhHHHHHHHHHhhc---CCchh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTA 635 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~ 635 (1196)
...|+-|||.++++.+. ||.+.
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccc
Confidence 99999999999888884 77654
No 444
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.9e-22 Score=234.12 Aligned_cols=243 Identities=28% Similarity=0.413 Sum_probs=196.6
Q ss_pred eeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.+|.|+||.|++++.. ..|..||+|+.+..............|-.++..++ ||.+|+++.+|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-------------- 66 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-------------- 66 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee--------------
Confidence 3799999999877643 45778999998765433333335556777888886 99999998776
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
+....+|++++|.. |.|...+.....+++.....+...++.+++++|+.+|+|
T Consensus 67 --------------------------qt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiy 120 (612)
T KOG0603|consen 67 --------------------------QTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAY 120 (612)
T ss_pred --------------------------ccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 23556789999996 588888888889999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
||+|++||+++.+|++++.|||+++..-.. +..|||..|||||++.+ ...++|+||||
T Consensus 121 rd~k~enilld~~Ghi~~tdfglske~v~~-------------------~~~cgt~eymApEI~~g---h~~a~D~ws~g 178 (612)
T KOG0603|consen 121 RDYKLENVLLLLEGHIKLTDFGLSKEAVKE-------------------KIACGTYEYRAPEIING---HLSAADWWSFG 178 (612)
T ss_pred hcccccceeecccCccccCCchhhhHhHhh-------------------hhcccchhhhhhHhhhc---cCCcccchhhh
Confidence 999999999999999999999999865322 22399999999999985 58899999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
++++||+| ||.. +....++..+...|.. .++.+++++..++..+|..|.. ..++++|+++.+..+
T Consensus 179 vl~felltg~~pf~~----~~~~~Il~~~~~~p~~---l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 179 VLAFELLTGTLPFGG----DTMKRILKAELEMPRE---LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred hhHHHHhhCCCCCch----HHHHHHhhhccCCchh---hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 99999997 8877 3344444444444443 4568899999999999999975 588999999999988
Q ss_pred HHHHH
Q 000993 695 ELLDN 699 (1196)
Q Consensus 695 ~~~~~ 699 (1196)
+-+..
T Consensus 252 ~~l~~ 256 (612)
T KOG0603|consen 252 NELEA 256 (612)
T ss_pred hhHhh
Confidence 75533
No 445
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=3.8e-20 Score=193.28 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=189.4
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecC
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 453 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~ 453 (1196)
+.-...+.|.++++||.|+||.+|+|.+..+|..||||+-+.+.. ..++..|..+.+.|+| ..|..+..+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~---- 80 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYG---- 80 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhc----
Confidence 334456899999999999999999999999999999997653322 2357789999999976 4455544332
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
.+..+-.+||+..+.+|.+++.- ...|+...++.++-|++.-+
T Consensus 81 ------------------------------------~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~Ri 124 (341)
T KOG1163|consen 81 ------------------------------------TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRI 124 (341)
T ss_pred ------------------------------------cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHH
Confidence 12445689999999999999974 45699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+.......... .+..+...||.+|++--+..+
T Consensus 125 EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIp--------yre~r~ltGTaRYASinAh~g- 195 (341)
T KOG1163|consen 125 EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIP--------YREDRNLTGTARYASINAHLG- 195 (341)
T ss_pred HHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCc--------cccCCccceeeeehhhhhhhh-
Confidence 99999999999999999999654 348899999999876543322222 233466789999999988887
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~--~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
-..+...|+-|+|.+|..+.. ||.+... .+...++...+-..|. -....+.++...+.-|=..-=.+-|...
T Consensus 196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 457889999999988877753 8876543 3333333333333333 1233445777788888776666667654
Q ss_pred HH
Q 000993 682 EL 683 (1196)
Q Consensus 682 ei 683 (1196)
-+
T Consensus 276 yl 277 (341)
T KOG1163|consen 276 YL 277 (341)
T ss_pred HH
Confidence 44
No 446
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-19 Score=209.90 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=183.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC----CCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQH----QHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H----pnIV~l~~~~~e~~~~~ 456 (1196)
.|.+.++||+|+||.||+|.+..++ ..+|+|.......... . .+..|..++..+.+ +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEecc------
Confidence 8999999999999999999998664 6788888765332211 1 57778888888863 57777765431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+-||||+.++.+|.++.... +.|+...+..++.|++.+|++
T Consensus 91 ---------------------------------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 91 ---------------------------------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred ---------------------------------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 124567999999999999988544 579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-----CCeEEeccCcchhcc--ccccccCCCCCCCCCCcccc-CcCccccccCCCchhc
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-----NDIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-----~~vKL~DFGlA~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l 606 (1196)
||+.|++||||||+|+++... ..+.|.|||+|+... ...... . ...+. .....||..|+++.+.
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~--~------~~~r~~~~~~rGT~ry~S~~~H 209 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGN--L------RPPRPQKGLFRGTLRYASINVH 209 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcc--c------ccCCCCccCCCCccccccHHHh
Confidence 999999999999999999865 359999999998332 111100 0 00111 2345699999999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHH--HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQI--VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~--~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
.+ ...+.+.|+||++.++.|++. ||........ ..................+.++..+...+-..+...+|...
T Consensus 210 ~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 210 LG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence 98 578999999999999999985 7754432111 11111111111111122234667777777778999999888
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
.+...
T Consensus 289 ~~~~~ 293 (322)
T KOG1164|consen 289 KLAEL 293 (322)
T ss_pred HHHHH
Confidence 87653
No 447
>KOG4018 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=99.82 E-value=2.5e-21 Score=199.01 Aligned_cols=119 Identities=24% Similarity=0.299 Sum_probs=104.5
Q ss_pred CcCCcceEeecCCCCCCCCccc-eeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEee
Q 000993 13 RSKGRAQSKDHSSSTVDDNELL-SEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNL 91 (1196)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl 91 (1196)
++.+..|+|++..+.++++++. ++.|.|++|++|||++|++++...+|+.++++..+++.|+.+|++|| ||+|||||
T Consensus 27 ~~~~~~f~v~iq~e~~e~d~~~~~~~l~~s~tEnYPDe~Pli~~~~~~~~~~~~i~~i~~~l~~~aeenL--GmaMiftL 104 (215)
T KOG4018|consen 27 SEDPPIFEVTIQYEEGENDEPKGSFILVFSLTENYPDEAPLIEAFENENLEDAEIEGILEKLQQEAEENL--GMAMIFTL 104 (215)
T ss_pred ccCCccceeeeecccccCCCccccEEEEEEccCCCCCCCcceeccccccccHHHHHHHHHHHHHHHHHhc--chHHHHHH
Confidence 3445569999999999888887 99999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhhCCCCccc---cCCCCcccccccccccCccccccc
Q 000993 92 VEAAQEFLSEIVPLGQSN---ESVPGLVTESSSQSFEGSAVSASK 133 (1196)
Q Consensus 92 ~~~~~e~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 133 (1196)
||++||||++++.++... +..-...++.+-+.|+|||||.|.
T Consensus 105 vss~ke~l~e~~~q~~~~e~~e~~~~~~ee~e~~kfhgt~VT~es 149 (215)
T KOG4018|consen 105 VSSAKEELNEIVEQQKAAEQREQEAREAEEEERKKFHGTPVTLES 149 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCceehhh
Confidence 999999999999866555 222233366777999999999885
No 448
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=2.5e-20 Score=206.03 Aligned_cols=286 Identities=22% Similarity=0.269 Sum_probs=188.5
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCc-----------------------------------EEEEEEEecCC--
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGR-----------------------------------HYAVKKIRLKD-- 418 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----------------------------------~vAVK~i~~~~-- 418 (1196)
+.-.+++|++...||+|....||.|+...+|. +.|||.+-.-+
T Consensus 152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~ 231 (598)
T KOG4158|consen 152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD 231 (598)
T ss_pred cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence 34457899999999999999999988764221 24566542211
Q ss_pred -CCchhHHHHHHHHH------HH--------Hh--------cCCCCeeeeeeeeeecCccccCCCCcCCCCccccccccc
Q 000993 419 -KSLPVNDRILREVA------TL--------SR--------LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 475 (1196)
Q Consensus 419 -~~~~~~~~~~~Ev~------iL--------~~--------L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~ 475 (1196)
.+....+.+.+|.- .+ +. -.|||||+++++|++....- -.+...++....
T Consensus 232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~l-------Pda~~~YPdalp 304 (598)
T KOG4158|consen 232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVL-------PDAIERYPDALP 304 (598)
T ss_pred CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccC-------CchhhhCccccc
Confidence 11112233333321 11 11 26999999999997643210 001111111111
Q ss_pred ccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC-
Q 000993 476 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA- 554 (1196)
Q Consensus 476 ~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~- 554 (1196)
. --.++.......+|+||.-.+.+|..++..+. .+.....-++.|+++|+.|||.+||.|||||++||||.-
T Consensus 305 ~------R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eld 377 (598)
T KOG4158|consen 305 A------RWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELD 377 (598)
T ss_pred c------eecccccCCCceEEEehhcchhhHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEec
Confidence 0 01122334567899999999999999997654 455667778899999999999999999999999999943
Q ss_pred -CC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-----CCCcchhHHHHHHHH
Q 000993 555 -RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFF 626 (1196)
Q Consensus 555 -~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-----~s~ksDVwSlGviLy 626 (1196)
|+ .+.|+|||.+-.-..... .. .+........|+..-||||+....+. .-.|+|.|+.|.+.|
T Consensus 378 dD~~P~LVvaDFGCcLAd~~hGl----ql-----py~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY 448 (598)
T KOG4158|consen 378 DDEIPQLVVADFGCCLADDNHGL----QL-----PYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY 448 (598)
T ss_pred CCCCcEEEEcccceeeecccccc----cc-----ccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence 32 478999998853221110 01 11112234568889999999765332 235899999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHh
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQ 685 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~ 685 (1196)
|++. ||+..-++...... .+..++|+-...+++.+++|+..+|+.||++|+++ ..+|+
T Consensus 449 EIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 449 EIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 9996 99874443333333 23456777777788999999999999999999984 44554
No 449
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-21 Score=231.35 Aligned_cols=272 Identities=21% Similarity=0.268 Sum_probs=196.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|...+.||.+.|=+|.+|++. .|. |+||++-+.+ .+.+...+-++|++ .+.++|||.+++.-.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~---------- 90 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL---------- 90 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH----------
Confidence 6778899999999999999987 444 9999987654 23334445556666 5667999999876331
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......|+|-+|...+|+|.+..+.-+..-+...|+.||+.||.-+|..|
T Consensus 91 ------------------------------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 91 ------------------------------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred ------------------------------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22455689999999999999998888888999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----------
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---------- 609 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---------- 609 (1196)
|+|+|||.+||||++-..+.|+||..-+....+. .+.+++.+--.+...-.+|.|||.+...
T Consensus 141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe--------DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~ 212 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE--------DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDA 212 (1431)
T ss_pred ccccccccceEEEeeechhhhhcccccCCccCCC--------CCcccceEEEecCCceeeecChHhhhccccccccCCcc
Confidence 9999999999999999999999998765432221 1122222211122233479999986541
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccC--CHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAK--FSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~--~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+..+++.||||+||++.||++ |......- ..-.......+...... ...++++|..|++.||.+|.++++.|
T Consensus 213 ~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL---~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL 289 (1431)
T KOG1240|consen 213 PLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL---LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYL 289 (1431)
T ss_pred cccChhhhhhhhhHHHHHHHhcCCCcccHHHH---HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHH
Confidence 125789999999999999996 33222211 11111111111111110 12678999999999999999999999
Q ss_pred hc---cCCCCchHHHHHHHHHhcCCC
Q 000993 685 QD---ALPPQMEYELLDNILRMMHSS 707 (1196)
Q Consensus 685 ~~---~~~~~~~~~~~~~~~~~~~~~ 707 (1196)
+. .+|+...+.++..++..+...
T Consensus 290 ~~yrG~~FP~yFy~FL~~Y~~~~~~~ 315 (1431)
T KOG1240|consen 290 QKYRGLVFPEYFYSFLYDYLDRFVPL 315 (1431)
T ss_pred HhhhccccHHHHHHHHHHHHHhcCCc
Confidence 87 478888888888887766543
No 450
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain. This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA.
Probab=99.82 E-value=5.9e-20 Score=202.76 Aligned_cols=137 Identities=9% Similarity=0.129 Sum_probs=119.9
Q ss_pred hHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecC----CceEeecCCCcHHHHHHHHhC-
Q 000993 752 TELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHG----GDLLELSHELRLPFIRWAISN- 820 (1196)
Q Consensus 752 a~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~----G~~laLRPD~T~~iaR~~a~~- 820 (1196)
+.+++.|++.+++.|.++||++|.||+| .+.. +++...++||+|.|.+ |+.++||||.|+|++|+++.+
T Consensus 2 ~~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~ 81 (235)
T cd00670 2 TALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEI 81 (235)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccC
Confidence 5678999999999999999999999999 2222 3577789999999988 899999999999999999874
Q ss_pred ---CCCceeEEEecCeeecCCCC---C-CCcceeEeEEEEeCCC--CccchHHHHHHHHHHHHHcCCCCceEEEeCcHH
Q 000993 821 ---QKSSFKRYEISSVYRRAIGH---S-PPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890 (1196)
Q Consensus 821 ---~~~P~r~~Y~G~VfR~e~~~---~-~~~ef~Q~GvEiiG~~--~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~ 890 (1196)
...|+|+||+|+|||+|.++ . +.+||+|+|+|+||.+ +..+++|++.++.++|+.||+. +.+.+++.+
T Consensus 82 ~~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl~--~~i~~~~~~ 158 (235)
T cd00670 82 LSYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGLP--VRVVVADDP 158 (235)
T ss_pred ccchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEEccCh
Confidence 24699999999999998766 2 4457999999999998 6789999999999999999993 999999864
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.81 E-value=2.9e-20 Score=227.17 Aligned_cols=237 Identities=24% Similarity=0.379 Sum_probs=174.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.+|+.++.|-.|+||-||+++|+.+.+.+|+| ++.... +.|- +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 368999999999999999999999999999994 442211 1111 12222233222
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
|+=...+...++++.. ++.+++|||+.|
T Consensus 136 --------------------------------------------gDc~tllk~~g~lPvd--------mvla~Eylh~yg 163 (1205)
T KOG0606|consen 136 --------------------------------------------GDCATLLKNIGPLPVD--------MVLAVEYLHSYG 163 (1205)
T ss_pred --------------------------------------------chhhhhcccCCCCcch--------hhHHhHhhccCC
Confidence 2222333333333333 288999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||+||+|.+|+.-|++|+.|||+++............-........+.....||||.|.|||++.. ..|+..+|||
T Consensus 164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdww 242 (1205)
T KOG0606|consen 164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWW 242 (1205)
T ss_pred eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHH
Confidence 999999999999999999999999999864322211111000001111233455699999999999887 4699999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~ 693 (1196)
++|+|+||.+- ||.+..+.+.+-..+......|..-....++++++|.++|..+|..|. .+-++.+|.||+.+.
T Consensus 243 amGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 243 AMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 99999999983 999998888877777777777777666778999999999999999996 578899999999998
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
|.
T Consensus 323 w~ 324 (1205)
T KOG0606|consen 323 WK 324 (1205)
T ss_pred cc
Confidence 86
No 452
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=1.1e-19 Score=193.96 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=107.9
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh------------------------HHHHHHHHHHHHhcCCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQH 441 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~L~Hpn 441 (1196)
...||+|+||.||+|.+. +|+.||||+++....+... .....+|++.+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999997 8999999999754321111 112345999999998877
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHH
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKEL 520 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~ 520 (1196)
+....... ....+|||||++| ++.........++...
T Consensus 81 v~~p~~~~------------------------------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~ 118 (190)
T cd05147 81 IPCPEPIL------------------------------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESK 118 (190)
T ss_pred CCCCcEEE------------------------------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHH
Confidence 63322110 0112799999986 4444434456799999
Q ss_pred HHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 521 AWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
+..++.|++.+|.|| |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 119 ~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 119 ARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999999999 799999999999999998 578999999999753
No 453
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=8.5e-19 Score=187.31 Aligned_cols=141 Identities=23% Similarity=0.205 Sum_probs=110.1
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------------------------hHHHHHHHHHHHHhcCCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------------------VNDRILREVATLSRLQHQH 441 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------------------------~~~~~~~Ev~iL~~L~Hpn 441 (1196)
.+.||+|+||.||+|.+. +|+.||||+++....... ....+.+|...+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999988 999999999986432110 0123457899999999998
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCC-HHHHHhhcCCCCHHH
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKEL 520 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~ 520 (1196)
|......+. ...|+||||++|. +.........++...
T Consensus 81 i~~p~~~~~------------------------------------------~~~~lVmE~~~g~~~~~~~l~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILL------------------------------------------KKNVLVMEFIGDDGSPAPRLKDVPLEEEE 118 (190)
T ss_pred CCCceEEEe------------------------------------------cCCEEEEEEecCCCchhhhhhhccCCHHH
Confidence 743332210 0138999999873 433323445688889
Q ss_pred HHHHHHHHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhcc
Q 000993 521 AWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 570 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~ 570 (1196)
+..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999999999 9999999999999999 8999999999998653
No 454
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.78 E-value=1.2e-18 Score=198.64 Aligned_cols=149 Identities=13% Similarity=0.130 Sum_probs=128.5
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.++|+++++|.++.+++.|++.+++.|+++||++|.||.| ++. ++.+...++||++ +.+|+.++|||+.|+++
T Consensus 18 ~~~G~~~~~p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~-~~~~~~l~LRP~~~~~~ 96 (298)
T cd00771 18 AGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPF-EEEDEEYGLKPMNCPGH 96 (298)
T ss_pred CCCcceEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEe-ccCCceEEEcccCCHHH
Confidence 5789999999999999999999999999999999999999 332 3345578999999 45678999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCcc-chH-HHHHHHHHHHHHcCCCCce
Q 000993 814 IRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHAESC 882 (1196)
Q Consensus 814 aR~~a~~----~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~-aDa-EvI~la~~~L~~lgi~~~~ 882 (1196)
+|+++.. ...|+|+||+|+|||+|.++ .|.+||+|+|+|+||..+.. +++ |+|.++.++++.||+.. +
T Consensus 97 ~~~~~~~~~s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~-~ 175 (298)
T cd00771 97 CLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFD-Y 175 (298)
T ss_pred HHHHHhhccchhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCc-E
Confidence 9988863 24699999999999998775 35668999999999887653 343 79999999999999986 9
Q ss_pred EEEeCcHH
Q 000993 883 DIHLNHGD 890 (1196)
Q Consensus 883 ~i~Lg~~~ 890 (1196)
.|.+++++
T Consensus 176 ~i~l~~~~ 183 (298)
T cd00771 176 KVELSTRP 183 (298)
T ss_pred EEEEEcCh
Confidence 99999986
No 455
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.77 E-value=1.1e-18 Score=189.17 Aligned_cols=179 Identities=13% Similarity=0.152 Sum_probs=130.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHH------HHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDR------ILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~------~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
-++|++++.||.|+||.||++.. ++..+|||+++......+. ... +.+|+..+.++.||+|..+...+...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 36899999999999999999655 4778999999754432221 122 57899999999999999988776432
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
... ........+++|||++| +|.++.. +++ ....+|+.+
T Consensus 108 ~~~--------------------------------~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~ 147 (232)
T PRK10359 108 ERK--------------------------------TLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKAS 147 (232)
T ss_pred ccc--------------------------------cccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHH
Confidence 100 00112456899999987 7877632 333 245699999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|..||+.|++|||+||+||+++.++ ++|+|||..+...... ....++.. ..
T Consensus 148 l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---------------------------a~d~~vle-r~ 198 (232)
T PRK10359 148 IESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---------------------------AKDRIDLE-RH 198 (232)
T ss_pred HHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh---------------------------hHHHHHHH-hH
Confidence 9999999999999999999999988 9999999886432110 00012333 35
Q ss_pred CCCcchhHHHHHHHHHhh
Q 000993 612 IDEKADMYSLGIVFFELW 629 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELl 629 (1196)
|+.++|+||||+++.-+.
T Consensus 199 y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 199 YGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hcccccccceeEeehHHH
Confidence 778999999999876653
No 456
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes.
Probab=99.76 E-value=4.1e-19 Score=197.95 Aligned_cols=159 Identities=11% Similarity=0.086 Sum_probs=133.2
Q ss_pred cccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceE
Q 000993 730 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLL 803 (1196)
Q Consensus 730 ~~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~l 803 (1196)
..++.. ...++|+.|++|.++.+++.|++.+++.|+++||++|.||.| ++.. +.+...++||+|.|.+|+.+
T Consensus 11 ~~ag~~--~~~~~G~~~~lP~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l 88 (255)
T cd00779 11 LRAGFI--RQTSSGLYSWLPLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEF 88 (255)
T ss_pred HHcCCc--ccCCCceEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeE
Confidence 344444 346899999999999999999999999999999999999999 3332 34467899999999999999
Q ss_pred eecCC----CcHHHHHHHHhCCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchH---HHHHHHHHH
Q 000993 804 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDI 872 (1196)
Q Consensus 804 aLRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~ 872 (1196)
+|||+ +|..++|.+.+++..|+|+||+|+|||+| +++.| .+||+|+|+++||.+...+|+ |++.++.++
T Consensus 89 ~LrPt~e~~~t~~~~~~i~s~~~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~~~~a~~~~~~i~~~~~~i 168 (255)
T cd00779 89 LLGPTHEEVITDLVANEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDIDEESLEETYEKMYQAYSRI 168 (255)
T ss_pred EEecCCcHHHHHHHHhccccHhhCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCCHHHHHHHHHHHHHHHHHH
Confidence 99999 55555566555556799999999999999 88765 456999999999998888898 888899999
Q ss_pred HHHcCCCCceEEEeCcHHHH
Q 000993 873 VTRFFHAESCDIHLNHGDLL 892 (1196)
Q Consensus 873 L~~lgi~~~~~i~Lg~~~i~ 892 (1196)
|+.||+. +.+..++.+.+
T Consensus 169 l~~Lgl~--~~~~~~~~~~~ 186 (255)
T cd00779 169 FKRLGLP--FVKVEADSGAI 186 (255)
T ss_pred HHHcCCc--EEEEEecCCCC
Confidence 9999994 88887776544
No 457
>KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=2.4e-17 Score=185.21 Aligned_cols=356 Identities=15% Similarity=0.122 Sum_probs=239.1
Q ss_pred cccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCC
Q 000993 736 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHEL 809 (1196)
Q Consensus 736 ~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~ 809 (1196)
...+...|+-.++|..+++.+.+.+.++.-|+..||+||.||.+ .-+++++.+.++||+|.- ..++.+|.|.-
T Consensus 176 ff~~lSPGS~FflP~G~~iyN~Lv~fir~ey~~rGf~EVitPniy~~~LWe~SGHwqnY~enmF~~e~-eke~~~LKPMN 254 (560)
T KOG1637|consen 176 FFHELSPGSCFFLPHGTRIYNTLVDFIRAEYRKRGFTEVITPNIYNKKLWETSGHWQNYSENMFKFEV-EKEEFALKPMN 254 (560)
T ss_pred eeccCCCcceeeccCcchHHHHHHHHHHHHHHhcCCceecCcchhhhhhhhhccchhhhhhhceeeee-chhhhccCccC
Confidence 34577889999999999999999999999999999999999999 556778999999999965 45679999955
Q ss_pred cHHHHHHHHhC----CCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch-H-HHHHHHHHHHHHcCC
Q 000993 810 RLPFIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE-A-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 810 T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD-a-EvI~la~~~L~~lgi 878 (1196)
++.-.=+...+ +..|+|+.-+|.++|+|-.+ .+.|+|+|.+++||+..++.-| . -++..+.-++.-+|.
T Consensus 255 CPgHcLmf~~r~rS~reLPlR~aDFg~LHRnE~SGaLsGLTRvRrFqQDDaHIFCt~~Qi~~Eik~~l~fl~~vY~~fgf 334 (560)
T KOG1637|consen 255 CPGHCLMFAHRDRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTPDQVKEEIKGCLDFLDYVYGVFGF 334 (560)
T ss_pred CCccccccccCCccHhhCCccccCcceeeeccccccccccceeeeecccCceEEecCccHHHHHHHHHHHHHHHHHhccc
Confidence 55443333332 24599999999999998754 4667899999999999987543 3 567777777777776
Q ss_pred CCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Q 000993 879 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 958 (1196)
Q Consensus 879 ~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 958 (1196)
. +.+.|+.+.- +.+|.-+.|-++-..+-. ++.+.|-+-.....=.+|
T Consensus 335 ~--f~l~lSTRPe-----~~lG~l~~Wd~AE~~L~~----------------------al~e~g~pw~lN~GDGAF---- 381 (560)
T KOG1637|consen 335 T--FKLNLSTRPE-----KFLGDLETWDEAEFKLEE----------------------ALNESGEPWVLNPGDGAF---- 381 (560)
T ss_pred c--ceeEeccChH-----HhccCHHHHHHHHHHHHH----------------------HHHHhCCCceecCCCccc----
Confidence 4 8999999753 244544433322221111 111111110000001112
Q ss_pred cCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 959 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 959 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
.|+..++ .+.+++.+- ... ..|++|+-+.-.++- -|+. . -|
T Consensus 382 YGPKIDi------------~l~Dal~r~----hQc-aTIQLDFqLP~rFdL----~y~~---~---------------~g 422 (560)
T KOG1637|consen 382 YGPKIDI------------TLDDALGRK----HQC-ATIQLDFQLPIRFDL----EYET---E---------------DG 422 (560)
T ss_pred ccceeee------------EhhhhcCcc----cce-eeeeecccChhhcCc----eeec---c---------------cc
Confidence 2321110 000000000 000 134445444322221 0000 0 00
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecc-c-HHHHHhhccCCCCCC--CCCCCceEEEEEcCCCchHHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASL-A-LETIIQHYPVDFKPV--RNEAGTSVLVCSRGGGGLLVERMELVAEL 1114 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfai-g-lerl~~~L~~~~~~~--~~~~~~~vlv~~~~~~~~~~~a~~~a~~L 1114 (1196)
- .++++ -|.-|| | ++|.+++|.++.... .-..|-++.||+++ +....+|-++..+|
T Consensus 423 ~------------------~erPV-mIHRAIlGSvERmiaiL~E~~~gkwPFWlSPRq~~vIpVs-e~~~~ya~~V~~ql 482 (560)
T KOG1637|consen 423 D------------------LERPV-MIHRAILGSVERMIAILLESYGGKWPFWLSPRQAVVIPVS-EGPLDYATSVQKQL 482 (560)
T ss_pred c------------------ccchh-hHHHHHhhhHHHHHHHHHHHhCCCCCeeeccceEEEEECC-CcchhHHHHHHHHH
Confidence 0 01111 233333 3 899999998543333 33567889999997 78889999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEc---CCCcccccchHHHHHHHHHHH
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL---DVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l---~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+..|+-+++... +..+.+.++.|.-.++.++++||++|.+.++|.|+.+ +++.+..++++++++.+++.-
T Consensus 483 ~~a~f~~Dld~t-~~tl~kkir~Aqla~yn~i~VVGdkE~~~~~vnVr~Rd~~~~~~~~~~tie~~~~~~~~l~ 555 (560)
T KOG1637|consen 483 EEAGFYVDLDPT-DSTLRKKIRNAQLAHYNFIFVVGDKEVETGRVNVRTRDNRDNKTESEMTIEELSDEFKELK 555 (560)
T ss_pred HhhhceeecCCc-cchHHHHHhhhhhcceeEEEEEchhhhhcCceeeeccccccccccceeeHHHHHHHHHHhH
Confidence 999999998777 4789999999999999999999999999999999997 555567888999988877653
No 458
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=4.2e-18 Score=190.00 Aligned_cols=247 Identities=19% Similarity=0.265 Sum_probs=149.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCC-----------CCeeeeeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH-----------QHVVRYYQAW 449 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~H-----------pnIV~l~~~~ 449 (1196)
.+...+.||.|+++.||.+++..||+.+|+|++...... ....+++.+|.-....+.+ .-++++--.-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456788999999999999999999999999998765532 3345677777755555433 1122211111
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh---hcCCCC----HHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFD----KELAW 522 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~---~~~~l~----e~~~~ 522 (1196)
+... ..............-.+.+++|.-+.++|.+++. ...... .....
T Consensus 93 i~~~------------------------~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl 148 (288)
T PF14531_consen 93 IPGK------------------------PPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARL 148 (288)
T ss_dssp ETTS-------------------------SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHH
T ss_pred EcCC------------------------CcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHH
Confidence 0000 0000000000000112567888888888888764 222221 12224
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
.+..|+++.+++||+.|++|+||||+|++++.+|.+.|+||+.....+... .....+..|.|
T Consensus 149 ~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------~~~~~~~~~~P 210 (288)
T PF14531_consen 149 SLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------RCSEFPVAFTP 210 (288)
T ss_dssp HHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------EGGGS-TTTS-
T ss_pred HHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------eccCCCcccCC
Confidence 455899999999999999999999999999999999999999876543211 00234578999
Q ss_pred chhccCC-------CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 603 PEIEQGW-------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 603 PE~l~~~-------~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
||..... -.++.+.|.|+||+++|.||+ ||.............. ...+.+...+.||+.+|+.
T Consensus 211 Pe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~-------~C~~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 211 PELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFS-------RCRDMPEPVQFLIRGLLQR 283 (288)
T ss_dssp HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGT-------TSS---HHHHHHHHHHT-S
T ss_pred hhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccch-------hcCCcCHHHHHHHHHHccC
Confidence 9976431 237889999999999999997 8764432211100111 1123445789999999999
Q ss_pred CCCCC
Q 000993 673 SPSDR 677 (1196)
Q Consensus 673 dP~~R 677 (1196)
||.+|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
No 459
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type. This model describes a glycyl-tRNA synthetase distinct from the two alpha and two beta chains of the tetrameric E. coli glycyl-tRNA synthetase. This enzyme is a homodimeric class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes His, Ser, Pro, and this set of glycyl-tRNA synthetases.
Probab=99.74 E-value=1.5e-17 Score=199.17 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=99.5
Q ss_pred CCcc-eecccHHHHHhhccC-CCC-------------CCCCCCCceEEEEEcCCC-chHHHHHHHHHHHHHcCCeEEEee
Q 000993 1062 PSGV-GASLALETIIQHYPV-DFK-------------PVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVP 1125 (1196)
Q Consensus 1062 ~pAv-Gfaiglerl~~~L~~-~~~-------------~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~Lr~~Gi~vel~~ 1125 (1196)
+|.| --|+|+|||+.+|.+ ... .+...++.+|+|++...+ +....|.++++.||+.|++|+++.
T Consensus 414 ~P~VIepS~GIdRIi~ALle~~~~e~~~~~~~r~vL~lp~~lAP~kV~VIpl~~~~el~~~A~eIa~~LR~~GI~VeiD~ 493 (551)
T TIGR00389 414 IPHVIEPSFGIDRIIYALLEHSYQEEVLDGEEREVLRLPPHLAPIKVAVLPLVNKEELKEIAKEIFQALRKTGIRIKYDD 493 (551)
T ss_pred cceEEEcccCHHHHHHHHHHhhCccccccccccceeccCCccCCceEEEEEecCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 5654 788999999876642 111 011126889999998521 267889999999999999999877
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1126 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1126 ~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
. . ++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++.+.+.+.
T Consensus 494 s-~-sIGKq~rrADeiGiPf~IIIG~~EledgtVTIRdRdT~eQ~~I~ldeL~~~L~e~ 550 (551)
T TIGR00389 494 S-G-TIGKRYRRADEIGTPFCVTIDFETLEDETVTIRERDSMKQVRVKIKELPSYIKKL 550 (551)
T ss_pred C-C-CHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEeeHHHHHHHHHhh
Confidence 5 4 5999999999999999999999999999999999999999999999998887653
No 460
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=6.1e-17 Score=174.96 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=105.3
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-----CCCCeeeeeeeeeecCccccCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-----QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-----~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~------- 73 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD------- 73 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-------
Confidence 347899999999995 7767666 6998875432 2346789999999999 679999999987331
Q ss_pred CCcCCCCcccccccccccccccccccccccccccE-EEEEeeecC---CCHHHHHhhcCCCCHHHHHHHHHHHHHHH-HH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCP---RTLRQVFESYDHFDKELAWHLFRQIVEGL-AH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~iVmEy~~---gsL~~~l~~~~~l~e~~~~~i~~qIa~gL-~y 534 (1196)
..... +.+||||++ ++|.+++.+. .+++. ..++.|++.++ +|
T Consensus 74 ------------------------------~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~y 120 (210)
T PRK10345 74 ------------------------------CGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRY 120 (210)
T ss_pred ------------------------------CCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHH
Confidence 01123 347899954 5999999663 56666 35678888888 99
Q ss_pred HHhCCCcccCCCcCcEEecC----CCCeEEeccCcc
Q 000993 535 IHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLA 566 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~----~~~vKL~DFGlA 566 (1196)
||+++|+||||||+|||++. ++.++|+||+-+
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999974 347999994444
No 461
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=2.4e-16 Score=167.72 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=131.4
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch--hHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--VNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+...|++|+||+||.+.. .+..++.+.+........ ....+.+|+++|++|+ |++|+++++..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~----------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD----------- 71 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------
Confidence 3457899999999997765 578888776653322111 1125789999999995 57888887531
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..|++|+|+.| +|.+.+.. . ...++.|++.+|.++|++|
T Consensus 72 ---------------------------------~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 72 ---------------------------------GRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred ---------------------------------CEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc
Confidence 24899999977 66544321 1 2357889999999999999
Q ss_pred CcccCC-CcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcc-ccCcCccccccCCCchhccCCCCCC-Ccc
Q 000993 540 IIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS-VDGTGQVGTYFYTAPEIEQGWPKID-EKA 616 (1196)
Q Consensus 540 IiHrDL-Kp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~s-~ks 616 (1196)
|+|||| ||+|||++.++.++|+|||+|............ + ...+.. ....-..+++.|++|+.-.-....+ ...
T Consensus 112 IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~-L--~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~ 188 (218)
T PRK12274 112 VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL-L--AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRE 188 (218)
T ss_pred CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH-H--HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHH
Confidence 999999 799999999999999999999853321100000 0 000000 0001124788999998644322233 678
Q ss_pred hhHHHHHHHHHhhc
Q 000993 617 DMYSLGIVFFELWH 630 (1196)
Q Consensus 617 DVwSlGviLyELlt 630 (1196)
++++-|+-+|.++|
T Consensus 189 ~w~~~g~~~~~~~~ 202 (218)
T PRK12274 189 LWFATGKPVYRFVT 202 (218)
T ss_pred HHHHhcchHHHHHh
Confidence 99999999999997
No 462
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.68 E-value=1e-16 Score=189.40 Aligned_cols=236 Identities=25% Similarity=0.423 Sum_probs=170.3
Q ss_pred HHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh
Q 000993 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES 512 (1196)
Q Consensus 434 L~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~ 512 (1196)
|+.+.|.|+.+++|.++. ...+++|.+||. |+|.+.+..
T Consensus 1 l~~l~h~n~~~f~g~~~~----------------------------------------~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD----------------------------------------GPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred CcccchhhhhhheeeEec----------------------------------------CCceEEEEeeecCccHHhHHhc
Confidence 467899999999999853 256789999997 799999976
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 513 -YDHFDKELAWHLFRQIVEGLAHIHGQGI-IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 513 -~~~l~e~~~~~i~~qIa~gL~yLHs~gI-iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
...++.-....++++|+.||+|||...| .|+.|++.|++++....+||+|||+........ . ...
T Consensus 41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~------------~~~ 107 (484)
T KOG1023|consen 41 EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-E------------PEA 107 (484)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccc-c------------ccc
Confidence 4568888899999999999999999876 999999999999999999999999988653200 0 001
Q ss_pred CcCccccccCCCchhccCCC------CCCCcchhHHHHHHHHHhhc---CCchh----HHHHHHHHHhh-hc-CCCCCcc
Q 000993 591 GTGQVGTYFYTAPEIEQGWP------KIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLK-QK-GELPPSW 655 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~------~~s~ksDVwSlGviLyELlt---Pf~~~----~~~~~~~~~l~-~~-~~~p~~~ 655 (1196)
.....-...|.|||.+.+.. ..+.++|+||||++++|+++ ||... ...++...... .. ...|..+
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 12223456799999987631 14678999999999999995 77642 22334333222 11 1123222
Q ss_pred c--cCCHHHHHHHHHcccCCCCCCCCHHHHHhcc--CCCC--chHHHHHHHHHhcCCCCCCcchhhhccccccchhhhh
Q 000993 656 V--AKFSEQESLLRRLMSPSPSDRPSATELLQDA--LPPQ--MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDM 728 (1196)
Q Consensus 656 ~--~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~--~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~~~ 728 (1196)
. ...+++..+++.||..+|.+||+++++-... .... .+..+++.++++++ .|...++..++|++..+
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le------~Y~~nLe~~v~eRt~~l 260 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLE------SYADNLEKLVDERTAEL 260 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHH------HHHhhhHHHHHHHHHHH
Confidence 1 3344688999999999999999999985532 2222 23477788887774 37777777777755443
No 463
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.1e-16 Score=176.74 Aligned_cols=143 Identities=20% Similarity=0.150 Sum_probs=110.5
Q ss_pred CceEEeeeccCCcEEEEEEE-EccCCcEEEEEEEecCCCCc----------------------hhHHHHHHHHHHHHhcC
Q 000993 382 DFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 438 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~-~~~~g~~vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~L~ 438 (1196)
.|.+.+.||+|+||.||+|. +..+|+.||||+++...... .....+.+|+..++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999 66799999999997543110 01124568999999997
Q ss_pred CCC--eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC
Q 000993 439 HQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH 515 (1196)
Q Consensus 439 Hpn--IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~ 515 (1196)
+.+ +.+++.. ...|+||||++| +|.........
T Consensus 109 ~~~i~~p~~~~~--------------------------------------------~~~~lV~E~~~g~~L~~~~~~~~~ 144 (237)
T smart00090 109 EAGVPVPKPIAW--------------------------------------------RRNVLVMEFIGGDGLPAPRLKDVE 144 (237)
T ss_pred hcCCCCCeeeEe--------------------------------------------cCceEEEEEecCCcccccccccCC
Confidence 633 2233211 113799999987 56555434455
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~g-IiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
+....+..++.||+.+|++||++| |+||||||+||+++ ++.++|+|||.|...
T Consensus 145 ~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 145 PEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 677778899999999999999999 99999999999999 889999999998753
No 464
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.64 E-value=1.1e-15 Score=171.04 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=124.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcc---cccceEEEeecCC----ceEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQ---FKRNTVKLLTHGG----DLLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~---~~~~my~f~D~~G----~~laLRPD 808 (1196)
.++|+.+++|.+..+++.|++.+++.++++||++|.||.| ++.+.|.. ..++||.+.|.+| +.++|||+
T Consensus 20 ~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~~l~LrPt 99 (264)
T cd00772 20 PGRGIINFLPLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELEEDFALRPT 99 (264)
T ss_pred CCCCEEEECCcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccCceEEECCC
Confidence 4789999999999999999999999999999999999999 33322332 3478999999887 89999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHHHHHH---HHHHHHcC
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKVT---MDIVTRFF 877 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvI~la---~~~L~~lg 877 (1196)
.|++++++++.. +..|+|+||+|+|||+| +++. |.+||+|.++++|+.....+|.|+..+. .++++.||
T Consensus 100 ~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~~e~a~~e~~~~~~~~~~i~~~l~ 179 (264)
T cd00772 100 LEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHADAEEADEEFLNMLSAYAEIARDLA 179 (264)
T ss_pred CCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988763 35699999999999998 7754 4557999999999988878888776655 99999999
Q ss_pred -CCCceEEEeCcH
Q 000993 878 -HAESCDIHLNHG 889 (1196)
Q Consensus 878 -i~~~~~i~Lg~~ 889 (1196)
+. +.+.....
T Consensus 180 ~lp--~~~~~~~~ 190 (264)
T cd00772 180 AID--FIEGEADE 190 (264)
T ss_pred Ccc--EEEEEcCC
Confidence 63 77766653
No 465
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=2.6e-15 Score=173.43 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=103.7
Q ss_pred CCCCcc-eecccHHHHHhhcc------CCC-------CCCCCCCCceEEEEEcCC-CchHHHHHHHHHHHHHcCCeEEEe
Q 000993 1060 NPPSGV-GASLALETIIQHYP------VDF-------KPVRNEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFV 1124 (1196)
Q Consensus 1060 ~~~pAv-Gfaiglerl~~~L~------~~~-------~~~~~~~~~~vlv~~~~~-~~~~~~a~~~a~~Lr~~Gi~vel~ 1124 (1196)
+-+|.| --|+|+||++-++. +.. ..+...+|+++.|+++-. ++....|.++.+.||+.|+.|..+
T Consensus 413 ~~iP~VIEPSfGidRi~y~~l~~ay~~ee~~e~R~vLrl~p~lAPikvaVlPL~~k~~l~~~a~~i~~~L~~~~~~v~yD 492 (558)
T COG0423 413 KYIPHVIEPSFGIDRIFYALLEHAYTEEEVEEKRIVLRLPPDLAPIKVAVLPLVKKDELVEIAKEIFEKLRELGFNVDYD 492 (558)
T ss_pred eecCceeccCCCchHHHHHHHHHhhcccccccceeEEecCcccCceEEEEEeeecccchhHHHHHHHHHHHhcCceEEec
Confidence 346766 88999999965542 111 011235788888888742 247788999999999999999844
Q ss_pred eCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1125 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1125 ~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
. ..++++.++.+++.|.||+|.+.-+.+++++||||++++-+|+.++++++..+|.+.+...
T Consensus 493 d--sGsIGrRYrR~DEIGtPfcVTvD~eTleD~tVTiReRDs~~QvRv~i~el~~~l~~~~~~~ 554 (558)
T COG0423 493 D--SGSIGRRYRRQDEIGTPFCVTVDFETLEDNTVTIRERDSMEQVRVKIEELADYLRELIKGG 554 (558)
T ss_pred C--CCcHhhhhhhccccCCceEEEecCCcccCCcEEEeecCchheeeeeHHHHHHHHHHHhccc
Confidence 3 3599999999999999999999999999999999999999999999999999999987744
No 466
>PLN02734 glycyl-tRNA synthetase
Probab=99.64 E-value=2.3e-15 Score=182.79 Aligned_cols=122 Identities=19% Similarity=0.143 Sum_probs=99.4
Q ss_pred CCCCcc-eecccHHHHHhhccC-CC------------CCCCCCCCceEEEEEcCCC-chHHHHHHHHHHHHHcCCeEEEe
Q 000993 1060 NPPSGV-GASLALETIIQHYPV-DF------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFV 1124 (1196)
Q Consensus 1060 ~~~pAv-Gfaiglerl~~~L~~-~~------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~Lr~~Gi~vel~ 1124 (1196)
.-+|.| --|+|++||+.++.+ .. ..+...+|.+|.|++...+ .....|.++++.||+.|++|+++
T Consensus 526 ~~iP~VIEPS~GIgRIl~AilE~s~~~~~~De~R~~L~~Pp~IAP~qVaIlPL~~~ee~~~~A~eLa~~LR~~GIrVelD 605 (684)
T PLN02734 526 VFTPSVIEPSFGIGRIIYCLFEHSFYTRPGDEQLNVFRFPPLVAPIKCTVFPLVQNQQLNAVAKVISKELTAAGISHKID 605 (684)
T ss_pred eecCceEecCccHHHHHHHHHHHHhccccCCCcceEEecCcccCCcEEEEEEecCChHHHHHHHHHHHHHHhCCCEEEEE
Confidence 346766 889999999776541 11 1122356777777766422 35788999999999999999987
Q ss_pred eCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1125 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1125 ~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
.. +.++++++++|++.|+|++|+||. +|+|+||++++++|..++++++++.+.+.++
T Consensus 606 d~-~~SIGKRyrrADeiGIPf~ItIG~----dgtVTIRdRdsgeQ~rV~ldeLv~~I~~li~ 662 (684)
T PLN02734 606 IT-GTSIGKRYARTDELGVPFAVTVDS----DGSVTIRERDSKDQVRVPVEEVASVVKDLTD 662 (684)
T ss_pred CC-CCCHhHHHHHHHHcCCCEEEEECC----CCeEEEEECCCCceEEeeHHHHHHHHHHHHc
Confidence 66 669999999999999999999997 7999999999999999999999999988875
No 467
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly
Probab=99.62 E-value=1.2e-15 Score=170.22 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=117.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcC--CccccccceeecCCCcccccceEEEe----ecCCceEeecCCCc---
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHC--AKHLEIEPMYLLGDCPQFKRNTVKLL----THGGDLLELSHELR--- 810 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~G--y~~I~tP~~~~~~~~~~~~~~my~f~----D~~G~~laLRPD~T--- 810 (1196)
.++|+.||+|.++.+++.|++.+++.|.++| |.+|.||++... +||++. |.+++.++||||+|
T Consensus 20 ~~~G~~d~~P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~--------~mf~~~~g~~d~~~~~~~Lrp~~~~~~ 91 (254)
T cd00774 20 GVAGFYDYGPLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPE--------LMFKTSIGPVESGGNLGYLRPETAQGI 91 (254)
T ss_pred ChhcccccCchHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCH--------HHheeeecccCCCCcccccCCcccchH
Confidence 4789999999999999999999999999996 999999998433 677775 45678999999999
Q ss_pred -HHHHHHHHhCC-CCceeEEEecCeeecCCCC----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCC-c
Q 000993 811 -LPFIRWAISNQ-KSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE-S 881 (1196)
Q Consensus 811 -~~iaR~~a~~~-~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~-~ 881 (1196)
++++|.+..+. ..|+|+||+|+|||+|.++ .|.|||+|+|+|+||.++...+ ..++.+..+++..+|+.. .
T Consensus 92 ~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~G~~~~~ 171 (254)
T cd00774 92 FVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKFAQSPEN 171 (254)
T ss_pred HHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHcCCCccc
Confidence 79999887764 7899999999999998755 4667899999999998775433 378999999999999863 2
Q ss_pred eEEEeC
Q 000993 882 CDIHLN 887 (1196)
Q Consensus 882 ~~i~Lg 887 (1196)
+.+...
T Consensus 172 ~r~~~~ 177 (254)
T cd00774 172 LRLTDH 177 (254)
T ss_pred eEEEec
Confidence 344433
No 468
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=3.4e-15 Score=161.71 Aligned_cols=135 Identities=27% Similarity=0.342 Sum_probs=107.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.||+|++|.||+|.+ +|..+++|+......... ....+.+|+.++..+.|++|+....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe---------
Confidence 5799999999999988 578899998654322111 12457889999999999988655444321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+++|||++| +|.+++..... ....++.+++.+|.++|+.|
T Consensus 71 -------------------------------~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 71 -------------------------------PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred -------------------------------CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC
Confidence 2245899999976 89888865432 77889999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
++|||++|.|||++ ++.++|+|||.++.
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999999 78999999999864
No 469
>PRK14894 glycyl-tRNA synthetase; Provisional
Probab=99.61 E-value=2.7e-14 Score=166.10 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=85.7
Q ss_pred CCCceEEEEEcCCC--chHHHHHHHHHHHHHcCC-eEEEeeCCCCCHHHHHHHHHHCCCcEEEEE-------cCCcccCC
Q 000993 1088 EAGTSVLVCSRGGG--GLLVERMELVAELWEENI-KAQFVPVPDPSLTEQYEYASEHDIKCLVIL-------TDTGAQKG 1157 (1196)
Q Consensus 1088 ~~~~~vlv~~~~~~--~~~~~a~~~a~~Lr~~Gi-~vel~~~~~~~l~k~~~~A~~~g~~~~iii-------g~~E~~~g 1157 (1196)
.+|.+|.|+++.+. ....+|.++++.|++.|+ +|+++. +.+++++++.|+..|+||+|+| |++|.+++
T Consensus 432 LAPvQVaVLPLs~~~~~l~eyAkeI~~~L~~~Gi~rv~~Dd--sesIGKKyRraDeiGiPy~ITVD~~Tl~dGdkE~e~g 509 (539)
T PRK14894 432 LAPIKVAVFPLKRNHEGLVATAKAVRRQLQVGGRMRTVYDD--TGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDPALAG 509 (539)
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHHHHCCCceEEEcC--CCCHhHHHHhhhccCCCEEEEEeccccccccchhhcC
Confidence 46889999998621 234889999999999998 999765 3599999999999999999999 89999999
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1158 LVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1158 ~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+|+||++++++|..++++++++.|++++
T Consensus 510 TVTVR~RDs~eQ~rV~ideli~~L~~~~ 537 (539)
T PRK14894 510 TVTVRDRDTMAQERVPISELEAYLRDRV 537 (539)
T ss_pred eEEEEEeCCCeEEEEEHHHHHHHHHHHh
Confidence 9999999999999999999999998875
No 470
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=2.6e-15 Score=161.48 Aligned_cols=136 Identities=26% Similarity=0.226 Sum_probs=104.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch--------------------hHHHHHHHHHHHHhcCCCCe
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--------------------VNDRILREVATLSRLQHQHV 442 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--------------------~~~~~~~Ev~iL~~L~HpnI 442 (1196)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... ......+|..++..+.|+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 556688999999999999886 899999999875431110 11235678888888888753
Q ss_pred --eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHH
Q 000993 443 --VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 519 (1196)
Q Consensus 443 --V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 519 (1196)
+..++ ....+++|||++| +|..+... .
T Consensus 96 ~v~~~~~--------------------------------------------~~~~~lv~e~~~g~~L~~~~~~------~ 125 (198)
T cd05144 96 PVPKPID--------------------------------------------WNRHAVVMEYIDGVELYRVRVL------E 125 (198)
T ss_pred CCCceee--------------------------------------------cCCceEEEEEeCCcchhhcccc------c
Confidence 22221 1123899999986 66554321 3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
....++.+|+.++.++|+.||+||||||+||+++.++.++|+|||++...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678899999999999999999999999999999999999999999654
No 471
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=2.8e-15 Score=188.29 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=163.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e~~~~~ 456 (1196)
...|.+.+.||+|+||+||+|.+.. |+.||+|+-+..... +|+--.+++.+|+ -+-|..+..+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~------ 764 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHV------ 764 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHc------
Confidence 4678999999999999999999985 999999986543321 1222233444554 122333332221
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
-.+.-++|+||.+ |+|.++++..+.+++..+..+..|++.-+++|
T Consensus 765 ----------------------------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~l 810 (974)
T KOG1166|consen 765 ----------------------------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHL 810 (974)
T ss_pred ----------------------------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHH
Confidence 1122379999997 89999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecC-------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 536 HGQGIIHRDLTPNNIFFDA-------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~-------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|..+|||+||||+|+||.. ..-++|+|||.+-.+..-. .+ ..-+..++|-.+-.+|.+.|
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp-----------~~--~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP-----------DG--TKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC-----------CC--cEEeeeeccccchhHHHhcC
Confidence 9999999999999999943 2349999999986432110 00 12245678889999999999
Q ss_pred CCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCC-CCCccccCC-HHH-HHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE-LPPSWVAKF-SEQ-ESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~-~p~~~~~~~-~~l-~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++..+|.|.|+.+++-|+ |...+. ....... .+..+...+ .++ .+++..+|+.|-..=|...++.
T Consensus 878 -rpWtYq~DyfGlAa~~h~mL--FG~y~q------~~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr 947 (974)
T KOG1166|consen 878 -RPWTYQIDYFGLAATVHVML--FGKYME------VKNGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELR 947 (974)
T ss_pred -CCCchhhhhHHHHHHHHHHH--HHHHHH------hcCCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHH
Confidence 56999999999999999998 433333 1111111 111111111 122 4688888885555445555554
No 472
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.57 E-value=1.1e-14 Score=156.41 Aligned_cols=131 Identities=27% Similarity=0.322 Sum_probs=101.1
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-h-----hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-P-----VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~-----~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.||+|+||.||+|.+ +|..+++|+........ . ...++.+|+.+++.++|+++....-.+..
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---------- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD---------- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----------
Confidence 389999999999985 57899999865432111 1 13567789999999998875433322211
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++|||++| +|.+++..... .++.+++.+|.+||+.|+
T Consensus 69 ------------------------------~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 69 ------------------------------PDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ------------------------------CCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence 2234899999975 88887754321 788999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+|||++|.||+++ ++.++++|||+++.
T Consensus 112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999999 89999999999875
No 473
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=4.8e-16 Score=191.83 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
...|.+.+.||+|+|+.|-.+....+ ...+|+|.+.....+.....++..|..+-..+. |+|++.+++...
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~------- 91 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS------- 91 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-------
Confidence 35678888899999999988877533 446778877665545555566677888878886 999999987652
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHH-hhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVF-ESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l-~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....++.++|..| ++...+ .... ..+...+..++.|+..++.|
T Consensus 92 ---------------------------------~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~ 138 (601)
T KOG0590|consen 92 ---------------------------------SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSY 138 (601)
T ss_pred ---------------------------------CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccc
Confidence 34566888999754 777777 5444 67788889999999999999
Q ss_pred HH-hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc-cccCCCchhccCCCC
Q 000993 535 IH-GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG-TYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LH-s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~ 611 (1196)
+| ..++.||||||+|.+++..+ .++++|||+|..+... .+........+| ++.|+|||.+.+...
T Consensus 139 ~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~ 206 (601)
T KOG0590|consen 139 LHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK------------NGAERSLKDRCGSSPPYGAPEHLSGKAY 206 (601)
T ss_pred cCcccccccCCCCCccchhccCCCcccCCCchhhcccccc------------CCcceeeecccCCCCCCCCcccccchhh
Confidence 99 99999999999999999999 9999999999876431 111122345578 999999999988556
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..+..|+||.|+++.-+++ |+............+..... ....|........+++.+++..+|..|.+.+++-.+
T Consensus 207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 7889999999999999985 65544333222111221211 234566677788999999999999999999999999
Q ss_pred cCCCC
Q 000993 687 ALPPQ 691 (1196)
Q Consensus 687 ~~~~~ 691 (1196)
+|...
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 98876
No 474
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.55 E-value=2.1e-14 Score=177.49 Aligned_cols=137 Identities=26% Similarity=0.269 Sum_probs=105.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-Cc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..|...+.||+|+||+||+|.+. +..+++|+...+.. .. ....++.+|+.+++.++|++|+..+.++..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--- 407 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--- 407 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe---
Confidence 34456789999999999999875 44455554322211 11 123568899999999999998876544321
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....++||||++| +|.+++. ....++.|++.+|.
T Consensus 408 -------------------------------------~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~ 442 (535)
T PRK09605 408 -------------------------------------PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVA 442 (535)
T ss_pred -------------------------------------CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHH
Confidence 1235899999975 8888775 35678999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
|||++|++||||||+|||+ .++.++|+|||+++.
T Consensus 443 ~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 443 KLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999999999 678999999999975
No 475
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2e-14 Score=152.66 Aligned_cols=160 Identities=21% Similarity=0.253 Sum_probs=94.2
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.+.||+|+||.||+|.+. +|+.||||+++............. +...+....|++...+...+.+...... ..+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYR-TGDYRFGRKKSNWRYLSRLWAEKEFRNL--KRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhh-HHHHHhccCCcchhhhhhHHHHHHHHHH--HHHHHc
Confidence 367999999999999987 899999999875432221111111 0122333333333322211111000000 000000
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecCC-CHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR-QVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIH 542 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~-~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiH 542 (1196)
+..... . ......+++|||+++ ++. ..+.... . ...++.++.+++.++.++|+ +||+|
T Consensus 78 ~~~~~~-----------~------~~~~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 78 GVPVPK-----------P------IDLNRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred CCCCCc-----------e------EecCCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence 000000 0 000124899999986 221 1121111 1 16788999999999999999 99999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
|||||+||+++ ++.++|+|||.+...
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccc
Confidence 99999999999 899999999999754
No 476
>TIGR02367 PylS pyrrolysyl-tRNA synthetase. PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase.
Probab=99.48 E-value=2.3e-13 Score=156.96 Aligned_cols=123 Identities=11% Similarity=0.158 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHcCCcccccccee---e---cCC--CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCC---C
Q 000993 754 LRDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ---K 822 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~---~ 822 (1196)
-.+.+++.++++|..+||++|.||+|. + .+. +....++||++. +.++||||+|++++|+++.+. .
T Consensus 241 ~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~e----e~lvLRPdLTPsLaR~La~N~~~l~ 316 (453)
T TIGR02367 241 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRVD----KNFCLRPMLAPNLYNYLRKLDRALP 316 (453)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEec----CceEecccCHHHHHHHHHHhhhhcc
Confidence 457999999999999999999999992 2 122 344677899873 368999999999999988743 4
Q ss_pred CceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 823 SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
.|+|+||+|+|||+|.++.++ +||+|+|++++|.+...+|+| .++.++|+.||+. |.+
T Consensus 317 ~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~atfaDle--alL~e~Lr~LGId--fei 375 (453)
T TIGR02367 317 DPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--AIIKDFLDHLEID--FEI 375 (453)
T ss_pred CCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCCCCHHHHH--HHHHHHHHHCCCc--eEE
Confidence 599999999999998766544 579999999999998888777 5999999999983 666
No 477
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.46 E-value=6.6e-13 Score=147.01 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=103.4
Q ss_pred eeec-cCCcEEEEEEEEccCCcEEEEEEEecCCC-----------CchhHHHHHHHHHHHHhcCCCCe--eeeeeeeeec
Q 000993 387 QPLG-HGGFGHVVLCKNKLDGRHYAVKKIRLKDK-----------SLPVNDRILREVATLSRLQHQHV--VRYYQAWFET 452 (1196)
Q Consensus 387 ~~LG-~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-----------~~~~~~~~~~Ev~iL~~L~HpnI--V~l~~~~~e~ 452 (1196)
..|| .||.|+||++... +..+|||.+..... +.....++.+|+.++..|+|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 8889999988774 78899998854221 11223568889999999998885 5555443211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC--CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
. ......++||||++| +|.+++.. ..+++.. +.+|+.
T Consensus 115 ~------------------------------------~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~ 153 (239)
T PRK01723 115 H------------------------------------GLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQ 153 (239)
T ss_pred c------------------------------------CcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHH
Confidence 0 001123699999975 78888754 3455543 578999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+|.+||++||+||||||.|||++.++.++|+|||.++.
T Consensus 154 ~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 154 LIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999999999989999999999874
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=4.1e-14 Score=167.39 Aligned_cols=258 Identities=25% Similarity=0.358 Sum_probs=188.8
Q ss_pred CceEEeeecc--CCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGH--GGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~--G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.|.....+|. |.+|.||.+.. ..++..+|+|.-+..........+=++|+...+++ .|+|.++.+..|.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e------ 188 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE------ 188 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc------
Confidence 3445567888 99999999999 88999999998544333223333445677777777 6999999776663
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC-CCHHHHHHHHHHHHH----H
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVE----G 531 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~~i~~qIa~----g 531 (1196)
....+|+.+|+|+.+|..+.+.... ++...++..+.+..+ |
T Consensus 189 ----------------------------------~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~a 234 (524)
T KOG0601|consen 189 ----------------------------------GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTA 234 (524)
T ss_pred ----------------------------------cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccccc
Confidence 2456799999999988888776554 889999999999999 9
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
|.++|+.+++|-|+||.||++..+ ..++++|||+...+......... .......|...|++||.+++
T Consensus 235 l~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~----------~~~~r~~~~~~Y~~ke~~~~-- 302 (524)
T KOG0601|consen 235 LSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVF----------KVSKRPEGDCIYAAKELLNG-- 302 (524)
T ss_pred ccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccce----------eeeecCCCCceEeChhhhcc--
Confidence 999999999999999999999999 88999999999877544322111 11122267888999999987
Q ss_pred CCCCcchhHHHHHHHHHhhcCCchhHHHH-HHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 611 KIDEKADMYSLGIVFFELWHPFSTAMERQ-IVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELltPf~~~~~~~-~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
-++.+.|+||+|.++.+..+......... .....+ ....+|..+. ..+..+...+..|++.+|..|+++..++.+.+
T Consensus 303 l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~ 381 (524)
T KOG0601|consen 303 LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNV 381 (524)
T ss_pred ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccc
Confidence 58999999999999888763111100000 000001 1222343332 44557777999999999999999999999987
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
.+.+
T Consensus 382 i~s~ 385 (524)
T KOG0601|consen 382 IHSK 385 (524)
T ss_pred ccch
Confidence 7643
No 479
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes. seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B ....
Probab=99.45 E-value=2.7e-13 Score=142.72 Aligned_cols=136 Identities=14% Similarity=0.186 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHH-HcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC-----C
Q 000993 754 LRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-----Q 821 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~-----~ 821 (1196)
+++.|++.+++.+. ++||++|.||+| .+ .++.....++||++.|.+++.++|||+.+.++++++... +
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 46789999999999 999999999999 22 233455678899999999999999999999999988772 3
Q ss_pred CCceeEEEecCeeecC-CCC---CCCcceeEeEEEEeCCCC--ccchHHHHHHHHHHHHHcCCCCceEEEeCcHH
Q 000993 822 KSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGAS--ALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890 (1196)
Q Consensus 822 ~~P~r~~Y~G~VfR~e-~~~---~~~~ef~Q~GvEiiG~~~--~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~ 890 (1196)
..|+|+|++|++||+| ++. .|.+||+|.++++||.++ .....+++.++.++++.||+++ +.+.+++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~~-~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLEP-YRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSGC-EEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCce-EEEEEcCCC
Confidence 4699999999999998 444 345569999999999983 3566799999999999999953 999998754
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.40 E-value=2.4e-13 Score=167.32 Aligned_cols=281 Identities=23% Similarity=0.255 Sum_probs=202.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-.+++.+.+-+-+|+++.++.+.-..+|...++|+......-.. ..+....+-.++-.-.||-++...-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------- 872 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------- 872 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC---------
Confidence 46788999999999999999998888887777776543221100 11111112111111223333332110
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
| .....++++|+|.+ ++|...++..+..+.+-++.++..+..+++|||
T Consensus 873 ---------------~----------------~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~ 921 (1205)
T KOG0606|consen 873 ---------------F----------------PCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLH 921 (1205)
T ss_pred ---------------C----------------CCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccc
Confidence 0 12345789999996 589999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccc--ccc----------C----CCCCCCCCCccccCcCccccccC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ----------D----AAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~--~~~----------~----~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
+..+.|||++|.|+++..+++.+++|||.......-. ... . ...+....+..+......||+.|
T Consensus 922 s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~ 1001 (1205)
T KOG0606|consen 922 SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDY 1001 (1205)
T ss_pred cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcc
Confidence 9999999999999999999999999999554332110 000 0 00000000111223456899999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
.+||.+.+ ......+|+|++|++++|.++ ||.......++..++......|......++++++++.+++..+|.+|
T Consensus 1002 laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred cCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence 99999998 567889999999999999996 88888888887766665555565666677899999999999999999
Q ss_pred CCHH---HHHhccCCCCchHHHHHHH
Q 000993 678 PSAT---ELLQDALPPQMEYELLDNI 700 (1196)
Q Consensus 678 Pta~---eiL~~~~~~~~~~~~~~~~ 700 (1196)
..+. ++-.|+||+...|+.+..-
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q 1106 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQ 1106 (1205)
T ss_pred cCcccccccccCCccCCCCccccccc
Confidence 9877 8899999999999877553
No 481
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional
Probab=99.40 E-value=1.1e-12 Score=159.49 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=118.2
Q ss_pred cccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee---------c----------C----CC-c--c
Q 000993 734 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL---------L----------G----DC-P--Q 787 (1196)
Q Consensus 734 ~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~---------~----------~----~~-~--~ 787 (1196)
+...|-...| +|++|.+...++++++.++++|.++||++|.||.+.. . . +. . .
T Consensus 215 ~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~ 293 (489)
T PRK04172 215 FRPYNVKAPP-PKIYPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGD 293 (489)
T ss_pred CccceeCCCC-CCCCCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCccccc
Confidence 3445555556 8999999999999999999999999999999999931 1 0 00 0 0
Q ss_pred ----c----------------ccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEecCeeecCCCCCC-Ccce
Q 000993 788 ----F----------------KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSP-PNRY 846 (1196)
Q Consensus 788 ----~----------------~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~-~~ef 846 (1196)
. .-=+|.|.+..++.++|||++|++++|+++++...|+|+|++|+|||++.++.+ .+||
T Consensus 294 ~~~~~~~~v~~~he~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~~~p~rlFeiGrVFR~e~~d~~~l~Ef 373 (489)
T PRK04172 294 LPEELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRPEPPQKYFSIGRVFRPDTIDATHLPEF 373 (489)
T ss_pred CcHHHHHHHHHHHhccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcCCCCeEEEEecceEcCCCCCcccCCch
Confidence 0 001577878888999999999999999999887889999999999999886644 4689
Q ss_pred eEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 847 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 847 ~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
+|+++.++|.+ ...++++.++.+++..+|+.+ +.+
T Consensus 374 ~ql~~~i~G~~--~~f~elkg~l~~ll~~lGi~~-~~~ 408 (489)
T PRK04172 374 YQLEGIVMGED--VSFRDLLGILKEFYKRLGFEE-VKF 408 (489)
T ss_pred heEEEEEEeCC--CCHHHHHHHHHHHHHHhCCce-EEE
Confidence 99999999974 347899999999999999853 444
No 482
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.39 E-value=1.6e-12 Score=131.14 Aligned_cols=131 Identities=28% Similarity=0.328 Sum_probs=104.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
+++.||.|.++.||++... +..+++|....... ...+.+|+..++.++| +++++++..+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~------------ 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGE------------ 63 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcC------------
Confidence 3578999999999999985 47899998754322 4568899999999976 47888775431
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~--- 538 (1196)
.....|++|||++| .+..+ +......++.+++.+|++||..
T Consensus 64 ----------------------------~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 64 ----------------------------SDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred ----------------------------CCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 12356999999976 44332 4556677889999999999985
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+++|+||+|.||+++..+.+++.|||.++.
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccC
Confidence 699999999999999989999999999874
No 483
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria.
Probab=99.36 E-value=6.9e-13 Score=148.64 Aligned_cols=144 Identities=10% Similarity=0.111 Sum_probs=115.8
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecCCc----eEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 808 (1196)
.+.|+.+++|.++.+.+.|++.+++.+.++||++|.||.+ .+. ++.+...++||++.|.+++ .++|||+
T Consensus 20 ~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f~~~~f~~~~~~~~~~~~~~~L~Pt 99 (261)
T cd00778 20 PVKGCMVFRPYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGFAPEVAWVTHGGLEELEEPLALRPT 99 (261)
T ss_pred CCCCeEEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhcCcceEEEEecCCcccCCcEEEcCC
Confidence 4679999999999999999999999999999999999999 222 2245568899999998754 8999999
Q ss_pred ----CcHHHHHHHHhCCCCceeEEEecCeeecCCCC----CCCcceeEeEEEE-eCCCCccch--HHHHHHHHHHHHHc-
Q 000993 809 ----LRLPFIRWAISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASALTE--AEVLKVTMDIVTRF- 876 (1196)
Q Consensus 809 ----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~aD--aEvI~la~~~L~~l- 876 (1196)
+|..+++.+.+++..|+|+|++|++||+|..+ .|.+||+|.++.. +...+...+ .+++.+..++++.|
T Consensus 100 ~e~~~~~~~~~~i~s~r~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~~~~e~~~~~~~~~~~~~~~i~~~ll 179 (261)
T cd00778 100 SETAIYPMFSKWIRSYRDLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAHATEEEAEEEVLQILDLYKEFYEDLL 179 (261)
T ss_pred CCHHHHHHHHhhccchhhcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeeccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777787777777899999999999997654 2445799999985 565443222 37788889999998
Q ss_pred CCCCceEEE
Q 000993 877 FHAESCDIH 885 (1196)
Q Consensus 877 gi~~~~~i~ 885 (1196)
|+. +.+.
T Consensus 180 gl~--~~~~ 186 (261)
T cd00778 180 AIP--VVKG 186 (261)
T ss_pred CCe--EEEe
Confidence 885 5443
No 484
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=99.32 E-value=5.8e-12 Score=118.72 Aligned_cols=90 Identities=24% Similarity=0.419 Sum_probs=84.3
Q ss_pred eEEEEEcCCC---chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 000993 1092 SVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1168 (1196)
Q Consensus 1092 ~vlv~~~~~~---~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~ 1168 (1196)
+|+|++.+ . +...+|.++++.||+.|++|++++. +.++++++++|++.|+||++++|++|.++|+|+||++.+++
T Consensus 1 qv~Ii~~~-~~~~~~~~~a~~l~~~L~~~gi~v~~d~~-~~~~~k~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~ 78 (94)
T PF03129_consen 1 QVVIIPVG-KKDEEIIEYAQELANKLRKAGIRVELDDS-DKSLGKQIKYADKLGIPFIIIIGEKELENGTVTVKDRDTGE 78 (94)
T ss_dssp SEEEEESS-CSHHHHHHHHHHHHHHHHHTTSEEEEESS-SSTHHHHHHHHHHTTESEEEEEEHHHHHTTEEEEEETTTTE
T ss_pred CEEEEEeC-CCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCchhHHHHHHhhcCCeEEEEECchhHhCCEEEEEECCCCc
Confidence 57888986 5 6788999999999999999998885 78999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 000993 1169 EKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1169 q~~v~~~el~~~l~~ 1183 (1196)
+..+++++++++|++
T Consensus 79 ~~~v~~~el~~~l~~ 93 (94)
T PF03129_consen 79 QETVSLEELIEYLKE 93 (94)
T ss_dssp EEEEECCHHHHHHHH
T ss_pred EEEEEHHHHHHHHhh
Confidence 999999999999876
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=2.4e-12 Score=152.66 Aligned_cols=249 Identities=25% Similarity=0.274 Sum_probs=181.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~-~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++++.+|.++..||.|.|+.|+.+..+ .++..|++|.+............-..|+.+...+ .|.++++++..|.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-- 337 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-- 337 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--
Confidence 5678899999999999999999998766 6788999997764444333333445677777777 69999999888843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
....||..|||. +++...+.....+++...+++..|++.++
T Consensus 338 --------------------------------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 --------------------------------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --------------------------------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 345579999995 46555554445688889999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC-CchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT-APEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 610 (1196)
.++|+..++|+|+||+||++..+ +..+++|||..+.+... ......+-+++ .+|++....
T Consensus 380 ~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------------------~~~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 380 NVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------------------SGVFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred ccccchhhhcccccccceeeccchhhhhcccccccccccee------------------cccccccccccccchhhcccc
Confidence 99999999999999999999886 78899999998643211 11122333444 366666556
Q ss_pred CCCCcchhHHHHHHHHHhhc--CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.+..++|++|||..+.+..+ |+..... ....+ ..+..|-. ......+..+.+.++.+++..||.+.++..|.
T Consensus 442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--~~~~i--~~~~~p~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 442 PHLSKADIFSLGLSVDEAITGSPLSESGV--QSLTI--RSGDTPNL-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred ccccccccccccccccccccCcccCcccc--cceee--ecccccCC-CchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 78899999999999999886 3322211 11111 12222222 22225678899999999999999999988775
No 486
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.28 E-value=9.8e-12 Score=147.79 Aligned_cols=398 Identities=12% Similarity=0.080 Sum_probs=231.0
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEe
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLE 804 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~la 804 (1196)
.++.++ +..+|+.-|+|...++++.|++.+++.+++.|.+++..|+| ..+++++.+.++||+++|.+++.++
T Consensus 28 rAg~i~--~~~~G~y~~lP~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~l~ 105 (500)
T COG0442 28 RAGMIR--KPVKGLYVWLPLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRPLA 105 (500)
T ss_pred hcCcee--cccCceEEECccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCceee
Confidence 445554 37899999999999999999999999999999999999999 2234577788999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEEecCeeecCC-CC---CCCcceeEeEEEEeCCCCccchHHH---HHHHHHHH
Q 000993 805 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRAI-GH---SPPNRYLQGDFDIIGGASALTEAEV---LKVTMDIV 873 (1196)
Q Consensus 805 LRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~-~~---~~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L 873 (1196)
|||- +|.-+..++.+++.+|+++|+++++||+|. |. -|.|||+--++.-|-.+...++.+. +.+=.+++
T Consensus 106 L~PTsEe~it~~~~~~i~SYkdLPl~lYQi~~kfRdE~rpr~gllR~REF~mkdaySfh~~~e~a~~~y~~~~~~Y~~if 185 (500)
T COG0442 106 LRPTSEEVITDMFRKWIRSYKDLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHADEEDAEETYEKMLDAYSRIF 185 (500)
T ss_pred eCCCcHHHHHHHHHHHhhhhhhCCcceeeeeeEEeccccCCCCccchheeeecccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9995 333344477778899999999999999964 44 3566898888887776666666544 45556777
Q ss_pred HHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-CCCCCcccccccHHH-HHHHHHHhc-CCcHHHHH-
Q 000993 874 TRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG-SLRPQSSEWKSKWVV-IRRQLLQEL-NLAEAVVN- 949 (1196)
Q Consensus 874 ~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d-~~~~~~~~~k~~~~~-~~~~~~~~~-~l~~~~~~- 949 (1196)
.++|+. +...--+.++..+-... + +..+- ..+. +.+.... .-..+-... .+..+..+
T Consensus 186 ~~i~l~--~~~~~ad~g~~Gg~~S~---------e----F~~l~pd~ge----~qi~ts~~y~aN~e~a~~~~~~~~~~~ 246 (500)
T COG0442 186 LRLPLI--FGPVPADEGFIGGSYSH---------E----FEALMPDGGE----DQIATSHHYGANFEKAFIDIKFEDEEE 246 (500)
T ss_pred HhCCce--EEeecccCCCCCCccce---------E----EEEEccCCCc----cEEEEecchHHhHHHhccCCCcccccc
Confidence 777874 56655554443211000 0 00000 0000 0000000 000000000 00000000
Q ss_pred HHHHHHH----HhcCChhhHHHHHhcc-CCCC-------------------------hH---HHHHHHHH--HHHHcCCC
Q 000993 950 RLQTVGL----RFCGAADQALPRLRGA-LPAD-------------------------KP---TRKALDEL--YLRIWRIE 994 (1196)
Q Consensus 950 ~l~~l~~----~~~g~~~~~l~~l~~~-~~~~-------------------------~~---~~~~l~~L--~l~~~g~~ 994 (1196)
.-..+.. -++.. . .+..+ .-++ .. ..+.-.++ .+.. +.
T Consensus 247 ~~~~~v~t~s~~~s~r---~--~~~~i~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ga~~h~~~~~~~rd~~~~l~~--~~ 319 (500)
T COG0442 247 GELEYVHTTSYGISTR---I--IGAAILIHGDNEGLVLPPIVADIQVVIVPIFIKGANEHYKVVNYGRDVAEPLEK--LG 319 (500)
T ss_pred ccceEecccceEEEee---e--eeEEEEEecCCCCccCCchhccceEEEEeccccCcchhhhhhhhhhhhhhhhhh--cc
Confidence 0000000 00000 0 00000 0000 00 00001111 1111 11
Q ss_pred ceEEEc-CC-CCCCCCCcc------ceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcce
Q 000993 995 KNIYID-AL-MPPIESYHR------NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVG 1066 (1196)
Q Consensus 995 ~~i~~D-l~-lvrgl~YYT------G~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvG 1066 (1196)
.++..| .+ ...|.-||. |.+|+ -|=||-.-... -+....|...+.-.+-
T Consensus 320 ~~~~~D~~~~~~~G~kl~~~e~ieVghif~-------------------lG~kyse~~~a----~v~~r~g~~~~~~mg~ 376 (500)
T COG0442 320 IRVEGDDRSPDGPGFKLNIWEGIEVGHIFE-------------------LGTKYSEAMNA----TVLDRDGKEQPKTMGC 376 (500)
T ss_pred eEEeccccCCCCCCceeeeeeccccCEEEE-------------------ECchhhhhCee----EEEecCCCccceEEEe
Confidence 234444 21 122221221 22333 35566533111 0122334443344556
Q ss_pred ecccHHHHH-hhccC-----CCCCCCCCCCceEEEEEcCCCc--hHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHH
Q 000993 1067 ASLALETII-QHYPV-----DFKPVRNEAGTSVLVCSRGGGG--LLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEY 1137 (1196)
Q Consensus 1067 faiglerl~-~~L~~-----~~~~~~~~~~~~vlv~~~~~~~--~~~~a~~~a~~Lr~~G-i~vel~~~~~~~l~k~~~~ 1137 (1196)
+++|++|++ +++++ +........+.++.|+..+..+ ....|-+++..|..+| ..|.+..+ +.+.+-.+..
T Consensus 377 ygigvsr~v~a~ieq~~d~~gi~w~~a~apf~~~iv~~n~~~~~~~~~~~~~~~~l~~~G~~e~~~ddr-~er~g~k~~~ 455 (500)
T COG0442 377 YGIGVSRLVAALLEQIHDENGIIWPKAIAPFDVHIVPVNTKDFKQAEAAEKLYVELPWCGTVEVLLDDR-DERPGVKFAD 455 (500)
T ss_pred hhhhhhhHHHHHHHHhcccccCccccccCcceeEEEEcCchhHHHHHHhhhHHHHHHhCCchhhhhhhh-ccccCccccC
Confidence 789999954 44442 2222224567788888875322 2233445688889999 88887666 5678888899
Q ss_pred HHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1138 ASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1138 A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
|+-.|+|+.+++|++ .++|.|.+|...+|+...++...++.++
T Consensus 456 a~liGiP~~~~~g~~-~~~g~~e~k~r~~ge~~~~~~~~l~~~~ 498 (500)
T COG0442 456 ADLIGIPLRIVVGKR-LAEGEVEVKCRKCGEKEAVTIEALFARL 498 (500)
T ss_pred CeEecccceeeeccc-ccCCceeEEecCCCchhhccHHHHHHHh
Confidence 999999999999999 8889999999999999988888887654
No 487
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.25 E-value=2.6e-11 Score=114.13 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=81.8
Q ss_pred CceEEEEEcCCC--chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1090 GTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1090 ~~~vlv~~~~~~--~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
|.++.|++.... ....+|++++..||+.|++|++++. .+++++++++|++.|+++++++|++|+++++|+||++.++
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~-~~~l~k~i~~a~~~g~~~~iiiG~~e~~~~~v~vk~~~~~ 79 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDR-NERPGVKFADADLIGIPYRIVVGKKSAAEGIVEIKVRKTG 79 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCCcccchhHHHhcCCCEEEEECCchhhCCEEEEEECCCC
Confidence 457888888521 4678999999999999999998877 5799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHH
Q 000993 1168 KEKEVQRESLVRFL 1181 (1196)
Q Consensus 1168 ~q~~v~~~el~~~l 1181 (1196)
++..++++++++.+
T Consensus 80 ~~~~~~~~~~~~~l 93 (94)
T cd00861 80 EKEEISIDELLEFL 93 (94)
T ss_pred cceEEeHHHHHHhh
Confidence 99999999997765
No 488
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed
Probab=99.23 E-value=3.9e-11 Score=139.53 Aligned_cols=123 Identities=11% Similarity=0.149 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHHHHcCCcccccccee----e--cCC--CcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMY----L--LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~--~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~ 823 (1196)
...+++.++++|..+||.+|.||.|. + .+. +....+.||.+ | +.++|||++|++++|+++.+ ...
T Consensus 206 ~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i-d---eel~LRpsLtPsLlr~la~n~k~~~~ 281 (417)
T PRK09537 206 LGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV-D---KNFCLRPMLAPGLYNYLRKLDRILPD 281 (417)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee-C---CceEehhhhHHHHHHHHHhhhhcccC
Confidence 56899999999999999999999992 1 111 23445778876 2 47999999999999988764 356
Q ss_pred ceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 824 SFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|+|+||+|+|||+|.++.+ .+||+|+|++++|.+...+| +..++.++|+.||+. |++.
T Consensus 282 P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~~~f~d--L~~lleeLL~~LGI~--f~i~ 340 (417)
T PRK09537 282 PIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSGCTREN--LENIIDDFLKHLGID--YEII 340 (417)
T ss_pred CeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCchHHHH--HHHHHHHHHHHCCCC--cEEe
Confidence 9999999999999876544 45799999999997766655 669999999999984 7766
No 489
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.23 E-value=7e-11 Score=110.36 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=82.1
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 000993 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1169 (1196)
Q Consensus 1090 ~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q 1169 (1196)
|.+++|++.+ +....+|+++++.||+.|++|++++. .+++++++++|++.|++++|++|++|.+.++++++||.++++
T Consensus 1 p~~v~ii~~~-~~~~~~a~~~~~~Lr~~g~~v~~d~~-~~~~~~~~~~a~~~g~~~~iiig~~e~~~~~v~lk~~~~~~~ 78 (91)
T cd00860 1 PVQVVVIPVT-DEHLDYAKEVAKKLSDAGIRVEVDLR-NEKLGKKIREAQLQKIPYILVVGDKEVETGTVSVRTRDGGDL 78 (91)
T ss_pred CeEEEEEeeC-chHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcc
Confidence 4578888875 66788999999999999999998877 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHH
Q 000993 1170 KEVQRESLVRFL 1181 (1196)
Q Consensus 1170 ~~v~~~el~~~l 1181 (1196)
..++++++++.+
T Consensus 79 ~~~~~~~~~~~~ 90 (91)
T cd00860 79 GSMSLDEFIEKL 90 (91)
T ss_pred ceEcHHHHHHHh
Confidence 999999987654
No 490
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.22 E-value=8.7e-11 Score=116.21 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=85.7
Q ss_pred CCCceEEEEEcCC-CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1088 EAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1088 ~~~~~vlv~~~~~-~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
.++.+|+|++.+. +....+|+++++.||++|++|++++. +++++++++|++.|+++++++|++|.++|+|++|++.+
T Consensus 24 lap~~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~~--~sl~kqlk~A~k~g~~~~iiiG~~e~~~~~v~lk~l~~ 101 (121)
T cd00858 24 LAPIKVAVLPLVKRDELVEIAKEISEELRELGFSVKYDDS--GSIGRRYARQDEIGTPFCVTVDFDTLEDGTVTIRERDS 101 (121)
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeCC--CCHHHHHHHhHhcCCCEEEEECcCchhCCEEEEEECCC
Confidence 4577899988741 34677899999999999999998776 69999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l 1185 (1196)
+++..++++++++.+.+.+
T Consensus 102 ~~~~~v~l~~l~~~l~~~~ 120 (121)
T cd00858 102 MRQVRVKIEELPSYLRELI 120 (121)
T ss_pred CceEEEEHHHHHHHHHHHh
Confidence 9999999999988887654
No 491
>KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.21 E-value=1.1e-10 Score=128.54 Aligned_cols=121 Identities=12% Similarity=0.160 Sum_probs=100.0
Q ss_pred cccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEee
Q 000993 732 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLEL 805 (1196)
Q Consensus 732 ~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laL 805 (1196)
-|+++ +...|+.-++|...+..+++.+.+..-+..-|.+.|..|++ ...+.++....+||+|.|+.|+.+||
T Consensus 34 ~GfI~--ps~~G~yq~LPlg~R~~~K~~~~l~~~mqs~Ga~kIslp~ls~~~LWekTgRw~~~gsEl~rl~Dr~gkq~cL 111 (457)
T KOG2324|consen 34 VGFIR--PSSPGLYQLLPLGLRVLNKLCRLLDNEMQSGGAQKISLPILSSKELWEKTGRWDAMGSELFRLHDRKGKQMCL 111 (457)
T ss_pred hCccc--cCCCCceeeccchHHHHHHHHHHHHHHHHhccCeeEeecccChHHHHHhcCcccccchhheEeeccCCCEecc
Confidence 34543 56689999999999999999999999999999999999999 33344777889999999999999999
Q ss_pred cCCCcHHHHHHHHhC-----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEe
Q 000993 806 SHELRLPFIRWAISN-----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDII 854 (1196)
Q Consensus 806 RPD~T~~iaR~~a~~-----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEii 854 (1196)
-|-----|.+.+++. +..|+++|++|+-||.| +|+. |.|||+.-|.=-|
T Consensus 112 ~pThEE~iT~lmat~~~lsykqlPi~vYQigrKfRDElrpRfGLlRgREFlMKDmYsF 169 (457)
T KOG2324|consen 112 TPTHEEDITALMATYIPLSYKQLPIRVYQIGRKFRDELRPRFGLLRGREFLMKDMYSF 169 (457)
T ss_pred CCchHHHHHHHHHhcCccccccCcEEeeeechhhhhccCccccchhhHHHHHhhhhcc
Confidence 996666777777774 34699999999999996 4664 4456988887444
No 492
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional
Probab=99.18 E-value=1.8e-10 Score=136.42 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=117.2
Q ss_pred cchhhhHhhHHHHHHHHHHHHHcCCccccccc-e---------eecC--CCcccccceEEEeec----------------
Q 000993 747 YSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP-M---------YLLG--DCPQFKRNTVKLLTH---------------- 798 (1196)
Q Consensus 747 ~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~-~---------~~~~--~~~~~~~~my~f~D~---------------- 798 (1196)
..+...--...+.+.++++|..-||+++.+|. + ++.. |-.=.....|-+.++
T Consensus 223 ~~~g~~HPl~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~~~p~~~~~~V 302 (494)
T PTZ00326 223 IGGGNLHPLLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVNDLDDDYVERV 302 (494)
T ss_pred CCCCCCChHHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccccCcHHHHHHH
Confidence 33334444578899999999999999998874 3 1111 100012334544321
Q ss_pred ---------------------CCceEeecCCCcHHHHHHHHhCC-------C-CceeEEEecCeeecCCCCCCC-cceeE
Q 000993 799 ---------------------GGDLLELSHELRLPFIRWAISNQ-------K-SSFKRYEISSVYRRAIGHSPP-NRYLQ 848 (1196)
Q Consensus 799 ---------------------~G~~laLRPD~T~~iaR~~a~~~-------~-~P~r~~Y~G~VfR~e~~~~~~-~ef~Q 848 (1196)
..+.++||+++|++.+|+++++. . .|+|+|++|+|||+|..+..+ .+|+|
T Consensus 303 k~~He~G~~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~DatH~~eFhQ 382 (494)
T PTZ00326 303 KKVHEVGGYGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETLDATHLAEFHQ 382 (494)
T ss_pred HHHhccCCcCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCCCCCcCceeEE
Confidence 11478999999999999999852 2 399999999999998866555 47999
Q ss_pred eEEEEeCCCCccchHHHHHHHHHHHHHcCCCC-ceE-----------------------EEeCcHHHHH-HHHHHcCCCH
Q 000993 849 GDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCD-----------------------IHLNHGDLLE-AIWSWAGIKA 903 (1196)
Q Consensus 849 ~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~-~~~-----------------------i~Lg~~~i~~-~~l~~lgl~~ 903 (1196)
+++.++|.+. ++++++.++.++++++|+.+ .|+ |+|++.++++ .+++.+|+++
T Consensus 383 ~Eg~vi~~~~--s~~~L~~~l~~f~~~lG~~~~RfrP~yfPfTEPS~Ev~v~~~~~gkWIEIgg~Gm~rpevL~~~Gi~~ 460 (494)
T PTZ00326 383 VEGFVIDRNL--TLGDLIGTIREFFRRIGITKLRFKPAFNPYTEPSMEIFGYHPGLKKWVEVGNSGIFRPEMLRPMGFPE 460 (494)
T ss_pred EEEEEEeCCC--CHHHHHHHHHHHHHhcCCCceEEecCCCCCCCCeeEEEEEecCCCcEEEEeCcCccCHHHHHhcCCCC
Confidence 9999999775 78999999999999999853 265 8999999998 9999999863
No 493
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.16 E-value=1.2e-10 Score=139.97 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=56.0
Q ss_pred EEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHH-HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 495 LYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVE-GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 495 l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~-gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
-++||||++| +|.++.... ...+ ...++.+++. .+..+|..|++|+|+||.||+++.++.++|+|||++..+
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 4899999976 777665422 1222 2345555655 478899999999999999999999999999999999765
No 494
>smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain.
Probab=99.15 E-value=1.3e-10 Score=112.18 Aligned_cols=83 Identities=33% Similarity=0.483 Sum_probs=74.7
Q ss_pred cceEeecCCCCCC-CCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 17 RAQSKDHSSSTVD-DNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+.|++.+....++ .+..+.+.|+|.+|++||+++|.+.+....+++..++..|...|.+++++|+ ||+|||++++.+
T Consensus 23 ~~~~i~l~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~~~~~~~l~~~~~~~l~~~l~~~~~e~~--g~~~if~~v~~~ 100 (107)
T smart00591 23 PEITIKLSPSSDEGEDQYVSLTLQVKLPENYPDEAPPISLLNSEGLSDEQLAELLKKLEEIAEENL--GEVMIFELVEKL 100 (107)
T ss_pred cEEEEEEecCCCCCCccceEEEEEEECCCCCCCCCCCeEEECCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhhHHHHHH
Confidence 3788888765542 3447999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHh
Q 000993 96 QEFLSE 101 (1196)
Q Consensus 96 ~e~l~~ 101 (1196)
||||++
T Consensus 101 ~e~l~~ 106 (107)
T smart00591 101 QEFLSE 106 (107)
T ss_pred HHHHhc
Confidence 999975
No 495
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Probab=99.14 E-value=3.2e-10 Score=122.56 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee----cCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCC-CCceeEEE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYE 829 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~-~~P~r~~Y 829 (1196)
++.+++.++++|..+||.+|.||.|.. ...+.. .+.++.+.+..++..+|||++|+++++.++.|. ..|+|+||
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfe 80 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHE-PKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAE 80 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCcc-HhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEE
Confidence 578899999999999999999999922 111211 234666667778999999999999999998764 45999999
Q ss_pred ecCeeecCCCC---CCCcceeEeEEEEeCCCCc--cchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 830 ISSVYRRAIGH---SPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 830 ~G~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~--~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+|||.+... .+.+||+|+|++++|.... ....+++.++.++|+.+|+...+.+.
T Consensus 81 ig~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~~ 141 (211)
T cd00768 81 IGPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVFV 141 (211)
T ss_pred EcceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 99999996543 2346899999999997653 25689999999999999974224543
No 496
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.13 E-value=4.2e-11 Score=145.53 Aligned_cols=154 Identities=19% Similarity=0.304 Sum_probs=93.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------------------c----hhHHHH
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------------------L----PVNDRI 427 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----------------------------~----~~~~~~ 427 (1196)
..+|+. +.||+|++|+||+|+.+.+|+.||||+++..-.. . +..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 7899999999999999977999999999743100 0 111222
Q ss_pred HHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CH
Q 000993 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TL 506 (1196)
Q Consensus 428 ~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL 506 (1196)
.+|+...+.. +|+.++...|...... ......| .....-++|||||.| .+
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v-~VP~v~~--------------------------d~st~~VLvmE~i~G~~l 248 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDML-YVPEVYW--------------------------DYCSETVMVMERMYGIPV 248 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCe-ecceeec--------------------------ccCCCceEEEeeecCccH
Confidence 3333333322 2333333222110000 0000000 012234799999986 77
Q ss_pred HHH--HhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhcc
Q 000993 507 RQV--FESYD----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLK 570 (1196)
Q Consensus 507 ~~~--l~~~~----~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~ 570 (1196)
.++ +...+ .+.+..+..++.||+ ..|++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 249 SDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 653 33322 233444445555554 58999999999999999888 89999999998664
No 497
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only, and an additional C-terminal zinc-binding domain specific to this subfamily of aaRSs.
Probab=99.11 E-value=5.3e-10 Score=120.38 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=90.9
Q ss_pred CCCCceEEEEEcCCCc------hHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEE
Q 000993 1087 NEAGTSVLVCSRGGGG------LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVK 1160 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~~------~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~ 1160 (1196)
..+|.+|+|++.+ .. ...+|.++++.||+.|++|+++.....++++++++|+.+|+|++|+||++|+++|+|+
T Consensus 7 ~iAP~qVvIipi~-~~~~~~~~~~~~a~~i~~~Lr~~Girv~~D~r~~~s~g~K~~~ae~~GvP~~I~IG~~Ele~g~V~ 85 (202)
T cd00862 7 RVAPIQVVIVPIG-IKDEKREEVLEAADELAERLKAAGIRVHVDDRDNYTPGWKFNDWELKGVPLRIEIGPRDLEKNTVV 85 (202)
T ss_pred hhcCceEEEEEec-CCccchHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHhHHHHHHHhCCCCEEEEECcchhhCCEEE
Confidence 3578899999985 33 6778999999999999999998874339999999999999999999999999999999
Q ss_pred EEEcCCCcccccchHHHHHHHHHHHHhhc
Q 000993 1161 VRHLDVKKEKEVQRESLVRFLLDAIASQF 1189 (1196)
Q Consensus 1161 vk~l~~g~q~~v~~~el~~~l~~~l~~~~ 1189 (1196)
|++++++++..++++++++.+.+.++.+-
T Consensus 86 v~~Rd~~ek~~v~~~el~~~i~~ll~~i~ 114 (202)
T cd00862 86 IVRRDTGEKKTVPLAELVEKVPELLDEIQ 114 (202)
T ss_pred EEEecCCcceEEEHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887776543
No 498
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=99.11 E-value=5.1e-10 Score=105.08 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=81.0
Q ss_pred CceEEEEEcCCC---chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1090 GTSVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1090 ~~~vlv~~~~~~---~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
|.+++|++.+ + .....|++++++||+.|++|++... .+++++++++|++.|+++++++|++|+.+++++++++.+
T Consensus 1 p~~v~ii~~~-~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~-~~~~~k~~~~a~~~g~~~~iiig~~e~~~~~v~i~~~~~ 78 (94)
T cd00738 1 PIDVAIVPLT-DPRVEAREYAQKLLNALLANGIRVLYDDR-ERKIGKKFREADLRGVPFAVVVGEDELENGKVTVKSRDT 78 (94)
T ss_pred CeEEEEEECC-CCcHHHHHHHHHHHHHHHHCCCEEEecCC-CcCHhHHHHHHHhCCCCEEEEECCChhhCCEEEEEECCC
Confidence 3578888875 5 6788999999999999999998776 579999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l 1181 (1196)
+++..++++++.+.|
T Consensus 79 ~~~~~~~~~~~~~~i 93 (94)
T cd00738 79 GESETLHVDELPEFL 93 (94)
T ss_pred CceeEEEHHHHHhhc
Confidence 999999999887654
No 499
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.08 E-value=8.3e-10 Score=117.77 Aligned_cols=138 Identities=13% Similarity=0.118 Sum_probs=96.9
Q ss_pred eeeccCCcEEEEEEEEcc------CCcEEEEEEEecCCCC--------------------chhHHHHH----HHHHHHHh
Q 000993 387 QPLGHGGFGHVVLCKNKL------DGRHYAVKKIRLKDKS--------------------LPVNDRIL----REVATLSR 436 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~------~g~~vAVK~i~~~~~~--------------------~~~~~~~~----~Ev~iL~~ 436 (1196)
..||.|--+.||.|.... .+..+|||+.+....+ ......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 3579999988643110 01112233 79999988
Q ss_pred cCC--CCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCC-HHHHHhhc
Q 000993 437 LQH--QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESY 513 (1196)
Q Consensus 437 L~H--pnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~ 513 (1196)
+.. -++...+.+ ..-+|||||++++ +..-.-+.
T Consensus 83 l~~~Gv~vP~pi~~--------------------------------------------~~~~lvME~Ig~~~~~~~~Lkd 118 (197)
T cd05146 83 MQKAGIPCPEVVVL--------------------------------------------KKHVLVMSFIGDDQVPAPKLKD 118 (197)
T ss_pred HHHcCCCCCeEEEe--------------------------------------------cCCEEEEEEcCCCCccchhhhc
Confidence 843 345554432 1237999999763 32211122
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 514 DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 514 ~~l~e~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
..++.+....+..+++.+|..| |..||+|+||++.|||++ ++.+.|+|||.|-..
T Consensus 119 ~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 119 AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 3455666778889999999999 899999999999999997 578999999988643
No 500
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.08 E-value=2.8e-10 Score=118.57 Aligned_cols=126 Identities=16% Similarity=0.127 Sum_probs=92.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee-eeeeeeecCccccCCCCcCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR-YYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~-l~~~~~e~~~~~~~~~~~~~ 464 (1196)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+.++++ ++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--------------- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--------------- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe---------------
Confidence 467899999999999875 88899998753321 1224678999999986655543 33221
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC---
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI--- 540 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI--- 540 (1196)
....++||||++| ++... ......++.+++.+|+.||+.++
T Consensus 63 ---------------------------~~~~~lv~e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~ 107 (170)
T cd05151 63 ---------------------------PETGVLITEFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDL 107 (170)
T ss_pred ---------------------------CCCCeEEEEecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCc
Confidence 1113799999987 54432 01123456799999999999985
Q ss_pred --cccCCCcCcEEecCCCCeEEeccCcch
Q 000993 541 --IHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 541 --iHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
+|+|++|.||+++ ++.++++|||.+.
T Consensus 108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred eeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 9999999999999 6789999999986
Done!