Query 000993
Match_columns 1196
No_of_seqs 730 out of 4284
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 05:21:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3net_A Histidyl-tRNA synthetas 100.0 1.6E-69 5.3E-74 651.0 36.2 413 738-1184 12-463 (465)
2 4g85_A Histidine-tRNA ligase, 100.0 7.9E-69 2.7E-73 654.8 41.5 430 736-1186 65-514 (517)
3 3lc0_A Histidyl-tRNA synthetas 100.0 4.1E-69 1.4E-73 643.0 37.3 404 739-1177 30-446 (456)
4 4g84_A Histidine--tRNA ligase, 100.0 5.1E-68 1.8E-72 641.2 39.5 428 738-1186 14-461 (464)
5 1wu7_A Histidyl-tRNA synthetas 100.0 1.4E-61 4.8E-66 579.4 39.9 409 739-1186 7-426 (434)
6 3od1_A ATP phosphoribosyltrans 100.0 5.8E-61 2E-65 563.7 38.0 375 737-1156 9-396 (400)
7 4e51_A Histidine--tRNA ligase; 100.0 1.5E-59 5.1E-64 563.7 35.2 397 738-1185 32-458 (467)
8 1h4v_B Histidyl-tRNA synthetas 100.0 6.3E-56 2.2E-60 528.9 41.7 398 739-1185 4-420 (421)
9 1htt_A Histidyl-tRNA synthetas 100.0 1.7E-56 5.9E-61 534.1 31.0 397 739-1185 5-422 (423)
10 3rac_A Histidine-tRNA ligase; 100.0 2.3E-54 7.9E-59 503.2 25.8 304 739-1079 24-364 (373)
11 1qe0_A Histidyl-tRNA synthetas 100.0 1.8E-52 6.1E-57 499.1 29.8 395 739-1182 3-419 (420)
12 3hyh_A Carbon catabolite-derep 100.0 5.1E-53 1.7E-57 473.6 23.0 260 373-691 5-268 (275)
13 4g31_A Eukaryotic translation 100.0 1.3E-52 4.6E-57 477.2 25.3 284 377-694 1-288 (299)
14 1z7m_A ATP phosphoribosyltrans 100.0 7.7E-53 2.6E-57 486.1 23.0 298 739-1079 23-335 (344)
15 4aw0_A HPDK1, 3-phosphoinositi 100.0 6E-53 2.1E-57 479.7 20.4 263 378-697 29-302 (311)
16 3fpq_A Serine/threonine-protei 100.0 1.3E-51 4.5E-56 465.9 27.7 254 383-691 28-288 (290)
17 4b9d_A Serine/threonine-protei 100.0 2.4E-52 8.2E-57 482.3 21.8 255 380-692 23-283 (350)
18 4fih_A Serine/threonine-protei 100.0 9.3E-52 3.2E-56 476.7 25.0 253 381-692 74-330 (346)
19 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-51 4.9E-56 468.1 18.3 258 381-697 24-293 (304)
20 4fie_A Serine/threonine-protei 100.0 1.5E-50 5E-55 477.7 25.5 253 381-692 151-407 (423)
21 4b99_A Mitogen-activated prote 100.0 1.2E-49 4.1E-54 469.8 28.1 267 381-692 54-351 (398)
22 4g3f_A NF-kappa-beta-inducing 100.0 2E-50 6.8E-55 464.2 20.4 249 380-686 57-310 (336)
23 3omv_A RAF proto-oncogene seri 100.0 3.6E-48 1.2E-52 441.1 23.9 250 380-686 35-294 (307)
24 4asz_A BDNF/NT-3 growth factor 100.0 7.1E-48 2.4E-52 438.0 23.6 247 381-685 13-282 (299)
25 4gt4_A Tyrosine-protein kinase 100.0 1.6E-47 5.3E-52 436.9 24.9 250 380-686 25-300 (308)
26 4aoj_A High affinity nerve gro 100.0 3.5E-47 1.2E-51 438.0 26.5 249 380-686 40-313 (329)
27 3v5w_A G-protein coupled recep 100.0 3.8E-47 1.3E-51 467.5 25.3 259 379-697 187-461 (689)
28 4ase_A Vascular endothelial gr 100.0 1.5E-46 5.2E-51 436.3 21.7 252 380-686 63-341 (353)
29 4f9c_A Cell division cycle 7-r 100.0 5.3E-46 1.8E-50 433.9 25.2 267 380-693 20-360 (361)
30 3uto_A Twitchin; kinase, muscl 100.0 2.8E-45 9.5E-50 452.5 26.5 258 377-693 153-418 (573)
31 1usy_A ATP phosphoribosyltrans 100.0 9E-46 3.1E-50 414.9 15.8 262 756-1074 4-273 (275)
32 3hmm_A TGF-beta receptor type- 100.0 3.4E-44 1.2E-48 409.2 20.0 253 381-686 3-291 (303)
33 3fe3_A MAP/microtubule affinit 100.0 4.6E-43 1.6E-47 404.4 27.9 255 379-692 13-271 (328)
34 3o0g_A Cell division protein k 100.0 2E-42 6.9E-47 390.8 26.9 258 380-692 1-289 (292)
35 3qd2_B Eukaryotic translation 100.0 1.3E-42 4.5E-47 397.8 25.3 310 377-692 2-332 (332)
36 1o6l_A RAC-beta serine/threoni 100.0 2.3E-42 7.9E-47 400.0 27.0 259 380-697 4-272 (337)
37 2yab_A Death-associated protei 100.0 5.4E-42 1.9E-46 400.6 28.7 262 377-695 8-282 (361)
38 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-42 4.6E-47 404.6 21.9 261 378-697 20-292 (353)
39 3niz_A Rhodanese family protei 100.0 4.4E-42 1.5E-46 392.6 25.2 262 377-694 17-309 (311)
40 3zgw_A Maternal embryonic leuc 100.0 3E-42 1E-46 400.6 23.5 256 378-691 7-266 (347)
41 1fot_A TPK1 delta, CAMP-depend 100.0 5.1E-42 1.8E-46 393.9 24.7 257 379-697 4-270 (318)
42 1ob3_A PFPK5, cell division co 100.0 6.3E-42 2.1E-46 386.3 24.7 257 380-692 1-287 (288)
43 3fxz_A Serine/threonine-protei 100.0 1.2E-41 4E-46 386.6 26.5 255 379-692 18-276 (297)
44 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4E-42 1.4E-46 396.0 22.4 265 375-694 28-327 (329)
45 3soa_A Calcium/calmodulin-depe 100.0 9.4E-42 3.2E-46 409.2 26.5 260 376-691 6-273 (444)
46 4dc2_A Protein kinase C IOTA t 100.0 1.1E-41 3.6E-46 402.6 26.6 262 378-698 49-331 (396)
47 3rp9_A Mitogen-activated prote 100.0 1.1E-41 3.9E-46 410.2 26.9 281 379-694 51-405 (458)
48 2bdw_A Hypothetical protein K1 100.0 1.5E-41 5.2E-46 397.0 25.7 258 377-691 25-290 (362)
49 3oz6_A Mitogen-activated prote 100.0 1.3E-41 4.5E-46 400.7 25.0 276 378-692 6-335 (388)
50 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-41 4E-46 396.2 24.2 257 379-697 39-305 (350)
51 3a8x_A Protein kinase C IOTA t 100.0 3E-41 1E-45 391.9 27.6 260 379-697 7-287 (345)
52 1xjd_A Protein kinase C, theta 100.0 6.9E-42 2.4E-46 397.3 21.9 261 378-697 14-281 (345)
53 3tki_A Serine/threonine-protei 100.0 1.1E-41 3.6E-46 391.9 23.0 261 378-692 4-268 (323)
54 2eue_A Carbon catabolite derep 100.0 6.9E-42 2.4E-46 382.8 20.5 261 373-692 5-269 (275)
55 4fr4_A YANK1, serine/threonine 100.0 2.8E-41 9.4E-46 397.6 26.2 262 377-697 11-283 (384)
56 2i0e_A Protein kinase C-beta I 100.0 1.6E-41 5.6E-46 395.4 23.8 260 379-697 18-288 (353)
57 2y0a_A Death-associated protei 100.0 4.2E-41 1.4E-45 387.3 26.8 260 379-695 9-281 (326)
58 3ttj_A Mitogen-activated prote 100.0 2.5E-41 8.6E-46 408.0 25.4 261 379-692 60-362 (464)
59 3g33_A Cell division protein k 100.0 5.9E-41 2E-45 381.8 27.0 263 379-693 7-304 (308)
60 4agu_A Cyclin-dependent kinase 100.0 5.4E-41 1.9E-45 382.1 26.1 259 380-693 2-292 (311)
61 2pmi_A Negative RE, cyclin-dep 100.0 2.5E-41 8.7E-46 387.3 23.4 259 380-694 4-302 (317)
62 1tki_A Titin; serine kinase, m 100.0 1.9E-41 6.5E-46 389.5 22.3 254 379-692 3-264 (321)
63 2r5t_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 394.6 25.3 262 377-697 34-305 (373)
64 4aw2_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 406.0 21.3 264 380-697 73-350 (437)
65 3mwu_A Calmodulin-domain prote 100.0 2.4E-41 8.1E-46 410.7 22.9 261 374-692 15-283 (486)
66 3p1a_A MYT1 kinase, membrane-a 100.0 7.4E-41 2.5E-45 382.4 25.4 254 375-691 51-310 (311)
67 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.6E-42 1.2E-46 398.3 14.5 256 377-691 5-264 (336)
68 3kk8_A Calcium/calmodulin depe 100.0 1.4E-40 4.7E-45 373.4 26.8 259 378-693 3-269 (284)
69 1cm8_A Phosphorylated MAP kina 100.0 8E-41 2.7E-45 391.6 25.1 262 379-693 23-315 (367)
70 4ejn_A RAC-alpha serine/threon 100.0 4.3E-41 1.5E-45 404.0 23.2 260 379-697 146-416 (446)
71 3n9x_A Phosphotransferase; mal 100.0 1.8E-40 6E-45 397.1 28.2 284 376-694 21-370 (432)
72 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.3E-45 383.5 26.0 260 379-697 15-288 (327)
73 3v8s_A RHO-associated protein 100.0 1.9E-41 6.6E-46 402.3 19.3 263 380-697 68-341 (410)
74 3lij_A Calcium/calmodulin depe 100.0 8.4E-41 2.9E-45 406.7 25.2 258 377-692 33-298 (494)
75 3mi9_A Cell division protein k 100.0 1.1E-40 3.6E-45 387.0 24.4 271 379-692 15-318 (351)
76 3uc3_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 389.1 25.0 258 374-691 13-280 (361)
77 3c0i_A Peripheral plasma membr 100.0 4.5E-41 1.5E-45 391.2 20.7 258 378-692 21-293 (351)
78 3is5_A Calcium-dependent prote 100.0 1.6E-40 5.4E-45 374.4 24.4 258 375-691 16-284 (285)
79 3gni_B Strad alpha; kinase fol 100.0 1.1E-40 3.7E-45 392.9 23.9 267 380-694 24-342 (389)
80 2vd5_A DMPK protein; serine/th 100.0 3.8E-41 1.3E-45 400.0 19.9 263 380-697 60-339 (412)
81 2zv2_A Calcium/calmodulin-depe 100.0 8E-41 2.7E-45 378.9 21.3 257 379-690 11-297 (298)
82 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-40 8.7E-45 403.5 26.9 259 376-692 31-308 (504)
83 2r3i_A Cell division protein k 100.0 3.8E-40 1.3E-44 372.7 26.1 259 380-693 2-291 (299)
84 1t4h_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 369.7 27.8 256 381-691 26-288 (290)
85 3mtl_A Cell division protein k 100.0 6E-41 2E-45 385.4 19.3 258 380-693 1-289 (324)
86 3nyv_A Calmodulin-domain prote 100.0 7.2E-41 2.5E-45 406.0 20.7 258 377-692 22-288 (484)
87 1x8b_A WEE1HU, WEE1-like prote 100.0 4E-40 1.4E-44 368.9 25.1 254 376-692 6-286 (289)
88 2a2a_A Death-associated protei 100.0 5.5E-40 1.9E-44 376.5 26.6 262 377-695 8-282 (321)
89 2w4o_A Calcium/calmodulin-depe 100.0 4.1E-40 1.4E-44 382.9 25.8 255 378-693 50-313 (349)
90 2j3l_A Prolyl-tRNA synthetase; 100.0 2.2E-40 7.4E-45 409.3 23.5 415 739-1187 34-566 (572)
91 1kob_A Twitchin; kinase, intra 100.0 5.6E-40 1.9E-44 387.1 26.0 258 376-692 46-311 (387)
92 3llt_A Serine/threonine kinase 100.0 4.4E-40 1.5E-44 383.0 24.6 251 378-690 32-360 (360)
93 1zy4_A Serine/threonine-protei 100.0 1.2E-39 4E-44 368.1 26.9 288 377-695 2-293 (303)
94 1ua2_A CAK, cell division prot 100.0 3.9E-40 1.3E-44 382.1 23.3 260 378-692 7-298 (346)
95 2xrw_A Mitogen-activated prote 100.0 5.9E-40 2E-44 384.6 25.0 261 379-692 23-325 (371)
96 4aaa_A Cyclin-dependent kinase 100.0 2.8E-40 9.7E-45 380.5 21.4 260 379-693 23-314 (331)
97 3fme_A Dual specificity mitoge 100.0 3.3E-40 1.1E-44 371.1 21.3 257 380-692 6-273 (290)
98 3dbq_A Dual specificity protei 100.0 5.1E-40 1.7E-44 380.7 23.4 257 381-692 9-280 (343)
99 2fst_X Mitogen-activated prote 100.0 3.2E-40 1.1E-44 386.5 21.9 261 380-693 28-319 (367)
100 1evl_A Threonyl-tRNA synthetas 100.0 7.9E-40 2.7E-44 387.2 25.1 357 735-1189 13-395 (401)
101 2c30_A Serine/threonine-protei 100.0 1.8E-39 6.2E-44 372.8 27.1 252 382-692 46-301 (321)
102 2yex_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 366.9 21.8 261 379-693 5-269 (276)
103 2zmd_A Dual specificity protei 100.0 7.5E-40 2.6E-44 386.5 24.1 258 381-693 56-328 (390)
104 3fdn_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 367.0 22.4 252 379-691 7-263 (279)
105 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-39 4.5E-44 364.4 24.4 253 379-691 7-267 (277)
106 2y94_A 5'-AMP-activated protei 100.0 3.5E-40 1.2E-44 398.5 21.2 256 377-691 12-272 (476)
107 2ac3_A MAP kinase-interacting 100.0 9.2E-40 3.2E-44 372.8 23.5 268 376-693 7-303 (316)
108 3kn6_A Ribosomal protein S6 ki 100.0 3.6E-40 1.2E-44 379.5 20.2 255 377-692 4-277 (325)
109 3ork_A Serine/threonine protei 100.0 4.1E-40 1.4E-44 375.9 20.5 264 377-689 8-277 (311)
110 1u5q_A Serine/threonine protei 100.0 1.2E-39 4.2E-44 378.8 24.8 252 381-692 54-312 (348)
111 1phk_A Phosphorylase kinase; g 100.0 3.5E-39 1.2E-43 364.6 27.8 264 377-696 13-294 (298)
112 4exu_A Mitogen-activated prote 100.0 1.6E-39 5.4E-44 380.9 25.8 261 379-693 40-331 (371)
113 3qyz_A Mitogen-activated prote 100.0 1.9E-39 6.4E-44 379.0 26.2 263 381-692 27-320 (364)
114 2qr7_A Ribosomal protein S6 ki 100.0 4.2E-40 1.4E-44 381.8 20.3 253 377-691 18-283 (342)
115 3kvw_A DYRK2, dual specificity 100.0 2.3E-39 8E-44 387.1 27.0 256 375-692 91-415 (429)
116 3pfq_A PKC-B, PKC-beta, protei 100.0 7.9E-40 2.7E-44 411.9 23.1 260 379-697 339-609 (674)
117 3dls_A PAS domain-containing s 100.0 5.1E-40 1.8E-44 379.9 19.2 251 377-692 20-281 (335)
118 2acx_A G protein-coupled recep 100.0 8.9E-40 3E-44 401.1 22.3 258 380-697 183-456 (576)
119 1j1b_A Glycogen synthase kinas 100.0 2.5E-39 8.6E-44 385.8 24.9 257 380-692 53-343 (420)
120 3p86_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 367.4 26.1 248 380-686 36-292 (309)
121 3bhy_A Death-associated protei 100.0 1.9E-39 6.4E-44 364.0 22.1 256 380-692 4-272 (283)
122 3hko_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 376.9 20.6 263 380-693 25-338 (345)
123 3coi_A Mitogen-activated prote 100.0 5E-39 1.7E-43 373.5 26.0 259 380-692 23-312 (353)
124 3eb0_A Putative uncharacterize 100.0 3.9E-39 1.3E-43 379.1 25.4 288 380-693 6-329 (383)
125 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.8E-39 6.1E-44 397.2 23.2 260 379-697 183-460 (543)
126 3an0_A Dual specificity mitoge 100.0 2.1E-39 7.3E-44 374.2 22.4 256 379-691 49-316 (340)
127 2b9h_A MAP kinase FUS3, mitoge 100.0 6.4E-39 2.2E-43 371.6 26.4 273 379-693 9-313 (353)
128 2x4f_A Myosin light chain kina 100.0 3.5E-39 1.2E-43 378.6 24.1 255 381-694 87-351 (373)
129 2y7j_A Phosphorylase B kinase 100.0 7.8E-39 2.7E-43 374.4 27.0 257 379-691 92-365 (365)
130 2jam_A Calcium/calmodulin-depe 100.0 3.5E-39 1.2E-43 366.4 23.1 256 377-692 5-268 (304)
131 2j7t_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 362.7 25.6 258 380-694 18-284 (302)
132 3i6u_A CDS1, serine/threonine- 100.0 1E-39 3.5E-44 389.0 19.5 259 379-694 133-408 (419)
133 4eqm_A Protein kinase; transfe 100.0 6.3E-39 2.2E-43 363.4 25.0 254 378-686 8-268 (294)
134 3lm5_A Serine/threonine-protei 100.0 2.6E-39 8.7E-44 372.3 22.0 273 366-695 12-297 (327)
135 3cok_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 363.9 19.7 256 379-693 9-270 (278)
136 1nxk_A MAP kinase-activated pr 100.0 3E-39 1E-43 382.7 23.2 256 376-691 56-327 (400)
137 4e7w_A Glycogen synthase kinas 100.0 3.7E-39 1.3E-43 381.0 23.8 258 379-693 38-329 (394)
138 2vgo_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 362.9 22.1 252 379-691 12-268 (284)
139 2w5a_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 360.8 22.3 257 380-692 5-274 (279)
140 2i6l_A Mitogen-activated prote 100.0 4.7E-39 1.6E-43 366.3 23.3 278 376-694 6-314 (320)
141 3eqc_A Dual specificity mitoge 100.0 3.1E-39 1.1E-43 376.1 22.2 256 380-694 32-333 (360)
142 2h6d_A 5'-AMP-activated protei 100.0 3.6E-39 1.2E-43 360.4 21.0 255 379-692 9-268 (276)
143 1blx_A Cyclin-dependent kinase 100.0 1.3E-38 4.3E-43 364.7 25.9 264 378-693 8-304 (326)
144 1wak_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 377.9 22.8 257 377-691 33-397 (397)
145 3e3p_A Protein kinase, putativ 100.0 3.7E-39 1.3E-43 374.7 21.5 265 377-693 19-322 (360)
146 2owb_A Serine/threonine-protei 100.0 6.5E-39 2.2E-43 370.1 22.6 257 377-692 37-298 (335)
147 2rku_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 361.0 23.3 255 378-691 12-271 (294)
148 3byv_A Rhoptry kinase; malaria 100.0 2.1E-40 7.2E-45 389.1 10.0 271 381-694 73-368 (377)
149 3pg1_A Mitogen-activated prote 100.0 1E-38 3.6E-43 371.6 24.0 261 380-692 21-323 (362)
150 1z57_A Dual specificity protei 100.0 1E-38 3.5E-43 366.3 23.3 254 378-693 11-336 (339)
151 3nsz_A CK II alpha, casein kin 100.0 1.8E-38 6.1E-43 364.4 25.0 254 379-694 34-328 (330)
152 1vzo_A Ribosomal protein S6 ki 100.0 5.6E-39 1.9E-43 374.1 21.1 262 379-697 52-333 (355)
153 3com_A Serine/threonine-protei 100.0 2.9E-38 1E-42 360.0 26.5 255 379-693 27-286 (314)
154 3rgf_A Cyclin-dependent kinase 100.0 5.8E-39 2E-43 380.5 21.3 259 381-693 20-341 (405)
155 2vx3_A Dual specificity tyrosi 100.0 1.5E-38 5.2E-43 373.9 24.5 256 376-693 49-380 (382)
156 2ycf_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 370.2 17.9 260 378-694 7-283 (322)
157 2wei_A Calmodulin-domain prote 100.0 1.3E-38 4.3E-43 358.8 22.4 259 376-692 17-283 (287)
158 3kul_A Ephrin type-A receptor 100.0 2.4E-38 8.2E-43 364.1 24.0 253 378-686 46-307 (325)
159 3q60_A ROP5B; pseudokinase, tr 100.0 1E-39 3.4E-44 382.3 12.6 282 381-696 62-363 (371)
160 4euu_A Serine/threonine-protei 100.0 2E-38 6.7E-43 363.0 22.7 254 379-687 7-304 (319)
161 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-39 1.9E-43 365.8 17.9 258 380-685 9-275 (310)
162 3vhe_A Vascular endothelial gr 100.0 1.4E-38 4.6E-43 369.8 21.5 252 380-686 21-349 (359)
163 3a7i_A MST3 kinase, serine/thr 100.0 4.6E-38 1.6E-42 356.8 25.2 252 380-691 21-276 (303)
164 2vwi_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 363.4 17.2 267 377-694 11-296 (303)
165 2x7f_A TRAF2 and NCK-interacti 100.0 5E-38 1.7E-42 360.1 25.3 262 380-694 23-295 (326)
166 2eu9_A Dual specificity protei 100.0 3.3E-38 1.1E-42 364.7 24.0 257 377-695 15-343 (355)
167 3ugc_A Tyrosine-protein kinase 100.0 3.6E-38 1.2E-42 356.3 23.4 254 379-686 8-285 (295)
168 2i4l_A Proline-tRNA ligase; al 100.0 1E-40 3.5E-45 400.4 2.4 372 739-1181 54-457 (458)
169 2wtk_C Serine/threonine-protei 100.0 1.6E-38 5.6E-43 360.3 20.2 260 379-692 3-270 (305)
170 2psq_A Fibroblast growth facto 100.0 3.9E-38 1.3E-42 369.2 23.8 250 380-686 80-358 (370)
171 2pml_X PFPK7, Ser/Thr protein 100.0 1E-38 3.5E-43 369.2 18.5 265 377-700 27-337 (348)
172 3l9p_A Anaplastic lymphoma kin 100.0 2.6E-38 9E-43 370.2 21.9 251 380-687 70-340 (367)
173 3cek_A Dual specificity protei 100.0 3.9E-38 1.3E-42 359.3 22.4 259 380-693 27-300 (313)
174 4hcu_A Tyrosine-protein kinase 100.0 8.6E-38 2.9E-42 348.4 24.6 245 381-686 10-260 (269)
175 2dyl_A Dual specificity mitoge 100.0 5.5E-38 1.9E-42 357.8 23.4 257 380-692 24-290 (318)
176 2clq_A Mitogen-activated prote 100.0 7.2E-38 2.4E-42 353.0 23.6 257 380-693 21-286 (295)
177 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.9E-38 3.1E-42 347.8 23.9 246 380-686 7-258 (268)
178 3qup_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 360.6 21.6 266 380-695 22-308 (323)
179 2izr_A Casein kinase I isoform 100.0 4.4E-38 1.5E-42 362.0 21.7 253 380-685 8-274 (330)
180 3lb7_A RAF proto-oncogene seri 100.0 9.4E-38 3.2E-42 356.3 24.1 251 380-687 35-295 (307)
181 1luf_A Muscle-specific tyrosin 100.0 9.5E-38 3.2E-42 360.1 24.2 250 380-686 46-329 (343)
182 3kmu_A ILK, integrin-linked ki 100.0 1.1E-37 3.6E-42 346.6 23.7 248 378-686 7-264 (271)
183 1csn_A Casein kinase-1; phosph 100.0 2.5E-37 8.7E-42 349.0 26.8 255 379-686 8-277 (298)
184 3gen_A Tyrosine-protein kinase 100.0 1.7E-37 5.7E-42 348.4 25.0 246 380-686 23-274 (283)
185 1q8y_A SR protein kinase; tran 100.0 4.9E-38 1.7E-42 366.7 21.4 255 380-692 18-340 (373)
186 3cbl_A C-FES, proto-oncogene t 100.0 3.7E-38 1.3E-42 370.2 19.8 250 380-686 113-368 (377)
187 4e5w_A Tyrosine-protein kinase 100.0 2E-37 6.9E-42 350.8 24.9 254 380-686 20-296 (302)
188 4fvq_A Tyrosine-protein kinase 100.0 4.9E-38 1.7E-42 353.6 19.6 243 380-686 7-269 (289)
189 3aln_A Dual specificity mitoge 100.0 4.5E-38 1.5E-42 361.1 19.6 257 380-693 21-293 (327)
190 2h34_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 353.1 24.3 255 376-686 29-290 (309)
191 3op5_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 363.1 23.3 261 380-685 34-322 (364)
192 1mp8_A Focal adhesion kinase 1 100.0 1.1E-37 3.6E-42 350.2 21.1 248 380-686 14-270 (281)
193 2iwi_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 357.3 19.1 253 376-694 26-292 (312)
194 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-37 5E-42 353.7 21.4 250 380-686 22-305 (314)
195 4f0f_A Serine/threonine-protei 100.0 2.7E-37 9.3E-42 347.4 23.3 247 380-686 18-283 (287)
196 3poz_A Epidermal growth factor 100.0 1.5E-37 5.1E-42 357.6 21.5 250 379-686 13-272 (327)
197 3a99_A Proto-oncogene serine/t 100.0 8.6E-38 3E-42 358.4 19.0 252 377-694 39-302 (320)
198 2wqm_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 348.5 26.0 252 378-686 29-291 (310)
199 3dtc_A Mitogen-activated prote 100.0 3.6E-37 1.2E-41 343.2 23.4 245 380-686 6-267 (271)
200 2a19_B Interferon-induced, dou 100.0 2.1E-37 7.1E-42 346.9 21.5 260 377-687 7-269 (284)
201 1rjb_A FL cytokine receptor; k 100.0 1.8E-37 6.1E-42 358.5 21.3 251 380-686 44-328 (344)
202 3tt0_A Basic fibroblast growth 100.0 9E-37 3.1E-41 358.9 26.9 250 380-686 68-346 (382)
203 1t46_A HOMO sapiens V-KIT hard 100.0 3.4E-37 1.2E-41 350.5 22.5 251 380-686 22-301 (313)
204 1xbb_A Tyrosine-protein kinase 100.0 3.9E-37 1.3E-41 347.4 22.2 250 381-686 16-273 (291)
205 2xir_A Vascular endothelial gr 100.0 2.4E-37 8.3E-42 352.2 20.5 252 380-686 26-304 (316)
206 2eva_A TAK1 kinase - TAB1 chim 100.0 5.7E-37 2E-41 349.5 23.1 240 380-686 7-257 (307)
207 2v62_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 356.9 21.6 262 380-686 36-322 (345)
208 2qol_A Ephrin receptor; recept 100.0 2.8E-37 9.7E-42 362.3 20.8 253 378-686 42-303 (373)
209 3soc_A Activin receptor type-2 100.0 2E-37 6.9E-42 355.7 19.1 252 380-686 23-312 (322)
210 1qcf_A Haematopoetic cell kina 100.0 1.1E-36 3.8E-41 366.6 26.3 244 380-685 187-437 (454)
211 3fhr_A MAP kinase-activated pr 100.0 2.7E-37 9.2E-42 357.0 20.0 257 376-692 23-294 (336)
212 3kfa_A Tyrosine-protein kinase 100.0 4.8E-37 1.7E-41 345.3 21.4 247 380-686 12-265 (288)
213 3brb_A Proto-oncogene tyrosine 100.0 7.2E-37 2.4E-41 348.7 23.1 256 380-686 33-302 (313)
214 1p4o_A Insulin-like growth fac 100.0 7E-37 2.4E-41 349.9 23.1 250 380-686 24-293 (322)
215 1k9a_A Carboxyl-terminal SRC k 100.0 5.9E-37 2E-41 368.5 23.5 241 380-686 192-439 (450)
216 3kex_A Receptor tyrosine-prote 100.0 1.8E-37 6.3E-42 356.3 18.3 249 380-686 12-270 (325)
217 3lxl_A Tyrosine-protein kinase 100.0 5.9E-37 2E-41 352.0 22.4 253 380-686 22-297 (327)
218 3og7_A AKAP9-BRAF fusion prote 100.0 7.1E-37 2.4E-41 345.1 22.7 250 380-686 23-282 (289)
219 3q4u_A Activin receptor type-1 100.0 6E-37 2E-41 346.5 22.0 253 379-686 6-296 (301)
220 3t9t_A Tyrosine-protein kinase 100.0 1.3E-36 4.5E-41 337.6 24.4 245 381-686 8-258 (267)
221 2i1m_A Macrophage colony-stimu 100.0 6.1E-37 2.1E-41 352.4 22.4 251 380-686 45-320 (333)
222 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-36 4.5E-41 342.8 24.7 256 379-686 7-274 (296)
223 1fvr_A Tyrosine-protein kinase 100.0 1.2E-36 4.1E-41 349.4 24.4 249 378-686 22-294 (327)
224 3p23_A Serine/threonine-protei 100.0 4E-37 1.4E-41 368.0 21.1 256 381-694 24-292 (432)
225 3pls_A Macrophage-stimulating 100.0 1.6E-36 5.4E-41 342.5 24.6 252 381-686 21-281 (298)
226 2jii_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 352.9 24.4 266 381-686 42-330 (352)
227 2buj_A Serine/threonine-protei 100.0 1E-36 3.6E-41 347.7 22.9 262 380-686 28-300 (317)
228 3ll6_A Cyclin G-associated kin 100.0 8.8E-37 3E-41 350.2 22.3 264 381-686 28-302 (337)
229 4hgt_A Casein kinase I isoform 100.0 1.7E-36 5.8E-41 341.6 24.1 255 380-686 8-274 (296)
230 3f66_A Hepatocyte growth facto 100.0 1.2E-36 4.3E-41 343.9 22.8 252 381-686 25-285 (298)
231 1mqb_A Ephrin type-A receptor 100.0 2.9E-36 9.8E-41 347.9 26.0 252 379-686 42-303 (333)
232 3cc6_A Protein tyrosine kinase 100.0 9E-37 3.1E-41 342.4 20.9 248 380-686 11-267 (281)
233 3lzb_A Epidermal growth factor 100.0 1.1E-36 3.7E-41 350.7 21.6 249 380-686 14-272 (327)
234 2yfx_A Tyrosine-protein kinase 100.0 1.2E-36 4.2E-41 349.3 21.9 252 380-688 29-300 (327)
235 2pvf_A Fibroblast growth facto 100.0 1.9E-36 6.6E-41 349.0 23.6 250 380-686 34-312 (334)
236 1opk_A P150, C-ABL, proto-onco 100.0 6E-37 2E-41 372.9 20.0 247 380-686 219-472 (495)
237 1u59_A Tyrosine-protein kinase 100.0 2.4E-36 8.2E-41 340.2 23.3 249 381-686 9-266 (287)
238 1qpc_A LCK kinase; alpha beta 100.0 2.7E-36 9.1E-41 337.9 22.6 243 381-685 13-262 (279)
239 3lxp_A Non-receptor tyrosine-p 100.0 2.6E-36 8.8E-41 345.7 22.8 253 381-686 30-304 (318)
240 1hc7_A Prolyl-tRNA synthetase; 100.0 4.6E-36 1.6E-40 360.0 25.6 325 740-1188 32-388 (477)
241 1byg_A CSK, protein (C-termina 100.0 1.6E-36 5.4E-41 339.8 20.1 241 380-686 20-267 (278)
242 3c1x_A Hepatocyte growth facto 100.0 1.2E-36 4E-41 357.1 19.8 252 381-686 89-349 (373)
243 2rio_A Serine/threonine-protei 100.0 2E-36 6.9E-41 362.3 21.4 254 381-693 15-303 (434)
244 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.3E-36 1.1E-40 362.3 23.0 245 380-686 183-434 (452)
245 4fl3_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 376.4 23.6 244 387-686 375-625 (635)
246 2qkw_B Protein kinase; three-h 100.0 3.4E-37 1.2E-41 353.1 12.9 252 378-686 36-309 (321)
247 2w1i_A JAK2; chromosomal rearr 100.0 6E-36 2.1E-40 343.7 22.1 253 380-686 40-316 (326)
248 4eut_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 359.4 17.0 252 380-686 8-303 (396)
249 1u46_A ACK-1, activated CDC42 100.0 2.6E-36 9E-41 339.5 17.9 252 380-686 17-278 (291)
250 3uim_A Brassinosteroid insensi 100.0 3E-37 1E-41 353.8 10.3 251 380-687 29-306 (326)
251 3g2f_A Bone morphogenetic prot 100.0 6.1E-36 2.1E-40 344.2 20.8 259 378-686 10-312 (336)
252 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.9E-36 6.4E-41 345.6 15.7 253 379-686 31-296 (319)
253 2ozo_A Tyrosine-protein kinase 100.0 1.2E-35 4.2E-40 370.3 24.3 249 381-686 335-592 (613)
254 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-35 4.1E-40 364.8 23.6 245 380-686 266-517 (535)
255 3mdy_A Bone morphogenetic prot 100.0 1.5E-35 5.1E-40 340.6 22.7 254 377-686 33-325 (337)
256 3a32_A Probable threonyl-tRNA 100.0 1.4E-36 5E-41 365.6 12.7 363 740-1188 37-449 (471)
257 3sv0_A Casein kinase I-like; t 100.0 6.4E-35 2.2E-39 353.1 25.9 255 379-685 5-271 (483)
258 2nru_A Interleukin-1 receptor- 100.0 1.6E-35 5.5E-40 336.3 19.2 245 385-686 35-300 (307)
259 1nyr_A Threonyl-tRNA synthetas 100.0 2.1E-36 7E-41 377.6 12.5 355 740-1187 259-641 (645)
260 1nj8_A Proline-tRNA synthetase 100.0 7.8E-35 2.7E-39 348.4 25.7 331 733-1188 19-382 (459)
261 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-35 5.5E-40 345.7 18.6 240 380-685 64-331 (365)
262 1qf6_A THRRS, threonyl-tRNA sy 100.0 2.1E-35 7.1E-40 366.7 18.9 356 738-1188 257-635 (642)
263 3m2w_A MAP kinase-activated pr 100.0 1E-34 3.5E-39 329.3 21.8 239 373-692 9-263 (299)
264 2j0j_A Focal adhesion kinase 1 100.0 7.5E-35 2.6E-39 365.6 22.4 248 380-686 389-645 (656)
265 1b6c_B TGF-B superfamily recep 100.0 1.8E-34 6.3E-39 332.5 23.0 253 379-686 40-330 (342)
266 2vuw_A Serine/threonine-protei 100.0 6.9E-36 2.4E-40 344.6 9.9 269 380-690 19-336 (336)
267 3gxj_A TGF-beta receptor type- 100.0 4.2E-36 1.4E-40 339.6 6.5 251 381-686 3-291 (303)
268 3qa8_A MGC80376 protein; kinas 100.0 1.2E-35 4E-40 368.3 9.8 263 378-692 11-304 (676)
269 3dzo_A Rhoptry kinase domain; 100.0 2.1E-35 7.1E-40 351.2 11.5 275 381-695 78-373 (413)
270 3uh0_A Threonyl-tRNA synthetas 100.0 3.9E-34 1.3E-38 341.5 20.2 350 738-1187 50-458 (460)
271 2pzi_A Probable serine/threoni 100.0 4.3E-34 1.5E-38 361.0 18.4 244 378-689 77-324 (681)
272 1nj1_A PROR, proline-tRNA synt 100.0 6.1E-33 2.1E-37 334.8 23.2 331 733-1188 52-415 (501)
273 3uqc_A Probable conserved tran 100.0 4.4E-33 1.5E-37 314.7 19.8 222 379-686 29-259 (286)
274 2zt5_A Glycyl-tRNA synthetase; 100.0 1.5E-30 5E-35 323.0 18.6 402 728-1186 73-657 (693)
275 1ati_A Glycyl-tRNA synthetase; 100.0 6.1E-29 2.1E-33 300.3 17.3 344 740-1185 27-503 (505)
276 4hvc_A Bifunctional glutamate/ 99.9 5.9E-27 2E-31 281.3 25.2 325 740-1189 49-416 (519)
277 4azs_A Methyltransferase WBDD; 99.9 3.2E-28 1.1E-32 300.3 13.7 186 386-631 239-434 (569)
278 3ial_A Prolyl-tRNA synthetase; 99.9 3.1E-25 1E-29 265.6 24.8 315 739-1177 42-398 (518)
279 3en9_A Glycoprotease, O-sialog 99.9 2.3E-23 8E-28 255.5 6.2 185 385-629 340-532 (540)
280 1zar_A RIO2 kinase; serine kin 99.8 2.1E-21 7.2E-26 218.7 10.1 133 382-567 91-240 (282)
281 3ikl_A DNA polymerase subunit 99.8 1.3E-18 4.5E-23 204.1 24.3 310 743-1187 94-449 (459)
282 1g5h_A Mitochondrial DNA polym 99.8 5E-20 1.7E-24 219.1 11.9 318 743-1186 52-438 (454)
283 1zth_A RIO1 serine protein kin 99.7 2.6E-18 8.8E-23 190.9 12.2 137 383-568 49-218 (258)
284 4gyi_A RIO2 kinase; protein ki 99.6 1.2E-15 4.1E-20 177.4 5.7 144 383-567 97-263 (397)
285 2dq3_A Seryl-tRNA synthetase; 99.5 2.2E-14 7.4E-19 169.3 11.2 143 741-888 161-324 (425)
286 2ebm_A RWD domain-containing p 99.4 9E-14 3.1E-18 137.5 8.2 87 16-104 37-123 (128)
287 2yz0_A Serine/threonine-protei 99.4 1.3E-13 4.6E-18 138.1 8.5 90 10-102 38-128 (138)
288 1nnh_A Asparaginyl-tRNA synthe 99.4 9.1E-13 3.1E-17 148.4 13.5 120 748-877 11-141 (294)
289 2day_A Ring finger protein 25; 99.4 2.5E-13 8.4E-18 134.3 7.5 86 15-102 38-125 (128)
290 1ses_A Seryl-tRNA synthetase; 99.4 5.9E-13 2E-17 156.8 11.0 142 741-887 155-319 (421)
291 2dq0_A Seryl-tRNA synthetase; 99.4 5.8E-13 2E-17 158.0 11.0 144 740-888 181-344 (455)
292 1ukx_A GCN2, GCN2 EIF2alpha ki 99.4 4.9E-13 1.7E-17 133.8 7.9 89 15-105 43-132 (137)
293 3dsq_A Pyrrolysyl-tRNA synthet 99.3 1.6E-12 5.5E-17 145.8 9.9 130 755-885 73-210 (288)
294 2ebk_A RWD domain-containing p 99.3 9.5E-13 3.2E-17 130.1 5.8 86 16-105 39-124 (128)
295 2cja_A Seryl-tRNA synthetase; 99.3 2E-12 6.8E-17 154.8 7.2 147 731-879 211-407 (522)
296 3vbb_A Seryl-tRNA synthetase, 99.1 1.3E-10 4.5E-15 138.1 12.8 144 741-886 190-363 (522)
297 3qtc_A Pyrrolysyl-tRNA synthet 99.1 3.4E-10 1.2E-14 127.5 14.0 123 755-885 79-213 (290)
298 1v95_A Nuclear receptor coacti 99.1 4.1E-10 1.4E-14 109.5 10.7 102 1087-1189 5-109 (130)
299 1wle_A Seryl-tRNA synthetase; 99.0 4.7E-10 1.6E-14 134.0 11.7 142 741-884 208-371 (501)
300 2dax_A Protein C21ORF6; RWD do 99.0 2.4E-10 8.1E-15 116.3 7.2 87 18-108 58-145 (152)
301 3lss_A Seryl-tRNA synthetase; 99.0 7.3E-10 2.5E-14 131.0 11.8 143 741-886 197-361 (484)
302 3tm0_A Aminoglycoside 3'-phosp 99.0 1.4E-09 4.8E-14 120.0 11.4 141 378-567 11-212 (263)
303 3qne_A Seryl-tRNA synthetase, 98.9 1.8E-09 6.1E-14 127.6 11.6 143 741-886 174-338 (485)
304 3err_A Fusion protein of micro 98.9 5.2E-09 1.8E-13 126.2 12.5 141 741-886 264-426 (536)
305 2daw_A RWD domain containing p 98.9 1.2E-09 4.2E-14 111.1 5.8 84 18-108 63-147 (154)
306 1nd4_A Aminoglycoside 3'-phosp 98.8 8.1E-09 2.8E-13 113.0 10.9 135 379-567 18-213 (264)
307 1x54_A Asparaginyl-tRNA synthe 98.7 3.5E-08 1.2E-12 116.6 11.8 114 750-876 133-250 (434)
308 3dxp_A Putative acyl-COA dehyd 98.7 2.8E-08 9.7E-13 115.0 10.5 142 385-568 42-248 (359)
309 1wyd_A Hypothetical aspartyl-t 98.7 6.5E-08 2.2E-12 114.1 11.7 114 750-876 132-249 (429)
310 1n9w_A Aspartyl-tRNA synthetas 98.6 3.4E-08 1.2E-12 116.2 7.1 115 750-876 123-241 (422)
311 3mf2_A BLL0957 protein; aminoa 98.5 2.7E-07 9.4E-12 103.8 10.1 145 740-887 52-233 (346)
312 1eov_A ASPRS, aspartyl-tRNA sy 98.4 7.2E-07 2.5E-11 106.9 12.3 115 750-876 176-295 (487)
313 3sg8_A APH(2'')-ID; antibiotic 98.2 6.9E-07 2.4E-11 100.8 5.9 134 387-568 26-223 (304)
314 3r70_A Aminoglycoside phosphot 98.2 7.2E-06 2.5E-10 93.3 13.0 130 384-568 40-237 (320)
315 3a74_A Lysyl-tRNA synthetase; 98.2 8.1E-06 2.8E-10 97.8 13.5 115 751-876 173-291 (493)
316 1e1o_A Lysyl-tRNA synthetase, 97.9 5.2E-05 1.8E-09 90.9 13.1 115 751-876 182-300 (504)
317 3tdw_A Gentamicin resistance p 97.9 0.00011 3.6E-09 83.1 14.9 133 386-568 24-224 (306)
318 1b7y_A Phers, protein (phenyla 97.9 0.00011 3.7E-09 84.2 14.7 121 755-878 103-247 (350)
319 4gkh_A Aminoglycoside 3'-phosp 97.8 8.4E-05 2.9E-09 81.8 13.0 131 388-567 31-222 (272)
320 3l4g_A Phenylalanyl-tRNA synth 97.8 9.2E-05 3.1E-09 88.0 12.9 129 754-885 226-406 (508)
321 2olc_A MTR kinase, methylthior 97.8 6.9E-05 2.4E-09 87.7 10.9 53 386-438 35-92 (397)
322 3a5y_A GENX, putative lysyl-tR 97.7 0.00017 5.9E-09 82.5 13.1 120 749-876 33-158 (345)
323 3d1u_A Putative fructosamine-3 97.6 0.00022 7.4E-09 80.0 12.1 61 384-447 18-81 (288)
324 2du3_A O-phosphoseryl-tRNA syn 97.6 7.3E-05 2.5E-09 89.3 8.1 76 802-879 180-260 (534)
325 3ovc_A Hygromycin-B 4-O-kinase 97.6 0.00022 7.6E-09 82.6 11.8 55 384-447 44-100 (362)
326 3nem_A Aspartyl-tRNA synthetas 97.5 0.00039 1.3E-08 82.0 12.0 116 751-875 136-253 (438)
327 2xgt_A Asparaginyl-tRNA synthe 97.5 0.00051 1.7E-08 81.2 12.4 112 750-875 130-246 (435)
328 2du7_A O-phosphoseryl-tRNA syn 97.3 0.0006 2.1E-08 81.4 10.0 76 801-878 191-271 (549)
329 2yle_A Protein spire homolog 1 97.3 0.0024 8.3E-08 67.7 13.5 133 505-685 34-194 (229)
330 2q83_A YTAA protein; 2635576, 97.2 0.0023 7.8E-08 72.4 14.0 30 538-567 222-251 (346)
331 3ats_A Putative uncharacterize 97.2 0.00089 3E-08 76.8 10.0 66 384-449 23-99 (357)
332 1c0a_A Aspartyl tRNA synthetas 97.0 0.0034 1.2E-07 76.8 13.6 99 751-857 137-240 (585)
333 1l0w_A Aspartyl-tRNA synthetas 97.0 0.0037 1.3E-07 76.3 13.6 99 751-857 143-246 (580)
334 4ex5_A Lysine--tRNA ligase; st 96.9 0.0064 2.2E-07 73.0 14.2 102 751-857 203-306 (529)
335 3bju_A Lysyl-tRNA synthetase; 96.9 0.0068 2.3E-07 73.1 14.3 100 751-857 175-278 (521)
336 3pco_A Phenylalanyl-tRNA synth 96.9 0.0017 5.7E-08 73.5 8.4 96 755-855 109-215 (327)
337 2rhq_A Phenylalanyl-tRNA synth 96.9 0.0048 1.6E-07 69.2 12.0 118 755-878 55-186 (294)
338 2pyw_A Uncharacterized protein 96.9 0.0031 1.1E-07 74.2 11.1 32 536-568 230-261 (420)
339 3m4p_A Ehasnrs, asparaginyl-tR 96.9 0.003 1E-07 74.9 10.7 113 751-875 155-270 (456)
340 3ig2_A Phenylalanyl-tRNA synth 96.7 0.0089 3E-07 63.8 12.0 125 755-879 6-154 (213)
341 2odr_B Phosphoseryl-tRNA synth 96.6 0.01 3.5E-07 71.5 12.8 76 802-879 199-279 (648)
342 2odr_A Phosphoseryl-tRNA synth 96.6 0.01 3.6E-07 71.4 12.8 76 802-879 199-279 (665)
343 2odr_D Phosphoseryl-tRNA synth 96.6 0.011 3.6E-07 71.5 12.8 76 802-879 199-279 (685)
344 2odr_C Phosphoseryl-tRNA synth 96.6 0.011 3.9E-07 71.4 13.1 76 802-879 199-279 (701)
345 4ah6_A Aspartate--tRNA ligase, 96.6 0.016 5.5E-07 70.7 14.2 114 751-876 147-265 (617)
346 3ica_A Phenylalanyl-tRNA synth 96.5 0.011 3.9E-07 62.9 11.5 125 755-879 6-154 (213)
347 3i7f_A Aspartyl-tRNA synthetas 96.4 0.0097 3.3E-07 71.6 10.8 97 751-855 243-344 (548)
348 3dxq_A Choline/ethanolamine ki 96.2 0.026 9E-07 63.0 12.7 29 539-568 174-202 (301)
349 3jr1_A Putative fructosamine-3 96.0 0.034 1.2E-06 62.8 12.5 57 385-448 40-99 (312)
350 3l4g_B Phenylalanyl-tRNA synth 95.9 0.03 1E-06 68.8 11.8 121 756-879 394-525 (589)
351 3csv_A Aminoglycoside phosphot 95.7 0.022 7.6E-07 64.5 9.0 31 538-568 183-217 (333)
352 3f7w_A Putative fructosamine-3 95.5 0.13 4.3E-06 57.0 14.2 54 382-438 16-69 (288)
353 1nw1_A Choline kinase (49.2 KD 95.4 0.047 1.6E-06 64.5 10.9 61 385-449 77-145 (429)
354 1zyl_A Hypothetical protein YI 95.3 0.087 3E-06 59.2 12.3 47 387-438 32-78 (328)
355 2ppq_A HSK, HK, homoserine kin 95.2 0.048 1.6E-06 61.2 9.7 41 528-568 170-217 (322)
356 3feg_A Choline/ethanolamine ki 95.0 0.057 2E-06 62.6 9.7 60 387-449 56-123 (379)
357 2rhq_B Phenylalanyl-tRNA synth 94.7 0.13 4.3E-06 65.3 12.5 103 755-857 495-604 (795)
358 3c5i_A Choline kinase; choline 94.6 0.06 2.1E-06 61.9 8.4 28 539-567 213-240 (369)
359 2qg7_A Ethanolamine kinase PV0 94.2 0.26 8.8E-06 58.6 13.0 62 385-449 112-174 (458)
360 3i1a_A Spectinomycin phosphotr 94.1 0.25 8.5E-06 56.2 12.1 31 538-568 206-236 (339)
361 1b7y_B Phers, protein (phenyla 93.9 0.18 6.2E-06 63.6 11.2 116 755-878 491-622 (785)
362 3f2s_A CK, chetk-alpha, cholin 91.2 0.97 3.3E-05 52.6 11.8 29 539-567 245-279 (401)
363 3cmq_A Phenylalanyl-tRNA synth 89.4 1.3 4.4E-05 51.8 10.8 92 756-854 51-164 (415)
364 3mes_A Choline kinase; malaria 88.4 0.52 1.8E-05 55.3 6.6 29 539-568 263-291 (424)
365 3g15_A CK, chetk-alpha, cholin 85.9 2.2 7.5E-05 49.5 10.0 29 540-568 246-280 (401)
366 3pco_B Phenylalanyl-tRNA synth 82.4 2.3 7.8E-05 53.8 8.5 119 758-878 494-630 (795)
367 3cxl_A N-chimerin; SH2, RHO-GA 73.3 0.24 8.2E-06 59.0 -4.0 75 387-464 148-232 (463)
368 1x54_A Asparaginyl-tRNA synthe 59.5 3.8 0.00013 48.1 2.5 18 1062-1079 397-414 (434)
369 1wyd_A Hypothetical aspartyl-t 57.9 4.4 0.00015 47.5 2.7 18 1062-1079 392-409 (429)
370 3m4p_A Ehasnrs, asparaginyl-tR 46.6 8.6 0.00029 45.3 2.7 56 1014-1079 369-436 (456)
371 3kpa_A Probable ubiquitin fold 44.7 14 0.00048 36.4 3.3 28 34-61 85-112 (168)
372 2a7l_A Hypothetical ubiquitin- 44.1 22 0.00076 34.5 4.8 26 33-58 70-95 (136)
373 2z6o_A UFM1-conjugating enzyme 40.8 17 0.00057 36.6 3.3 25 34-58 83-107 (172)
374 4ano_A ESSB; membrane protein, 38.7 19 0.00065 38.0 3.6 68 493-566 61-131 (219)
375 1z2u_A Ubiquitin-conjugating e 33.4 39 0.0013 33.3 4.7 26 33-58 50-75 (150)
376 2ayv_A Ubiquitin-conjugating e 33.1 39 0.0013 34.0 4.7 26 33-58 67-92 (166)
377 1zuo_A Hypothetical protein LO 33.0 22 0.00075 36.6 2.9 24 35-58 90-113 (186)
378 1fxt_A Ubiquitin-conjugating e 32.7 42 0.0014 33.0 4.8 26 33-58 48-73 (149)
379 1zdn_A Ubiquitin-conjugating e 32.3 42 0.0014 33.4 4.8 26 33-58 59-84 (158)
380 2fo3_A Ubiquitin-conjugating e 32.3 44 0.0015 31.8 4.7 26 33-58 52-77 (125)
381 3m20_A 4-oxalocrotonate tautom 32.2 48 0.0017 27.1 4.4 33 51-86 1-33 (62)
382 2bep_A Ubiquitin-conjugating e 32.1 42 0.0014 33.4 4.7 26 33-58 57-82 (159)
383 2c4o_A Ubiquitin-conjugating e 32.0 42 0.0014 33.7 4.7 26 33-58 65-90 (165)
384 2r0j_A Ubiquitin carrier prote 31.9 43 0.0015 32.9 4.8 26 33-58 47-72 (149)
385 2h2y_A Ubiquitin-conjugating e 31.5 45 0.0015 32.3 4.7 26 33-58 66-91 (136)
386 2q0v_A Ubiquitin-conjugating e 31.3 45 0.0015 33.2 4.7 26 33-58 71-96 (156)
387 1jat_B Ubiquitin-conjugating e 31.3 46 0.0016 32.3 4.8 26 33-58 56-81 (138)
388 2aak_A UBC1, ubiquitin conjuga 31.2 45 0.0015 32.9 4.8 26 33-58 50-75 (152)
389 2c2v_B Ubiquitin-conjugating e 30.9 45 0.0015 33.0 4.7 26 33-58 51-76 (154)
390 2e2c_A Ubiquitin conjugating e 30.9 45 0.0015 33.1 4.7 26 33-58 55-80 (156)
391 1jat_A Ubiquitin-conjugating e 30.8 45 0.0015 33.0 4.7 26 33-58 51-76 (155)
392 3h8k_A Ubiquitin-conjugating e 30.4 46 0.0016 33.2 4.7 26 33-58 50-75 (164)
393 2awf_A Ubiquitin-conjugating e 30.4 46 0.0016 33.6 4.7 26 33-58 64-89 (172)
394 2onu_A Ubiquitin-conjugating e 29.9 49 0.0017 32.7 4.8 25 33-57 45-69 (152)
395 4gpr_A Ubiquitin-conjugating e 29.6 50 0.0017 32.5 4.8 26 33-58 50-75 (151)
396 1otf_A 4-oxalocrotonate tautom 29.1 47 0.0016 26.7 3.8 34 51-86 1-34 (62)
397 4ann_A ESSB; membrane protein, 29.0 26 0.00089 36.8 2.7 51 514-566 76-126 (215)
398 2a4d_A Ubiquitin-conjugating e 28.8 52 0.0018 32.9 4.7 26 33-58 75-100 (160)
399 2opa_A Probable tautomerase YW 28.3 50 0.0017 26.5 3.8 34 51-86 1-34 (61)
400 2grr_A Ubiquitin-conjugating e 28.1 54 0.0018 32.7 4.7 26 33-58 58-83 (161)
401 2gjd_A Ubiquitin-conjugating e 27.8 52 0.0018 32.7 4.5 25 33-57 55-79 (157)
402 3rcz_B SUMO-conjugating enzyme 27.7 56 0.0019 32.7 4.8 26 33-58 61-86 (163)
403 2ucz_A UBC7, ubiquitin conjuga 27.6 55 0.0019 32.7 4.8 26 33-58 51-76 (165)
404 2z5d_A Ubiquitin-conjugating e 27.2 57 0.0019 33.3 4.8 25 34-58 68-92 (179)
405 3ry0_A Putative tautomerase; o 27.0 54 0.0018 27.0 3.8 34 51-86 1-34 (65)
406 1wzv_A Ubiquitin-conjugating e 27.0 36 0.0012 33.7 3.2 26 33-58 50-75 (155)
407 1c4z_D UBCH7, ubiquitin conjug 26.9 37 0.0013 33.6 3.2 25 34-58 49-73 (154)
408 1yrv_A Ubiquitin-conjugating l 26.7 51 0.0018 33.2 4.3 26 33-58 69-94 (169)
409 1i7k_A Ubiquitin-conjugating e 26.5 55 0.0019 33.3 4.5 26 33-58 76-101 (179)
410 3bzh_A Ubiquitin-conjugating e 26.3 59 0.002 33.6 4.8 26 33-58 94-119 (194)
411 2y9m_A Ubiquitin-conjugating e 26.1 58 0.002 32.9 4.6 25 33-57 64-88 (172)
412 2f4z_A Tgtwinscan_2721 - E2 do 26.0 60 0.0021 33.5 4.8 26 33-58 91-116 (193)
413 2pwq_A Ubiquitin conjugating e 26.0 58 0.002 34.2 4.7 26 33-58 69-94 (216)
414 3qc5_X Platelet binding protei 25.9 90 0.0031 34.7 6.2 44 35-81 271-314 (360)
415 3m21_A Probable tautomerase HP 25.4 65 0.0022 26.7 4.1 34 51-86 1-37 (67)
416 1yh2_A HSPC150 protein similar 25.4 64 0.0022 32.4 4.7 26 33-58 50-75 (169)
417 1ayz_A UBC2, ubiquitin-conjuga 24.7 68 0.0023 32.3 4.8 26 33-58 50-75 (169)
418 1y8x_A Ubiquitin-conjugating e 24.5 43 0.0015 33.4 3.2 26 33-58 50-75 (160)
419 3rz3_A Ubiquitin-conjugating e 24.5 67 0.0023 32.8 4.7 26 33-58 54-79 (183)
420 3ubt_Y Modification methylase 24.3 22 0.00074 39.6 1.1 15 145-160 3-17 (331)
421 2f4w_A Ubiquitin-conjugating e 24.1 68 0.0023 32.8 4.7 26 33-58 60-85 (187)
422 2nvu_C NEDD8-conjugating enzym 24.0 44 0.0015 34.1 3.2 25 34-58 71-95 (180)
423 12as_A Asparagine synthetase; 23.7 2.5E+02 0.0087 31.1 9.3 102 754-859 7-127 (330)
424 3mb2_A 4-oxalocrotonate tautom 23.7 54 0.0019 27.7 3.3 34 51-86 2-35 (72)
425 3abf_A 4-oxalocrotonate tautom 23.3 55 0.0019 26.6 3.2 33 51-85 2-34 (64)
426 3k9o_A Ubiquitin-conjugating e 23.2 72 0.0025 33.0 4.8 25 33-57 54-78 (201)
427 1yf9_A Ubiquitin carrier prote 23.1 75 0.0026 32.0 4.8 26 33-58 54-79 (171)
428 2x4k_A 4-oxalocrotonate tautom 22.8 72 0.0025 25.5 3.8 35 50-86 3-37 (63)
429 3fn1_B NEDD8-conjugating enzym 22.1 44 0.0015 33.5 2.8 26 33-58 60-85 (167)
430 3o2u_A NEDD8-conjugating enzym 22.0 50 0.0017 33.9 3.2 26 33-58 79-104 (190)
431 2hlw_A Ubiquitin-conjugating e 21.8 76 0.0026 32.0 4.5 25 34-58 86-110 (170)
432 4ds2_A Ubiquitin-conjugating e 21.5 76 0.0026 31.8 4.4 26 33-58 68-93 (167)
433 3a5y_A GENX, putative lysyl-tR 21.3 28 0.00095 39.4 1.2 18 1062-1079 312-329 (345)
434 3e46_A Ubiquitin-conjugating e 21.2 80 0.0027 34.0 4.7 26 33-58 106-131 (253)
435 3ej9_A Alpha-subunit of trans- 20.8 81 0.0028 27.0 3.8 34 51-86 2-35 (76)
436 1tte_A Ubiquitin-conjugating e 20.3 51 0.0018 34.6 2.9 25 34-58 50-74 (215)
No 1
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=100.00 E-value=1.6e-69 Score=651.00 Aligned_cols=413 Identities=15% Similarity=0.203 Sum_probs=354.9
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccc-eEEEeec---C----------
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRN-TVKLLTH---G---------- 799 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~-my~f~D~---~---------- 799 (1196)
.+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++..+| +..++ ||+|.|+ +
T Consensus 12 ~~~p~G~~D~lP~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G-~~~ke~m~~~~d~~~~g~~~~~~~~~~ 90 (465)
T 3net_A 12 FSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG-NQGDNIIYGLEPILPPNRQAEKDKSGD 90 (465)
T ss_dssp CSCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGG-CC--CBEEEEEEEC-------------
T ss_pred ccCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccC-CCCccceEEEecccccccccccccccC
Confidence 367899999999999999999999999999999999999999 333345 55677 9999999 3
Q ss_pred --CceEeecCCCcHHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccc--hHHHHHHHHH
Q 000993 800 --GDLLELSHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALT--EAEVLKVTMD 871 (1196)
Q Consensus 800 --G~~laLRPD~T~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~a--DaEvI~la~~ 871 (1196)
|+.++||||+|+|+||+++++. ..|+|+||+|+|||+++||.+|. ||+|+|+|+||.+++.+ |+|||.++.+
T Consensus 91 ~~g~~l~LRpd~T~~~aR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~Ref~Q~g~ei~G~~~~~a~~DaEvi~l~~~ 170 (465)
T 3net_A 91 TGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITE 170 (465)
T ss_dssp ---CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCChHHHHHHHHhcccccCCCeEEEEeccEEecCCCCCCCcceeEEeeEEEECCCCccchhhHHHHHHHHH
Confidence 8999999999999999999864 46999999999999999987665 59999999999999999 9999999999
Q ss_pred HHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHH
Q 000993 872 IVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 951 (1196)
Q Consensus 872 ~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l 951 (1196)
+|+.||+.+ ++|+|||+++++++++.+|++++++..++++|+++| +.++++++.++. +.+++++.++.+
T Consensus 171 ~l~~lgl~~-~~i~in~~~~l~~~l~~~g~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l~-~~~l~~~~~~~l 239 (465)
T 3net_A 171 IFEAVNIGD-FVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLE---------KIGEAKVKLELE-KEGINPEQTQKI 239 (465)
T ss_dssp HHHHHTCSC-EEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHTTHH---------HHHHHHHHHHHH-HTTCCHHHHHHH
T ss_pred HHHHcCCCc-eEEEECCHHHHHHHHHHcCCCHHHHHHHHHHHHhcc---------ccCHHHHHHHHH-hcCCCHHHHHHH
Confidence 999999985 999999999999999999999998888888888877 667777866665 489999999999
Q ss_pred HHHHHHhcCChhhHHHHHhccC---CCChHHHHHHHHH--H-HHHcCCCce----EEEcCCCCCCCCCccceEEEEEecC
Q 000993 952 QTVGLRFCGAADQALPRLRGAL---PADKPTRKALDEL--Y-LRIWRIEKN----IYIDALMPPIESYHRNLFFQVFSVK 1021 (1196)
Q Consensus 952 ~~l~~~~~g~~~~~l~~l~~~~---~~~~~~~~~l~~L--~-l~~~g~~~~----i~~Dl~lvrgl~YYTG~vFe~~~~~ 1021 (1196)
..++ .+.|+..++++++++++ ..++.+.+++++| . ++.+ +..+ +.||++++||++||||+|||+|..+
T Consensus 240 ~~l~-~~~g~~~~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~l~~~-~~~~~~~~~~~D~~lvrgldYYtG~vFe~~~~~ 317 (465)
T 3net_A 240 IDFV-KIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR-NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIG 317 (465)
T ss_dssp HHHH-TCCSCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-HTTCCGGGEEECTTCCCCSSSEEEEEEEEEETT
T ss_pred HHHH-HhcCChHHHHHHHHHhhhccccChHHHHHHHHHHHHHHHHh-cccccCceEEEccCccCCCcccCceEEEEEECC
Confidence 9998 68898888999999875 7788888999888 3 4555 4446 9999999999999999999999976
Q ss_pred CCCccccccccccccccccchhhhhc-cccccccccCCCCCCCcceecccHHHHHhhccCCCCCCC-CCCCceEEEEEcC
Q 000993 1022 EKYPATLVEGTLLAVGGRYDYLLHRM-WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVR-NEAGTSVLVCSRG 1099 (1196)
Q Consensus 1022 ~~~~~~~~~~~~I~~GGRYD~L~~~f-g~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~-~~~~~~vlv~~~~ 1099 (1196)
.+ .+++||+|||||+|+++| |+ ++||||||+|+|||+.+|.+....+. ...+.+|+|++.+
T Consensus 318 ~~------~~~~i~~GGRYD~L~~~f~g~-----------~~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~ 380 (465)
T 3net_A 318 HE------ALGSICSGGRYEELVGTFIGE-----------KMPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQ 380 (465)
T ss_dssp CG------GGCCSSEEEEESSSSGGGTCS-----------CCCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSC
T ss_pred CC------ccceecccccHHHHhhhhcCC-----------CCceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcC
Confidence 42 235899999999998877 43 27999999999999998874332221 3467899999885
Q ss_pred CCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCC-eEEEEEcCCCcccccchHHHH
Q 000993 1100 GGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG-LVKVRHLDVKKEKEVQRESLV 1178 (1196)
Q Consensus 1100 ~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g-~v~vk~l~~g~q~~v~~~el~ 1178 (1196)
++...+|++++++||++|++|++++. ++++++++++|++.|+|++|++|++ +++| +|+||||.+|+|..+++++++
T Consensus 381 -~~~~~~A~~la~~LR~~Gi~ve~d~~-~~sl~~q~k~A~~~g~p~~iiiG~~-~~~g~~V~vk~~~t~eq~~v~~~el~ 457 (465)
T 3net_A 381 -DELMPTYLKVSQQLRQAGLNVITNFE-KRQLGKQFQAADKQGIRFCVIIGAD-EAAAQKSSLKDLQSGEQVEVALADLA 457 (465)
T ss_dssp -GGGHHHHHHHHHHHHHTTCCEEECCS-CCCHHHHHHHHHHHTCCEEEECCHH-HHHTTCCEEEETTTTEEEECC-CCHH
T ss_pred -HHHHHHHHHHHHHHHHCCCEEEEEeC-CCCHHHHHHHHHHcCCCEEEEECch-hhcCCEEEEEECCCCceEEeeHHHHH
Confidence 67889999999999999999998877 5799999999999999999999999 9999 999999999999999999999
Q ss_pred HHHHHH
Q 000993 1179 RFLLDA 1184 (1196)
Q Consensus 1179 ~~l~~~ 1184 (1196)
+.|+++
T Consensus 458 ~~l~~~ 463 (465)
T 3net_A 458 EEIKRR 463 (465)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998765
No 2
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.9e-69 Score=654.82 Aligned_cols=430 Identities=25% Similarity=0.421 Sum_probs=360.0
Q ss_pred cccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 736 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 736 ~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..+.||+|.|++|+.++||||+|+
T Consensus 65 ~~l~~P~G~~D~lP~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~ge~~~~my~f~D~~g~~l~LRPd~T~ 144 (517)
T 4g85_A 65 FVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTV 144 (517)
T ss_dssp CCCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC------CSCBBCCTTSCCEEECSCSHH
T ss_pred eeeeCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccCcCcceeEEEECCCCCEEEeCCcCcH
Confidence 34588999999999999999999999999999999999999999 45556444567899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeeecCCC--CC-CCcceeEeEEEEeCCCCc-cchHHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 812 PFIRWAISNQKSSFKRYEISSVYRRAIG--HS-PPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 812 ~iaR~~a~~~~~P~r~~Y~G~VfR~e~~--~~-~~~ef~Q~GvEiiG~~~~-~aDaEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
|+||++++|+..|+|+||+|+|||+|+| ++ +.|||+|+|+|+||..++ .+|+|+|.++.++|+.||+.+ +.|+||
T Consensus 145 ~~aR~~~~~~~~p~k~yyig~vfR~Erp~~~~GR~ReF~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~in 223 (517)
T 4g85_A 145 PFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVN 223 (517)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEEECCCC-------CCEEEEEEEEEESCCCTTHHHHHHHHHHHHHHHHHCCCC-EEEEEE
T ss_pred HHHHHHHhCCCCCceeEEEeceEeccCcccccCccceeeeeceeccCCccchHHHHHHHHHHHHHHHhhcCCc-cccccc
Confidence 9999999998889999999999999998 33 445699999999998765 689999999999999999986 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 967 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 967 (1196)
|+++++++++.+|++++..+.+..+++++| +.++++++++++...+++++.++.+..++ ...|..+ .++
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~ld~ld---------k~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~~-~~~ 292 (517)
T 4g85_A 224 DRRILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGVS-LVE 292 (517)
T ss_dssp EHHHHHHHHHHHTCCHHHHHHHHHHHHTTT---------TSCHHHHHHHHHHHTCCCHHHHHHHHHHH-HCCBSHH-HHH
T ss_pred chhhHHHHHHhhcchHHHHHHHHHHHhhhc---------chhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCch-HHH
Confidence 999999999999999999999999998887 56678888999988999999999999988 4666643 333
Q ss_pred HHhc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcc--cccccccccccc
Q 000993 968 RLRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGG 1038 (1196)
Q Consensus 968 ~l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~--~~~~~~~I~~GG 1038 (1196)
.+.. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+.+. .....++||+||
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFE~~~~~~~~~~~~~~~~~~~i~~GG 372 (517)
T 4g85_A 293 QLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGG 372 (517)
T ss_dssp HHHHCHHHHTCHHHHHHHHHHHHHHHHHHHHTCGGGEEECTTCCCCTTTCSSEEEEEEEC-------------CCSEEEE
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHHHHhhCCCcceeeccccccCCcccCCeEEEEEECCcccccccCCcccceecCCC
Confidence 3332 123455566666666 7888999999999999999999999999999987654311 112235899999
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
|||+|++.|+. ++.++||||||+|+|||+.+|++. ........+++|+|++.+ +....+|++++++||
T Consensus 373 RYD~Lv~~f~~--------~G~~~pavGfa~gierl~~~le~~~~~~~~~~~~~~~~V~v~~~~-~~~~~~a~~l~~~Lr 443 (517)
T 4g85_A 373 RYDGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELW 443 (517)
T ss_dssp ECHHHHHTTSS--------SCCCCCEEEEEECHHHHHHHHHHHHHHTTCCCCSCCCCEEEEESS-SSCHHHHHHHHHHHH
T ss_pred chhHHHHHhcc--------CCCCCCcccccchHHHHHHHHHHhccccCccccCCCCEEEEEeCC-HHHHHHHHHHHHHHH
Confidence 99999998842 134679999999999999988632 122334567899999986 778899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
++|++|++++..++++++++++|++.|++|+||+|++|+++|+|+||||.+|+|..+++++|+++|+++++
T Consensus 444 ~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 514 (517)
T 4g85_A 444 DAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 514 (517)
T ss_dssp HTTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHHHHHTTEEEEEETTTCCEEEEEHHHHHHHHHHHCC
T ss_pred HCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECChhHhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 99999998876567899999999999999999999999999999999999999999999999999998754
No 3
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=100.00 E-value=4.1e-69 Score=642.98 Aligned_cols=404 Identities=16% Similarity=0.186 Sum_probs=332.5
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 30 ~~p~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~~~~~my~f~D~~g~~l~LRpd~T~~~ 109 (456)
T 3lc0_A 30 EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSL 109 (456)
T ss_dssp SCSTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred cCCCCCcccCHhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccchhhceEEEEcCCCCEEecCCcCHHHH
Confidence 67899999999999999999999999999999999999999 44334 66678999999999999999999999999
Q ss_pred HHHHHhCCC---CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCC--CCceEEEeC
Q 000993 814 IRWAISNQK---SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH--AESCDIHLN 887 (1196)
Q Consensus 814 aR~~a~~~~---~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi--~~~~~i~Lg 887 (1196)
||+++++.. .|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+ .+ ++|+||
T Consensus 110 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~ReF~Q~g~ei~G~~~~~~DaEvi~l~~~~l~~lgl~~~~-~~i~in 188 (456)
T 3lc0_A 110 ARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKD-VGIKVN 188 (456)
T ss_dssp HHHHHHSCTTCCSSEEEEECCEEECCCC-----CCEEEEEEEEEESCCSTHHHHHHHHHHHHHHHHTTCCTTT-EEEEEE
T ss_pred HHHHHhcCcccCCCEEEEEeccEEecCCCCCCCccceEEEEEEEEcCCChHhhHHHHHHHHHHHHHcCCCCCc-eEEEEc
Confidence 999998753 4999999999999999986655 6999999999999999999999999999999999 54 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 967 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 967 (1196)
|+++++++++.+|++++.+..++.++++++ +.+++++++.+. +.+++++.++.+..++. + + .++
T Consensus 189 ~~~il~~~l~~~g~~~~~~~~v~~~idkl~---------~~~~~~~~~~L~-~~~l~~~~~~~l~~~~~-~-~----~~~ 252 (456)
T 3lc0_A 189 SRKVLQTVVEQAGVTSDKFAPVCVIVDKME---------KIPREEVEAQLA-VLGLEPTVVDAITTTLS-L-K----SID 252 (456)
T ss_dssp EHHHHHHHHHHTTCCGGGHHHHHHHHTTTT---------TSCHHHHHHHHH-HTTCCHHHHHHHHHHHT-C-C----SHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhc---------ccCHHHHHHHHH-HcCCCHHHHHHHHHHhc-c-C----CHH
Confidence 999999999999999888888888888776 456777766554 47999999999988873 2 2 244
Q ss_pred HHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhh
Q 000993 968 RLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLH 1045 (1196)
Q Consensus 968 ~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~ 1045 (1196)
++.+.+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++
T Consensus 253 ~l~~~l~~~~~~~~~L~~l~~~l~~~gi~~~~~~D~~lvRgldYYTG~vFE~~~~~-------g~~~~I~~GGRYD~Lv~ 325 (456)
T 3lc0_A 253 EIAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDRE-------GKFRALCGGGRYDNLLT 325 (456)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHTCGGGEEECTTCCCSCTTCCSEEEEEEETT-------SCSSCSEEEEECSSHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHcCCCceEEEecCccCCccccCCeEEEEEECC-------CCcceEeecccHHHHHH
Confidence 4555444333445555555 77889998889999999999999999999999753 12358999999999999
Q ss_pred hccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEee
Q 000993 1046 RMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVP 1125 (1196)
Q Consensus 1046 ~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~ 1125 (1196)
.||++ .++||||||+|+|||+.+|.+..........++++|++.+ ++...+|+++|++||++|++|++++
T Consensus 326 ~fg~~---------~~~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~Gi~ve~~~ 395 (456)
T 3lc0_A 326 TYGSP---------TPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFD-ESMRPHALAVLRRLRDAGRSADIIL 395 (456)
T ss_dssp HTTCS---------SCCCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESS-GGGHHHHHHHHHHHHHTTCCEEECC
T ss_pred HhCCC---------CCCCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcC-HHHHHHHHHHHHHHHHCCCeEEEec
Confidence 99764 1369999999999999988743222223345789999986 6678899999999999999999888
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1126 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1126 ~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
. .++++++++||++.|++|+||+|++|+++|+|+||||.+|+|..+++++.
T Consensus 396 ~-~~slkkq~k~A~k~ga~~vviiGe~E~~~g~v~vK~l~tgeQ~~~~~~~~ 446 (456)
T 3lc0_A 396 D-KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAER 446 (456)
T ss_dssp S-CCCHHHHHHHHHHTTEEEEEEECHHHHHTTEEEEEECC------------
T ss_pred C-CCCHHHHHHHHHHcCCCEEEEECCchhcCCeEEEEECCCCCeEEeccccc
Confidence 7 57899999999999999999999999999999999999999999988764
No 4
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-68 Score=641.24 Aligned_cols=428 Identities=25% Similarity=0.423 Sum_probs=361.1
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..++||+|.|++|+.++||||+|+|+
T Consensus 14 ~~~p~G~~D~lP~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g~~~~~~y~f~D~~g~~l~LRPd~T~~~ 93 (464)
T 4g84_A 14 LKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPF 93 (464)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC----CCCBBCCCSSCCEEECSCSHHHH
T ss_pred eeCCCCcCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccCcCcceeEEEECCCCCEEEeCCcCcHHH
Confidence 367999999999999999999999999999999999999999 4555544456889999999999999999999999
Q ss_pred HHHHHhCCCCceeEEEecCeeecCCCC--C-CCcceeEeEEEEeCCCCc-cchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 814 IRWAISNQKSSFKRYEISSVYRRAIGH--S-PPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 814 aR~~a~~~~~P~r~~Y~G~VfR~e~~~--~-~~~ef~Q~GvEiiG~~~~-~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
||++++|+..|+|+||+|+|||+|+|+ . +.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||+
T Consensus 94 aR~~~~~~~~p~k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~~ 172 (464)
T 4g84_A 94 ARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVNDR 172 (464)
T ss_dssp HHHHHHTTCSCEEEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHHHHHHHHHHHHHHHHTCCC-EEEEEEEH
T ss_pred HHHHHhcCCCCceeEEEecceeccCCccccCccceeeecceeccCCccchhhHHHHHHHHHHHHHHhCCCC-cceeecch
Confidence 999999988899999999999999884 3 445799999999998665 689999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.++++++..+.+..++++++ +.++++++++++...+++++.++.+..++ ...|.. +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~---------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~~ 241 (464)
T 4g84_A 173 RILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQL 241 (464)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHGGGG---------TSCHHHHHHHHHHTTCCCHHHHHHHHHHH-TCEESH-HHHHHH
T ss_pred hhHHHHHHhhcCcHHHHHHHHHHHHHhc---------hhhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHHH
Confidence 9999999999999999999999998887 45678888889888999999999999888 455653 334433
Q ss_pred hc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcc--cccccccccccccc
Q 000993 970 RG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGRY 1040 (1196)
Q Consensus 970 ~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~--~~~~~~~I~~GGRY 1040 (1196)
.. .+..+....+++++| +++.+|+..+|.||++++||++||||+|||++..+.+.+. .....++||+||||
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFe~~~~~~~~~~~~~~~~~~~i~~GGRY 321 (464)
T 4g84_A 242 LQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRY 321 (464)
T ss_dssp TTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCCCTTTCSSEEEEEEEEECC-------EEEEEEEEEEEC
T ss_pred HhcccccccHHHHHHHHHHHHHHhHHHhhCCCcceeecccccCCCcCcCCeEEEEEECCcccccccCCcccceeccCCch
Confidence 32 122345555666665 7888999889999999999999999999999987654311 11123579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
|+|++.||. ++.++||||||+|+|||+.+|.+. ..+.....+++|+|++.+ +....+|++++++||++
T Consensus 322 D~L~~~~~~--------~g~~~pavGfaigieRl~~~l~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~l~~~Lr~~ 392 (464)
T 4g84_A 322 DGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWDA 392 (464)
T ss_dssp CSTGGGTST--------TCCCCCEEEEEECHHHHHHHHHHHHHTTTCCCCSCCCCEEEECSS-SSCHHHHHHHHHHHHHT
T ss_pred hHHHHHhcc--------CCCCCCCccccccHHHHHHHHHHhccccCcccccccceEEEEeCC-HHHHHHHHHHHHHHHHC
Confidence 999998842 134679999999999999988632 222234567889999986 77889999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|++|++++...+++++++++|++.|++|+||+|++|+++|+|+||||.+|+|..|++++++++|+++++
T Consensus 393 Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 461 (464)
T 4g84_A 393 GIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 461 (464)
T ss_dssp TCCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECchhhhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 999998776567899999999999999999999999999999999999999999999999999999875
No 5
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=100.00 E-value=1.4e-61 Score=579.36 Aligned_cols=409 Identities=17% Similarity=0.230 Sum_probs=348.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++... |....++||+|.|++|+.++||||+|+|+
T Consensus 7 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~~~em~~~~D~~g~~l~LrPd~t~~~ 86 (434)
T 1wu7_A 7 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 86 (434)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCCccccceEEEECCCCCEEEeCCCChHHH
Confidence 57899999999999999999999999999999999999999 34443 66778999999999999999999999999
Q ss_pred HHHHHhCCC--CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCc-eEEEeCcH
Q 000993 814 IRWAISNQK--SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAES-CDIHLNHG 889 (1196)
Q Consensus 814 aR~~a~~~~--~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~-~~i~Lg~~ 889 (1196)
||++++++. .|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.||++ + +.|+|||+
T Consensus 87 aR~~~~~~~~~lP~rl~~~g~vfR~erp~~gR~REF~Q~d~ei~g~~~~~ad~E~i~~~~~~l~~lgl~-~~~~i~l~~~ 165 (434)
T 1wu7_A 87 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQ-DIYEIRINSR 165 (434)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEH
T ss_pred HHHHHhcCCCCCCeEEEEEcCeecCCCCCCCCccceEEeeEEEEcCCChHhhHHHHHHHHHHHHHcCCC-CceEEEECCh
Confidence 999998743 6999999999999999886655 59999999999999999999999999999999995 5 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
+++.++++.+| +++++ .++.+++++++ ..+++++..+ ...++.+..++.+.+++ ...++..+ ++++
T Consensus 166 g~~~~~~~~~g-~~~~~-~l~~~l~~~~~---------~~~~~~~~~l-~~~~l~~~~~~~~~~~~-~~~~~~~~-l~~~ 231 (434)
T 1wu7_A 166 KIMEEIIGGMT-SSDPF-SVFSIIDRYHK---------ISREEFVDQL-RSAGIGEDGVSMIADLC-SGTRGIDE-MARI 231 (434)
T ss_dssp HHHHHHHHTTC-SSCHH-HHHHHHHTTTT---------SCHHHHHHHH-HHTTCCHHHHHHHHHHH-HSCBCHHH-HHHH
T ss_pred hhHHHHHHHhC-cHhHH-HHHHHHHHHhc---------cchHHHHHHH-HhCCCCHHHHHHHHHHH-HhCCCHHH-HHHH
Confidence 99999998676 77777 88888988773 3455654444 55889988899999988 34555444 6655
Q ss_pred hccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhc
Q 000993 970 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1047 (1196)
Q Consensus 970 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1047 (1196)
+ .......+.++++ ++..+|+. +|.||++++|+++||||++|++|..+ +.+.+||+|||||+|++.|
T Consensus 232 ~---~~~~~~~~~l~~~~~~l~~~g~~-~i~~D~~l~rgldYYtg~vFe~~~~~-------g~~~~v~~GGRYD~li~~f 300 (434)
T 1wu7_A 232 T---GKSSEEIARMAAVEDLLASYGVK-NVRYDFSIVRGLSYYTGIVFEAYDRS-------GQFRAILGGGRYDNLASLM 300 (434)
T ss_dssp T---TCCCHHHHHHHHHHHHHHHTTCC-CCEECTTCCTTTTTCSSEEEEEEETT-------SSCSCSSEEEECTTHHHHH
T ss_pred H---hhHHHHHHHHHHHHHHHHHcCCC-EEEECCCcccCccccCCeEEEEEECC-------CCcCeeeecccHHHHHHHh
Confidence 5 1222445556666 77888986 79999999999999999999999752 1234799999999999999
Q ss_pred cccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCC
Q 000993 1048 WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127 (1196)
Q Consensus 1048 g~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~ 1127 (1196)
|++ +.||+|||||+|||+.+|.+..... +..+.+|+|++.+ ++...+|.+++++||++|++|++++.
T Consensus 301 gg~----------~~pa~Gf~igveRl~~~l~e~~~~~-p~~p~~v~v~~~~-~~~~~~a~~l~~~Lr~~Gi~v~~d~~- 367 (434)
T 1wu7_A 301 SGE----------SVPAVGFGMGDAVISLLLKRENVQI-PREKKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM- 367 (434)
T ss_dssp HSC----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCSSCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-
T ss_pred CCC----------CCCeEEEEEcHHHHHHHHHhcCCcc-CCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC-
Confidence 653 4699999999999999887432210 2256899999986 66789999999999999999998876
Q ss_pred CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1128 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1128 ~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
++++++++++|++.|+|++|++|++|+++|+|+||++.+|++..++++++++.+++.++
T Consensus 368 ~~~~~~~~~~a~~~g~~~~iiiG~~e~~~g~v~vk~~~~~~~~~v~~~el~~~l~~~~~ 426 (434)
T 1wu7_A 368 ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQAT 426 (434)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCEEEEEGGGHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEECchhhhcCeEEEEECCCCCeEEEcHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999999999999999887654
No 6
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=100.00 E-value=5.8e-61 Score=563.69 Aligned_cols=375 Identities=16% Similarity=0.198 Sum_probs=313.7
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
+-+.|+|++|++|.++.++++|++.++++|++|||++|.||+|... ..++...++||+|.|++|+.++||||+|+|
T Consensus 9 ~~~~p~G~~d~lP~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g~~~~~~my~f~D~~g~~l~LRpd~T~~ 88 (400)
T 3od1_A 9 MFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLRPDMTAP 88 (400)
T ss_dssp TTCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHSSSCGGGSCEEECTTSCEEEECSCSHHH
T ss_pred cccCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccceEEEECCCCCEEEECCCCHHH
Confidence 3478899999999999999999999999999999999999999333 236677899999999999999999999999
Q ss_pred HHHHHHhC---CCCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISN---QKSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~---~~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||+++++ ...|+|+||+|+|||+|+||.+|. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ ++|+|||
T Consensus 89 ~aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~Ref~Q~g~ei~G~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 167 (400)
T 3od1_A 89 IARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSE-FKVAIGH 167 (400)
T ss_dssp HHHHHHHHCSSSCSCEEEEEEEEEECCCC---CCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTCCS-EEEEEEE
T ss_pred HHHHHHhhcccCCCCeEEEEEcCEEeCCCCCCCCCCccEEeEEEEECCCChHhHHHHHHHHHHHHHHCCCCc-eEEEecC
Confidence 99999885 356999999999999999886655 699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.+++++++|+++|+ . ++ ++++.+.+++++.++.+..++ .+.|.. +++++
T Consensus 168 ~~i~~~ll~~~~~~~~~~~~l~~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~ 232 (400)
T 3od1_A 168 VGYVNALLMDVVGNEQRADRLRRFLYEKNY---------V---GY-REHVKSLNLSTIDKSRLMNLL-SLRGGR-AAIEE 232 (400)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHTTCH---------H---HH-HHHHHHSSSCHHHHHHHHHGG-GCEESH-HHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCh---------h---HH-HHHHHhcCCCHHHHHHHHHHH-hccCCH-HHHHH
Confidence 999999999999999999999999999872 2 22 445666789999999999998 567764 58888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+. .+....+++++| +++.+|+.+++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 233 ~~~l~-~~~~~~~~l~~l~~l~~~L~~~gi~~~~~~D~~lvRgldYYTG~vFe~~~~~~g~--------~i~~GGRYD~L 303 (400)
T 3od1_A 233 ARGLI-QTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGV--------PLCSGGRYDEL 303 (400)
T ss_dssp HHTTC-CSHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCSCSSSCCSEEEEEEETTCSS--------EEEEEEECTTH
T ss_pred HHhhh-cChhhHHHHHHHHHHHHHHHHcCCCceEEEeCCccCCCcccCCeEEEEEECCCCC--------eeecccccchh
Confidence 88743 455666666666 78899998889999999999999999999999987543 79999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
++.||+ ++||||||+|+|||+.+|....... ...+++|+. + ++...+|+++|++||++|++|++
T Consensus 304 ~~~fG~-----------~~pavGfaiglerL~~~l~~~~~~~---~~~~v~v~~-~-~~~~~~a~~~a~~LR~~G~~v~~ 367 (400)
T 3od1_A 304 LSKFHR-----------PAQATGFGVRIDLLVEALNGEIISN---GHEQTCILF-S-NERRFEAIELARKKRANGEAVVL 367 (400)
T ss_dssp HHHTTC-----------CCCEEEEEEEHHHHHHHHCC---------CCCEEEEE-C-GGGHHHHHHHHHHHHTTTCCEEE
T ss_pred hhccCC-----------CCCEEEEEeeHHHHHHHHHhcCCCC---CCCeEEEEE-C-cHHHHHHHHHHHHHHHCCCEEEE
Confidence 999865 2699999999999999887432211 123366654 3 56788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQK 1156 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~ 1156 (1196)
...... +.. ||.++|+..++++.+.+-+.
T Consensus 368 ~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~ 396 (400)
T 3od1_A 368 QDLAGV--TDV--DAMSSNYQDVIYCIGTAGRG 396 (400)
T ss_dssp EEGGGC--SCH--HHHHTTSSEEEEECSCC---
T ss_pred EecCCh--hHH--HHHHcCCCEEEEEecCCCCC
Confidence 876432 222 99999999999998876543
No 7
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-59 Score=563.71 Aligned_cols=397 Identities=17% Similarity=0.210 Sum_probs=306.5
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cc---ccccceEEEeecC-CceEeecCC
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHG-GDLLELSHE 808 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~-G~~laLRPD 808 (1196)
-+.++|++||+|.++.++++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++ |+.++||||
T Consensus 32 ~~~~~G~~d~lP~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~~g~~l~LRPd 111 (467)
T 4e51_A 32 LTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPE 111 (467)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTTTCCEEEECSC
T ss_pred CCCCCCceeeCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCCCCCEEEeCcc
Confidence 467899999999999999999999999999999999999999 33222 33 3678999999999 999999999
Q ss_pred CcHHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 809 LRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 809 ~T~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
+|+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 112 ~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~~~~adaEvi~l~~~~l~~lGl~~-~~i 190 (467)
T 4e51_A 112 NTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTG-IKL 190 (467)
T ss_dssp SHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCCCSHHHHHHHHHHHHHHHHHTCCC-EEE
T ss_pred cHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCCChHHHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999998754 35999999999999999886554 699999999999999999999999999999999986 999
Q ss_pred EeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHH----HHHHHhcC
Q 000993 885 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ----TVGLRFCG 960 (1196)
Q Consensus 885 ~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~----~l~~~~~g 960 (1196)
+|||++..+.. +..++.+..++.... ..++++..+.+. .++.....
T Consensus 191 ~in~~g~~~~~-------~~~~~~l~~~l~~~~-----------------------~~l~~~~~~~l~~~~l~~ld~k~~ 240 (467)
T 4e51_A 191 EINSLGLAEER-------AAHRVELIKYLEQHA-----------------------DKLDDDAQRRLYTNPLRVLDTKNP 240 (467)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHHTTG-----------------------GGCCHHHHHHHTTCTHHHHTCCCG
T ss_pred EEeCCCchhhh-------HHHHHHHHHHHHHHH-----------------------hccCHHHHHHHHhchHHHhhccch
Confidence 99996543211 112333333333210 112222222211 11100000
Q ss_pred ChhhHHHHHhccCC-CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 961 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
...++++.+..+.. .+....+.+++| +|+.+|+. +.||++++||++||||+|||+|..+.+. +++||+|
T Consensus 241 ~~~~~l~~a~~l~~~l~~~~~~~l~~l~~~L~~~gi~--~~~d~~lvRgl~YYtg~vFe~~~~~~g~------~~tI~~G 312 (467)
T 4e51_A 241 ALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVP--FTINPRLVRGLDYYNLTVFEWVTDKLGA------QGTVAAG 312 (467)
T ss_dssp GGHHHHHTSCCGGGGCCHHHHHHHHHHHHHHHHTTCC--EEECTTCCCSCTTCCSEEEEEEECC----------CEEEEE
T ss_pred hHHHHHhhhHHHHHhhhHHHHHHHHHHHHHHHHcCCe--EEEcCccccCccccCCeEEEEEECCCCC------cceecCC
Confidence 00112222211111 134456677777 78889984 9999999999999999999999986542 3589999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
||||+|++.||++ +.|||||++++|||+.+|.+..... ...+.+|+|++.+ ++...+|++++++||++
T Consensus 313 GRYD~Lv~~~g~~----------~~PavGfa~gleRl~~~l~~~~~~~-~~~p~~V~Vip~~-~~~~~~A~~ia~~LR~~ 380 (467)
T 4e51_A 313 GRYDPLIEQLGGK----------PTAACGWAMGIERILELLKEEHLVP-EQEGVDVYVVHQG-DAAREQAFIVAERLRDT 380 (467)
T ss_dssp EECTHHHHHTTSS----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCCCCSEEEEECS-HHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHhCCC----------CCCceeehHHHHHHHHHHHhcCCcc-cCCCCeEEEEEcC-hHHHHHHHHHHHHHHHc
Confidence 9999999999764 4699999999999999987433221 2456899999986 66788999999999999
Q ss_pred CCeEEEeeCC---CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC-C------cccccchHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVP---DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV-K------KEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1118 Gi~vel~~~~---~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~-g------~q~~v~~~el~~~l~~~l 1185 (1196)
|++|++++.. ++++++++++|++.|++|+|++|++|+++|+|+||||.+ + +|..++++++++.|++.+
T Consensus 381 Gi~ve~d~~~~~~~~sl~kq~~~A~~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~ 458 (467)
T 4e51_A 381 GLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM 458 (467)
T ss_dssp TCCEEECCCTTSSCCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred CCeEEEEcccccccCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence 9999987763 479999999999999999999999999999999999999 8 999999999999999887
No 8
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=100.00 E-value=6.3e-56 Score=528.94 Aligned_cols=398 Identities=15% Similarity=0.187 Sum_probs=303.4
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-C---cccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++... | +...++||+|.|++|+.++||||+|
T Consensus 4 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 83 (421)
T 1h4v_B 4 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 83 (421)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEEECCCCCEEeeCCcch
Confidence 57899999999999999999999999999999999999999 33333 3 3467899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 811 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+++ +.|+
T Consensus 84 ~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~p~~gR~REf~Q~g~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~-~~i~ 162 (421)
T 1h4v_B 84 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 162 (421)
T ss_pred HHHHHHHHhccccccCCCeEEEEecCeecCCCCCCCCcccEEEccEEEECCCChhhhHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999998652 46999999999999999886654 699999999999999999999999999999999985 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCCh
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMM-GSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 962 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~-d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 962 (1196)
|||++..... +..++.+..++... +.+. . +....+. ..++. ....+.+.+++..+.+
T Consensus 163 i~~~g~~~~~-------~~~~~~l~~~l~~~~~~l~------~----~~~~~l~-~~~~~~l~~~~~~~~~~~~~~~~-- 222 (421)
T 1h4v_B 163 LSSVGDPEDR-------ARYNAYLREVLSPHREALS------E----DSKERLE-ENPMRILDSKSERDQALLKELGV-- 222 (421)
T ss_pred EcCCCchhhH-------HHHHHHHHHHHHHHHhhcC------H----HHHHHHH-hcchHhhhcccHHHHHHHHhcCh--
Confidence 9996532210 01112222222211 1010 0 0101111 00000 0000011122100001
Q ss_pred hhHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 963 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 963 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
.++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|++|..+.+ ...+||+||||
T Consensus 223 ----~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 288 (421)
T 1h4v_B 223 ----RPMLDFL--GEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIG------AQSALGGGGRY 288 (421)
T ss_pred ----HHHHHHh--hHHHHHHHHHHHHHHHHcCC--eEEEecccccchhhhcCeEEEEEecCCC------CcCccccCCcH
Confidence 0111101 12344455555 6677786 7999999999999999999999976433 23579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCC-CCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCC
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDF-KPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENI 1119 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~-~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi 1119 (1196)
|+|++.||++ ..||+|||+|+|||+.+|.+.. .+.+ ..+.+|+|++.+ ++...+|.+++++||++ +
T Consensus 289 d~l~~~fgg~----------~~pa~Gf~igieRl~~~l~e~~~~~~~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~-i 355 (421)
T 1h4v_B 289 DGLSELLGGP----------RVPGVGFAFGVERVALALEAEGFGLPE-EKGPDLYLIPLT-EEAVAEAFYLAEALRPR-L 355 (421)
T ss_pred HHHHHHhCCC----------CCCeEEEeecHHHHHHHHHhcCcCCCC-CCCCeEEEEECC-hHHHHHHHHHHHHHHhc-C
Confidence 9999988653 4699999999999999887432 2222 367889999986 56788999999999999 9
Q ss_pred eEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1120 KAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1120 ~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.+++.+
T Consensus 356 ~v~~d~~-~~~~~~~~~~a~~~g~p~~iivG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~l 420 (421)
T 1h4v_B 356 RAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQAL 420 (421)
T ss_pred EEEEecC-CCCHHHHHHHHHhCCCCEEEEECchHhhcCcEEEEECCCCCceEECHHHHHHHHHHhh
Confidence 9998876 5799999999999999999999999999999999999999999999999999987653
No 9
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=100.00 E-value=1.7e-56 Score=534.13 Aligned_cols=397 Identities=16% Similarity=0.198 Sum_probs=296.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-C---cccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.+++++++|++.++++|++|||++|.||+| ++... | +...++||+|.|++|+.++||||+|
T Consensus 5 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 84 (423)
T 1htt_A 5 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 84 (423)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEcCCCCEEEeCCCch
Confidence 57899999999999999999999999999999999999999 23222 2 3467899999999999999999999
Q ss_pred HHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCC-CCceEEE
Q 000993 811 LPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH-AESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi-~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+ ++ +.|+
T Consensus 85 ~~~aR~~~~~~~~~~~P~rl~~~g~vfR~e~p~~gR~Ref~Q~d~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~~-~~i~ 163 (423)
T 1htt_A 85 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH-VTLE 163 (423)
T ss_dssp HHHHHHHHHHTCSTTCCEEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGG-CEEE
T ss_pred HHHHHHHHhcccccCCCeEEEEEcCEecCCCCCCCccceeEEeeEEEECCCCchhhHHHHHHHHHHHHHCCCCCC-cEEE
Confidence 99999998653 56999999999999999887665 5999999999999999999999999999999999 75 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCCh
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 962 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 962 (1196)
|||++..+... ..+..+..++.. .+.+. ......+. ..++. +.....+.+++. +
T Consensus 164 i~~~g~~~~~~-------~~~~~l~~~l~~~~~~~~----------~~~~~~l~-~~~l~~l~~~~~~~~~~l~---~-- 220 (423)
T 1htt_A 164 LNSIGSLEARA-------NYRDALVAFLEQHKEKLD----------EDCKRRMY-TNPLRVLDSKNPEVQALLN---D-- 220 (423)
T ss_dssp EEECCCHHHHH-------HC------------------------------------------------------------
T ss_pred EcCCCChhhHH-------HHHHHHHHHHHHHHhccC----------HHHHHHHH-hchhHhhhcccHHHHHHHh---c--
Confidence 99954222110 001111111111 00000 00001110 00000 000001111110 0
Q ss_pred hhHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 963 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 963 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
..++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|++|..+.+ ...+||+||||
T Consensus 221 ---~~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 287 (423)
T 1htt_A 221 ---APALGDYL--DEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLG------SQGTVCAGGRY 287 (423)
T ss_dssp ----------C--CHHHHHHHHHHHHHHHTTTC--CCEECTTCCCSSTTCCSEEEEEECC----------CCEEEEEEEC
T ss_pred ---chHHHhhh--hHHHHHHHHHHHHHHHHcCC--eEEEccccccchHHHcCceEEEEeCCCC------CcCCcCCCccH
Confidence 01111111 23344555555 6677776 6999999999999999999999975432 23579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc--
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE-- 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~-- 1117 (1196)
|+|++.||++ +.||||||+|+|||+.+|.+ +..+. ...+.+|+|++.+ ++...+|.+++++||++
T Consensus 288 D~l~~~fgg~----------~~pavGf~igveRl~~~l~e~~~~~~-~~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~~~ 355 (423)
T 1htt_A 288 DGLVEQLGGR----------ATPAVGFAMGLERLVLLVQAVNPEFK-ADPVVDIYLVASG-ADTQSAAMALAERLRDELP 355 (423)
T ss_dssp TTHHHHTTSC----------CCCEEEEEEEHHHHHHHHHHHSTTCC-CCCSCSEEEEECS-TTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCCC----------CCCeEEEEecHHHHHHHHHhcCcCCC-CCCCCcEEEEEcC-HHHHHHHHHHHHHHHcCCC
Confidence 9999998643 46999999999999998874 32222 2367799999986 56789999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.+++.+
T Consensus 356 Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~~ 422 (423)
T 1htt_A 356 GVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLL 422 (423)
T ss_dssp TCCEEECCS-CCCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCCceEEcHHHHHHHHHHhh
Confidence 999998876 5799999999999999999999999999999999999999999999999999987653
No 10
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=2.3e-54 Score=503.22 Aligned_cols=304 Identities=19% Similarity=0.183 Sum_probs=257.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccc-cceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFK-RNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~-~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++...++... ++||+|.|++|+.++||||+|+|+
T Consensus 24 ~~p~G~~d~lP~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g~~~~~~~my~~~D~~g~~l~LRpd~T~~~ 103 (373)
T 3rac_A 24 DRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAVALRPEMTPSI 103 (373)
T ss_dssp CCCTTCCCCCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTSCTTSCCCCCBCCCCSSSCEEECSSSHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcCCccchhceEEEECCCCCEEEECCcCHHHH
Confidence 67899999999999999999999999999999999999999 3334466667 899999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeeecCCC------CCCC-cceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCce
Q 000993 814 IRWAISN---QKSSFKRYEISSVYRRAIG------HSPP-NRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESC 882 (1196)
Q Consensus 814 aR~~a~~---~~~P~r~~Y~G~VfR~e~~------~~~~-~ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~ 882 (1196)
||+++++ ...|+|+||+|+|||+|++ +.+| |||+|+|+|+||.+ ++.+|+|||.++.++|+.+|+++ +
T Consensus 104 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d~~~aDaEvi~l~~~~l~~lgl~~-~ 182 (373)
T 3rac_A 104 ARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRH-H 182 (373)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCS-C
T ss_pred HHHHHhccccCCCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCCCHHHHHHHHHHHHHHHHHcCCCc-e
Confidence 9999885 4579999999999999988 6555 46999999999999 89999999999999999999985 9
Q ss_pred EEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC--
Q 000993 883 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG-- 960 (1196)
Q Consensus 883 ~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g-- 960 (1196)
+|+|||+++++++++.+|++++++++++++|+++| +.++.++..++ +++.++.+..++ .+.|
T Consensus 183 ~i~l~~~~i~~~ll~~~g~~~~~~~~l~~~l~k~~---------~~~~~~~~~~l------~~~~~~~l~~l~-~l~g~~ 246 (373)
T 3rac_A 183 RIVVSHARLVPRLLDALGISASLSRAFLACLTSGN---------YVQFRELWQLH------AAKDVDLLANLL-TWSPAE 246 (373)
T ss_dssp EEEEEETTHHHHHHHHTTCCHHHHHHHHHHHHHTC---------HHHHHHHHHHH------CSCCSCHHHHHH-HBCCCS
T ss_pred EEEecCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---------hhhHHHHHHhc------CHHHHHHHHHHH-HHhCCc
Confidence 99999999999999999999999999999999988 44444444333 334456666777 4666
Q ss_pred ---------ChhhHHHHHhccCCCChHH----HHHHHHH-----HHHHcCC-CceEEEcCCCCCCCCCccceEEEEEecC
Q 000993 961 ---------AADQALPRLRGALPADKPT----RKALDEL-----YLRIWRI-EKNIYIDALMPPIESYHRNLFFQVFSVK 1021 (1196)
Q Consensus 961 ---------~~~~~l~~l~~~~~~~~~~----~~~l~~L-----~l~~~g~-~~~i~~Dl~lvrgl~YYTG~vFe~~~~~ 1021 (1196)
...++++++..+.. +... .+++++| +++.+|+ .+++.||++++||++||||+|||+|..+
T Consensus 247 ~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~al~~l~~l~~~L~~~gi~~~~i~~D~~lvRgldYYTG~vFe~~~~~ 325 (373)
T 3rac_A 247 RDAAKRSREASDRELEALLRDAV-DPRAAADVRDAWRYLCRLAEALHDSGLASDVVTFDLALHRELDYYTGLVFEMFAPG 325 (373)
T ss_dssp SCTTSBCHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEECTTCCCSCTTCCSEEEEEECTT
T ss_pred cccccccccccHHHHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHcCCCCceEEEeCCccCCCCccCCeEEEEEECC
Confidence 14578888888544 4444 5666666 7888899 7889999999999999999999999987
Q ss_pred CCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1022 EKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1022 ~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
.+. +||+|||||+|++.||+ ++||||||+|+|||+.+|.
T Consensus 326 ~g~--------~i~~GGRYD~L~~~fG~-----------~~pAvGFaiglerL~~~l~ 364 (373)
T 3rac_A 326 VGA--------PIAQGGRYDELLAQFGA-----------GAPAVGFAFEVERVMAVLE 364 (373)
T ss_dssp CSS--------CSEEEEECTTTTGGGTC-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CCC--------eEeecccccHHHHhhCC-----------CCCeEEEEEEHHHHHHHHH
Confidence 543 79999999999998864 3699999999999999876
No 11
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=100.00 E-value=1.8e-52 Score=499.11 Aligned_cols=395 Identities=16% Similarity=0.192 Sum_probs=291.6
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC----CcccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD----CPQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~----~~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.++|++|++|.++.+++.|++.++++|++|||++|.||+| ++... .+...++||+|.|++|+.++||||+|
T Consensus 3 ~~~~G~~~~~p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D~~g~~~~Lrp~~t 82 (420)
T 1qe0_A 3 KIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGT 82 (420)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEcCCCCEEEeCCCCh
Confidence 57899999999999999999999999999999999999999 23222 23567899999999999999999999
Q ss_pred HHHHHHHHhC-----CCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 811 LPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 811 ~~iaR~~a~~-----~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
++++|+++++ ...|+|+||+|+|||+|+|+.+| +||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 83 ~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~reF~q~~~e~~~~~~~~~d~e~i~~~~~~l~~lgl~~-~~i 161 (420)
T 1qe0_A 83 AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LKL 161 (420)
T ss_dssp HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EEE
T ss_pred HHHHHHHHhccccccCCCCeEEEEecCEeecCCCcCCCcccEEEeeEEEECCCCchhHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999864 35699999999999999887655 4699999999999999999999999999999999985 999
Q ss_pred EeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh---cC-
Q 000993 885 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF---CG- 960 (1196)
Q Consensus 885 ~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~---~g- 960 (1196)
+|||.+....- +..++.+..++.... ..+++...+.+...+..+ .+
T Consensus 162 ~l~~~g~~~~~-------~~~~~~l~~~~~~~~-----------------------~~l~~~~~~~l~~~~~~~l~~~~~ 211 (420)
T 1qe0_A 162 VINSVGDMASR-------KEYNEALVKHFEPVI-----------------------HEFCSDCQSRLHTDPMRILDCKVD 211 (420)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHGGGG-----------------------GGSCHHHHHTTTTCGGGGC-----
T ss_pred EEcccCchhhH-------HHHHHHHHHHHHHHH-----------------------hhhCHHHHHHHHhcchhhhcccch
Confidence 99995422110 011222222222210 001111111000000000 00
Q ss_pred ChhhHHHHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 961 AADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 961 ~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
...++++.+..+. ..+....+.+++| +++.+|+ .+.+|++++|+++||||++|+++..+... .+..++|++|
T Consensus 212 ~~~~~~~~a~~l~~~l~~~~~~~l~~l~~~l~~~gi--~~~~d~~l~rg~~yYtg~vfe~~~~~~~~---~g~~~~i~~G 286 (420)
T 1qe0_A 212 RDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPNY---DGAITTLCGG 286 (420)
T ss_dssp -------CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTTS---TTSEEEEEEE
T ss_pred hHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEECcccccchhhhcCeEEEEEEcCCCC---CCCcCccccC
Confidence 0001111111110 0133455666777 7777887 58999999999999999999999875400 0123579999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1116 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~ 1116 (1196)
||||+|++.||++ .+|||||++|+|||+.+|++ +...+. .++.+|+|++.+ ++...+|.+++++||+
T Consensus 287 gRYd~l~~~~g~~----------~~P~vg~~igveRl~~~le~~~~~~p~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~ 354 (420)
T 1qe0_A 287 GRYNGLLELLDGP----------SETGIGFALSIERLLLALEEEGIELDI-EENLDLFIVTMG-DQADRYAVKLLNHLRH 354 (420)
T ss_dssp EEEESHHHHTTCC----------CCEEEEEEEEHHHHHHHHHHTTCCCCC-CCCCSEEEEECH-HHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHhCCC----------CCCEEEEEecHHHHHHHHHhcCCCCCC-CCCCeEEEEEeC-HHHHHHHHHHHHHHHH
Confidence 9999999988653 46999999999999998863 222221 567889999885 5677899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1117 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1117 ~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
+|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.|+
T Consensus 355 ~Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiig~~e~~~~~v~vk~~~~~~~~~v~~~~l~~~l~ 419 (420)
T 1qe0_A 355 NGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419 (420)
T ss_dssp TTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCCEEEECTTHHHHHHH
T ss_pred CCCEEEEecC-CCCHHHHHHHHHHcCCCEEEEECcchhhcCeEEEEECCCCCeEEEcHHHHHHHHh
Confidence 9999998876 5799999999999999999999999999999999999999999999999998875
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.1e-53 Score=473.60 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=205.0
Q ss_pred CCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeee
Q 000993 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFE 451 (1196)
Q Consensus 373 ~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e 451 (1196)
.++.+..+++|++++.||+|+||+||+|+++.+|+.||||+++..... .....++.+|+.+|+.++|||||+++++|.
T Consensus 5 ~l~~G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~- 83 (275)
T 3hyh_A 5 SLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK- 83 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred CCCCCCEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-
Confidence 344556678999999999999999999999999999999999765432 234567999999999999999999999873
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
+...+|||||||+|+|.+++.+.+++++.+++.++.||+.|
T Consensus 84 ---------------------------------------~~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~a 124 (275)
T 3hyh_A 84 ---------------------------------------SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ---------------------------------------CSSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ECCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 24678999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+|||++.++++||+|||+|+...... ..++.+||+.|||||++.+...
T Consensus 125 l~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------------------------CTTSCHHHHSSSSC
T ss_pred HHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC----------------ccCCeeECcccCChhhhcCCCC
Confidence 999999999999999999999999999999999998653211 1245689999999999998555
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||+||||++ ||......+....+......+| ...++++++||++||+.||.+|||++|+++|||
T Consensus 189 ~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 6789999999999999997 8987766655555544433333 346789999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
|+.
T Consensus 266 ~k~ 268 (275)
T 3hyh_A 266 FKV 268 (275)
T ss_dssp HHT
T ss_pred ccc
Confidence 864
No 13
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-52 Score=477.18 Aligned_cols=284 Identities=37% Similarity=0.713 Sum_probs=215.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+||+++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|+.++|||||+++++|.+.....
T Consensus 1 GR~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp CHHHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred CCcchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 478889999999999999999999999999999999997654 3344567999999999999999999999997643110
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL 532 (1196)
. ........++|||||||+ |+|.+++..... .++..++.++.||+.||
T Consensus 80 ~----------------------------~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al 131 (299)
T 4g31_A 80 K----------------------------LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131 (299)
T ss_dssp -----------------------------------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred c----------------------------ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence 0 000123457899999996 599999987654 45667899999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+||||+.++++||+|||+|+.+........... ........++.+||+.|||||++.+ ..|
T Consensus 132 ~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~---~~~~~~~~~~~~GT~~YmAPE~~~~-~~y 207 (299)
T 4g31_A 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYARHTGQVGTKLYMSPEQIHG-NSY 207 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-----------------------------CCCTTSCHHHHTT-CCC
T ss_pred HHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccccc---ccccccccCCcccCccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999998754332211100 0011123456789999999999998 579
Q ss_pred CCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 613 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 613 s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+.++|||||||+||||++||....+....+..+. ....|+.+...++.+.+||++||+.||.+|||+.++++|+||+..
T Consensus 208 ~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 208 SHKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999999987665444443333 556677777778889999999999999999999999999999987
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
.+
T Consensus 287 ~~ 288 (299)
T 4g31_A 287 DF 288 (299)
T ss_dssp --
T ss_pred CC
Confidence 54
No 14
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=100.00 E-value=7.7e-53 Score=486.12 Aligned_cols=298 Identities=16% Similarity=0.247 Sum_probs=253.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec----CCCcccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL----GDCPQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..+++|++.++++|++|||++|.||+| ++. +.++...++||+|.|++|+.++||||+|
T Consensus 23 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~~g~~l~LRpd~T 102 (344)
T 1z7m_A 23 LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFT 102 (344)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECCCCCEEecCCCCc
Confidence 67899999999999999999999999999999999999999 332 3466788999999999999999999999
Q ss_pred HHHHHHHHhCC-CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 811 LPFIRWAISNQ-KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 811 ~~iaR~~a~~~-~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+++ ++|+|||
T Consensus 103 ~~~aR~~~~~~~~~P~rl~y~g~vfR~e~p~~gR~REF~Q~g~ei~g~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 181 (344)
T 1z7m_A 103 LPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGS 181 (344)
T ss_dssp HHHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEECcEEccCCCCCCCcceeEEEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCCc-EEEEECC
Confidence 99999999874 46999999999999999886655 699999999999999999999999999999999986 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
++++++++ |++++.+.+++++|+++++ . ++ ++++.+.+++++.++.+..++ .+ |+. +++++
T Consensus 182 ~gi~~~~l---g~~~~~~~~l~~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~-g~~-~~l~~ 242 (344)
T 1z7m_A 182 AKFFQRLC---QLADGSTELLTELLLKKDL---------S---GL-NAFIEKNNFSKELRGLLKEIF-IT-NEL-SRLEN 242 (344)
T ss_dssp HHHHHHHH---HHTTTCHHHHHHHHHTTCH---------H---HH-HHHHTTSCCCHHHHHHHHHHT-TC-CCH-HHHHH
T ss_pred HHHHHHHh---CCCHHHHHHHHHHHHhhCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-hc-CCH-HHHHH
Confidence 99999988 6777778889999998873 2 22 445556789999999999998 46 764 78888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+.. +....+++++| +++.+| ++.||++++||++||||+|||+|..+.+ .+||+|||||+|
T Consensus 243 ~~~l~~-~~~~~~~l~~l~~l~~~L~~~g---~~~~D~~lvrgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~L 310 (344)
T 1z7m_A 243 LVTNTK-DDVLISSFDQLKEFSEKLSMIK---PIIIDLGMVPKMDYYTDLMFKAYSSAAN--------QPILSGGRYDQL 310 (344)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHHHHTTTS---CCEECTTCCCSSTTCCSEEEEEEETTEE--------EEEEEEEECHHH
T ss_pred HHHhhc-chhhHHHHHHHHHHHHHHhhCC---CEEEeCCCCCCCccCCCeEEEEEECCCC--------CeEeeCccHHHH
Confidence 887543 45566666666 555556 7999999999999999999999987543 379999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
++.|| + ++||||||+|+|||+.+|.
T Consensus 311 ~~~fg-~----------~~pavGfaiglerl~~~l~ 335 (344)
T 1z7m_A 311 LSNFQ-E----------EAFAIGFCCHMDTILKALE 335 (344)
T ss_dssp HHTSS-S----------CCCCEEEEEEHHHHHHHHH
T ss_pred HHHhC-C----------CCCeEEEEEEHHHHHHHHH
Confidence 99886 2 4799999999999998876
No 15
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6e-53 Score=479.72 Aligned_cols=263 Identities=29% Similarity=0.464 Sum_probs=226.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.
T Consensus 29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------ 102 (311)
T 4aw0_A 29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ------ 102 (311)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE------
T ss_pred CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999975321 1223567999999999999999999999883
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+..++|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+||
T Consensus 103 ----------------------------------~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~yl 148 (311)
T 4aw0_A 103 ----------------------------------DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148 (311)
T ss_dssp ----------------------------------CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3567899999997 59999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||||+.++++||+|||+|+.+..... .....+.+||+.|||||++.+ ..|+.+
T Consensus 149 H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~-------------~~~~~~~~GTp~YmAPEvl~~-~~y~~~ 214 (311)
T 4aw0_A 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-------------QARANSFVGTAQYVSPELLTE-KSACKS 214 (311)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-------------CCCBCCCCSCGGGCCHHHHHH-SCBCHH
T ss_pred HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-------------cccccCcccCcccCCHHHHcC-CCCCcH
Confidence 999999999999999999999999999999987532210 112356799999999999998 569999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH------HHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e------iL~~ 686 (1196)
+|||||||+||||++ ||......+....+......+|. ..++++++||++||+.||.+|||++| |++|
T Consensus 215 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 999999999999996 99887777777666665555553 46789999999999999999999887 6899
Q ss_pred cCCCCchHHHH
Q 000993 687 ALPPQMEYELL 697 (1196)
Q Consensus 687 ~~~~~~~~~~~ 697 (1196)
|||.++.|+.+
T Consensus 292 p~F~~idw~~l 302 (311)
T 4aw0_A 292 PFFESVTWENL 302 (311)
T ss_dssp GGGTTCCCTTG
T ss_pred CCcCCCCHHHh
Confidence 99999877643
No 16
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-51 Score=465.92 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=214.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.++||+|+||+||+|+++.++..||||++..........+.+.+|+.+|+.++|||||+++++|....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--------- 98 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 98 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---------
Confidence 46778899999999999999999999999999876666666778999999999999999999999984321
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 539 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g-- 539 (1196)
.....+|||||||+ |+|.+++.+...+++..++.++.||+.||+|||++|
T Consensus 99 ---------------------------~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 99 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp ---------------------------TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999999999999999999999999999999998
Q ss_pred CcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||||||||+||||+. ++++||+|||+|+..... ..++.+||+.|||||++.+ .|+.++||
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-----------------~~~~~~GTp~YmAPE~~~~--~y~~~~Di 212 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 212 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC-----------------ccCCcccCccccCHHHcCC--CCCcHHHH
Confidence 999999999999985 799999999999753211 1245689999999999976 59999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||+||||+| ||............+......+......++++++||.+||+.||.+|||+.++|+||||++
T Consensus 213 wSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 213 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999999997 8876555554444444332222334456789999999999999999999999999999975
No 17
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.4e-52 Score=482.31 Aligned_cols=255 Identities=31% Similarity=0.591 Sum_probs=216.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||+++.........+.+.+|+.+|+.++|||||+++++|.+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------- 94 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------- 94 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 589999999999999999999999999999999998776666667889999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++... ..+++.+++.|+.||+.||+|||
T Consensus 95 --------------------------------~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 95 --------------------------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999754 35799999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++
T Consensus 143 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~l~~-~~y~~~~ 206 (350)
T 4b9d_A 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---------------ELARACIGTPYYLSPEICEN-KPYNNKS 206 (350)
T ss_dssp HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH---------------HHHHHHHSCCTTCCHHHHTT-CCCCHHH
T ss_pred HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc---------------ccccccCCCccccCHHHHCC-CCCCcHH
Confidence 9999999999999999999999999999998754221 01235689999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||+||||++ ||......+....+.. ...|+.+...++++++||.+||+.||.+|||++++|+|+|+.+.
T Consensus 207 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 99999999999997 9988777666665554 34455566778899999999999999999999999999998653
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.3e-52 Score=476.65 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=217.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 142 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 142 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEE---------
Confidence 5799999999999999999999999999999999865433 23568899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|||||||+| +|.+++.. .++++.+++.++.||+.||+|||++|
T Consensus 143 -------------------------------~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~ 190 (346)
T 4fih_A 143 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 190 (346)
T ss_dssp -------------------------------TTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4578999999975 89998865 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 254 (346)
T 4fih_A 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 254 (346)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHH
T ss_pred cccccCCHHHEEECCCCCEEEecCcCceecCCCC---------------CcccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12346799999999999987 5699999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+||||++ ||......+....+........+.+...++++++||.+||+.||.+|||++|+|+||||.+.
T Consensus 255 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 255 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 99999999997 88877666655544443333445667788999999999999999999999999999999754
No 19
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-51 Score=468.06 Aligned_cols=258 Identities=28% Similarity=0.422 Sum_probs=214.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++++.||+|+||+||+|++. .+++.||||+++..........++.+|+.+|+.++|||||+++++|.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 68999999999999999999984 468899999997543333333468899999999999999999998832
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||
T Consensus 98 ----------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 98 ----------------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp ----------------------------------TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+|+...... ....+.+||+.|||||++.+ ..|+.++
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~~~~-~~y~~~~ 207 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSA 207 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------CCCCSCCCCGGGCCHHHHHT-SCCCTHH
T ss_pred HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------ccccccccCcccCCHHHhcc-CCCCCCC
Confidence 9999999999999999999999999999998643211 12345789999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|||||||+||||++ ||......+....+......+| ...++++++||++||+.||.+||| ++++++|||
T Consensus 208 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred cccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 99999999999997 9988777776666665444444 346789999999999999999998 589999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|..+.|+.+
T Consensus 285 f~~idw~~l 293 (304)
T 3ubd_A 285 FSTIDWNKL 293 (304)
T ss_dssp GTTCCHHHH
T ss_pred ccCCCHHHH
Confidence 999987644
No 20
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=477.72 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=217.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 219 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 219 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEE---------
Confidence 5799999999999999999999999999999999865433 23568899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|||||||+| +|.+++.. .++++.+++.++.||+.||+|||++|
T Consensus 220 -------------------------------~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~ 267 (423)
T 4fie_A 220 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 267 (423)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4578999999974 89998864 56999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
||||||||+||||+.+|++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 331 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 331 (423)
T ss_dssp EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---------------CCBCCCEECTTTCCHHHHTT-CCBCTHHHHH
T ss_pred eecccCCHHHEEEcCCCCEEEecCccceECCCCC---------------ccccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12356799999999999988 5799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+||||++ ||......+....+........+.+...++++++||++||+.||.+|||+.|+|+|+||.+.
T Consensus 332 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 332 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 99999999997 88877666655544433333344566788999999999999999999999999999999753
No 21
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=469.83 Aligned_cols=267 Identities=25% Similarity=0.390 Sum_probs=221.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++|||||++++++....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 126 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV------- 126 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS-------
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc-------
Confidence 5799999999999999999999999999999999766555556678999999999999999999999874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+...+|||||||+|+|.+++...+++++.+++.++.||+.||+|||++||
T Consensus 127 ---------------------------~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i 179 (398)
T 4b99_A 127 ---------------------------PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179 (398)
T ss_dssp ---------------------------CTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------------------ccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 01234678999999999999999999999999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
|||||||+|||++.++.+||+|||+|+.+...... .....++.+||+.|||||++.+...|+.++||||
T Consensus 180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS 248 (398)
T 4b99_A 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-----------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248 (398)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCBCC------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred cCCCcCccccccCCCCCEEEeecceeeecccCccc-----------cccccccceeChHhcCHHHhcCCCCCCChhheeh
Confidence 99999999999999999999999999865322111 0112356799999999999988667899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC------------------------c----cccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------S----WVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~----~~~~~~~l~~LI~~c 669 (1196)
+|||+|||++ ||.+....+....+....+..+. . +...++++.+||++|
T Consensus 249 lG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m 328 (398)
T 4b99_A 249 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRM 328 (398)
T ss_dssp HHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 88776665555444332222111 1 124567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|..||.+|||+.++|+||||.+.
T Consensus 329 L~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 329 LRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp SCSSTTTSCCHHHHTTSGGGTTT
T ss_pred CcCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999864
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2e-50 Score=464.19 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~-------- 121 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVRE-------- 121 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEE--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 4679999999999999999999999999999999985432 2469999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||++
T Consensus 122 --------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 169 (336)
T 4g3f_A 122 --------------------------------GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169 (336)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999997 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|||||||||+||||+.++ ++||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|
T Consensus 170 ~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~----------~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~D 238 (336)
T 4g3f_A 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK----------SLLTGDYIPGTETHMAPEVVMG-KPCDAKVD 238 (336)
T ss_dssp TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------CCCCCCGGGCCHHHHTT-CCCCTHHH
T ss_pred CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc----------ceecCCccccCccccCHHHHCC-CCCCcHHH
Confidence 999999999999999987 69999999998764322111 0112345689999999999998 57999999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+||||++ ||......+....+.......+..+...++.+.+||.+||+.||.+|||+.|+++|
T Consensus 239 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9999999999996 88766554444444443322223345677899999999999999999999999754
No 23
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-48 Score=441.05 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.++||+|+||+||+|+++ ..||||+++....+....+.|.+|+.+|++++|||||++++++.+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-------- 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-------- 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------
Confidence 368899999999999999999875 359999998766666677889999999999999999999997621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..+|||||||+ |+|.+++... .++++.++..++.||+.||+|||+
T Consensus 104 ---------------------------------~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~ 150 (307)
T 3omv_A 104 ---------------------------------DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp ---------------------------------SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23689999997 6999999754 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~k 615 (1196)
++||||||||+||||+.++++||+|||+|+....... ....+..+||+.|||||++.+. ..|+.+
T Consensus 151 ~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~k 217 (307)
T 3omv_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc-------------ceeecccccCCCccCHHHhhccCCCCCCcH
Confidence 9999999999999999999999999999986532210 1123456899999999999752 358999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||+||||+| ||............+...... +..+..+++++.+||.+||+.||.+|||+.+|+++
T Consensus 218 sDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999997 887665554444444333222 23345677899999999999999999999998754
No 24
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.1e-48 Score=437.97 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=205.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.++||+|+||+||+|++. .++..||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~---- 86 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 86 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEee----
Confidence 68999999999999999999975 3588999999864 344556789999999999999999999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------CCCCHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------DHFDKELA 521 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------~~l~e~~~ 521 (1196)
...+|||||||+ |+|.++|... ..+++.++
T Consensus 87 ------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 130 (299)
T 4asz_A 87 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130 (299)
T ss_dssp ------------------------------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHH
Confidence 346799999996 6999999754 35999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 601 (1196)
+.++.||++||+|||+++|+||||||+||||+.++++||+|||+|+....... .......+||+.||
T Consensus 131 ~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~~ym 197 (299)
T 4asz_A 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 197 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-------------EEETTTEEECGGGC
T ss_pred HHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCc-------------eeecCceecChhhc
Confidence 99999999999999999999999999999999999999999999987543221 11123457999999
Q ss_pred CchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 602 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 602 APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
|||++.+ ..|+.++|||||||+||||+| ||......+....... +..++.+..+++++.+||.+||+.||++|
T Consensus 198 APE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~~~~li~~cl~~dP~~R 274 (299)
T 4asz_A 198 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPQEVYELMLGCWQREPHMR 274 (299)
T ss_dssp CHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCCccchHHHHHHHHHHcCCChhHC
Confidence 9999998 579999999999999999986 8887766665544433 33344445677899999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
||+.+|++
T Consensus 275 Ps~~~i~~ 282 (299)
T 4asz_A 275 KNIKGIHT 282 (299)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999964
No 25
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-47 Score=436.93 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=207.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..+++++++||+|+||+||+|++. .+++.||||+++... .....++|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--- 100 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--- 100 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE---
Confidence 467889999999999999999974 357899999986432 33446789999999999999999999999843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
...+|||||||+ |+|.++|... ..++
T Consensus 101 -------------------------------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~ 143 (308)
T 4gt4_A 101 -------------------------------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143 (308)
T ss_dssp -------------------------------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCC
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCC
Confidence 345699999996 6999999643 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+.++..++.||++||+|||+++||||||||+||||++++++||+|||+|+.+...... ...+..+||
T Consensus 144 ~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-------------~~~~~~~gt 210 (308)
T 4gt4_A 144 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-------------KLLGNSLLP 210 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-------------CSSSSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCce-------------eEecccccC
Confidence 9999999999999999999999999999999999999999999999999876432211 123456899
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|||||++.+ ..|+.++|||||||+||||+| ||......+....+. .+..++.+..+++++.+||.+||+.|
T Consensus 211 ~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~C~~~d 287 (308)
T 4gt4_A 211 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR--NRQVLPCPDDCPAWVYALMIECWNEF 287 (308)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCcccchHHHHHHHHHHcCCC
Confidence 99999999988 579999999999999999986 888776665544333 34444555567889999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+|||+.+|+++
T Consensus 288 P~~RPs~~ei~~~ 300 (308)
T 4gt4_A 288 PSRRPRFKDIHSR 300 (308)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999875
No 26
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.5e-47 Score=438.01 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=200.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.++||+|+||+||+|+++ .+++.||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 114 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTE--- 114 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 368999999999999999999975 3688999999863 344556789999999999999999999999843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---------------CCCCH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------DHFDK 518 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------~~l~e 518 (1196)
...+|||||||+ |+|.++++.. .++++
T Consensus 115 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~ 157 (329)
T 4aoj_A 115 -------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157 (329)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCH
Confidence 345799999997 6999999753 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
.+++.++.||++||+|||+++||||||||+||||+.++++||+|||+|+....... ....+..+||+
T Consensus 158 ~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~ 224 (329)
T 4aoj_A 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPI 224 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------CCCCG
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCc-------------ceecCcccccc
Confidence 99999999999999999999999999999999999999999999999986532211 11224468999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||
T Consensus 225 ~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--g~~~~~p~~~~~~~~~li~~cl~~dP 301 (329)
T 4aoj_A 225 RWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GRELERPRACPPEVYAIMRGCWQREP 301 (329)
T ss_dssp GGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHCCSST
T ss_pred cccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCcccccHHHHHHHHHHcCcCh
Confidence 9999999998 679999999999999999986 8887766655544433 23344445677899999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
++|||+.+|+++
T Consensus 302 ~~RPs~~ei~~~ 313 (329)
T 4aoj_A 302 QQRHSIKDVHAR 313 (329)
T ss_dssp TTSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999875
No 27
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.8e-47 Score=467.55 Aligned_cols=259 Identities=27% Similarity=0.381 Sum_probs=215.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC----CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD----KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~----~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+++|+++++||+|+||+||+|+++.+|+.||||+++... ..........+++.+++.++|||||+++++|.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~---- 262 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH---- 262 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE----
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE----
Confidence 4689999999999999999999999999999999997532 11112222334466777889999999999883
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+..++|||||||+ |+|.+++.+.+.+++..++.|+.||+.||+
T Consensus 263 ------------------------------------~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~ 306 (689)
T 3v5w_A 263 ------------------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306 (689)
T ss_dssp ------------------------------------CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999996 599999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||||||||+||||+.+|++||+|||+|+.+... ...+.+||+.|||||++.+...|+
T Consensus 307 yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----------------~~~t~~GTp~YmAPEvl~~~~~y~ 369 (689)
T 3v5w_A 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYD 369 (689)
T ss_dssp HHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------CCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred HHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC-----------------CCCCccCCcCccCHHHHhCCCCCC
Confidence 999999999999999999999999999999999865321 124569999999999997545799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATE 682 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~e 682 (1196)
.++|||||||+||||++ ||..... .++...+......+| ...++++++||++||+.||.+|++ +++
T Consensus 370 ~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p---~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC---ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 99999999999999996 8875432 223333333333333 356789999999999999999998 899
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
|++||||..+.|+.+
T Consensus 447 i~~HpfF~~idW~~l 461 (689)
T 3v5w_A 447 VKESPFFRSLDWQMV 461 (689)
T ss_dssp HTTSGGGTTCCHHHH
T ss_pred HhcCccccCCCHHHH
Confidence 999999999998865
No 28
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-46 Score=436.32 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=206.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||+||+|++..+ ++.||||+++.. ......+.+.+|+.+|++++| ||||+++++|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~- 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec-
Confidence 37899999999999999999998754 368999998743 334456789999999999965 8999999998432
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 516 (1196)
...+|||||||+ |+|.++|+.. ..+
T Consensus 141 --------------------------------------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l 182 (353)
T 4ase_A 141 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182 (353)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCB
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccC
Confidence 235799999997 5999999753 348
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++.++..++.|||+||+|||+++||||||||+|||++.++++||+|||+|+.+.... ........+|
T Consensus 183 ~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-------------~~~~~~~~~g 249 (353)
T 4ase_A 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 249 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------Cceeeccccc
Confidence 999999999999999999999999999999999999999999999999998653221 0112345689
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|||||++.+ ..|+.++|||||||+||||+| ||......+.....+. .+..++.+...++++.+||.+||+.
T Consensus 250 t~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-~g~~~~~p~~~~~~~~~li~~c~~~ 327 (353)
T 4ase_A 250 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHG 327 (353)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred cccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCc
Confidence 999999999998 579999999999999999986 8876554444444444 3333444456778999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.+|++|
T Consensus 328 dP~~RPt~~eil~~ 341 (353)
T 4ase_A 328 EPSQRPTFSELVEH 341 (353)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhHCcCHHHHHHH
Confidence 99999999999987
No 29
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.3e-46 Score=433.87 Aligned_cols=267 Identities=22% Similarity=0.327 Sum_probs=202.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+.+|+.+ +|||||+++++|.+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 367999999999999999999986 357899999986432 245688999999998 69999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..++|||||||+ |+|.+++. .+++.+++.++.||+.||+|
T Consensus 92 ------------------------------------~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~y 132 (361)
T 4f9c_A 92 ------------------------------------NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKR 132 (361)
T ss_dssp ------------------------------------TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHH
Confidence 467899999997 59999884 59999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCC-------CC------CCCccccCcCccccccC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFP-------TD------TGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~GT~~Y 600 (1196)
||++||+||||||+|||++.+ +++||+|||+|+.............. .. ........++.+||+.|
T Consensus 133 lH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 212 (361)
T 4f9c_A 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGF 212 (361)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGG
T ss_pred HHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccc
Confidence 999999999999999999877 79999999999865432111000000 00 00001123456899999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHH-HHhhh-----------------------------
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVL-SDLKQ----------------------------- 647 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~-~~l~~----------------------------- 647 (1196)
||||++.+.+.|+.++||||+||++|||++ ||....+....+ .+...
T Consensus 213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 292 (361)
T 4f9c_A 213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR 292 (361)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence 999999886679999999999999999997 885433221111 11000
Q ss_pred ----------------------cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 648 ----------------------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 648 ----------------------~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.......+...++++.+||++||..||.+|||++|+|+||||++++
T Consensus 293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 0001123455678999999999999999999999999999998763
No 30
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.8e-45 Score=452.54 Aligned_cols=258 Identities=23% Similarity=0.418 Sum_probs=222.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.++|||||+++++|.
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~------ 224 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFE------ 224 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE------
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345689999999999999999999999999999999997533 334567899999999999999999999883
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|||||||+ |+|.+++.. .+.+++.+++.++.||+.||+|
T Consensus 225 ----------------------------------~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~y 270 (573)
T 3uto_A 225 ----------------------------------DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270 (573)
T ss_dssp ----------------------------------CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3467899999996 599998864 4679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
||++||+||||||+|||++.+ +++||+|||+|+.+.... .....+||+.|||||++.+ ..|
T Consensus 271 lH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APEv~~~-~~y 333 (573)
T 3uto_A 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-KPV 333 (573)
T ss_dssp HHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------EEEEECSSGGGCCHHHHTT-CCB
T ss_pred HHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC----------------ceeeeEECccccCHHHhCC-CCC
Confidence 999999999999999999865 899999999998753221 1245689999999999998 569
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||+||||++ ||......+....+......+++ .+...++++++||++||+.||.+|||+.++|+|||
T Consensus 334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 999999999999999996 89887777776666555555443 45678899999999999999999999999999999
Q ss_pred CCCch
Q 000993 689 PPQME 693 (1196)
Q Consensus 689 ~~~~~ 693 (1196)
|....
T Consensus 414 ~~~~~ 418 (573)
T 3uto_A 414 LTPGN 418 (573)
T ss_dssp TSCCC
T ss_pred cCCCC
Confidence 98653
No 31
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=100.00 E-value=9e-46 Score=414.86 Aligned_cols=262 Identities=17% Similarity=0.207 Sum_probs=217.4
Q ss_pred HHHHHHHH--HHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHh--CCC-CceeEEEe
Q 000993 756 DYVVQVTK--EMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS--NQK-SSFKRYEI 830 (1196)
Q Consensus 756 ~~I~~~i~--~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~--~~~-~P~r~~Y~ 830 (1196)
+++++.++ ++|++|||++|.||+|........ + +|.|++|+.++||||+|+|+| ... +.. .|+|+||+
T Consensus 4 ~~le~~~r~~~~~~~~Gy~eI~tP~le~~~l~~~--d---~f~d~~g~~l~LRpd~T~~~a--~~~~~~~~~~p~R~~y~ 76 (275)
T 1usy_A 4 LDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAG--N---FFLDRKGNLFSIREDFTKTVL--NHRKRYSPDSQIKVWYA 76 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCCCSEEECSSCCS--S---CEEETTSCEEEECCCHHHHHH--HHHTTCTTCCCEEEECC
T ss_pred HhHHHHHHHHHHHHHCCCEEecCccccchhhhcc--c---ccCCCCCCEEEeCCcChHHHH--HHHhhcCCCCceEEEEe
Confidence 35667777 999999999999999955444221 2 568999999999999999999 222 225 79999999
Q ss_pred cCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHH
Q 000993 831 SSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVA 910 (1196)
Q Consensus 831 G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~ 910 (1196)
|+|||+|+++. |||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ ++|+|||+++++.+++. ++++++++++
T Consensus 77 g~vfR~e~~~~--Ref~Q~g~ei~g~~~~~~DaEvi~l~~~~l~~lgl~~-~~i~l~~~~~~~~~~~~--~~~~~~~~l~ 151 (275)
T 1usy_A 77 DFVYRYSGSDL--VAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKE--IPKDLHEKVL 151 (275)
T ss_dssp EEEEEEETTEE--EEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTT--SCGGGHHHHH
T ss_pred ceEEecCCCCC--CeeeEeCEEEecCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCHHHHHHHHHh--CCHHHHHHHH
Confidence 99999999988 8899999999999999999999999999999999985 99999999999999875 6777788899
Q ss_pred HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH--HH
Q 000993 911 ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YL 988 (1196)
Q Consensus 911 ~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l 988 (1196)
++++++++ . ++ ++.+..++++++.++.+..++ .+.|.+ ++++. +..++...+.|+++ ++
T Consensus 152 ~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~----l~~~~~~l~~l~~l~~~l 212 (275)
T 1usy_A 152 NLIDTKNL---------A---EI-EFLSHMKKIDLSRVEKIIEDS-IYRRSP-EHLKT----MDLPLSVREDLLSASSFL 212 (275)
T ss_dssp HHHHTTCH---------H---HH-HHHHHHTCCCCTHHHHHHHHH-HHCCSG-GGGGT----SCCCHHHHHHHHHHHHHH
T ss_pred HHHHccCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-HhhCCH-HHHHH----HhcCHHHHHHHHHHHHHH
Confidence 99988762 1 22 455667899988999999998 566664 44443 33455667777777 88
Q ss_pred H-HcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCccee
Q 000993 989 R-IWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067 (1196)
Q Consensus 989 ~-~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf 1067 (1196)
+ .+| ..++.||++++||++||||+|||+|..+.+ ++||+|||||+| ++|||||
T Consensus 213 ~~~~g-~~~~~~D~~lvRgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~l-----------------~~pavGf 266 (275)
T 1usy_A 213 QEKFP-TVSVEIDLTLARTIEEYCGLIFTIYDTSSS--------RLVAAGGEYTVN-----------------GEKGVGG 266 (275)
T ss_dssp HHHCS-SSEEEECCCCGGGGGTCSSEEEEEEETTTT--------EEEEEEEEEEET-----------------TEEEEEE
T ss_pred HHhcC-CCeEEEeccccCCCCccCCeEEEEEECCCC--------CeEeeecCCCCC-----------------CCCEEEE
Confidence 8 888 558999999999999999999999987433 489999999997 3599999
Q ss_pred cccHHHH
Q 000993 1068 SLALETI 1074 (1196)
Q Consensus 1068 aiglerl 1074 (1196)
|+|+||+
T Consensus 267 sig~er~ 273 (275)
T 1usy_A 267 SIFLEGK 273 (275)
T ss_dssp EEEEEEE
T ss_pred EEEeecc
Confidence 9999986
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-44 Score=409.17 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=187.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+..++|||||+++++|.+.+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~------- 70 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN------- 70 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-------
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-------
Confidence 4688999999999999999988 49999999986421 12222334666667889999999999986531
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~- 538 (1196)
.....+|||||||+ |+|.++++. .+++++.+.+++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~ 120 (303)
T 3hmm_A 71 -----------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp -----------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred -----------------------------CCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 699999975 4689999999999999999999987
Q ss_pred -------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-
Q 000993 539 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 610 (1196)
Q Consensus 539 -------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 610 (1196)
+|+||||||+||||+.++++||+|||+|+........ ........+||+.|||||++.+..
T Consensus 121 ~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~ymAPE~l~~~~~ 189 (303)
T 3hmm_A 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDSIN 189 (303)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ESCC-----CCGGGCCHHHHTTCSC
T ss_pred hhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------eeeecccccccccccCHHHhccccc
Confidence 8999999999999999999999999999865432110 011224568999999999997632
Q ss_pred ----CCCCcchhHHHHHHHHHhhc---CC----------chhH----HHHHHHHHhhhcCC---CCCcccc--CCHHHHH
Q 000993 611 ----KIDEKADMYSLGIVFFELWH---PF----------STAM----ERQIVLSDLKQKGE---LPPSWVA--KFSEQES 664 (1196)
Q Consensus 611 ----~~s~ksDVwSlGviLyELlt---Pf----------~~~~----~~~~~~~~l~~~~~---~p~~~~~--~~~~l~~ 664 (1196)
.|+.++|||||||+||||+| || .... ..+.....+..... +|..+.. .+..+.+
T Consensus 190 ~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~ 269 (303)
T 3hmm_A 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHH
Confidence 36779999999999999986 22 2111 11222222222222 2222221 2236789
Q ss_pred HHHHcccCCCCCCCCHHHHHhc
Q 000993 665 LLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+.+||+.||++|||+.+|++.
T Consensus 270 li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 270 IMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHcccCHhHCcCHHHHHHH
Confidence 9999999999999999999874
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.6e-43 Score=404.36 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=220.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|++..+|+.||||++..........+.+.+|+.+|+.++||||+++++++.
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-------- 84 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-------- 84 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 468999999999999999999999999999999999876656566778999999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 85 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~ 132 (328)
T 3fe3_A 85 --------------------------------TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132 (328)
T ss_dssp --------------------------------CSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456899999996 5999999988999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+++...... .....+||+.|+|||++.+...++.++|
T Consensus 133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D 196 (328)
T 3fe3_A 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG----------------KLDAFCGAPPYAAPELFQGKKYDGPEVD 196 (328)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------GGGTTSSSGGGCCHHHHHTCCCCSHHHH
T ss_pred CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------ccccccCCcceeCcccccCCCcCCchhh
Confidence 999999999999999999999999999997643211 1245689999999999998544568999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||++|||++ ||......+............|. ..++++.+||++||+.||.+|||++++++|+|+...
T Consensus 197 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 197 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 9999999999996 88877666665555554444443 356799999999999999999999999999999764
No 34
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2e-42 Score=390.85 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=212.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 72 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--------
Confidence 468999999999999999999999999999999998766655666789999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++++.+.+.. ...+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 120 (292)
T 3o0g_A 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 456899999999988877765 56799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 121 ~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 185 (292)
T 3o0g_A 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---------------ccccCCccccCCcChHHHcCCCCcCchHHH
Confidence 99999999999999999999999999997643211 112445789999999999875568999999
Q ss_pred HHHHHHHHHhhc---CC-chhHHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PF-STAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf-~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ || ................+..+ ......++++++||++
T Consensus 186 wslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (292)
T 3o0g_A 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHH
Confidence 999999999995 54 33333333222222111100 1112356788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||++++++||||...
T Consensus 266 ~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 266 LLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HhccChhhCCCHHHHhcCcccccC
Confidence 999999999999999999999875
No 35
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-42 Score=397.79 Aligned_cols=310 Identities=35% Similarity=0.672 Sum_probs=221.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++++++|++.+.||+|+||.||+|+++.+|+.||||+++... .....+.+.+|+.+|+.++|||||+++++|.+.....
T Consensus 2 s~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp CHHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred chhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 678899999999999999999999999999999999997544 3345678999999999999999999999997653210
Q ss_pred cC--CCCcCCCC-----cccccccc----------cccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC---
Q 000993 457 FD--GDSMWGSG-----TLASSTFS----------NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--- 515 (1196)
Q Consensus 457 ~~--~~~~~~~g-----~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--- 515 (1196)
+. .+..|... .+...... ........+..........++|+|||||++ +|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 00 00000000 00000000 000000000000111234568999999975 99999987543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
.++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............. ...........+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc---cccccccccccC
Confidence 56677899999999999999999999999999999999999999999999987643321111000 000012234568
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
||+.|+|||++.+ ..++.++|||||||++|||++|+.+............ ....|..+...++++.+||.+||+.||.
T Consensus 238 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 315 (332)
T 3qd2_B 238 GTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPT 315 (332)
T ss_dssp -CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGG
T ss_pred CCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCC
Confidence 9999999999988 5789999999999999999998887665554444433 4456666666778899999999999999
Q ss_pred CCCCHHHHHhccCCCCc
Q 000993 676 DRPSATELLQDALPPQM 692 (1196)
Q Consensus 676 ~RPta~eiL~~~~~~~~ 692 (1196)
+|||+.++++|+||+++
T Consensus 316 ~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 316 ERPEATDIIENAIFENL 332 (332)
T ss_dssp GSCCHHHHHHSTTCCCC
T ss_pred cCCCHHHHhhchhhhcC
Confidence 99999999999999864
No 36
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.3e-42 Score=400.04 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=220.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 5799999999999999999999999999999999975321 12234678899999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 123 (337)
T 1o6l_A 77 ---------------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+.++|
T Consensus 124 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 187 (337)
T 1o6l_A 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVD 187 (337)
T ss_dssp TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTHH
T ss_pred CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC---------------CcccccccChhhCChhhhcC-CCCCchhh
Confidence 999999999999999999999999999997532110 11345689999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||++|||++ ||...........+......+|. ..++++.+||++||+.||.+|| +++++++|+||
T Consensus 188 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred cccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 9999999999996 88776665555555544444443 4567999999999999999999 89999999999
Q ss_pred CCchHHHH
Q 000993 690 PQMEYELL 697 (1196)
Q Consensus 690 ~~~~~~~~ 697 (1196)
....+..+
T Consensus 265 ~~~~~~~~ 272 (337)
T 1o6l_A 265 LSINWQDV 272 (337)
T ss_dssp TTCCHHHH
T ss_pred CCCCHHHH
Confidence 99987644
No 37
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.4e-42 Score=400.63 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=222.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....+.|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|.
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-- 85 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-- 85 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE--
Confidence 345578999999999999999999999999999999998654321 13567899999999999999999999873
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
+...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 86 --------------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 86 --------------------------------------NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (361)
T ss_dssp --------------------------------------CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHH
T ss_pred --------------------------------------eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 2457899999995 6999999888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+|||++||+||||||+|||++.++ ++||+|||+++...... .....+||+.|+|||++.
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----------------ccccCCCCccEECchHHc
Confidence 9999999999999999999998877 79999999998643211 123467999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..|+.++|||||||++|+|++ ||......+....+......+++ .+...++.+++||++||..||.+|||+.++
T Consensus 192 ~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred C-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 7 568999999999999999996 88777666665555554444443 445678899999999999999999999999
Q ss_pred HhccCCCCchHH
Q 000993 684 LQDALPPQMEYE 695 (1196)
Q Consensus 684 L~~~~~~~~~~~ 695 (1196)
++|||+....+.
T Consensus 271 l~hp~~~~~~~~ 282 (361)
T 2yab_A 271 LRHPWITPVDTQ 282 (361)
T ss_dssp HTSTTTSCSSHH
T ss_pred hcCcCcCCCchh
Confidence 999999977543
No 38
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=404.58 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=217.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----- 94 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ----- 94 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-----
Confidence 346899999999999999999999999999999999975321 122345688999999988 7999999998873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 95 -----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 139 (353)
T 3txo_A 95 -----------------------------------TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139 (353)
T ss_dssp -----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999988999999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 140 LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 203 (353)
T 3txo_A 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---------------VTTATFCGTPDYIAPEILQE-MLYGP 203 (353)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------------------CCGGGCCHHHHHH-HHCTT
T ss_pred HHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC---------------ccccccCCCcCeEChhhcCC-CCcCC
Confidence 999999999999999999999999999999997432111 12345689999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH------HHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta------~eiL~ 685 (1196)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++ +++++
T Consensus 204 ~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999999996 88877777666666654444443 356789999999999999999998 99999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||....|..+
T Consensus 281 hp~f~~~~w~~l 292 (353)
T 3txo_A 281 HPFFKEIDWAQL 292 (353)
T ss_dssp SGGGTTCCHHHH
T ss_pred CCcccCCCHHHH
Confidence 999999988754
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.4e-42 Score=392.64 Aligned_cols=262 Identities=24% Similarity=0.438 Sum_probs=209.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|++++.||+|+||+||+|++. +|+.||||++............+.+|+.+++.++||||+++++++.
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------ 89 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH------ 89 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc------
Confidence 345689999999999999999999996 6999999999765554445678899999999999999999999873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+++|.+.+... ..+++..++.++.||+.||+||
T Consensus 90 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 135 (311)
T 3niz_A 90 ----------------------------------SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135 (311)
T ss_dssp ----------------------------------CSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999999888765 4599999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.+
T Consensus 136 H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 200 (311)
T 3niz_A 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---------------RSYTHEVVTLWYRAPDVLMGSKKYSTS 200 (311)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---------------C---CCCCCCTTCCHHHHTTCCSCCTH
T ss_pred HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc---------------ccccCCcccCCcCCHHHhcCCCCCCch
Confidence 99999999999999999999999999999998643211 112345789999999999875678999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCC--------------------------ccccCCHHHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPP--------------------------SWVAKFSEQESL 665 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~--------------------------~~~~~~~~l~~L 665 (1196)
+|||||||++|+|++ ||................+. .+. .....++++.+|
T Consensus 201 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 280 (311)
T 3niz_A 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL 280 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHH
Confidence 999999999999996 77654443332222221111 111 112345788999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
|++||+.||.+|||+.++++||||++...
T Consensus 281 i~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 281 LSNMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp HHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred HHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence 99999999999999999999999998653
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=400.61 Aligned_cols=256 Identities=30% Similarity=0.476 Sum_probs=209.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||+||+|++..+|+.||||++...... .....+.+|+.+|+.++||||+++++++.
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~------- 78 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLE------- 78 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEE-------
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------
Confidence 3468999999999999999999999999999999999765432 23456889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH 125 (347)
T 3zgw_A 79 ---------------------------------TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125 (347)
T ss_dssp ---------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2456899999995 699999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+|....... .......+||+.|+|||++.+...++.++
T Consensus 126 ~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 191 (347)
T 3zgw_A 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK--------------DYHLQTCCGSLAYAAPELIQGKSYLGSEA 191 (347)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------------------------CGGGCCHHHHTTC---CCHH
T ss_pred HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--------------CccccccCCccCccCHHHHcCCCCCCcHh
Confidence 9999999999999999999999999999987543211 11224568999999999999855468999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||||+||+|++ ||...........+.......|. ..++++.+||++||+.||.+|||+.++++|+|+.+
T Consensus 192 DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 192 DVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK---WLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 99999999999996 88877666666555554444443 35678999999999999999999999999999865
No 41
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-42 Score=393.92 Aligned_cols=257 Identities=27% Similarity=0.441 Sum_probs=220.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++++.||+|+||+||+|+++.+|+.||+|+++.... .....+.+.+|..+++.++||||++++++|.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~------- 76 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ------- 76 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-------
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-------
Confidence 35799999999999999999999999999999999975321 1123456889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 77 ---------------------------------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp ---------------------------------CSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999997 599999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+++.... .....+||+.|+|||++.+ ..++.++
T Consensus 124 ~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (318)
T 1fot_A 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------VTYTLCGTPDYIAPEVVST-KPYNKSI 184 (318)
T ss_dssp TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------------------CBCCCCSCTTTCCHHHHTT-CCBCTTH
T ss_pred HCCccccCCChheEEEcCCCCEEEeecCcceecCC------------------ccccccCCccccCHhHhcC-CCCCccc
Confidence 99999999999999999999999999999975421 1234589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~ 688 (1196)
|||||||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| +++++++|||
T Consensus 185 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999996 88776666665555554444443 3567999999999999999999 9999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....++.+
T Consensus 262 f~~~~~~~~ 270 (318)
T 1fot_A 262 FKEVVWEKL 270 (318)
T ss_dssp GSSCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887644
No 42
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.3e-42 Score=386.28 Aligned_cols=257 Identities=25% Similarity=0.456 Sum_probs=207.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|++ .+|+.||||++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--------
Confidence 36899999999999999999999 589999999997654433344678899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (288)
T 1ob3_A 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (288)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999998764 6799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 120 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (288)
T 1ob3_A 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (288)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---------------cccccccccccccCchheeCCCCCCcHHHH
Confidence 99999999999999999999999999998653211 112345789999999999875668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------C----CccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P----PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p----~~~~~~~~~l~~LI~~c 669 (1196)
|||||++|||++ ||................+.. + ......++++.+||++|
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 264 (288)
T 1ob3_A 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (288)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence 999999999996 787655544443332211110 0 01123567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|+.||.+|||+.++++|+||.+.
T Consensus 265 L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 265 LKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC-
T ss_pred cCCCcccCCCHHHHhcCcchhhc
Confidence 99999999999999999999763
No 43
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-41 Score=386.55 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=214.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------- 88 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV------- 88 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------
Confidence 347899999999999999999999999999999999765433 34678899999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++... .+++..++.++.||+.||+|||+
T Consensus 89 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 134 (297)
T 3fxz_A 89 ---------------------------------GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS 134 (297)
T ss_dssp ---------------------------------TTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 346799999995 5999988764 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|
T Consensus 135 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 198 (297)
T 3fxz_A 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVD 198 (297)
T ss_dssp TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHHC-SCBCTHHH
T ss_pred CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc---------------cccCCccCCcCccChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997643221 11234689999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|++..
T Consensus 199 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 9999999999997 88766655554444443333334445677899999999999999999999999999999764
No 44
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4e-42 Score=396.03 Aligned_cols=265 Identities=24% Similarity=0.421 Sum_probs=207.8
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+....+++|++++.||+|+||+||+|++..+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (329)
T 3gbz_A 28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--- 104 (329)
T ss_dssp ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE---
T ss_pred CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec---
Confidence 34556789999999999999999999999999999999997655544455678899999999999999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+++|.+++.....+++..++.++.||+.||+|
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~ 147 (329)
T 3gbz_A 105 -------------------------------------NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147 (329)
T ss_dssp -------------------------------------TTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999998899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEec-----CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 535 IHGQGIIHRDLTPNNIFFD-----ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld-----~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||++||+||||||+|||++ .++.+||+|||+++...... ......+||+.|+|||++.+.
T Consensus 148 LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~ 212 (329)
T 3gbz_A 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---------------RQFTHEIITLWYRPPEILLGS 212 (329)
T ss_dssp HHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------------------CCTTCCHHHHTTC
T ss_pred HHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc---------------cccCCCcCCccccCHHHhcCC
Confidence 9999999999999999995 44559999999998753221 112345789999999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-cc--------------------------ccCC
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SW--------------------------VAKF 659 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~--------------------------~~~~ 659 (1196)
..++.++|||||||++|||++ ||................+..+. .+ ...+
T Consensus 213 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T 3gbz_A 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD 292 (329)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence 668999999999999999996 78766555544443332111110 00 1145
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+++.+||++||+.||.+|||+.++|+||||.+..+
T Consensus 293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 78899999999999999999999999999998754
No 45
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.4e-42 Score=409.21 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=221.1
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..++.++|++.+.||+|+||.||+|.++.+|+.||+|++............+.+|+.+++.++|||||+++++|.
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 80 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS----- 80 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-----
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-----
Confidence 455678999999999999999999999999999999999876655556678999999999999999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||. |+|.+.+.....+++..++.++.||+.||+|
T Consensus 81 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 81 -----------------------------------EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp -----------------------------------CSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988999999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+|||++. ++.+||+|||+++...... ......+||+.|+|||++.+ ..
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~-~~ 189 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVLRK-DP 189 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---------------CBCCCSCSCGGGCCHHHHTT-CC
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---------------ceeecccCCcccCCHHHhcC-CC
Confidence 99999999999999999984 5789999999997643211 11234689999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 8999999999999999996 8877766666655555444443 45567889999999999999999999999999999
Q ss_pred CCCC
Q 000993 688 LPPQ 691 (1196)
Q Consensus 688 ~~~~ 691 (1196)
|+..
T Consensus 270 ~~~~ 273 (444)
T 3soa_A 270 WISH 273 (444)
T ss_dssp TTHH
T ss_pred cccC
Confidence 9864
No 46
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-41 Score=402.57 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=215.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+|+.+ +|||||+++++|.
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----- 123 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ----- 123 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----
Confidence 3468999999999999999999999999999999999864322 22334678899999887 8999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 124 -----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 168 (396)
T 4dc2_A 124 -----------------------------------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168 (396)
T ss_dssp -----------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 169 LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~gt~~Y~aPE~l~~-~~~~~ 232 (396)
T 4dc2_A 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGF 232 (396)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCBCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC---------------CccccccCCcccCCchhhcC-CCCCh
Confidence 999999999999999999999999999999997421110 12345689999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhH---------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH--
Q 000993 615 KADMYSLGIVFFELWH---PFSTAM---------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-- 680 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~---------~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-- 680 (1196)
++|||||||++|||++ ||.... .......+......+|. ..++++++||++||+.||.+||++
T Consensus 233 ~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~ 309 (396)
T 4dc2_A 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHP 309 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTSTTCST
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC---cCCHHHHHHHHHHhcCCHhHcCCCCC
Confidence 9999999999999996 885321 11122223333333343 456799999999999999999984
Q ss_pred ----HHHHhccCCCCchHHHHH
Q 000993 681 ----TELLQDALPPQMEYELLD 698 (1196)
Q Consensus 681 ----~eiL~~~~~~~~~~~~~~ 698 (1196)
+++++||||.++.|+.+.
T Consensus 310 ~~~~~ei~~Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 310 QTGFADIQGHPFFRNVDWDMME 331 (396)
T ss_dssp TTHHHHHHHSTTTTTCCHHHHH
T ss_pred CCCHHHHhcCccccCCCHHHHH
Confidence 899999999999887653
No 47
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-41 Score=410.19 Aligned_cols=281 Identities=27% Similarity=0.403 Sum_probs=203.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||+||+|+++.+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 125 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD----- 125 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----
Confidence 347899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||||++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 126 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (458)
T 3rp9_A 126 ------------------------------VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175 (458)
T ss_dssp ------------------------------TTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 01235689999999999999999888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC-C-----------CCCCCccccCcCccccccCCCchhc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-P-----------TDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
||+||||||+||||+.++++||+|||+|+............. . ..........+..+||+.|+|||++
T Consensus 176 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 255 (458)
T 3rp9_A 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI 255 (458)
T ss_dssp TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHH
T ss_pred CcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHh
Confidence 999999999999999999999999999987643221100000 0 0000011234567899999999987
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc--------------CCchhH--------------------HHHHHHHHhhhcC---
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH--------------PFSTAM--------------------ERQIVLSDLKQKG--- 649 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt--------------Pf~~~~--------------------~~~~~~~~l~~~~--- 649 (1196)
.....|+.++||||||||||||++ +|.+.. .......+....+
T Consensus 256 ~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~ 335 (458)
T 3rp9_A 256 LLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS 335 (458)
T ss_dssp TTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCC
T ss_pred hCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCC
Confidence 654679999999999999999985 222111 0111100000000
Q ss_pred -------------------------CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 650 -------------------------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 650 -------------------------~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.+...+...++++.+||++||..||.+|||++++|+||||.+..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp HHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 011123445789999999999999999999999999999998754
No 48
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-41 Score=397.01 Aligned_cols=258 Identities=25% Similarity=0.437 Sum_probs=220.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+.++|++.+.||+|+||.||+|.++.+|+.||||++..........+.+.+|+.+++.++||||++++++|.+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----- 99 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----- 99 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 345678999999999999999999999999999999998766666666789999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 100 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~l 144 (362)
T 2bdw_A 100 -----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144 (362)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999997 49999998888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+ ..|
T Consensus 145 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~ 207 (362)
T 2bdw_A 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPY 207 (362)
T ss_dssp HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------SCCCSCSCTTTCCHHHHTT-CCC
T ss_pred HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------ccccCCCCccccCHHHHcc-CCC
Confidence 999999999999999998654 59999999997643211 1234689999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++|+|+|
T Consensus 208 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 999999999999999997 8877666555555544444443 456678899999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
+..
T Consensus 288 ~~~ 290 (362)
T 2bdw_A 288 ICN 290 (362)
T ss_dssp HHT
T ss_pred cCC
Confidence 864
No 49
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-41 Score=400.71 Aligned_cols=276 Identities=24% Similarity=0.335 Sum_probs=207.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++++.||+|+||.||+|.++.+|+.||||++............+.+|+.+|+.+. ||||++++++|...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---- 81 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---- 81 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC----
Confidence 3468999999999999999999999999999999999765555666778899999999997 99999999987431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+++|.+++.. ..+++..++.++.||+.||+|||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 82 ----------------------------------NDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp ----------------------------------TSSCEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCEEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2346899999999999998876 57999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC-CC-----CCCCCccccCcCccccccCCCchhccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-FP-----TDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
++||+||||||+|||++.++.+||+|||+|+.+.......... .. ..........+..+||+.|+|||++.+..
T Consensus 127 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (388)
T 3oz6_A 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206 (388)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC
T ss_pred hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC
Confidence 9999999999999999999999999999998653211100000 00 00000112235568999999999998766
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------------
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------------- 653 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------------- 653 (1196)
.|+.++|||||||++|||++ ||...........+....+..+.
T Consensus 207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (388)
T 3oz6_A 207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286 (388)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH
T ss_pred CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc
Confidence 79999999999999999997 78766554444333221111000
Q ss_pred ----------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 654 ----------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 654 ----------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.....++++.+||++||+.||.+|||++++|+|||+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred chhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence 011456789999999999999999999999999999764
No 50
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-41 Score=396.21 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=220.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------- 111 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK------- 111 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------
Confidence 35899999999999999999999999999999999975321 1123467889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 112 ---------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 112 ---------------------------------DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp ---------------------------------CSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+++..... ....+||+.|+|||++.+ ..++.++
T Consensus 159 ~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~ 219 (350)
T 1rdq_E 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAV 219 (350)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHH
T ss_pred HCCcccccCccceEEECCCCCEEEcccccceeccCC------------------cccccCCccccCHHHhcC-CCCCCcC
Confidence 999999999999999999999999999999864211 234689999999999988 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ ++++++|+|
T Consensus 220 DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 99999999999996 88877666665555554444443 45679999999999999999998 999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....+..+
T Consensus 297 f~~~~w~~~ 305 (350)
T 1rdq_E 297 FATTDWIAI 305 (350)
T ss_dssp GTTCCHHHH
T ss_pred cCCCCHHHH
Confidence 999887654
No 51
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3e-41 Score=391.94 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=215.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||+++.... .......+.+|..+++.+ +||||++++++|..
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 35799999999999999999999999999999999986543 333456788999999988 89999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 82 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 126 (345)
T 3a8x_A 82 -----------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126 (345)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 127 H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 190 (345)
T 3a8x_A 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFS 190 (345)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTH
T ss_pred HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------CcccccCCCccccCccccCC-CCCChH
Confidence 99999999999999999999999999999997532110 11245689999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchh---------HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---
Q 000993 616 ADMYSLGIVFFELWH---PFSTA---------MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--- 680 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~---------~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta--- 680 (1196)
+|||||||++|||++ ||... ........+......+| ...++++++||++||+.||.+||++
T Consensus 191 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~ 267 (345)
T 3a8x_A 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQ 267 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCCTT
T ss_pred HhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhcCCHhHCCCCCCc
Confidence 999999999999996 77531 11122222222233333 3456799999999999999999995
Q ss_pred ---HHHHhccCCCCchHHHH
Q 000993 681 ---TELLQDALPPQMEYELL 697 (1196)
Q Consensus 681 ---~eiL~~~~~~~~~~~~~ 697 (1196)
.++++||||.+..|+.+
T Consensus 268 ~~~~~i~~hp~f~~~~w~~~ 287 (345)
T 3a8x_A 268 TGFADIQGHPFFRNVDWDMM 287 (345)
T ss_dssp THHHHHHTSGGGTTCCHHHH
T ss_pred CCHHHHhcCCccCCCCHHHH
Confidence 89999999999988755
No 52
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.9e-42 Score=397.30 Aligned_cols=261 Identities=28% Similarity=0.397 Sum_probs=219.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++.+ +||||++++++|.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~----- 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----- 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----
Confidence 346899999999999999999999999999999999975321 112345678899999877 9999999998873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 89 -----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (345)
T 1xjd_A 89 -----------------------------------TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133 (345)
T ss_dssp -----------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 134 LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 197 (345)
T 1xjd_A 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNH 197 (345)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC---------------CcccCCCCCcccCChhhhcC-CCCCC
Confidence 999999999999999999999999999999997532111 11345689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH-HHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~-eiL~~~~~~ 690 (1196)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++. ++++|+||.
T Consensus 198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc---ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcccc
Confidence 9999999999999996 88777666655555444433332 3567999999999999999999998 999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...|+.+
T Consensus 275 ~~~w~~l 281 (345)
T 1xjd_A 275 EINWEEL 281 (345)
T ss_dssp TCCHHHH
T ss_pred CCCHHHH
Confidence 9988754
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-41 Score=391.88 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=215.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++++|++.+.||+|+||+||+|+++.+++.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 76 (323)
T 3tki_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------ 76 (323)
T ss_dssp TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 3678999999999999999999999999999999999754322 234568899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+|||||++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 77 ----------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567999999975 99999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++.+...... ......+||+.|+|||++.+...++.++
T Consensus 123 ~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 189 (323)
T 3tki_A 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPV 189 (323)
T ss_dssp HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc-------------cccCCCccCcCccCcHHhccCCCCCCcc
Confidence 999999999999999999999999999999865322110 1123568999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||....................+.+...++.+.+||++||+.||.+|||+.++++|+||.+.
T Consensus 190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 99999999999996 88655443333333333444445567788899999999999999999999999999999764
No 54
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.9e-42 Score=382.76 Aligned_cols=261 Identities=25% Similarity=0.407 Sum_probs=197.6
Q ss_pred CCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeee
Q 000993 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFE 451 (1196)
Q Consensus 373 ~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e 451 (1196)
++..+..+++|++.+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (275)
T 2eue_A 5 SLADGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---CCCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred cCCCCCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence 34456677899999999999999999999999999999999975442 22335678899999999999999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+++||||++++|.+.+.....+++..++.++.||+.|
T Consensus 85 ----------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 124 (275)
T 2eue_A 85 ----------------------------------------KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ----------------------------------------SSCEEEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCeEEEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3457999999999999999888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+...
T Consensus 125 l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~ 188 (275)
T 2eue_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------------------------------CTTCCHHHHCC---
T ss_pred HHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc----------------cccCCCCCcCcCCceeeeCCCC
Confidence 999999999999999999999999999999999997643221 1234579999999999988544
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||++|||++ ||...................| ...++.+.+||++||+.||.+|||+.++++|+|
T Consensus 189 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~ 265 (275)
T 2eue_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp --THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHH
T ss_pred CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCe
Confidence 5789999999999999996 8877665555444443333333 345678999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
|+..
T Consensus 266 f~~~ 269 (275)
T 2eue_A 266 FKVD 269 (275)
T ss_dssp HHTT
T ss_pred eccc
Confidence 8753
No 55
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=397.58 Aligned_cols=262 Identities=25% Similarity=0.419 Sum_probs=216.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...+++|++++.||+|+||.||+|+++.+|+.||+|++..... .......+.+|+.+|+.++|||||+++++|..
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~---- 86 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD---- 86 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 3446899999999999999999999999999999999974321 12234678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||. |+|.+++.....+++..++.++.||+.||+|
T Consensus 87 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 130 (384)
T 4fr4_A 87 ------------------------------------EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130 (384)
T ss_dssp ------------------------------------SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~ 612 (1196)
||++||+||||||+|||++.++++||+|||+|+.+... ......+||+.|+|||++.+. ..|
T Consensus 131 LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----------------~~~~~~~gt~~Y~aPE~~~~~~~~~~ 194 (384)
T 4fr4_A 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----------------TQITTMAGTKPYMAPEMFSSRKGAGY 194 (384)
T ss_dssp HHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT----------------CCBCCCCSCGGGCCGGGTCCCSSCCB
T ss_pred HHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC----------------CceeccCCCccccCCeeeccCCCCCC
Confidence 99999999999999999999999999999999864321 112456899999999998742 348
Q ss_pred CCcchhHHHHHHHHHhhc---CCchh---HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-HHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-a~eiL~ 685 (1196)
+.++|||||||++|||++ ||... ................| ...++.+.+||++||+.||.+||+ ++++++
T Consensus 195 ~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 195 SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 999999999999999996 77532 22222222222222333 345679999999999999999998 999999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||..+.|+.+
T Consensus 272 hp~f~~~~w~~~ 283 (384)
T 4fr4_A 272 FPYMNDINWDAV 283 (384)
T ss_dssp SGGGTTCCHHHH
T ss_pred ChhhhcCCHHHH
Confidence 999999988755
No 56
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-41 Score=395.37 Aligned_cols=260 Identities=26% Similarity=0.381 Sum_probs=220.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 46899999999999999999999999999999999975321 112345688999999988 8999999998873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 92 ----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 92 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137 (353)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 138 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 201 (353)
T 2i0e_A 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 201 (353)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBSTH
T ss_pred HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC---------------cccccccCCccccChhhhcC-CCcCCc
Confidence 99999999999999999999999999999997532110 12345689999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+|| +++++++|+
T Consensus 202 ~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred ccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 999999999999996 88877766666665554444443 4567999999999999999999 479999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.|+.+
T Consensus 279 ~f~~~~w~~l 288 (353)
T 2i0e_A 279 FFRYIDWEKL 288 (353)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999988755
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=387.27 Aligned_cols=260 Identities=26% Similarity=0.392 Sum_probs=218.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..+.|++.+.||+|+||.||+|+++.+|+.||||++....... ...+.+.+|+.+|+.++||||++++++|..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 85 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--- 85 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 4467999999999999999999999999999999997654221 135678999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+
T Consensus 86 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~ 128 (326)
T 2y0a_A 86 -------------------------------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128 (326)
T ss_dssp -------------------------------------SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHH
Confidence 456899999996 599999988888999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+
T Consensus 129 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 191 (326)
T 2y0a_A 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY- 191 (326)
T ss_dssp HHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----------------CCCCCCSCTTTCCHHHHTT-
T ss_pred HHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----------------ccccccCCcCcCCceeecC-
Confidence 99999999999999999999887 79999999998653211 1234579999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++|+
T Consensus 192 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 568999999999999999996 88766555554444443333333 33566788999999999999999999999999
Q ss_pred ccCCCCchHH
Q 000993 686 DALPPQMEYE 695 (1196)
Q Consensus 686 ~~~~~~~~~~ 695 (1196)
||||......
T Consensus 272 hp~~~~~~~~ 281 (326)
T 2y0a_A 272 HPWIKPKDTQ 281 (326)
T ss_dssp STTTSCCSHH
T ss_pred CCCccCCcch
Confidence 9999886543
No 58
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.5e-41 Score=408.04 Aligned_cols=261 Identities=28% Similarity=0.390 Sum_probs=208.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||+||+|++..+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 134 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 134 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC-----
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC-----
Confidence 358999999999999999999999999999999999865445556778999999999999999999999884321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+|||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 135 -----------------------------~~~~~~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~ 183 (464)
T 3ttj_A 135 -----------------------------TLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183 (464)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0122457899999999988888754 499999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++++||+|||+|+..... ...+..+||+.|+|||++.+ ..|+.++||
T Consensus 184 ~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 246 (464)
T 3ttj_A 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 246 (464)
T ss_dssp TCCCCCCCGGGEEECTTSCEEECCCCCC-----C----------------CCC----CCCTTCCHHHHTT-CCCCTTHHH
T ss_pred CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----------------cccCCCcccccccCHHHHcC-CCCCHHHHH
Confidence 9999999999999999999999999999864321 12345689999999999998 579999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---------------------------ccc-----------
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---------------------------WVA----------- 657 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---------------------------~~~----------- 657 (1196)
|||||+||||++ ||.+.........++...+..++. +..
T Consensus 247 wSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (464)
T 3ttj_A 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326 (464)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccccc
Confidence 999999999996 887665544443333221111100 000
Q ss_pred -CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 658 -KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 658 -~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++++.+||++||..||.+|||++++|+||||...
T Consensus 327 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 03568999999999999999999999999999854
No 59
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=381.76 Aligned_cols=263 Identities=27% Similarity=0.389 Sum_probs=207.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRL---QHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~ 452 (1196)
..++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35789999999999999999999999999999999975432 111234566777777766 499999999988542
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC--CCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qIa~ 530 (1196)
. ......++++|||++++|.+++..... +++..++.++.||+.
T Consensus 87 ~-----------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 131 (308)
T 3g33_A 87 R-----------------------------------TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131 (308)
T ss_dssp C-----------------------------------SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHH
T ss_pred C-----------------------------------CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 1 012346899999999999999987654 999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||+|||++||+||||||+|||++.++.+||+|||+++..... ......+||+.|+|||++.+ .
T Consensus 132 al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~ 194 (308)
T 3g33_A 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----------------MALTPVVVTLWYRAPEVLLQ-S 194 (308)
T ss_dssp HHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTC----------------CCSGGGGCCCSSCCHHHHHT-S
T ss_pred HHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCC----------------cccCCccccccccCchHHcC-C
Confidence 999999999999999999999999999999999999764311 11244689999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC------------------------ccccCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------SWVAKFSEQE 663 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~~~~~~~~l~ 663 (1196)
.++.++|||||||++|||++ ||................+..+. .....++.+.
T Consensus 195 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (308)
T 3g33_A 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA 274 (308)
T ss_dssp CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHH
Confidence 68999999999999999997 88766655554443332211111 1124567889
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||.+||+.||.+|||+.++|+|+||.+..
T Consensus 275 ~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 275 QLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 999999999999999999999999998754
No 60
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.4e-41 Score=382.08 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=208.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 73 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------- 73 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--------
Confidence 578999999999999999999999999999999997665555556778899999999999999999998733
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 121 (311)
T 4agu_A 74 --------------------------------KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121 (311)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999986 6777777778899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 186 (311)
T 4agu_A 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------DYYDDEVATRWYRSPELLVGDTQYGPPVDV 186 (311)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------GGGCCHHHHHTCSCCCTHHHH
T ss_pred CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------cccCCCcCCccccChHHHhcCCCCCcchhh
Confidence 99999999999999999999999999997653221 112345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CCC---------ccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP---------SWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~---------~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||.................. .+. .+...++++.+||+
T Consensus 187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (311)
T 4agu_A 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLK 266 (311)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHH
Confidence 999999999996 77655444333222111111 110 11345678999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||++++++||||.+..
T Consensus 267 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 292 (311)
T 4agu_A 267 GCLHMDPTERLTCEQLLHHPYFENIR 292 (311)
T ss_dssp HHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHccCChhhcCCHHHHhcChHHHhcc
Confidence 99999999999999999999999875
No 61
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.5e-41 Score=387.26 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|+++.+|+.||||+++.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 73 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIH--------- 73 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEEC---------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEE---------
Confidence 3689999999999999999999999999999999975432 223457889999999999999999999873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 122 (317)
T 2pmi_A 74 -------------------------------TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122 (317)
T ss_dssp -------------------------------CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHH
Confidence 24568999999999999988654 35999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 187 (317)
T 2pmi_A 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---------------NTFSSEVVTLWYRAPDVLMGSRTYS 187 (317)
T ss_dssp HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC---------------CCCCCCCSCCTTCCHHHHTTCCCCC
T ss_pred HHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc---------------ccCCCCcccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999997643211 1123457899999999998755689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-------------------------------CccccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------------------PSWVAKF 659 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------------------~~~~~~~ 659 (1196)
.++|||||||++|||++ ||......+.........+..+ ......+
T Consensus 188 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (317)
T 2pmi_A 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD 267 (317)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC
Confidence 99999999999999996 7876555444333322111100 0011356
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+++.+||++||+.||.+|||+.++++||||.+...
T Consensus 268 ~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 268 GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 78999999999999999999999999999987543
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=389.50 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.++.+++.||+|++... ......+.+|+.+++.++||||++++++|.+
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 72 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------
Confidence 457999999999999999999999999999999998743 2345678899999999999999999998733
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+| +|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999974 9999997654 7999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+ ..++.
T Consensus 120 ~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 182 (321)
T 1tki_A 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------ccccccCChhhcCcHHhcC-CCCCc
Confidence 999999999999999987 7899999999998653211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|+|++ ||......+............+. .+...++++.+||++||..||.+|||+.++|+|||+.
T Consensus 183 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 9999999999999996 88777666665555544444433 4456788999999999999999999999999999987
Q ss_pred Cc
Q 000993 691 QM 692 (1196)
Q Consensus 691 ~~ 692 (1196)
+.
T Consensus 263 ~~ 264 (321)
T 1tki_A 263 QK 264 (321)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 63
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.4e-41 Score=394.63 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=213.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+ ++.++||||++++++|.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~---- 109 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ---- 109 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE----
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE----
Confidence 34568999999999999999999999999999999999765422 2234456777776 56789999999998873
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 110 ------------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~ 153 (373)
T 2r5t_A 110 ------------------------------------TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153 (373)
T ss_dssp ------------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 2457899999997 599999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+
T Consensus 154 ~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (373)
T 2r5t_A 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---------------STTSTFCGTPEYLAPEVLHK-QPYD 217 (373)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC---------------CCCCSBSCCCCCCCHHHHTT-CCCC
T ss_pred HHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC---------------CccccccCCccccCHHHhCC-CCCC
Confidence 9999999999999999999999999999999998532111 12345689999999999988 5699
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....++.....+++ ..++++++||++||+.||.+||++ .++++|
T Consensus 218 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS---SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 99999999999999996 88877666666655554444443 456799999999999999999986 799999
Q ss_pred cCCCCchHHHH
Q 000993 687 ALPPQMEYELL 697 (1196)
Q Consensus 687 ~~~~~~~~~~~ 697 (1196)
+||..+.|+.+
T Consensus 295 ~~f~~~~w~~l 305 (373)
T 2r5t_A 295 VFFSLINWDDL 305 (373)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999988754
No 64
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.7e-41 Score=405.97 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=220.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|+++++||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.++||||++++++|.
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 144 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-------- 144 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------
Confidence 3789999999999999999999999999999999974211 0111234788999999999999999999873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 145 --------------------------------~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 145 --------------------------------DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp --------------------------------CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999995 699999987 568999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----CCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 612 (1196)
++||+||||||+|||++.++++||+|||+|+...... ....+..+||+.|+|||++. +...|
T Consensus 193 ~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 258 (437)
T 4aw2_A 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEGGKGRY 258 (437)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECCSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--------------CcccccccCCcCeeChHHHhhcccCCCCC
Confidence 9999999999999999999999999999997643211 11234468999999999987 23568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||......+....++.. ...+|..+...++++++||++||+.+|.+ ||+++++++
T Consensus 259 ~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 999999999999999996 88877666665555432 34556666678899999999999998888 999999999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
||||..+.|+.+
T Consensus 339 Hpff~~i~w~~l 350 (437)
T 4aw2_A 339 HPFFSGIDWDNI 350 (437)
T ss_dssp SGGGTTCCTTTG
T ss_pred CCccCCCCHHHH
Confidence 999999988755
No 65
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.4e-41 Score=410.71 Aligned_cols=261 Identities=29% Similarity=0.509 Sum_probs=219.8
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
...+.+.++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|+.++|||||++++++.+
T Consensus 15 ~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 92 (486)
T 3mwu_A 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-- 92 (486)
T ss_dssp TTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred cccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--
Confidence 345667899999999999999999999999999999999997543333345678999999999999999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 93 --------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp --------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEec---CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|||++||+||||||+|||++ .++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 197 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG- 197 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------CCTTGGGGCCGGGGGS-
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------ccCCCcCCCCCCCHHHhCC-
Confidence 999999999999999999995 45679999999998653211 1234579999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.|+.++|||||||++|+|++ ||......+............ .+.|...++++++||++||+.||.+|||+.++|+
T Consensus 198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 48999999999999999996 887776666555554443333 3466778899999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|||+.+.
T Consensus 277 hp~~~~~ 283 (486)
T 3mwu_A 277 HPWIQKY 283 (486)
T ss_dssp CHHHHHT
T ss_pred CHhhccC
Confidence 9998643
No 66
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-41 Score=382.37 Aligned_cols=254 Identities=36% Similarity=0.555 Sum_probs=206.5
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
+...+.++|++.++||+|+||+||+|+++.+|+.||||++...............|+..+..+ +||||++++++|.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-- 128 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-- 128 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe--
Confidence 344556789999999999999999999999999999999876555555555666777666666 99999999998843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+++|.+++...+ .+++..++.++.||+.||
T Consensus 129 --------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL 170 (311)
T 3p1a_A 129 --------------------------------------GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170 (311)
T ss_dssp --------------------------------------TTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 45689999999999999887654 699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ .+
T Consensus 171 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~~ 232 (311)
T 3p1a_A 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----------------AGEVQEGDPRYMAPELLQG--SY 232 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----------------------CCCCCGGGCCGGGGGT--CC
T ss_pred HHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------CCcccCCCccccCHhHhcC--CC
Confidence 99999999999999999999999999999999987643211 1234579999999999986 58
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|||++ ||....... .+. ....++ .....++++.+||.+||+.||.+|||+.++++|||
T Consensus 233 ~~~~DiwslG~il~el~~g~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 233 GTAADVFSLGLTILEVACNMELPHGGEGWQ----QLR-QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp STHHHHHHHHHHHHHHHHTCCCCSSHHHHH----HHT-TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHh-ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence 999999999999999996 333332221 122 222332 33456789999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
+++
T Consensus 308 ~~~ 310 (311)
T 3p1a_A 308 LRQ 310 (311)
T ss_dssp GSC
T ss_pred ccC
Confidence 975
No 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-42 Score=398.29 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=209.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+++|.+.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~---- 80 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT---- 80 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3457899999999999999999999999999999999874321 11123568899999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||||++|+|.+++.....+++.+++.++.||+.||+||
T Consensus 81 ------------------------------------~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~L 124 (336)
T 3h4j_B 81 ------------------------------------PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124 (336)
T ss_dssp ------------------------------------SSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+...++.+
T Consensus 125 H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 188 (336)
T 3h4j_B 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVINGKLYAGPE 188 (336)
T ss_dssp HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB----------------TTCCCTTSTTTSCGGGSCCSGGGCHH
T ss_pred HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc----------------ccccccCCcCcCCHHHHcCCCCCCCc
Confidence 99999999999999999999999999999997643221 12345799999999999884444789
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|||||||++|+|++ ||.............. .........++++.+||++||+.||.+|||+.++++||||..
T Consensus 189 ~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS---CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp HHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS---SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred cchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 999999999999996 7765432221111111 111122345679999999999999999999999999999865
No 68
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-40 Score=373.43 Aligned_cols=259 Identities=25% Similarity=0.437 Sum_probs=220.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE------ 76 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc------
Confidence 45689999999999999999999999999999999998766666667789999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+|||||++ +|.+.+.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 122 (284)
T 3kk8_A 77 ----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122 (284)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567999999974 99999988889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
++||+||||||+||+++.++. +||+|||++....... ......||+.|+|||++.+ ..++
T Consensus 123 ~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 185 (284)
T 3kk8_A 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPYS 185 (284)
T ss_dssp HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------BCCCSCSCGGGCCHHHHTT-CCBC
T ss_pred HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------cccCCCCCcCCcCchhhcC-CCCC
Confidence 999999999999999987665 9999999997543211 1234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++||||||+++|+|++ ||...................+ +.+...++++.+||++||+.||.+|||+.++++|+|+
T Consensus 186 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred cccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 99999999999999996 8876666555544444333333 3445678899999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
.+..
T Consensus 266 ~~~~ 269 (284)
T 3kk8_A 266 CNRE 269 (284)
T ss_dssp HSCC
T ss_pred cCCh
Confidence 7643
No 69
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-41 Score=391.56 Aligned_cols=262 Identities=25% Similarity=0.400 Sum_probs=209.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~---- 98 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET---- 98 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS----
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc----
Confidence 3578999999999999999999999999999999987655555566789999999999999999999998743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|||||+++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 99 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~ 147 (367)
T 1cm8_A 99 ------------------------------LDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA 147 (367)
T ss_dssp ------------------------------TTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012245699999998899999876 6799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++||
T Consensus 148 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 209 (367)
T 1cm8_A 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDI 209 (367)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred CccccCcCHHHEEEcCCCCEEEEeeeccccccc------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhH
Confidence 999999999999999999999999999975321 12446899999999999875679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|||++ ||...........+....+.. ...+...++.+.+||+
T Consensus 210 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 289 (367)
T 1cm8_A 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE 289 (367)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999996 787655444333322211111 1122345778999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++|+||||....
T Consensus 290 ~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 290 KMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHccCChhHCCCHHHHhcChHHHhhc
Confidence 99999999999999999999998764
No 70
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.3e-41 Score=403.99 Aligned_cols=260 Identities=27% Similarity=0.385 Sum_probs=211.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++++.||+|+||.||+|+++.+|+.||||+++... ........+.+|+.+|+.++||||++++++|..
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 219 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------ 219 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE------
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee------
Confidence 3578999999999999999999999999999999997532 122334567899999999999999999998843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 220 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 ----------------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp ----------------------------------TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 499999998889999999999999999999999
Q ss_pred h-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
+ +||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 329 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRA 329 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------CCSSSCGGGCCHHHHHT-SCCCTH
T ss_pred hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC---------------cccccccCCccccCHhhcCC-CCCCCc
Confidence 8 999999999999999999999999999997532111 11245689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|||||||+||||++ ||...........+......+|. ..++++.+||.+||+.||.+|| +++++++|+
T Consensus 330 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred cchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 999999999999996 88776666555555544444443 3567999999999999999999 999999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.++.+
T Consensus 407 ~f~~~~~~~~ 416 (446)
T 4ejn_A 407 FFAGIVWQHV 416 (446)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999877643
No 71
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.8e-40 Score=397.15 Aligned_cols=284 Identities=24% Similarity=0.359 Sum_probs=213.2
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.....++|++.+.||+|+||.||+|+++.+|+.||||++...........++.+|+.+|+.++||||+++++++....
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-- 98 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD-- 98 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 344568999999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
......+|+|||||+++|.+++.....+++..++.++.||+.||+||
T Consensus 99 ---------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~L 145 (432)
T 3n9x_A 99 ---------------------------------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145 (432)
T ss_dssp ---------------------------------TTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 01235689999999999999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC-------CCCCCCCccccCcCccccccCCCchhccC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-------FPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|++||+||||||+|||++.++.+||+|||+|+............ ............+..+||+.|+|||++..
T Consensus 146 H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 225 (432)
T 3n9x_A 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225 (432)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence 99999999999999999999999999999998764322110000 00000000112356789999999999765
Q ss_pred CCCCCCcchhHHHHHHHHHhhc-------------CC-chhH-----------------HHHHHHHH-------------
Q 000993 609 WPKIDEKADMYSLGIVFFELWH-------------PF-STAM-----------------ERQIVLSD------------- 644 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt-------------Pf-~~~~-----------------~~~~~~~~------------- 644 (1196)
...|+.++|||||||++|||++ |+ .+.. .......+
T Consensus 226 ~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~ 305 (432)
T 3n9x_A 226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK 305 (432)
T ss_dssp CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHH
Confidence 5679999999999999999994 21 1110 00111000
Q ss_pred ----------hhhcC-CCCC----ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 645 ----------LKQKG-ELPP----SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 645 ----------l~~~~-~~p~----~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+.... ..+. .+...++++.+||++||+.||.+|||++++|+||||.+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 306 NINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred hccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 00000 0110 12456789999999999999999999999999999998643
No 72
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-40 Score=383.47 Aligned_cols=260 Identities=28% Similarity=0.419 Sum_probs=209.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
..++|++.+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 92 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-- 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--
Confidence 3578999999999999999999985 6899999999975432 12234567889999999999999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al 134 (327)
T 3a62_A 93 --------------------------------------GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134 (327)
T ss_dssp --------------------------------------SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 346799999997 59999999888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~ 198 (327)
T 3a62_A 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------TVTHTFCGTIEYMAPEILMR-SGH 198 (327)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------------------------CTTSSCCTTSCHHHHTT-SCC
T ss_pred HHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------ccccccCCCcCccCHhhCcC-CCC
Confidence 99999999999999999999999999999999997532111 01234579999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELL 684 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL 684 (1196)
+.++|||||||++|||++ ||..................+|+ ..++++.+||++||..||.+|| ++.+++
T Consensus 199 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l 275 (327)
T 3a62_A 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275 (327)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence 999999999999999996 88776666555555554444443 3567999999999999999999 899999
Q ss_pred hccCCCCchHHHH
Q 000993 685 QDALPPQMEYELL 697 (1196)
Q Consensus 685 ~~~~~~~~~~~~~ 697 (1196)
+||||....++.+
T Consensus 276 ~hp~f~~~~~~~~ 288 (327)
T 3a62_A 276 AHPFFRHINWEEL 288 (327)
T ss_dssp HSGGGSSCCHHHH
T ss_pred cCCcccCCCHHHH
Confidence 9999999877643
No 73
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.9e-41 Score=402.29 Aligned_cols=263 Identities=23% Similarity=0.371 Sum_probs=216.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++++.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.+++.++|||||+++++|.
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 139 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 139 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4789999999999999999999999999999999964211 0111234788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 140 --------------------------------~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~ 186 (410)
T 3v8s_A 140 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 186 (410)
T ss_dssp --------------------------------CSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599998865 469999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC---CCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK---IDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~s~ 614 (1196)
+||+||||||+|||++.++++||+|||+|+...... .....+.+||+.|+|||++.+... |+.
T Consensus 187 ~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~ 252 (410)
T 3v8s_A 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252 (410)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------EEECCSCCSCGGGCCHHHHHTTTTTCEEET
T ss_pred CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--------------cccccCCcCCccccCHHHhhccCCCcCCCC
Confidence 999999999999999999999999999997643221 112345689999999999987432 789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||+||||++ ||...........++..... ..+.+...++++++||++||+.+|.+ ||++++|++|+|
T Consensus 253 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 253 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 9999999999999996 88877666665555443211 22334467789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|.+..|...
T Consensus 333 f~~~~w~~~ 341 (410)
T 3v8s_A 333 FKNDQWAWE 341 (410)
T ss_dssp GCCSSCCST
T ss_pred ccCCCHHHH
Confidence 999876544
No 74
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.4e-41 Score=406.73 Aligned_cols=258 Identities=28% Similarity=0.516 Sum_probs=214.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+...+.|++++.||+|+||+||+|+++.++..||||++............+.+|+.+|+.++|||||+++++|.+
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 107 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED----- 107 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 344568999999999999999999999999999999998655444445678999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+||
T Consensus 108 -----------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 108 -----------------------------------KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+|||++.. +.+||+|||+|+...... .....+||+.|+|||++.+ .|
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~l~~--~~ 214 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----------------KMKERLGTAYYIAPEVLRK--KY 214 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------CBCCCCSCTTTCCHHHHTT--CB
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------cccccCCCcCeeCHHHHcc--cC
Confidence 99999999999999999764 459999999998653221 1234579999999999875 58
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||......+............+ +.|...++.+.+||++||+.||.+|||+.++|+|||
T Consensus 215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 999999999999999996 8887776666555555444433 456678899999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+.+.
T Consensus 295 ~~~~ 298 (494)
T 3lij_A 295 IKEM 298 (494)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8764
No 75
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-40 Score=387.03 Aligned_cols=271 Identities=22% Similarity=0.398 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--- 91 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP--- 91 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc---
Confidence 46899999999999999999999999999999999876655444456788999999999999999999988543100
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.......+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 92 -----------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 92 -----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp ----------------------------------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------cccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00124578999999999988887654 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+|+.+....... ........||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 211 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-----------PNRYTNRVVTLWYRPPELLLGERDYGPPID 211 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSS-----------CCCCCSSCSCGGGCCHHHHTTCCSCCTHHH
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhccccccccccc-----------ccccCCcccccCccCchhhcCCCCCCcHhH
Confidence 999999999999999999999999999998654221110 112345689999999999987566899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-ccc----------------------------CCHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVA----------------------------KFSEQESL 665 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~----------------------------~~~~l~~L 665 (1196)
||||||++|||++ ||................+..++. +.. .++.+.+|
T Consensus 212 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (351)
T 3mi9_A 212 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 291 (351)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHH
Confidence 9999999999997 777665544444333323332221 111 15678999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||+.||.+|||+.++|+|+||...
T Consensus 292 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 292 IDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred HHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 999999999999999999999999764
No 76
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-40 Score=389.15 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=201.5
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
.+.....++|++++.||+|+||+||+|+++.+|+.||||++...... ...+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 87 (361)
T 3uc3_A 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILT-- 87 (361)
T ss_dssp CCCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred ccCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEee--
Confidence 34445568999999999999999999999999999999999754332 3568899999999999999999998842
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++...+++++..++.++.||+.||
T Consensus 88 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 88 --------------------------------------PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC--eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+|||++||+||||||+|||++.++. +||+|||+++...... .....+||+.|+|||++.+..
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 193 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLLRQE 193 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------------------------CTTSCHHHHHCSS
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------CCCCCcCCCCcCChhhhcCCC
Confidence 9999999999999999999987765 9999999997432111 123457999999999998844
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
..+.++|||||||++|+|++ ||..... .............. +.....++++.+||++||+.||.+|||+.++
T Consensus 194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI-PDDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC-CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC-CCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 33455999999999999996 7865433 22222222222222 3334567899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+||.+
T Consensus 273 l~hp~f~~ 280 (361)
T 3uc3_A 273 KTHSWFLK 280 (361)
T ss_dssp HTSHHHHT
T ss_pred HhCcchhc
Confidence 99999854
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.5e-41 Score=391.18 Aligned_cols=258 Identities=25% Similarity=0.446 Sum_probs=210.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+.++|++.+.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 97 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--- 97 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE---
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 34578999999999999999999999999999999996432 111235678999999999999999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||+ ++|.+.+... ..+++..++.++.||+
T Consensus 98 -------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 98 -------------------------------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp -------------------------------------TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 456899999997 5898877543 3589999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---------------LVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---------------CBCCCCCSCGGGCCHHHH
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---------------eeecCCcCCcCccCHHHH
Confidence 9999999999999999999999987655 9999999998653211 112345899999999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
.+ ..|+.++|||||||++|+|++ ||..... .............+ ..+...++++.+||++||+.||.+|||+.+
T Consensus 206 ~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 283 (351)
T 3c0i_A 206 KR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283 (351)
T ss_dssp TT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 87 568999999999999999996 8876433 23333333233333 345567889999999999999999999999
Q ss_pred HHhccCCCCc
Q 000993 683 LLQDALPPQM 692 (1196)
Q Consensus 683 iL~~~~~~~~ 692 (1196)
+++|+|+...
T Consensus 284 ~l~hp~~~~~ 293 (351)
T 3c0i_A 284 ALNHPWLKER 293 (351)
T ss_dssp HHTSHHHHTH
T ss_pred HhcChhhcCC
Confidence 9999998754
No 78
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-40 Score=374.44 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=211.0
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++...++|.+.+.||+|+||.||+|+++.++..+|+|++..... ....+.+.+|+.+|+.++||||++++++|.+
T Consensus 16 ~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 91 (285)
T 3is5_A 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--- 91 (285)
T ss_dssp ESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred CCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheec---
Confidence 345667899999999999999999999999999999999975432 2345778999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||++ +|.+.+.. ...+++..++.++.||+
T Consensus 92 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 134 (285)
T 3is5_A 92 -------------------------------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134 (285)
T ss_dssp -------------------------------------SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence 4568999999974 99988854 36799999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
.||+|||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++
T Consensus 135 ~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----------------HSTNAAGTALYMAPEVF 198 (285)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------CTTGGGCCHHHH
T ss_pred HHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------cCcCcccccCcCChHHh
Confidence 99999999999999999999999 445789999999997643221 12345799999999998
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
.+ .++.++|||||||++|||++ ||...................+......++++.+||++||+.||.+|||+.++
T Consensus 199 ~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 199 KR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp TT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 75 58999999999999999996 88776655555444444444444445567899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+||++
T Consensus 277 l~hp~f~~ 284 (285)
T 3is5_A 277 LHHEWFKQ 284 (285)
T ss_dssp HTSGGGGC
T ss_pred hcCHHhhc
Confidence 99999975
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-40 Score=392.91 Aligned_cols=267 Identities=20% Similarity=0.288 Sum_probs=211.6
Q ss_pred cCCceEEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++++.||+| +||.||+|+++.+|+.||||+++...........+.+|+.+++.++|||||+++++|.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 4689999999999 99999999999999999999998766666667788899999999999999999998843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 98 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~ 143 (389)
T 3gni_B 98 ----------------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143 (389)
T ss_dssp ----------------------------------TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999999765 679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
||++||+||||||+|||++.++.+||+|||++............ ........+||+.|+|||++.+. ..|+
T Consensus 144 LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (389)
T 3gni_B 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV--------VHDFPKYSVKVLPWLSPEVLQQNLQGYD 215 (389)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC--------BCCCCTTCTTTGGGSCHHHHSTTSSCBC
T ss_pred HHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc--------cccccccccccccccCHHHHhccCCCCC
Confidence 99999999999999999999999999999998765322111100 00112345799999999999873 4589
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC----------------------------------------
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------------------- 650 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------------------- 650 (1196)
.++|||||||++|||++ ||............+.....
T Consensus 216 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (389)
T 3gni_B 216 AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295 (389)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------------------
T ss_pred cHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccC
Confidence 99999999999999996 77654333222221110000
Q ss_pred ---CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 651 ---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 651 ---~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
..+.+...++++.+||++||+.||.+|||+.++|+|+||.+...
T Consensus 296 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp ----------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred CCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00122345678999999999999999999999999999987754
No 80
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=400.00 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=215.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..++..++||||++++++|.
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 131 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-------- 131 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------
Confidence 4789999999999999999999999999999999974221 1112235788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+..++|+|||||+ |+|.+++.+. ..+++..++.++.||+.||+|||
T Consensus 132 --------------------------------~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 132 --------------------------------DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999995 6999999875 47999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC------CC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~ 610 (1196)
++||+||||||+|||++.++++||+|||+|+...... .......+||+.|+|||++.+ ..
T Consensus 180 ~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~ 245 (412)
T 2vd5_A 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--------------TVRSLVAVGTPDYLSPEILQAVGGGPGTG 245 (412)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECSSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred HCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--------------ccccceeccccCcCCHHHHhhcccCcCCC
Confidence 9999999999999999999999999999998653211 111234689999999999873 24
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCCC---CCHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDR---PSATE 682 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R---Pta~e 682 (1196)
.|+.++|||||||++|||++ ||......+....+... ...+|......++++++||++||+ +|.+| |++++
T Consensus 246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e 324 (412)
T 2vd5_A 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD 324 (412)
T ss_dssp EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred CCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 58999999999999999996 88877666655554432 233444445678899999999999 99998 59999
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
+++|+||..+.|+.+
T Consensus 325 i~~Hpff~~i~w~~l 339 (412)
T 2vd5_A 325 FRTHPFFFGLDWDGL 339 (412)
T ss_dssp HHTSGGGTTCCSTTS
T ss_pred HhcCCCcCCCCHHHH
Confidence 999999999988754
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8e-41 Score=378.88 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=203.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc------------------------hhHHHHHHHHHHH
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL------------------------PVNDRILREVATL 434 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~------------------------~~~~~~~~Ev~iL 434 (1196)
.+++|++.+.||+|+||.||+|++..+|+.||||++....... ...+.+.+|+.+|
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999997543211 1235688999999
Q ss_pred HhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc
Q 000993 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY 513 (1196)
Q Consensus 435 ~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~ 513 (1196)
+.++||||+++++++.+. ....+|+|||||++ +|.+++ ..
T Consensus 91 ~~l~h~~iv~~~~~~~~~--------------------------------------~~~~~~lv~e~~~~~~l~~~~-~~ 131 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDP--------------------------------------NEDHLYMVFELVNQGPVMEVP-TL 131 (298)
T ss_dssp HTCCCTTBCCEEEEEECS--------------------------------------SSSEEEEEEECCTTCBSCCSS-CS
T ss_pred HhCCCCCCCeEEEEEEcC--------------------------------------CCCEEEEEEecCCCCcHHHHh-hc
Confidence 999999999999987431 24578999999974 776654 34
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcC
Q 000993 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593 (1196)
Q Consensus 514 ~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1196)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....
T Consensus 132 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~ 196 (298)
T 2zv2_A 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---------------ALLSN 196 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---------------CEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc---------------ccccC
Confidence 579999999999999999999999999999999999999999999999999997643211 01234
Q ss_pred ccccccCCCchhccCCCC--CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 000993 594 QVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 594 ~~GT~~Y~APE~l~~~~~--~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~ 668 (1196)
..||+.|+|||++.+... ++.++|||||||++|||++ ||.................. .+.....++++.+||.+
T Consensus 197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~ 275 (298)
T 2zv2_A 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE-FPDQPDIAEDLKDLITR 275 (298)
T ss_dssp CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCSSSCCCHHHHHHHHH
T ss_pred CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCC-CCCccccCHHHHHHHHH
Confidence 579999999999987432 4788999999999999996 88765544433333322222 23344567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCC
Q 000993 669 LMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
||+.||.+|||+.++++||||.
T Consensus 276 ~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 276 MLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HTCSCTTTSCCHHHHTTCHHHH
T ss_pred HhhcChhhCCCHHHHhcCcccc
Confidence 9999999999999999999874
No 82
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.5e-40 Score=403.48 Aligned_cols=259 Identities=27% Similarity=0.508 Sum_probs=215.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----------hhHHHHHHHHHHHHhcCCCCeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----------PVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----------~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
.+...++|.++++||+|+||+||+|+++.+++.||||++....... ...+.+.+|+.+|+.++|||||+
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 3455689999999999999999999999999999999997543221 23567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 523 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 523 (1196)
++++|. +...+|+|||||+ ++|.+.+.....+++..++.
T Consensus 111 ~~~~~~----------------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~ 150 (504)
T 3q5i_A 111 LFDVFE----------------------------------------DKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150 (504)
T ss_dssp EEEEEE----------------------------------------CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHH
T ss_pred EEEEEE----------------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence 999873 2457899999996 59999998888999999999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|
T Consensus 151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y 214 (504)
T 3q5i_A 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----------------KLRDRLGTAYY 214 (504)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------CBCCCCSCTTT
T ss_pred HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------ccccccCCcCC
Confidence 999999999999999999999999999998876 69999999998653211 12345799999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+|||++.+ .|+.++|||||||++|+|++ ||......+............+ +.|...++++++||++||+.||.+
T Consensus 215 ~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~ 292 (504)
T 3q5i_A 215 IAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292 (504)
T ss_dssp CCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred CCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhH
Confidence 99999875 58999999999999999996 8887766666555544333333 345677889999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|||+.++|+|||+...
T Consensus 293 R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 293 RCTAEEALNSRWIKKY 308 (504)
T ss_dssp SCCHHHHHTSHHHHHT
T ss_pred CCCHHHHhcCHhhhhc
Confidence 9999999999998543
No 83
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.8e-40 Score=372.69 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=209.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||+|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 73 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------- 73 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec--------
Confidence 578999999999999999999999999999999987554433344678899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (299)
T 2r3i_A 74 --------------------------------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121 (299)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999765 469999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+...++.++|
T Consensus 122 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 186 (299)
T 2r3i_A 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGAKYYSTAVD 186 (299)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------BCTTSCBCCCTTCCHHHHTTCSSCCTHHH
T ss_pred CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc---------------cccCcccccccccCcHHhhccccCChHHH
Confidence 999999999999999999999999999998653221 11234578999999999987555899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC--------------------------ccccCCHHHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP--------------------------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~--------------------------~~~~~~~~l~~LI~~ 668 (1196)
||||||++|+|++ ||................+..+. .....++++.+||++
T Consensus 187 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 266 (299)
T 2r3i_A 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQ 266 (299)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHH
Confidence 9999999999997 88766555444433332111100 012356788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++++|+||....
T Consensus 267 ~L~~dP~~Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 267 MLHYDPNKRISAKAALAHPFFQDVT 291 (299)
T ss_dssp HTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred hcCcCcccCCCHHHHhcChhhhcCC
Confidence 9999999999999999999998653
No 84
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.4e-40 Score=369.71 Aligned_cols=256 Identities=24% Similarity=0.374 Sum_probs=214.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|.+.+.||+|+||.||+|.+..++..||+|++............+.+|+.+++.++||||++++++|....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 98 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------- 98 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-------
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-------
Confidence 4588999999999999999999999999999999876666666778999999999999999999999874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++|
T Consensus 99 -----------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 99 -----------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp -----------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred -----------------------------CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 12467899999996 599999998889999999999999999999999999
Q ss_pred --CcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 540 --IIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 540 --IiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
|+||||||+|||++ .++.+||+|||++...... ......||+.|+|||++.+ .++.++
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~--~~~~~~ 210 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESV 210 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHH
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-----------------ccccccCCcCcCCHHHHhc--cCCCcc
Confidence 99999999999998 7899999999999753211 1233579999999999876 489999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+||++
T Consensus 211 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 211 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred hHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 99999999999996 8876555444444444332322333445678999999999999999999999999999975
No 85
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=385.37 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=203.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+++.||+|+||+||+|+++.+++.||||+++..... .....+.+|+.+|+.++||||+++++++..
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 71 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--------
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEee--------
Confidence 46899999999999999999999999999999998643321 111245579999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 119 (324)
T 3mtl_A 72 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119 (324)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34579999999999999887654 599999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 120 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (324)
T 3mtl_A 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184 (324)
T ss_dssp TEEESSCCGGGEEECTTCCEEECSSSEEECC---------------------------CGGGCCHHHHTTCCCCCTHHHH
T ss_pred CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---------------cccccccCcccccChhhhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 112345789999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-C--------------------------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-P--------------------------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~--------------------------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|+|++ ||......+.........+..+ . .....++++.+||++
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 264 (324)
T 3mtl_A 185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTK 264 (324)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHH
Confidence 999999999996 8876655544433332211111 0 112346788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||++++|+||||....
T Consensus 265 ~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 265 LLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred HcCcCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998754
No 86
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.2e-41 Score=406.04 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=220.0
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+.++|++.+.||+|+||.||+|+++.+|+.||||++...... ......+.+|+.+++.++|||||+++++|.+
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 97 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED---- 97 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 34567899999999999999999999999999999999765432 3346789999999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||+|
T Consensus 98 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 98 ------------------------------------KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ .
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 203 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----------------KMKDKIGTAYYIAPEVLHG--T 203 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------SHHHHTTGGGTCCHHHHHT--C
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------ccccCCCCccccCceeecC--C
Confidence 999999999999999999 467899999999998653221 1234579999999999987 5
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||++|+|++ ||......+............+ +.|...++++++||++||+.||.+|||+.++|+||
T Consensus 204 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 8999999999999999996 8887776666555554443333 45677889999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
|+...
T Consensus 284 ~~~~~ 288 (484)
T 3nyv_A 284 WIQTY 288 (484)
T ss_dssp HHHHH
T ss_pred hhccc
Confidence 98654
No 87
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4e-40 Score=368.88 Aligned_cols=254 Identities=31% Similarity=0.483 Sum_probs=207.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.+++.++|++.+.||+|+||.||+|+++.+++.||||+++...........+.+|+..+..+ +||||++++++|.+
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--- 82 (289)
T 1x8b_A 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--- 82 (289)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE---
T ss_pred cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec---
Confidence 35667899999999999999999999999999999999987655555677899999999999 99999999998743
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+
T Consensus 83 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 125 (289)
T 1x8b_A 83 -------------------------------------DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125 (289)
T ss_dssp -------------------------------------TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence 3568999999965 999999765 6799999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC-------------------CCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR-------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~-------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
.||+|||++||+||||||+|||++.+ ..+||+|||+++.....
T Consensus 126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------ 187 (289)
T 1x8b_A 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------------------ 187 (289)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS------------------
T ss_pred HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------------------
Confidence 99999999999999999999999844 47999999999764311
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc--CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~ 668 (1196)
....||+.|+|||++.+...++.++|||||||++|+|++ |+...... ... +. ....+......++++.+||++
T Consensus 188 -~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~~~~~~~~li~~ 262 (289)
T 1x8b_A 188 -QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WHE-IR-QGRLPRIPQVLSQEFTELLKV 262 (289)
T ss_dssp -CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHH-HH-TTCCCCCSSCCCHHHHHHHHH
T ss_pred -cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--HHH-HH-cCCCCCCCcccCHHHHHHHHH
Confidence 234699999999999875567789999999999999997 33222211 111 11 233344444567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+|+...
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC---
T ss_pred HhCCCcccCCCHHHHhhChHhhhh
Confidence 999999999999999999999864
No 88
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.5e-40 Score=376.46 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=219.0
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....++|++.+.||+|+||.||+|+++.+|+.||||++....... .....+.+|+.+++.++||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN- 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 344578999999999999999999999999999999997654321 135678999999999999999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (321)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 356899999996 5999999988889999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----------------cccccCCCCCccCccccc
Confidence 9999999999999999999999887 79999999997643211 123457999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++
T Consensus 192 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred C-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 7 568999999999999999996 88766655554444433333333 234567789999999999999999999999
Q ss_pred HhccCCCCchHH
Q 000993 684 LQDALPPQMEYE 695 (1196)
Q Consensus 684 L~~~~~~~~~~~ 695 (1196)
++|||+......
T Consensus 271 l~hp~~~~~~~~ 282 (321)
T 2a2a_A 271 LRHPWITPVDNQ 282 (321)
T ss_dssp HHSTTTSCSSHH
T ss_pred hcCccccCCCcc
Confidence 999999987654
No 89
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=382.87 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=199.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|+++.+++.||||+++... ..+.+.+|+.+|+.++||||++++++|..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 119 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFET------ 119 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC------
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEec------
Confidence 34577999999999999999999999999999999997432 23567889999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 120 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 120 ----------------------------------PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..++
T Consensus 166 ~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~ 228 (349)
T 2w4o_A 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----------------LMKTVCGTPGYCAPEILRG-CAYG 228 (349)
T ss_dssp HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------------------CGGGSCHHHHTT-CCCC
T ss_pred HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----------------ccccccCCCCccCHHHhcC-CCCC
Confidence 999999999999999976 7899999999998643211 1234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||............+. ..... ++.+...++++.+||++||+.||.+|||+.++++|+|
T Consensus 229 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 99999999999999996 7866554443333332 22222 2344567889999999999999999999999999999
Q ss_pred CCCch
Q 000993 689 PPQME 693 (1196)
Q Consensus 689 ~~~~~ 693 (1196)
+.+..
T Consensus 309 ~~~~~ 313 (349)
T 2w4o_A 309 VTGKA 313 (349)
T ss_dssp TTSTT
T ss_pred cCCCc
Confidence 98653
No 90
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=100.00 E-value=2.2e-40 Score=409.27 Aligned_cols=415 Identities=12% Similarity=0.054 Sum_probs=284.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
+.+.|++||+|.++.+++.|++.+++.|+++||++|.||+| ++. ++.+.+.++||+|.|++|+.++|||+.|++
T Consensus 34 ~~~~G~~~~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~~d~~~~~~~LrP~~~~~ 113 (572)
T 2j3l_A 34 QVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEET 113 (572)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEEECTTCCEEEECSCCHHH
T ss_pred ccCCCeeeeCCHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEEecCCCCeEEEccccHHH
Confidence 35799999999999999999999999999999999999999 222 223567899999999999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeeecCCC-CC---CCcceeEeEEEEeCCCCccchHHH---HHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~---~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L~~lgi~~~ 881 (1196)
++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||.+...+|+|+ +.++.++|+.||+.
T Consensus 114 ~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~~~~~~~e~~~~~~~~~~~~~~lgl~-- 191 (572)
T 2j3l_A 114 FTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE-- 191 (572)
T ss_dssp HHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 99988874 2469999999999999987 34 556799999999999888899986 45899999999995
Q ss_pred eEEEeCcHHHHHHHHH------------------HcCCCHH-----------------------------HHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIWS------------------WAGIKAE-----------------------------HREKVAELLA 914 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~------------------~lgl~~~-----------------------------~~~~l~~~l~ 914 (1196)
+.+.+|+++.+.+.+. .++.... ....+...+.
T Consensus 192 ~~~~~~~~g~~g~~~s~E~~~~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~l~~~lg 271 (572)
T 2j3l_A 192 FRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFE 271 (572)
T ss_dssp EEEEECCGGGGTCSSEEEEEEECTTCSEEEEEESSSSCEEETTTCCCCCCCCCCCCCCCCCEEEECTTCCSHHHHHHHHT
T ss_pred EEEEecccccCCCcccEEEEEEcCCCcceEEEeCCCCcccchhhhhcccccccccccccccceecCCCCCcHHHHHHHhC
Confidence 9999999776654320 1111000 0111111111
Q ss_pred H-hcCCCCCcccccccHHHHHHHHH-HhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH------
Q 000993 915 M-MGSLRPQSSEWKSKWVVIRRQLL-QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL------ 986 (1196)
Q Consensus 915 ~-~d~~~~~~~~~k~~~~~~~~~~~-~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L------ 986 (1196)
. .+.+.+... .+ ..+....-++ ....+.. .++..++. .. .+.... .+.+.++
T Consensus 272 ~~~~~i~K~l~-~~-~~~~~~~vli~gd~el~~---~kl~~~l~---~~---------~l~~a~---~~el~~~~g~~~g 331 (572)
T 2j3l_A 272 VEPQRIIKSVL-FI-ADEEPVMVLVRGDHDVND---VKLKNFLG---AD---------FLDEAT---EEDARRVLGAGFG 331 (572)
T ss_dssp CCGGGBEEEEE-EE-ETTEEEEEEEETTCCBCH---HHHHHHHT---CS---------CEEECC---HHHHHHHHSSCTT
T ss_pred cCHHHeEEEEE-EE-eCCcEEEEEeeCccccCH---HHHHHhhC---CC---------ccccCC---HHHHHHhhCCCcc
Confidence 0 000000000 00 0000000000 0000110 11111110 00 000000 0111111
Q ss_pred HHHHcCC--CceEEEcCCCCC--------------------CCCCccceEEEEEecCCCCccccccccccccccccc---
Q 000993 987 YLRIWRI--EKNIYIDALMPP--------------------IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD--- 1041 (1196)
Q Consensus 987 ~l~~~g~--~~~i~~Dl~lvr--------------------gl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD--- 1041 (1196)
++..+|+ .-.+.+|.+++| |++||++++|++.....+ ...++|+ ||||
T Consensus 332 ~~~p~gl~~~i~~~iD~sl~r~~~~~~ga~~~~~~~~~~~~grd~~~~~~~el~~~~~G------~~~~~~g-g~~~~~~ 404 (572)
T 2j3l_A 332 SIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEG------DPSPDGN-GVLAFTK 404 (572)
T ss_dssp SCCSTTCCTTCEEEEETTTTTCCSEEEECSSTTEEEEEECBTTTBCCSEEECCBCCCTT------CBCTTSS-SBEEEEE
T ss_pred ccCCccCCCCCcEEEehhhhcCCceEEccCCCCceeeccccccCcCcCcHHHHHHHhcC------CcccccC-Ccceecc
Confidence 1111222 236899999999 789999999998754332 2345664 8887
Q ss_pred --------hhh----hhccccccccccCCCCCCCcc-eecccHHHHHhhccCC------CCCCCCCCCceEEEEEcCC--
Q 000993 1042 --------YLL----HRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPVD------FKPVRNEAGTSVLVCSRGG-- 1100 (1196)
Q Consensus 1042 --------~L~----~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~~------~~~~~~~~~~~vlv~~~~~-- 1100 (1196)
+|- ++|+.. ....+++..+|++ ||+||+|||+.+|.+. ...+...++.+|+|++.+.
T Consensus 405 ~ievg~~f~Lg~~ys~~~~~~--~~~~~g~~~~p~~g~~giGveRli~~l~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~ 482 (572)
T 2j3l_A 405 GIEIGHIFKLGTRYSDAMGAT--VLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKD 482 (572)
T ss_dssp EEEEEEEEEEETHHHHHHTCE--EECTTSCEEECEEEEEEEEHHHHHHHHHHHHEETTEECCCTTTSSCSEEEEESCTTC
T ss_pred ceEEEEEeccCcccccccCCE--EECCCCcEEeeeeeccccCHHHHHHHHHHhcCcccCcccCCCcCCeEEEEEecCCCC
Confidence 442 444321 1111333347888 8999999999886522 2222234678999999841
Q ss_pred CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHH
Q 000993 1101 GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRF 1180 (1196)
Q Consensus 1101 ~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~ 1180 (1196)
+....+|.+++++||+.|++|++++. ++++++++++|++.|+|++|++|++| ++|+|+||+|.+++|..++++++++.
T Consensus 483 ~~~~~~a~~l~~~Lr~~gi~v~~d~~-~~~~g~k~~~a~~~g~p~~iivG~~e-~~~~v~vk~~~~~~q~~v~~~~l~~~ 560 (572)
T 2j3l_A 483 EYQTKLSQEVEAMMTEAGYEVLVDDR-NERAGVKFADADLIGCPIRITVGKKA-VDGVVEVKIKRTGEMLEVRKEELEST 560 (572)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHCCSEEEEECGGG-GGTEEEEEETTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeCC-CCCHhHHHHHHHhcCCCEEEEEcccc-cCCeEEEEEcCCCcEEEEeHHHHHHH
Confidence 34678899999999999999998876 57999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHh
Q 000993 1181 LLDAIAS 1187 (1196)
Q Consensus 1181 l~~~l~~ 1187 (1196)
|+ .++.
T Consensus 561 l~-~~~~ 566 (572)
T 2j3l_A 561 LS-ILMN 566 (572)
T ss_dssp HH-HHCC
T ss_pred HH-HHhc
Confidence 98 7653
No 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-40 Score=387.11 Aligned_cols=258 Identities=22% Similarity=0.373 Sum_probs=215.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+...++|++.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 119 (387)
T 1kob_A 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED---- 119 (387)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC----
T ss_pred CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe----
Confidence 3455689999999999999999999999999999999987432 2344578899999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 120 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~ 163 (387)
T 1kob_A 120 ------------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 163 (387)
T ss_dssp ------------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 456899999996 59999987654 6999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 164 ~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 226 (387)
T 1kob_A 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EP 226 (387)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CC
T ss_pred HHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc----------------ceeeeccCCCccCchhccC-CC
Confidence 999999999999999999974 4679999999998653211 1123479999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++|||||||++|||++ ||......+............+ ..+...++++.+||++||+.||.+|||+.++++|+
T Consensus 227 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 8999999999999999996 8877665555444444333333 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
|+.+.
T Consensus 307 ~~~~~ 311 (387)
T 1kob_A 307 WLKGD 311 (387)
T ss_dssp TTSSC
T ss_pred cccCC
Confidence 99864
No 92
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.4e-40 Score=382.96 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=205.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----CCCeeeeeeeeeec
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----HQHVVRYYQAWFET 452 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----HpnIV~l~~~~~e~ 452 (1196)
...++|+++++||+|+||+||+|++..+++.||||+++. .......+.+|+.+++.++ ||||++++++|..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~- 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY- 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-
Confidence 345799999999999999999999999999999999863 3344567788999999996 9999999998843
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
...+|+|||||+++|.+++.... .+++..++.++.||+.
T Consensus 108 ---------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 148 (360)
T 3llt_A 108 ---------------------------------------YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148 (360)
T ss_dssp ---------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 35689999999889999997654 5999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecC-------------------------CCCeEEeccCcchhccccccccCCCCCCCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDA-------------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~-------------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~ 585 (1196)
||+|||++||+||||||+|||++. ++.+||+|||+|+....
T Consensus 149 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-------------- 214 (360)
T 3llt_A 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-------------- 214 (360)
T ss_dssp HHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--------------
T ss_pred HHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--------------
Confidence 999999999999999999999975 78899999999975321
Q ss_pred CccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-------
Q 000993 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------- 655 (1196)
Q Consensus 586 ~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............|..+
T Consensus 215 ----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 289 (360)
T 3llt_A 215 ----YHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKT 289 (360)
T ss_dssp ----CCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTS
T ss_pred ----CCcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhc
Confidence 1234579999999999998 569999999999999999996 8876554443333222222222110
Q ss_pred ------------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 656 ------------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 656 ------------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
....+.+.+||++||+.||.+|||+.++|+|+||+
T Consensus 290 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 290 NGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp GGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred cCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 11125677999999999999999999999999985
No 93
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-39 Score=368.07 Aligned_cols=288 Identities=43% Similarity=0.681 Sum_probs=214.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.++|++.+.||+|+||.||+|++..+|+.||||+++. .......+.+|+.+++.++||||++++++|.+....
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~- 77 (303)
T 1zy4_A 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNF- 77 (303)
T ss_dssp BHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCC-
T ss_pred CcccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcch-
Confidence 3456789999999999999999999999999999999864 234456789999999999999999999998653210
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...........+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 78 --------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 131 (303)
T 1zy4_A 78 --------------------------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131 (303)
T ss_dssp --------------------------CC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------hhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHH
Confidence 000011123567899999996 59999998544 58889999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++............. ..............||+.|+|||++.+...++.
T Consensus 132 LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 210 (303)
T 1zy4_A 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS-QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210 (303)
T ss_dssp HHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC--------------------------CTTSCHHHHTSCSCCCT
T ss_pred HHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccc-ccccccccccccCCCcccccCcccccCCCCCcc
Confidence 9999999999999999999999999999999986542210000000 000000112345679999999999987557899
Q ss_pred cchhHHHHHHHHHhhcCCchhHHHHHHHHHhhh-cCCCCCcc-ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 615 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ-KGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 615 ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~-~~~~p~~~-~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
++|||||||++|||++||............+.. ....|+.+ ...++.+.+||++||+.||.+|||+.++++|+|+...
T Consensus 211 ~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 999999999999999999866554444333332 23344433 3345678999999999999999999999999999876
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
..+
T Consensus 291 ~~~ 293 (303)
T 1zy4_A 291 HQD 293 (303)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
No 94
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=382.10 Aligned_cols=260 Identities=25% Similarity=0.346 Sum_probs=203.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc---hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++.+|+.||||+++...... .....+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--- 83 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee---
Confidence 34578999999999999999999999999999999987543221 122468899999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 84 -------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 126 (346)
T 1ua2_A 84 -------------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126 (346)
T ss_dssp -------------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHH
Confidence 3457999999999999988765 46899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 127 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 191 (346)
T 1ua2_A 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYG 191 (346)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCC
T ss_pred HHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc---------------ccCCcccccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999998653211 1123457999999999998755689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-C------------------------ccccCCHHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-P------------------------SWVAKFSEQESL 665 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~------------------------~~~~~~~~l~~L 665 (1196)
.++|||||||++|||++ ||................+..+ . .+...++++.+|
T Consensus 192 ~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (346)
T 1ua2_A 192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDL 271 (346)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHH
T ss_pred chhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHH
Confidence 99999999999999996 6655554444433332211111 0 013345789999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||+.||.+|||+.++++|+||.+.
T Consensus 272 i~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 272 IQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp HHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred HHHHhccChhhCCCHHHHhcChhhhcC
Confidence 999999999999999999999999764
No 95
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.9e-40 Score=384.55 Aligned_cols=261 Identities=28% Similarity=0.388 Sum_probs=204.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 97 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 97 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC-----
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc-----
Confidence 358999999999999999999999999999999999865555556678999999999999999999999884321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+|||||+++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 98 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~ 146 (371)
T 2xrw_A 98 -----------------------------SLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA 146 (371)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccccceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC
Confidence 011245789999999999998885 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ......+||+.|+|||++.+ ..++.++||
T Consensus 147 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 209 (371)
T 2xrw_A 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 209 (371)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCCCC--------------------------------CTTCCHHHHTT-CCCCTTHHH
T ss_pred CeecccCCHHHEEEcCCCCEEEEEeecccccccc----------------cccCCceecCCccCHHHhcC-CCCCchHhH
Confidence 9999999999999999999999999999864321 11234589999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc---------------------------------------c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------------------------------------V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------------------------------------~ 656 (1196)
|||||++|||++ ||................+..++.+ .
T Consensus 210 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
T 2xrw_A 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 289 (371)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccc
Confidence 999999999996 8876655444433332211111000 0
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
..++++.+||++||+.||.+|||++++|+||||...
T Consensus 290 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 290 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred cccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 013568899999999999999999999999998654
No 96
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.8e-40 Score=380.53 Aligned_cols=260 Identities=25% Similarity=0.411 Sum_probs=210.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 95 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK------- 95 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------
Confidence 3689999999999999999999999999999999997665555566778899999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 142 (331)
T 4aaa_A 96 ---------------------------------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142 (331)
T ss_dssp ---------------------------------TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999986 566666667789999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 207 (331)
T 4aaa_A 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYDDEVATRWYRAPELLVGDVKYGKAVD 207 (331)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------CCCCCTTCCHHHHTTCTTCCTHHH
T ss_pred CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc---------------cccCCCcCCccccCcccccCCCCcchHHH
Confidence 999999999999999999999999999997653221 01234578999999999987557899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLL 666 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~~l~~LI 666 (1196)
||||||++|+|++ ||................+..++ .+...++.+.+||
T Consensus 208 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 287 (331)
T 4aaa_A 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLA 287 (331)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHH
Confidence 9999999999996 78765554443333221111110 1124567899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++|+|+||+...
T Consensus 288 ~~~L~~dP~~Rpt~~ell~hp~f~~~~ 314 (331)
T 4aaa_A 288 KKCLHIDPDKRPFCAELLHHDFFQMDG 314 (331)
T ss_dssp HHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred HHHhccCcccCCCHHHHhcCchhccCC
Confidence 999999999999999999999998754
No 97
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.3e-40 Score=371.15 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||+++...........+.++...++.++||||+++++++.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------- 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------- 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--------
Confidence 478999999999999999999999999999999997554433334445556666888899999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+++|.+++.. ...+++..++.++.||+.||+||
T Consensus 78 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 125 (290)
T 3fme_A 78 --------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125 (290)
T ss_dssp --------------------------------SSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999998777653 46799999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc---CCCC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~ 611 (1196)
|++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++. ....
T Consensus 126 H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 189 (290)
T 3fme_A 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV----------------AKDIDAGCKPYMAPERINPELNQKG 189 (290)
T ss_dssp HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------------------------------CCCCCCSCHHHHSCCTTC--
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------cccccCCCccccChhhcChhhcCcC
Confidence 998 99999999999999999999999999998653221 122347999999999973 2356
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||
T Consensus 190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 8999999999999999996 7765332222222222233322233456789999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
|...
T Consensus 270 f~~~ 273 (290)
T 3fme_A 270 FTLH 273 (290)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8653
No 98
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=380.65 Aligned_cols=257 Identities=25% Similarity=0.381 Sum_probs=204.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pnIV~l~~~~~e~~~~~~~ 458 (1196)
++|++++.||+|+||.||+|.+. +++.||||++............+.+|+.+|+.++| |||+++++++..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------- 80 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 80 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-------
Confidence 57999999999999999999985 79999999998766666666789999999999977 999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 81 ---------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~ 127 (343)
T 3dbq_A 81 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127 (343)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------CCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 45789999988889999999988999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----------
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---------- 608 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------- 608 (1196)
||+||||||+|||++ ++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 128 ~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 193 (343)
T 3dbq_A 128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193 (343)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------CCCCSSCCHHHHHHCC--------
T ss_pred CeecCCCCcceEEEE-CCcEEEeecccccccCcccc-------------cccCCCCcCCcCcCCHHHHhhcccccccccc
Confidence 999999999999997 68899999999986532210 111235689999999999864
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||..........................++++.+||.+||+.||.+|||+.++++
T Consensus 194 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 2458899999999999999996 7765433322222222122222222234568999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|+|+...
T Consensus 274 hp~~~~~ 280 (343)
T 3dbq_A 274 HPYVQIQ 280 (343)
T ss_dssp SHHHHSC
T ss_pred Ccccccc
Confidence 9998654
No 99
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.2e-40 Score=386.54 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||++++++|.....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----- 102 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----- 102 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCc-----
Confidence 478999999999999999999999999999999987655555566789999999999999999999998743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 103 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 152 (367)
T 2fst_X 103 -----------------------------LEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 152 (367)
T ss_dssp -----------------------------GGGCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 012345799999999899988865 67999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 153 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 214 (367)
T 2fst_X 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTAD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214 (367)
T ss_dssp CCCCCCCGGGEEECTTCCEEECC---------------------------------CCCTTCCHHHHTTCCSCCTTHHHH
T ss_pred eeeCCCCHhhEEECCCCCEEEeeccccccccc------------------cCCCcCcCcCccChHHHcCCcCCCchhhHH
Confidence 99999999999999999999999999986421 123468999999999998756799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------------CC-----CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LP-----PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p-----~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||...........+....+. .+ ..+...++.+.+||++
T Consensus 215 slG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~ 294 (367)
T 2fst_X 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 294 (367)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 99999999996 78765544333322221111 11 1123456789999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++|+||||.+..
T Consensus 295 mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 295 MLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hCCCCcccCcCHHHHhcChhhhhcc
Confidence 9999999999999999999998753
No 100
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=100.00 E-value=7.9e-40 Score=387.21 Aligned_cols=357 Identities=11% Similarity=0.055 Sum_probs=272.4
Q ss_pred ccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCC
Q 000993 735 LRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHE 808 (1196)
Q Consensus 735 l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD 808 (1196)
+.+.+.++|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+ .|++|+.++|||+
T Consensus 13 ~~~~~~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~-~d~~~~~~~LrP~ 91 (401)
T 1evl_A 13 YHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPM 91 (401)
T ss_dssp EECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE-EEETTEEEEECSC
T ss_pred eEecCCCCcceEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe-EecCCceEEEcCC
Confidence 334566899999999999999999999999999999999999999 222 234456789999 9999999999999
Q ss_pred CcHHHHHHHHhCC----CCceeEEEecCeeecCCC--CC---CCcceeEeEEEEeCCCCccchH---HHHHHHHHHHHHc
Q 000993 809 LRLPFIRWAISNQ----KSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRF 876 (1196)
Q Consensus 809 ~T~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L~~l 876 (1196)
.|++++|+++++. ..|+|+||+|+|||+|.+ +. |.+||+|+|+|+||. ...+|+ |+|.++.++|+.|
T Consensus 92 ~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~-~~~~~~e~~e~i~~~~~~~~~l 170 (401)
T 1evl_A 92 NCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCT-EEQIRDEVNGCIRLVYDMYSTF 170 (401)
T ss_dssp SHHHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEC-GGGHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCC-HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998642 469999999999999884 64 456799999999996 567787 5999999999999
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+.+ +.+.+++.. ...+|..+.+.. +.. ..++++...+++.
T Consensus 171 gl~~-~~~~~~~~~-----~~~~~~~~~~~~----a~~------------------~~~~~l~~~g~~~----------- 211 (401)
T 1evl_A 171 GFEK-IVVKLSTRP-----EKRIGSDEMWDR----AEA------------------DLAVALEENNIPF----------- 211 (401)
T ss_dssp TCSC-CEEEEECCC-----SSCCSCHHHHHH----HHH------------------HHHHHHHHTTCCC-----------
T ss_pred CCCc-eEEEEecCC-----cccCCCHHHHHH----HHH------------------HHHHHHHhcCCCc-----------
Confidence 9974 999999853 011121111100 000 0011111111100
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCC--CCCCccceEEEEEecCCCCcccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
+ +. ... ...+| . .+|+.+++ |++||+|++|.-|.. +.
T Consensus 212 -------~----~~---~~~-----------~~~y~--~--~~d~~~~~~~G~~~~~gt~~~d~~l------------~~ 250 (401)
T 1evl_A 212 -------E----YQ---LGE-----------GAFYG--P--KIEFTLYDCLDRAWQCGTVQLDFSL------------PS 250 (401)
T ss_dssp -------E----EE---TTC-----------SBTTB--C--EEEEEEECTTCCEEEEEEEEEESSH------------HH
T ss_pred -------e----ec---CCC-----------ccccC--C--CcCeEEEecCCCeEEeeeeeecccc------------cc
Confidence 0 00 000 00011 2 25777777 999999999843321 35
Q ss_pred ccccccchhhhhccccccccccCCCCCCCccee-cc--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHH
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERM 1108 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~ 1108 (1196)
+.|+||++. .|. ..+|++|+ ++ |+|||+.+|.+ +..+. ..++.+|+|++.+ ++...+|.
T Consensus 251 ~~~~~y~~~---~g~----------~~~p~~~~~~~~GgieRli~~l~e~~~~~~p~-~~ap~~v~vi~~~-~~~~~~a~ 315 (401)
T 1evl_A 251 RLSASYVGE---DNE----------RKVPVMIHRAILGSMERFIGILTEEFAGFFPT-WLAPVQVVIMNIT-DSQSEYVN 315 (401)
T ss_dssp HTTCCEECT---TSC----------EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCT-TTCSSCEEEEESS-GGGHHHHH
T ss_pred ccCCEEECC---CCC----------CcCcEEEEecCCCcHHHHHHHHHHHhCCcCCC-CCCCeEEEEEecC-HHHHHHHH
Confidence 679999864 222 24699999 88 99999988764 22222 2467899999996 77889999
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1109 ELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1109 ~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
+++++||+.|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||+|.+|+|..++++++++.|++.++..
T Consensus 316 ~l~~~Lr~~Gi~v~~d~~-~~~~~~k~~~A~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~q~~v~~~el~~~l~~~~~~~ 394 (401)
T 1evl_A 316 ELTQKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 394 (401)
T ss_dssp HHHHHHHHTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTSCEEEEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhhh
Confidence 999999999999998876 6799999999999999999999999999999999999999999999999999999888754
Q ss_pred c
Q 000993 1189 F 1189 (1196)
Q Consensus 1189 ~ 1189 (1196)
.
T Consensus 395 ~ 395 (401)
T 1evl_A 395 S 395 (401)
T ss_dssp C
T ss_pred h
Confidence 3
No 101
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.8e-39 Score=372.80 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=209.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+..+.||+|+||.||+|+++.+|+.||||++..... ...+.+.+|+.+++.++||||++++++|..
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 113 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLV---------- 113 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 47778899999999999999999999999999975443 235678899999999999999999998743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++ ++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 114 ------------------------------~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 114 ------------------------------GEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp ------------------------------TTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346799999996 589888764 569999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++||||
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s 226 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-SLYATEVDIWS 226 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHH
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCc---------------cccccccCCccccCHhhhcC-CCCCchhhHHH
Confidence 999999999999999999999999997643211 11234579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||......+...................++.+.+||.+||+.||.+|||+.++++|+|+.+.
T Consensus 227 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 9999999996 77765554444333332222223344567899999999999999999999999999999764
No 102
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.2e-40 Score=366.88 Aligned_cols=261 Identities=28% Similarity=0.479 Sum_probs=215.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.++|++.+.||+|+||.||+|+++.+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRRE------- 76 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------
Confidence 45789999999999999999999999999999999975443 2345778999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+||||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 123 (276)
T 2yex_A 77 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123 (276)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999975 999999887889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||++......... .......||+.|+|||++.+...++.++|
T Consensus 124 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 190 (276)
T 2yex_A 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPVD 190 (276)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHH
T ss_pred CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch-------------hcccCCccccCccChHHHhcCCCCCCcch
Confidence 99999999999999999999999999999765322110 11234579999999999987444578999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||||+++|||++ ||....................+.+...++.+.+||++||+.||.+|||+.++++|+||.+..
T Consensus 191 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 9999999999996 776544332222333333333344566788999999999999999999999999999998753
No 103
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.5e-40 Score=386.50 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+|++.+.||+|+||+||+|.+. +++.||||++............+.+|+.+|+.++ ||||+++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~------- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------
Confidence 46999999999999999999987 4999999999876666666778999999999996 5999999988742
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 128 ---------------------------------~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 128 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp ---------------------------------SSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34689999977789999999888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---------
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--------- 609 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------- 609 (1196)
||+||||||+|||++ ++.+||+|||+++.+..... .......+||+.|+|||++.+.
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 240 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----------------------CCSCCCGGGCCHHHHHCC---------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-------------cccCCCCCcCCCccChHHhhhcccccccccc
Confidence 999999999999995 58999999999986532210 1112346899999999998751
Q ss_pred -CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 -~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+.++|||||||+||||++ ||............+.......+.....++++.+||++||+.||.+|||+.++|+
T Consensus 241 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 358899999999999999997 8865433322222222121111122233568999999999999999999999999
Q ss_pred ccCCCCch
Q 000993 686 DALPPQME 693 (1196)
Q Consensus 686 ~~~~~~~~ 693 (1196)
|+|+....
T Consensus 321 hp~~~~~~ 328 (390)
T 2zmd_A 321 HPYVQIQT 328 (390)
T ss_dssp SHHHHSCC
T ss_pred CcCccccC
Confidence 99986543
No 104
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.5e-40 Score=367.04 Aligned_cols=252 Identities=29% Similarity=0.492 Sum_probs=209.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------ 80 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec------
Confidence 46899999999999999999999999999999999864321 11234568899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T 3fdn_A 81 ----------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126 (279)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 599999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 127 ~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (279)
T 3fdn_A 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTDLCGTLDYLPPEMIEG-RMHDEKV 188 (279)
T ss_dssp TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------------------------CCCCTTCCHHHHTT-CCCCTTH
T ss_pred hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-----------------cccccCCCCCccCHhHhcc-CCCCccc
Confidence 999999999999999999999999999998643211 1234578999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||||+++|+|++ ||...................|. ..++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 189 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred hhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 99999999999996 78766555544444333333332 35678999999999999999999999999998754
No 105
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-39 Score=364.36 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=214.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.++.++..||+|++..... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 77 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFED------- 77 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec-------
Confidence 45789999999999999999999999999999999975433 235678999999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||+
T Consensus 78 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (277)
T 3f3z_A 78 ---------------------------------NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124 (277)
T ss_dssp ---------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 5999999888889999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||+ +.++.+||+|||++....... ......||+.|+|||++.+ .++.
T Consensus 125 ~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~--~~~~ 186 (277)
T 3f3z_A 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----------------MMRTKVGTPYYVSPQVLEG--LYGP 186 (277)
T ss_dssp TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----------------CBCCCCSCTTTCCHHHHTT--CBCT
T ss_pred CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----------------chhccCCCCCccChHHhcc--cCCc
Confidence 999999999999999 778899999999997643211 1234579999999999986 4899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++||||||+++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++++|+||.
T Consensus 187 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 266 (277)
T 3f3z_A 187 ECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266 (277)
T ss_dssp THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred hhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 9999999999999996 88776666555554443333333 3346778999999999999999999999999999886
Q ss_pred C
Q 000993 691 Q 691 (1196)
Q Consensus 691 ~ 691 (1196)
+
T Consensus 267 ~ 267 (277)
T 3f3z_A 267 K 267 (277)
T ss_dssp H
T ss_pred c
Confidence 4
No 106
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-40 Score=398.45 Aligned_cols=256 Identities=26% Similarity=0.414 Sum_probs=214.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...+++|.+.+.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~---- 87 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST---- 87 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3456899999999999999999999999999999999975321 11234678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|
T Consensus 88 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~ 131 (476)
T 2y94_A 88 ------------------------------------PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131 (476)
T ss_dssp ------------------------------------SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+++...... .....+||+.|+|||++.+...++.
T Consensus 132 LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~ 195 (476)
T 2y94_A 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGP 195 (476)
T ss_dssp HHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC----------------CBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred HHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc----------------cccccCCCcCeEChhhccCCCCCCC
Confidence 999999999999999999999999999999998643211 1234589999999999998544578
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|+|++ ||...........+.......| ...++++.+||++||+.||.+|||+.++++|+||.+
T Consensus 196 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred cceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 9999999999999996 8876655555444443333233 345679999999999999999999999999999865
No 107
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.2e-40 Score=372.79 Aligned_cols=268 Identities=26% Similarity=0.430 Sum_probs=206.0
Q ss_pred CCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.+++.+.|.+. +.||+|+||.||+|++..+++.||||++.... ......+.+|+.+++++ +||||+++++++.+
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-- 82 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-- 82 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--
Confidence 45677889986 78999999999999999999999999997543 23456789999999985 79999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 83 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l 124 (316)
T 2ac3_A 83 --------------------------------------EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124 (316)
T ss_dssp --------------------------------------TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 356899999997 69999999888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|||++||+||||||+|||++.++. +||+|||+++........... ........+||+.|+|||++.+.
T Consensus 125 ~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~ 196 (316)
T 2ac3_A 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI--------STPELLTPCGSAEYMAPEVVEAF 196 (316)
T ss_dssp HHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------CCSGGGCCHHHHHHT
T ss_pred HHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc--------cccccccccCCcCccChHHhhcc
Confidence 9999999999999999999998776 999999999865322110000 00112345799999999998741
Q ss_pred ----CCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHHH
Q 000993 610 ----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESLL 666 (1196)
Q Consensus 610 ----~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI 666 (1196)
..++.++|||||||++|||++ ||.... ...............|. .+...++.+.+||
T Consensus 197 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 276 (316)
T 2ac3_A 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLI 276 (316)
T ss_dssp SHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred cccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHH
Confidence 247899999999999999996 775432 11122222222223332 2345678999999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++++|+||.+..
T Consensus 277 ~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 277 SKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 999999999999999999999998754
No 108
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.6e-40 Score=379.48 Aligned_cols=255 Identities=25% Similarity=0.457 Sum_probs=191.1
Q ss_pred CcccCCceEE---eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeec
Q 000993 377 SRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~---~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~ 452 (1196)
+.+.++|++. +.||+|+||.||+|.++.+|+.||||++... ....+.+|+.+++.+. ||||++++++|.+
T Consensus 4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 77 (325)
T 3kn6_A 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHD- 77 (325)
T ss_dssp CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-
Confidence 3445667775 7899999999999999999999999998632 3467889999999997 9999999998732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.|
T Consensus 78 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~ 118 (325)
T 3kn6_A 78 ---------------------------------------QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118 (325)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 456899999996 4999999998899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......+||+.|+|||++.+
T Consensus 119 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~ 183 (325)
T 3kn6_A 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---------------QPLKTPCFTLHYAAPELLNQ 183 (325)
T ss_dssp HHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------------------
T ss_pred HHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC---------------CcccccCCCcCccCHHHhcC
Confidence 9999999999999999999998765 79999999997543211 11234578999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHH-------HHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAME-------RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~-------~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||++|+|++ ||..... .+............+ +.+...++++.+||++||+.||.+|
T Consensus 184 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 262 (325)
T 3kn6_A 184 -NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262 (325)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred -CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence 568999999999999999996 7765432 222222222222222 2445678899999999999999999
Q ss_pred CCHHHHHhccCCCCc
Q 000993 678 PSATELLQDALPPQM 692 (1196)
Q Consensus 678 Pta~eiL~~~~~~~~ 692 (1196)
||+.++++|+|+...
T Consensus 263 pt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 263 LKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCTTTSTTCGGGCTT
T ss_pred CCHHHHhcChhhccC
Confidence 999999999999864
No 109
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.1e-40 Score=375.86 Aligned_cols=264 Identities=26% Similarity=0.413 Sum_probs=210.2
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....++|++.+.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 85 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-- 85 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE--
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC--
Confidence 4556899999999999999999999999999999999976443 3334567899999999999999999999875421
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 86 ----------------------------------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 131 (311)
T 3ork_A 86 ----------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131 (311)
T ss_dssp ----------------------------------TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 11345799999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++.+...... .......+||+.|+|||++.+ ..++.
T Consensus 132 lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 198 (311)
T 3ork_A 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------VTQTAAVIGTAQYLSPEQARG-DSVDA 198 (311)
T ss_dssp HHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------------------CCTTCCHHHHHT-CCCCH
T ss_pred HHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc------------cccccccCcCcccCCHHHhcC-CCCCc
Confidence 99999999999999999999999999999999865432110 112234579999999999988 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
++|||||||++|||++ ||...................+. .....++++.+||.+||+.||.+||++.++++|+|+
T Consensus 199 ~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 9999999999999997 88777666655555443322221 223467899999999999999999999999998754
No 110
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.2e-39 Score=378.84 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=209.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|+.++.||+|+||.||+|++..+|+.||||++...... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 4599999999999999999999999999999999765432 3344678999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||.|+|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 126 --------------------------------~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 173 (348)
T 1u5q_A 126 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173 (348)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999999999888864 56799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||||+|||++.++.+||+|||+++.... ....+||+.|+|||++.+ ...++.++
T Consensus 174 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 234 (348)
T 1u5q_A 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 234 (348)
T ss_dssp TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHH
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeccCceecCC-------------------CCcccCCcceeCHhhhccccCCCCCcHH
Confidence 999999999999999999999999999975421 124579999999999853 24689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|||++ ||.............. ....+......++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 235 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 99999999999996 7766555444433333 222222233456789999999999999999999999999987543
No 111
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.5e-39 Score=364.62 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=216.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-------chhHHHHHHHHHHHHhcC-CCCeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-------LPVNDRILREVATLSRLQ-HQHVVRYYQA 448 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-------~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~ 448 (1196)
..+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... ....+.+.+|+.+++.+. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 45678999999999999999999999999999999999765321 123456889999999995 9999999988
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
+.. ...+|+|||||+ ++|.+++.....+++..++.++.|
T Consensus 93 ~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q 132 (298)
T 1phk_A 93 YET----------------------------------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132 (298)
T ss_dssp EEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHH
T ss_pred ecc----------------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHH
Confidence 732 456899999997 599999998889999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++||+||||||+||+++.++.+||+|||+++...... ......||+.|+|||++.
T Consensus 133 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc----------------ccccccCCccccCHHHhc
Confidence 9999999999999999999999999999999999999997643211 123457899999999986
Q ss_pred -----CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCC
Q 000993 608 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 608 -----~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
....++.++||||||+++|+|++ ||...................+ +.+...++.+.+||.+||+.||.+||
T Consensus 197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCC
Confidence 22458899999999999999996 7766555544444443333333 34556788999999999999999999
Q ss_pred CHHHHHhccCCCCchHHH
Q 000993 679 SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 679 ta~eiL~~~~~~~~~~~~ 696 (1196)
|+.++++|+||.+...+.
T Consensus 277 s~~~ll~h~~~~~~~~~~ 294 (298)
T 1phk_A 277 TAEEALAHPFFQQYVVEE 294 (298)
T ss_dssp CHHHHTTSGGGCTTC---
T ss_pred CHHHHHhChHhhhccchh
Confidence 999999999999876543
No 112
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.6e-39 Score=380.92 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=210.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|.....
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 115 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS---- 115 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS----
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC----
Confidence 3478999999999999999999999999999999998655555566789999999999999999999998843210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|||||+++|.+++. ..+++..++.++.||+.||+|||++
T Consensus 116 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~ 163 (371)
T 4exu_A 116 ------------------------------LRNFYDFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA 163 (371)
T ss_dssp ------------------------------STTCCCCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccceeEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01122458999999999988874 3499999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+...++.++||
T Consensus 164 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (371)
T 4exu_A 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDI 225 (371)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECSTTCC--------------------------CTTCCCTTSCHHHHSCCSCCCTTHHH
T ss_pred CCcCCCcCHHHeEECCCCCEEEEecCcccccccC------------------cCCcccCccccCHHHhcCCCCCCcHHhH
Confidence 9999999999999999999999999999754211 2345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||......+.........+..+ ..+...++.+.+||+
T Consensus 226 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (371)
T 4exu_A 226 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305 (371)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHH
Confidence 999999999996 8876555444433322111111 112345778999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++|+||||....
T Consensus 306 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 306 KMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHCCCChhhcCCHHHHhcCcccccCC
Confidence 99999999999999999999998653
No 113
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.9e-39 Score=379.02 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=210.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|++..+++.||||++... ........+.+|+.+|+.++||||+++++++....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 98 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 98 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC-------
Confidence 5899999999999999999999999999999998743 33445578999999999999999999998874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 99 ----------------------------~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 99 ----------------------------IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp ----------------------------TTTCCCEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 012346899999999999998865 469999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+...++.++||||
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 217 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHH
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc------------cccccccccccCCCCCHHhcCCCCCCcchhHHH
Confidence 99999999999999999999999999865432110 011244589999999999876566899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC--------------------------C--CccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------P--PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------p--~~~~~~~~~l~~LI~~c 669 (1196)
|||++|+|++ ||................+.. + ..+...++++.+||++|
T Consensus 218 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 297 (364)
T 3qyz_A 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297 (364)
T ss_dssp HHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 776544332222221111100 0 01134567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|+.||.+|||+.++|+||||.+.
T Consensus 298 L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 298 LTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp TCSSTTTSCCHHHHHTSGGGTTT
T ss_pred cCCChhhCCCHHHHhcCcchhhc
Confidence 99999999999999999999875
No 114
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.2e-40 Score=381.83 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=206.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+.++|++.+.||+|+||+||+|.++.+|+.||||++...... ..+|+.++..+ +||||++++++|.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~----- 86 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYD----- 86 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEE-----
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEE-----
Confidence 44568899999999999999999999999999999999754332 34688888888 7999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||. |+|.+++.....+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 87 -----------------------------------DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----------------------------------CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-C---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-N---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+|||+..+ + .+||+|||+++...... ......+||+.|+|||++.+ .
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~ 195 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------GLLMTPCYTANFVAPEVLER-Q 195 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------CCBCCSSCCSSCCCHHHHHH-H
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------CceeccCCCccccCHHHhcC-C
Confidence 999999999999999998543 3 49999999998653211 01234589999999999987 4
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchh---HHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
.|+.++|||||||++|||++ ||... ...+....+.......+. .+...++++.+||++||..||.+|||+.++
T Consensus 196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 58899999999999999996 77642 233333333333333332 455678899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+|+..
T Consensus 276 l~hp~~~~ 283 (342)
T 2qr7_A 276 LRHPWIVH 283 (342)
T ss_dssp TTSHHHHT
T ss_pred hcCCeecC
Confidence 99999854
No 115
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.3e-39 Score=387.11 Aligned_cols=256 Identities=22% Similarity=0.340 Sum_probs=207.0
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc------CCCCeeeeeee
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL------QHQHVVRYYQA 448 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L------~HpnIV~l~~~ 448 (1196)
+......+|++++.||+|+||+||+|.+..+++.||||+++. .......+.+|+.+++.+ +||||++++++
T Consensus 91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~ 167 (429)
T 3kvw_A 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN 167 (429)
T ss_dssp TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence 344556789999999999999999999999999999999863 234456788899888887 57799999988
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~ 526 (1196)
|.. ...+|+|||||+++|.+++.... .+++..++.++.
T Consensus 168 ~~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 207 (429)
T 3kvw_A 168 FTF----------------------------------------RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAH 207 (429)
T ss_dssp EEE----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred ccc----------------------------------------CCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHH
Confidence 732 35689999999999999997654 499999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCC--eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
||+.||+|||++||+||||||+|||++.++. +||+|||+|+.... .....+||+.|+|||
T Consensus 208 qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~------------------~~~~~~gt~~y~aPE 269 (429)
T 3kvw_A 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ------------------RVYTYIQSRFYRAPE 269 (429)
T ss_dssp HHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCHH
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC------------------cccccCCCCCccChH
Confidence 9999999999999999999999999999887 99999999965321 123458999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---------------------------
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS--------------------------- 654 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~--------------------------- 654 (1196)
++.+ ..|+.++|||||||+||||++ ||......+.........+..++.
T Consensus 270 ~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (429)
T 3kvw_A 270 VILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLS 348 (429)
T ss_dssp HHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCC
T ss_pred HHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccc
Confidence 9988 568999999999999999997 776655544433322211111100
Q ss_pred ------------------------c-----ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 655 ------------------------W-----VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 655 ------------------------~-----~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
| ...++.+.+||++||+.||.+|||+.++|+||||.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 349 DGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp C--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred cccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 0 0125678999999999999999999999999999875
No 116
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.9e-40 Score=411.94 Aligned_cols=260 Identities=26% Similarity=0.382 Sum_probs=222.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+|..+ +||||++++++|.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~------ 412 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 412 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB------
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE------
Confidence 46899999999999999999999999999999999974321 112345678899999988 7999999998872
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|||||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 413 ----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 458 (674)
T 3pfq_A 413 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458 (674)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||||+.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 459 H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~~~~ 522 (674)
T 3pfq_A 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 522 (674)
T ss_dssp HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---------------CCBCCCCSCSSSCCHHHHTC-CCBSTH
T ss_pred HhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC---------------cccccccCCCcccCHhhhcC-CCCCcc
Confidence 99999999999999999999999999999997532111 12345689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~ 687 (1196)
+|||||||+||||++ ||......+....++.....+|. ..++++.+||++||+.||.+||++ ++|++|+
T Consensus 523 ~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred ceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 999999999999996 89887777777666665555554 456799999999999999999997 9999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.|+.+
T Consensus 600 ff~~i~w~~l 609 (674)
T 3pfq_A 600 FFRYIDWEKL 609 (674)
T ss_dssp GGSSCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999988755
No 117
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=379.86 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=209.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
+.+.++|++.+.||+|+||.||+|+++.+|+.||||+++....... ....+.+|+.+|+.++||||++++++|.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4567899999999999999999999999999999999986542211 2345778999999999999999999873
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-C-CHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
+ ...+|+||||++ | +|.+++.....+++..++.++.||
T Consensus 100 ~----------------------------------------~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi 139 (335)
T 3dls_A 100 N----------------------------------------QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139 (335)
T ss_dssp C----------------------------------------SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2 457899999985 5 899999988899999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 140 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 203 (335)
T 3dls_A 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------LFYTFCGTIEYCAPEVLMG 203 (335)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCEECSCGGGCCHHHHTT
T ss_pred HHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC----------------ceeccCCCccccChhhhcC
Confidence 999999999999999999999999999999999999997653211 1234579999999999988
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||...... .. .. .......++++.+||++||+.||.+|||+.++++
T Consensus 204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~-~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE-AA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT-TC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh-hc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 5445889999999999999996 77653321 11 11 1122235679999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|+|+.+.
T Consensus 275 hp~~~~~ 281 (335)
T 3dls_A 275 DPWVTQP 281 (335)
T ss_dssp CTTTTCC
T ss_pred CccccCC
Confidence 9999764
No 118
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.9e-40 Score=401.07 Aligned_cols=258 Identities=27% Similarity=0.412 Sum_probs=213.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-------- 254 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------- 254 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe--------
Confidence 4789999999999999999999999999999999975321 1123456889999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|+|||||+ |+|.+++.... .+++..++.++.||+.||+||
T Consensus 255 --------------------------------~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 255 --------------------------------TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999987654 499999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... .....+||+.|+|||++.+ ..|+.+
T Consensus 303 H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------~~~~~~GT~~Y~APEvl~~-~~~~~~ 365 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFS 365 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----------------CEECCCSCGGGCCHHHHTT-CEESSH
T ss_pred HHCCEeccCCchheEEEeCCCCeEEEecccceecccCc----------------cccccCCCccccCHHHHcC-CCCCcc
Confidence 99999999999999999999999999999997643211 1234589999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~ei 683 (1196)
+|||||||++|||++ ||.... ..............+| ...++++++||++||+.||.+|| +++++
T Consensus 366 ~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei 442 (576)
T 2acx_A 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442 (576)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence 999999999999996 886542 1222222222222222 34678999999999999999999 89999
Q ss_pred HhccCCCCchHHHH
Q 000993 684 LQDALPPQMEYELL 697 (1196)
Q Consensus 684 L~~~~~~~~~~~~~ 697 (1196)
++|+||....+..+
T Consensus 443 l~HpfF~~i~w~~l 456 (576)
T 2acx_A 443 KEHPLFKKLNFKRL 456 (576)
T ss_dssp HTSGGGTTCCHHHH
T ss_pred HhChhhccCCHHHH
Confidence 99999999987644
No 119
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.5e-39 Score=385.78 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=205.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|++.+.||+|+||.||+|+++.+|+.||||++..... ...+|+.+|+.++|||||+++++|...+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~----- 121 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGE----- 121 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEET-----
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCC-----
Confidence 3579999999999999999999999999999999864322 23479999999999999999998854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+..++++|||||+++|.+++. ....+++..++.++.||+.||+||
T Consensus 122 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 172 (420)
T 1j1b_A 122 -----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172 (420)
T ss_dssp -----------------------------TTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345788999999998877664 346799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|++||+||||||+|||++.+ +.+||+|||+++.+.... .....+||+.|+|||++.+...|+.
T Consensus 173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 236 (420)
T 1j1b_A 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTS 236 (420)
T ss_dssp HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred HHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC----------------CceeeeeCCCcCCHHHHcCCCCCCc
Confidence 99999999999999999965 568999999998643211 1234578999999999987557999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-----------------CCCCC----cc-----ccCCHHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------GELPP----SW-----VAKFSEQESL 665 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-----------------~~~p~----~~-----~~~~~~l~~L 665 (1196)
++|||||||+||||++ ||...........++... ..+|. .| ...++++.+|
T Consensus 237 ~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~L 316 (420)
T 1j1b_A 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316 (420)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHH
Confidence 9999999999999996 787655444333332211 01111 01 2346789999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||..||.+|||+.++++|+||...
T Consensus 317 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 317 CSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HHHhccCChhHCCCHHHHhCCHhhccc
Confidence 999999999999999999999999764
No 120
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.9e-39 Score=367.37 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=199.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++ +|+.||||++............+.+|+.+|+.++||||+++++++.+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 105 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-------- 105 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 47899999999999999999987 48999999998666565666789999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++..... +++..++.++.||+.||+||
T Consensus 106 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L 153 (309)
T 3p86_A 106 --------------------------------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153 (309)
T ss_dssp --------------------------------TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345699999997 599999987653 99999999999999999999
Q ss_pred HhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 536 HGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 536 Hs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++
T Consensus 154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (309)
T 3p86_A 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---------------LSSKSAAGTPEWMAPEVLRD-EPSN 217 (309)
T ss_dssp HTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------------------------CCTTSCHHHHTT-CCCC
T ss_pred HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc---------------cccccCCCCccccChhhhcC-CCCC
Confidence 9999 9999999999999999999999999997542211 11234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....... ....+......++++.+||++||+.||.+|||+.++++.
T Consensus 218 ~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999997 8877665554443322 223333334567899999999999999999999999863
No 121
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.9e-39 Score=364.05 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=211.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++...... ...+.+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 367999999999999999999999999999999997654221 135679999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 80 ------------------------------------KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 6999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+||+++.++ .+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~ 186 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----------------EFKNIFGTPEFVAPEIVNY-E 186 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------CCCGGGCCHHHHTT-C
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----------------cccccCCCcCccCcceecC-C
Confidence 9999999999999999998877 79999999997643211 1133579999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++||||||+++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++++|
T Consensus 187 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 68999999999999999996 77766555444443333333332 334567789999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+...
T Consensus 267 ~~~~~~ 272 (283)
T 3bhy_A 267 SWIKAI 272 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 122
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=376.90 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=210.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 99 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED----- 99 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-----
Confidence 478999999999999999999999999999999986432 233456789999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------------
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 513 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 513 (1196)
...+|+|||||+ ++|.+++...
T Consensus 100 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (345)
T 3hko_A 100 -----------------------------------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144 (345)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHH
T ss_pred -----------------------------------CCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccc
Confidence 456899999996 5999988521
Q ss_pred ------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccc
Q 000993 514 ------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQ 573 (1196)
Q Consensus 514 ------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~ 573 (1196)
..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~ 224 (345)
T 3hko_A 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224 (345)
T ss_dssp HHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTT
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccC
Confidence 1236778899999999999999999999999999999998776 89999999998653221
Q ss_pred cccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC
Q 000993 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG 649 (1196)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~ 649 (1196)
.. .........||+.|+|||++.+. ..++.++|||||||++|||++ ||......+..........
T Consensus 225 ~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 293 (345)
T 3hko_A 225 NG-----------EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL 293 (345)
T ss_dssp CC-------------------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred cc-----------ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc
Confidence 10 01123456799999999998752 468999999999999999996 8877666665555554443
Q ss_pred CCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 650 ELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 650 ~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+ +.+...++.+.+||.+||+.||.+|||+.++++||||.+..
T Consensus 294 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 294 CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 333 34455788999999999999999999999999999987754
No 123
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=373.47 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=208.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 97 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS----- 97 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc-----
Confidence 478999999999999999999999999999999997655555556789999999999999999999998743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|+||||++++|.+++.. .+++..++.++.||+.||+|||++|
T Consensus 98 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 98 -----------------------------LRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp -----------------------------GGGCCCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccceeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 011234699999999998887743 5999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++..... .....||+.|+|||++.+...++.++|||
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~ 208 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIW 208 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC--------------------------CCSBCCSCHHHHSCCSCCCTTHHHH
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------ccccccCcCcCCHHHHhCcCCCCchhhHH
Confidence 999999999999999999999999999754211 23457899999999998756789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------------CCCCCccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------------GELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------------~~~p~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||................ ..++..+...++++.+||++
T Consensus 209 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (353)
T 3coi_A 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288 (353)
T ss_dssp HHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHH
Confidence 99999999996 787654433322222110 11122234567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+||...
T Consensus 289 ~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 289 MLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HcCCCcccCCCHHHHhcCcchhhc
Confidence 999999999999999999999864
No 124
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.9e-39 Score=379.05 Aligned_cols=288 Identities=24% Similarity=0.360 Sum_probs=206.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++..+|+.||||++...... ..+|+.+|+.++|||||+++++|...+......
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 36899999999999999999999999999999998643222 237999999999999999999986543100000
Q ss_pred CCcCCCCcccccccccccc--cccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAA--SSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
... .. .......... ...............++++|||||+++|.+.+. ....+++..++.++.||+.||+
T Consensus 80 ~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 80 PQP---PD-DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccc---cc-ccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 000 00 0000000000 000000000113456799999999998877765 3567999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|||++||+||||||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+...+
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~ 219 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLGATEY 219 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----------------CCCCCCCCSSCCCHHHHTTCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----------------CCcCcccCCCccCHHHhcCCCCC
Confidence 99999999999999999998 57899999999998643211 12345789999999999876669
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQE 663 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~~l~ 663 (1196)
+.++|||||||++|||++ ||......+....++...+. +|. .....++++.
T Consensus 220 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3eb0_A 220 TPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI 299 (383)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHH
T ss_pred CcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHH
Confidence 999999999999999996 88766555444433321111 110 1123567899
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||++||+.||.+|||+.++++||||....
T Consensus 300 ~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 300 DLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred HHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 999999999999999999999999997653
No 125
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.8e-39 Score=397.17 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=214.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~------- 255 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE------- 255 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-------
Confidence 35789999999999999999999999999999999975321 1123457889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+ |+|.+++... ..+++..++.++.||+.||
T Consensus 256 ---------------------------------~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL 302 (543)
T 3c4z_A 256 ---------------------------------TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302 (543)
T ss_dssp ---------------------------------CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHH
Confidence 2456899999997 5999998753 3699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+++.+.... ......+||+.|+|||++.+ ..|
T Consensus 303 ~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~ 366 (543)
T 3c4z_A 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---------------TKTKGYAGTPGFMAPELLLG-EEY 366 (543)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---------------CCBCCCCSCTTTSCHHHHTT-CCB
T ss_pred HHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC---------------cccccccCCccccChhhhcC-CCC
Confidence 99999999999999999999999999999999998643211 11234589999999999988 579
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----H
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----A 680 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a 680 (1196)
+.++|||||||++|||++ ||.... ..+....+......+| ...++.+.+||++||+.||.+||+ +
T Consensus 367 ~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a 443 (543)
T 3c4z_A 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443 (543)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC---cccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence 999999999999999996 886542 2333333333333333 345779999999999999999996 5
Q ss_pred HHHHhccCCCCchHHHH
Q 000993 681 TELLQDALPPQMEYELL 697 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~~~~ 697 (1196)
+++++||||..+.+..+
T Consensus 444 ~ei~~Hpff~~i~w~~l 460 (543)
T 3c4z_A 444 DGLRTHPLFRDISWRQL 460 (543)
T ss_dssp HHHHTSGGGTTCCHHHH
T ss_pred HHHHcCccccCCCHHHH
Confidence 89999999999987644
No 126
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.1e-39 Score=374.18 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=204.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++++.||+|+||.||+|+++.+|+.||||+++..... ....++..|..+ ++.++||||+++++++.+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~------ 121 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFR------ 121 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC------
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe------
Confidence 457999999999999999999999999999999999755443 334455666655 778899999999998743
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+++|.+++. ....+++..++.++.||+.||+
T Consensus 122 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~ 167 (340)
T 3an0_A 122 ----------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167 (340)
T ss_dssp ----------------------------------SSCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34579999999999988876 3467999999999999999999
Q ss_pred HHHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC---C
Q 000993 534 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---W 609 (1196)
Q Consensus 534 yLHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~ 609 (1196)
|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 168 ~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~ 231 (340)
T 3an0_A 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQ 231 (340)
T ss_dssp HHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH----------------HHHHSSCCCCCCCHHHHSCCTTC
T ss_pred HHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc----------------ccccCCCCccccCcccccccccc
Confidence 99987 99999999999999999999999999998753221 1123479999999999753 2
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++.++|||||||++|||++ ||..........................++++.+||.+||+.||.+|||+.++++|
T Consensus 232 ~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 358899999999999999996 77653222222222222222222233467899999999999999999999999999
Q ss_pred cCCCC
Q 000993 687 ALPPQ 691 (1196)
Q Consensus 687 ~~~~~ 691 (1196)
+||..
T Consensus 312 p~f~~ 316 (340)
T 3an0_A 312 PFFTL 316 (340)
T ss_dssp HHHHH
T ss_pred cCccc
Confidence 98854
No 127
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.4e-39 Score=371.64 Aligned_cols=273 Identities=25% Similarity=0.372 Sum_probs=211.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|++..+|+.||||++... ........+.+|+.+++.++||||+++++++....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 82 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDS----- 82 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc-----
Confidence 357999999999999999999999999999999998633 33345567889999999999999999998863210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 83 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 83 ------------------------------FENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp ------------------------------STTCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cCccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012356899999999999998876 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++............ ..........+||+.|+|||++.+...++.++||
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 206 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP-----TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC---------------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred CeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCc-----cccccchhhccccccccCCeeeccCCCccchhhH
Confidence 99999999999999999999999999998754322110000 0001112345899999999998765678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CC-----CccccCCHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVAKFSEQESLL 666 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~~~~~l~~LI 666 (1196)
|||||++|||++ ||................+. .+ ..+...++++.+||
T Consensus 207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 286 (353)
T 2b9h_A 207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286 (353)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence 999999999996 77665544333222111000 00 01235677899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++++|+||....
T Consensus 287 ~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 287 QRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhcCcCcccCCCHHHHhcCccccccC
Confidence 999999999999999999999998754
No 128
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=378.58 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=206.6
Q ss_pred CCceE--EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 381 NDFEE--LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~--~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.|.+ .+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+|+.++||||++++++|.+
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 157 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFES------- 157 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 33444 678999999999999999999999999997532 2445679999999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 158 ---------------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 158 ---------------------------------KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp ---------------------------------SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5898888654 46999999999999999999999
Q ss_pred hCCCcccCCCcCcEEe--cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 537 s~gIiHrDLKp~NILl--d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ ..++.
T Consensus 205 ~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 267 (373)
T 2x4f_A 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------KLKVNFGTPEFLAPEVVNY-DFVSF 267 (373)
T ss_dssp HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------BCCCCCSSCTTCCHHHHTT-CBCCH
T ss_pred HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------ccccccCCCcEeChhhccC-CCCCc
Confidence 9999999999999999 556789999999998653211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|||++ ||......+....+.......+. .+...++++.+||.+||+.||.+|||+.++++||||.
T Consensus 268 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 9999999999999996 88776666555555544444433 4456788999999999999999999999999999998
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
....
T Consensus 348 ~~~~ 351 (373)
T 2x4f_A 348 DHKL 351 (373)
T ss_dssp CHHH
T ss_pred CCch
Confidence 7643
No 129
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.8e-39 Score=374.35 Aligned_cols=257 Identities=23% Similarity=0.450 Sum_probs=213.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--c----hhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--L----PVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--~----~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... . ...+.+.+|+.+++.+ +||||++++++|..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 456899999999999999999999999999999999765422 1 1245678999999999 89999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
....|+|||||+| +|.+++.....+++..++.++.||+.
T Consensus 172 ----------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~ 211 (365)
T 2y7j_A 172 ----------------------------------------SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211 (365)
T ss_dssp ----------------------------------------SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3568999999975 99999988888999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 609 (1196)
||.|||++||+||||||+|||++.++.+||+|||++..+.... .....+||+.|+|||++.+.
T Consensus 212 ~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 275 (365)
T 2y7j_A 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------KLRELCGTPGYLAPEILKCSM 275 (365)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHTT
T ss_pred HHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc----------------ccccCCCCCCccChhhccccc
Confidence 9999999999999999999999999999999999997653211 12345799999999998642
Q ss_pred ----CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 610 ----PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 610 ----~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
..++.++|||||||++|||++ ||...................+ +.+...++.+.+||++||+.||.+|||+.
T Consensus 276 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 355 (365)
T 2y7j_A 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355 (365)
T ss_dssp CTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 358899999999999999997 8876555444433333333322 34556788999999999999999999999
Q ss_pred HHHhccCCCC
Q 000993 682 ELLQDALPPQ 691 (1196)
Q Consensus 682 eiL~~~~~~~ 691 (1196)
++++||||++
T Consensus 356 ell~hp~f~r 365 (365)
T 2y7j_A 356 QALQHPFFER 365 (365)
T ss_dssp HHHHSGGGCC
T ss_pred HHhcCcccCC
Confidence 9999999863
No 130
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.5e-39 Score=366.43 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=210.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|.+.+.||+|+||.||+|+++.+|+.||+|+++.... .....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYES----- 77 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhccc-----
Confidence 3345789999999999999999999999999999999975332 234568899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 122 (304)
T 2jam_A 78 -----------------------------------TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122 (304)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+||++ +.++.+||+|||+++..... ......||+.|+|||++.+ ..+
T Consensus 123 H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (304)
T 2jam_A 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----------------IMSTACGTPGYVAPEVLAQ-KPY 184 (304)
T ss_dssp HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------TTHHHHSCCCBCCTTTBSS-CSC
T ss_pred HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------ccccccCCCCccChHHhcc-CCC
Confidence 99999999999999999 77889999999998743211 1233579999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++++|+|
T Consensus 185 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999996 7776655544444433333332 234566789999999999999999999999999998
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+...
T Consensus 265 ~~~~ 268 (304)
T 2jam_A 265 IDGN 268 (304)
T ss_dssp HHSS
T ss_pred ccCC
Confidence 8653
No 131
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7.3e-39 Score=362.69 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=208.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|++..+|+.||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 87 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYH-------- 87 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee--------
Confidence 478999999999999999999999999999999986543 2345678999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 135 (302)
T 2j7t_A 88 --------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135 (302)
T ss_dssp --------------------------------C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3457999999975 88888765 4669999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----CCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~s 613 (1196)
+|++||||||+|||++.++.+||+|||++....... .......||+.|+|||++. ....++
T Consensus 136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 200 (302)
T 2j7t_A 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL---------------QKRDSFIGTPYWMAPEVVMCETMKDTPYD 200 (302)
T ss_dssp TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH---------------HC-----CCGGGCCHHHHHHHHTTSTTTT
T ss_pred CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc---------------cccccccCChhhcCCeeeccccCCCCCCc
Confidence 999999999999999999999999999987542211 0113357999999999984 225689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++|||||||++|+|++ ||..........................+..+.+||.+||+.||.+|||+.++++|+|+.
T Consensus 201 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~ 280 (302)
T 2j7t_A 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280 (302)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTT
T ss_pred hhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHh
Confidence 99999999999999996 777665555444444333222233445677899999999999999999999999999998
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
....
T Consensus 281 ~~~~ 284 (302)
T 2j7t_A 281 SITS 284 (302)
T ss_dssp TCCC
T ss_pred hhcc
Confidence 8653
No 132
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-39 Score=388.97 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=202.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
..++|.+.+.||+|+||+||+|.++.+++.||||++...... ......+.+|+.+|+.++||||++++++|.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-- 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 457899999999999999999999999999999999754311 112235789999999999999999998762
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 211 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~ 251 (419)
T 3i6u_A 211 ---------------------------------------AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251 (419)
T ss_dssp ---------------------------------------SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 234689999996 5999999888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|+|||++.+
T Consensus 252 l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 315 (419)
T 3i6u_A 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLVS 315 (419)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------------------CTTCCTTTTC-
T ss_pred HHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc----------------cccccCCCCCccCceeeec
Confidence 9999999999999999999997654 59999999998653211 1234689999999999863
Q ss_pred --CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 609 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 609 --~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
...|+.++|||||||++|+|++ ||............+. ..... +..+...++.+.+||++||+.||.+|||+.
T Consensus 316 ~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 395 (419)
T 3i6u_A 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 395 (419)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHH
Confidence 2457889999999999999997 7764432222222222 12222 334556788999999999999999999999
Q ss_pred HHHhccCCCCchH
Q 000993 682 ELLQDALPPQMEY 694 (1196)
Q Consensus 682 eiL~~~~~~~~~~ 694 (1196)
++|+||||.....
T Consensus 396 e~l~hp~~~~~~~ 408 (419)
T 3i6u_A 396 EALRHPWLQDEDM 408 (419)
T ss_dssp HHHHSGGGCCHHH
T ss_pred HHhCCcccCChhH
Confidence 9999999987543
No 133
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.3e-39 Score=363.41 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=203.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~------ 81 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE------ 81 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE------
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee------
Confidence 345789999999999999999999999999999999875443 3345578999999999999999999998873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+| +|.+++....++++..++.++.||+.||+||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 127 (294)
T 4eqm_A 82 ----------------------------------EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127 (294)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 24578999999975 9999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+++....... ......+||+.|+|||++.+ ..++.+
T Consensus 128 H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 192 (294)
T 4eqm_A 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------TQTNHVLGTVQYFSPEQAKG-EATDEC 192 (294)
T ss_dssp HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------------------------CCSSCCHHHHHT-CCCCTT
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc--------------cccCccccCccccCHhHhcC-CCCCch
Confidence 999999999999999999999999999999986532210 11234579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||.................... ......++.+.++|.+||+.||.+||+..+.+.+
T Consensus 193 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 193 TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence 999999999999996 8877666555544443222111 1123466789999999999999999954444443
No 134
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.6e-39 Score=372.27 Aligned_cols=273 Identities=25% Similarity=0.406 Sum_probs=217.8
Q ss_pred CCCCCCCCCCC-CcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCe
Q 000993 366 DSGSPNMSLPS-SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHV 442 (1196)
Q Consensus 366 ~~~~~~~~~~~-~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnI 442 (1196)
+...+...... ..+.+.|.+. +.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.+ +||||
T Consensus 12 ~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i 91 (327)
T 3lm5_A 12 DLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91 (327)
T ss_dssp ----CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTB
T ss_pred cccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCE
Confidence 33344433333 3344567776 889999999999999999999999999986555555567899999999999 56999
Q ss_pred eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHH
Q 000993 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKE 519 (1196)
Q Consensus 443 V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~ 519 (1196)
++++++|.. ...+|+|||||.+ +|.+++... ..+++.
T Consensus 92 v~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 131 (327)
T 3lm5_A 92 INLHEVYEN----------------------------------------TSEIILILEYAAGGEIFSLCLPELAEMVSEN 131 (327)
T ss_dssp CCEEEEEEC----------------------------------------SSEEEEEEECCTTEEGGGGGSSCC-CCCCHH
T ss_pred EEEEEEEEe----------------------------------------CCeEEEEEEecCCCcHHHHHHHhcccCCCHH
Confidence 999988732 4568999999975 899888543 679999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
.++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||+++...... ......|
T Consensus 132 ~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~g 195 (327)
T 3lm5_A 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----------------ELREIMG 195 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------CC
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------ccccccC
Confidence 99999999999999999999999999999999988 7899999999998653211 1234579
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|+|||++.+ ..++.++|||||||++|+|++ ||...................+ +.+...++.+.+||.+||+.
T Consensus 196 t~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 274 (327)
T 3lm5_A 196 TPEYLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK 274 (327)
T ss_dssp CGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred CcCccCCeeecC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 8877666555554444333333 34456778999999999999
Q ss_pred CCCCCCCHHHHHhccCCCCchHH
Q 000993 673 SPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 673 dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
||.+|||++++|+|+|+++..++
T Consensus 275 dP~~Rpt~~~ll~h~~~~~~~~~ 297 (327)
T 3lm5_A 275 NPEKRPTAEICLSHSWLQQWDFE 297 (327)
T ss_dssp SGGGSCCHHHHTTCGGGCCCCTT
T ss_pred ChhhCcCHHHHhCCHhhcccccc
Confidence 99999999999999999987654
No 135
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=363.93 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=186.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------ 82 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC------
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc------
Confidence 45789999999999999999999999999999999964321 11224678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 128 (278)
T 3cok_A 83 ----------------------------------SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128 (278)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 4999998765 5799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.+
T Consensus 129 H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 192 (278)
T 3cok_A 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---------------EKHYTLCGTPNYISPEIATR-SAHGLE 192 (278)
T ss_dssp HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------------------------C
T ss_pred HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC---------------CcceeccCCCCcCCcchhcC-CCCCch
Confidence 99999999999999999999999999999997643211 01123578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||||||+++|||++ ||...................| ...++++.+||.+||+.||.+|||+.++++|+||.+.
T Consensus 193 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp THHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred hhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 999999999999996 7765433322222222121222 2356789999999999999999999999999999865
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 270 ~ 270 (278)
T 3cok_A 270 S 270 (278)
T ss_dssp -
T ss_pred C
Confidence 3
No 136
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3e-39 Score=382.67 Aligned_cols=256 Identities=27% Similarity=0.384 Sum_probs=200.8
Q ss_pred CCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHH-hcCCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS-RLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~-~L~HpnIV~l~~~~~e~~ 453 (1196)
....+++|.+. +.||+|+||+||+|.++.+|+.||||+++. ...+.+|+.++. ..+||||++++++|...
T Consensus 56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~- 127 (400)
T 1nxk_A 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 127 (400)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeec-
Confidence 34567889987 689999999999999999999999999862 135678888874 45899999999987321
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
.....++|+|||||+| +|.+++.... .+++.+++.++.||+.
T Consensus 128 -----------------------------------~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 172 (400)
T 1nxk_A 128 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172 (400)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 0124678999999974 9999998653 5999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.
T Consensus 173 aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------------------CTTCCGGGSC
T ss_pred HHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC----------------ccccCCCCCCccCHhhcC
Confidence 999999999999999999999998 7889999999997542111 124568999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHH----HHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQ----IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~----~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
+ ..|+.++|||||||++|||++ ||....... ...........++ +.+...++++.+||++||+.||.+|||
T Consensus 237 ~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 315 (400)
T 1nxk_A 237 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 315 (400)
T ss_dssp C-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred C-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC
Confidence 7 579999999999999999996 776443211 1112222222333 345667889999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000993 680 ATELLQDALPPQ 691 (1196)
Q Consensus 680 a~eiL~~~~~~~ 691 (1196)
+.++++|+|+.+
T Consensus 316 ~~eil~hp~~~~ 327 (400)
T 1nxk_A 316 ITEFMNHPWIMQ 327 (400)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHhcCccccC
Confidence 999999999864
No 137
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.7e-39 Score=381.04 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=205.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
...+|++.+.||+|+||+||+|++..+++ ||+|++...... ..+|+.+|+.++||||++++++|...+.
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~---- 106 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGD---- 106 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESS----
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCC----
Confidence 34689999999999999999999986665 888887543221 2369999999999999999999865321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....++|+|||||++++...+. ....+++..++.++.||+.||+|
T Consensus 107 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~ 156 (394)
T 4e7w_A 107 ------------------------------KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156 (394)
T ss_dssp ------------------------------SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 12346789999999987766554 35679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||++||+||||||+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+...|+
T Consensus 157 LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~ 220 (394)
T 4e7w_A 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----------------PNVSYICSRYYRAPELIFGATNYT 220 (394)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred HHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC----------------CCcccccCcCccCHHHHcCCCCCC
Confidence 9999999999999999999 78999999999998653211 123467899999999998766799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQES 664 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~~l~~ 664 (1196)
.++|||||||++|||++ ||...........+....+ .+|. . ....++++.+
T Consensus 221 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T 4e7w_A 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAID 300 (394)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHH
Confidence 99999999999999996 8876655444333322111 1110 0 1125678999
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||.+||+.||.+|||+.++++||||....
T Consensus 301 li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 301 LISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 99999999999999999999999998764
No 138
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.2e-39 Score=362.91 Aligned_cols=252 Identities=24% Similarity=0.469 Sum_probs=211.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 85 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD------ 85 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc------
Confidence 45899999999999999999999999999999999864321 11234678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||+++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 86 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 86 ----------------------------------RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 132 ~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (284)
T 2vgo_A 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----------------RRRTMCGTLDYLPPEMIEG-KTHDEKV 193 (284)
T ss_dssp TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------CBCCCCSCGGGCCHHHHTT-CCBCTTH
T ss_pred HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------ccccccCCCCcCCHHHhcc-CCCCccc
Confidence 999999999999999999999999999998653211 1234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||||+++|+|++ ||..................+|+ ..++.+.++|.+||+.||.+|||+.++++|+||..
T Consensus 194 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP---FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred chhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCC---cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 99999999999996 78766555544444433333333 35678999999999999999999999999998753
No 139
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.7e-39 Score=360.82 Aligned_cols=257 Identities=29% Similarity=0.531 Sum_probs=212.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 77 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-------
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-------
Confidence 5799999999999999999999999999999999987666666677899999999999999999999987532
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 78 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 126 (279)
T 2w5a_A 78 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126 (279)
T ss_dssp -------------------------------GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 24578999999975 999998653 349999999999999999999
Q ss_pred HHhCC-----CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 535 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 535 LHs~g-----IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+
T Consensus 127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~- 190 (279)
T 2w5a_A 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKTFVGTPYYMSPEQMNR- 190 (279)
T ss_dssp HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------HHHHHHHSCCTTCCHHHHHC-
T ss_pred HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------ccccccCCCccccChHHhcc-
Confidence 99999 9999999999999999999999999998653211 00123478999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++.++||||||+++|+|++ ||.............. ...+......++++.++|.+||+.||.+|||+.++++|
T Consensus 191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh--cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 568999999999999999996 7776555444333322 23333334567899999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+..-
T Consensus 269 ~~~~~~ 274 (279)
T 2w5a_A 269 PLILEH 274 (279)
T ss_dssp TTCCGG
T ss_pred hhhhhh
Confidence 988753
No 140
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=366.34 Aligned_cols=278 Identities=26% Similarity=0.378 Sum_probs=208.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.....++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence 344568999999999999999999999999999999998743 334567889999999999999999999987432110
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
. ............+|+||||++++|.+++.. +++++..++.++.||+.||+||
T Consensus 84 ~--------------------------~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 136 (320)
T 2i6l_A 84 L--------------------------TDDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYI 136 (320)
T ss_dssp C--------------------------CC----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred c--------------------------ccccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHH
Confidence 0 000011123567899999999999998864 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|++||+||||||+|||++ .++.+||+|||+++........ ........+|+.|+|||++.+...++.
T Consensus 137 H~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 204 (320)
T 2i6l_A 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH------------KGHLSEGLVTKWYRSPRLLLSPNNYTK 204 (320)
T ss_dssp HHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------------------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred HhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc------------ccccccccccccccCcHHhcCcccCCc
Confidence 999999999999999997 5679999999999865321100 011234568999999999876567899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------C-----CccccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P-----PSWVAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p-----~~~~~~~~~l~~ 664 (1196)
++|||||||++|||++ ||......+............ + ..+...++++.+
T Consensus 205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence 9999999999999996 787655444333222211100 0 012346778999
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
||++||+.||.+|||+.++++|+||.....
T Consensus 285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred HHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 999999999999999999999999876543
No 141
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.1e-39 Score=376.05 Aligned_cols=256 Identities=24% Similarity=0.386 Sum_probs=209.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||+|++... ........+.+|+.+++.++||||++++++|..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 102 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 102 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--------
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--------
Confidence 47899999999999999999999999999999999754 344556789999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+.
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 150 (360)
T 3eqc_A 103 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150 (360)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 9999999888999999999999999999999996
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
||+||||||+|||++.++++||+|||+++...... .....||+.|+|||++.+ ..++.++|
T Consensus 151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~D 212 (360)
T 3eqc_A 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 212 (360)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---------------------CCCCTTCCHHHHTT-CCCSHHHH
T ss_pred CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-----------------ccCCCCCCCeECHHHHcC-CCCCchhh
Confidence 99999999999999999999999999997653221 234579999999999988 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHH-----------------------------------------HhhhcCCCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLS-----------------------------------------DLKQKGELPP 653 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~-----------------------------------------~l~~~~~~p~ 653 (1196)
||||||++|+|++ ||........... ..........
T Consensus 213 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
T 3eqc_A 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292 (360)
T ss_dssp HHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCC
Confidence 9999999999996 7765433222110 0111111111
Q ss_pred ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 654 ~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.....++++.+||++||+.||.+|||+.++|+|+||.+...
T Consensus 293 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred CcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 12235678999999999999999999999999999876543
No 142
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.6e-39 Score=360.35 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=203.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|.+.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST------ 82 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec------
Confidence 45899999999999999999999999999999999874321 12234578899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 83 ----------------------------------PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++....... ......||+.|+|||++.+....+.++
T Consensus 129 ~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 192 (276)
T 2h6d_A 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGPEV 192 (276)
T ss_dssp HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------------------------CCTGGGTTSCCCHHHH
T ss_pred HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc----------------ceecccCCccccCHHHHcCCCCCCccc
Confidence 9999999999999999999999999999997643211 112347899999999998844457899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||+++|+|++ ||...................| ...++.+.++|.+||+.||.+|||+.++++|+||.+.
T Consensus 193 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 193 DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc---hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 99999999999996 7776554444333332222222 2346789999999999999999999999999998653
No 143
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-38 Score=364.72 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=209.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecC
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~-~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~ 453 (1196)
+..++|++.+.||+|+||.||+|++. .+|+.||||+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34578999999999999999999995 6789999999975443322223466777777766 8999999999874210
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~g 531 (1196)
......+|+||||++++|.+++.... .+++..++.++.||+.|
T Consensus 88 -----------------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~ 132 (326)
T 1blx_A 88 -----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132 (326)
T ss_dssp -----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence 01346789999999999999997654 49999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..
T Consensus 133 l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~ 195 (326)
T 1blx_A 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SS 195 (326)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CC
T ss_pred HHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC----------------CccccccccceeCHHHHhc-CC
Confidence 999999999999999999999999999999999997643211 1234578999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC------------------------CCccccCCHHHHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQES 664 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~~l~~ 664 (1196)
++.++|||||||++|+|++ ||................+.. ...+...++.+.+
T Consensus 196 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 1blx_A 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275 (326)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHH
Confidence 8999999999999999996 787655544433333211100 0112345678899
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||.+||+.||.+|||+.++++|+||....
T Consensus 276 li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 276 LLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp HHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 99999999999999999999999998764
No 144
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.8e-39 Score=377.91 Aligned_cols=257 Identities=21% Similarity=0.314 Sum_probs=203.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--------CCCeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--------HQHVVRYYQA 448 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--------HpnIV~l~~~ 448 (1196)
..+.++|++.+.||+|+||+||+|++..+++.||||+++. .......+.+|+.+|+.++ ||||++++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 3445789999999999999999999999999999999863 2344567889999999995 7889999998
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 526 (1196)
|...+ .....+|+|||||+++|.+.+... ..+++..++.++.
T Consensus 110 ~~~~~------------------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 110 FKISG------------------------------------VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153 (397)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred eeecC------------------------------------CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHH
Confidence 74321 134678999999999888877654 4699999999999
Q ss_pred HHHHHHHHHHhC-CCcccCCCcCcEEecCCC-------------------------------------------------
Q 000993 527 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN------------------------------------------------- 556 (1196)
Q Consensus 527 qIa~gL~yLHs~-gIiHrDLKp~NILld~~~------------------------------------------------- 556 (1196)
||+.||+|||++ ||+||||||+|||++.++
T Consensus 154 qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 1wak_A 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL 233 (397)
T ss_dssp HHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred HHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence 999999999998 999999999999999775
Q ss_pred CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCc
Q 000993 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFS 633 (1196)
Q Consensus 557 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~ 633 (1196)
.+||+|||+++..... ....+||+.|+|||++.+ ..++.++|||||||+||||++ ||.
T Consensus 234 ~~kl~DfG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 234 KVKIADLGNACWVHKH------------------FTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CEEECCGGGCEETTBC------------------SCSCCSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEecccccccccccc------------------CccCCCCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 7999999999764311 234579999999999998 569999999999999999997 775
Q ss_pred hhH------HHHHHHHHhhhcCCCCCc---------------------------------------cccCCHHHHHHHHH
Q 000993 634 TAM------ERQIVLSDLKQKGELPPS---------------------------------------WVAKFSEQESLLRR 668 (1196)
Q Consensus 634 ~~~------~~~~~~~~l~~~~~~p~~---------------------------------------~~~~~~~l~~LI~~ 668 (1196)
... ............+..|.. ....++.+.+||.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 374 (397)
T 1wak_A 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374 (397)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGG
T ss_pred CCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHH
Confidence 322 111111111111111110 01123467899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCC
Q 000993 669 LMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||+.||.+|||+.++|+||||.+
T Consensus 375 ~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 375 MLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhccChhhcCCHHHHhhCccccC
Confidence 99999999999999999999863
No 145
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-39 Score=374.69 Aligned_cols=265 Identities=24% Similarity=0.364 Sum_probs=200.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++.+.||+|+||.||+|+++.+|+.||||++...... .....+++..++.++||||++++++|...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-- 93 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-- 93 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS--
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccc--
Confidence 34578999999999999999999999999999999998643322 2356778888999999999999999865321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL 532 (1196)
......++|+|||||+++|.+.+. ....+++..++.++.||+.||
T Consensus 94 -------------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al 142 (360)
T 3e3p_A 94 -------------------------------RDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142 (360)
T ss_dssp -------------------------------SCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 012345689999999998776554 456799999999999999999
Q ss_pred HHHH--hCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIH--GQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLH--s~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||| ++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 143 ~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 206 (360)
T 3e3p_A 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----------------PNVAYICSRYYRAPELIFGN 206 (360)
T ss_dssp HHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS----------------CCCSTTSCGGGCCHHHHTTC
T ss_pred HHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC----------------CcccccCCcceeCHHHHcCC
Confidence 9999 999999999999999997 8999999999998653211 12345789999999999775
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-----------------------------Ccccc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----------------------------PSWVA 657 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-----------------------------~~~~~ 657 (1196)
..++.++|||||||++|||++ ||................+..+ .....
T Consensus 207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T 3e3p_A 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK 286 (360)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence 668999999999999999996 8876655544443332111110 11111
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred ccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 346889999999999999999999999999998754
No 146
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.5e-39 Score=370.14 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=215.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 112 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED---- 112 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 3445789999999999999999999999999999999975432 33455678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|
T Consensus 113 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (335)
T 2owb_A 113 ------------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQY 156 (335)
T ss_dssp ------------------------------------SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999999888899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.
T Consensus 157 LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 220 (335)
T 2owb_A 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSF 220 (335)
T ss_dssp HHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHHT-SCBCT
T ss_pred HHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---------------ccccccCCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999998643211 01234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|+|++ ||......+...........++. ..++.+.+||++||+.||.+|||+.++++|+||..
T Consensus 221 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999996 77765555544444333333333 45678999999999999999999999999998764
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 298 ~ 298 (335)
T 2owb_A 298 G 298 (335)
T ss_dssp S
T ss_pred C
Confidence 3
No 147
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.3e-39 Score=360.96 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=213.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 86 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence 345789999999999999999999999999999999976532 33455678899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 131 (294)
T 2rku_A 87 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131 (294)
T ss_dssp -----------------------------------SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999997 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 132 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 195 (294)
T 2rku_A 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 195 (294)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHTT-SCBCTH
T ss_pred HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---------------cccccccCCCCcCCcchhcc-CCCCch
Confidence 99999999999999999999999999999997643211 01233579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+||||||+++|+|++ ||......+............|. ..++.+.++|++||+.||.+|||+.++++|+||..
T Consensus 196 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc---ccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 999999999999997 77766555544444333333332 45678999999999999999999999999998754
No 148
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.1e-40 Score=389.06 Aligned_cols=271 Identities=15% Similarity=0.140 Sum_probs=199.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHH---HHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREV---ATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev---~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+ ..|+.++|||||++++.|.....
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~-- 150 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD-- 150 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE--
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh--
Confidence 68999999999999999999999899999999998543 2334567889999 55555689999999965532100
Q ss_pred cCCCCcCCCCccccccccccccc-ccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCH-------HHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAAS-SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-------ELAWHLFRQI 528 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-------~~~~~i~~qI 528 (1196)
.+...... ................|++||||+|+|.+++.....+++ ..++.++.||
T Consensus 151 ---------------~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi 215 (377)
T 3byv_A 151 ---------------LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQV 215 (377)
T ss_dssp ---------------EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHH
T ss_pred ---------------hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHH
Confidence 00000000 000000000011124799999999999999987655555 7888899999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||++||+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+
T Consensus 216 ~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~g-~~y~aPE~~~~ 276 (377)
T 3byv_A 216 IRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------RVVSSVS-RGFEPPELEAR 276 (377)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC------------------EEECCCC-TTCCCHHHHHH
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC------------------cccCCCC-cCccChhhhcc
Confidence 9999999999999999999999999999999999999975321 1234567 99999999987
Q ss_pred C----------CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 609 W----------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 609 ~----------~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
. ..|+.++|||||||+||||++ ||........... ....+...++++.+||.+||+.||.
T Consensus 277 ~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dp~ 349 (377)
T 3byv_A 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW-------IFRSCKNIPQPVRALLEGFLRYPKE 349 (377)
T ss_dssp HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG-------GGSSCCCCCHHHHHHHHHHTCSSGG
T ss_pred cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh-------hhhhccCCCHHHHHHHHHHcCCCch
Confidence 3 168999999999999999997 7754432221111 1112245677999999999999999
Q ss_pred CCCCHHHHHhccCCCCchH
Q 000993 676 DRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 676 ~RPta~eiL~~~~~~~~~~ 694 (1196)
+|||+.++++|+||.++..
T Consensus 350 ~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 350 DRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp GCCCHHHHHTSHHHHHHHH
T ss_pred hCCCHHHHhhChHHHHHHH
Confidence 9999999999999976543
No 149
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-38 Score=371.64 Aligned_cols=261 Identities=22% Similarity=0.333 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---------chhHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---------LPVNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... ....+.+.+|+.+++.++||||++++++|.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 478999999999999999999986 5999999998653322 122467999999999999999999999885
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa 529 (1196)
... ......+|+|||||+++|.+.+... ..+++..++.++.||+
T Consensus 100 ~~~-----------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 144 (362)
T 3pg1_A 100 HFE-----------------------------------EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL 144 (362)
T ss_dssp ECC-----------------------------------TTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred ecc-----------------------------------CCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 421 0124578999999999999888754 3699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 145 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~ 208 (362)
T 3pg1_A 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA----------------NKTHYVTHRWYRAPELVMQF 208 (362)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-------------------------------CGGGCCHHHHTTC
T ss_pred HHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc----------------ccceecccceecCcHHhcCC
Confidence 99999999999999999999999999999999999997532211 12345799999999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CC-----Ccccc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVA 657 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~ 657 (1196)
..++.++|||||||++|+|++ ||................+. .+ .....
T Consensus 209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (362)
T 3pg1_A 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288 (362)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTT
T ss_pred CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCC
Confidence 678999999999999999996 88765544333322211110 01 01123
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++.+.+||.+||+.||.+|||+.++++||||...
T Consensus 289 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 46789999999999999999999999999999876
No 150
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1e-38 Score=366.28 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=204.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEE-ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC------eeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAWF 450 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~-~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn------IV~l~~~~~ 450 (1196)
...++|++.+.||+|+||.||+|.+ +.+|+.||||+++. .......+.+|+.+++.++|+| |++++++|.
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 3457999999999999999999998 56889999999863 2344567889999999997665 888888773
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI 528 (1196)
. ...+|+|||||+++|.+++.... .+++..++.++.||
T Consensus 88 ~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi 127 (339)
T 1z57_A 88 H----------------------------------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQI 127 (339)
T ss_dssp E----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 2 35789999999889999998765 68999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecC-------------------CCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDA-------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~-------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
+.||+|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus 128 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------ 189 (339)
T 1z57_A 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE------------------ 189 (339)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS------------------
T ss_pred HHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc------------------
Confidence 99999999999999999999999987 66899999999975321
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-----------
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW----------- 655 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~----------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............|..+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 268 (339)
T 1z57_A 190 HHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH 268 (339)
T ss_dssp CCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred ccccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence 1234579999999999987 568999999999999999996 7765544433222211112222110
Q ss_pred ------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 656 ------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 656 ------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
...++.+.+||.+||+.||.+|||+.++++|+||....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 01134678999999999999999999999999998764
No 151
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.8e-38 Score=364.40 Aligned_cols=254 Identities=20% Similarity=0.334 Sum_probs=202.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+|+.+++.++ ||||+++++++.+.
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 103 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 103 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccC-----
Confidence 357899999999999999999999999999999998632 2467899999999997 99999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....++|||||+ ++|.+++.. +++..++.++.||+.||+|||
T Consensus 104 ---------------------------------~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 104 ---------------------------------VSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp ---------------------------------TTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHH
Confidence 1346799999997 588888753 899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.+...++.+
T Consensus 148 ~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 211 (330)
T 3nsz_A 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 211 (330)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC----------------ccccccccccccChhhhcCCCcCCch
Confidence 99999999999999999777 89999999997643211 12345789999999999876679999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH-HHHHHH------------hh-hcCCCC---------------------Ccccc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER-QIVLSD------------LK-QKGELP---------------------PSWVA 657 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~-~~~~~~------------l~-~~~~~p---------------------~~~~~ 657 (1196)
+|||||||++|||++ ||...... ...... +. .....+ .....
T Consensus 212 ~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (330)
T 3nsz_A 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 291 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG
T ss_pred hhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc
Confidence 999999999999996 77432111 111000 00 000111 11222
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.++++.+||++||+.||.+|||++++|+||||.++..
T Consensus 292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 5789999999999999999999999999999998754
No 152
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-39 Score=374.06 Aligned_cols=262 Identities=27% Similarity=0.420 Sum_probs=209.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
.+++|++.+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.+ +||||+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 130 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 130 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-
Confidence 3579999999999999999999994 4899999999864321 112234567899999999 79999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 131 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a 171 (355)
T 1vzo_A 131 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171 (355)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 356899999997 5999999988899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-C
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-P 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~ 610 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+. .
T Consensus 172 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~ 237 (355)
T 1vzo_A 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 237 (355)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC--------------CcccCcccCcCccChhhhcCCCC
Confidence 9999999999999999999999999999999999986532211 112345799999999999862 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----- 678 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----- 678 (1196)
.++.++|||||||+||||++ ||.... ............ ++.....++.+.+||.+||..||.+||
T Consensus 238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 314 (355)
T 1vzo_A 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314 (355)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC---CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence 47899999999999999997 775322 122222222222 223345567899999999999999999
Q ss_pred CHHHHHhccCCCCchHHHH
Q 000993 679 SATELLQDALPPQMEYELL 697 (1196)
Q Consensus 679 ta~eiL~~~~~~~~~~~~~ 697 (1196)
++.++++|+||....+..+
T Consensus 315 s~~ell~h~~f~~~~~~~l 333 (355)
T 1vzo_A 315 DADEIKEHLFFQKINWDDL 333 (355)
T ss_dssp THHHHHTSGGGTTCCHHHH
T ss_pred CHHHHHcCcchhcCChhHh
Confidence 9999999999999876644
No 153
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=360.01 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=205.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.++||||+++++++..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 95 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFK------- 95 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEe-------
Confidence 34789999999999999999999999999999999975432 3568899999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||++ +|.+++. ....+++..++.++.||+.||.|||
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 96 ---------------------------------NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3467999999975 9999987 4567999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++
T Consensus 143 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 206 (314)
T 3com_A 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNCVA 206 (314)
T ss_dssp HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---------------SCBCCCCSCGGGCCHHHHSS-SCBCTTH
T ss_pred hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---------------cccCccCCCCCccChhhcCC-CCCCccc
Confidence 9999999999999999999999999999997643211 11234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||+++|+|++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+....
T Consensus 207 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 99999999999996 776655444333322222222222344567899999999999999999999999999987654
No 154
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=380.46 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=188.7
Q ss_pred CCceE-EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEE-LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~-~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+.|++ .++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+|+.++|||||+++++|...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 90 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----- 90 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEET-----
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecC-----
Confidence 45665 357999999999999977 5688999999864332 24678999999999999999999988542
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQI 528 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI 528 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||
T Consensus 91 ---------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 137 (405)
T 3rgf_A 91 ---------------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137 (405)
T ss_dssp ---------------------------------TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHH
T ss_pred ---------------------------------CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHH
Confidence 24578999999999999888532 249999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
+.||+|||++||+||||||+|||+ +.++.+||+|||+|+........ .......+||+.|+|||
T Consensus 138 ~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE 205 (405)
T 3rgf_A 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPE 205 (405)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------CCCTTCCHH
T ss_pred HHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc------------cccCCCceecCcccCch
Confidence 999999999999999999999999 67789999999999865422100 11234568999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHhhhcCCCC-Cccc---------------
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGELP-PSWV--------------- 656 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l~~~~~~p-~~~~--------------- 656 (1196)
++.+...++.++|||||||+||||++ ||...... .....+....+..+ ..|.
T Consensus 206 ~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 285 (405)
T 3rgf_A 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285 (405)
T ss_dssp HHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHC
T ss_pred hhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhc
Confidence 99885669999999999999999996 77533221 11111111111110 1111
Q ss_pred -------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 657 -------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 657 -------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..++.+.+||++||+.||.+|||++++|+||||....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 286 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred cccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1145788999999999999999999999999998653
No 155
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.5e-38 Score=373.88 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=204.4
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCC-----eeeeeeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH-----VVRYYQAW 449 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-Hpn-----IV~l~~~~ 449 (1196)
...+.++|++.+.||+|+||+||+|+++.+++.||||+++. .......+.+|+.+++.++ |+| |++++++|
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 45567899999999999999999999999999999999863 2334567788999998885 554 88888777
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQ 527 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~q 527 (1196)
.. ...+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 126 ~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 165 (382)
T 2vx3_A 126 MF----------------------------------------RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165 (382)
T ss_dssp EE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred cc----------------------------------------CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHH
Confidence 32 3578999999999999999765 46999999999999
Q ss_pred HHHHHHHHH--hCCCcccCCCcCcEEec--CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 528 IVEGLAHIH--GQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 528 Ia~gL~yLH--s~gIiHrDLKp~NILld--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
|+.||+||| +.||+||||||+|||++ .++.+||+|||+|+.... .....+||+.|+||
T Consensus 166 i~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~------------------~~~~~~~t~~y~aP 227 (382)
T 2vx3_A 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ------------------RIYQYIQSRFYRSP 227 (382)
T ss_dssp HHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCH
T ss_pred HHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc------------------ccccccCCccccCh
Confidence 999999999 46999999999999995 467899999999976421 12345799999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc------------------------
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV------------------------ 656 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~------------------------ 656 (1196)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..|..+.
T Consensus 228 E~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (382)
T 2vx3_A 228 EVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTK 306 (382)
T ss_dssp HHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCC
T ss_pred HHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccccc
Confidence 99998 569999999999999999997 88766555444333322111110000
Q ss_pred -------------------------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 657 -------------------------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 657 -------------------------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
...+++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 307 DGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred ccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 0013678999999999999999999999999998754
No 156
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.1e-39 Score=370.20 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=205.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcCCCCeeeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFE 451 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e 451 (1196)
...++|++.+.||+|+||.||+|+++.+++.||||++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 3457899999999999999999999999999999998654321 1123458899999999999999999988621
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
..+|+|||||++ +|.+++.....+++..++.++.||+.
T Consensus 87 -----------------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~ 125 (322)
T 2ycf_A 87 -----------------------------------------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125 (322)
T ss_dssp -----------------------------------------SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHH
T ss_pred -----------------------------------------CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 126999999975 99999988889999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.
T Consensus 126 ~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------HHHHHHSCCTTCCHHHHH
T ss_pred HHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------ccccccCCcCccCchhhc
Confidence 999999999999999999999987664 9999999997643211 112347899999999974
Q ss_pred --CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 608 --GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 608 --~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
+...++.++|||||||++|+|++ ||............+. ..... +..+...++.+.+||++||+.||.+|||+
T Consensus 190 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp HTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCH
Confidence 23568999999999999999996 7764432211111121 12222 22345677899999999999999999999
Q ss_pred HHHHhccCCCCchH
Q 000993 681 TELLQDALPPQMEY 694 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~ 694 (1196)
.++++|+|+.....
T Consensus 270 ~~~l~h~~~~~~~~ 283 (322)
T 2ycf_A 270 EEALRHPWLQDEDM 283 (322)
T ss_dssp HHHHTSGGGCCHHH
T ss_pred HHHhhCcCcCCHHH
Confidence 99999999987643
No 157
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-38 Score=358.85 Aligned_cols=259 Identities=29% Similarity=0.526 Sum_probs=215.4
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+.++|++.+.||+|+||.||+|+++.+++.||||++............+.+|+.+++.++||||+++++++.+
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED---- 92 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC----
Confidence 4556789999999999999999999999999999999997655444456789999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 93 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 136 (287)
T 2wei_A 93 ------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136 (287)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356799999996 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+||+++.+ +.+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 137 LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~--~ 198 (287)
T 2wei_A 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG--T 198 (287)
T ss_dssp HHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------SCSCHHHHHTTCCHHHHTT--C
T ss_pred HHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------ccccccCcccccChHHhcC--C
Confidence 999999999999999999764 469999999998643211 1233468999999999986 4
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++||||||+++|+|++ ||...................+ +.+...++++.++|++||+.||.+|||+.++++|+
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 8999999999999999996 7776655544433333222222 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
||.+.
T Consensus 279 ~~~~~ 283 (287)
T 2wei_A 279 WIQKY 283 (287)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87643
No 158
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=364.15 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=204.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|++..+++ .||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 121 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--- 121 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG---
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 345789999999999999999999986555 5999998743 344456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L 164 (325)
T 3kul_A 122 -------------------------------------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164 (325)
T ss_dssp -------------------------------------GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 345799999996 5999999754 5799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 165 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~-~~~ 231 (325)
T 3kul_A 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD------------AAYTTTGGKIPIRWTAPEAIAF-RTF 231 (325)
T ss_dssp HHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----------------CCEECC---CCGGGSCHHHHHH-CEE
T ss_pred HHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc------------ceeeccCCCCcccccCHhHhcC-CCC
Confidence 999999999999999999999999999999999986532210 0112234567889999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE--GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc--CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999986 7766655554433322 23333445667899999999999999999999999864
No 159
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-39 Score=382.30 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=192.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc--CCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L--~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|.+.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++..++...
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~---- 137 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS---- 137 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCC----
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee----
Confidence 469999999999999999999999999999999987554 233455677885555444 6999998764442100
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHH------HHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELA------WHLFRQIVE 530 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~------~~i~~qIa~ 530 (1196)
+.....+. .................+|+|||||+++|.+++...+ .+.+... +.++.||+.
T Consensus 138 --d~~~~~~~----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~ 205 (371)
T 3q60_A 138 --DAVAVQSQ----------PPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIR 205 (371)
T ss_dssp --EEEEETTS----------CSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hheecCCC----------CCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH
Confidence 00000000 0000000000011235689999999999999997643 3444445 577799999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 609 (1196)
||+|||++||+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+.
T Consensus 206 aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~ 267 (371)
T 3q60_A 206 LAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR------------------GPASSVPVTYAPREFLNAST 267 (371)
T ss_dssp HHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE------------------EEGGGSCGGGCCHHHHTCSE
T ss_pred HHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC------------------ccCccCCcCCcChhhccCCC
Confidence 999999999999999999999999999999999999864311 1134677999999999751
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH-----Hhh-hcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS-----DLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~-----~l~-~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..++.++|||||||+||||++ ||........... ... ......+.+...++.+.+||.+||+.||.+|||+
T Consensus 268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 347 (371)
T 3q60_A 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347 (371)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence 358999999999999999997 7765432110000 000 0011122334667899999999999999999999
Q ss_pred HHHHhccCCCCchHHH
Q 000993 681 TELLQDALPPQMEYEL 696 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~~~ 696 (1196)
.++++||||.+..+..
T Consensus 348 ~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 348 LEAMETPEFLQLQNEI 363 (371)
T ss_dssp HHHTTSHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 9999999998776553
No 160
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=363.04 Aligned_cols=254 Identities=22% Similarity=0.366 Sum_probs=200.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.-++|.+.+.||+|+||+||+|++..+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 79 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecC------
Confidence 34689999999999999999999999999999999874332 22356788999999999999999999887432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~ 127 (319)
T 4euu_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (319)
T ss_dssp --------------------------------TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 699999976543 9999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--
Q 000993 535 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 608 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 608 (1196)
||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++..
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (319)
T 4euu_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (319)
T ss_dssp HHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHHT
T ss_pred HHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----------------ceeecccCCCccCHHHhhhcc
Confidence 999999999999999999 777889999999998653221 1234579999999999862
Q ss_pred -----CCCCCCcchhHHHHHHHHHhhc---CCch----hHHHHHHHHHhhhcCC-------------------CCC---c
Q 000993 609 -----WPKIDEKADMYSLGIVFFELWH---PFST----AMERQIVLSDLKQKGE-------------------LPP---S 654 (1196)
Q Consensus 609 -----~~~~s~ksDVwSlGviLyELlt---Pf~~----~~~~~~~~~~l~~~~~-------------------~p~---~ 654 (1196)
...++.++|||||||++|||++ ||.. ....+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
T 4euu_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (319)
T ss_dssp SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccccc
Confidence 2568999999999999999996 7752 2223333333332211 111 0
Q ss_pred cccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 655 ~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.....+.+.+||++||+.||.+|||++++|+|+
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred chhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 011224678999999999999999999999986
No 161
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=365.85 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||+||+|.+..+++.||+|++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 78 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------- 78 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec--------
Confidence 4789999999999999999999999999999998853 344566789999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 79 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (310)
T 3s95_A 79 --------------------------------DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126 (310)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 499999987 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++............. .............+||+.|+|||++.+ ..++.++|
T Consensus 127 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 204 (310)
T 3s95_A 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR-SLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVD 204 (310)
T ss_dssp TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------------------CCCCSCGGGCCHHHHTT-CCCCTHHH
T ss_pred CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc-cccccccccccccCCCcceeCHHHhcC-CCCCcHHH
Confidence 9999999999999999999999999999987543321110000 000000111235689999999999988 67899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHH----HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQI----VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~----~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||........ ...... ....+ ...++.+.++|.+||+.||.+|||+.++++
T Consensus 205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL-DRYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH-HHTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc-cccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999996 4433211000 000000 01112 234457899999999999999999999986
No 162
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-38 Score=369.78 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ........+.+|+.+++.+ +|||||+++++|.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC-
Confidence 47899999999999999999994 456789999999743 3344556799999999999 899999999988432
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC-----------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------- 515 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------- 515 (1196)
...+|+|||||++ +|.+++.....
T Consensus 99 --------------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (359)
T 3vhe_A 99 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD 140 (359)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccc
Confidence 2346899999975 99999976533
Q ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 516 -------------------------------------------------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 516 -------------------------------------------------l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
+++..++.++.||+.||+|||++||+|||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik 220 (359)
T 3vhe_A 141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 220 (359)
T ss_dssp -------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred cccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 221 p~NIll~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ 286 (359)
T 3vhe_A 221 ARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 286 (359)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTSCT-------------TCEEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH
T ss_pred hhhEEEcCCCcEEEEeccceeeecccc-------------cchhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHHH
Confidence 999999999999999999998643211 0112344578999999999987 57899999999999999
Q ss_pred Hhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 627 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 627 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||++ ||............+.. ...++.....++++.++|.+||+.||.+|||+.++++|
T Consensus 287 ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 287 EIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCccchhHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9996 77655433333333332 22233334567899999999999999999999999987
No 163
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.6e-38 Score=356.82 Aligned_cols=252 Identities=29% Similarity=0.447 Sum_probs=210.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|++++.||+|+||.||+|++..+++.||||++..... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 91 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------- 91 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--------
Confidence 4679999999999999999999999999999999976543 2346789999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 92 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~ 138 (303)
T 3a7i_A 92 --------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE 138 (303)
T ss_dssp --------------------------------TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3468999999975 89988864 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus 139 ~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 202 (303)
T 3a7i_A 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADI 202 (303)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHH
T ss_pred CCccCCCChheEEECCCCCEEEeecccceecCccc---------------cccCccCCCcCccCHHHHhc-CCCCchhhh
Confidence 99999999999999999999999999997653221 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 203 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 203 WSLGITAIELARGEPPHSELHPMKVLFLIPK--NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCcCHHHHHHHhhc--CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 999999999996 7766554443333222 2233333456778999999999999999999999999998743
No 164
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.2e-39 Score=363.42 Aligned_cols=267 Identities=24% Similarity=0.373 Sum_probs=187.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 84 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVV----- 84 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEES-----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----
Confidence 3445899999999999999999999998999999998865432 2335678899999999999999999998743
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--------cCCCCHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--------YDHFDKELAWHLFRQ 527 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--------~~~l~e~~~~~i~~q 527 (1196)
...+|+||||++ ++|.+++.. ...+++..++.++.|
T Consensus 85 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~q 129 (303)
T 2vwi_A 85 -----------------------------------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129 (303)
T ss_dssp -----------------------------------SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHH
T ss_pred -----------------------------------cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHH
Confidence 345799999996 599998864 356999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++||+||||||+||+++.++.+||+|||+++......... .........||+.|+|||++.
T Consensus 130 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~ 199 (303)
T 2vwi_A 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT----------RNKVRKTFVGTPCWMAPEVME 199 (303)
T ss_dssp HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------CCCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc----------chhhhcccCCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998654221000 001123457999999999987
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-------CCccccCCHHHHHHHHHcccCCCCCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------PPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-------p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
+...++.++|||||||++|||++ ||................... +......++++.+||.+||+.||.+|
T Consensus 200 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 279 (303)
T 2vwi_A 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279 (303)
T ss_dssp HHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence 53458999999999999999996 776554443333332221111 11223456789999999999999999
Q ss_pred CCHHHHHhccCCCCchH
Q 000993 678 PSATELLQDALPPQMEY 694 (1196)
Q Consensus 678 Pta~eiL~~~~~~~~~~ 694 (1196)
||+.++++|+||.+...
T Consensus 280 ps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 280 PTAAELLRHKFFQKAKN 296 (303)
T ss_dssp CCHHHHHTSTTC-----
T ss_pred cCHHHHhhChhhhcCCC
Confidence 99999999999987643
No 165
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=360.07 Aligned_cols=262 Identities=21% Similarity=0.388 Sum_probs=205.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+|+.+++.+ +||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~---- 95 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP---- 95 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-----
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC----
Confidence 5789999999999999999999999999999999975432 245788999999999 89999999999854310
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
......+|+|||||++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 96 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l 145 (326)
T 2x7f_A 96 ------------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145 (326)
T ss_dssp -------------------------------CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 0114578999999975 999999764 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPK 611 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~ 611 (1196)
|++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ...
T Consensus 146 H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 210 (326)
T 2x7f_A 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDAT 210 (326)
T ss_dssp HHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----------------------------CCGGGCCHHHHC--------
T ss_pred HHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc---------------cccccccCCccccChhhhccccccCcC
Confidence 99999999999999999999999999999997653211 01234579999999999863 245
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||++|+|++ ||.............. ...........++.+.+||.+||..||.+|||+.++++|+|
T Consensus 211 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 211 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-CccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 8999999999999999996 7766555444333322 22222223445679999999999999999999999999999
Q ss_pred CCCchH
Q 000993 689 PPQMEY 694 (1196)
Q Consensus 689 ~~~~~~ 694 (1196)
|.....
T Consensus 290 ~~~~~~ 295 (326)
T 2x7f_A 290 IRDQPN 295 (326)
T ss_dssp HHCCTT
T ss_pred HhhCcc
Confidence 877643
No 166
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.3e-38 Score=364.73 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=205.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC------eeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAW 449 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn------IV~l~~~~ 449 (1196)
....++|++.+.||+|+||+||+|++..++ +.||||+++. .......+.+|+.+++.++|+| ++.+++++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 91 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF 91 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee
Confidence 345689999999999999999999998777 6899999863 2344567889999999998766 77777665
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQ 527 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~q 527 (1196)
. ....+|+|||||+++|.+.+.... .+++.+++.++.|
T Consensus 92 ~----------------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~q 131 (355)
T 2eu9_A 92 N----------------------------------------FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131 (355)
T ss_dssp E----------------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred e----------------------------------------eCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHH
Confidence 2 235789999999999888887653 6999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEe-------------------cCCCCeEEeccCcchhccccccccCCCCCCCCCCcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFF-------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 588 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILl-------------------d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 588 (1196)
|+.||+|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 132 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----------------- 194 (355)
T 2eu9_A 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE----------------- 194 (355)
T ss_dssp HHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----------------
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc-----------------
Confidence 9999999999999999999999999 5678999999999975321
Q ss_pred ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc----------
Q 000993 589 VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------- 655 (1196)
Q Consensus 589 ~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 195 -~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 272 (355)
T 2eu9_A 195 -HHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 272 (355)
T ss_dssp -CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGE
T ss_pred -cccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhh
Confidence 1234579999999999987 568999999999999999996 7876554443332222222222111
Q ss_pred -------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 656 -------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 656 -------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
...++++.+||++||+.||.+|||+.++++|+||.+...+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 343 (355)
T 2eu9_A 273 YKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343 (355)
T ss_dssp ETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred cccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence 0112467899999999999999999999999999987654
No 167
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.6e-38 Score=356.32 Aligned_cols=254 Identities=27% Similarity=0.391 Sum_probs=199.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++++.||+|+||+||+|+ +..+++.||||++.. ......+.+.+|+.+++.++||||++++++|...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 83 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 83 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH--
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 34789999999999999999999 456899999999863 3344557899999999999999999999987432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 84 ------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 127 (295)
T 3ugc_A 84 ------------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127 (295)
T ss_dssp ------------------------------------HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 1345799999996 59999997654 599999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 128 ~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 194 (295)
T 3ugc_A 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF------------FKVKEPGESPIFWYAPESLTE-SKF 194 (295)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------------------CTTCGGGGCCHHHHHH-CCC
T ss_pred HHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce------------eeeccCCCCccceeCcHHhcC-CCC
Confidence 9999999999999999999999999999999999875422110 011233467889999999988 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
+.++|||||||++|||++ ||....... .....+. ....++.....++++.+||++||+.||
T Consensus 195 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp 273 (295)
T 3ugc_A 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNV 273 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred ChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-ccCcCCCCcCcCHHHHHHHHHHcCCCh
Confidence 999999999999999997 444322110 1112222 233334445667899999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 274 ~~Rps~~el~~~ 285 (295)
T 3ugc_A 274 NQRPSFRDLALR 285 (295)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCCCHHHHHHH
Confidence 999999999864
No 168
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=100.00 E-value=1e-40 Score=400.37 Aligned_cols=372 Identities=10% Similarity=0.019 Sum_probs=269.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC--CcccccceEEEeecCCceEeecC---CC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH---EL 809 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP---D~ 809 (1196)
+.++|++||+|.+++++++|++.+++.|.++||++|.||+| ++... ++.+.++||+|.|++|+.++||| |+
T Consensus 54 ~~~~G~~d~lP~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~~d~~~~~~~LrPt~ee~ 133 (458)
T 2i4l_A 54 QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEM 133 (458)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEEEECSCCHHH
T ss_pred ccCCcceEECCCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEEEeCCCCeEEECCCChHH
Confidence 45799999999999999999999999999999999999999 22222 34678999999999999999999 99
Q ss_pred cHHHHHHHHh-CCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchHHHHHH---HHHHHHHcCCCCc
Q 000993 810 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEAEVLKV---TMDIVTRFFHAES 881 (1196)
Q Consensus 810 T~~iaR~~a~-~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L~~lgi~~~ 881 (1196)
|++++|..+. ++..|+|+||+|+|||+| +|+.+ .+||+|+|+|+||.++..+|+|++.+ +.++|+.||++
T Consensus 134 t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~~~~ad~e~~~~~~~~~~i~~~lGl~-- 211 (458)
T 2i4l_A 134 ITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLK-- 211 (458)
T ss_dssp HHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 9999998766 346799999999999999 78754 56799999999999888999998755 99999999995
Q ss_pred eEEEeCcHHHHHHHHHHc-----CCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIWSWA-----GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~l-----gl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
+.+.+|+++.+.+.+... ...++.. ..+......+ .. . ++ ..+.+ .+..++
T Consensus 212 ~~~~~~~~g~~gg~~s~e~~~l~~~ged~i-~~~~~~~~~n-~~------~----------~~-~~~~~----~l~~~l- 267 (458)
T 2i4l_A 212 AIPMRAETGPIGGDLSHEFIVLAETGESGV-YIDRDVLNLP-VP------D----------EN-VDYDG----DLTPII- 267 (458)
T ss_dssp EEEEECCCCSSCSSCEEEEEEECTTCSEEE-EEEGGGGGCC-CC------C----------TT-CCTTS----CCHHHH-
T ss_pred eEEEEccccccCCccchhhhhhhhcCcceE-EecccccccC-HH------H----------Hh-ccccH----hHHHHH-
Confidence 999999987654433210 1110000 0000000000 00 0 00 00000 000111
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1036 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~ 1036 (1196)
+.+..+...++.. .+.+ ..+ + ..+.+|++++||++ ||.+|++ +.. .+++.
T Consensus 268 ----------~~~~~~~~~~~~~--~~g~-~~~--~--~~~~~~l~~~rgl~--~G~iFel---g~~--------~s~~~ 317 (458)
T 2i4l_A 268 ----------KQWTSVYAATEDV--HEPA-RYE--S--EVPEANRLNTRGIE--VGQIFYF---GTK--------YSDSM 317 (458)
T ss_dssp ----------HHHHHSCEEETTT--CCTT-HHH--H--HSCTTTEEEEEEEE--EEEEEEE---ETH--------HHHHT
T ss_pred ----------hcCchhhhcChhh--cccc-ccc--C--CCCCcCceeeeeec--cCcEEEe---ccc--------ccccC
Confidence 1110000000000 0000 000 0 13456889999999 9999998 222 37999
Q ss_pred ccccchhhhhccccccccccCCCCCCC--cceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchHHH
Q 000993 1037 GGRYDYLLHRMWDREYVGYASRTNPPS--GVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVE 1106 (1196)
Q Consensus 1037 GGRYD~L~~~fg~~~~~~~~g~~~~~p--AvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~ 1106 (1196)
||||++. +|. ..| ++||+||+|||+.+|.+ +...+...+|.+|+|++.+ ++....+
T Consensus 318 g~ry~~~---~G~-----------~~p~~~~gfgiGveRli~al~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~~~~~~~ 383 (458)
T 2i4l_A 318 KANVTGP---DGT-----------DAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 383 (458)
T ss_dssp TCEEECT---TSC-----------EEECEEEEEEEEHHHHHHHHHHHSEETTEECCCTTTCSCSEEEEESSTTCHHHHHH
T ss_pred CcEEECC---CCC-----------EeceEEeeecccHHHHHHHHHHhhccccCCcCCcccCCceEEEEecCCCCHHHHHH
Confidence 9999875 221 235 88999999999988642 2222223357789999874 2456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
|.+++++||++|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.|
T Consensus 384 a~~l~~~Lr~~Gi~v~~D~~-~~~~g~k~~~ad~~g~p~~iivG~~e~~~g~v~vr~r~~~~~~~v~~~~l~~~l 457 (458)
T 2i4l_A 384 CDQLYRELSAKGVDVLYDDT-DQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARL 457 (458)
T ss_dssp HHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHTCSEEEEECHHHHTTTEEEEEETTTCCEEEEETTTTTCC-
T ss_pred HHHHHHHHhhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECCchhhCCEEEEEECCCCcEEEEeHHHHHHhh
Confidence 99999999999999998876 579999999999999999999999999999999999999999999999987654
No 169
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=360.30 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=208.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|++.+.||+|+||.||+|.+..+++.||+|+++.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 78 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---- 78 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Confidence 45789999999999999999999999999999999975321 123456799999999999999999999987431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+++|.+++.. ...+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 79 ----------------------------------EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp -------------------------------------CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHH
Confidence 2346799999999888888865 4569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~s 613 (1196)
||++||+||||||+|||++.++.+||+|||++........ ........||+.|+|||++.+.. .++
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 191 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-------------DDTCRTSQGSPAFQPPEIANGLDTFSG 191 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-------------SCEECCCCSCGGGCCHHHHTCCSCEES
T ss_pred HHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-------------ccccccCCCCCCCcChhhccCcccCCc
Confidence 9999999999999999999999999999999976432110 01123457999999999998632 247
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++|||||||++|||++ ||...................+ ...++.+.+||++||+.||.+|||+.++++|+|+.
T Consensus 192 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC---CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 79999999999999996 8876555444433333222222 34567899999999999999999999999999886
Q ss_pred Cc
Q 000993 691 QM 692 (1196)
Q Consensus 691 ~~ 692 (1196)
..
T Consensus 269 ~~ 270 (305)
T 2wtk_C 269 KK 270 (305)
T ss_dssp SC
T ss_pred cC
Confidence 54
No 170
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.9e-38 Score=369.23 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 478999999999999999999985 34568999998643 3334567899999999999 89999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ |+|.+++....
T Consensus 159 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 198 (370)
T 2psq_A 159 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198 (370)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCC
T ss_pred ----------------------------------------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccc
Confidence 345799999997 59999997643
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 265 (370)
T 2psq_A 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 265 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-------------TCTTTTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-------------eecccCC
Confidence 478999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+.... +. ....++.....++++.+||.+||
T Consensus 266 ~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 342 (370)
T 2psq_A 266 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 342 (370)
T ss_dssp TSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTSCHHHHHHHHHHT
T ss_pred CcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 68899999999987 569999999999999999986 6765443333322 22 22333344456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 343 ~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 343 HAVPSQRPTFKQLVED 358 (370)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
No 171
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-38 Score=369.23 Aligned_cols=265 Identities=22% Similarity=0.413 Sum_probs=213.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc---------------hhHHHHHHHHHHHHhcCCCC
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---------------PVNDRILREVATLSRLQHQH 441 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~---------------~~~~~~~~Ev~iL~~L~Hpn 441 (1196)
..+.++|++.+.||+|+||.||+|++ +|+.||||++....... .....+.+|+.+++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 44568999999999999999999999 89999999997532111 11267999999999999999
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHH------Hhh--
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV------FES-- 512 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~------l~~-- 512 (1196)
|+++++++.+ ...+|+|||||++ +|.++ +..
T Consensus 105 i~~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 144 (348)
T 2pml_X 105 CLTCEGIITN----------------------------------------YDEVYIIYEYMENDSILKFDEYFFVLDKNY 144 (348)
T ss_dssp BCCCSEEEES----------------------------------------SSEEEEEEECCTTCBSSEESSSEESSCSSS
T ss_pred cceEEEEEee----------------------------------------CCeEEEEEeccCCCcHHHHHHHhhhhhhcc
Confidence 9999998732 3568999999975 99988 655
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 513 YDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 513 ~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----------------~~ 207 (348)
T 2pml_X 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----------------KI 207 (348)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------EE
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------cc
Confidence 5679999999999999999999999 99999999999999999999999999999764321 12
Q ss_pred cCccccccCCCchhccCCCCCCC-cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCc------------
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDE-KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS------------ 654 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~-ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~------------ 654 (1196)
....||+.|+|||++.+...++. ++|||||||++|||++ ||..... .+............|..
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 287 (348)
T 2pml_X 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287 (348)
T ss_dssp CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc
Confidence 34579999999999988545666 9999999999999996 7776544 33333332222223311
Q ss_pred ----cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHHHHH
Q 000993 655 ----WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 700 (1196)
Q Consensus 655 ----~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~~~~ 700 (1196)
....++++.+||++||+.||.+|||+.++++|+||.......+...
T Consensus 288 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~~ 337 (348)
T 2pml_X 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337 (348)
T ss_dssp ------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHHH
T ss_pred cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHHH
Confidence 1446778999999999999999999999999999999876655443
No 172
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=370.16 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||+||+|++ ..+++.||||+++. ........++.+|+.+++.++|||||++++++.+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 47899999999999999999994 45678999999863 3344555678999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 526 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 526 (1196)
....|+|||||+ |+|.+++.... .+++..++.++.
T Consensus 146 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 188 (367)
T 3l9p_A 146 -------------------------------------SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188 (367)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHH
T ss_pred -------------------------------------CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHH
Confidence 234589999996 59999997643 489999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.++ .+||+|||+|+........ .......||+.|+||
T Consensus 189 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-------------~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-------------RKGGCAMLPVKWMPP 255 (367)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC-------------TTCCGGGSCGGGCCH
T ss_pred HHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccccc-------------ccCCCcCCcccEECH
Confidence 999999999999999999999999999655 4999999999865432211 112345789999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|||++ ||......+....... ...++.....++.+.+||.+||+.||.+|||
T Consensus 256 E~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 332 (367)
T 3l9p_A 256 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332 (367)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHcCCCHhHCcC
Confidence 99987 569999999999999999985 7766655544433332 2223333456778999999999999999999
Q ss_pred HHHHHhcc
Q 000993 680 ATELLQDA 687 (1196)
Q Consensus 680 a~eiL~~~ 687 (1196)
+.+++++.
T Consensus 333 ~~eil~~l 340 (367)
T 3l9p_A 333 FAIILERI 340 (367)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 173
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.9e-38 Score=359.32 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++.+.||+|+||.||+|.+. +++.||||++............+.+|+.+++.++ ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 99 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 99 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC------
T ss_pred cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec------
Confidence 357999999999999999999986 6899999999876666666778999999999997 5999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++||+++++|.+++.....+++..++.++.||+.||+|||+
T Consensus 100 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~ 145 (313)
T 3cek_A 100 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145 (313)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3468999998788999999988899999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--------
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-------- 609 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------- 609 (1196)
+||+||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++.+.
T Consensus 146 ~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 211 (313)
T 3cek_A 146 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211 (313)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------CCGGGCCHHHHTTCC-------
T ss_pred CCceecCCCcccEEEE-CCeEEEeeccccccccCccc-------------cccccCCCCCCCcCCHHHHhhccccccccc
Confidence 9999999999999996 48999999999986532210 0112345799999999998752
Q ss_pred --CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 610 --PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 610 --~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++.++|||||||++|||++ ||..........................++++.+||++||+.||.+|||+.+++
T Consensus 212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 291 (313)
T 3cek_A 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291 (313)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHh
Confidence 357889999999999999996 776543332222222222222222233457899999999999999999999999
Q ss_pred hccCCCCch
Q 000993 685 QDALPPQME 693 (1196)
Q Consensus 685 ~~~~~~~~~ 693 (1196)
+|+|+....
T Consensus 292 ~h~~~~~~~ 300 (313)
T 3cek_A 292 AHPYVQIQT 300 (313)
T ss_dssp TSHHHHCC-
T ss_pred cCccccCCC
Confidence 999987643
No 174
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.6e-38 Score=348.40 Aligned_cols=245 Identities=22% Similarity=0.380 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|++. +++.||+|++...... .+++.+|+.+++.++||||+++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 76 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 76 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS---------
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEec---------
Confidence 68999999999999999999997 6788999999754332 4678999999999999999999998732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 77 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 125 (269)
T 4hcu_A 77 -------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125 (269)
T ss_dssp -------------------------------SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence 345799999997 5899999654 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++||
T Consensus 126 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 190 (269)
T 4hcu_A 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 190 (269)
T ss_dssp TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CeecCCcchheEEEcCCCCEEecccccccccccccc--------------ccccCcccccccCCHHHhcC-CCCCchhhh
Confidence 999999999999999999999999999986543221 11234467889999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|+|++ ||......+........ ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 191 ~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC--ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999986 77765555444433322 2222333457789999999999999999999999986
No 175
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=357.85 Aligned_cols=257 Identities=24% Similarity=0.391 Sum_probs=191.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||.||+|+++.+|+.||||++..........+.+.++..+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------- 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------- 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--------
Confidence 579999999999999999999999999999999998654433333445555567888899999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++.+..+... ...+++..++.++.||+.||+|||++
T Consensus 96 --------------------------------~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (318)
T 2dyl_A 96 --------------------------------NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143 (318)
T ss_dssp --------------------------------SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 346899999997666666654 56799999999999999999999995
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ...++
T Consensus 144 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 207 (318)
T 2dyl_A 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----------------AKDRSAGCAAYMAPERIDPPDPTKPDYD 207 (318)
T ss_dssp HCCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------CCTTCCHHHHC--------CC
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc----------------cccccCCCccccChhhcccccccccCCc
Confidence 99999999999999999999999999997643211 1123479999999999852 24588
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++|||||||++|||++ ||..... ...............+.....++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 208 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (318)
T 2dyl_A 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287 (318)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred cccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence 99999999999999996 7765332 2333333333333333344567899999999999999999999999999998
Q ss_pred CCc
Q 000993 690 PQM 692 (1196)
Q Consensus 690 ~~~ 692 (1196)
.+.
T Consensus 288 ~~~ 290 (318)
T 2dyl_A 288 KRY 290 (318)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
No 176
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=353.01 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.....||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 90 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------- 90 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEE--------
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--------
Confidence 355666678999999999999999999999999987543 2345678999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l 138 (295)
T 2clq_A 91 --------------------------------NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138 (295)
T ss_dssp --------------------------------TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH
Confidence 346799999996 59999987652 467899999999999999999
Q ss_pred HhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
|++||+||||||+||+++. ++.+||+|||+++...... .......||+.|+|||++.+. ..++
T Consensus 139 H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (295)
T 2clq_A 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEIIDKGPRGYG 203 (295)
T ss_dssp HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------------------CCCCCCGGGCCHHHHHHGGGGCS
T ss_pred HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC---------------CcccccCCCccccChhhhcCCCCCCC
Confidence 9999999999999999987 8999999999997643211 012345799999999998753 2378
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++||||||+++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+|+.
T Consensus 204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 99999999999999996 776543322222221112223333345678999999999999999999999999999998
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
...
T Consensus 284 ~~~ 286 (295)
T 2clq_A 284 VSS 286 (295)
T ss_dssp C--
T ss_pred hcc
Confidence 653
No 177
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.9e-38 Score=347.80 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=202.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.++ ++..||+|+++..... ...+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSK-------- 74 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 478999999999999999999887 6778999999754332 4578999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 122 (268)
T 3sxs_A 75 --------------------------------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122 (268)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999997654 59999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (268)
T 3sxs_A 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--------------YVSSVGTKFPVKWSAPEVFHY-FKYSSKSD 187 (268)
T ss_dssp TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--------------EEECCSCCCCGGGCCHHHHHH-SEEETTHH
T ss_pred CCeecCCcCcceEEECCCCCEEEccCccceecchhh--------------hhcccCCCcCcccCCHHHHhc-cCCchhhh
Confidence 999999999999999999999999999998643221 111234567889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||................ .+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH--RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC--CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999996 777666555544443322 222223456789999999999999999999999986
No 178
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.1e-38 Score=360.59 Aligned_cols=266 Identities=18% Similarity=0.249 Sum_probs=187.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|++..++. .||||+++.........+.+.+|+.+++.++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA-- 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc--
Confidence 3689999999999999999999887765 89999997655455567789999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC------CCCHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------HFDKELAWHLFRQIV 529 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------~l~e~~~~~i~~qIa 529 (1196)
.......|++||||.+ +|.+++.... .+++..++.++.||+
T Consensus 100 --------------------------------~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (323)
T 3qup_A 100 --------------------------------KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147 (323)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHH
Confidence 0112345899999975 9999886432 599999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+
T Consensus 148 ~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 213 (323)
T 3qup_A 148 CGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-------------YRQGCASKLPVKWLALESLAD- 213 (323)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCGGGCCHHHHHH-
T ss_pred HHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc-------------ccccccccCcccccCchhhcC-
Confidence 999999999999999999999999999999999999986533211 111234467889999999988
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ 679 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------ 679 (1196)
..++.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||
T Consensus 214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG--GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc--CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 568999999999999999986 6765544444333322 2233334456789999999999999999999
Q ss_pred -HHHHHhccCCCCchHH
Q 000993 680 -ATELLQDALPPQMEYE 695 (1196)
Q Consensus 680 -a~eiL~~~~~~~~~~~ 695 (1196)
++++++|+|+.....+
T Consensus 292 ~l~~~l~~~~~~~~~~~ 308 (323)
T 3qup_A 292 ELENILGHLSVLSTSQD 308 (323)
T ss_dssp HHHHHHHC---------
T ss_pred HHHHHHHHhhhcCCCCC
Confidence 5555667766655433
No 179
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.4e-38 Score=362.04 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
-++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~------- 76 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPC------- 76 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEE-------
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEec-------
Confidence 46899999999999999999999999999999998754332 3578899999999 99999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+|||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 123 (330)
T 2izr_A 77 ---------------------------------GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123 (330)
T ss_dssp ---------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999998899999986 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+||+||||||+|||++.++. +||+|||+++.+......... ........+||+.|+|||++.+ ..+
T Consensus 124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~ 194 (330)
T 2izr_A 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI--------PYREHKSLTGTARYMSINTHLG-KEQ 194 (330)
T ss_dssp TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CCC
T ss_pred CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc--------cccccCCcCCCccccChHHHcC-CCC
Confidence 99999999999999998887 999999999865432211100 0112345689999999999998 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhH---HHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~---~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||.... ..+............+. ......+++.++|.+||+.||.+||++.+|++
T Consensus 195 ~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 195 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999999999996 886532 22222222111112221 22233458999999999999999999999986
No 180
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.4e-38 Score=356.26 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=200.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|++. ..+|+|+++.........+.+.+|+.+++.++||||+++++++.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------- 102 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--------- 102 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc---------
Confidence 478999999999999999999875 35899998876666666778999999999999999999998752
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+++|||||. ++|.+++. ....+++.+++.++.||+.||+|||+
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 150 (307)
T 3lb7_A 103 --------------------------------KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp --------------------------------SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123689999997 59999987 45679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~k 615 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.. ...++.+
T Consensus 151 ~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 217 (307)
T 3lb7_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc-------------cccccCCCCCcceECcceeeccCCCCCCch
Confidence 9999999999999999999999999999975432110 011234579999999999862 2458899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
+|||||||++|||++ ||...................| ..+...++.+.+||.+||+.||.+||++.+++++.
T Consensus 218 ~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l 295 (307)
T 3lb7_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHH
Confidence 999999999999996 8876555444443333222222 23345678999999999999999999999999863
No 181
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-38 Score=360.08 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 478999999999999999999997 35589999998743 334456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-------------------- 513 (1196)
...+|+|||||++ +|.+++...
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T 1luf_A 122 -------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164 (343)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC------------------
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccc
Confidence 3456999999974 999999763
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 514 ----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 514 ----~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .
T Consensus 165 ~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------~ 231 (343)
T 1luf_A 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------K 231 (343)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc-------------c
Confidence 56999999999999999999999999999999999999999999999999999876432210 1
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+|
T Consensus 232 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l 308 (343)
T 1luf_A 232 ADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNL 308 (343)
T ss_dssp ----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh--CCCcCCCCCCCCHHHHHH
Confidence 1234568999999999987 568999999999999999996 777665554443332 233333334567799999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++||+.||.+|||+.+++++
T Consensus 309 i~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 309 MRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcccCcccCCCHHHHHHH
Confidence 999999999999999999875
No 182
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-37 Score=346.56 Aligned_cols=248 Identities=19% Similarity=0.243 Sum_probs=206.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|++. |+.||||++..........+.+.+|+.+++.++||||++++++|.+.
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 79 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP----- 79 (271)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----
T ss_pred CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----
Confidence 34579999999999999999999985 89999999987666666677899999999999999999999987431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 80 ---------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 126 (271)
T 3kmu_A 80 ---------------------------------PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126 (271)
T ss_dssp ---------------------------------TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 1245799999997 59999998765 48999999999999999999
Q ss_pred HHhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--
Q 000993 535 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-- 610 (1196)
Q Consensus 535 LHs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 610 (1196)
||++| |+||||||+|||++.++.++|+|||++... ......||+.|+|||++.+..
T Consensus 127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~--------------------~~~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF--------------------QSPGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT--------------------SCTTCBSCGGGSCHHHHHSCGGG
T ss_pred HhcCCCceecCCCccceEEEcCCcceeEEeccceeee--------------------cccCccCCccccChhhhccCCCC
Confidence 99999 999999999999999999999999887532 123457899999999998732
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............. ....+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 187 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 13338999999999999996 8876665555444433 333344445677899999999999999999999999864
No 183
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-37 Score=349.03 Aligned_cols=255 Identities=18% Similarity=0.211 Sum_probs=202.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~------- 76 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQ------- 76 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEE-------
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecC-------
Confidence 34789999999999999999999999999999999874432 23477899999999 8999999998763
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....|+||||++++|.+++...+ .+++..++.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH 123 (298)
T 1csn_A 77 ---------------------------------EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123 (298)
T ss_dssp ---------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 245679999999889999998654 5999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
++||+||||||+|||++.++. +||+|||+++............ ........||+.|+|||++.+ ..
T Consensus 124 ~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~ 194 (298)
T 1csn_A 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP--------YREKKNLSGTARYMSINTHLG-RE 194 (298)
T ss_dssp TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCC--------CCCCCCCCSCTTTCCHHHHTT-CC
T ss_pred hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccccc--------ccCccCCCCCcccCCchhhcC-CC
Confidence 999999999999999988776 9999999998764332111000 012345689999999999988 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhH---HHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~---~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
++.++|||||||++|||++ ||.... ............ ...+......++++.+||.+||+.||.+|||+.++
T Consensus 195 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l 274 (298)
T 1csn_A 195 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYL 274 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence 8999999999999999997 776521 222222111111 11112223567799999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 275 ~~~ 277 (298)
T 1csn_A 275 QGL 277 (298)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 184
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-37 Score=348.43 Aligned_cols=246 Identities=20% Similarity=0.355 Sum_probs=200.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|.+. ++..||||++...... .+++.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 90 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK-------- 90 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEec--------
Confidence 478999999999999999999887 7788999999754332 4678999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 138 (283)
T 3gen_A 91 --------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138 (283)
T ss_dssp --------------------------------SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 599999976 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|
T Consensus 139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 203 (283)
T 3gen_A 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--------------SSVGSKFPVRWSPPEVLMY-SKFSSKSD 203 (283)
T ss_dssp TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH--------------STTSTTSCGGGCCHHHHHH-CCCSHHHH
T ss_pred CCccCCCCccceEEEcCCCCEEEccccccccccccccc--------------cccCCccCcccCCHHHhcc-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||............... ..+......++.+.+||.+||+.||.+|||+.+++++
T Consensus 204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG--LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc--cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999986 77766555444433322 2222233456789999999999999999999999986
No 185
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.9e-38 Score=366.73 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----------CCCeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQA 448 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----------HpnIV~l~~~ 448 (1196)
.++|++.+.||+|+||+||+|++..+|+.||||++.. .......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 4689999999999999999999999999999999863 3334567889999999886 8999999998
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 526 (1196)
+...+ .....++++|||++++|.+++... ..+++..++.++.
T Consensus 95 ~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 95 FNHKG------------------------------------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138 (373)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred hhccC------------------------------------CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHH
Confidence 75421 123478999999988999999764 4599999999999
Q ss_pred HHHHHHHHHHhC-CCcccCCCcCcEEecC------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 527 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDA------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 527 qIa~gL~yLHs~-gIiHrDLKp~NILld~------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
||+.||+|||++ ||+||||||+|||++. .+.+||+|||+++..... .....||+.
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~~t~~ 200 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------YTNSIQTRE 200 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------------------CCSCCSCGG
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------------------CCCCCCCcc
Confidence 999999999998 9999999999999953 347999999999764311 234578999
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHH------HHHHHHHhhhcCCCCCc----------------
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAME------RQIVLSDLKQKGELPPS---------------- 654 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~------~~~~~~~l~~~~~~p~~---------------- 654 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||..... ...........+..|+.
T Consensus 201 y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 279 (373)
T 1q8y_A 201 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279 (373)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcc
Confidence 999999988 568999999999999999997 7764331 11111111111111110
Q ss_pred -----------------------cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 655 -----------------------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 655 -----------------------~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
....++++.+||++||+.||.+|||+.++|+|+||.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 01223577899999999999999999999999999875
No 186
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.7e-38 Score=370.20 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=203.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+++.||||+++.. ........+.+|+.+|+.++||||+++++++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 183 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------- 183 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--------
Confidence 36899999999999999999999999999999998643 333445578899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 184 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 231 (377)
T 3cbl_A 184 --------------------------------KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231 (377)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234699999996 69999997654 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+ ..++.++|
T Consensus 232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 297 (377)
T 3cbl_A 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY-------------AASGGLRQVPVKWTAPEALNY-GRYSSESD 297 (377)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE-------------ECCSSCCEEEGGGSCHHHHHH-CEEEHHHH
T ss_pred CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce-------------eecCCCCCCCcCcCCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999975422110 011122356788999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||......+.... +. ....++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 298 vwslG~il~el~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 298 VWSFGILLWETFSLGASPYPNLSNQQTREF-VE-KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999996 7766555443322 22 223333334567799999999999999999999999864
No 187
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-37 Score=350.81 Aligned_cols=254 Identities=24% Similarity=0.397 Sum_probs=200.2
Q ss_pred cCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|++.+.||+|+||.||+|+ +..+++.||||++.... .......+.+|+.+++.++||||++++++|.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 95 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 3569999999999999999999 46689999999987543 223456789999999999999999999988432
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||++ +|.+++.. ...+++..++.++.||+.||+
T Consensus 96 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 96 -----------------------------------GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp -------------------------------------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 13457999999964 99999954 457999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 207 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE------------YYTVKDDRDSPVFWYAPECLMQ-SKFY 207 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC------------EEECCCCTTCCGGGCCHHHHHH-CEEE
T ss_pred HhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc------------ceeccCCCCCCccccCCeeecC-CCCC
Confidence 99999999999999999999999999999999986532210 0112234578999999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc---CC--------------chhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PF--------------STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf--------------~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
.++|||||||++|+|++ |+ ............+. .....+.....++.+.+||++||+.||.+
T Consensus 208 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 286 (302)
T 4e5w_A 208 IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPCPPNCPDEVYQLMRKCWEFQPSN 286 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999997 32 22222222233332 22333344566789999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.++++.
T Consensus 287 Rps~~~ll~~ 296 (302)
T 4e5w_A 287 RTSFQNLIEG 296 (302)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999864
No 188
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.9e-38 Score=353.61 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
.++|.+.+.||+|+||.||+|+++.++ ..||+|++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-
Confidence 478999999999999999999998877 47999998643 23455789999999999999999999998732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC-CCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qIa~ 530 (1196)
....|+|||||+ ++|.+++..... +++..++.++.||+.
T Consensus 84 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 124 (289)
T 4fvq_A 84 ---------------------------------------GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124 (289)
T ss_dssp ---------------------------------------TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 234589999997 599999987654 999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCC--------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
||+|||++||+||||||+|||++.++. +||+|||+++..... ....||+.|+|
T Consensus 125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------~~~~~~~~y~a 185 (289)
T 4fvq_A 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------------------DILQERIPWVP 185 (289)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------------------HHHHHTTTTSC
T ss_pred HHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------------------cccCCcCcccC
Confidence 999999999999999999999999887 999999998754211 23468899999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
||++.+...++.++|||||||++|||++ |+...................+.. .++++.+||++||+.||.+|||
T Consensus 186 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCC
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcC
Confidence 9999874568999999999999999997 333333333333333333333333 3457889999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.+++++
T Consensus 263 ~~~ll~~ 269 (289)
T 4fvq_A 263 FRAIIRD 269 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 189
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.5e-38 Score=361.09 Aligned_cols=257 Identities=25% Similarity=0.377 Sum_probs=185.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|.++.+|+.||||+++... ......++.+|+. +++.++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~------- 92 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR------- 92 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------
Confidence 478999999999999999999999999999999997543 2334455666666 6777899999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|+|||||+++|.+++.. ...+++..++.++.||+.||.
T Consensus 93 ---------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~ 139 (327)
T 3aln_A 93 ---------------------------------EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139 (327)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHH
Confidence 346799999999998888763 567999999999999999999
Q ss_pred HHHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC---C
Q 000993 534 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---W 609 (1196)
Q Consensus 534 yLHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~ 609 (1196)
|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.. .
T Consensus 140 ~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~ 203 (327)
T 3aln_A 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSASR 203 (327)
T ss_dssp HHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------------------
T ss_pred HHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc----------------ccccCCCCccccCceeeccccCc
Confidence 99999 99999999999999999999999999997653211 1123479999999999842 2
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--CCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--ELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
..++.++|||||||++|+|++ ||................. .++ ......++.+.+||++||+.||.+|||+.++
T Consensus 204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 283 (327)
T 3aln_A 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283 (327)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 458999999999999999997 7765433222111111111 111 1223467899999999999999999999999
Q ss_pred HhccCCCCch
Q 000993 684 LQDALPPQME 693 (1196)
Q Consensus 684 L~~~~~~~~~ 693 (1196)
++|+|+....
T Consensus 284 l~hp~~~~~~ 293 (327)
T 3aln_A 284 LKHPFILMYE 293 (327)
T ss_dssp TTSHHHHHHH
T ss_pred HhChHHHHhH
Confidence 9999986543
No 190
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-37 Score=353.15 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=196.6
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+..+++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--- 105 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--- 105 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee---
Confidence 45567899999999999999999999999999999999875432 23345778999999999999999999988733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+
T Consensus 106 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 148 (309)
T 2h34_A 106 -------------------------------------DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALD 148 (309)
T ss_dssp -------------------------------------TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+ ..++
T Consensus 149 ~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~ 213 (309)
T 2h34_A 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL--------------TQLGNTVGTLYYMAPERFSE-SHAT 213 (309)
T ss_dssp HHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------------------------CCGGGCCGGGTCC-----
T ss_pred HHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc--------------ccccccCCCcCccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999976532210 11234579999999999987 5789
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCC-CHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP-SATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RP-ta~eiL~~ 686 (1196)
.++||||||+++|||++ ||........ ...+......+ ......++.+.++|.+||+.||.+|| +++++++.
T Consensus 214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~ 290 (309)
T 2h34_A 214 YRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290 (309)
T ss_dssp CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence 99999999999999996 8876554432 22222222222 12334567899999999999999999 88888753
No 191
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-37 Score=363.12 Aligned_cols=261 Identities=17% Similarity=0.281 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchh---------HHHHHHHHHHHHhcCCCCeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPV---------NDRILREVATLSRLQHQHVVRY 445 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~---------~~~~~~Ev~iL~~L~HpnIV~l 445 (1196)
.++|++.+.||+|+||.||+|.++.+ ++.||||++......... ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 35899999999999999999999764 578999998754311000 0124456667778899999999
Q ss_pred eeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHH
Q 000993 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHL 524 (1196)
Q Consensus 446 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i 524 (1196)
++++.... ....++|+|||||+++|.+++... ..+++..++.+
T Consensus 114 ~~~~~~~~------------------------------------~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i 157 (364)
T 3op5_A 114 WGSGLHDK------------------------------------NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157 (364)
T ss_dssp EEEEEEEE------------------------------------TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHH
T ss_pred Eeeeeecc------------------------------------CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHH
Confidence 99985421 123578999999977999999876 67999999999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEec--CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
+.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+.+.......... .......+||+.|+|
T Consensus 158 ~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYA--------ADPKRCHDGTIEFTS 229 (364)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSS--------CCSSCCCCCCTTTCC
T ss_pred HHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccc--------cCcccccCCCCCccC
Confidence 99999999999999999999999999999 88999999999998765332111100 111244579999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCc------cccCCHHHHHHHHHccc
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPS------WVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~------~~~~~~~l~~LI~~cL~ 671 (1196)
||++.+ ..++.++|||||||+||||++ ||............... ...++.. ....++++.++|..||+
T Consensus 230 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 308 (364)
T 3op5_A 230 IDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKL 308 (364)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHT
T ss_pred HHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhc
Confidence 999988 568999999999999999997 88753322211111110 0011000 13456789999999999
Q ss_pred CCCCCCCCHHHHHh
Q 000993 672 PSPSDRPSATELLQ 685 (1196)
Q Consensus 672 ~dP~~RPta~eiL~ 685 (1196)
.||.+||++.++++
T Consensus 309 ~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 309 LDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTCCCCHHHHHH
T ss_pred CCCCCCCCHHHHHH
Confidence 99999999999986
No 192
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-37 Score=350.19 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=191.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.+..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 46899999999999999999999754 457999987643 33445677999999999999999999998762
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||++ +|.+++.... .+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 131 (281)
T 1mp8_A 87 -----------------------------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131 (281)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1235899999975 9999997654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 132 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 196 (281)
T 1mp8_A 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------YKASKGKLPIKWMAPESINF-RRFTS 196 (281)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSH
T ss_pred HHhCCeecccccHHHEEECCCCCEEECccccccccCcccc--------------cccccCCCcccccChhhccc-CCCCC
Confidence 9999999999999999999999999999999986532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||............. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999985 776554443333222 223333445667899999999999999999999999875
No 193
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=357.32 Aligned_cols=253 Identities=27% Similarity=0.370 Sum_probs=197.9
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhc----CCCCeeeeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRL----QHQHVVRYYQ 447 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L----~HpnIV~l~~ 447 (1196)
...+.++|++.+.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.+ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3456788999999999999999999999999999999987543221 1223466799999999 8999999998
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeee-cC-CCHHHHHhhcCCCCHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CP-RTLRQVFESYDHFDKELAWHLF 525 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy-~~-gsL~~~l~~~~~l~e~~~~~i~ 525 (1196)
++.. ....++|||| +. ++|.+++.....+++..++.++
T Consensus 106 ~~~~----------------------------------------~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~ 145 (312)
T 2iwi_A 106 WFET----------------------------------------QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145 (312)
T ss_dssp EC---------------------------------------------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred EEec----------------------------------------CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence 8732 3456899999 55 5999999988889999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
.||+.||+|||++||+||||||+||+++ .++.+||+|||+++..... ......||+.|+|||
T Consensus 146 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-----------------PYTDFDGTRVYSPPE 208 (312)
T ss_dssp HHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSS-----------------CBCCCCSCTTTSCHH
T ss_pred HHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccC-----------------cccccCCcccccCce
Confidence 9999999999999999999999999999 7899999999999764321 123456999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
++.+...++.++|||||||++|||++ ||..... .......++ ...++.+.+||.+||+.||.+|||+.
T Consensus 209 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ 279 (312)
T 2iwi_A 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP---AHVSPDCCALIRRCLAPKPSSRPSLE 279 (312)
T ss_dssp HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred eeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccCCc---ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 98874444568999999999999997 7755432 111122222 34567899999999999999999999
Q ss_pred HHHhccCCCCchH
Q 000993 682 ELLQDALPPQMEY 694 (1196)
Q Consensus 682 eiL~~~~~~~~~~ 694 (1196)
++++|+|+.....
T Consensus 280 e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 280 EILLDPWMQTPAE 292 (312)
T ss_dssp HHHHSTTTCC---
T ss_pred HHhcChhhcCchh
Confidence 9999999987654
No 194
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-37 Score=353.69 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.+. .+++.||||+++.. ......+.+.+|+.+++.++||||++++++|.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 368999999999999999999984 45689999998743 344556789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 515 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 515 (1196)
...+|+|||||+ ++|.+++.....
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (314)
T 2ivs_A 98 -------------------------------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140 (314)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------------
T ss_pred -------------------------------------CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccc
Confidence 334699999997 699999976543
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 516 ------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 516 ------l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 141 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~ 207 (314)
T 2ivs_A 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------YV 207 (314)
T ss_dssp ----CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------EE
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc-------------ce
Confidence 88999999999999999999999999999999999999999999999999976532210 11
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......+|+.|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....++.....++.+.+|
T Consensus 208 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l 284 (314)
T 2ivs_A 208 KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLK-TGHRMERPDNCSEEMYRL 284 (314)
T ss_dssp CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-Hhh-cCCcCCCCccCCHHHHHH
Confidence 2234567899999999987 568999999999999999996 665544333322 222 223333445667899999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|.+||+.||.+|||+.+++++
T Consensus 285 i~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 285 MLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999975
No 195
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-37 Score=347.44 Aligned_cols=247 Identities=25% Similarity=0.405 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhH-----HHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-----DRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~-----~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|++..+++.||||++.......... +.+.+|+.+++.++||||+++++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 478999999999999999999999999999999987654332222 678999999999999999999988722
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
.. ++||||++ ++|.+.+... ..+++..++.++.||+.||
T Consensus 95 -------------------------------------~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l 135 (287)
T 4f0f_A 95 -------------------------------------PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135 (287)
T ss_dssp -------------------------------------TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHH
Confidence 11 69999997 6998877644 4799999999999999999
Q ss_pred HHHHhCC--CcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 533 AHIHGQG--IIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 533 ~yLHs~g--IiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
+|||++| |+||||||+|||++.++. +||+|||+++.... ......||+.|+|||+
T Consensus 136 ~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~g~~~y~aPE~ 197 (287)
T 4f0f_A 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------------------SVSGLLGNFQWMAPET 197 (287)
T ss_dssp HHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS------------------CEECCCCCCTTSCGGG
T ss_pred HHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc------------------cccccCCCccccCchh
Confidence 9999999 999999999999988776 99999999974321 1234579999999999
Q ss_pred ccC-CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHH-HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 606 EQG-WPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 606 l~~-~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~-~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
+.+ ...++.++|||||||++|||++ ||........ ...........+......++.+.+||.+||+.||.+|||+
T Consensus 198 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 277 (287)
T 4f0f_A 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277 (287)
T ss_dssp SSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCH
Confidence 843 2447899999999999999997 7765433222 1222222333344445667899999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.++++.
T Consensus 278 ~~ll~~ 283 (287)
T 4f0f_A 278 SYIVKE 283 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 196
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-37 Score=357.55 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=193.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++.+.||+|+||+||+|++..+++.+ |+|.++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 88 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---
Confidence 3478999999999999999999998887764 77766532 233345789999999999999999999998842
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+++|+|+. |+|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 130 (327)
T 3poz_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578899986 699999876 45799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+|+....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3poz_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-------------cccccCCCccccccChHHhcc-CCC
Confidence 999999999999999999999999999999999987643211 111234567899999999988 578
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......... ..+. ....++.....++++.+++.+||+.||.+|||+.+++++
T Consensus 197 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHH-TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-HHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999986 67654433322 2222 233333444567799999999999999999999999976
No 197
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.6e-38 Score=358.41 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=207.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcC--CCCeeeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWF 450 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~ 450 (1196)
....++|++.+.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344678999999999999999999999999999999997653221 12245678999999996 599999999873
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC--CCHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~--gsL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
. ...++++|||+. ++|.+++.....+++..++.++.||
T Consensus 119 ~----------------------------------------~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 119 R----------------------------------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158 (320)
T ss_dssp C----------------------------------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHH
Confidence 2 356799999996 6999999988899999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+.||+|||++||+||||||+|||++ .++.+||+|||+++..... ......||+.|+|||++.
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~gt~~y~aPE~~~ 221 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIR 221 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc-----------------cccCCCCCccCCChHHhc
Confidence 9999999999999999999999999 7799999999999764321 113357999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+...++.++|||||||++|||++ ||...... .......+ ...++++.+||++||+.||.+|||+.+++
T Consensus 222 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------hccccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 75545789999999999999997 77654321 11111222 34567999999999999999999999999
Q ss_pred hccCCCCchH
Q 000993 685 QDALPPQMEY 694 (1196)
Q Consensus 685 ~~~~~~~~~~ 694 (1196)
+|+||.....
T Consensus 293 ~hp~~~~~~~ 302 (320)
T 3a99_A 293 NHPWMQDVLL 302 (320)
T ss_dssp TSGGGSSCCC
T ss_pred cCHhhcCccC
Confidence 9999988754
No 198
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.5e-37 Score=348.54 Aligned_cols=252 Identities=27% Similarity=0.504 Sum_probs=193.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||++++++|.+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34678999999999999999999999999999999997543 234456778999999999999999999998743
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+||||+++ +|.+++.. ...+++..++.++.||+.|
T Consensus 104 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 148 (310)
T 2wqm_A 104 -----------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148 (310)
T ss_dssp -----------------------------------TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 3467999999975 99998864 4569999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+ ..
T Consensus 149 l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~ 212 (310)
T 2wqm_A 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NG 212 (310)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------------------------------CCSSCCHHHHTT-CC
T ss_pred HHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC---------------ccccccCCCeeEeChHHhCC-CC
Confidence 999999999999999999999999999999999998653221 01234578999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++||||||+++|+|++ ||...... ......+. ....++ .....++++.+||.+||+.||.+|||+.+++++
T Consensus 213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 8999999999999999997 77543221 11222222 223332 224567789999999999999999999999974
No 199
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.6e-37 Score=343.24 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=191.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------ 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec------
Confidence 478999999999999999999985 899999998654322 2234678899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++. ...+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 78 ----------------------------------EPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp ----------------------------------C--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345699999997 58888875 457999999999999999999999
Q ss_pred hCC---CcccCCCcCcEEecC--------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 537 GQG---IIHRDLTPNNIFFDA--------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 537 s~g---IiHrDLKp~NILld~--------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
++| |+||||||+|||++. ++.+||+|||+++...... .....||+.|+|||+
T Consensus 123 ~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE~ 185 (271)
T 3dtc_A 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----------------KMSAAGAYAWMAPEV 185 (271)
T ss_dssp HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------------------CCGGGSCHHH
T ss_pred hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------ccCCCCccceeCHHH
Confidence 999 899999999999986 6789999999997643211 123479999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+.+ ..++.++||||||+++|+|++ ||.............. ....++.....++.+.++|.+||+.||.+|||+.+
T Consensus 186 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 263 (271)
T 3dtc_A 186 IRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN 263 (271)
T ss_dssp HHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence 987 568999999999999999996 8876655554444333 22223333456788999999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
++++
T Consensus 264 ~l~~ 267 (271)
T 3dtc_A 264 ILDQ 267 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9976
No 200
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.1e-37 Score=346.93 Aligned_cols=260 Identities=35% Similarity=0.658 Sum_probs=203.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.++|++.+.||+|+||.||+|++..+|+.||+|+++... ..+.+|+.+++.++||||++++++|.......
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 345678999999999999999999999999999999997532 24678999999999999999999874321100
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~ 533 (1196)
. .............+|+|||||++ +|.+++... ..+++..++.++.||+.||+
T Consensus 81 ---~---------------------~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 136 (284)
T 2a19_B 81 ---E---------------------TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136 (284)
T ss_dssp --------------------------------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred ---c---------------------cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence 0 00000111235678999999985 999999754 57999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++
T Consensus 137 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 199 (284)
T 2a19_B 137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------KRTRSKGTLRYMSPEQISS-QDYG 199 (284)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS----------------CCCCCCSCCTTSCHHHHHC-SCCC
T ss_pred HHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc----------------cccccCCcccccChhhhcc-CCCc
Confidence 9999999999999999999999999999999997643211 1234579999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 614 ~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.++|||||||++|||++...+..........+. ....+. ..++.+.+||.+||+.||.+|||+.+++++.
T Consensus 200 ~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp THHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh-cccccc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999999999984333322222222222 222332 3456899999999999999999999999875
No 201
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=358.47 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=200.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++... .......+.+|+.+++.+ +||||++++++|..
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 478999999999999999999983 356789999997432 223446789999999999 99999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 121 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (344)
T 1rjb_A 121 --------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162 (344)
T ss_dssp --------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------
T ss_pred --------------------------------------CCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccc
Confidence 234699999996 59999997643
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 515 -----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 515 -----~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 163 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~ 229 (344)
T 1rjb_A 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YV 229 (344)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------ce
Confidence 378999999999999999999999999999999999999999999999999986532210 01
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||............+. ....++.....++++.+|
T Consensus 230 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 307 (344)
T 1rjb_A 230 VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYII 307 (344)
T ss_dssp EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHH
Confidence 1234568899999999987 568999999999999999996 7765543333333333 223333334567899999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|.+||+.||.+|||+.+++++
T Consensus 308 i~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 308 MQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHH
Confidence 999999999999999999986
No 202
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=358.91 Aligned_cols=250 Identities=23% Similarity=0.351 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||.||+|++..+ +..||||+++.. ........+.+|+.+++.+ +|||||+++++|.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 47899999999999999999998643 357999998743 3444567899999999999 99999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 147 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 186 (382)
T 3tt0_A 147 ----------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186 (382)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCC
T ss_pred ----------------------------------------CCceEEEEEecCCCcHHHHHHHhccccccccccccccccc
Confidence 234699999996 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....... .......
T Consensus 187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~~~~ 253 (382)
T 3tt0_A 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNG 253 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT-------------TCCCTTC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccc-------------cccccCC
Confidence 499999999999999999999999999999999999999999999999999986532210 1122345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....+......++++.+||++||
T Consensus 254 ~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 330 (382)
T 3tt0_A 254 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LK-EGHRMDKPSNCTNELYMMMRDCW 330 (382)
T ss_dssp CCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-TTCCCCCCSSCCHHHHHHHHHHT
T ss_pred CCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHc
Confidence 68899999999988 578999999999999999986 7765554443332 22 22233334456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 331 ~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 331 HAVPSQRPTFKQLVED 346 (382)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
No 203
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.4e-37 Score=350.46 Aligned_cols=251 Identities=24% Similarity=0.286 Sum_probs=202.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ......+.+.+|+.+++.+ +||||++++++|..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 36899999999999999999996 346789999998743 2334557899999999999 99999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------------------ 514 (1196)
....|+|||||++ +|.+++....
T Consensus 99 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (313)
T 1t46_A 99 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140 (313)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------C
T ss_pred --------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccc
Confidence 2346899999975 9999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~ 207 (313)
T 1t46_A 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNA 207 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-------------SEECSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc-------------ceeccCC
Confidence 489999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||............+... ..+......++.+.+||.+||
T Consensus 208 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l 285 (313)
T 1t46_A 208 RLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG-FRMLSPEHAPAEMYDIMKTCW 285 (313)
T ss_dssp EECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHT
T ss_pred CCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccC-CCCCCcccCCHHHHHHHHHHc
Confidence 68899999999987 568999999999999999986 665543333333333322 223333456779999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 286 ~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 286 DADPLKRPTFKQIVQL 301 (313)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCCchhCcCHHHHHHH
Confidence 9999999999999975
No 204
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-37 Score=347.40 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=200.9
Q ss_pred CCceEEe-eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+ .||+|+||.||+|.+ ..+++.||||+++.........+.+.+|+.+++.++||||+++++++ +
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~------ 88 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E------ 88 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E------
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C------
Confidence 5788888 999999999999955 55688999999976555555567899999999999999999999887 1
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 89 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 ----------------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 201 (291)
T 1xbb_A 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKS 201 (291)
T ss_dssp HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHH
T ss_pred hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC------------cccccccCCCCceeeChHHhcc-CCCChhh
Confidence 99999999999999999999999999999986532210 0111233457899999999987 4688999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|+|++ ||......+...... ....+......++.+.++|.+||+.||.+||++.++++.
T Consensus 202 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999996 777655544333222 233333444567899999999999999999999999863
No 205
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.4e-37 Score=352.21 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.+ +||||++++++|...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC-
Confidence 368999999999999999999963 46789999998743 3334556799999999999 799999999987431
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC----------------C
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------F 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------l 516 (1196)
...+|+|||||++ +|.+++..... +
T Consensus 104 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
T 2xir_A 104 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145 (316)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCE
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcccc
Confidence 2346999999975 99999986543 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .........|
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~~ 212 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 212 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc-------------cceeccCCCc
Confidence 999999999999999999999999999999999999999999999999998643211 0111234568
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|+|||++.+ ..++.++|||||||++|||++ ||............+... ..++.....++.+.++|.+||+.
T Consensus 213 t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~ 290 (316)
T 2xir_A 213 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDCWHG 290 (316)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred ceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC-ccCCCCCCCCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 776544333333333322 22223344678999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.++++|
T Consensus 291 dp~~Rps~~ell~~ 304 (316)
T 2xir_A 291 EPSQRPTFSELVEH 304 (316)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999999987
No 206
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=349.50 Aligned_cols=240 Identities=30% Similarity=0.460 Sum_probs=191.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++. ++.||||++.. ....+.+.+|+.+++.++||||+++++++.
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACL--------- 71 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT---------
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc---------
Confidence 468999999999999999999885 88999998853 234567899999999999999999998762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...|+|||||+ ++|.+++.... .++...++.++.||+.||+||
T Consensus 72 ---------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~L 118 (307)
T 2eva_A 72 ---------------------------------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118 (307)
T ss_dssp ---------------------------------TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 12489999996 59999998655 378999999999999999999
Q ss_pred Hh---CCCcccCCCcCcEEecCCCC-eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 536 HG---QGIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 536 Hs---~gIiHrDLKp~NILld~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+ +||+||||||+|||++.++. +||+|||+++..... .....||+.|+|||++.+ ..
T Consensus 119 H~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~ 179 (307)
T 2eva_A 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------MTNNKGSAAWMAPEVFEG-SN 179 (307)
T ss_dssp HTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------CCTTSSCHHHHTC-CC
T ss_pred HhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------cccCCCCCceEChhhhCC-CC
Confidence 99 89999999999999998887 799999999754211 123469999999999987 57
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++|||||||++|||++ ||...................++.....++.+.+||.+||+.||.+|||+.+++++
T Consensus 180 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999997 77643222111111122344455556677899999999999999999999999974
No 207
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=356.89 Aligned_cols=262 Identities=18% Similarity=0.246 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCch---------hHHHHHHHHHHHHhcCCCCeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLP---------VNDRILREVATLSRLQHQHVVRYYQ 447 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~---------~~~~~~~Ev~iL~~L~HpnIV~l~~ 447 (1196)
.++|++.+.||+|+||.||+|++.. ++..+|||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999987 788999999875432111 1124668889999999999999999
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
++.... .....+|+|||||+++|.+++.....+++..++.++.|
T Consensus 116 ~~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~q 159 (345)
T 2v62_A 116 SGLTEF------------------------------------KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIR 159 (345)
T ss_dssp EEEEES------------------------------------SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHH
T ss_pred cccccc------------------------------------CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence 885421 12467899999997799999988779999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|+.||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||+
T Consensus 160 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~ 231 (345)
T 2v62_A 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY--------QENPRKGHNGTIEFTSLDA 231 (345)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCC--------CCCGGGCSCSCTTTCCHHH
T ss_pred HHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccc--------hhccccccCCCccccCHHH
Confidence 99999999999999999999999999887 9999999999876433211000 0111245689999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHH--HHHHHHHhhhcCCCCCcc------ccCCHHHHHHHHHcccCCC
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSW------VAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~------~~~~~~l~~LI~~cL~~dP 674 (1196)
+.+ ..++.++|||||||++|||++ ||..... ..............|... ...++++.++|.+||+.||
T Consensus 232 ~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 310 (345)
T 2v62_A 232 HKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY 310 (345)
T ss_dssp HHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCT
T ss_pred hcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCc
Confidence 998 568999999999999999997 8854221 111111111112222211 1566799999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 311 ~~Rps~~~l~~~ 322 (345)
T 2v62_A 311 DEKPNYQALKKI 322 (345)
T ss_dssp TCCCCHHHHHHH
T ss_pred ccCCCHHHHHHH
Confidence 999999999874
No 208
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.8e-37 Score=362.30 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=193.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++ .++..||||+++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--- 117 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--- 117 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---
Confidence 34568999999999999999999987 467789999987532 34456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.... .+++.+++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (373)
T 2qol_A 118 -------------------------------------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160 (373)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 345699999996 69999997654 699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (373)
T 2qol_A 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA------------AYTTRGGKIPIRWTSPEAIAY-RKF 227 (373)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------------------CTTSCHHHHHH-CCC
T ss_pred HHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc------------ceeccCCCcCCCccChhhhcc-CCc
Confidence 9999999999999999999999999999999999875422100 011223356789999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.||.+||++.++++.
T Consensus 228 ~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT--TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 999999999999999885 7776555444333222 22222334566789999999999999999999999863
No 209
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2e-37 Score=355.68 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=194.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++. ++.||||+++.. ........+|+.+++.++|||||++++++.+..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 91 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT------ 91 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC------
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCC------
Confidence 368999999999999999999886 899999998643 233445667999999999999999999985431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+.
T Consensus 92 ------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 92 ------------------------------SVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp ------------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------CCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 499999976 4599999999999999999999999
Q ss_pred ----------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 539 ----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 539 ----------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
||+||||||+|||++.++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~ 207 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS-------------AGDTHGQVGTRRYMAPEVLEG 207 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC-------------CCCCTTCCCCGGGCCHHHHTT
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC-------------ccccccCccCccccCHhhccc
Confidence 999999999999999999999999999986532210 112234689999999999986
Q ss_pred C----CCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCC---Ccccc--CCHH
Q 000993 609 W----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELP---PSWVA--KFSE 661 (1196)
Q Consensus 609 ~----~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p---~~~~~--~~~~ 661 (1196)
. ..++.++|||||||++|||++ ||.... ...............| ..+.. .+++
T Consensus 208 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
T 3soc_A 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287 (322)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHH
T ss_pred ccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHH
Confidence 3 235568899999999999997 664321 1111122222222222 11111 1245
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 662 QESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 662 l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.+||++||+.||.+|||+.++++.
T Consensus 288 l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 288 LCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 8999999999999999999999974
No 210
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-36 Score=366.60 Aligned_cols=244 Identities=24% Similarity=0.320 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|+.+|+.++|||||++++++.
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--------- 253 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT--------- 253 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 468999999999999999999997 57889999997533 23568999999999999999999998862
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 254 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 254 --------------------------------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999996 5999999754 36899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++
T Consensus 302 ~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 366 (454)
T 1qcf_A 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------AREGAKFPIKWTAPEAINF-GSFTIKS 366 (454)
T ss_dssp HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH--------------TTCSSSSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee--------------ccCCCcccccccCHHHhcc-CCCCcHH
Confidence 999999999999999999999999999999875432111 1233457889999999987 5699999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||+||||++ ||......+....... . ..++.....++++.+||.+||+.||.+|||+.+|++
T Consensus 367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-G-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-T-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-C-CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 7876655554433322 2 223334566789999999999999999999999986
No 211
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.7e-37 Score=357.04 Aligned_cols=257 Identities=23% Similarity=0.339 Sum_probs=180.4
Q ss_pred CCcccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~-~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.....++|.+.+ .||+|+||+||+|+++.+|+.||||++... ... ..+....++.+.||||++++++|....
T Consensus 23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~- 95 (336)
T 3fhr_A 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKA---RQEVDHHWQASGGPHIVCILDVYENMH- 95 (336)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHH---HHHHHHHHHHTTSTTBCCEEEEEEEEE-
T ss_pred CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHH---HHHHHHHHHhcCCCChHHHHHHHhhcc-
Confidence 344568999966 599999999999999999999999998632 111 222233456679999999999874311
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qIa~g 531 (1196)
.....+|+|||||++ +|.+++.... .+++.+++.++.||+.|
T Consensus 96 -----------------------------------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~ 140 (336)
T 3fhr_A 96 -----------------------------------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140 (336)
T ss_dssp -----------------------------------TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 124568999999975 9999998654 69999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.+ +.+||+|||+++..... .....+||+.|+|||++.+
T Consensus 141 l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~ 203 (336)
T 3fhr_A 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----------------ALQTPCYTPYYVAPEVLGP 203 (336)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------------------
T ss_pred HHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----------------ccccCCCCcCccChhhhCC
Confidence 999999999999999999999864 55999999999754311 1234578999999999976
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHH----HHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVL----SDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~----~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..++.++|||||||++|+|++ ||.......... ........ .++.+...++++.+||++||+.||.+|||+
T Consensus 204 -~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 282 (336)
T 3fhr_A 204 -EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI 282 (336)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred -CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCH
Confidence 568999999999999999996 776554332211 11111112 223445678899999999999999999999
Q ss_pred HHHHhccCCCCc
Q 000993 681 TELLQDALPPQM 692 (1196)
Q Consensus 681 ~eiL~~~~~~~~ 692 (1196)
.++++|+||.+.
T Consensus 283 ~ell~hp~~~~~ 294 (336)
T 3fhr_A 283 TQFMNHPWINQS 294 (336)
T ss_dssp HHHHHSHHHHTG
T ss_pred HHHhcCcccccc
Confidence 999999998753
No 212
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.8e-37 Score=345.29 Aligned_cols=247 Identities=23% Similarity=0.299 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.++.++..||+|++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 80 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 80 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 47899999999999999999999999999999998642 2345778999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 81 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 81 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp --------------------------------SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999999864 45999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (288)
T 3kfa_A 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 193 (288)
T ss_dssp HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCCHHH
T ss_pred HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--------------cccccCCccccCcCChhhhcc-CCCCchh
Confidence 9999999999999999999999999999998653221 011234567889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|+|++ ||........... +. ....++.....++.+.+||++||+.||.+|||+.++++.
T Consensus 194 Di~slG~il~~ll~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-LE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-Hh-ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 99999999999996 6654433332222 22 222233334567899999999999999999999999874
No 213
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.2e-37 Score=348.66 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++...........+.+|+.+++.++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS-- 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc--
Confidence 4689999999999999999998875 45689999998766666666789999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh------hcCCCCHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE------SYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~------~~~~l~e~~~~~i~~qIa 529 (1196)
......|+|||||+ ++|.+++. ....+++..++.++.||+
T Consensus 111 ---------------------------------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 157 (313)
T 3brb_A 111 ---------------------------------QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157 (313)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHH
Confidence 11235799999997 59999884 235699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+
T Consensus 158 ~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 223 (313)
T 3brb_A 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-------------YRQGRIAKMPVKWIAIESLAD- 223 (313)
T ss_dssp HHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------CCGGGSCHHHHHS-
T ss_pred HHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccc-------------cCcccccCCCccccCchhhcC-
Confidence 999999999999999999999999999999999999986532211 111234467889999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|+|++ ||............. ....++.....++.+.++|.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL--HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH--TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH--cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 578999999999999999997 666544433333222 22233444566789999999999999999999999997
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
+
T Consensus 302 ~ 302 (313)
T 3brb_A 302 Q 302 (313)
T ss_dssp H
T ss_pred H
Confidence 5
No 214
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7e-37 Score=349.91 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=203.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|+++ .+++.||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 99 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 99 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc---
Confidence 468999999999999999999987 35789999998643 333455678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|+|||||+ ++|.+++... ..+++..++.
T Consensus 100 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (322)
T 1p4o_A 100 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142 (322)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred -------------------------------------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHH
Confidence 234689999997 5999998653 4579999999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus 143 i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 209 (322)
T ss_dssp HHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-------------EGGGSSEECGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccccccccc-------------ccccCCCCCCCccCh
Confidence 9999999999999999999999999999999999999999999865432210 112345678999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+||.+||+.||.+|||
T Consensus 210 E~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 286 (322)
T 1p4o_A 210 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286 (322)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999986 676555444433322 23333344566788999999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.+++++
T Consensus 287 ~~e~l~~ 293 (322)
T 1p4o_A 287 FLEIISS 293 (322)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 215
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.9e-37 Score=368.54 Aligned_cols=241 Identities=24% Similarity=0.390 Sum_probs=198.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+|+.++|||||++++++.+.
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 258 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 258 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-------
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-------
Confidence 478999999999999999999886 8899999987432 346789999999999999999999987432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+|||
T Consensus 259 --------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 259 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp --------------------------------TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235799999996 599999987654 799999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 307 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~s 367 (450)
T 1k9a_A 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 367 (450)
T ss_dssp HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------------------------CCCTTTSCHHHHHS-SCCCHHH
T ss_pred hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc------------------ccCCCCCcceeCHHHhcC-CCCCcHH
Confidence 999999999999999999999999999999743211 122367889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+..... . .+..++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 368 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~-~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-H-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999996 77655444333322 2 222333445667899999999999999999999999863
No 216
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-37 Score=356.32 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=196.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||+||+|++..+++. ||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP----- 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 47899999999999999999999888876 7777765332 2222345778999999999999999998762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|||||+ ++|.+++... ..+++..++.++.||+.||+
T Consensus 86 ------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~ 129 (325)
T 3kex_A 86 ------------------------------------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129 (325)
T ss_dssp ------------------------------------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHH
Confidence 234689999997 6999988764 57999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 130 ~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 195 (325)
T 3kex_A 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-------------QLLYSEAKTPIKWMALESIHF-GKYT 195 (325)
T ss_dssp HHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-------------CCC-----CCTTTSCHHHHHH-CCCC
T ss_pred HHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-------------cccccCCCCcccccChHHhcc-CCCC
Confidence 99999999999999999999999999999999987532210 111234578889999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+...... ....+......++++.++|.+||+.||.+|||+.+++++
T Consensus 196 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH--TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred hhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH--cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 776554433322222 222222223345678899999999999999999999986
No 217
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.9e-37 Score=352.00 Aligned_cols=253 Identities=28% Similarity=0.447 Sum_probs=204.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|++ ..+++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 96 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP--- 96 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---
Confidence 47899999999999999999994 568999999998643 334556799999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 97 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~ 141 (327)
T 3lxl_A 97 -----------------------------------GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 141 (327)
T ss_dssp -----------------------------------SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 2456899999995 699999976 456999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ..........||+.|+|||++.+ ..++
T Consensus 142 ~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~~~~~~y~aPE~~~~-~~~~ 208 (327)
T 3lxl_A 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK------------DYYVVREPGQSPIFWYAPESLSD-NIFS 208 (327)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC------------SEEECSSCCCSCGGGSCHHHHHH-CEEE
T ss_pred HHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC------------ccceeeccCCccccccCHHHhcc-CCCC
Confidence 9999999999999999999999999999999998653221 01112344578999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHH--------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQ--------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~--------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
.++|||||||++|+|++ ||....... .....+ .....++.....++.+.+||++||+.||.+
T Consensus 209 ~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 287 (327)
T 3lxl_A 209 RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL-EEGQRLPAPPACPAEVHELMKLCWAPSPQD 287 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred hHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh-hcccCCCCCCcccHHHHHHHHHHcCCChhh
Confidence 99999999999999997 554333221 111122 233334444567789999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.+++++
T Consensus 288 Rps~~ell~~ 297 (327)
T 3lxl_A 288 RPSFSALGPQ 297 (327)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999875
No 218
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.1e-37 Score=345.10 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=192.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|++.++||+|+||.||+|++. ..||||+++.........+.+.+|+.+++.++||||+++++++.
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------- 90 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--------- 90 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---------
Confidence 468999999999999999999865 35999999876666666788999999999999999999997541
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+++|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~ 138 (289)
T 3og7_A 91 --------------------------------APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138 (289)
T ss_dssp --------------------------------SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 234689999997 599998864 4569999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~k 615 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.. ...++.+
T Consensus 139 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 205 (289)
T 3og7_A 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205 (289)
T ss_dssp TTCCCSCCCGGGEEEETTTEEEECCCC-------------------------------CCCTTCCHHHHC----CCSCHH
T ss_pred CCcccccCccceEEECCCCCEEEccceeccccccccc-------------cccccccCCCccccCchhhcccCCCCCCcc
Confidence 9999999999999999999999999999976432110 011234579999999999862 2457889
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||................... +......++.+.+||.+||+.||.+|||+.++++.
T Consensus 206 ~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 999999999999996 887655544444443322221 12233567889999999999999999999999874
No 219
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6e-37 Score=346.49 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=193.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|++.+.||+|+||+||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~--- 75 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR--- 75 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE---
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc---
Confidence 457999999999999999999988 5999999998632 34556677777776 79999999999875421
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+||
T Consensus 76 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 76 ---------------------------------HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp ---------------------------------TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHH
Confidence 22457899999997 599999954 5799999999999999999999
Q ss_pred H--------hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 536 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 536 H--------s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
| ++||+||||||+|||++.++.+||+|||+|+........ .........||+.|+|||++.
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 190 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ-----------LDVGNNPRVGTKRYMAPEVLD 190 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EECCCCCCCCCGGGCCHHHHT
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc-----------ccccccccccccceeChhhhc
Confidence 9 999999999999999999999999999999765432111 011223458999999999998
Q ss_pred CCC-----CCCCcchhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCCC---CCcc--ccCCH
Q 000993 608 GWP-----KIDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGEL---PPSW--VAKFS 660 (1196)
Q Consensus 608 ~~~-----~~s~ksDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~~---p~~~--~~~~~ 660 (1196)
+.. .++.++|||||||++|||++ ||.... ............... |..+ ...++
T Consensus 191 ~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (301)
T 3q4u_A 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270 (301)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHH
T ss_pred CcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHH
Confidence 742 23478999999999999985 443221 112222222222222 2211 11335
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+.+||++||+.||.+|||+.++++.
T Consensus 271 ~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 271 SLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 78999999999999999999999874
No 220
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-36 Score=337.59 Aligned_cols=245 Identities=22% Similarity=0.377 Sum_probs=201.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|+.+++.++||||+++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 74 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 74 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS---------
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcc---------
Confidence 68999999999999999999997 7889999999754332 4678999999999999999999998732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 123 (267)
T 3t9t_A 75 -------------------------------QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123 (267)
T ss_dssp -------------------------------SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234699999996 5999999765 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++||
T Consensus 124 ~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 188 (267)
T 3t9t_A 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 188 (267)
T ss_dssp TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CcccCCCchheEEECCCCCEEEcccccccccccccc--------------cccccccccccccChhhhcC-CCccchhch
Confidence 999999999999999999999999999986532211 11233467889999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|+|++ ||......+........ ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 189 ~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC--CcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999986 77665554444333222 2222233456789999999999999999999999975
No 221
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.1e-37 Score=352.36 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=202.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|.+..+++ .||+|++.... .......+.+|+.+++.+ +||||++++++|.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTH-- 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec--
Confidence 4789999999999999999999987664 79999987433 334567799999999999 89999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--------------CCCCH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--------------DHFDK 518 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--------------~~l~e 518 (1196)
...+|+|||||++ +|.+++... ..+++
T Consensus 122 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
T 2i1m_A 122 --------------------------------------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163 (333)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCH
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCH
Confidence 2346999999975 999998643 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........||+
T Consensus 164 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~ 230 (333)
T 2i1m_A 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPV 230 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT-------------SEECSSCEECG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc-------------eeecCCCCCCc
Confidence 99999999999999999999999999999999999999999999999986532210 01123456789
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||................ ..++.....++.+.+||.+||+.||
T Consensus 231 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p 308 (333)
T 2i1m_A 231 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG-YQMAQPAFAPKNIYSIMQACWALEP 308 (333)
T ss_dssp GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhccCh
Confidence 9999999987 568999999999999999996 776544333333333322 2222333456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.+++++
T Consensus 309 ~~Rps~~~l~~~ 320 (333)
T 2i1m_A 309 THRPTFQQICSF 320 (333)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999874
No 222
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-36 Score=342.84 Aligned_cols=256 Identities=24% Similarity=0.254 Sum_probs=200.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccC-------
Confidence 357899999999999999999999999999999998754332 358899999999999998877765532
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....|+||||++++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 123 (296)
T 3uzp_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2456799999998899999974 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 3uzp_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccc--------cccccccccccccCChhhhcC-CCCCc
Confidence 999999999999999 478999999999998754332111000 012345689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||..... .+............+ ......++++.+||++||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9999999999999996 7764211 111111111111111 1223456789999999999999999999999863
No 223
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-36 Score=349.41 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=199.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEE--EEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v--AVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++.+|..+ |||.+... ........+.+|+.+++.+ +||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--- 97 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--- 97 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE---
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeee---
Confidence 34589999999999999999999999888865 99988642 2333456789999999999 99999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~ 517 (1196)
...+|+|||||+ ++|.+++.... .++
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (327)
T 1fvr_A 98 -------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140 (327)
T ss_dssp -------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSC
T ss_pred -------------------------------------CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCC
Confidence 356899999996 59999997654 699
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .......+|
T Consensus 141 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~----------------~~~~~~~~~ 204 (327)
T 1fvr_A 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLP 204 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE----------------CCC----CC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccccc----------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999743211 112334678
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+....... ...+......++.+.+||.+||+.|
T Consensus 205 ~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~d 281 (327)
T 1fvr_A 205 VRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRLEKPLNCDDEVYDLMRQCWREK 281 (327)
T ss_dssp TTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG--TCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHHccCC
Confidence 89999999987 568999999999999999995 7766555444333222 2223333456789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+|||+.+++++
T Consensus 282 p~~Rps~~ell~~ 294 (327)
T 1fvr_A 282 PYERPSFAQILVS 294 (327)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999976
No 224
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=367.99 Aligned_cols=256 Identities=29% Similarity=0.400 Sum_probs=191.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+|.+.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+ +|||||++++++.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------- 89 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKD-------- 89 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEE--------
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEec--------
Confidence 3689999999999999764 4455899999999864322 2356899999999 89999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+|+|.+++.... .+.+..++.++.||+.||+|||++
T Consensus 90 --------------------------------~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 137 (432)
T 3p23_A 90 --------------------------------RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137 (432)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC
Confidence 45689999999999999997654 466667789999999999999999
Q ss_pred CCcccCCCcCcEEecC---C--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCC
Q 000993 539 GIIHRDLTPNNIFFDA---R--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPK 611 (1196)
Q Consensus 539 gIiHrDLKp~NILld~---~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~ 611 (1196)
||+||||||+|||++. + ..+||+|||+|+........ .......+||+.|+|||++.+ ...
T Consensus 138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~------------~~~~~~~~gt~~y~APE~l~~~~~~~ 205 (432)
T 3p23_A 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS------------FSRRSGVPGTEGWIAPEMLSEDCKEN 205 (432)
T ss_dssp TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------------------CCSCTTSCCGGGTSCC---C
T ss_pred cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc------------eeeccccCCCcCccChhhhhcccccC
Confidence 9999999999999953 2 35889999999865422100 012245679999999999974 245
Q ss_pred CCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++|||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++||
T Consensus 206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 7889999999999999997 675544433322111111111111122234678999999999999999999999999
Q ss_pred CCCCchH
Q 000993 688 LPPQMEY 694 (1196)
Q Consensus 688 ~~~~~~~ 694 (1196)
||....+
T Consensus 286 ~f~~~~~ 292 (432)
T 3p23_A 286 FFWSLEK 292 (432)
T ss_dssp TTCCHHH
T ss_pred cccChHH
Confidence 9998765
No 225
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-36 Score=342.51 Aligned_cols=252 Identities=20% Similarity=0.231 Sum_probs=199.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-.|...+.||+|+||+||+|.+..+++ .||+|++.. .......+.+.+|+.+++.++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 94 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----- 94 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc-cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-----
Confidence 356778999999999999999875554 799999864 23334567889999999999999999999987432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+++|||+. ++|.+++.. ...+++..++.++.||+.||+||
T Consensus 95 ----------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (298)
T 3pls_A 95 ----------------------------------EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140 (298)
T ss_dssp ----------------------------------SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 223489999995 699999976 45689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 141 H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 208 (298)
T 3pls_A 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS-----------VQQHRHARLPVKWTALESLQT-YRFTTK 208 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------SCCSSCTTCGGGGSCHHHHTT-CCCCHH
T ss_pred HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------cccCcCCCCCccccChhhhcc-CCCChh
Confidence 99999999999999999999999999999998654322111 112234578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---C-CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---P-FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---P-f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ | |........ ...+. ....++.....++.+.++|++||+.||.+|||+.++++.
T Consensus 209 ~Di~slG~il~~l~~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDL-THFLA-QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTTTSCGGGH-HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hchhhHHHHHHHHhhCCCCCCccCCHHHH-HHHhh-cCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999996 4 333332222 22222 222333344567789999999999999999999999964
No 226
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=352.93 Aligned_cols=266 Identities=13% Similarity=0.252 Sum_probs=198.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc--------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL--------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~--------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
++|.+.+.||+|+||.||+|++.. +++.||||++... ..+.+|+.+++.++||||+++++.+...
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 789999999999999999999987 4889999998743 3578999999999999999976554211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~ 530 (1196)
.... ...+.+. .......+|+|||||+++|.+++... ..+++..++.++.||+.
T Consensus 115 ~~~~-----------------------i~~~~~~-~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 115 PLLA-----------------------IPTCMGF-GVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp TTCS-----------------------CCCCCEE-EEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred CccC-----------------------ccchhhc-cccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHH
Confidence 0000 0000000 00124678999999977999999876 78999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||++.+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY--------VEGSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC--------CTTSSCTTCSCTTTCCHHHHTT
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc--------cccccccccCCccccCHHHHcc
Confidence 99999999999999999999999998 8999999999876433211100 0112244589999999999988
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhH-HHHHHHHHh---hhcC-CCC---CccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDL---KQKG-ELP---PSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~-~~~~~~~~l---~~~~-~~p---~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||+||||++ ||.... ......... .... .++ ..+...++++.+||.+||+.||.+|
T Consensus 243 -~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 321 (352)
T 2jii_A 243 -CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEK 321 (352)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhC
Confidence 568999999999999999997 887653 222111111 1111 111 1223457899999999999999999
Q ss_pred CCHHHHHhc
Q 000993 678 PSATELLQD 686 (1196)
Q Consensus 678 Pta~eiL~~ 686 (1196)
||+.++++.
T Consensus 322 ps~~~l~~~ 330 (352)
T 2jii_A 322 PPYAMLRNN 330 (352)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999864
No 227
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=347.67 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=200.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRER------ 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE------
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc------
Confidence 36799999999999999999999999999999998653 3345678899999999999999999999885321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|||||.+ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 100 ------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~ 149 (317)
T 2buj_A 100 ------------------------------GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149 (317)
T ss_dssp ------------------------------TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 124578999999975 99998875 4679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~ 612 (1196)
||++||+||||||+|||++.++.+||+|||+++............ ..........||+.|+|||++.+.. .+
T Consensus 150 LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 223 (317)
T 2buj_A 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA------LTLQDWAAQRCTISYRAPELFSVQSHCVI 223 (317)
T ss_dssp HHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHH------HHHHHHHHHHSCGGGCCGGGSSCCSEEEE
T ss_pred HHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccc------ccccccccccCCcccCCHhHhccCCCcCC
Confidence 999999999999999999999999999999987543211000000 0000112346799999999987632 26
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH-HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~-~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||....... ....... .....+.....++.+.+||.+||+.||.+|||+.+++++
T Consensus 224 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 899999999999999997 665432211 1111111 222233344567899999999999999999999999986
No 228
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=350.18 Aligned_cols=264 Identities=25% Similarity=0.393 Sum_probs=185.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+|++.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~----- 100 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE----- 100 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT-----
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc-----
Confidence 4799999999999999999999999999999998643 3345667899999999996 9999999998853210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~---~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
........+|++||||+|+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 101 ---------------------------~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 101 ---------------------------ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp ---------------------------TSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------ccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01123567899999999999998864 456999999999999999999999
Q ss_pred hCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc--CCCCC
Q 000993 537 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ--GWPKI 612 (1196)
Q Consensus 537 s~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~~ 612 (1196)
++| |+||||||+|||++.++.+||+|||+++.......... ...............||+.|+|||++. ....+
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 230 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW---SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------CCTTSCS
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc---cccccccchhhccccCCCCcCChhhhhccccCCC
Confidence 999 99999999999999999999999999986543211000 000000011123457999999999984 22458
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......... ...... +.....++.+.+||++||+.||.+|||+.+++++
T Consensus 231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSI-PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCCC----------------CCC-CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccC-CcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 899999999999999997 77654333221 111122 2223445578899999999999999999999986
No 229
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.7e-36 Score=341.61 Aligned_cols=255 Identities=24% Similarity=0.250 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+|+.+++.++|+|++..+..+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~-------- 75 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA-------- 75 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEE--------
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecC--------
Confidence 47899999999999999999999999999999987654332 347889999999999998888766632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....++|||||+++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (296)
T 4hgt_A 76 -------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp -------------------------------ETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2456799999998899999974 45799999999999999999999999
Q ss_pred CCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 539 GIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 539 gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.+
T Consensus 125 ~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~~ 195 (296)
T 4hgt_A 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSRR 195 (296)
T ss_dssp TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCGGGCCHHHHTT-CCCCHH
T ss_pred CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC--------CCcccccCCCccccchHHhcC-CCCCch
Confidence 99999999999999 788999999999998764332111000 012345689999999999998 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH---HHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~---~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ ||...... .............+ ......++++.+||.+||+.||.+|||+.++++.
T Consensus 196 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 196 DDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 999999999999996 77642211 11111111111111 1223456789999999999999999999999863
No 230
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-36 Score=343.93 Aligned_cols=252 Identities=20% Similarity=0.241 Sum_probs=198.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||+||+|++..+ +..+|+|.+.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-----
Confidence 5799999999999999999997643 33689998864 23444567899999999999999999999886432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++||||++ +|.+++.. ...+++..++.++.||+.||+||
T Consensus 99 ----------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l 144 (298)
T 3f66_A 99 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144 (298)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 2356899999975 99999975 44689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........||+.|+|||++.+ ..++.+
T Consensus 145 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 212 (298)
T 3f66_A 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 212 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB-----------C-----CCBCGGGSCHHHHHH-CCCCHH
T ss_pred HhCCccCCCCchheEEECCCCCEEECcccccccccccchhc-----------cccccCCCCCccccChHHhcC-CCCChH
Confidence 99999999999999999999999999999998654322110 112344578899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ ||............... ..+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 213 ~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 55544433333333322 2222233456789999999999999999999999974
No 231
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-36 Score=347.87 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=196.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|.+.+.||+|+||.||+|.++.++ ..||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 117 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK--- 117 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec---
Confidence 3478999999999999999999987553 46999998743 233455678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (333)
T 1mqb_A 118 -------------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 160 (333)
T ss_dssp -------------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 3457999999975 999999764 5799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (333)
T 1mqb_A 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------TYTTSGGKIPIRWTAPEAISY-RKF 227 (333)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CCC
T ss_pred HHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc------------ccccCCCCccccccCchhccc-CCC
Confidence 9999999999999999999999999999999999865422100 111233457889999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......+..... . ....++.....++.+.+||.+||+.||.+||++.+++++
T Consensus 228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-N-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-H-TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-H-CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999986 77665554443332 2 222333344567799999999999999999999999875
No 232
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9e-37 Score=342.37 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|++..+ +..||+|++... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 47899999999999999999997643 446999998643 334456789999999999999999999988621
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...|+||||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 85 ------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 128 (281)
T 3cc6_A 85 ------------------------------------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128 (281)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 22489999997 5999999765 459999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 193 (281)
T 3cc6_A 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY--------------YKASVTRLPIKWMSPESINF-RRFTT 193 (281)
T ss_dssp HHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----------------------CCCCCGGGCCHHHHHH-CCCCH
T ss_pred HHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc--------------cccccCCCCcceeCchhhcc-CCCCc
Confidence 9999999999999999999999999999999986532210 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........... +. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 9999999999999986 6754333322222 22 222233334567889999999999999999999999976
No 233
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=350.68 Aligned_cols=249 Identities=24% Similarity=0.362 Sum_probs=194.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||.||+|++..+++.+ |+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec----
Confidence 478999999999999999999998888765 66665432 233456789999999999999999999998742
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|+|+. ++|.+++.. ...+++..++.++.||+.||+
T Consensus 89 -------------------------------------~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 131 (327)
T 3lzb_A 89 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131 (327)
T ss_dssp -------------------------------------SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 12578899986 699999876 456999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 132 ~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~~ 197 (327)
T 3lzb_A 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIYT 197 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------CCCGGGSCHHHHHH-CCCC
T ss_pred HHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-------------cccccCCCccccccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999987543211 111234467889999999988 5789
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+... .+. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 198 ~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILE-KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHH-TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHH-cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999986 776544433322 222 233333444567799999999999999999999999974
No 234
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-36 Score=349.33 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEE-----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~-----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|+ +..+++.||||++... .......++.+|+.+++.++||||+++++++.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC---
Confidence 4789999999999999999999 5567889999998633 344456689999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 526 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 526 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 147 (327)
T 2yfx_A 105 -------------------------------------SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147 (327)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHH
T ss_pred -------------------------------------CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHH
Confidence 234589999995 59999997653 489999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.+ ..+||+|||+++........ .......||+.|+||
T Consensus 148 qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 148 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------RKGGCAMLPVKWMPP 214 (327)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------CCGGGSCGGGCCH
T ss_pred HHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc-------------ccCCCcCCCcceeCH
Confidence 99999999999999999999999999844 46999999999865422110 112345689999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||
T Consensus 215 E~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 291 (327)
T 2yfx_A 215 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291 (327)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 99987 568999999999999999996 6765544443333222 2233333456779999999999999999999
Q ss_pred HHHHHhccC
Q 000993 680 ATELLQDAL 688 (1196)
Q Consensus 680 a~eiL~~~~ 688 (1196)
+.+++++.+
T Consensus 292 ~~~ll~~l~ 300 (327)
T 2yfx_A 292 FAIILERIE 300 (327)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999753
No 235
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.9e-36 Score=348.97 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=200.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 378999999999999999999986 45788999998743 3344567799999999999 99999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 113 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 152 (334)
T 2pvf_A 113 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152 (334)
T ss_dssp ----------------------------------------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred ----------------------------------------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence 345699999997 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~ 219 (334)
T 2pvf_A 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 219 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-------------EECCSCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-------------ccccCCC
Confidence 389999999999999999999999999999999999999999999999999986532210 1112344
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+|+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++.+.++|++||
T Consensus 220 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 296 (334)
T 2pvf_A 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 296 (334)
T ss_dssp CCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHc
Confidence 67899999999987 568999999999999999986 6765544443322 22 22223333456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 297 ~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 297 HAVPSQRPTFKQLVED 312 (334)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999975
No 236
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6e-37 Score=372.92 Aligned_cols=247 Identities=22% Similarity=0.296 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.++..||||+++.... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 287 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 287 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEec--------
Confidence 3689999999999999999999998899999999874332 35679999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 288 --------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 288 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235699999997 6999999764 45899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~s 400 (495)
T 1opk_A 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 400 (495)
T ss_dssp HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--------------EECCTTCCCCGGGCCHHHHHH-CEECHHH
T ss_pred hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--------------eeecCCCcCCcceeCHhHHhc-CCCCcHH
Confidence 9999999999999999999999999999998653211 111233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+... .+. ....++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999996 676544333322 222 222233344567899999999999999999999999863
No 237
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-36 Score=340.22 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=201.5
Q ss_pred CCceEEe-eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+ .||+|+||.||+|.+. .++..||||+++.. ......+.+.+|+.+++.++||||+++++++ +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~------ 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-Q------ 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-E------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-c------
Confidence 5677777 9999999999999864 46889999999754 3344567899999999999999999999887 1
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 126 (287)
T 1u59_A 81 ----------------------------------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126 (287)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1236999999975 999998644 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||+++.++.+||+|||+++........ ........||+.|+|||++.+ ..++.+
T Consensus 127 H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 193 (287)
T 1u59_A 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 193 (287)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce------------eeccccccccccccCHHHhcc-CCCCch
Confidence 9999999999999999999999999999999865322110 111234467899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....++.....++++.++|.+||+.||.+||++.+++++
T Consensus 194 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh--cCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999996 776655444333222 233333445667899999999999999999999999986
No 238
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.7e-36 Score=337.92 Aligned_cols=243 Identities=27% Similarity=0.368 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+++.++||||+++++++.+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 79 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------- 79 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC---------
Confidence 68999999999999999999986 677899999875432 34678999999999999999999987621
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...|+||||++ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 80 --------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (279)
T 1qpc_A 80 --------------------------------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127 (279)
T ss_dssp --------------------------------SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23589999996 59999997543 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++|
T Consensus 128 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 192 (279)
T 1qpc_A 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKSD 192 (279)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--------------ECCTTCCCCTTTSCHHHHHH-CEECHHHH
T ss_pred CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc--------------ccccCCCCccCccChhhhcc-CCCCchhh
Confidence 9999999999999999999999999999986532210 11233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||+++|||++ ||......+....... ...+......++.+.+||.+||+.||.+|||+.++++
T Consensus 193 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc--ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9999999999996 7766555444333222 2222333456779999999999999999999999986
No 239
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.6e-36 Score=345.70 Aligned_cols=253 Identities=27% Similarity=0.388 Sum_probs=199.6
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y-~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++| ++++.||+|+||+||+|.+ ..+|+.||||+++.. ........+.+|+.+|+.++||||+++++++.+.
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA--- 105 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---
Confidence 344 9999999999999988865 347899999999743 3345567799999999999999999999988542
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++... .+++..++.++.||+.||+|
T Consensus 106 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~ 149 (318)
T 3lxp_A 106 -----------------------------------GAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAY 149 (318)
T ss_dssp -----------------------------------TTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHH
Confidence 2357899999997 5999998764 49999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++.
T Consensus 150 LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~ 216 (318)
T 3lxp_A 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE------------YYRVREDGDSPVFWYAPECLKE-YKFYY 216 (318)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS------------EEEC---CCCCGGGCCHHHHHH-CEEEH
T ss_pred HHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc------------ccccccCCCCCceeeChHHhcC-CCCCc
Confidence 9999999999999999999999999999999986532210 0111234568899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH-------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ-------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~-------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
++|||||||++|+|++ ||....... ............++.....++++.+||++||+.||.+||
T Consensus 217 ~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 296 (318)
T 3lxp_A 217 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCc
Confidence 9999999999999997 554332211 111122223334444556778999999999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.++++.
T Consensus 297 s~~ell~~ 304 (318)
T 3lxp_A 297 TFENLIPI 304 (318)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
No 240
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=100.00 E-value=4.6e-36 Score=360.00 Aligned_cols=325 Identities=11% Similarity=0.029 Sum_probs=256.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRPD 808 (1196)
.++|++|++|.++.+++.|++.+++.|+++||++|.||+| ++.. +.+.+.++||+|.|.+ |+.++|||+
T Consensus 32 ~~~G~~d~lP~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~~d~g~~~l~~~l~LRP~ 111 (477)
T 1hc7_A 32 PVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPT 111 (477)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSC
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEEECCCCccCCCeEEEcCC
Confidence 4799999999999999999999999999999999999999 3322 2456789999999987 899999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecCC-CCC--CCcceeEeEEEEeCCCCccchHHHHHH---HHHHH-HHcC
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRAI-GHS--PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TRFF 877 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~-~~~--~~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L-~~lg 877 (1196)
.|++++|+++.+ +..|+|+||+|+|||+|. +++ |.|||+|+|+|+||.....+|+|++.+ +.+++ +.||
T Consensus 112 ~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~~~~ad~E~~~~l~~~~~i~~~~Lg 191 (477)
T 1hc7_A 112 SETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA 191 (477)
T ss_dssp SHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988874 346999999999999984 555 666799999999999999999998776 89999 8999
Q ss_pred CCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 000993 878 HAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 957 (1196)
Q Consensus 878 i~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 957 (1196)
+. +.+.+++. .++. .
T Consensus 192 l~--~~~~~~~~--------------------------~e~~---------------------~---------------- 206 (477)
T 1hc7_A 192 IP--VIEGLKTE--------------------------KEKF---------------------A---------------- 206 (477)
T ss_dssp CC--CEEEECCT--------------------------TTSC---------------------T----------------
T ss_pred Ce--EEEEeCCh--------------------------HHhc---------------------C----------------
Confidence 95 89988861 0100 0
Q ss_pred hcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 958 FCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 958 ~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
|.. ....+|.-+.-|..||+|++|+. +. +.+.+.|
T Consensus 207 --g~~--------------------------------~~~~ie~~~~dgr~~~~gt~~~l---g~--------~~s~~~g 241 (477)
T 1hc7_A 207 --GAV--------------------------------YTTTIEALMKDGKALQAGTSHYL---GE--------NFARAFD 241 (477)
T ss_dssp --TSS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---ET--------HHHHHTT
T ss_pred --Ccc--------------------------------cceEEEEEcCCCcEEEEeeeEEc---cc--------ccccccC
Confidence 000 00111111111345799999986 21 1368999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCCC----chHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGGG----GLLVER 1107 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~~----~~~~~a 1107 (1196)
+||++. -| ....++++||++| +|++.+|.+ +...+...+|.+|+|++.+.+ ....+|
T Consensus 242 ~~y~~~---~G---------~~~~~~~~~~Gig-eRli~~lie~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~~~~~~a 308 (477)
T 1hc7_A 242 IKFQDR---DL---------QVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAA 308 (477)
T ss_dssp CEEECT---TS---------CEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCCTTTHHHHHHHH
T ss_pred eEEECC---CC---------CEEeeeEeeccHH-HHHHHHHHHHhCccccccCCcccCCceEEEEEcCCcchHHHHHHHH
Confidence 999864 12 2223678999999 999988842 222222336789999998622 468899
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1108 ~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
.+++++||+.|++|+++...+.++++++++|++.|+|++|+||++|+++|+|+||+++ ++|..++++++++.|++.++.
T Consensus 309 ~~l~~~Lr~~Gi~v~~D~~~~~s~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~-~eq~~v~~~el~~~l~~~l~~ 387 (477)
T 1hc7_A 309 QGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRL-GGKETLPLAALPEALPGKLDA 387 (477)
T ss_dssp HHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETT-SCCCEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeCCCCCCHHHHHHHHhhcCCCEEEEECcchhcCCEEEEEEec-CceEEEeHHHHHHHHHHHHHH
Confidence 9999999999999998765357999999999999999999999999999999999999 999999999999999877764
Q ss_pred h
Q 000993 1188 Q 1188 (1196)
Q Consensus 1188 ~ 1188 (1196)
.
T Consensus 388 ~ 388 (477)
T 1hc7_A 388 F 388 (477)
T ss_dssp H
T ss_pred H
Confidence 3
No 241
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.6e-36 Score=339.82 Aligned_cols=241 Identities=24% Similarity=0.391 Sum_probs=191.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 86 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 86 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-------
Confidence 578999999999999999999885 8999999986432 356789999999999999999999886431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||+++ +|.+++..... +++..++.++.||+.||+|||
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 87 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 2356999999975 99999976543 899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 195 (278)
T 1byg_A 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 195 (278)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred hCCccccCCCcceEEEeCCCcEEEeecccccccccc------------------ccCCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999754211 122367889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|||++ ||............ . ....+......++.+.++|++||+.||.+|||+.++++.
T Consensus 196 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-T-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 99999999999986 66654433332222 2 222233344567899999999999999999999999863
No 242
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=357.14 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=190.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..|.+.+.||+|+||+||+|++..++ ..||||.++.. .......++.+|+.+++.++||||++++++|.+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 162 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 162 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-----
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Confidence 45888999999999999999986443 46899988642 3344567899999999999999999999987432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 163 ----------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 208 (373)
T 3c1x_A 163 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208 (373)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 234689999997 5999999765 4589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 209 H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 276 (373)
T 3c1x_A 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 276 (373)
T ss_dssp HHTTCCCSCCCGGGEEECTTCCEEECCC--------------------------------CCGGGSCHHHHHH-CCCCHH
T ss_pred HHCCEecCccchheEEECCCCCEEEeecccccccccccccc-----------ccccCCCCCcccccChHHhcC-CCCCcH
Confidence 99999999999999999999999999999998653221100 112234568899999999987 578999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 277 ~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 665443333322222 222233334567789999999999999999999999975
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2e-36 Score=362.25 Aligned_cols=254 Identities=30% Similarity=0.455 Sum_probs=188.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|...+.||+|+||+||.+ ...+|+.||||++... ..+.+.+|+.+|+.+ +|||||++++++.
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------- 79 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSET--------- 79 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE---------
T ss_pred heeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEe---------
Confidence 45566788999999999875 4558999999998642 245678999999886 8999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCC-------CHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHF-------DKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l-------~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+|+|.+++...... ++..++.++.||+.||
T Consensus 80 -------------------------------~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL 128 (434)
T 2rio_A 80 -------------------------------TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128 (434)
T ss_dssp -------------------------------CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHH
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHH
Confidence 24578999999999999999865433 2334578999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-------------CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
+|||++||+||||||+|||++.+ +.+||+|||+|+........ ........+||+.
T Consensus 129 ~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~-----------~~~~~~~~~gt~~ 197 (434)
T 2rio_A 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS-----------FRTNLNNPSGTSG 197 (434)
T ss_dssp HHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------CCT
T ss_pred HHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcc-----------ceeeecCCCCCCC
Confidence 99999999999999999999754 47999999999865422100 0111234589999
Q ss_pred CCCchhccC------CCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCC----ccccCCHHHHHH
Q 000993 600 YTAPEIEQG------WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESL 665 (1196)
Q Consensus 600 Y~APE~l~~------~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~----~~~~~~~~l~~L 665 (1196)
|+|||++.+ ...++.++|||||||++|||++ ||......... .+......+. .....++++.+|
T Consensus 198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~l 275 (434)
T 2rio_A 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDL 275 (434)
T ss_dssp TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HHHTCCCCCCCTTCCCHHHHHHHHHH
T ss_pred ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--HhcCCCCcccccccccccchHHHHHH
Confidence 999999875 2458999999999999999996 77654333321 1221212211 112234688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|.+||+.||.+|||+.++++||||....
T Consensus 276 i~~~L~~dP~~Rps~~eil~hp~f~~~~ 303 (434)
T 2rio_A 276 ISQMIDHDPLKRPTAMKVLRHPLFWPKS 303 (434)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGSCHH
T ss_pred HHHHhhCChhhCCCHHHHHhCCccCCcH
Confidence 9999999999999999999999997654
No 244
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.3e-36 Score=362.28 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|+.+|+.++||||+++++++.+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 250 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 250 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------
Confidence 368999999999999999999997 456799999875432 24679999999999999999999988621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 251 ---------------------------------~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 251 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23589999996 599999974 356999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 298 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 362 (452)
T 1fmk_A 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 362 (452)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce--------------ecccCCcccccccCHhHHhc-CCCCccc
Confidence 99999999999999999999999999999986532210 11223457889999999987 5789999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+...... .+..++.....++.+.+||.+||+.||.+|||++++++.
T Consensus 363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999997 777665555443332 222233334567889999999999999999999999863
No 245
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-36 Score=376.41 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=197.4
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
++||+|+||.||+|.+. .+++.||||+++.........+.+.+|+.+|+.++|||||+++++|.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------------- 440 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-------------- 440 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--------------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--------------
Confidence 47999999999999654 56789999999765555555678999999999999999999998872
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+++|||||+ |+|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 441 ---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHr 493 (635)
T 4fl3_A 441 ---------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493 (635)
T ss_dssp ---------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ---------------------------cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCC
Confidence 123689999997 5999999988889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+|+.+...... ........+|+.|+|||++.+ ..++.++|||||||
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~------------~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv 560 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENY------------YKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 560 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------CGGGSCHHHHHH-CCCCHHHHHHHHHH
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccc------------cccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHH
Confidence 99999999999999999999999876432110 111234467899999999987 57999999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 624 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 624 iLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+||||++ ||......+...... ....++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 561 ~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 561 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999996 887666555443332 233333344567899999999999999999999999864
No 246
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.4e-37 Score=353.09 Aligned_cols=252 Identities=26% Similarity=0.330 Sum_probs=196.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|+++ +|+.||||++... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 106 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDE------ 106 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC------
T ss_pred HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34578999999999999999999975 7999999987643 23346779999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 107 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l 152 (321)
T 2qkw_B 107 ----------------------------------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152 (321)
T ss_dssp ----------------------------------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHH
Confidence 345699999997 59999886543 589999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 153 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~ 218 (321)
T 2qkw_B 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-------------THLSTVVKGTLGYIDPEYFIK-GRL 218 (321)
T ss_dssp HHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-------------CCCBCCCEEETTTCCHHHHHH-CBC
T ss_pred HHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-------------cccccccCCCccccCHHHhcC-CCC
Confidence 999999999999999999999999999999999975421110 011234569999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH-----HHHHHhhhcCCC--------C-CccccCCHHHHHHHHHcccCCCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGEL--------P-PSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~-----~~~~~l~~~~~~--------p-~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
+.++|||||||++|||++ ||....+.. ...........+ . ......+..+.+++.+||+.||.
T Consensus 219 ~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 298 (321)
T 2qkw_B 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298 (321)
T ss_dssp CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999996 665322110 000000001111 0 11122334688999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+|||+.+++++
T Consensus 299 ~Rps~~ell~~ 309 (321)
T 2qkw_B 299 DRPSMGDVLWK 309 (321)
T ss_dssp GSCCHHHHHHH
T ss_pred cCcCHHHHHHH
Confidence 99999999976
No 247
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=343.66 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 114 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--- 114 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---
Confidence 46899999999999999999994 568999999998643 344567899999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+++||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 115 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 115 -----------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp --------------------------------------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 1235789999997 5999999875 46999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 160 ~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 226 (326)
T 2w1i_A 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE------------YYKVKEPGESPIFWYAPESLTE-SKFS 226 (326)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS------------EEECSSCCSCCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc------------ccccccCCCCceeEECchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0011233467889999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
.++|||||||++|||++ ||...... ......+. ....++.....++++.+||++||+.||.
T Consensus 227 ~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSGG
T ss_pred chhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh-cCCCCCCCCcccHHHHHHHHHHcCCChh
Confidence 99999999999999997 44322110 01111222 2223333455678999999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+|||+.++++.
T Consensus 306 ~Rps~~el~~~ 316 (326)
T 2w1i_A 306 QRPSFRDLALR 316 (326)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999864
No 248
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=359.42 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|.+.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++.+.
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------- 79 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------- 79 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-------
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-------
Confidence 4689999999999999999999999999999999974322 22356788999999999999999999887432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 80 -------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L 128 (396)
T 4eut_A 80 -------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128 (396)
T ss_dssp -------------------------------TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 1346799999996 59999997643 399999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--
Q 000993 536 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-- 609 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-- 609 (1196)
|++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~ 192 (396)
T 4eut_A 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAVL 192 (396)
T ss_dssp HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG----------------GSSCSSSCCTTCCHHHHHHHCC
T ss_pred HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC----------------ccccccCCccccCHHHhhcccc
Confidence 99999999999999999 777789999999998653221 12345799999999998641
Q ss_pred -----CCCCCcchhHHHHHHHHHhhc---CCchh----HHHHHHHHHhhhcCC-------------------CCCc---c
Q 000993 610 -----PKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPPS---W 655 (1196)
Q Consensus 610 -----~~~s~ksDVwSlGviLyELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~~---~ 655 (1196)
..++.++|||||||++|||++ ||... ...+.....+..... .+.. .
T Consensus 193 ~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (396)
T 4eut_A 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLS 272 (396)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSC
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccc
Confidence 246789999999999999996 77532 223333333332211 0100 0
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
....+.+.++|++||+.||.+|||+.+++++
T Consensus 273 ~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 273 RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred hHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 1122467899999999999999999999864
No 249
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.6e-36 Score=339.54 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=193.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~--~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|++.. +++ .||||+++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 4789999999999999999999753 333 689999875432 23456789999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 93 -------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 135 (291)
T 1u46_A 93 -------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135 (291)
T ss_dssp -------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHH
Confidence 12589999997 5999988764 56999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 136 ~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 202 (291)
T 1u46_A 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD------------HYVMQEHRKVPFAWCAPESLKT-RTFS 202 (291)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC------------EEEC-----CCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc------------chhhhccCCCCceeeCchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0111234568889999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++||||||+++|+|++ ||......+....... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 203 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 203 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc-cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 99999999999999996 7766655554444333 333344445677899999999999999999999999874
No 250
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3e-37 Score=353.80 Aligned_cols=251 Identities=25% Similarity=0.328 Sum_probs=193.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++. +|+.||||++...... .....+.+|+.+++.++||||++++++|..
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 98 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 98 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECC--------
T ss_pred hhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEec--------
Confidence 468899999999999999999865 7999999998754321 122368899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL~y 534 (1196)
....++|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 99 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 146 (326)
T 3uim_A 99 --------------------------------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146 (326)
T ss_dssp --------------------------------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 334589999996 49999997543 49999999999999999999
Q ss_pred HHhC---CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQ---GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~---gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++ ||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..
T Consensus 147 lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~ 211 (326)
T 3uim_A 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--------------THVTTAVRGTIGHIAPEYLST-GK 211 (326)
T ss_dssp HHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS--------------SCEECCCCSCGGGCCHHHHHH-SE
T ss_pred HHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc--------------ccccccccCCcCccCHHHhcc-CC
Confidence 9999 99999999999999999999999999998653211 011233569999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-------HHHHHHhhhcCCC---------CCccccCCHHHHHHHHHcccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-------QIVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-------~~~~~~l~~~~~~---------p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
++.++|||||||++|||++ ||...... ............. +......++.+.+++.+||+.
T Consensus 212 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 291 (326)
T 3uim_A 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291 (326)
T ss_dssp ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCc
Confidence 8999999999999999997 77532210 0001110001100 011112235788999999999
Q ss_pred CCCCCCCHHHHHhcc
Q 000993 673 SPSDRPSATELLQDA 687 (1196)
Q Consensus 673 dP~~RPta~eiL~~~ 687 (1196)
||.+|||+.+++++.
T Consensus 292 dP~~Rps~~ell~~L 306 (326)
T 3uim_A 292 SPMERPKMSEVVRML 306 (326)
T ss_dssp CGGGSCCHHHHHHHH
T ss_pred CCccCCCHHHHHHHh
Confidence 999999999999874
No 251
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=344.17 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=187.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH--HHhcCCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT--LSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i--L~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|..+ ++.++||||+++++.+....
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-- 80 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVT-- 80 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC--
T ss_pred cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccc--
Confidence 3468999999999999999999977 58999999987432 2334444444 45589999999997663211
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|+|||||+ |+|.+++... ..++..++.++.||+.||+|
T Consensus 81 ---------------------------------~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~ 126 (336)
T 3g2f_A 81 ---------------------------------ADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAY 126 (336)
T ss_dssp ---------------------------------TTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHH
Confidence 012456899999996 5999999654 45889999999999999999
Q ss_pred HHhC---------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 535 IHGQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 535 LHs~---------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
||++ ||+||||||+|||++.++.+||+|||+++.+........ ..........+||+.|+|||+
T Consensus 127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~ 199 (336)
T 3g2f_A 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP-------GEEDNAAISEVGTIRYMAPEV 199 (336)
T ss_dssp HHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC----------------CCTTSCGGGCCHHH
T ss_pred HHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc-------cccccccccCCCccceeCchh
Confidence 9999 999999999999999999999999999986543221100 001112345679999999999
Q ss_pred ccCC------CCCCCcchhHHHHHHHHHhhc---CCchhHH-----------------HHHHHHHhhh---cCCCCCccc
Q 000993 606 EQGW------PKIDEKADMYSLGIVFFELWH---PFSTAME-----------------RQIVLSDLKQ---KGELPPSWV 656 (1196)
Q Consensus 606 l~~~------~~~s~ksDVwSlGviLyELlt---Pf~~~~~-----------------~~~~~~~l~~---~~~~p~~~~ 656 (1196)
+.+. ..++.++|||||||++|||++ ||..... .......... ...+|..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T 3g2f_A 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279 (336)
T ss_dssp HTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC
T ss_pred hcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc
Confidence 9862 235678999999999999985 4322110 0111111111 122233222
Q ss_pred c---CCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 657 A---KFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 657 ~---~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
. .++.+.+||.+||+.||.+|||+.++++.
T Consensus 280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 280 ENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 2 23478999999999999999999999863
No 252
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=345.64 Aligned_cols=253 Identities=25% Similarity=0.348 Sum_probs=195.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++.. .+|+|+++...........+.+|+.+++.++||||+++++++.+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 100 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS------- 100 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-------
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------
Confidence 35789999999999999999999863 49999987654443344567889999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 101 ---------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 101 ---------------------------------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp ---------------------------------SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997655 6999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--------
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-------- 608 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------- 608 (1196)
++||+||||||+|||++ ++.+||+|||+++......... .........||+.|+|||++.+
T Consensus 148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 216 (319)
T 2y4i_B 148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR----------REDKLRIQNGWLCHLAPEIIRQLSPDTEED 216 (319)
T ss_dssp HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CC
T ss_pred hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc----------cccccccCCCcccccChHHhhhcccccccc
Confidence 99999999999999998 6899999999987643211100 0111234569999999999875
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||.............. ....+......++++.++|.+||+.||.+|||+.++++
T Consensus 217 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 217 KLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT-GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT-TCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc-CCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2347889999999999999996 8876655544433322 22222222345668999999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
.
T Consensus 296 ~ 296 (319)
T 2y4i_B 296 M 296 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 253
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=370.27 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=196.4
Q ss_pred CCceEEe-eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++.+.+ .||+|+||.||+|.++. ++..||||+++... .....+.+.+|+.+|+.++|||||+++++|..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------
Confidence 4556666 89999999999998863 46679999987542 33456789999999999999999999998721
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+|+|||||+ |+|.+++... ..+++..++.++.||+.||+||
T Consensus 408 -----------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L 452 (613)
T 2ozo_A 408 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452 (613)
T ss_dssp -----------------------------------SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 23799999997 5999998754 4699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++.+...... ........+|+.|+|||++.+ ..++.+
T Consensus 453 H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~------------~~~~~~~~~~~~y~APE~~~~-~~~~~~ 519 (613)
T 2ozo_A 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 519 (613)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------CCTTSCHHHHHH-CCCCHH
T ss_pred HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce------------eeeccCCCCccceeCHhhhcC-CCCCcH
Confidence 9999999999999999999999999999999865322100 011123456789999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||+||||++ ||......+...... .+..++.....++++.+||.+||+.||.+||++.++++.
T Consensus 520 sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999996 787665555443332 233333344567899999999999999999999999863
No 254
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-35 Score=364.84 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=200.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|+.+|+.++|||||++++++.+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 333 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 333 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee--------
Confidence 368999999999999999999997 456799999975432 24679999999999999999999988621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+|||||||. |+|.+++... ..+++.+++.++.||+.||+|||
T Consensus 334 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 334 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp ---------------------------------SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23689999997 5999999743 56999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .......+|..|+|||++.+ ..++.++
T Consensus 381 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 445 (535)
T 2h8h_A 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 445 (535)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH--------------HTTCSTTSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce--------------ecccCCcCcccccCHHHhcc-CCCCchh
Confidence 99999999999999999999999999999986542211 11233467889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+...... .+...+....+++.+.+||.+||+.||.+|||+.+|++.
T Consensus 446 DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999997 777665555443332 222223334567789999999999999999999999863
No 255
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-35 Score=340.59 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=189.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc--CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L--~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++..+ +||||+++++++....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~- 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT- 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-
Confidence 445579999999999999999999886 999999998632 234455566666554 9999999999885421
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+
T Consensus 105 -----------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~ 148 (337)
T 3mdy_A 105 -----------------------------------GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLC 148 (337)
T ss_dssp -----------------------------------GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHH
Confidence 123578999999975 99999965 46999999999999999999
Q ss_pred HHHhC--------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 534 HIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 534 yLHs~--------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|||++ ||+||||||+|||++.++.+||+|||+++........ ........+||+.|+|||+
T Consensus 149 ~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~ 217 (337)
T 3mdy_A 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-----------VDIPPNTRVGTKRYMPPEV 217 (337)
T ss_dssp HHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--------------------CCSSCSCGGGCCHHH
T ss_pred HHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc-----------ccCCCCCCccCcceeChhh
Confidence 99999 9999999999999999999999999999765322111 1112235689999999999
Q ss_pred ccCCCCCCCc------chhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCC---CCCcc--cc
Q 000993 606 EQGWPKIDEK------ADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VA 657 (1196)
Q Consensus 606 l~~~~~~s~k------sDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~ 657 (1196)
+.+. .+... +|||||||++|||++ ||.... .............. .|..+ ..
T Consensus 218 ~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (337)
T 3mdy_A 218 LDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDE 296 (337)
T ss_dssp HTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSH
T ss_pred cccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhH
Confidence 9873 34444 999999999999985 232211 11111122211111 22211 13
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++++.+||.+||+.||.+|||+.+++++
T Consensus 297 ~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 297 CLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 34578999999999999999999999986
No 256
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=100.00 E-value=1.4e-36 Score=365.59 Aligned_cols=363 Identities=13% Similarity=0.108 Sum_probs=258.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.++|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+| |++|+.++||||+|+++
T Consensus 37 ~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~-d~~~~~l~LRP~~t~~i 115 (471)
T 3a32_A 37 TGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF-DIEGHEFAVKPMNCPYH 115 (471)
T ss_dssp HCTTCCCBCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE-EETTEEEEECSCSHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE-ecCCcEEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 332 2345678999999 99999999999999999
Q ss_pred HHHHHhC----C---CCceeEEEecCeeecCCCC--C---CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHH-cCC
Q 000993 814 IRWAISN----Q---KSSFKRYEISSVYRRAIGH--S---PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTR-FFH 878 (1196)
Q Consensus 814 aR~~a~~----~---~~P~r~~Y~G~VfR~e~~~--~---~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~-lgi 878 (1196)
+|+++++ + ..|+|+||+|+|||+|.++ . |.+||+|+|+|+||..+..+| +|+|.++.++|+. ||+
T Consensus 116 ~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~~~~~de~~e~i~~~~~~l~~~lGl 195 (471)
T 3a32_A 116 ILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKL 195 (471)
T ss_dssp HHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhhhhhccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcChHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9998874 3 6799999999999998866 4 456799999999999999999 9999999999999 999
Q ss_pred ----CCceEEEeCcHH--HH-HHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHH
Q 000993 879 ----AESCDIHLNHGD--LL-EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 951 (1196)
Q Consensus 879 ----~~~~~i~Lg~~~--i~-~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l 951 (1196)
.+ +.|.+||+. ++ +. .+|..+.+.+.. ..+. +.+ +..+...++.....+.+
T Consensus 196 ~~~~~~-~~l~i~~~~~~~~~e~---~~g~~~~~d~~~-~~l~----------------~~~-~~~l~~~~~~~~~~~~~ 253 (471)
T 3a32_A 196 GVSSET-FKVRLSMSDKSLIGKE---FMGSKEEWEGAE-EALR----------------EAA-SRINEKYGIDIVELEGE 253 (471)
T ss_dssp CCSTTT-EEEEEECCCGGGBTTT---BCSCHHHHHHHH-HHHH----------------HHH-HHHHHHHCCEEEEETTC
T ss_pred CcCCCC-eEEEEecCCCCccccc---ccCCHHHHHHHH-HHHH----------------HHH-HHHHHhcCCceEecccc
Confidence 65 999999973 11 11 123221111000 0000 001 11111122221111111
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCC--Ccc----ceEEEEEecCCCCc
Q 000993 952 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES--YHR----NLFFQVFSVKEKYP 1025 (1196)
Q Consensus 952 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~--YYT----G~vFe~~~~~~~~~ 1025 (1196)
.+++ |+. +...+..+. .++.++ ...| .+.+|++++|+++ ||| |++ +.+.-+ .
T Consensus 254 ~~~~----gp~------i~~~l~d~~---~~l~~~--~~~g---~~~lD~~l~r~~d~~Yyt~~~~G~~-e~~~i~--~- 311 (471)
T 3a32_A 254 AAFY----GPK------LDFIMMVEE---SGVSKE--WQMG---TIQFDFNLPRRFRLYDVVREEFGIE-EVYIIH--R- 311 (471)
T ss_dssp SBTT----BCE------EEEEEEEES---SSCEEE--EEEE---EEEEESSHHHHTTHHHHHHHHHCCS-CEEEEE--E-
T ss_pred hhhC----CCc------cceEEeccH---Hhhhhh--heee---eEEecccccccCCceEeccccCCce-eeEEEe--c-
Confidence 0111 110 000000000 000000 0022 5899999999999 999 998 664321 0
Q ss_pred cccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHh-hccC-CCCCCCCCCCceEEEEEcCC---
Q 000993 1026 ATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ-HYPV-DFKPVRNEAGTSVLVCSRGG--- 1100 (1196)
Q Consensus 1026 ~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~-~L~~-~~~~~~~~~~~~vlv~~~~~--- 1100 (1196)
+ ..| |+|||+. +++. +...+...++.+|+|++.+.
T Consensus 312 -------~------------------------------i~G---gieRli~~lie~~~g~~p~~~ap~qv~Iip~~~~~~ 351 (471)
T 3a32_A 312 -------A------------------------------LLG---SIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGE 351 (471)
T ss_dssp -------E------------------------------EEE---EHHHHHHHHHHHTTTCCCGGGCSCSEEEEEEECSST
T ss_pred -------c------------------------------ccC---cHHHHHHHHHHHhCCCCCCCcCCceEEEEEccCccc
Confidence 0 112 7899985 4443 21111123578899988742
Q ss_pred --CchHHHHHHHHHHHHHcCCeEEEee-CCCCCHHHHHHHHH-HCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccch
Q 000993 1101 --GGLLVERMELVAELWEENIKAQFVP-VPDPSLTEQYEYAS-EHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQR 1174 (1196)
Q Consensus 1101 --~~~~~~a~~~a~~Lr~~Gi~vel~~-~~~~~l~k~~~~A~-~~g~~~~iiig~~E~~~g~v~vk~l~~g~--q~~v~~ 1174 (1196)
+....+|.+++++||++|++|+++. . +.++++++++|+ +.|+|++|+||++|+++|+|+||++++++ +..+++
T Consensus 352 ~~~~~~~~a~~i~~~Lr~~Gi~v~~D~~~-~~~~g~k~~~a~~~~gip~~iiiG~~e~~~~~V~vr~r~~~~q~~~~v~~ 430 (471)
T 3a32_A 352 VDREIEDLASSIAKGLLDKGFRVAVKGSS-KTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAI 430 (471)
T ss_dssp THHHHHHHHHHHHHHHHHTTCEEEEEEEE-TTTHHHHHHHHHHTTCCSEEEEECHHHHHHTEEEEEEEETTTTEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEecCC-CCCHHHHHHHHHHhcCCCEEEEECchhhhCCEEEEEECCCCccceEEEee
Confidence 3467889999999999999999888 5 569999999999 99999999999999999999999999998 578888
Q ss_pred H-----HHHHHHHHHHHhh
Q 000993 1175 E-----SLVRFLLDAIASQ 1188 (1196)
Q Consensus 1175 ~-----el~~~l~~~l~~~ 1188 (1196)
+ ++++.|.+.+...
T Consensus 431 ~~~~~~~~~~~~~~~~~~~ 449 (471)
T 3a32_A 431 AYGDAADAVENLAAVAEEL 449 (471)
T ss_dssp ECSSHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHH
Confidence 8 7877776665543
No 257
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.4e-35 Score=353.14 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=198.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.++||+|+||.||+|++..+++.||||++...... .++.+|+.+++.++|++++..+..|..
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~------- 73 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGV------- 73 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEE-------
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEe-------
Confidence 457899999999999999999999999999999998755432 247889999999988665555444321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....|||||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~ 121 (483)
T 3sv0_A 74 --------------------------------EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 121 (483)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456799999998899999975 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||| +.++.+||+|||+++.+.......... .......+||+.|+|||++.+ ..++.
T Consensus 122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~--------~~~~~~~~gt~~Y~aPE~~~~-~~~s~ 192 (483)
T 3sv0_A 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP--------YRENKNLTGTARYASVNTHLG-IEQSR 192 (483)
T ss_dssp TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCCCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccc--------cccccccCCCccccCHHHhcC-CCCCh
Confidence 999999999999999 688999999999998764322111000 112345689999999999998 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||||||+||||++ ||..... .+........ ...........++++.+||.+||+.||.+||++.+|++
T Consensus 193 ~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 193 RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999996 7764321 1111111111 11111122345678999999999999999999999875
No 258
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-35 Score=336.27 Aligned_cols=245 Identities=23% Similarity=0.350 Sum_probs=190.0
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
..+.||+|+||.||+|.+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------- 101 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----------- 101 (307)
T ss_dssp TCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------
T ss_pred cCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec-----------
Confidence 347899999999999986 58999999986532 223456789999999999999999999998732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~---~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 102 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 152 (307)
T 2nru_A 102 -----------------------------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152 (307)
T ss_dssp -----------------------------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 235689999996 699998864 34699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ .++.++||
T Consensus 153 ~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~--~~~~~~Dv 217 (307)
T 2nru_A 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-------------TVMTSRIVGTTAYMAPEALRG--EITPKSDI 217 (307)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-------------CEECSSCCSCGGGCCHHHHTT--EECTHHHH
T ss_pred CeecCCCCHHHEEEcCCCcEEEeecccccccccccc-------------cccccccCCCcCcCChHHhcC--CCCccchh
Confidence 999999999999999999999999999976432110 011234579999999999876 48999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHH---HHHHhhh---------cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQI---VLSDLKQ---------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~---~~~~l~~---------~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
|||||++|+|++ ||........ ....... ....+......+..+.+++.+||+.||.+|||+.++
T Consensus 218 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 297 (307)
T 2nru_A 218 YSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297 (307)
T ss_dssp HHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 999999999997 6654322110 0111110 011122222334578899999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
+++
T Consensus 298 ~~~ 300 (307)
T 2nru_A 298 QQL 300 (307)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 259
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=100.00 E-value=2.1e-36 Score=377.57 Aligned_cols=355 Identities=11% Similarity=0.063 Sum_probs=255.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCC-ceEeecCCCcHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGG-DLLELSHELRLP 812 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G-~~laLRPD~T~~ 812 (1196)
.+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++++.+.++||+|.|.+| +.++|||+.|++
T Consensus 259 ~~~G~~~~lP~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~~d~~~~~~~~LrP~~~~~ 338 (645)
T 1nyr_A 259 VGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPH 338 (645)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHH
T ss_pred CCCceeEECCCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCcceeEecCCCeEEEeCCCCCHH
Confidence 3789999999999999999999999999999999999999 222 234567899999999999 999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+| +|+|.++.++|+.||+++
T Consensus 339 ~~~~~~~~~~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~~~~~d~~~e~i~~~~~~l~~lGl~~- 417 (645)
T 1nyr_A 339 HMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED- 417 (645)
T ss_dssp HHHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHhhhhhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 999998753 4699999999999999886 2 566799999999999999999 999999999999999975
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.+|++... ..-..+|..+.|.... ..+ ++.
T Consensus 418 ~~~~l~~~~~~-~~e~~~g~~e~~~~~~---------------------~~l-~~~------------------------ 450 (645)
T 1nyr_A 418 YSFRLSYRDPE-DKEKYFDDDDMWNKAE---------------------NML-KEA------------------------ 450 (645)
T ss_dssp EEEEEEECCCC-CSSSSSCCHHHHHHHH---------------------HHH-HHH------------------------
T ss_pred EEEEEeCCCcc-cchhhcCChHHHHHHH---------------------HHH-HHH------------------------
Confidence 99999985210 0000112111110000 000 011
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc----ccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL----AVG 1037 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I----~~G 1037 (1196)
+...|+.. ..+.+. +..|+..+.|++. ...+.. ...+++ ..+
T Consensus 451 --------------------------l~~~g~~~--~~~~~~--~~~ygpki~~~~~-d~lg~~---~~~gtiq~D~~l~ 496 (645)
T 1nyr_A 451 --------------------------ADELGLSY--EEAIGE--AAFYGPKLDVQVK-TAMGKE---ETLSTAQLDFLLP 496 (645)
T ss_dssp --------------------------HHHHCCCC--CCEESC--SBTTBCEEEEEEC-CTTSCC---EEEEEEEEESSHH
T ss_pred --------------------------HHHcCCCe--EecCCC--CceeCCccceehh-hhhCch---hhcceEEeecccc
Confidence 11112210 111111 2223332333221 000100 000000 113
Q ss_pred cccc-hhhhhccccccccccCCCCCCCcc---eecccHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCchHHHHHHHH
Q 000993 1038 GRYD-YLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELV 1111 (1196)
Q Consensus 1038 GRYD-~L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a 1111 (1196)
+||| .. ++..|. ...|++ |++.|+||++.+|.+. ...+...+|.+|+|++.+.+....+|.+++
T Consensus 497 ~~~d~~Y---------~~~~g~-~~~P~~ih~~~~GgieR~i~~liE~~~~~~P~~lap~qv~vip~~~~~~~~~a~~i~ 566 (645)
T 1nyr_A 497 ERFDLTY---------IGQDGE-HHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQ 566 (645)
T ss_dssp HHTTCCE---------ECTTSC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHHHHHH
T ss_pred cccceEE---------ECCCCC-ccCcEEEEeccCCcHHHHHHHHHHHhcCCCCCCCCCceEEEEEcccHHHHHHHHHHH
Confidence 4444 12 111221 235888 8888999999776422 122122367899999984146788999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1112 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1112 ~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++||++|++|+++.. +.++++++++|+..|+|++|++|++|+++|+|+||++.+++|..++++++++.|++.++.
T Consensus 567 ~~Lr~~Gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iivG~~e~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~ 641 (645)
T 1nyr_A 567 DELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL 641 (645)
T ss_dssp HHHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTSSCCCEEEHHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhh
Confidence 999999999998876 579999999999999999999999999999999999999999999999999999988764
No 260
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=100.00 E-value=7.8e-35 Score=348.36 Aligned_cols=331 Identities=9% Similarity=0.060 Sum_probs=263.6
Q ss_pred ccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecC----Cc
Q 000993 733 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GD 801 (1196)
Q Consensus 733 ~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~ 801 (1196)
+.+.....++|++|++|.++.+++.|++.+++.|+++||++|.||+| ++. ++.+.+.++||.|.|.+ |+
T Consensus 19 ~li~~~~~~~G~~d~lP~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy~~~d~g~~~~~~ 98 (459)
T 1nj8_A 19 EIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDV 98 (459)
T ss_dssp SSCBCCSTTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEE
T ss_pred CCccccCCCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccccchhhEEEeccCcccCCC
Confidence 33444346799999999999999999999999999999999999999 332 23466789999999987 89
Q ss_pred eEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCC-CC---CCccee-EeEEEEeCCCCccchHH---HHHHH
Q 000993 802 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAE---VLKVT 869 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaE---vI~la 869 (1196)
.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+ |+|+|+||.....+|+| +|.++
T Consensus 99 ~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~~~~~~~a~~e~~~~i~~~ 178 (459)
T 1nj8_A 99 KLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIY 178 (459)
T ss_dssp EEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEEECCHHHHHHHHHHHHHHH
Confidence 9999999999999999864 3569999999999999987 65 445699 99999999998899998 89999
Q ss_pred HHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHH
Q 000993 870 MDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 949 (1196)
Q Consensus 870 ~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~ 949 (1196)
.++++.||+. +.+.+++. .++.
T Consensus 179 ~~~~~~LGl~--~~~~~~~~--------------------------~ek~------------------------------ 200 (459)
T 1nj8_A 179 KKFFDTLGIP--YLISKRPE--------------------------WDKF------------------------------ 200 (459)
T ss_dssp HHHHHHHTCC--CEEEEECT--------------------------TSCC------------------------------
T ss_pred HHHHHHCCCc--eEEeecCc--------------------------hhhc------------------------------
Confidence 9999999995 78877641 0100
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc
Q 000993 950 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1029 (1196)
Q Consensus 950 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~ 1029 (1196)
.|.. ....++.-+.-|..++.|++|+.=
T Consensus 201 ---------~ga~--------------------------------~~~~ie~~~~dg~~~e~gt~~~lg----------- 228 (459)
T 1nj8_A 201 ---------PGAE--------------------------------YTMAFDTIFPDGRTMQIATVHNLG----------- 228 (459)
T ss_dssp ---------TTCS--------------------------------EEEEEEEECTTSCEEEEEEEEEEE-----------
T ss_pred ---------CCcc--------------------------------cceeEEEEcCCCcEEEEEEEeecc-----------
Confidence 0100 011122222236778899988641
Q ss_pred cccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEc-CCC-
Q 000993 1030 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSR-GGG- 1101 (1196)
Q Consensus 1030 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~-~-----~~~~~~~~~~~~vlv~~~-~~~- 1101 (1196)
...+.+.|+||++.- | ....++++||++| +|++.+|. . +...+...+|.+|+|++. +.+
T Consensus 229 ~~~s~~~~~~Y~~~~---G---------~~~~v~~~~~Gig-eRli~alie~~~d~~gl~~P~~laP~qv~Iipi~~~~~ 295 (459)
T 1nj8_A 229 QNFSKTFEIIFETPT---G---------DKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGK 295 (459)
T ss_dssp THHHHHTTCEEECTT---S---------SEEECEEEEEEEC-THHHHHHHHHHCBTTBCCCCTTSCSSSEEEEECCCSSC
T ss_pred cccccccCeEEECCC---C---------CEeeeeEeeccHH-HHHHHHHHHHhCCCceeEcCCcCCCCcEEEEecccCCc
Confidence 123688999999741 2 2224688999999 99998884 2 112222346789999998 522
Q ss_pred --chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHH
Q 000993 1102 --GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVR 1179 (1196)
Q Consensus 1102 --~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~ 1179 (1196)
....+|.+++++||+. ++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++
T Consensus 296 ~~~~~~~a~~l~~~Lr~~-i~v~~D~~-~~~~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~t~eq~~v~~~el~~ 373 (459)
T 1nj8_A 296 EDIVMEKAKEIYEKLKGK-FRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLME 373 (459)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETTTCCEEEEETTSHHH
T ss_pred HHHHHHHHHHHHHHHhhh-cEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhcCCEEEEEECCCCceEEEeHHHHHH
Confidence 5788999999999999 99998876 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 000993 1180 FLLDAIASQ 1188 (1196)
Q Consensus 1180 ~l~~~l~~~ 1188 (1196)
.|++.++..
T Consensus 374 ~l~~~l~~~ 382 (459)
T 1nj8_A 374 VVEKTLNNI 382 (459)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998776654
No 261
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=345.68 Aligned_cols=240 Identities=14% Similarity=0.172 Sum_probs=186.3
Q ss_pred cCCceEEeeeccCCcEEEEEE-----EEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLC-----KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a-----~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||+||+| .+..+++.||||+++.. ....+.+|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 367999999999999999999 46778999999998632 2446778888888886 9999999998743
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-----cCCCCHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-----YDHFDKELAWHLF 525 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-----~~~l~e~~~~~i~ 525 (1196)
....|+|||||+ |+|.+++.. ...+++..++.++
T Consensus 139 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~ 178 (365)
T 3e7e_A 139 ----------------------------------------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178 (365)
T ss_dssp ----------------------------------------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred ----------------------------------------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence 345699999996 699999974 4569999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEecC-----------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld~-----------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+..... ....+..
T Consensus 179 ~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 245 (365)
T 3e7e_A 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-------------GTIFTAK 245 (365)
T ss_dssp HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------TEEECCS
T ss_pred HHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------Cceeeee
Confidence 99999999999999999999999999998 89999999999975431110 0122456
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+||+.|||||++.+ ..|+.++|||||||++|||++ ||....... ......+... .......+++..||+
T Consensus 246 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~l~ 317 (365)
T 3e7e_A 246 CETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CKPEGLFRRL--PHLDMWNEFFHVMLN 317 (365)
T ss_dssp SCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EEECSCCTTC--SSHHHHHHHHHHHHC
T ss_pred cCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----eeechhcccc--CcHHHHHHHHHHHcC
Confidence 89999999999998 569999999999999999997 665433211 0001111111 123467899999999
Q ss_pred CCCCCCCCHHHHHh
Q 000993 672 PSPSDRPSATELLQ 685 (1196)
Q Consensus 672 ~dP~~RPta~eiL~ 685 (1196)
.+|.+|++..+.+.
T Consensus 318 ~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 318 IPDCHHLPSLDLLR 331 (365)
T ss_dssp CCCTTCCCCHHHHH
T ss_pred CCCCCcchHHHHHH
Confidence 99999976444443
No 262
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=100.00 E-value=2.1e-35 Score=366.67 Aligned_cols=356 Identities=11% Similarity=0.036 Sum_probs=263.7
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++ +++.+.+.++||+ .|.+|+.++|||+.|+
T Consensus 257 ~~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~-~d~~~~~~~LrP~~~~ 335 (642)
T 1qf6_A 257 QEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCP 335 (642)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE-EEETTEEEEECSSSHH
T ss_pred ccCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee-eecCCceEEecCCCCH
Confidence 345899999999999999999999999999999999999999 22 2335567899999 9999999999999999
Q ss_pred HHHHHHHhC----CCCceeEEEecCeeecCCC--CC---CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCC
Q 000993 812 PFIRWAISN----QKSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 812 ~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~ 879 (1196)
+++|+++.+ +..|+|+||+|+|||+|.+ +. |.|||+|+|+|+||.+ ..+|+| ++.++.++|+.||+.
T Consensus 336 ~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~-~~~~~e~~~~i~~~~~i~~~lGl~ 414 (642)
T 1qf6_A 336 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE-EQIRDEVNGCIRLVYDMYSTFGFE 414 (642)
T ss_dssp HHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG-GGHHHHHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999874 3469999999999999986 53 4567999999999965 367776 699999999999997
Q ss_pred CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Q 000993 880 ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959 (1196)
Q Consensus 880 ~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~ 959 (1196)
+ +.+.++++. -..+|-.+.|..... ..++++...|++... ..
T Consensus 415 ~-~~v~l~~~~-----e~~~g~~e~w~~a~~----------------------~l~~~l~~~g~~~~~----------~~ 456 (642)
T 1qf6_A 415 K-IVVKLSTRP-----EKRIGSDEMWDRAEA----------------------DLAVALEENNIPFEY----------QL 456 (642)
T ss_dssp C-CEEEEECCC-----SSCCSCHHHHHHHHH----------------------HHHHHHHTTTCCCEE----------ET
T ss_pred c-eEEEEecCc-----ccccCCHHHHHHHHH----------------------HHHHHHHHcCCCcEE----------cC
Confidence 4 999999853 011121111110000 001111111111000 00
Q ss_pred CChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccc
Q 000993 960 GAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1039 (1196)
Q Consensus 960 g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGR 1039 (1196)
|. ...+| .++.+-+....|.+||+|++|--|.. +...|+|
T Consensus 457 g~--------------------------~afyg--pk~d~~~~d~~G~~~~~gti~~df~l------------~~r~~~~ 496 (642)
T 1qf6_A 457 GE--------------------------GAFYG--PKIEFTLYDCLDRAWQCGTVQLDFSL------------PSRLSAS 496 (642)
T ss_dssp TC--------------------------SCTTC--CEEEEEEECTTCCEEEEEEEEEESSH------------HHHTTCC
T ss_pred CC--------------------------ccccc--CcccEEEEccCCceEEeeeEEEeccC------------CccCCCE
Confidence 00 00011 23433333345777888887643321 2334566
Q ss_pred cchhhhhccccccccccCCCCCCCccee-cc--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHH
Q 000993 1040 YDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAEL 1114 (1196)
Q Consensus 1040 YD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerl~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~L 1114 (1196)
|-+. . |. ...|++|+ ++ ++||++.+|.++ ...+...+|.+|+|++.+ +....+|.+++++|
T Consensus 497 y~~~---~---------g~-~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~-~~~~~~a~~v~~~L 562 (642)
T 1qf6_A 497 YVGE---D---------NE-RKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELTQKL 562 (642)
T ss_dssp EECT---T---------SC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-HHHHHHHHHHHHHH
T ss_pred EEec---C---------CC-CcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeC-HHHHHHHHHHHHHH
Confidence 6322 1 21 23689988 87 899999887532 122223467899999996 77889999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
|++|++|+++.. +.++++++++|+..|+||+|++|++|+++|+|+||++++++|..++++++++.|++.++..
T Consensus 563 ~~~Gi~v~~D~~-~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 563 SNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp HTTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred HhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 999999998876 6799999999999999999999999999999999999999999999999999999887753
No 263
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-34 Score=329.33 Aligned_cols=239 Identities=27% Similarity=0.407 Sum_probs=188.6
Q ss_pred CCCCCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHH-HhcCCCCeeeeeeeee
Q 000993 373 SLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL-SRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 373 ~~~~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL-~~L~HpnIV~l~~~~~ 450 (1196)
.+..+..+++|.+. +.||+|+||.||+|.++.+|+.||||+++. ...+.+|+.++ +.++||||++++++|.
T Consensus 9 ~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 9 QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhh
Confidence 34456778999998 779999999999999999999999999863 23567888888 5569999999999874
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQ 527 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~q 527 (1196)
... .....+|+|||||++ +|.+++.... .+++..++.++.|
T Consensus 82 ~~~------------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 82 NLY------------------------------------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp EEE------------------------------------TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred hhc------------------------------------CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 310 124578999999975 9999998754 6999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
|+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------------------- 171 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------------------- 171 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----------------------------------
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----------------------------------
Confidence 999999999999999999999999998 7889999999986421
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh----hcCCCC-CccccCCHHHHHHHHHcccCCCCC
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK----QKGELP-PSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~----~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+ ..++.++|||||||++|||++ ||.............. .....+ +.+...++++.+||.+||+.||.+
T Consensus 172 ---~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 172 ---G-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp ---T-CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred ---c-ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhh
Confidence 0 246789999999999999996 7765544332111100 011111 122456789999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|||+.++++|+|+.+.
T Consensus 248 Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 248 RMTITEFMNHPWIMQS 263 (299)
T ss_dssp SCCHHHHHTSHHHHTG
T ss_pred CCCHHHHhcChhhccc
Confidence 9999999999998764
No 264
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.5e-35 Score=365.60 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=199.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.+..+ +..||||+++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 46899999999999999999998754 457999987642 334455789999999999999999999988621
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|
T Consensus 463 ------------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 506 (656)
T 2j0j_A 463 ------------------------------------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506 (656)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 23589999997 69999997654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.
T Consensus 507 LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ 571 (656)
T 2j0j_A 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--------------YYKASKGKLPIKWMAPESINF-RRFTS 571 (656)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------CCGGGCCHHHHHH-CCCCH
T ss_pred HHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--------------ceeccCCCCCcceeCHHHhcC-CCCCc
Confidence 999999999999999999999999999999998653221 011233467889999999987 57899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||......+....... ...++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN--GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999985 7876655554433332 22333344567899999999999999999999999864
No 265
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.8e-34 Score=332.46 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=193.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|.+.+.||+|+||.||+|++ +|+.||||++.. .....+.+|+++++. ++||||+++++++....
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~--- 109 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN--- 109 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---
T ss_pred ccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---
Confidence 357899999999999999999998 499999999853 234567889999888 79999999999874321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+||
T Consensus 110 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 155 (342)
T 1b6c_B 110 ---------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHL 155 (342)
T ss_dssp ---------------------------------SSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHH
Confidence 112368999999975 99999975 4699999999999999999999
Q ss_pred H--------hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 536 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 536 H--------s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
| ++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++.
T Consensus 156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 224 (342)
T 1b6c_B 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLD 224 (342)
T ss_dssp HCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EEECCCSCCCCGGGCCHHHHT
T ss_pred HHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc-----------cccccccCCcCcccCCHhhhc
Confidence 9 899999999999999999999999999999765422110 011224457999999999998
Q ss_pred CCCC-----CCCcchhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCC---CCCccc--cCCH
Q 000993 608 GWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSWV--AKFS 660 (1196)
Q Consensus 608 ~~~~-----~s~ksDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~~--~~~~ 660 (1196)
+... ++.++|||||||++|||++ ||.... ........+..... ++..+. ..+.
T Consensus 225 ~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (342)
T 1b6c_B 225 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALR 304 (342)
T ss_dssp SCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHH
Confidence 7322 2368999999999999985 454321 11222222222221 222211 2234
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+.+||.+||+.||.+|||+.+++++
T Consensus 305 ~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 305 VMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHH
Confidence 68899999999999999999999976
No 266
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.9e-36 Score=344.64 Aligned_cols=269 Identities=19% Similarity=0.224 Sum_probs=189.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC------CchhHHHHHHHHHHHHhcC---------CCCeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK------SLPVNDRILREVATLSRLQ---------HQHVVR 444 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~------~~~~~~~~~~Ev~iL~~L~---------HpnIV~ 444 (1196)
.++|++.+.||+|+||+||+|++ +|+.||||+++.... .....+.+.+|+.+|+.++ |||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 47899999999999999999998 689999999986542 2233467889999999885 888888
Q ss_pred eeeeeeecCccccCCCCcCCCCccc--ccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLA--SSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELA 521 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~ 521 (1196)
+++++...+.. +..++ ...+...... ............+|+|||||+ |++.+.+.. ..+++..+
T Consensus 97 l~~~~~~~~~~---------hp~iv~~~~~~~~~~~~---~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~ 163 (336)
T 2vuw_A 97 LNSVHCVQGSY---------PPLLLKAWDHYNSTKGS---ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATA 163 (336)
T ss_dssp EEEEEEEESSC---------CHHHHHHHHHHHHHTCC---SSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHH
T ss_pred hcceeEecCCC---------cHHHHHHHHHHhhhccc---cccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHH
Confidence 88876432100 00000 0000000000 000000112567899999996 455555533 66899999
Q ss_pred HHHHHHHHHHHHHHH-hCCCcccCCCcCcEEecCCC--------------------CeEEeccCcchhccccccccCCCC
Q 000993 522 WHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARN--------------------DIKIGDFGLAKFLKLEQLDQDAAF 580 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLH-s~gIiHrDLKp~NILld~~~--------------------~vKL~DFGlA~~~~~~~~~~~~~~ 580 (1196)
+.++.||+.||+||| ++||+||||||+|||++.++ .+||+|||+|+....
T Consensus 164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------- 234 (336)
T 2vuw_A 164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------- 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------
T ss_pred HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------
Confidence 999999999999999 99999999999999999887 899999999986431
Q ss_pred CCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH-HHHhhc---CCchhHHHHHHHHHhhh----cCC-C
Q 000993 581 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV-FFELWH---PFSTAMERQIVLSDLKQ----KGE-L 651 (1196)
Q Consensus 581 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi-LyELlt---Pf~~~~~~~~~~~~l~~----~~~-~ 651 (1196)
...+||+.|||||++.+.. +.++|||||+++ .+++++ ||............+.. ... .
T Consensus 235 -----------~~~~gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
T 2vuw_A 235 -----------GIVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301 (336)
T ss_dssp -----------TEEECCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC
T ss_pred -----------CcEEEeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc
Confidence 2348999999999999743 889999998877 666765 55432211111112111 111 1
Q ss_pred CCccccCCHHHHHHHHHcccCCCCCCCCHHHHH-hccCCC
Q 000993 652 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-QDALPP 690 (1196)
Q Consensus 652 p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL-~~~~~~ 690 (1196)
++.+...++++.+||++||+.| |+.++| +||||+
T Consensus 302 ~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 302 TPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp SHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred hhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 2234456678999999999976 999999 999984
No 267
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-36 Score=339.56 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=175.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
++|.+.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~----- 70 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDN----- 70 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-----
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCC-----
Confidence 57899999999999999999874 899999998532 24567788888887 79999999999885431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH- 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH- 536 (1196)
.....+|+|||||++ +|.+++.. ..+++..++.++.|++.||+|||
T Consensus 71 -------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~l~~lH~ 118 (303)
T 3gxj_A 71 -------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp -------------------------------SSSEEEEEEEECCTTCCHHHHHHH-CCBCC-CHHHHC-CHHHHHC-CCC
T ss_pred -------------------------------CccceeEEEEeccCCCCHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHH
Confidence 112478999999975 99999965 46888899999999999999999
Q ss_pred -------hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 537 -------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 537 -------s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++.+.
T Consensus 119 ~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE-----------ESCC-----CCGGGCCHHHHTTC
T ss_pred HHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc-----------cccccCCCCcCccccCHhhhcCc
Confidence 999999999999999999999999999999765432211 01112345799999999999873
Q ss_pred CC-----CCCcchhHHHHHHHHHhhc-------------CCchhHHH----HHHHHHhhhcCC---CCCccc--cCCHHH
Q 000993 610 PK-----IDEKADMYSLGIVFFELWH-------------PFSTAMER----QIVLSDLKQKGE---LPPSWV--AKFSEQ 662 (1196)
Q Consensus 610 ~~-----~s~ksDVwSlGviLyELlt-------------Pf~~~~~~----~~~~~~l~~~~~---~p~~~~--~~~~~l 662 (1196)
.. ++.++|||||||++|||++ ||...... ......+..... .+..+. ..++.+
T Consensus 188 ~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (303)
T 3gxj_A 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267 (303)
T ss_dssp SCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHH
T ss_pred ccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHH
Confidence 22 3368999999999999985 33322110 111111111111 222111 122468
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+||++||+.||.+|||+.++++.
T Consensus 268 ~~li~~cl~~dP~~Rps~~~i~~~ 291 (303)
T 3gxj_A 268 AKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhccCcccCCCHHHHHHH
Confidence 999999999999999999999864
No 268
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-35 Score=368.28 Aligned_cols=263 Identities=25% Similarity=0.306 Sum_probs=198.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|.+..+|+.||||+++.. ........+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~---- 85 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ---- 85 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC----
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc----
Confidence 3458899999999999999999999999999999988643 34455678999999999999999999998762210
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~ 533 (1196)
........|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 86 ------------------------------~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~ 135 (676)
T 3qa8_A 86 ------------------------------KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135 (676)
T ss_dssp ------------------------------CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHH
T ss_pred ------------------------------cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHH
Confidence 0012345689999995 59999998654 5999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ .
T Consensus 136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~APE~l~~-~ 198 (676)
T 3qa8_A 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----------------LCTEFVGTLQYLAPELLEQ-K 198 (676)
T ss_dssp HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----------------CCCCCCSCCTTCSSCSSCC-S
T ss_pred HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc----------------ccccccCCcccCChHHhcc-C
Confidence 999999999999999999997765 9999999998643211 1234579999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH---------H-----hhhcCCC------CC-ccccCCHHHHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS---------D-----LKQKGEL------PP-SWVAKFSEQESLL 666 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~---------~-----l~~~~~~------p~-~~~~~~~~l~~LI 666 (1196)
.++.++|||||||++|+|++ ||........... . ....... |. .....++.+.+||
T Consensus 199 ~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI 278 (676)
T 3qa8_A 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL 278 (676)
T ss_dssp CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHH
Confidence 78999999999999999997 7754322211000 0 0000000 11 1112346789999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
++||..||.+|||+.++++|+||...
T Consensus 279 ~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 279 QCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp HHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred HHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 99999999999999999999998753
No 269
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-35 Score=351.19 Aligned_cols=275 Identities=15% Similarity=0.109 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQH-QHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~~~~~~ 458 (1196)
.+|...+.||+|+||+||+|++..+|+.||||+++.... .....+.+.+|+.+++.++| +|...+...+--- . .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~--~--~ 153 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI--F--P 153 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBC--C--C
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccc--c--c
Confidence 468889999999999999999999999999999874332 22235678999999999987 4332222110000 0 0
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-------cCCCCHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-------YDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-------~~~l~e~~~~~i~~qIa~g 531 (1196)
.+.....+.. ................++++|+++.++|.+++.. ...+++..++.++.||+.|
T Consensus 154 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a 223 (413)
T 3dzo_A 154 FDLVKDPQKK----------KMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223 (413)
T ss_dssp CEEEECCC-------------------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCC----------ccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence 0000000000 0000000000111345789999999999988842 2347788899999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---- 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---- 607 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++.
T Consensus 224 L~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------------------~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 224 LASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------------------AVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------------------ECCCCC-TTTCCHHHHHHHTS
T ss_pred HHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------------------cccCCC-CceeCchhhhcccc
Confidence 99999999999999999999999999999999998764321 234577 9999999983
Q ss_pred -----CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 608 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 608 -----~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
....++.++|||||||++|||++ ||............ ...+...++++.+||.+||+.||.+|||
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dP~~Rpt 357 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLL 357 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------GSSCCCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------HhhcccCCHHHHHHHHHHccCChhhCcC
Confidence 22457889999999999999996 88655432221111 1122345678999999999999999999
Q ss_pred HHHHHhccCCCCchHH
Q 000993 680 ATELLQDALPPQMEYE 695 (1196)
Q Consensus 680 a~eiL~~~~~~~~~~~ 695 (1196)
+.++++|+||.++...
T Consensus 358 ~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 358 PLQAMETPEYEQLRTE 373 (413)
T ss_dssp HHHHTTSHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHH
Confidence 9999999998876433
No 270
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=100.00 E-value=3.9e-34 Score=341.49 Aligned_cols=350 Identities=10% Similarity=0.023 Sum_probs=255.4
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHH-HHcCCccccccce----ee--cCCCcccccceEEEeec--CCceEeecCC
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMF-RQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--GGDLLELSHE 808 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f-~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--~G~~laLRPD 808 (1196)
.+...|+.+|+|.++.+++.|++.+++.+ +++||++|.||+| ++ .++.+.+.++||.|.|. +|+.++|||+
T Consensus 50 ~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt 129 (460)
T 3uh0_A 50 DPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPM 129 (460)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEECC------CEEECSC
T ss_pred ccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEEecCCCCCceEEEccc
Confidence 34589999999999999999999999999 9999999999999 22 24466778999999987 4899999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccchHH---HHHHHHHHH-HH
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV-TR 875 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L-~~ 875 (1196)
.|++++++++.. +..|+|+||+|+|||+|.++ + |.+||+|.|+|+||.++ .+|+| +|.++.+++ +.
T Consensus 130 ~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~e-~~~~e~~~~i~~~~~~~~~~ 208 (460)
T 3uh0_A 130 NCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPS-QVKSEIFNSLKLIDIVYNKI 208 (460)
T ss_dssp SHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECGG-GHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999998763 24599999999999999874 3 55679999999998764 56665 999999999 99
Q ss_pred cCCC--------CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHH
Q 000993 876 FFHA--------ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 947 (1196)
Q Consensus 876 lgi~--------~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~ 947 (1196)
||+. + +.+.++++. -+.+|-.+.|.++.
T Consensus 209 lGl~~~~~~~~~~-~~~~l~t~p-----e~~~G~~~~w~~ae-------------------------------------- 244 (460)
T 3uh0_A 209 FPFVKGGSGAESN-YFINFSTRP-----DHFIGDLKVWNHAE-------------------------------------- 244 (460)
T ss_dssp SCCC-----CCSS-CEEEEECCC-----SSCCSCHHHHHHHH--------------------------------------
T ss_pred cCCCCcccccccc-eEEEEccCC-----cccCCCHHHHHHHH--------------------------------------
Confidence 9997 5 889888742 01123111110000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEe-cCCCCcc
Q 000993 948 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFS-VKEKYPA 1026 (1196)
Q Consensus 948 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~-~~~~~~~ 1026 (1196)
..|.. +|+..|. .+.++++ .-.|| |.-.++.. ...+..
T Consensus 245 -~~L~~---------------------------------~l~~~g~--~~~~~~g---~gafy-gpkid~~~~d~~gr~- 283 (460)
T 3uh0_A 245 -QVLKE---------------------------------ILEESGK--PWKLNPG---DGAFY-GPKLDIMVTDHLRKT- 283 (460)
T ss_dssp -HHHHH---------------------------------HHHHHTC--CEEEETT---CSCSS-CCEEEEEEECTTSCE-
T ss_pred -HHHHH---------------------------------HHHHhCC--CeeECCC---ccccc-cceEEEEEEccCCCe-
Confidence 00000 1112232 3555655 33366 43334322 111210
Q ss_pred cccccccc----ccccccchhhhhccccccccccCCCCCCCcc----eecccHHHHHhhccC--CCCCCCCCCCceEEEE
Q 000993 1027 TLVEGTLL----AVGGRYDYLLHRMWDREYVGYASRTNPPSGV----GASLALETIIQHYPV--DFKPVRNEAGTSVLVC 1096 (1196)
Q Consensus 1027 ~~~~~~~I----~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv----Gfaiglerl~~~L~~--~~~~~~~~~~~~vlv~ 1096 (1196)
-+.++| ..+.|||-. | ....| +...|++ +|+ ++||++.+|.+ +...+...+|.+|+|+
T Consensus 284 --~q~~Tiqld~~~~~rf~l~---y-----~~~~g-~~~~P~~ih~~~~G-g~eRli~~Lie~~~g~~P~~laP~qv~Vi 351 (460)
T 3uh0_A 284 --HQVATIQLDFQLPERFDLK---F-----KDQDN-SYKRPIMIHRATFG-SIERFMALLIDSNEGRWPFWLNPYQAVII 351 (460)
T ss_dssp --EEEEEEEEESHHHHHTTCC---E-----ECTTS-CEECCEEEEEEEEE-EHHHHHHHHHHHHTTCCCGGGCSCCEEEE
T ss_pred --eeecccccccccccccceE---E-----ECCCC-CccCcEEEecCcch-HHHHHHHHHHHHcCCCCCCCCCCceEEEE
Confidence 011122 234566533 1 11222 2346887 477 89999998863 2222233578899999
Q ss_pred EcCCCc---hHHHHHHHHHHHHHc--------------CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeE
Q 000993 1097 SRGGGG---LLVERMELVAELWEE--------------NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1159 (1196)
Q Consensus 1097 ~~~~~~---~~~~a~~~a~~Lr~~--------------Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v 1159 (1196)
+.+ +. ...+|.+++++||+. |++|+++.. +.++++++++|++.|+|++|+||++|+++|+|
T Consensus 352 pi~-~~~~~~~~~a~~l~~~Lr~~~~~~~~~~~~~~~~Gi~v~~D~~-~~~lg~k~r~Ad~~g~p~~ivvG~~E~~~g~V 429 (460)
T 3uh0_A 352 PVN-TKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIR-NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKY 429 (460)
T ss_dssp ESS-TTCHHHHHHHHHHHHHHHCCCCTTSSCCCCTTCCCCCEEECCC-SSCHHHHHHHHHHHTCSEEEEECHHHHHHTCE
T ss_pred Eec-CCcHHHHHHHHHHHHHHHcCcccccccccccCCCCEEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhCCeE
Confidence 996 55 788999999999999 999998877 67999999999999999999999999999999
Q ss_pred EEEEcCCCc-ccccchHHHHHHHHHHHHh
Q 000993 1160 KVRHLDVKK-EKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1160 ~vk~l~~g~-q~~v~~~el~~~l~~~l~~ 1187 (1196)
+||++++++ |..++++++++.|++++++
T Consensus 430 tvr~r~~~e~q~~v~~~el~~~l~~~~~~ 458 (460)
T 3uh0_A 430 NIRERDNRKSFEKLTMSQIWEKFIELEKN 458 (460)
T ss_dssp EEEEGGGTTSCEEECHHHHHHHHHHHHHT
T ss_pred EEEECCCCceeEEeeHHHHHHHHHHHHHh
Confidence 999999999 9999999999999998874
No 271
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.3e-34 Score=361.01 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=192.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||+|+||.||+|.+.. +|+.||||++... ........+.+|+.+++.++|||||+++++|.+.+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-- 153 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR-- 153 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--
Confidence 344899999999999999999999976 7999999988643 334455678999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|||||||+| +|.+++.. .+++.+++.++.||+.||+||
T Consensus 154 ---------------------------------~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~l 198 (681)
T 2pzi_A 154 ---------------------------------HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYL 198 (681)
T ss_dssp ---------------------------------TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHH
Confidence 113457999999975 88887654 799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.+ .+||+|||+++.... ....+||+.|+|||++.+. ++.+
T Consensus 199 H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~--~~~~ 256 (681)
T 2pzi_A 199 HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-------------------FGYLYGTPGFQAPEIVRTG--PTVA 256 (681)
T ss_dssp HHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-------------------CSCCCCCTTTSCTTHHHHC--SCHH
T ss_pred HHCCCeecccChHHeEEeCC-cEEEEecccchhccc-------------------CCccCCCccccCHHHHcCC--CCCc
Confidence 99999999999999999875 999999999975421 1345799999999999873 5899
Q ss_pred chhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 616 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 616 sDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+|||||||+||+|++++.+.... . ....+ ......++.+.+||.+||+.||.+||+..+.+.|+|+
T Consensus 257 sDi~slG~~l~~l~~g~~~~~~~------~--~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 257 TDIYTVGRTLAALTLDLPTRNGR------Y--VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHHHHHHHSCCCEETTE------E--CSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred eehhhhHHHHHHHHhCCCCCccc------c--cccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 99999999999999854432210 0 01111 1122345688999999999999999998888887654
No 272
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=100.00 E-value=6.1e-33 Score=334.83 Aligned_cols=331 Identities=10% Similarity=0.069 Sum_probs=264.6
Q ss_pred ccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC---CcccccceEEEeecC----Cc
Q 000993 733 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHG----GD 801 (1196)
Q Consensus 733 ~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~----G~ 801 (1196)
+.+......+|+.|++|.++.+++.|++.+++.|++ ||++|.||+| ++.+. .+.+.++||+|.|.+ |+
T Consensus 52 glid~~~~~~G~~~~~P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~~d~g~~~~~~ 130 (501)
T 1nj1_A 52 EIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQR 130 (501)
T ss_dssp TCEECCCSSTTCCEECHHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEE
T ss_pred CCccccCCCCceEEECccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccCCcceEEEecCCCcccCC
Confidence 333333456999999999999999999999999999 9999999999 34332 335689999999976 78
Q ss_pred eEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCC-CCC---Cccee-EeEEEEeCCCCccchHHH---HHHH
Q 000993 802 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HSP---PNRYL-QGDFDIIGGASALTEAEV---LKVT 869 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~~---~~ef~-Q~GvEiiG~~~~~aDaEv---I~la 869 (1196)
.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +.+ .+||+ |++++++|.....+|+|+ |.++
T Consensus 131 ~l~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~~~~e~a~~e~~~~l~~~ 210 (501)
T 1nj1_A 131 KLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIY 210 (501)
T ss_dssp EEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeEEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEECCHHHHHHHHHHHHHHH
Confidence 9999999999999999874 2569999999999999887 544 45699 999999998888888884 9999
Q ss_pred HHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHH
Q 000993 870 MDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 949 (1196)
Q Consensus 870 ~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~ 949 (1196)
.++|+.||+. +.+.++.. .++ +
T Consensus 211 ~~i~~~Lgl~--~~~~~~~~--------------------------~e~-----------------------~------- 232 (501)
T 1nj1_A 211 KEFFNSLGIP--YLITRRPP--------------------------WDK-----------------------F------- 232 (501)
T ss_dssp HHHHHHHTCC--CEEEECCT--------------------------TTS-----------------------C-------
T ss_pred HHHHHHCCCe--EEEEeCCc--------------------------hhh-----------------------c-------
Confidence 9999999995 88877531 000 0
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc
Q 000993 950 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1029 (1196)
Q Consensus 950 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~ 1029 (1196)
.+. ...+.++..++.|..|+.|.+|+.- .
T Consensus 233 ---------~~a--------------------------------~~~~die~~l~~g~~~ei~t~~~lg---~------- 261 (501)
T 1nj1_A 233 ---------PGS--------------------------------EYTVAFDTLMPDGKTLQIGTVHNLG---Q------- 261 (501)
T ss_dssp ---------TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEEE---T-------
T ss_pred ---------CCc--------------------------------ccceEEEEEcCCCCEEEEEEEEecc---c-------
Confidence 000 0124566666668888999998651 1
Q ss_pred cccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC------CCCCCCCCCceEEEEEc-C-CC
Q 000993 1030 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD------FKPVRNEAGTSVLVCSR-G-GG 1101 (1196)
Q Consensus 1030 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~------~~~~~~~~~~~vlv~~~-~-~~ 1101 (1196)
..+.+.|+||++- . |. ...++++||+++ +|++.+|.+. ...+....|.+|+|++. + ++
T Consensus 262 -~~a~~~~~ry~~~--~-g~---------~~~~h~~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~qV~Iipi~~~~~ 327 (501)
T 1nj1_A 262 -TFARTFEIKFETP--E-GD---------HEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKA 327 (501)
T ss_dssp -HHHHHHTCEEECT--T-SC---------EEECEEEEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCSEEEEECCSSSS
T ss_pred -cchhhcCeEEECC--C-CC---------EEeeeeccccHH-HHHHHHHHHHcCcccCccCCccccCceEEEEEeccCCc
Confidence 1268899999873 1 22 123567899999 9999887421 11222346789999998 4 32
Q ss_pred --chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHH
Q 000993 1102 --GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVR 1179 (1196)
Q Consensus 1102 --~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~ 1179 (1196)
....+|.+++++||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++
T Consensus 328 ~~~~~~~a~~l~~~Lr~~Gi~v~~D~~-~~s~g~k~~~a~~~G~p~~iiiG~~e~~~~~V~vr~r~t~eq~~v~~~el~~ 406 (501)
T 1nj1_A 328 AEEVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEE 406 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEEEESSSCCEEEEETTTHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCEEEEEECCCCceEEEeHHHHHH
Confidence 5788999999999999999998876 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 000993 1180 FLLDAIASQ 1188 (1196)
Q Consensus 1180 ~l~~~l~~~ 1188 (1196)
.|++.++..
T Consensus 407 ~l~~~l~~~ 415 (501)
T 1nj1_A 407 TLRELMKDI 415 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998776643
No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.4e-33 Score=314.69 Aligned_cols=222 Identities=14% Similarity=0.074 Sum_probs=177.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ......+.+|+.+++.++||||+++++++.+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------ 102 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT------ 102 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE------
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE------
Confidence 346799999999999999999999999999999999765433 3445789999999999999999999998733
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ....++..++.||+.||+|||
T Consensus 103 ----------------------------------~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 103 ----------------------------------RAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAH 146 (286)
T ss_dssp ----------------------------------TTEEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCcEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHH
Confidence 346899999997 5999998543 466678999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+++| |++| ++.++
T Consensus 147 ~~givH~Dikp~NIll~~~g~~kl~~~~-----------------------------------~~~~--------~~~~~ 183 (286)
T 3uqc_A 147 RAGVALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------TMPD--------ANPQD 183 (286)
T ss_dssp HTTCCCCCCSGGGEEEETTSCEEECSCC-----------------------------------CCTT--------CCHHH
T ss_pred HCCCccCCCCcccEEEcCCCCEEEEecc-----------------------------------ccCC--------CCchh
Confidence 9999999999999999999999998443 3332 68899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCCCC---ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELPP---SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~p~---~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||++|||++ ||.............. .....++ .....++++.+||.+||+.||.+| |+.++++.
T Consensus 184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 99999999999997 8865433211000000 0111111 123567789999999999999999 99999874
No 274
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.97 E-value=1.5e-30 Score=323.04 Aligned_cols=402 Identities=12% Similarity=0.037 Sum_probs=231.4
Q ss_pred hhccccccccc----CCCCcccccchhhhHhhHHHHHHHHHHHH-HcCCccccccce----ee--cCCCcccc-------
Q 000993 728 MKHHAGTLRLN----RDNTSSIQYSDLDTELRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFK------- 789 (1196)
Q Consensus 728 ~~~~~~~l~~~----~~~~G~~D~~p~ea~~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~------- 789 (1196)
+....+++.-. ....|+.||+|.++++++.|++.|++.|. ..||.+|.||++ ++ +++.+.+.
T Consensus 73 l~~r~gf~~~~~eiy~g~~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~~~ 152 (693)
T 2zt5_A 73 TLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDV 152 (693)
T ss_dssp HHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEEBS
T ss_pred HHHhCCCcccchhhcCCCCCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccceeec
Confidence 33344555433 23489999999999999999999999998 569999999999 22 23333332
Q ss_pred --cceEEEeec---------------------------------------------------------------------
Q 000993 790 --RNTVKLLTH--------------------------------------------------------------------- 798 (1196)
Q Consensus 790 --~~my~f~D~--------------------------------------------------------------------- 798 (1196)
++||+| |+
T Consensus 153 ~~~e~yr~-D~l~e~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlmf~t~ 231 (693)
T 2zt5_A 153 KNGECFRA-DHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTF 231 (693)
T ss_dssp SSCCEEEH-HHHHHHHHHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCEEE
T ss_pred cCCceeec-cHhHHHHHHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhheeeecc
Confidence 456665 33
Q ss_pred ----CCceEeecCCCcHHH----HHHHHhC-CCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCcc-----
Q 000993 799 ----GGDLLELSHELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASAL----- 860 (1196)
Q Consensus 799 ----~G~~laLRPD~T~~i----aR~~a~~-~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~----- 860 (1196)
+|+.+.||||.|.++ +|.+..+ +..|+|+||+|++||+| +|+.| .|||+|+++|+||.++..
T Consensus 232 igp~~~~~~~LRPEtaqg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y 311 (693)
T 2zt5_A 232 IGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKF 311 (693)
T ss_dssp CSSSSSSEEEECSCSHHHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTG
T ss_pred ccCCCCcceeeccccchHHHHHHHHHHHHhCcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhH
Confidence 468899999999998 8988774 67799999999999998 77754 457999999999987765
Q ss_pred ---chHH------------------------------------HHHHHHHHHHHcCCCCceEEEeCcH--HHHHHHHH--
Q 000993 861 ---TEAE------------------------------------VLKVTMDIVTRFFHAESCDIHLNHG--DLLEAIWS-- 897 (1196)
Q Consensus 861 ---aDaE------------------------------------vI~la~~~L~~lgi~~~~~i~Lg~~--~i~~~~l~-- 897 (1196)
+|+| +|.++.++|..+|+.. ..+.+... .-......
T Consensus 312 ~~v~da~~~~~~~~~~~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~-~~~~~~~~~~~e~a~ya~~~ 390 (693)
T 2zt5_A 312 QNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISP-DKLRFRQHMENEMAHYACDC 390 (693)
T ss_dssp GGTTTCEEEEECHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCG-GGEEEEECCGGGSCTTCSSE
T ss_pred HHHHHHHHhhhhhhhhccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCc-cEEEEeccCchhhccchhhh
Confidence 3433 8999999999999974 33333211 00000000
Q ss_pred -------HcC------CCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChh
Q 000993 898 -------WAG------IKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAAD 963 (1196)
Q Consensus 898 -------~lg------l~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~ 963 (1196)
..| ..+...-.|...... ...+. ... +.......+... +..........+ ..++.
T Consensus 391 ~d~e~~~~~g~~e~~~~a~r~~~dL~~~~~~s~~~l~--~~~-~~~~p~~~~~~~----~~~~~~~~g~~i----~~~Ap 459 (693)
T 2zt5_A 391 WDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLV--AEK-PLKEPKTVNVVQ----FEPSKGAIGKAY----KKDAK 459 (693)
T ss_dssp EEEEEEETTEEEEEEEEECCCSHHHHHHHHHHTCCCC--EEE-C------------------------------------
T ss_pred hhehhhccCChHHHHHHHHHHHHHHHHHHHHhccchh--hhc-ccCcccceeeee----ecCChHHHHHHH----Hhccc
Confidence 000 000000011111111 11010 000 000000000000 000000000000 00000
Q ss_pred hHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 964 QALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 964 ~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
.+.+.|. ....+.++++ .|...|. -.+.+| |++|++..... +--||+
T Consensus 460 ~i~d~L~------~~~~~~~~~l~~~L~~~g~-i~i~vd-----------Gt~Fei~~~~~-------------~~~~y~ 508 (693)
T 2zt5_A 460 LVMEYLA------ICDECYITEMEMLLNEKGE-FTIETE-----------GKTFQLTKDMI-------------NVKRFQ 508 (693)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhh------hhhHHHHHHHHHHHHhcCC-EEEEEC-----------CEEEEeccccc-------------ceeeEE
Confidence 1111111 1122333333 4444551 123334 68888853210 011343
Q ss_pred hhhhhccccccccccCCCCCCCcc-eecccHHHHHhhccCC-------------CCCCCCCCCceEEEEEcCCC-chHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPVD-------------FKPVRNEAGTSVLVCSRGGG-GLLVE 1106 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~~-------------~~~~~~~~~~~vlv~~~~~~-~~~~~ 1106 (1196)
.. ..|+ +.+|+| |+|+|++||+.+|.+. ...+...++.+|+|++.+.+ ....+
T Consensus 509 ~~--~~Gg----------ry~P~Vi~~s~GigRli~aLie~~~~~~~~~~~r~g~~~P~~lAP~qV~Vipl~~~~~~~~~ 576 (693)
T 2zt5_A 509 KT--LYVE----------EVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 576 (693)
T ss_dssp -----CCE----------EECCEEEEEEEEHHHHHHHHHHHHEEECSSTTCCEEECCCTTTSSCSEEEEESCCSTTTHHH
T ss_pred ec--cCCc----------EecCcceeCeehHHHHHHHHHHHhccccccccccccccCCCCCCCCeEEEEEecCcHHHHHH
Confidence 21 1111 113888 9999999999887421 11122235789999999632 37899
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcc--cCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA--QKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~--~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
|.++++.||+.|++|++++. +.++++++++|++.|+||+|+||++|+ ++|+|+||++++++|..++++++++.|++.
T Consensus 577 A~~l~~~Lr~~Gi~v~~D~~-~~sigkk~k~Ad~~G~p~~IiIG~~El~~~~g~Vtvr~r~t~eq~~v~l~el~~~l~~~ 655 (693)
T 2zt5_A 577 VKELSEALTRHGVSHKVDDS-SGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDL 655 (693)
T ss_dssp HHHHHHHHHHTTCCEEECCC-CSCHHHHHHHHHHTTCCEEEEECHHHHTSSSCEEEEEETTTCCEEEEETTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhccCCEEEEEECCCCceEEEeHHHHHHHHHHH
Confidence 99999999999999998775 579999999999999999999999999 999999999999999999999999999877
Q ss_pred HH
Q 000993 1185 IA 1186 (1196)
Q Consensus 1185 l~ 1186 (1196)
++
T Consensus 656 l~ 657 (693)
T 2zt5_A 656 AN 657 (693)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 275
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.96 E-value=6.1e-29 Score=300.28 Aligned_cols=344 Identities=13% Similarity=0.045 Sum_probs=237.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHH--HcCCccccccce----ee--cCCCcccccceEE-----------------
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM----YL--LGDCPQFKRNTVK----------------- 794 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~--~~Gy~~I~tP~~----~~--~~~~~~~~~~my~----------------- 794 (1196)
.+.|+.||+|..+.+++.|++.+++.|. ++||.+|.||++ ++ +++.+.+.+.||+
T Consensus 27 ~~~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~~~~~~~~~r~d~l~~~~ 106 (505)
T 1ati_A 27 GLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQ 106 (505)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC----------------
T ss_pred CCCCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCccceeccccccccchhhhhhhh
Confidence 4589999999999999999999999999 999999999999 11 2223333344443
Q ss_pred --------------------E------e-----------------ecC-------------------------CceEeec
Q 000993 795 --------------------L------L-----------------THG-------------------------GDLLELS 806 (1196)
Q Consensus 795 --------------------f------~-----------------D~~-------------------------G~~laLR 806 (1196)
| . +.+ ++.+.||
T Consensus 107 ~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fnlmf~t~~gpt~ee~~~~~LR 186 (505)
T 1ati_A 107 PEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLR 186 (505)
T ss_dssp ----------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred hhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhhhhhhcccCCccccccceeec
Confidence 3 2 112 4678999
Q ss_pred CCCcHHH----HHHHHhC-CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccc--hHHHHHHHHHHHHH
Q 000993 807 HELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTR 875 (1196)
Q Consensus 807 PD~T~~i----aR~~a~~-~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~a--DaEvI~la~~~L~~ 875 (1196)
|+.|.++ +|.+.++ +..|+|+||+|++||+| +|+. |.|||+|.++|+||.++... +++++.++.++++.
T Consensus 187 PE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~e~~~~~~~~~i~~~~~i~~~ 266 (505)
T 1ati_A 187 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQE 266 (505)
T ss_dssp SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8888887 78899999999999998 7774 45579999999999888765 78999999999999
Q ss_pred cCCCCceEEEeCcHHHHHHHHHHcC-CCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHH
Q 000993 876 FFHAESCDIHLNHGDLLEAIWSWAG-IKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 954 (1196)
Q Consensus 876 lgi~~~~~i~Lg~~~i~~~~l~~lg-l~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l 954 (1196)
||+.. +.+.+.... . +.+. ..... ....... ..+|. + + .++
T Consensus 267 LGl~~-~~v~~~~~~--~---~~~~~~~~~~--------~d~E~~~------p~~~~----e-~--~g~----------- 308 (505)
T 1ati_A 267 MGLSR-ENLVPYQQP--P---ESSAHYAKAT--------VDILYRF------PHGSL----E-L--EGI----------- 308 (505)
T ss_dssp TTCCG-GGEEEEECC--T---TTSCTTCSEE--------EEEEEEE------TTEEE----E-E--EEE-----------
T ss_pred cCCCe-EEEEECCCC--h---HhhhcccHHH--------HhHHhhc------CCCCc----c-c--hhh-----------
Confidence 99974 455443310 0 0000 00000 0000000 00000 0 0 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc
Q 000993 955 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 955 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
..+++. .+..- .. ..+.. .++.+. ..+-|+++.|+++..
T Consensus 309 --~~~~d~--~L~~~---~~---------------~~~~~-~~~~~~----~~n~~~~~~~~y~d~-------------- 347 (505)
T 1ati_A 309 --AQRTDF--DLGSH---TK---------------DQEAL-GITARV----LRNEHSTQRLAYRDP-------------- 347 (505)
T ss_dssp --EECTTH--HHHHH---CS---------------STTTT-TCCSCC----CCCSCCCSCCCEECS--------------
T ss_pred --hcccce--ecchh---hc---------------ccccc-ceeeee----cccccceeEEEEEcC--------------
Confidence 000000 00000 00 00000 011111 123378888777532
Q ss_pred ccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---------C------CCCCCCCCceEEEEEcC
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---------F------KPVRNEAGTSVLVCSRG 1099 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---------~------~~~~~~~~~~vlv~~~~ 1099 (1196)
.+|+||- .+++|||+|+||++.+|.+. . ..+...++.+|+|++.+
T Consensus 348 ~g~~~y~--------------------p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~v~Vip~~ 407 (505)
T 1ati_A 348 ETGKWFV--------------------PYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLV 407 (505)
T ss_dssp SSCCEEC--------------------CEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCSEEEEESC
T ss_pred CCCeeec--------------------ceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCceEEEEEcC
Confidence 1456762 13999999999998776521 1 11112367899999986
Q ss_pred CC---chHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCccc---------CCeEEEEEcCC
Q 000993 1100 GG---GLLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ---------KGLVKVRHLDV 1166 (1196)
Q Consensus 1100 ~~---~~~~~a~~~a~~Lr~~G-i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~---------~g~v~vk~l~~ 1166 (1196)
+ +...+|.+++++||+.| ++|+++.. +++++++++|++.|+|++|+||++|++ +|+|+||++++
T Consensus 408 -~~~~~~~~~a~~l~~~Lr~~G~i~v~~D~~--~sig~k~~~ad~~g~p~~iivG~~el~~~~~~~~~~~g~V~vr~r~t 484 (505)
T 1ati_A 408 -KNRPEITEYAKRLKARLLALGLGRVLYEDT--GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDT 484 (505)
T ss_dssp -SSCHHHHHHHHHHHHHHHTTCSSCEEECCC--SCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTTEEEEEETTT
T ss_pred -CccHHHHHHHHHHHHHHhccCCEEEEECCC--CCHHHHHHHHHHCCCCEEEEEChHHhhhccccccccCCEEEEEECCC
Confidence 4 57889999999999999 99997654 699999999999999999999999999 99999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l 1185 (1196)
++|..++++++++.|++.+
T Consensus 485 ~~q~~v~~~el~~~l~~~l 503 (505)
T 1ati_A 485 MEQIRLHVDELEGFLRERL 503 (505)
T ss_dssp CCEEEEEHHHHHHHHHHHH
T ss_pred CceEEEEHHHHHHHHHHHh
Confidence 9999999999999998765
No 276
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.95 E-value=5.9e-27 Score=281.29 Aligned_cols=325 Identities=9% Similarity=-0.021 Sum_probs=236.3
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecCCc----eEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 808 (1196)
..+|+.+++|.++.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||.|.|.+++ .++|||+
T Consensus 49 ~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy~~~d~g~~~l~e~l~LrPt 128 (519)
T 4hvc_A 49 DISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRPT 128 (519)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCEEEEEETTEEEEEEEEECSS
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccccccceEEeccCCcccccceeeCCC
Confidence 5789999999999999999999999999999999999999 333 3456678999999998764 6999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHH---HHHHHHHHHHc-
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRF- 876 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L~~l- 876 (1196)
.|++++++++.. +.+|+|++|+|+|||+| +++. |.+||+|.++++|+.....+++|+ +.+..++++.|
T Consensus 129 se~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~~~e~a~~E~~~~l~~~~~i~~~ll 208 (519)
T 4hvc_A 129 SETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEELL 208 (519)
T ss_dssp SHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEecCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988773 34699999999999998 6554 445699999999888888888875 56678888886
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+. +.+.+.+. .++
T Consensus 209 ~lp--~~~~~~t~--------------------------~e~-------------------------------------- 222 (519)
T 4hvc_A 209 AIP--VVKGRKTE--------------------------KEK-------------------------------------- 222 (519)
T ss_dssp CCC--CEEEECCT--------------------------TTS--------------------------------------
T ss_pred CCc--ceeeecCC--------------------------ccc--------------------------------------
Confidence 664 54433210 010
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEc---CCCCCCCCCccceEEEEEecCCCCccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYID---ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTL 1033 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~D---l~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~ 1033 (1196)
+.|.. ..+.++ +++.|.. -.|++|..
T Consensus 223 -~~Ga~--------------------------------~t~~iEa~~p~~gr~~--q~gT~~~L---------------- 251 (519)
T 4hvc_A 223 -FAGGD--------------------------------YTTTIEAFISASGRAI--QGGTSHHL---------------- 251 (519)
T ss_dssp -CTTSS--------------------------------EEEEEEEEETTTTEEE--EEEEEEEE----------------
T ss_pred -cCCch--------------------------------hheeeeeeeccCCCEE--eecccccc----------------
Confidence 00100 001111 1111111 13444332
Q ss_pred cccccccchhhhhccccccccc--cCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC-----
Q 000993 1034 LAVGGRYDYLLHRMWDREYVGY--ASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG----- 1100 (1196)
Q Consensus 1034 I~~GGRYD~L~~~fg~~~~~~~--~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~----- 1100 (1196)
| +++.++|+-.- ... -|....+--.+|+++ +|++.+|.+ +...+...+|.+|+|++++.
T Consensus 252 ---g---~~~s~~~~i~y-~d~~~~g~~~~vh~~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~ 323 (519)
T 4hvc_A 252 ---G---QNFSKMFEIVF-EDPKIPGEKQFAYQNSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALS 323 (519)
T ss_dssp ---E---THHHHHHTCEE-ECTTSTTCEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCC---CC
T ss_pred ---c---chhhhhcCcEE-eccccCCCEEEEEEccccHH-HHHHHHHHHHhCccccccccccCCCeEEEEEEecCccccc
Confidence 1 23333343110 000 111121222367777 999888752 22233346788999999852
Q ss_pred ----CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHH
Q 000993 1101 ----GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRES 1176 (1196)
Q Consensus 1101 ----~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~e 1176 (1196)
+....+|.++++.||+.|++|++++...+++++++++|+..|+|++|+||++|+++|+|+||++++|++..+++++
T Consensus 324 ~~~~e~~~~~a~~l~~~L~~~Girv~~Ddr~~~s~G~K~~~ael~GiP~~ivIG~kele~g~V~vr~R~tgeq~~v~~~e 403 (519)
T 4hvc_A 324 EEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENE 403 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEGGG
T ss_pred chhhHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHhcCCCEEEEECchhhcCCeEEEEECCCCCccceeHHH
Confidence 2456789999999999999999887743589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 000993 1177 LVRFLLDAIASQF 1189 (1196)
Q Consensus 1177 l~~~l~~~l~~~~ 1189 (1196)
+++.|++.++.+-
T Consensus 404 l~~~l~~ll~~i~ 416 (519)
T 4hvc_A 404 AETKLQAILEDIQ 416 (519)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999987776543
No 277
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=3.2e-28 Score=300.29 Aligned_cols=186 Identities=18% Similarity=0.166 Sum_probs=133.0
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
....+.|++|.+..++....|+.||||++...... ....+++.+|+++|+++ .|+||+++++++.
T Consensus 239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e------ 312 (569)
T 4azs_A 239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE------ 312 (569)
T ss_dssp ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE------
T ss_pred hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE------
Confidence 34578899999999888889999999999754211 12335699999999999 7999999998872
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|||||||+| +|.++|...+++++. .|+.||+.||+||
T Consensus 313 ----------------------------------d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~yl 355 (569)
T 4azs_A 313 ----------------------------------NAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAAL 355 (569)
T ss_dssp ----------------------------------CSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHH
Confidence 35678999999976 999999998889875 4789999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|||||||||+||||+.+|++||+|||+|+...... ...++.+||+.|||||++.+ .+..+
T Consensus 356 H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---------------~~~~t~vGTp~YmAPE~l~g--~~~~~ 418 (569)
T 4azs_A 356 EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---------------SWPTNLVQSFFVFVNELFAE--NKSWN 418 (569)
T ss_dssp HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC------------------CCSHHHHHHHHHHHHHHC---------
T ss_pred HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC---------------ccccCceechhhccHHHhCC--CCCCc
Confidence 99999999999999999999999999999998653221 12345689999999999987 46788
Q ss_pred chhHHHHHHHHHhhcC
Q 000993 616 ADMYSLGIVFFELWHP 631 (1196)
Q Consensus 616 sDVwSlGviLyELltP 631 (1196)
+|+||+|+++++|.++
T Consensus 419 ~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 419 GFWRSAPVHPFNLPQP 434 (569)
T ss_dssp ----------CCCCTT
T ss_pred ccccccccchhhhccc
Confidence 9999999999998754
No 278
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.93 E-value=3.1e-25 Score=265.63 Aligned_cols=315 Identities=10% Similarity=0.068 Sum_probs=226.7
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 807 (1196)
..++|+.+|+|.++.+++.|++.+++.++++||++|.||.| ++.. +.+.+.++||.|.|.+ |+.++|||
T Consensus 42 ~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v~d~g~~~~~~~l~LrP 121 (518)
T 3ial_A 42 YPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRP 121 (518)
T ss_dssp SSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEEEEETTEEEEEEEEECS
T ss_pred CCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCcccccccEEEEecCCCcccCcceeECC
Confidence 46799999999999999999999999999999999999999 3322 2455789999999976 68999999
Q ss_pred CCcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHHHHH---HHHHH-HH
Q 000993 808 ELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TR 875 (1196)
Q Consensus 808 D~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L-~~ 875 (1196)
+.|++++++++.. +.+|+|+||+|+|||+| +++. |.+||+|.++++||.....++.|++.+ ..+++ +.
T Consensus 122 t~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~~~~e~a~~e~~~~l~~~~~i~~~~ 201 (518)
T 3ial_A 122 TSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDE 201 (518)
T ss_dssp SSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEECCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988763 35699999999999998 5654 455799999999998888888877655 58888 88
Q ss_pred cCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 000993 876 FFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 955 (1196)
Q Consensus 876 lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 955 (1196)
||+. +.+..- ++ .++.
T Consensus 202 LGlp--~~~~~~--------------~~------------~e~~------------------------------------ 217 (518)
T 3ial_A 202 LCFK--GQKLRR--------------VC------------WDRF------------------------------------ 217 (518)
T ss_dssp TCCC--CEEEEE--------------CG------------GGCC------------------------------------
T ss_pred cCCc--EEeeec--------------Ch------------hhcc------------------------------------
Confidence 8885 443210 00 0100
Q ss_pred HHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccc
Q 000993 956 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLA 1035 (1196)
Q Consensus 956 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~ 1035 (1196)
.|. ...+.+|.-+.-|-..-.|++|..
T Consensus 218 ---~gA--------------------------------~yt~~iE~~~pdgr~ie~gt~~~L------------------ 244 (518)
T 3ial_A 218 ---PGA--------------------------------DYSEVSDVVMPCGRVLQTAGIHNL------------------ 244 (518)
T ss_dssp ---TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEE------------------
T ss_pred ---CCC--------------------------------ccceEEEEEcCCCCEEEEeceecc------------------
Confidence 000 012233332221211223333321
Q ss_pred cccccchhhhhccccccccccCCCCCCCcc-eecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC--------
Q 000993 1036 VGGRYDYLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG-------- 1100 (1196)
Q Consensus 1036 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~-------- 1100 (1196)
|- ++.++|+-. +...-|... .|-. -++++ +|++.+|.+ +...+...+|.+|.|+++..
T Consensus 245 -g~---~~s~rf~i~-y~d~~g~~~-~~h~~~~G~~-~R~iaaliE~~~de~Gl~lP~~LAP~qV~IiPi~~~~~~~~~~ 317 (518)
T 3ial_A 245 -GQ---RFSSTFDIL-YANKANESV-HPYLTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQES 317 (518)
T ss_dssp -ET---HHHHHTTCC-EECTTCCEE-CCEEEEEEEE-THHHHHHHHHHCBTTBCCCCGGGCSCSEEEEEESCSCTTCHHH
T ss_pred -cc---hhhhhcCcE-EECCCCCEe-eeEEeccchH-HHHHHHHHHHhCCCCccccCCccceEEEEEEEeecCccccccc
Confidence 11 223334311 011112222 2322 22333 999877641 22333346788999999863
Q ss_pred -CchHHHHHHHHHHHHHc-CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccchHH
Q 000993 1101 -GGLLVERMELVAELWEE-NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQRES 1176 (1196)
Q Consensus 1101 -~~~~~~a~~~a~~Lr~~-Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~--q~~v~~~e 1176 (1196)
+....+|.++++.|++. |++|+++...+.+++++++.|+.+|+|+.|+||++|+++|+|+|+++++++ +..+++++
T Consensus 318 ~~~~~~~a~~l~~~L~~~~Girv~~Ddr~~~s~G~K~~~ael~GvP~~i~vG~ke~e~g~V~vr~Rd~~~~~k~~v~~~e 397 (518)
T 3ial_A 318 DQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITE 397 (518)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEECCCTTSCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCGGGCEEEEHHH
T ss_pred hHHHHHHHHHHHHHHHhccCeEEEEECCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCccceeEeeHHH
Confidence 23567899999999999 999998776467999999999999999999999999999999999999999 99999999
Q ss_pred H
Q 000993 1177 L 1177 (1196)
Q Consensus 1177 l 1177 (1196)
+
T Consensus 398 l 398 (518)
T 3ial_A 398 V 398 (518)
T ss_dssp H
T ss_pred H
Confidence 9
No 279
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.87 E-value=2.3e-23 Score=255.46 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=133.7
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+.||+|+||+||+|.+ .++.+|+|+...+..... ..+++.+|+.+|+.++||||+++..++..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 356899999999999944 588999998765432221 13458999999999999999954433321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|||||||+ ++|.+++.. +..++.||++||+|||+
T Consensus 411 ---------------------------------~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~ 449 (540)
T 3en9_A 411 ---------------------------------LDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHK 449 (540)
T ss_dssp ---------------------------------TTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 123489999997 699999876 66899999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ks 616 (1196)
+||+||||||+|||++. ++||+|||+|+.......... +......+.+||+.|||||++... ..|+..+
T Consensus 450 ~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~--------~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~ 519 (540)
T 3en9_A 450 NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV--------DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY 519 (540)
T ss_dssp TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH--------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHC
T ss_pred CcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc--------chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999987643211000 000012356899999999998751 2378889
Q ss_pred hhHHHHHHHHHhh
Q 000993 617 DMYSLGIVFFELW 629 (1196)
Q Consensus 617 DVwSlGviLyELl 629 (1196)
|+||..+-..+..
T Consensus 520 d~ws~vl~~l~~v 532 (540)
T 3en9_A 520 DRWEIILELMKDV 532 (540)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999887666554
No 280
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=2.1e-21 Score=218.75 Aligned_cols=133 Identities=21% Similarity=0.183 Sum_probs=106.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----------------hhHHHHHHHHHHHHhcCCCCeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----------------PVNDRILREVATLSRLQHQHVVRY 445 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----------------~~~~~~~~Ev~iL~~L~HpnIV~l 445 (1196)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++...... .....+.+|+.+|+.++ | +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 456679999999999999999 789999999996432211 13456889999999999 4 555
Q ss_pred eeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHH
Q 000993 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHL 524 (1196)
Q Consensus 446 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i 524 (1196)
++++ + ....|+|||||+| +|.+ +.. .....+
T Consensus 167 ~~~~-~----------------------------------------~~~~~lvmE~~~g~~L~~-l~~------~~~~~i 198 (282)
T 1zar_A 167 PKVY-A----------------------------------------WEGNAVLMELIDAKELYR-VRV------ENPDEV 198 (282)
T ss_dssp CCEE-E----------------------------------------EETTEEEEECCCCEEGGG-CCC------SCHHHH
T ss_pred CeEE-e----------------------------------------ccceEEEEEecCCCcHHH-cch------hhHHHH
Confidence 5543 1 1234899999975 8887 421 335579
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
+.||+.||+|||++||+||||||+|||++ ++.+||+|||+|+
T Consensus 199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 99999999999999999999999999999 9999999999986
No 281
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.81 E-value=1.3e-18 Score=204.06 Aligned_cols=310 Identities=15% Similarity=0.051 Sum_probs=197.9
Q ss_pred ccc-ccchhhhHhhHHHHHHHHHHHHH-cC-Ccccccccee---ecCCCcccccceEEEeecCCceEeecCCCcHHHHHH
Q 000993 743 SSI-QYSDLDTELRDYVVQVTKEMFRQ-HC-AKHLEIEPMY---LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRW 816 (1196)
Q Consensus 743 G~~-D~~p~ea~~~~~I~~~i~~~f~~-~G-y~~I~tP~~~---~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~ 816 (1196)
|.. ||.|..+.+++.|++.++.-|.. .| +.+|+||... .+++++.+. ++||| +|+|..=.
T Consensus 94 g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~~~~~~~SGH~d~~~-------------~~LRP-eTaqg~~~ 159 (459)
T 3ikl_A 94 GCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFR-------------GGLRE-NLLHGALE 159 (459)
T ss_dssp TCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCSBCCSCCCSSCSCCT-------------TB-CS-CSHHHHHH
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhccCceEeeccccccccccCcchhhhc-------------ceECC-CCChhHHH
Confidence 444 99999999999999988877763 66 6669999972 233343333 89999 77765421
Q ss_pred H-----HhCC-CCceeEEEecCeeecCC----CC---CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 817 A-----ISNQ-KSSFKRYEISSVYRRAI----GH---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 817 ~-----a~~~-~~P~r~~Y~G~VfR~e~----~~---~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
. ..++ ..|+|++.+|++||+|. +. -|.+||+|+.+++|..++...+ ..++..+..+++.||+..
T Consensus 160 nfk~~~~s~r~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~Pe~~~e~~~~~~~~~~~~~~~LGi~~- 238 (459)
T 3ikl_A 160 HYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSP- 238 (459)
T ss_dssp HTTTTTGGGTTBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHCSSG-
T ss_pred HHhhhhhhccccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeChhHHHHHHHHHHHHHHHHHHHhCCCh-
Confidence 1 1122 46999999999999984 22 3556799999999998766444 367777888888888752
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
..+.+.+. . +++ ..+
T Consensus 239 ~~~r~~~~----------~-~ee----------A~~-------------------------------------------- 253 (459)
T 3ikl_A 239 SNFSSSDC----------Q-DEE----------GRK-------------------------------------------- 253 (459)
T ss_dssp GGEEEEEE----------C-CSS----------SSC--------------------------------------------
T ss_pred hhEEEeec----------C-chH----------HHh--------------------------------------------
Confidence 22222210 0 000 000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
.+.+...+.-| -+. |+..+.-..+ .........|=+|-
T Consensus 254 ----------------------------------~~DiE~~~p~G----~~E-~~g~sn~tDf---qL~~~~~~~~~~~~ 291 (459)
T 3ikl_A 254 ----------------------------------GNKLYYNFPWG----KEL-IETLWNLGDH---ELLHMYPGNVSKLH 291 (459)
T ss_dssp ----------------------------------EEEEEEECSSC----EEE-EEEEEEEETH---HHHHHSCSCSSSSC
T ss_pred ----------------------------------hcCeEEEcCCc----eEE-Eeeeeccchh---hhhccccccCceeE
Confidence 11111111101 000 0000000000 00000011111111
Q ss_pred hhhhhccccccccccCCCCCCCc-ceecccHHHHH-hhccCC------------------CCCCCCCCCceEEEEEcC--
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSG-VGASLALETII-QHYPVD------------------FKPVRNEAGTSVLVCSRG-- 1099 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pA-vGfaiglerl~-~~L~~~------------------~~~~~~~~~~~vlv~~~~-- 1099 (1196)
..-|.++.+|. +.-++|++|++ .+|++. ...+...+|.+|.|+ ..
T Consensus 292 ------------~~dg~~k~~P~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~qV~Ii-i~~~ 358 (459)
T 3ikl_A 292 ------------GRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALD-VGRG 358 (459)
T ss_dssp ------------CBSSSCBCCCEEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCCEEEE-ESSC
T ss_pred ------------ccCCCeeeeeEEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCceEEEE-eCCC
Confidence 01122223454 47789999975 555421 122223578888888 43
Q ss_pred -CCchHHHHHHHHHHHHHcCCeEEEeeCC--CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHH
Q 000993 1100 -GGGLLVERMELVAELWEENIKAQFVPVP--DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRES 1176 (1196)
Q Consensus 1100 -~~~~~~~a~~~a~~Lr~~Gi~vel~~~~--~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~e 1176 (1196)
+++...+|.+++++||+.|++|++.++. +.++++++++|++.|+||+|+||++|+++|+|+||++++++|..+++++
T Consensus 359 ~~e~~~~~A~~L~~~Lr~~GIrV~~d~Ddr~~~siGkK~r~Ad~iGiPy~IiVG~kEle~g~VtVR~Rdtgeq~~v~lde 438 (459)
T 3ikl_A 359 PTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISK 438 (459)
T ss_dssp CSTTHHHHHHHHHHHHHHTSCCEECGGGSSSCCTTHHHHHHHGGGTCSEEEEECTTSTTSSEEEEEETTTCCCCCEETTH
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEeecCCcCCCHHHHHHHHHHcCCCEEEEECchhhhCCEEEEEECCCCceEEEEHHH
Confidence 2567889999999999999999843332 4799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 000993 1177 LVRFLLDAIAS 1187 (1196)
Q Consensus 1177 l~~~l~~~l~~ 1187 (1196)
+++.|++.+++
T Consensus 439 li~~l~~~i~~ 449 (459)
T 3ikl_A 439 LKDFLIKYISS 449 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988775
No 282
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.80 E-value=5e-20 Score=219.14 Aligned_cols=318 Identities=14% Similarity=0.065 Sum_probs=197.4
Q ss_pred ccc-ccchhhhHhhHHHHHHHHHH-H-HHcCCccccccce----eecCC--Cc-----ccccc----------eEEEe-e
Q 000993 743 SSI-QYSDLDTELRDYVVQVTKEM-F-RQHCAKHLEIEPM----YLLGD--CP-----QFKRN----------TVKLL-T 797 (1196)
Q Consensus 743 G~~-D~~p~ea~~~~~I~~~i~~~-f-~~~Gy~~I~tP~~----~~~~~--~~-----~~~~~----------my~f~-D 797 (1196)
|+. ||+|..+.+++.|++.+++. | .+.||.+|.||++ ++... +. .+.++ ||.+. +
T Consensus 52 G~~~~~~P~G~~l~~~i~~~~~~~~~~~~~g~~ev~tp~l~~~~~~~~s~~g~~~r~d~~~e~~~~~g~~~eem~~~~~~ 131 (454)
T 1g5h_A 52 GCHARFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREILQDREPSKEQLVAFLEN 131 (454)
T ss_dssp CCSCCBCHHHHHHHHHHHHHHHHHHTTTCTTEEECCCCSEECCCCSSCCCCCEEECHHHHHHHHCC---CHHHHHHHHHH
T ss_pred cceeeeCchHHHHHHHHHHHHHHHHhhhcCCeEEEEcCccCChhhccccccCcccHHHHHHHHhhccCCCHHHHHHHHHh
Confidence 777 99999999999999988887 4 6999999999998 22211 11 22222 33221 1
Q ss_pred cCCceEeecCCCcHHH-----HHHHHhCC-CCceeEEEecCeee---cCC-CC---CCCcceeEeEEEEeCCCCccch--
Q 000993 798 HGGDLLELSHELRLPF-----IRWAISNQ-KSSFKRYEISSVYR---RAI-GH---SPPNRYLQGDFDIIGGASALTE-- 862 (1196)
Q Consensus 798 ~~G~~laLRPD~T~~i-----aR~~a~~~-~~P~r~~Y~G~VfR---~e~-~~---~~~~ef~Q~GvEiiG~~~~~aD-- 862 (1196)
..++.+.||| +|+|. .+.+..++ ..|++++++|++|| +|. +. .|.|||+|.++++|+..+...+
T Consensus 132 ~~~~~~~LRP-eta~g~~~~f~~~~~s~r~~LP~~~aqig~~fR~~~nE~s~~~Gl~R~REF~q~E~~~F~~pe~~~e~~ 210 (454)
T 1g5h_A 132 LLKTSGKLRA-TLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPTRTSSQWL 210 (454)
T ss_dssp HHHHSCEECS-CSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECHHHHHHHH
T ss_pred hcCcceeecc-cccHHHHHHHhhhHhhcccCCCEEEEEeeeeccCCcccccCCCCccccCceehhheEEEeCHhhHHHHH
Confidence 1246789999 77753 23333344 67999999999999 574 32 2445799999999985322111
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcC
Q 000993 863 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELN 942 (1196)
Q Consensus 863 aEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~ 942 (1196)
..++.+..+++..||+.. ..+.+.. . -
T Consensus 211 ~~~~~~~~~~~~~lgi~~-~~~r~~~----------~----------------~-------------------------- 237 (454)
T 1g5h_A 211 DFWLRHRLLWWRKFAMSP-SNFSSAD----------C----------------Q-------------------------- 237 (454)
T ss_dssp HHHHHHHHHHHHTTCSSG-GGEEEEE----------E----------------E--------------------------
T ss_pred HHHHHHHHHHHHHcCCCc-eeEEecC----------C----------------H--------------------------
Confidence 123555556666666542 1111100 0 0
Q ss_pred CcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC
Q 000993 943 LAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE 1022 (1196)
Q Consensus 943 l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~ 1022 (1196)
+. + + ...+.++..+. +.-+. |++.
T Consensus 238 -----------------~~--~----a------------------------~~~~~ie~~~p----~g~~e-~~g~---- 261 (454)
T 1g5h_A 238 -----------------DE--L----G------------------------RKGSKLYYSFP----WGKEP-IETL---- 261 (454)
T ss_dssp -----------------CT--T----S------------------------CEEEEEEEEET----TEEEE-EEEE----
T ss_pred -----------------HH--H----H------------------------hcCCCcEEecC----CCceE-EEEe----
Confidence 00 0 0 00111111110 11111 1111
Q ss_pred CCccccccccccccccccchh----hhhccccccccccCCC-CCCCcc-eecccHHHHH-hhccCCC-------------
Q 000993 1023 KYPATLVEGTLLAVGGRYDYL----LHRMWDREYVGYASRT-NPPSGV-GASLALETII-QHYPVDF------------- 1082 (1196)
Q Consensus 1023 ~~~~~~~~~~~I~~GGRYD~L----~~~fg~~~~~~~~g~~-~~~pAv-Gfaiglerl~-~~L~~~~------------- 1082 (1196)
..++=||-. .++|+ ..+.+.+ ..+|.| +.++|++|++ .+|.++.
T Consensus 262 ------------~~~td~~l~~~~~~s~~~----l~y~d~~~~~~P~vi~~s~Gv~R~i~aile~~~~~~~~~~~~g~d~ 325 (454)
T 1g5h_A 262 ------------WNLGDQELLHTYPGNVST----IQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSL 325 (454)
T ss_dssp ------------EEEESHHHHHHSTTCGGG----SCEEETTEEECCEEEEEEEEHHHHHHHHHHHHEEC-----------
T ss_pred ------------cCCCHHHHHhccCCceee----EEEECCCCcEeeEEEeCcccHHHHHHHHHHHhcchhhcccccCCcc
Confidence 111111100 01111 1111112 235766 8899999996 5554211
Q ss_pred -----CCCCCCCCceEEEE-EcC-CCchHHHHHHHHHHHHHcCCeEE--EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCc
Q 000993 1083 -----KPVRNEAGTSVLVC-SRG-GGGLLVERMELVAELWEENIKAQ--FVPVPDPSLTEQYEYASEHDIKCLVILTDTG 1153 (1196)
Q Consensus 1083 -----~~~~~~~~~~vlv~-~~~-~~~~~~~a~~~a~~Lr~~Gi~ve--l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E 1153 (1196)
..+...+|.+|+|+ +.+ ++....+|.+++++||++|++|+ ++...+.++++++++|++.|+||+|+||++|
T Consensus 326 ~r~~l~~P~~lAP~qV~Ii~~~~~~e~~~~~A~~l~~~Lr~~Gi~v~~~~Ddr~~~sigkk~r~Ad~~GiP~~IiVG~~E 405 (454)
T 1g5h_A 326 QRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETT 405 (454)
T ss_dssp -CCEECCCTTTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHH
T ss_pred cceeEecCcccCCCeEEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCHHHHHHHHHHcCCCEEEEECcch
Confidence 12223567899998 552 13567889999999999999996 4432256899999999999999999999999
Q ss_pred ccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1154 AQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1154 ~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
+++|+|+||++++++|..++++++++.|++.++
T Consensus 406 le~g~VtvR~r~t~eq~~v~l~el~~~l~~~l~ 438 (454)
T 1g5h_A 406 LENGLIQLRSRDTTMKEMMHISKLRDFLVKYLA 438 (454)
T ss_dssp HHHCEEEEEETTTCCEEEEETTSHHHHHHHHHH
T ss_pred hhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHh
Confidence 999999999999999999999999999987765
No 283
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=2.6e-18 Score=190.85 Aligned_cols=137 Identities=21% Similarity=0.246 Sum_probs=107.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCc----------------------hhHHHHHHHHHHHHhcC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 438 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~L~ 438 (1196)
|++.+.||+|+||.||+|.+..+|+. ||||+++...... .....+.+|+..|+.+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999778999 9999976432110 11236789999999999
Q ss_pred CCCe--eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC--C----CHHHHH
Q 000993 439 HQHV--VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--R----TLRQVF 510 (1196)
Q Consensus 439 HpnI--V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~--g----sL~~~l 510 (1196)
|++| +.++.. ...++|||||+ | +|.++.
T Consensus 129 ~~~i~~p~~~~~--------------------------------------------~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY--------------------------------------------MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE--------------------------------------------ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc--------------------------------------------CCCEEEEEecCCCCCccccHHHHh
Confidence 8865 222211 12389999995 3 677665
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 511 ESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 511 ~~~~~l~e~~~~~i~~qIa~gL~yLH-s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.. .++..+..++.||+.||.||| ++||+||||||+|||++. .++|+|||+|..
T Consensus 165 ~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 165 RE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp GG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred hc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence 33 234567889999999999999 999999999999999998 999999999974
No 284
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=1.2e-15 Score=177.38 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=95.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------chhHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
|++.+.||.|+||.||+|.+. +|+.||||+++....+ .........++++.....|+|+++++...+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999986 7999999998642111 001112222333333334445444432211
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa 529 (1196)
... .. ......+|||||++| .|.++. ..+.+..++.||+
T Consensus 176 ~vp-----------------~p-----------------~~~~~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll 215 (397)
T 4gyi_A 176 PVP-----------------EP-----------------IAQSRHTIVMSLVDALPMRQVS------SVPDPASLYADLI 215 (397)
T ss_dssp SCC-----------------CE-----------------EEEETTEEEEECCSCEEGGGCC------CCSCHHHHHHHHH
T ss_pred CCC-----------------ee-----------------eeccCceEEEEecCCccHhhhc------ccHHHHHHHHHHH
Confidence 000 00 000112799999987 665432 1234567889999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCC----------eEEeccCcch
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARND----------IKIGDFGLAK 567 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~----------vKL~DFGlA~ 567 (1196)
.+|.|||++|||||||||.|||++.++. +.|+||+-+-
T Consensus 216 ~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 216 ALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp HHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence 9999999999999999999999988763 8899999775
No 285
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=99.51 E-value=2.2e-14 Score=169.32 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=120.5
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+.+++|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+...++||++. ++.++|||+.|+|++
T Consensus 161 g~G~~~~~p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~---~~~l~LrPt~e~~i~ 237 (425)
T 2dq3_A 161 GSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE---RDNLYLIPTAEVPLT 237 (425)
T ss_dssp CSSCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT---TTCCEECSSTHHHHH
T ss_pred CCCceEECcHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEec---CCeEEEcCCCcHHHH
Confidence 589999999999999999999999999999999999999 22 233456788999885 478999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCc--cchHHHHHHHHHHHHHcCCCC
Q 000993 815 RWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 815 R~~a~~----~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~--~aDaEvI~la~~~L~~lgi~~ 880 (1196)
++++.. ...|+|+||+|+|||+|.++. |.++|+|+++++||.++. ..+.|++.++.++|+.||+.
T Consensus 238 ~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~s~~~~~e~i~~~~~il~~LGL~- 316 (425)
T 2dq3_A 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP- 316 (425)
T ss_dssp GGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 998763 356999999999999988542 445699999999998764 23479999999999999996
Q ss_pred ceE-EEeCc
Q 000993 881 SCD-IHLNH 888 (1196)
Q Consensus 881 ~~~-i~Lg~ 888 (1196)
|+ +.+..
T Consensus 317 -~rvv~l~~ 324 (425)
T 2dq3_A 317 -YRVVELCT 324 (425)
T ss_dssp -EEEEECCT
T ss_pred -eEEEEecC
Confidence 66 55544
No 286
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=9e-14 Score=137.49 Aligned_cols=87 Identities=32% Similarity=0.420 Sum_probs=80.5
Q ss_pred CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 16 GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+++|+|.+.++.+++++.+.+.|.|+||++||+++|.+.|...++|++.++..|.+.|.+++++|+ ||+|||+||+.+
T Consensus 37 ~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~l~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~l 114 (128)
T 2ebm_A 37 PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVMIFTLVTAV 114 (128)
T ss_dssp SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHT--TSCCHHHHHHHH
T ss_pred CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHH
Confidence 578999998876665567899999999999999999999999889999999999999999999999 999999999999
Q ss_pred HHHHHhhCC
Q 000993 96 QEFLSEIVP 104 (1196)
Q Consensus 96 ~e~l~~~~~ 104 (1196)
||+|++++.
T Consensus 115 qe~l~e~~~ 123 (128)
T 2ebm_A 115 QEKLNEIVD 123 (128)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 287
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.3e-13 Score=138.09 Aligned_cols=90 Identities=20% Similarity=0.246 Sum_probs=80.5
Q ss_pred CCCCcC-CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 000993 10 SGRRSK-GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMI 88 (1196)
Q Consensus 10 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~mi 88 (1196)
+||..+ +++|+|.+.+..+ ++..+.+.|.|+||++||+++|.+.|...+||++.++..|.+.|.+++++|+ ||+||
T Consensus 38 ~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mi 114 (138)
T 2yz0_A 38 SSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTSR--GQEII 114 (138)
T ss_dssp SSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECCCSCCSHHHHHHHHHHHHHHHHST--TSCCH
T ss_pred ccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEH
Confidence 466633 4799999987654 2346899999999999999999999999999999999999999999999999 99999
Q ss_pred EeeHHHHHHHHHhh
Q 000993 89 FNLVEAAQEFLSEI 102 (1196)
Q Consensus 89 ftl~~~~~e~l~~~ 102 (1196)
|+||+.+||||+++
T Consensus 115 f~lv~~lqe~l~~~ 128 (138)
T 2yz0_A 115 FEITSFTQEKLDEF 128 (138)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999998
No 288
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=99.40 E-value=9.1e-13 Score=148.42 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=89.8
Q ss_pred chhhhHhhHHHHHHHHHHHHHcCCccccccceeec-----C--CCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC
Q 000993 748 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL-----G--DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 820 (1196)
Q Consensus 748 ~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~-----~--~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~ 820 (1196)
.....+++..+.+.++++|.++||.+|+||++... . .++. .++|.+. ..|+.+.||..-.....+.++
T Consensus 11 ~~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~~~~~~~~~~~e~--a~~f~~~-~~~~~~~L~~Spe~~~~~l~~-- 85 (294)
T 1nnh_A 11 ISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEG--MEPAEVE-IYGVKMRLTHSMILHKQLAIA-- 85 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCC--CCCCEEE-ETTEEEEECSCSHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEccchhccCCCCCc--ceeEEEE-cCCCCEEeccChHHHHHHHhh--
Confidence 34568899999999999999999999999999443 1 2222 5677653 346678887433333334443
Q ss_pred CCCceeEEEecCeeecCCCCC---CCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcC
Q 000993 821 QKSSFKRYEISSVYRRAIGHS---PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFF 877 (1196)
Q Consensus 821 ~~~P~r~~Y~G~VfR~e~~~~---~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lg 877 (1196)
..+.|+||+|+|||+|.||. +.+ ||+|+++|++|.+ +.|++.++.+.++.+.
T Consensus 86 -~g~~rvf~ig~~FR~E~pq~~~~RH~~EFtqle~e~~~~~----~~~l~~~~e~l~~~l~ 141 (294)
T 1nnh_A 86 -MGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK----MEDIMRLIERLVYGLF 141 (294)
T ss_dssp -TTCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHHH
T ss_pred -cCccceEEEEccEeCCCCCCCCCccccceeEEEEEecCCC----HHHHHHHHHHHHHHHH
Confidence 24789999999999999663 334 7999999999974 7899999999988763
No 289
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=99.40 E-value=2.5e-13 Score=134.33 Aligned_cols=86 Identities=21% Similarity=0.367 Sum_probs=76.3
Q ss_pred CCcceEeecCCCCCCC--CccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeH
Q 000993 15 KGRAQSKDHSSSTVDD--NELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLV 92 (1196)
Q Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~ 92 (1196)
.+++|+|.+.+..+++ ...+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||
T Consensus 38 ~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv 115 (128)
T 2day_A 38 SPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELI 115 (128)
T ss_dssp CCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHH
T ss_pred CCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHH
Confidence 3568888887654432 236899999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhh
Q 000993 93 EAAQEFLSEI 102 (1196)
Q Consensus 93 ~~~~e~l~~~ 102 (1196)
+.+||||.+.
T Consensus 116 ~~lqe~l~~~ 125 (128)
T 2day_A 116 EKGKEILSGP 125 (128)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHHHhc
Confidence 9999999753
No 290
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=99.39 E-value=5.9e-13 Score=156.80 Aligned_cols=142 Identities=8% Similarity=0.099 Sum_probs=118.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+.+|.|..+.+++.|++.+++.+.++||++|.||.| ++ .++.+.+.++||++.| +.++|||..|++++
T Consensus 155 g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~L~Pt~e~~~~ 231 (421)
T 1ses_A 155 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 231 (421)
T ss_dssp CSSCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHH
T ss_pred CCCeEEECcHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC---CeEEEeecCcHHHH
Confidence 479999999999999999999999999999999999999 22 2345567899999865 78999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeeecC-----CCCCC---CcceeEeEEEEeCCCC-ccchH---HHHHHHHHHHHHcCC
Q 000993 815 RWAISN----QKSSFKRYEISSVYRRA-----IGHSP---PNRYLQGDFDIIGGAS-ALTEA---EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~~----~~~P~r~~Y~G~VfR~e-----~~~~~---~~ef~Q~GvEiiG~~~-~~aDa---EvI~la~~~L~~lgi 878 (1196)
+++... ...|+|+|++|+|||+| +++.| .++|+|+++..|+.++ ..++. |++.++.++|+.||+
T Consensus 232 ~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~~~il~~LGL 311 (421)
T 1ses_A 232 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 311 (421)
T ss_dssp HTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988763 24699999999999998 55544 4569999999888762 23443 999999999999999
Q ss_pred CCceE-EEeC
Q 000993 879 AESCD-IHLN 887 (1196)
Q Consensus 879 ~~~~~-i~Lg 887 (1196)
. +. +.+.
T Consensus 312 ~--~rvv~l~ 319 (421)
T 1ses_A 312 P--YRLVEVA 319 (421)
T ss_dssp C--EEEEECC
T ss_pred c--eEEEEec
Confidence 5 66 4444
No 291
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=99.39 E-value=5.8e-13 Score=158.01 Aligned_cols=144 Identities=8% Similarity=0.034 Sum_probs=119.5
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
...|+.+++|..+.+++.|++.+++.+.++||++|.||.| ++.+ +.+.+.++||++.| +.++|||..|+++
T Consensus 181 ~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~LrPt~e~~~ 257 (455)
T 2dq0_A 181 SGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVED---EDLYLIPTAEHPL 257 (455)
T ss_dssp TCTTCCEEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBBTT---SSCEECSSTHHHH
T ss_pred cCCCeEEECCHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCeecC---CcEEEcCcCcHHH
Confidence 3579999999999999999999999999999999999999 3333 34556889999864 6899999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCcc--chHHHHHHHHHHHHHcCCC
Q 000993 814 IRWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASAL--TEAEVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 814 aR~~a~~----~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~~--aDaEvI~la~~~L~~lgi~ 879 (1196)
++++... ...|+|+|++|+|||+|.++. |.++|+|+.+.+|+.+... .-.|++.++.++|+.||+.
T Consensus 258 ~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe~s~~~~~e~l~~~~~il~~LGL~ 337 (455)
T 2dq0_A 258 AGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP 337 (455)
T ss_dssp HHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9988763 356999999999999998754 4456999999988877421 1129999999999999995
Q ss_pred CceEEEeCc
Q 000993 880 ESCDIHLNH 888 (1196)
Q Consensus 880 ~~~~i~Lg~ 888 (1196)
+.+....
T Consensus 338 --yrv~~~~ 344 (455)
T 2dq0_A 338 --YRVVNIC 344 (455)
T ss_dssp --EEEEECC
T ss_pred --eEEEECC
Confidence 7766654
No 292
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=99.37 E-value=4.9e-13 Score=133.78 Aligned_cols=89 Identities=26% Similarity=0.404 Sum_probs=78.9
Q ss_pred CCcceEeecCCCCCC-CCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHH
Q 000993 15 KGRAQSKDHSSSTVD-DNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVE 93 (1196)
Q Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~ 93 (1196)
.+++|+|.+.+++++ .+..+.+.|.|+||++||+++|.+.|...++|++.++..|.+.|.+++++|+ ||+|||+||+
T Consensus 43 ~~~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~ 120 (137)
T 1ukx_A 43 EPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAH 120 (137)
T ss_dssp CCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCHHHHHH
T ss_pred CCcEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHH
Confidence 357999999875433 2236899999999999999999999988899999999999999999999999 9999999999
Q ss_pred HHHHHHHhhCCC
Q 000993 94 AAQEFLSEIVPL 105 (1196)
Q Consensus 94 ~~~e~l~~~~~~ 105 (1196)
.+||||+++..+
T Consensus 121 ~lqe~l~~~~~p 132 (137)
T 1ukx_A 121 HVQSFLSEHNKS 132 (137)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHhcCCC
Confidence 999999987643
No 293
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=99.34 E-value=1.6e-12 Score=145.82 Aligned_cols=130 Identities=8% Similarity=-0.032 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHcCCcccccccee----ecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCCceeE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKSSFKR 827 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~P~r~ 827 (1196)
.+.+++.++++|..+||++|.||.|+ +...+....++||++.++.++.++|||.+++..++++..+ +..|+|+
T Consensus 73 ~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~~~~m~~~~npl~e~~~LRp~l~p~l~~~~r~~~~~~~~Plrl 152 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRI 152 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCcccccEEeecccccchhhhhcChHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999999999999999992 2222221122577666555577899999888877655442 4569999
Q ss_pred EEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 828 YEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|++|+|||+|.++. +.+||+|++++++|..+...++|++.++.++|+.||+++ +.+.
T Consensus 153 feiG~vFR~E~~~~~r~~EF~qle~~i~g~~~~~~f~elkg~le~ll~~LGl~~-~~~~ 210 (288)
T 3dsq_A 153 FEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIRE-FELV 210 (288)
T ss_dssp EEEEEEECSCCSSSCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHHHHHTCCC-CEEE
T ss_pred EEEeeEEecCCCCCCcCccEEEEEEEEEcCCchhhHHHHHHHHHHHHHHcCCCC-cEEe
Confidence 99999999987764 445799999999999888889999999999999999964 5553
No 294
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=9.5e-13 Score=130.12 Aligned_cols=86 Identities=21% Similarity=0.191 Sum_probs=77.0
Q ss_pred CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 16 GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+++|+|.+..+..+ +..+.+.|+|+||++||+++|.+.|. .++|++.++..|.+.|.+++++|+ ||+|||+||+.+
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~-~~~L~~~~~~~l~~~L~~~~~e~~--G~~mif~lv~~l 114 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISIN-SEQLTRAQCVTVKEKLLEQAESLL--SEPMVHELVLWI 114 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCC-CSSSCHHHHHHHHHHHHHHHHHTT--TSCHHHHHHHHH
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEE-hhhCCHHHHHHHHHHHHHHHHHhC--CcchHHHHHHHH
Confidence 46899998876532 23589999999999999999999998 589999999999999999999999 999999999999
Q ss_pred HHHHHhhCCC
Q 000993 96 QEFLSEIVPL 105 (1196)
Q Consensus 96 ~e~l~~~~~~ 105 (1196)
||+|++++..
T Consensus 115 qe~l~~~~~~ 124 (128)
T 2ebk_A 115 QQNLRHILSQ 124 (128)
T ss_dssp TTSHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 295
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.29 E-value=2e-12 Score=154.81 Aligned_cols=147 Identities=7% Similarity=0.051 Sum_probs=119.2
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHH-HHHHcCCccccccce----ee--cCCCcccccceEEEe-----e-
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKE-MFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLL-----T- 797 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~-~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~-----D- 797 (1196)
..+.+.- -...|+.+|.|..+.+++.|++.+++ ++.++||++|.||+| ++ .++.+.+.++||++. |
T Consensus 211 raG~i~~-~~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~~~~~Rd~ 289 (522)
T 2cja_A 211 KEGWLKR-GSSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDP 289 (522)
T ss_dssp HTTSEEE-CSSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEECBSCCCH
T ss_pred HCCCeee-eCCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeeecCCccch
Confidence 3444432 26799999999999999999999996 589999999999999 22 344666789999995 3
Q ss_pred ------------------------cCCceEeecCCCcHHHHHHHHhC----CCCceeEEE-ecCeeecCCCC-----CCC
Q 000993 798 ------------------------HGGDLLELSHELRLPFIRWAISN----QKSSFKRYE-ISSVYRRAIGH-----SPP 843 (1196)
Q Consensus 798 ------------------------~~G~~laLRPD~T~~iaR~~a~~----~~~P~r~~Y-~G~VfR~e~~~-----~~~ 843 (1196)
.+++.++|||+.+.++++++... ...|+|+|+ +|++||+| ++ .|.
T Consensus 290 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~ 368 (522)
T 2cja_A 290 DYWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERV 368 (522)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSC
T ss_pred hhhhhhhhhhhccccccccccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEe
Confidence 14789999999999999988752 246999999 99999999 66 455
Q ss_pred cceeEeEEEEeCCCCccch--HHHH-HHHHHHHHHcCCC
Q 000993 844 NRYLQGDFDIIGGASALTE--AEVL-KVTMDIVTRFFHA 879 (1196)
Q Consensus 844 ~ef~Q~GvEiiG~~~~~aD--aEvI-~la~~~L~~lgi~ 879 (1196)
+||+|.++++||.++...+ .+++ ..+..+++.||+.
T Consensus 369 REF~q~E~~~F~~pe~s~ee~ee~i~~~~~~~l~~LGLp 407 (522)
T 2cja_A 369 DEFHRIEIVWIGTKEEVLKCAEELHDRYMHIFNDILDIE 407 (522)
T ss_dssp SEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred EEEEEeeEEEEeChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6799999999997655332 4678 8889999999996
No 296
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=138.14 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=115.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeec--------CCceEeec
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--------GGDLLELS 806 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--------~G~~laLR 806 (1196)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| ++ .++.+.+.++||++.|. .++.++|+
T Consensus 190 Gsgfy~l~p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v~~~g~~~~~~~~~~~l~L~ 269 (522)
T 3vbb_A 190 GSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLI 269 (522)
T ss_dssp STTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEEC------------CCEEEC
T ss_pred CcceEEEcCHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEeecCCccccccccCcceeEc
Confidence 468899999999999999999999999999999999999 22 34467788999999876 36789999
Q ss_pred CCCcHHHHHHHHh----CCCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCc-cch---HHHHHHHH
Q 000993 807 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA-LTE---AEVLKVTM 870 (1196)
Q Consensus 807 PD~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~-~aD---aEvI~la~ 870 (1196)
|...+|++.++.. +..+|+|+|++|+|||+|.++. |.++|+|+++.+|+.+.. .++ .+++.++.
T Consensus 270 PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~e~ml~~~e 349 (522)
T 3vbb_A 270 ATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAE 349 (522)
T ss_dssp SSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHHHHHHHHHH
Confidence 9888999887654 2356999999999999987531 344699999999998764 233 48899999
Q ss_pred HHHHHcCCCCceEEEe
Q 000993 871 DIVTRFFHAESCDIHL 886 (1196)
Q Consensus 871 ~~L~~lgi~~~~~i~L 886 (1196)
++|+.||+. |++..
T Consensus 350 ~il~~LGLp--yrvv~ 363 (522)
T 3vbb_A 350 EFYQSLGIP--YHIVN 363 (522)
T ss_dssp HHHHHTTCC--EEEEE
T ss_pred HHHHHcCCc--eEEEE
Confidence 999999995 66543
No 297
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=99.11 E-value=3.4e-10 Score=127.51 Aligned_cols=123 Identities=11% Similarity=0.126 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC--------CCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG--------DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~--------~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~ 823 (1196)
+..+.+.+++.|..+||.+|.||+|+... ......+.||.| ++..+|||++++++.+.++.+ ...
T Consensus 79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~LR~slsp~L~~~l~~n~~~~~~ 154 (290)
T 3qtc_A 79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLTPNLYNYLRKLDRALPD 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEE----TTTEEECSCSHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheee----CCCeeEcccChHHHHHHHHHhhccCCC
Confidence 46899999999999999999999992211 122234567766 367999999999999988874 356
Q ss_pred ceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 824 SFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|.|+|++|+|||+|..+. +..||+|++++++|... .+.|+..++.++|+.+|++ +.+.
T Consensus 155 p~rlfeiG~vFR~E~~~~~~~~Ef~ql~~~~~g~~~--~f~elkg~le~ll~~lGl~--~~~~ 213 (290)
T 3qtc_A 155 PIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGC--TRENLESIITDFLNHLGID--FKIV 213 (290)
T ss_dssp SEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTTC--CHHHHHHHHHHHHHHHTCC--CEEE
T ss_pred CeEEEEEcCEEecCCCCCcCcchheEEEEEEEcCCh--HHHHHHHHHHHHHHHcCCC--cEEe
Confidence 999999999999986654 44579999999999763 5789999999999999983 6553
No 298
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=99.08 E-value=4.1e-10 Score=109.52 Aligned_cols=102 Identities=7% Similarity=0.018 Sum_probs=92.8
Q ss_pred CCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcC
Q 000993 1087 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1165 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~-~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~ 1165 (1196)
...|.++.|++++ +....+|.+++++|++.|++|+++.. ++.+|++.++.|...++||+++||++|.++++|+|+.+.
T Consensus 5 ~~~P~Qv~IlpVs-~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~ 83 (130)
T 1v95_A 5 SSGPVDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMF 83 (130)
T ss_dssp CCCCCTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECS
T ss_pred CCCCCeEEEEEeC-cchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecC
Confidence 3467899999996 78899999999999999999999884 257999999999999999999999999999999999999
Q ss_pred C--CcccccchHHHHHHHHHHHHhhc
Q 000993 1166 V--KKEKEVQRESLVRFLLDAIASQF 1189 (1196)
Q Consensus 1166 ~--g~q~~v~~~el~~~l~~~l~~~~ 1189 (1196)
. +++..+++++++..|.+.++.++
T Consensus 84 ~~~~e~~~m~lde~i~~l~~~~~~~~ 109 (130)
T 1v95_A 84 GTPQEHRNMPQADAMVLVARNYERYK 109 (130)
T ss_dssp SSCCEEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCccCccCHHHHHHHHHHHHHHHh
Confidence 8 88899999999999988877664
No 299
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=99.04 E-value=4.7e-10 Score=133.95 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=116.3
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCccccc-ceEEEeecCCceEeecCCCcHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKR-NTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~-~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|+..|.|..+.+.+.|++.+++.+.++||++|.||.| ++. +..+.+.+ +||++.|.+++.++|||.-++++
T Consensus 208 G~g~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v~~~~~~~l~L~PTaE~~~ 287 (501)
T 1wle_A 208 GHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGL 287 (501)
T ss_dssp CTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSCEECSSHHHHH
T ss_pred cCceEEEcChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEEecCCCCeEEECCcCcHHH
Confidence 478888899999999999999999999999999999999 222 33444556 99999887788999999888899
Q ss_pred HHHHHh----CCCCceeEEEecCeeecCCC----CC---CCcceeEeEEEEeCCCC-cc---chHHHHHHHHHHHHHcCC
Q 000993 814 IRWAIS----NQKSSFKRYEISSVYRRAIG----HS---PPNRYLQGDFDIIGGAS-AL---TEAEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 814 aR~~a~----~~~~P~r~~Y~G~VfR~e~~----~~---~~~ef~Q~GvEiiG~~~-~~---aDaEvI~la~~~L~~lgi 878 (1196)
+.++.. +..+|+|+|++|++||+|.. .. |.++|+|+++.+|+.+. .. .-.+++.++.++|+.||+
T Consensus 288 ~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~~~~~il~~LgL 367 (501)
T 1wle_A 288 AGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGL 367 (501)
T ss_dssp HHHHTTEEEEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988865 23569999999999999865 22 33469999999999874 22 234889999999999999
Q ss_pred CCceEE
Q 000993 879 AESCDI 884 (1196)
Q Consensus 879 ~~~~~i 884 (1196)
. |.+
T Consensus 368 p--yrv 371 (501)
T 1wle_A 368 H--FRV 371 (501)
T ss_dssp C--EEE
T ss_pred c--EEE
Confidence 5 665
No 300
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=99.03 E-value=2.4e-10 Score=116.28 Aligned_cols=87 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred ceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHH-HhhhCCCeEEEeeHHHHH
Q 000993 18 AQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQAN-SNAREGRVMIFNLVEAAQ 96 (1196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~-enl~~Gm~miftl~~~~~ 96 (1196)
+|+|.++.+..+ +..+.+.|+|+||++||+++|.+.|.... ++..+...|.+.|.+.++ +|+ ||+|||++|+.+|
T Consensus 58 ~f~I~l~~~~~~-~~~~~l~L~v~lP~~YP~~~P~i~l~~~~-l~~~~~~~L~~~L~~~~~~~~~--G~~mif~lv~~lq 133 (152)
T 2dax_A 58 YFTINMNLDVSD-EKMAMFSLACILPFKYPAVLPEITVRSVL-LSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVR 133 (152)
T ss_dssp EEEEEEEEECST-TCEEEEEEEEEECSSTTSSCCCCEEECTT-SCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHH
T ss_pred EEEEEEecCCCC-ccCceEEEEEECCCCCCCCCCeEEEEccc-CCHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHH
Confidence 777877654332 34688999999999999999999999865 677778888887888775 699 9999999999999
Q ss_pred HHHHhhCCCCcc
Q 000993 97 EFLSEIVPLGQS 108 (1196)
Q Consensus 97 e~l~~~~~~~~~ 108 (1196)
|++.+++.....
T Consensus 134 e~l~~~~~~~~~ 145 (152)
T 2dax_A 134 EHASGYVSRDTS 145 (152)
T ss_dssp HHHHHHCCCCCC
T ss_pred HHHHHHHhcccc
Confidence 999999876644
No 301
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=99.01 E-value=7.3e-10 Score=131.04 Aligned_cols=143 Identities=10% Similarity=0.100 Sum_probs=116.1
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++...++||++|.||.| +. .++.+.+.++||++.+. ++.++|+|...+|++
T Consensus 197 Gsgf~~~~p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v~~~-~~~~~L~PTaE~~l~ 275 (484)
T 3lss_A 197 GGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGD-GDKKYLIATSEMPIA 275 (484)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEEESS-SSCEEECSSTHHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEeecC-CcceEEeccCcHHHH
Confidence 456788899999999999999999999999999999999 22 34456678899999775 788999998888998
Q ss_pred HHHHh----CCCCceeEEEecCeeecCCCC-C-------CCcceeEeEEEEeCCCCc--cch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAIS----NQKSSFKRYEISSVYRRAIGH-S-------PPNRYLQGDFDIIGGASA--LTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~VfR~e~~~-~-------~~~ef~Q~GvEiiG~~~~--~aD--aEvI~la~~~L~~lgi 878 (1196)
-++.. +..+|+|+|.+|++||+|... + |.++|+|.++.+|+.+.. ..+ .+++.++.++|+.||+
T Consensus 276 ~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~~~e~il~~LGL 355 (484)
T 3lss_A 276 AYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGL 355 (484)
T ss_dssp HHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77654 245699999999999998732 2 444699999999998765 333 3789999999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |++..
T Consensus 356 p--yrvv~ 361 (484)
T 3lss_A 356 P--YRVVN 361 (484)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
No 302
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.97 E-value=1.4e-09 Score=120.02 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=106.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~ 456 (1196)
..+..|++...++.|+.+.||++... +..+++|+....... ....+.+|+.+|+.+. |.++.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 34578999999999999999998754 789999998642111 1235888999999984 6677778766521
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+||||++| +|.+.+. +......++.+++.+|+.|
T Consensus 82 -----------------------------------~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~L 121 (263)
T 3tm0_A 82 -----------------------------------DGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLF 121 (263)
T ss_dssp -----------------------------------TTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHH
Confidence 3457999999988 7766531 1223347788999999999
Q ss_pred Hh-----------------------------------------------------------CCCcccCCCcCcEEecCCC
Q 000993 536 HG-----------------------------------------------------------QGIIHRDLTPNNIFFDARN 556 (1196)
Q Consensus 536 Hs-----------------------------------------------------------~gIiHrDLKp~NILld~~~ 556 (1196)
|+ ..++|+|++|.|||++.+.
T Consensus 122 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~ 201 (263)
T 3tm0_A 122 HSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK 201 (263)
T ss_dssp HHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE
T ss_pred hCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc
Confidence 98 3489999999999998765
Q ss_pred CeEEeccCcch
Q 000993 557 DIKIGDFGLAK 567 (1196)
Q Consensus 557 ~vKL~DFGlA~ 567 (1196)
.+.|+||+.+.
T Consensus 202 ~~~lIDwe~a~ 212 (263)
T 3tm0_A 202 VSGFIDLGRSG 212 (263)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEEchhcc
Confidence 56799999875
No 303
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=98.95 E-value=1.8e-09 Score=127.62 Aligned_cols=143 Identities=10% Similarity=0.086 Sum_probs=116.1
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++...++||++|.||.| +. .++.+.+.++||++.|. ++.++|+|-+.+|++
T Consensus 174 Gsg~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v~~~-~~~~~LipTaE~pl~ 252 (485)
T 3qne_A 174 GHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG-EDEKYLIATSEQPIS 252 (485)
T ss_dssp CTTCCEECTHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEEEET-TEEEEECSSTHHHHH
T ss_pred cceeEEEecHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEEeCC-CCeEEEeccccHHHH
Confidence 458889999999999999999999999999999999999 22 23456678899999875 678999999999999
Q ss_pred HHHHhC------CCCceeEEEecCeeecCCCC--------CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAISN------QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~~------~~~P~r~~Y~G~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi 878 (1196)
.++... ..+|+|++.+++|||+|... -|.++|+|.++.+|+.+....+ .+++.++.++|+.||+
T Consensus 253 ~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe~s~~e~e~ml~~~e~il~~LgL 332 (485)
T 3qne_A 253 AYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGL 332 (485)
T ss_dssp HHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 887652 23599999999999998743 2444699999999987654222 4889999999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |.+..
T Consensus 333 p--yrvv~ 338 (485)
T 3qne_A 333 P--YRVVG 338 (485)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
No 304
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=98.88 E-value=5.2e-09 Score=126.21 Aligned_cols=141 Identities=9% Similarity=0.085 Sum_probs=114.4
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.+ .-.++.+.+.++||++.| +.++|+|.-.++++
T Consensus 264 G~g~~~~~p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~---~~~~L~PT~E~~~~ 340 (536)
T 3err_A 264 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 340 (536)
T ss_dssp CSSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT---TTEEECSSTHHHHH
T ss_pred CCceeEEcCHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEecC---CCEEEccCCcHHHH
Confidence 468889999999999999999999999999999999999 223456677899999875 68999998778888
Q ss_pred HHHHh----CCCCceeEEEecCeeecCCCC--------CCCcceeEeEEEEeCCCC--ccch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGAS--ALTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~--~~aD--aEvI~la~~~L~~lgi 878 (1196)
-++.. ++..|+|++.+|++||+|... -|.++|+|.+..+|+.++ ...+ .+++.++.++|+.||+
T Consensus 341 ~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~~~i~~~LgL 420 (536)
T 3err_A 341 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 420 (536)
T ss_dssp HHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 76654 234699999999999998732 144469999999999887 3222 3788899999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |++..
T Consensus 421 p--yrvv~ 426 (536)
T 3err_A 421 P--YRLVE 426 (536)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
No 305
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=98.88 E-value=1.2e-09 Score=111.06 Aligned_cols=84 Identities=11% Similarity=0.009 Sum_probs=71.7
Q ss_pred ceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHh-hhCCCeEEEeeHHHHH
Q 000993 18 AQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQ 96 (1196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~Gm~miftl~~~~~ 96 (1196)
.|+|.++.++. ...+.|+|+||++||+++|.+.|... +++..+...|.+.|.+.+++| + ||+|||++|+.+|
T Consensus 63 ~~~i~l~~~~~----~~~i~L~v~lP~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~~l--G~~mif~lve~lq 135 (154)
T 2daw_A 63 EFVITLQIEEP----KVKIDLQVTMPHSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQ 135 (154)
T ss_dssp EEEEEEEETTT----TEEEEEEEEECSSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHH
T ss_pred EEEEEEecCCC----CceEEEEEEcCCCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHH
Confidence 56655544321 24899999999999999999999986 899999999999999999887 8 9999999999999
Q ss_pred HHHHhhCCCCcc
Q 000993 97 EFLSEIVPLGQS 108 (1196)
Q Consensus 97 e~l~~~~~~~~~ 108 (1196)
|++++++....+
T Consensus 136 e~~~~~l~~~~~ 147 (154)
T 2daw_A 136 DNSASYFLNRKL 147 (154)
T ss_dssp HTTHHHHCCCCC
T ss_pred HHHHHHHhCcCC
Confidence 999999887655
No 306
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.83 E-value=8.1e-09 Score=112.97 Aligned_cols=135 Identities=16% Similarity=0.064 Sum_probs=94.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC--eeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH--VVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn--IV~l~~~~~e~~~~~ 456 (1196)
++.++.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++...
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----- 86 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTE----- 86 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----
T ss_pred hcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----
Confidence 445666655445666799999865 46788999987532 1235778999999885544 4446654311
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+||||++| +|. .. ..+ ...++.+++..|+.|
T Consensus 87 -----------------------------------~~~~~~v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~l 123 (264)
T 1nd4_A 87 -----------------------------------AGRDWLLLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRL 123 (264)
T ss_dssp -----------------------------------SSCEEEEEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCEEEEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHH
Confidence 2346899999987 553 21 122 225677888888888
Q ss_pred HhCC----------------------------------------------------------CcccCCCcCcEEecCCCC
Q 000993 536 HGQG----------------------------------------------------------IIHRDLTPNNIFFDARND 557 (1196)
Q Consensus 536 Hs~g----------------------------------------------------------IiHrDLKp~NILld~~~~ 557 (1196)
|+.. ++|+|++|.|||++.++.
T Consensus 124 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~ 203 (264)
T 1nd4_A 124 HTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRF 203 (264)
T ss_dssp TTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEE
T ss_pred hCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcE
Confidence 8753 999999999999987766
Q ss_pred eEEeccCcch
Q 000993 558 IKIGDFGLAK 567 (1196)
Q Consensus 558 vKL~DFGlA~ 567 (1196)
+.|+|||.+.
T Consensus 204 ~~liD~~~a~ 213 (264)
T 1nd4_A 204 SGFIDCGRLG 213 (264)
T ss_dssp EEECCCTTCE
T ss_pred EEEEcchhcc
Confidence 7799999875
No 307
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=98.71 E-value=3.5e-08 Score=116.65 Aligned_cols=114 Identities=11% Similarity=0.050 Sum_probs=91.5
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.....+..+.+.++++|.++||.+|+||++..... +-..+||.+ +..|+.+.|| |+++... ++. .+.|+
T Consensus 133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~~~--e~~~~~f~~-~~~~~~~~Lr~Spel~~~~--~~~----g~~rv 203 (434)
T 1x54_A 133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAV--EGGATLFKL-KYFDKYAYLSQSAQLYLEA--AIF----GLEKV 203 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCS--SCGGGCCEE-EETTEEEEECSCSHHHHHH--HHH----HHSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEeecC--CCCceeEEE-eecCCcEEeccChHHHHHH--Hhc----Cccce
Confidence 34778889999999999999999999999853322 224578877 5678999999 8777543 222 37899
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.+ +.|++.++.+.++.+
T Consensus 204 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 250 (434)
T 1x54_A 204 WSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD----LWDIMKVEEELVSYM 250 (434)
T ss_dssp EEEEEEECCCCCCCSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEecceecCCCCCcccccEEEEeeEEEcCCC----HHHHHHHHHHHHHHH
Confidence 999999999988764 44 8999999999974 789999998888775
No 308
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.70 E-value=2.8e-08 Score=115.00 Aligned_cols=142 Identities=17% Similarity=0.273 Sum_probs=100.5
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEe--cCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCccccCCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~--~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.++.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..+++++..+.+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~------- 111 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES------- 111 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-------
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-------
Confidence 3678999999999998764 5688899765 2211 122346888999999996 455777776652210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-- 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-- 537 (1196)
.....|+||||++| .+.+. ....++..+...++.+++..|+.||+
T Consensus 112 ------------------------------~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 112 ------------------------------VIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp ------------------------------TTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ------------------------------ccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 01235899999987 44321 12346788888999999999999997
Q ss_pred --------------------------------------------------------CCCcccCCCcCcEEecCCCC--eE
Q 000993 538 --------------------------------------------------------QGIIHRDLTPNNIFFDARND--IK 559 (1196)
Q Consensus 538 --------------------------------------------------------~gIiHrDLKp~NILld~~~~--vK 559 (1196)
..++|+|++|.|||++.++. +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~ 239 (359)
T 3dxp_A 160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA 239 (359)
T ss_dssp TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence 35899999999999997753 68
Q ss_pred EeccCcchh
Q 000993 560 IGDFGLAKF 568 (1196)
Q Consensus 560 L~DFGlA~~ 568 (1196)
|.||+.+..
T Consensus 240 viDwe~a~~ 248 (359)
T 3dxp_A 240 VLDWELSTL 248 (359)
T ss_dssp ECCCTTCEE
T ss_pred EECcccccc
Confidence 999999864
No 309
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=98.66 E-value=6.5e-08 Score=114.10 Aligned_cols=114 Identities=9% Similarity=0.083 Sum_probs=90.4
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-...+..+.+.+++.|..+||.+|+||++..... +-..++|.+ +..|+.+.|| |+++ ..| ++. .+.|+
T Consensus 132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~~~--e~~~~~f~~-~~~~~~~~L~~Spql~--~~~-~~~---g~~rv 202 (429)
T 1wyd_A 132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIASAT--EGGAQLFPV-IYFGKEAFLAQSPQLY--KEL-MAG---VVERV 202 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--STTCCCCEE-EETTEEEEECSCCHHH--HHH-HHH---HHSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEeeCC--CCCceeEEE-ecCCceEEecCCcHHH--HHH-HHh---CcCce
Confidence 34678889999999999999999999999853322 224578877 5678999999 7766 334 333 27799
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.+ ..|++.++.+.++.+
T Consensus 203 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 249 (429)
T 1wyd_A 203 FEVAPAWRAEESDTPFHLAEFISMDVEMAFAD----YNDVMQLLEKILHNI 249 (429)
T ss_dssp EEEEEEECCCCCCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccccCCccccccceeeEeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 999999999998764 44 8999999999974 688999888888764
No 310
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=98.60 E-value=3.4e-08 Score=116.21 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=64.8
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-...+..+.+.+++.|.++||.+|+||++..... +-..+||.+ +..|+.+.|| |+++. +.++ .. ..|+
T Consensus 123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~~~--e~~~~~f~~-~~~g~~~~L~~Spel~~---~~l~-~g--~~rv 193 (422)
T 1n9w_A 123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQLYK---QIMV-GV--FERV 193 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHHHH---HHHH-HH--HSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEeCC--CCCceeEEE-eeCCCcEEeeeCHHHHH---HHHh-hC--CCce
Confidence 34678899999999999999999999999853322 223467877 5668889999 88774 3333 22 5699
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.++ ..|++.++.+.++.+
T Consensus 194 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~d---~~dlm~l~e~ll~~l 241 (422)
T 1n9w_A 194 YEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIAD---EEDLMRLEEALLAEM 241 (422)
T ss_dssp EEEEEC-------------CCEEEEEEEESCSS---HHHHHHHHHHHHHHH
T ss_pred eEEeCceECCCCCCCcccceeEEeeeeeeCCCC---HHHHHHHHHHHHHHH
Confidence 999999999998764 44 89999999999744 678999988888764
No 311
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=98.49 E-value=2.7e-07 Score=103.77 Aligned_cols=145 Identities=13% Similarity=0.124 Sum_probs=116.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecC--------------
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHG-------------- 799 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~-------------- 799 (1196)
...|+.-+.+.-+.+.+.+++.+++ ...+||++|.||.+ .+. ++...+.++||....-.
T Consensus 52 g~~g~y~~~g~~a~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ll~~~~ 130 (346)
T 3mf2_A 52 GSDGVYARTALYESIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFD 130 (346)
T ss_dssp EETTEEEEEHHHHHHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCceEEecchHHHHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhhhhhhhc
Confidence 3467888889999999999999999 88999999999999 322 33566788999864422
Q ss_pred ----------CceEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCCCCC--CCcceeEeEEEEeCCCCccch--
Q 000993 800 ----------GDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHS--PPNRYLQGDFDIIGGASALTE-- 862 (1196)
Q Consensus 800 ----------G~~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~~~~--~~~ef~Q~GvEiiG~~~~~aD-- 862 (1196)
+..++|.|-..+|+.-++... ...|+|+.-.|+|||+|...+ |.++|+|..+.+||.++...+
T Consensus 131 ~~~~~~~~l~~~d~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~EaS~GL~RvhqF~kvE~v~~~tpEqs~~e~ 210 (346)
T 3mf2_A 131 AGGDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFR 210 (346)
T ss_dssp TTSCGGGGEEEEEEEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHH
T ss_pred cccccccccCCCCEEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcCCCCCeeeeeeEEEEEEEEeCHHHHHHHH
Confidence 357999999999999988742 245999999999999987433 334599999999998765433
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 863 AEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 863 aEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
.+++.++.++|+.||+. |++.+.
T Consensus 211 e~l~~~ae~il~~LgLp--yrv~~~ 233 (346)
T 3mf2_A 211 ERWMVRAQAIARDLGLT--FRVDYA 233 (346)
T ss_dssp HHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred HHHHHHHHHHHHHCCCC--EEEEEc
Confidence 38899999999999995 777765
No 312
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=98.43 E-value=7.2e-07 Score=106.88 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=86.5
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-.+++..|.+.+++.|..+||.+|+||++.-...++ ..++|.+. ..|+.+.|| |++-. -++++ ..+-|+
T Consensus 176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~~~~--ga~~f~~~-~~~~~~~L~~Spql~~--k~l~~---~g~~rv 247 (487)
T 1eov_A 176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVT-YFKGKAYLAQSPQFNK--QQLIV---ADFERV 247 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEE-ETTEEEEECSCTHHHH--HHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEecCCC--Ccccceec-cCCccEEcccChHHHH--HHHHh---cCCCce
Confidence 3467888999999999999999999999985432221 23578764 468999999 87743 23333 246799
Q ss_pred EEecCeeecCCCCCCC-c-ceeEeEEEE-eCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPP-N-RYLQGDFDI-IGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~-~-ef~Q~GvEi-iG~~~~~aDaEvI~la~~~L~~l 876 (1196)
||+|+|||+|.++.+| + ||+|+++|+ ||.+. .|++.++.+.++.+
T Consensus 248 y~ig~~FR~E~~~~~Rh~pEFt~le~e~af~~~~----~dlm~l~E~ll~~l 295 (487)
T 1eov_A 248 YEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHY----HEVLDTLSELFVFI 295 (487)
T ss_dssp EEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCT----HHHHHHHHHHHHHH
T ss_pred EEEeccEecCCCCCCccchhhhhhhhhhhhhcCH----HHHHHHHHHHHHHH
Confidence 9999999999987544 4 899999998 77533 56777777777653
No 313
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.24 E-value=6.9e-07 Score=100.84 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=92.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCe--eeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHV--VRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnI--V~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.++.|.+..||++. ..+++|+... ......+.+|+.+|+.+. +..+ .+++......
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----------- 85 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----------- 85 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-----------
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-----------
Confidence 458999999999763 4688997542 234567889999999884 3332 2332211000
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-----
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG----- 537 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs----- 537 (1196)
......|+||++++| .+..... ..++.++...++.+++..|+.||+
T Consensus 86 --------------------------~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~ 137 (304)
T 3sg8_A 86 --------------------------ETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISG 137 (304)
T ss_dssp --------------------------SSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred --------------------------CCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 001123789999987 5544222 346777778888888888888886
Q ss_pred -----------------------------------------------------CCCcccCCCcCcEEecC--CCCeEEec
Q 000993 538 -----------------------------------------------------QGIIHRDLTPNNIFFDA--RNDIKIGD 562 (1196)
Q Consensus 538 -----------------------------------------------------~gIiHrDLKp~NILld~--~~~vKL~D 562 (1196)
..++|+|++|.||+++. ...+.|+|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD 217 (304)
T 3sg8_A 138 FKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIID 217 (304)
T ss_dssp SCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECC
T ss_pred CCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEe
Confidence 13699999999999998 45678999
Q ss_pred cCcchh
Q 000993 563 FGLAKF 568 (1196)
Q Consensus 563 FGlA~~ 568 (1196)
|+.+..
T Consensus 218 ~~~~~~ 223 (304)
T 3sg8_A 218 FGDAAI 223 (304)
T ss_dssp CTTCEE
T ss_pred CCCCcc
Confidence 999864
No 314
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.19 E-value=7.2e-06 Score=93.29 Aligned_cols=130 Identities=21% Similarity=0.270 Sum_probs=93.5
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC---C-CeeeeeeeeeecCccccCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH---Q-HVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H---p-nIV~l~~~~~e~~~~~~~~ 459 (1196)
..++.++.|....||++ |..+++|+.. .......+.+|..+|+.+.+ + .+.++++.
T Consensus 40 ~~v~~l~~G~~n~vy~v-----g~~~vlR~~~----~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----------- 99 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC-----NEQYVVKVPK----RDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----------- 99 (320)
T ss_dssp SCEEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----------
T ss_pred EEEEeCCCCCCceEEEE-----CCEEEEEeCC----cHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec-----------
Confidence 34678999999999987 6678899753 22234568899999999866 1 12333321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...|++|||++| ++.... ...++..+...++.+++..|+.||+.
T Consensus 100 ---------------------------------~~~~lvme~i~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~ 144 (320)
T 3r70_A 100 ---------------------------------SDRFNIMKYIKGERITYEQ--YHKLSEKEKDALAYDEATFLKELHSI 144 (320)
T ss_dssp ---------------------------------CSSCEEEECCCCBCCCHHH--HTTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------CCcEEEEeecCCccccccc--cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 112799999987 554322 23466777777888888888888843
Q ss_pred C---------------------------------------------------------------CcccCCCcCcEEecCC
Q 000993 539 G---------------------------------------------------------------IIHRDLTPNNIFFDAR 555 (1196)
Q Consensus 539 g---------------------------------------------------------------IiHrDLKp~NILld~~ 555 (1196)
. ++|+|++|.|||++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~ 224 (320)
T 3r70_A 145 EIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN 224 (320)
T ss_dssp CCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT
T ss_pred CcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC
Confidence 2 3899999999999986
Q ss_pred CCeEEeccCcchh
Q 000993 556 NDIKIGDFGLAKF 568 (1196)
Q Consensus 556 ~~vKL~DFGlA~~ 568 (1196)
..+.|+||+.+..
T Consensus 225 ~~~~~iD~~~~~~ 237 (320)
T 3r70_A 225 RLFGVIDFGDFNV 237 (320)
T ss_dssp EEEEECCCTTCEE
T ss_pred ceEEEECCccccc
Confidence 6679999999864
No 315
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=98.18 E-value=8.1e-06 Score=97.78 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=85.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
..+++..|...+++.|..+||.+|+||++.-...|. ..++|.+. +..|+.+.|| ..+++. |.++ ...-|+
T Consensus 173 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~Ga--~a~~F~~~~~~~~~~~yLr--~SpqLylk~l~v---~G~~rV 245 (493)
T 3a74_A 173 TFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGA--AARPFITHHNALDMTLYMR--IAIELHLKRLIV---GGLEKV 245 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEEC--SCSHHHHHHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEECCeEEecCCCC--cccceEecccCCCceeEEe--cCHHHHHHHHhh---cccCce
Confidence 467888999999999999999999999985332232 34677765 6678999999 233332 3333 245699
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++.+.++.+
T Consensus 246 yeig~~FR~E~~~~rH~pEFT~lE~e~af~d----~~dlm~l~E~ll~~l 291 (493)
T 3a74_A 246 YEIGRVFRNEGISTRHNPEFTMLELYEAYAD----FRDIMKLTENLIAHI 291 (493)
T ss_dssp EEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEECccccCCCCCcccCCceeEEEEEecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988776554 7999999999864 556777766666554
No 316
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=97.89 E-value=5.2e-05 Score=90.94 Aligned_cols=115 Identities=9% Similarity=0.060 Sum_probs=82.1
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
-.+++..|...+++.|..+||-+|+||++.-...|. ..++|.+. +..|+.+.||- .+++. |.++. ..-|+
T Consensus 182 ~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~~~Ga--~ar~F~t~~~~~~~~~yL~~--SpqLylk~L~v~---G~~rV 254 (504)
T 1e1o_A 182 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGA--SARPFITHHNALDLDMYLRI--APELYLKRLVVG---GFERV 254 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCSS--CCCCCEEEETTTTEEEEECS--CSHHHHHHHHHH---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCeEEecCCCC--cccceEeccCCCCceEEecc--CHHHHHHHHhhc---CCCcE
Confidence 367888999999999999999999999985322232 23566554 45688999993 23332 43432 34599
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++-+.++.+
T Consensus 255 yeIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~dlm~l~E~li~~~ 300 (504)
T 1e1o_A 255 FEINRNFRNEGISVRHNPEFTMMELYMAYAD----YHDLIELTESLFRTL 300 (504)
T ss_dssp EEEEEEECCCCCCC-CCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCccccCceeeeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988766554 7999999999864 445666666555543
No 317
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.88 E-value=0.00011 Score=83.12 Aligned_cols=133 Identities=18% Similarity=0.209 Sum_probs=87.2
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC---CeeeeeeeeeecCccccCCCCc
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp---nIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
++.++.|....||+. |..+++|+-. .......+.+|+.+|+.+.+. .+.+++.+...
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----------- 83 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----------- 83 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-----------
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-----------
Confidence 456889999999987 5678889742 223456789999999999653 23344332210
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~--- 538 (1196)
.....|++|+|++| .+.... ...++..+...++.+++..|+.||+.
T Consensus 84 ----------------------------~~g~~~~v~e~i~G~~l~~~~--~~~l~~~~~~~~~~~lg~~La~LH~~~~~ 133 (306)
T 3tdw_A 84 ----------------------------SDGNPFVGYRKVQGQILGEDG--MAVLPDDAKDRLALQLAEFMNELSAFPVE 133 (306)
T ss_dssp ----------------------------TTSCEEEEEECCCSEECHHHH--HTTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred ----------------------------CCCceEEEEeccCCeECchhh--hhhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 12235799999987 554421 11234444455555555555555532
Q ss_pred ---------------------------------------------------------CCcccCCCcCcEEecC---CCC-
Q 000993 539 ---------------------------------------------------------GIIHRDLTPNNIFFDA---RND- 557 (1196)
Q Consensus 539 ---------------------------------------------------------gIiHrDLKp~NILld~---~~~- 557 (1196)
.++|+|++|.|||++. ++.
T Consensus 134 ~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~ 213 (306)
T 3tdw_A 134 TAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPL 213 (306)
T ss_dssp HHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCE
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCce
Confidence 3599999999999987 455
Q ss_pred eEEeccCcchh
Q 000993 558 IKIGDFGLAKF 568 (1196)
Q Consensus 558 vKL~DFGlA~~ 568 (1196)
+.|+||+.+..
T Consensus 214 ~~~iD~~~a~~ 224 (306)
T 3tdw_A 214 TGIIDFGDAAI 224 (306)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEehhhcCC
Confidence 48999998864
No 318
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=97.88 E-value=0.00011 Score=84.16 Aligned_cols=121 Identities=15% Similarity=0.089 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC-Ccc-----cccceEEEeecCC-----------ceEeecCCCcHH
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD-CPQ-----FKRNTVKLLTHGG-----------DLLELSHELRLP 812 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~-~~~-----~~~~my~f~D~~G-----------~~laLRPD~T~~ 812 (1196)
...+.+.++++|...||.++.+|.+.- ... ... .....|.+..+.. +..+||+-+++.
T Consensus 103 ~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~~nfd~L~~p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt~tsp~ 182 (350)
T 1b7y_A 103 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPM 182 (350)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTTTTTCCSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECSSSTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECcchhcchhHHHhhCCCCCCccccccccEEEcCccccccccccccccccceeeccchHH
Confidence 457888999999999999999998811 111 111 0133455655443 678999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeeecCC-CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc-CC
Q 000993 813 FIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 878 (1196)
Q Consensus 813 iaR~~a~~~~~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l-gi 878 (1196)
.+|.++. +..|+|+|.+|+|||++. ......+|+|+..=++|..-.. ..+..++..+++.+ |.
T Consensus 183 llr~l~~-~~~piriFEiGrVFR~d~~d~tH~pEF~qlegl~~g~~v~f--~dLKg~le~ll~~lfG~ 247 (350)
T 1b7y_A 183 QVRYMVA-HTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAM--AHLKGAIYELAQALFGP 247 (350)
T ss_dssp HHHHHHH-CCSSEEEEEEEEEECCCCCCSSCCSEEEEEEEEEEETTCCH--HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHh-cCCCeeEEEeeeEEECCCCCCCCCChhHEEEEEEECCCCCH--HHHHHHHHHHHHhhcCC
Confidence 9999876 466999999999999854 3334458999999999863222 23445555556655 54
No 319
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.85 E-value=8.4e-05 Score=81.80 Aligned_cols=131 Identities=18% Similarity=0.178 Sum_probs=89.2
Q ss_pred eeccCCcE-EEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFG-HVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG-~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.+..|..| .||+......+..+++|+-.. .....+.+|...|+.+. +--+.++++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~--------------- 90 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIR--------------- 90 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE---------------
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEE---------------
Confidence 45556665 699888777788899998652 23457889999999884 223455554442
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC------
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ------ 538 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~------ 538 (1196)
+....|+|||+++| ++.+..... ......+..+++..|+-||+.
T Consensus 91 -------------------------~~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~ 141 (272)
T 4gkh_A 91 -------------------------TPDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCP 141 (272)
T ss_dssp -------------------------ETTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCC
T ss_pred -------------------------ECCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 12456899999987 665544321 122234555666666666631
Q ss_pred ----------------------------------------------------CCcccCCCcCcEEecCCCCeEEeccCcc
Q 000993 539 ----------------------------------------------------GIIHRDLTPNNIFFDARNDIKIGDFGLA 566 (1196)
Q Consensus 539 ----------------------------------------------------gIiHrDLKp~NILld~~~~vKL~DFGlA 566 (1196)
.++|+|+.|.|||++.++.+-|+||+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a 221 (272)
T 4gkh_A 142 FNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221 (272)
T ss_dssp BBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred cCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence 2689999999999998777779999988
Q ss_pred h
Q 000993 567 K 567 (1196)
Q Consensus 567 ~ 567 (1196)
.
T Consensus 222 ~ 222 (272)
T 4gkh_A 222 G 222 (272)
T ss_dssp E
T ss_pred c
Confidence 5
No 320
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=97.80 E-value=9.2e-05 Score=88.03 Aligned_cols=129 Identities=12% Similarity=0.026 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHcCCccccc-cce-----eecC--C-Ccccccc---eEEEeec-----------------------
Q 000993 754 LRDYVVQVTKEMFRQHCAKHLEI-EPM-----YLLG--D-CPQFKRN---TVKLLTH----------------------- 798 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~~~Gy~~I~t-P~~-----~~~~--~-~~~~~~~---my~f~D~----------------------- 798 (1196)
-...+.+.++++|...||.++.| |.+ .|.. . .+...+. .|.+.++
T Consensus 226 Pl~~v~~~Ir~if~~mGF~Ev~t~~~ves~~~NFDaLn~P~dHPaR~~~Dtfyi~~P~~~~~~~e~~~~~v~~~He~g~~ 305 (508)
T 3l4g_A 226 PLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGY 305 (508)
T ss_dssp HHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHHTCBT
T ss_pred HHHHHHHHHHHHHHHCcCeEeccCCccccHHHHHHhcCCCCCCcccccCceEEEcCccccccccHHHHHhhhhhhhcccc
Confidence 35688899999999999999876 555 1111 1 1111222 2444432
Q ss_pred ------------CCceEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCCC-CCCcceeEeEEEEeCCCCccc
Q 000993 799 ------------GGDLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALT 861 (1196)
Q Consensus 799 ------------~G~~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~a 861 (1196)
.++..+||+.+|+..+|+++.| ...|+|+|++|+|||++... ....+|+|++.-++|.. ..
T Consensus 306 ~s~g~~~~~~~~~~~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~DatHlpeFhQlegl~~~~~--v~ 383 (508)
T 3l4g_A 306 GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHG--LT 383 (508)
T ss_dssp TBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSSSCSEEEEEEEEEEEES--CC
T ss_pred CCccccccccccccccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCCcCCeEEEEEEEEECCC--CC
Confidence 1257899999999999999863 34699999999999997644 44457999999887632 34
Q ss_pred hHHHHHHHHHHHHHcCCCCceEEE
Q 000993 862 EAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 862 DaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
-.++..++..+++.+|+.. +++.
T Consensus 384 f~dLKg~Le~~l~~lG~~~-~rfr 406 (508)
T 3l4g_A 384 LGHLMGVLREFFTKLGITQ-LRFK 406 (508)
T ss_dssp HHHHHHHHHHHHHTTTCCC-CEEE
T ss_pred HHHHHHHHHHHHHHcCCcc-eEee
Confidence 4567777888888887653 4443
No 321
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=6.9e-05 Score=87.67 Aligned_cols=53 Identities=25% Similarity=0.200 Sum_probs=34.8
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC----C-chhHHHHHHHHHHHHhcC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK----S-LPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~----~-~~~~~~~~~Ev~iL~~L~ 438 (1196)
.+.||.|.++.||++....+++.++||....... . .....++..|..+|+.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~ 92 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQG 92 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHH
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhh
Confidence 5689999999999997765678999998653211 0 012345678999998874
No 322
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=97.72 E-value=0.00017 Score=82.52 Aligned_cols=120 Identities=9% Similarity=0.009 Sum_probs=79.9
Q ss_pred hhhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe--e---cCCceEeecCCCcHHHHHHHHhCCCC
Q 000993 749 DLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL--T---HGGDLLELSHELRLPFIRWAISNQKS 823 (1196)
Q Consensus 749 p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~--D---~~G~~laLRPD~T~~iaR~~a~~~~~ 823 (1196)
-...+++..|...+++.|...||-+|+||++.-... ++...+.|++. + ..++.+-||---=.-.-|.++..
T Consensus 33 ~~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-~~a~~~~F~~~~~~~~~~~~~~~yL~~Spql~~k~l~~~g--- 108 (345)
T 3a5y_A 33 IPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATV-TDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAG--- 108 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCC-CCTTCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecCC-CCCccceEEEEecCcccccCCCEeecCCHHHHHHHHHHcC---
Confidence 346788999999999999999999999999843222 21233445432 1 11245557632222233455532
Q ss_pred ceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 824 SFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
--|+|++|+|||+|....++. ||+|+++|..+.+ -.+++.++-+.++.+
T Consensus 109 ~~rvyqIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~d~m~~~E~li~~v 158 (345)
T 3a5y_A 109 CGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD----MYRLMNEVDDLLQQV 158 (345)
T ss_dssp CCSEEEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcceeCCCCcccccchhheeeeeeeCCC----HHHHHHHHHHHHHHH
Confidence 249999999999988744443 7999999999863 345677776666664
No 323
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.64 E-value=0.00022 Score=79.99 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=45.3
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC---Ceeeeee
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQ 447 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp---nIV~l~~ 447 (1196)
...+.||.|.++.||++... +|+.++||+..... ......+.+|+..|+.+.+. .++++++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~ 81 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAG 81 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEE
Confidence 34678999999999999764 78899999864322 11234688999999999875 4566653
No 324
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=97.61 E-value=7.3e-05 Score=89.28 Aligned_cols=76 Identities=13% Similarity=0.185 Sum_probs=58.8
Q ss_pred eEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCCC-CC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIG-HS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~~-~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+...+..| +..|+|+|++|+|||++.+ +. +..+|+|+++.+.|..... .++..++..+|+.|
T Consensus 180 ~svLRTsLlPgLL~~lr~N~~r~~~pvrLFEIG~VFr~d~~~d~th~~Ef~qLagli~G~~vdf--~dLKgilE~LL~~L 257 (534)
T 2du3_A 180 TLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSV--DDGKAVAEALLRQF 257 (534)
T ss_dssp EEEECSSHHHHHHHHHHTTTTTSCSSEEEEEEEEEECCCTTCSSSCCSEEEEEEEEEECSSCCH--HHHHHHHHHHHGGG
T ss_pred ccccCccchhhHHHHHHHHHhCCCCCeeEEEEeeEEecCccccccccceeeEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 4799999999666555543 3569999999999998654 43 4568999999999974322 56888888888888
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 258 Gi~ 260 (534)
T 2du3_A 258 GFE 260 (534)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
No 325
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.60 E-value=0.00022 Score=82.59 Aligned_cols=55 Identities=13% Similarity=0.212 Sum_probs=39.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC--eeeeee
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH--VVRYYQ 447 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn--IV~l~~ 447 (1196)
..++.|+.|....+|+... +|..+++|+... . ..+.+|+.+|+.+.... +.+++.
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~---~----~~~~~E~~~l~~L~~~gvpvP~vl~ 100 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSC---A----DGFYKDRYVYRHFASAALPIPEVLD 100 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESC---C----HHHHHHHHHHHHHCCSSSCCCCEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCc---h----hhHHHHHHHHHHHHhcCCCCceEEE
Confidence 3467899999999998875 588999997642 1 25888999999886533 344443
No 326
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=97.49 E-value=0.00039 Score=82.03 Aligned_cols=116 Identities=12% Similarity=0.066 Sum_probs=79.8
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEe
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 830 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~ 830 (1196)
-.+++..+...+++.|...||-+|+||++.-... +-..++|.+. .-|+.+.||..--.-.-|.++. .--|+|++
T Consensus 136 ~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~~--eg~~~~f~~~-~~~~~~yL~~Spql~~q~l~~~---g~~rvf~i 209 (438)
T 3nem_A 136 IFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT--EGGTELFPMK-YFEEDAFLAQSPQLYKQIMMAS---GLDRVYEI 209 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SCSSSCCEEE-ETTEEEEECSCSHHHHHHGGGT---TCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCCC--CCCccceeEe-eCCccEEEecChHHHHHHHHhc---CCCceEEE
Confidence 4677889999999999999999999999844322 1122356553 3477889985333333344332 34599999
Q ss_pred cCeeecCCCCCCCc--ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 831 SSVYRRAIGHSPPN--RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 831 G~VfR~e~~~~~~~--ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
|++||+|..+.+|. ||+|+++|..+.++.. +++.++-+.++.
T Consensus 210 ~~~FR~E~~~t~RH~pEFt~le~e~a~~~~~~---d~m~~~E~li~~ 253 (438)
T 3nem_A 210 APIFRAEEHNTTRHLNEAWSIDSEMAFIEDEE---EVMSFLERLVAH 253 (438)
T ss_dssp EEEECCCSSCCTTCCSEEEEEEEEEESCSSHH---HHHHHHHHHHHH
T ss_pred cceEECCCCCCcccccceeeeeeeeccCccHH---HHHHHHHHHHHH
Confidence 99999998765433 8999999999876432 355555554443
No 327
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=97.45 E-value=0.00051 Score=81.24 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=80.1
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCcee
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFK 826 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r 826 (1196)
...+++..|...+++.|...||-+|+||+++-... |. .++|.+ +.-|+.+.|| |++-.. +.++ .--|
T Consensus 130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~eG~---~~~F~~-~~~g~~~~L~~SpqLylq--~l~~----g~~r 199 (435)
T 2xgt_A 130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGG---STLFNL-DYFGEQSFLTQSSQLYLE--TCIP----TLGD 199 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSSCT---TSCCEE-EETTEEEEECSCSHHHHH--HHHH----HHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccCCCc---hhceee-ccCCcccccCCChHHHHH--Hhhh----ccCc
Confidence 34788899999999999999999999999843322 22 234543 4557888898 444333 2332 1349
Q ss_pred EEEecCeeecCCCCC-CCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 827 RYEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+|++|++||+|..+. +.. ||+|+++|..+.+ ..+++.++.+.++.
T Consensus 200 vfeIg~~FR~E~~~t~RH~~EFT~lE~e~af~d----~~d~m~~~E~li~~ 246 (435)
T 2xgt_A 200 VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFIT----LDDLMEKIEELVCD 246 (435)
T ss_dssp EEEEEEEECCCSSCCTTCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred eEEEecceecCCCCccccccceeEEEEEEecCC----HHHHHHHHHHHHHH
Confidence 999999999998765 444 8999999999864 34566666666654
No 328
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=97.27 E-value=0.0006 Score=81.37 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=57.0
Q ss_pred ceEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCC--CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 801 DLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAI--GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 801 ~~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~--~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+..+||+.+++.+...+..| +..|+|+|.+|+|||.+. ...+..+|+|+++-+.|.. ..-.++..++..+|+.
T Consensus 191 e~svLRTsLlPGLL~~vr~N~~r~~~pvrlFEiGrVFr~D~~~d~th~~ef~qLaglv~G~~--vdF~DLKG~Le~ll~~ 268 (549)
T 2du7_A 191 TTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGED--VSVDDGKVVAEGLLAQ 268 (549)
T ss_dssp EEEECCSTTHHHHHHHHHTTTTTSCSSEEEEEEEEECCCCSSCSSSCCSCEEEEEEEEECTT--CCHHHHHHHHHHHHGG
T ss_pred cccccccccchhHHHHHHHHHhcCCCCeEEEEEeeEEecCCcccCcCCCcceEEEEEEECCC--CCHHHHHHHHHHHHHH
Confidence 46789999999655555443 456999999999999754 2334568999999999963 3345677777888888
Q ss_pred cCC
Q 000993 876 FFH 878 (1196)
Q Consensus 876 lgi 878 (1196)
||+
T Consensus 269 LGi 271 (549)
T 2du7_A 269 FGF 271 (549)
T ss_dssp GTC
T ss_pred cCC
Confidence 886
No 329
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.27 E-value=0.0024 Score=67.68 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=90.5
Q ss_pred CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCC
Q 000993 505 TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582 (1196)
Q Consensus 505 sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 582 (1196)
+|.++|... .+++++++|.++.|.+.+|.-+ ++..-..+=+-|..|++..+|+|.+.+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence 799999865 5799999999999999998876 222212344457999999999988763 1110
Q ss_pred CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCC-CccccCCHH
Q 000993 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSE 661 (1196)
Q Consensus 583 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~ 661 (1196)
.....+.|||.... ..+.+.=|||||+++|.-+- ..++ ......++.
T Consensus 98 ------------~~~~~~~~pe~~~~--~~te~~~IysLG~tLY~ALD------------------ygL~e~eE~eLS~~ 145 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGYS--QCMETEVIESLGIIIYKALD------------------YGLKENEERELSPP 145 (229)
T ss_dssp ---------------------CCSSS--SSCHHHHHHHHHHHHHHHHT------------------TTCCTTEEECCCHH
T ss_pred ------------ccccCCCChhhccc--cchHHHHHHHHHHHHHHHhh------------------cCCCcccchhhCHH
Confidence 11224668887642 35788999999999999872 2222 344567789
Q ss_pred HHHHHHHcccC-------------------------CCCCCCCHHHHHh
Q 000993 662 QESLLRRLMSP-------------------------SPSDRPSATELLQ 685 (1196)
Q Consensus 662 l~~LI~~cL~~-------------------------dP~~RPta~eiL~ 685 (1196)
+.+||..|... .+..|+++.+|++
T Consensus 146 LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~ 194 (229)
T 2yle_A 146 LEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK 194 (229)
T ss_dssp HHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred HHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence 99999999866 2467888888876
No 330
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.22 E-value=0.0023 Score=72.45 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=27.5
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999875
No 331
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.17 E-value=0.00089 Score=76.84 Aligned_cols=66 Identities=6% Similarity=-0.033 Sum_probs=40.4
Q ss_pred eEEeee-ccCCcEEEEEEEEc--c----CCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-C--CCeeeeeeee
Q 000993 384 EELQPL-GHGGFGHVVLCKNK--L----DGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQAW 449 (1196)
Q Consensus 384 ~~~~~L-G~G~fG~Vy~a~~~--~----~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-H--pnIV~l~~~~ 449 (1196)
...+.| +.|....+|++... . ++..+++|+...... .......+.+|+.+|+.+. + -.+.+++..+
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~ 99 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIE 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence 345678 88999999988653 1 166889997543210 0000134678888888874 2 3456666544
No 332
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=97.03 E-value=0.0034 Score=76.77 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=69.4
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEee--cCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
-.++|..|...+|+.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++. |.++. .=-|
T Consensus 137 ~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~---G~~r 208 (585)
T 1c0a_A 137 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG--ARD-YLVPSRVHKGKFYALPQ--SPQLFKQLLMMS---GFDR 208 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECSSSTTCEEECCS--CSHHHHHHHHHT---TCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--Ccc-ceecccccCCceEeCcc--CHHHHHHHHHhc---CCCc
Confidence 467888999999999999999999999985332221 122 43322 3466777873 34444 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++|++||+|.....+. ||+|+++|.-+.+
T Consensus 209 vfqI~~~FR~E~~~t~r~pEFT~lE~e~af~d 240 (585)
T 1c0a_A 209 YYQIVKCFRDEDLRADRQPEFTQIDVETSFMT 240 (585)
T ss_dssp EEEEEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred eEEEeceeecCCCCCCcCcccceeeeeecCCC
Confidence 999999999987654444 8999999998864
No 333
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=97.01 E-value=0.0037 Score=76.27 Aligned_cols=99 Identities=11% Similarity=0.106 Sum_probs=69.5
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEee--cCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
-.++|..+...+|+.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++. |.++. .=-|
T Consensus 143 ~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~---G~~r 214 (580)
T 1l0w_A 143 NLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG--ARD-FLVPYRHEPGLFYALPQ--SPQLFKQMLMVA---GLDR 214 (580)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECTTSTTEEEECCS--CSHHHHHHHHHT---TCSE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--CCC-ccccccccCCceeECcc--CHHHHHHHHHHh---ccCC
Confidence 467888999999999999999999999985332221 122 43222 2466677883 44444 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++|+|||+|.....+. ||+|+++|.-+.+
T Consensus 215 vfqI~~~FR~E~~~~~r~pEFT~lE~e~af~d 246 (580)
T 1l0w_A 215 YFQIARCFRDEDLRADRQPDFTQLDLEMSFVE 246 (580)
T ss_dssp EEEEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred eEEEeceeeCCCCCCCcCCCccceeeeecCCC
Confidence 999999999987665444 8999999998864
No 334
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=96.90 E-value=0.0064 Score=73.02 Aligned_cols=102 Identities=10% Similarity=-0.005 Sum_probs=70.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEE-eecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..|...+++.|...||-+|+||++.-. .++.. .+.|.. .+.-|..+.||---=.-.-|.++. .--|+|+
T Consensus 203 ~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~-~gGA~-a~pF~t~~n~~~~~~yL~~SpqLylk~L~v~---G~~rVye 277 (529)
T 4ex5_A 203 TFRARTKAIASIRKFMGDADFMEVETPMLHPI-PGGAA-AKPFVTHHNALDMEMFLRIAPELYLKRLIVG---GFERVFE 277 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCSSS-SCCCEEEETTTTEEEEECSCSHHHHHHHHHT---TCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCCeeecc-CCCCc-ccccccccccCCcceecccCHHHHHHHHHhc---CCCcEEE
Confidence 46788899999999999999999999998532 22221 233322 234467788884222222355542 2359999
Q ss_pred ecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 830 ISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++||+|....+.. ||+|+.+|.-+.+
T Consensus 278 Ig~~FR~E~~~~rH~pEFtmlE~e~af~d 306 (529)
T 4ex5_A 278 INRNFRNEGVSPRHNPEFTMMEFYAAYTD 306 (529)
T ss_dssp EEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred eehheecCCCCCCcccHhHhhhhhhhcCC
Confidence 999999987654333 7999999998753
No 335
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=96.88 E-value=0.0068 Score=73.07 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=71.1
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
-.+++..|...+++.|...||-+|+||++.-. .++. ..+.|... +.-|..+.||- .+++. |.++. .--|+
T Consensus 175 ~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~-~gGa-~a~~F~t~~~~~~~~~yL~~--SpqL~lk~liv~---g~~rV 247 (521)
T 3bju_A 175 KFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGA-VAKPFITYHNELDMNLYMRI--APELYHKMLVVG---GIDRV 247 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCSS-SCCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCceeecc-CCCc-cccceeeecccCCcceEeeC--CHHHHHHHHHhc---CcCce
Confidence 36778899999999999999999999998532 2222 13444332 33478889994 34443 45542 23499
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
|++|++||+|....+.. ||+|+.+|.-+.+
T Consensus 248 yeig~~FR~E~~~trH~pEFtmlE~e~af~d 278 (521)
T 3bju_A 248 YEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 278 (521)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEEEcceeCCCCCCccchhhhhhhhhhhcCC
Confidence 99999999987654333 7999999998853
No 336
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=96.88 E-value=0.0017 Score=73.48 Aligned_cols=96 Identities=11% Similarity=-0.043 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC--Ccc-cc---cceEEEeecCCceEeecCCCcHHHHHHHHhCCCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD--CPQ-FK---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~--~~~-~~---~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~ 823 (1196)
...+.+.++++|...||.++.+|.+.- ..- ... .. ...|.+. +..+||..+++..+|.++. +..
T Consensus 109 ~~~~~~~Ir~if~~~Gf~ev~~~~ve~~~~nFd~Ln~p~dhpaR~~~dt~~i~----e~~vLRThtsp~~lr~l~~-~~~ 183 (327)
T 3pco_A 109 VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFD----TTRLLRTQTSGVQIRTMKA-QQP 183 (327)
T ss_dssp HHHHHHHHHHHHHTTTCBCCCCCSEECTCCCCCTTTCCSSSHHHHHTTCCBSS----SSCEECSCTHHHHHHHHTT-CCS
T ss_pred HHHHHHHHHHHHHHCCCeEEECCCccCCHHHHHhhCCCCCChhhcccccEEeC----CCceecccCCHHHHHHHHh-CCC
Confidence 457888999999999999999998711 111 011 11 1234332 4579999888888998865 457
Q ss_pred ceeEEEecCeeecCCCCCCCcceeEeEEEEeC
Q 000993 824 SFKRYEISSVYRRAIGHSPPNRYLQGDFDIIG 855 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG 855 (1196)
|+|+|.+|+|||.+......-.|+|+..=++|
T Consensus 184 pirifeiGrVyR~d~d~th~p~fhqlegl~v~ 215 (327)
T 3pco_A 184 PIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVD 215 (327)
T ss_dssp SCCBCCEECCBCSCCBTTBCSBCCEEEEEEEE
T ss_pred CeeEEeeccEEecCCCcccCCcccEEEEEEEC
Confidence 99999999999986333333469998655555
No 337
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=96.86 E-value=0.0048 Score=69.17 Aligned_cols=118 Identities=9% Similarity=0.039 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC-Ccc-c-c---cceEEEeecCCceEeecCCCcHHHHHHHHhCC-C
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD-CPQ-F-K---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-K 822 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~-~~~-~-~---~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~-~ 822 (1196)
...+.+.++++|...||.|+.+|.+.- ... ... . . ...+.+. +..+||+-+++.+.|.++.|. .
T Consensus 55 ~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~~~nf~~l~~~~~~par~~~d~~~l~----e~~vLRtsl~p~ll~~l~~N~~~ 130 (294)
T 2rhq_A 55 LTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYIT----DEILMRTHTSPVQARTMEKRNGQ 130 (294)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSS----SSEEECSSSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcceeeehhhHHhhCCCCCccccccCCcEEEc----CcceeeccCHHHHHHHHHhcCCC
Confidence 457888999999999999998777611 111 111 0 0 1123342 567999999999999998774 5
Q ss_pred CceeEEEecCeeecCC-CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc-CC
Q 000993 823 SSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 878 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l-gi 878 (1196)
.|+|+|.+|+|||++. ......||+|+.+=+.|..-.. .++..++..+++.+ |+
T Consensus 131 ~~~riFEiG~Vfr~d~~d~~h~~Ef~~Le~~~~g~~~df--~dlKg~le~ll~~l~g~ 186 (294)
T 2rhq_A 131 GPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKM--SDLKGTLELVAKKLFGA 186 (294)
T ss_dssp SCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEEESSCCH--HHHHHHHHHHHHHHHCT
T ss_pred CCccEEEEcCEEecCCCCCCCCChhhEEEEEEECCCCCH--HHHHHHHHHHHHHHhCC
Confidence 6999999999999743 2222348999988888852111 23444455555555 55
No 338
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.86 E-value=0.0031 Score=74.23 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=28.1
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+...++|+|++|.|||++.++ ++|+||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 456799999999999998776 99999998864
No 339
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=96.85 E-value=0.003 Score=74.88 Aligned_cols=113 Identities=14% Similarity=0.074 Sum_probs=77.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..|...+++.|...||-+|+||++.-... |. .++|.+ +.-|+.+.||----.-.-++++. --|+|+
T Consensus 155 ~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~eGg---~~~f~~-~~~~~~~~L~~SpqL~lq~l~~g----~~rVye 226 (456)
T 3m4p_A 155 VLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGG---STLFKL-QYFNEPAYLTQSSQLYLESVIAS----LGKSFC 226 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEEC---------CCCCEE-EETTEEEEECSCCHHHHHTTHHH----HSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCCCCc---cccccc-cccCCCcccccCHHHHHHHHHhc----cCcEEE
Confidence 4678889999999999999999999999843322 22 123433 44477788886544444344431 359999
Q ss_pred ecCeeecCCCCCCCc--ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 830 ISSVYRRAIGHSPPN--RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~~--ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+|++||+|.....|. ||+|+++|.-+.+ --+++.++-+.++.
T Consensus 227 ig~~FR~E~~~t~rH~pEFtmlE~e~af~d----~~d~m~~~E~li~~ 270 (456)
T 3m4p_A 227 MLSSYRAEQSRTVRHLAEYLHLEAELPFIS----FEDLLNHLEDLVCT 270 (456)
T ss_dssp EEEEECCCSCCCSSCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred EEhheecCCCCCCcchHHHHHhHHHHhcCC----HHHHHHHHHHHHHH
Confidence 999999987654333 8999999998863 23456666555544
No 340
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis}
Probab=96.70 E-value=0.0089 Score=63.75 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC---C-CcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCCC---Ccee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK---SSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~~---~P~r 826 (1196)
.+++++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|.. .++|
T Consensus 6 ~~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~v~ 85 (213)
T 3ig2_A 6 SNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLK 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCSSSCGGGCEEBSSGGGCSCCEECSCSHHHHHHHHHHC------CCE
T ss_pred HHHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhcccCcCCeEEEeCCcchhHHHHHHHhHHHHHHHHHHHhcCCCCCee
Confidence 45788889999999999999999983221 1 1112245677777764 4558999999999999988643 3689
Q ss_pred EEEecCeeecCCC-------CCCCcceeEeEEEEeCCC--------CccchH-HHHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-EvI~la~~~L~~lgi~ 879 (1196)
+|.+|+||+.+.. ..+..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~ 154 (213)
T 3ig2_A 86 FFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGLD 154 (213)
T ss_dssp EEEEEEEEEECC----------CEEEEEEEEEEEEEEECCSCC----CHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEEeeeEEecCcccccccccccccchhHEEEEEEECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 123356777887777732 123453 5566667777888875
No 341
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.62 E-value=0.01 Score=71.46 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.8
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTsLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (648)
T 2odr_B 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (648)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666777777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (648)
T 2odr_B 277 GFT 279 (648)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
No 342
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.61 E-value=0.01 Score=71.44 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.8
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~lr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (665)
T 2odr_A 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (665)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (665)
T 2odr_A 277 GFT 279 (665)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
No 343
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.60 E-value=0.011 Score=71.48 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.7
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (685)
T 2odr_D 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (685)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEeccEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (685)
T 2odr_D 277 GFT 279 (685)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
No 344
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.60 E-value=0.011 Score=71.37 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=53.7
Q ss_pred eEeecCCCcHHHHHHHHh---CCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~---~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~EfhqLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (701)
T 2odr_C 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (701)
T ss_dssp EEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEEeeEEccCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999998854443333 44679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (701)
T 2odr_C 277 GFT 279 (701)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 345
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=96.55 E-value=0.016 Score=70.70 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=76.2
Q ss_pred hhHhhHHHHHHHHHHHH-HcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFR-QHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~-~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
..++|..+...+|+.|. ..||-+|+||++.-...+.. .. |.+. ...|..+.|+- .+++. +.++. .=-|
T Consensus 147 ~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~st~~GA--~~-F~v~~~~~g~~~~L~q--Spql~kq~l~v~---g~~r 218 (617)
T 4ah6_A 147 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KE-FLVPSREPGKFYSLPQ--SPQQFKQLLMVG---GLDR 218 (617)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCCCCSSS--CC-CEEECSSTTCEEECCS--STTHHHHHHHHT---SCSE
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccCCCCCC--cC-ceeccccCCccccccc--CHHHHHHHHHhc---ccCc
Confidence 36788899999999996 79999999999843222221 12 3332 23477788874 23333 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
+|++|++||+|.....+. ||+|+++|.-+.+ --+++.++-+.+..+
T Consensus 219 vfqi~~~FR~E~~~t~r~pEFt~lE~e~af~d----~~d~m~~~E~l~~~~ 265 (617)
T 4ah6_A 219 YFQVARCYRDEGSRPDRQPEFTQIDIEMSFVD----QTGIQSLIEGLLQYS 265 (617)
T ss_dssp EEEEEEEECCCSSCSSSCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEEEhheecccCCCCcCcceecceeeecCCC----HHHHHHHHHHHHHHH
Confidence 999999999987665444 7999999998753 234566665555554
No 346
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=96.54 E-value=0.011 Score=62.92 Aligned_cols=125 Identities=14% Similarity=0.020 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecCC----CcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCC---CCcee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGD----CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQ---KSSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~----~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~---~~P~r 826 (1196)
.+.+++.+++.+...||.||.|-+|.-... .....+...++.++-. +.-+||+.+.+.+.+.++.|. ..++|
T Consensus 6 ~~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~~~ 85 (213)
T 3ica_A 6 RYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLY 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhcccCcCCeEEecCCccHHHHHHHHHhHHHHHHHHHHHHcCCCCCee
Confidence 457888999999999999999999832211 1111234566777765 455899999999999888742 23699
Q ss_pred EEEecCeeecCCCC-------CCCcceeEeEEEEeCCC--------CccchH-HHHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIGH-------SPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~-------~~~~ef~Q~GvEiiG~~--------~~~aDa-EvI~la~~~L~~lgi~ 879 (1196)
+|.+|+||+.+... ....|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~ 154 (213)
T 3ica_A 86 LFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIE 154 (213)
T ss_dssp EEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccccccccccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 99999999974311 22356777877777742 234554 6666777778888886
No 347
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=96.39 E-value=0.0097 Score=71.62 Aligned_cols=97 Identities=9% Similarity=0.049 Sum_probs=60.6
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHH--HHHHhCCCCceeEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI--RWAISNQKSSFKRY 828 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~~ 828 (1196)
-.+++..+...+++.|...||-+|+||++.-... + -..+.|.+ +.-|+.+.|+- .+++. |.++ ..--|+|
T Consensus 243 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-e-gga~~F~v-~~~~~~~yL~~--Spql~~k~ll~---~g~~rVf 314 (548)
T 3i7f_A 243 IFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS-E-GGSNIFEV-KYFDRKAYLAQ--SPQLYKQMAIM---GDFRKVF 314 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSBC----------------------CCBCS--CTHHHHHHHHT---TTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCEEecccC-C-CCcceeEE-ecCCCceEecc--CHHHHHHHHHh---cCcCcEE
Confidence 4678889999999999999999999999833322 1 11234432 22345567774 33444 4443 2345999
Q ss_pred EecCeeecCCCCCCC--cceeEeEEEE-eC
Q 000993 829 EISSVYRRAIGHSPP--NRYLQGDFDI-IG 855 (1196)
Q Consensus 829 Y~G~VfR~e~~~~~~--~ef~Q~GvEi-iG 855 (1196)
++|++||+|.....| -||+|+++|. |+
T Consensus 315 eI~~~FR~E~~~t~RHl~EFtmlE~e~af~ 344 (548)
T 3i7f_A 315 EVGPVFRAENSNTRRHLTEFEGLDIEMEIV 344 (548)
T ss_dssp EEEEECCCSCCCSSSCCSCEEEEEEEEECS
T ss_pred EEeeeEecCCCCCCCcchhhhchhhhhhhh
Confidence 999999998765433 3899999996 44
No 348
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.21 E-value=0.026 Score=62.96 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.++|+|+.|.||+ ..++.+.|+||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 3799999999999 5667889999998863
No 349
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.05 E-value=0.034 Score=62.81 Aligned_cols=57 Identities=18% Similarity=0.123 Sum_probs=42.0
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQA 448 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~ 448 (1196)
-.+.|+.|.+..+|+... ++..+++|+.... ....+.+|+..|+.|. ...+++++..
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~ 99 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGI 99 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence 357899999999999875 4778999986532 2456889999998883 2456666654
No 350
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=95.87 E-value=0.03 Score=68.78 Aligned_cols=121 Identities=9% Similarity=0.007 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHcCCccccccceeec----CC-C-cccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCCC--Ccee
Q 000993 756 DYVVQVTKEMFRQHCAKHLEIEPMYLL----GD-C-PQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK--SSFK 826 (1196)
Q Consensus 756 ~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~-~-~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~~--~P~r 826 (1196)
+.+.+.+++++...||.|+.|+.|.-. .. + .......+++.++-. +.-+||+.+.+.+.+.++.|.. .|+|
T Consensus 394 ~~~~~~ir~~l~~~Gf~Evitysf~s~~~~~~~l~~~~~~~~~v~L~NPis~e~svmRtsLlpgLL~~l~~N~~~~~~vr 473 (589)
T 3l4g_B 394 NKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLK 473 (589)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHHHHHHHHTTTSCSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEecCcccCHHHHHHHhCCCCCCCCeEEEcCCCchhHhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 456788999999999999999999211 11 1 111134566777665 3458999999999999987643 4999
Q ss_pred EEEecCeeecCCC-CCCCcceeEeEEEEeCCCCccchHH-HHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIG-HSPPNRYLQGDFDIIGGASALTEAE-VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~-~~~~~ef~Q~GvEiiG~~~~~aDaE-vI~la~~~L~~lgi~ 879 (1196)
+|.+|+|||.+.. ..+.+++.|+++=+.|... |.+ +=.++..+++.+|++
T Consensus 474 lFEiG~Vf~~d~~~~~~~~e~~~la~~~~g~~~---~f~~lkg~le~ll~~lg~~ 525 (589)
T 3l4g_B 474 LFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNP---GFEIIHGLLDRIMQLLDVP 525 (589)
T ss_dssp EEEEEEEEEECTTSTTSEEEEEEEEEEEESSSC---CHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccCCccccEEEEEEECCCC---CHHHHHHHHHHHHHHcCCC
Confidence 9999999997432 2234578899988888542 222 223333445555553
No 351
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.66 E-value=0.022 Score=64.48 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.0
Q ss_pred CCCcccCCCcCcEEecCC----CCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~ 568 (1196)
..++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999875 6789999998864
No 352
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.50 E-value=0.13 Score=56.96 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=40.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~ 438 (1196)
+..-++.+|.|..+.||++... +|+.|++|+-..... .....+..|+..|+.|.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP--ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHH
Confidence 3455788999999999999875 899999997653322 22345778999999884
No 353
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.41 E-value=0.047 Score=64.47 Aligned_cols=61 Identities=11% Similarity=0.264 Sum_probs=40.6
Q ss_pred EEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCe-eeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 449 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnI-V~l~~~~ 449 (1196)
.++.|+.|-...||++.... ++..+++|+.... .. ...+.+|..+++.+...++ .++++.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~---~~~li~E~~~l~~L~~~g~~P~l~~~~ 145 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIF 145 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 35678889999999998752 2578999987321 11 1455689999988843333 4555543
No 354
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.32 E-value=0.087 Score=59.22 Aligned_cols=47 Identities=28% Similarity=0.293 Sum_probs=32.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~ 438 (1196)
..|+ |....||++... +|+.+++|..+.... ....+..|+.+++.+.
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~ 78 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW---TADQILEEHQFALQLV 78 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS---CHHHHHHHHHHHHHHH
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHH
Confidence 4566 788899987653 566799998863222 2345677888888874
No 355
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.23 E-value=0.048 Score=61.22 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=31.1
Q ss_pred HHHHHHHHHh-------CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 528 IVEGLAHIHG-------QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 528 Ia~gL~yLHs-------~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+...+++++. .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus 170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3444555552 3689999999999998776568999998853
No 356
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.01 E-value=0.057 Score=62.63 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred eeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeee
Q 000993 387 QPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAW 449 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~ 449 (1196)
+.|..|-...+|++.... +++.|++|+... . ......+.+|..+++.+. +.-..++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~ 123 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--I-LQGVDSLVLESVMFAILAERSLGPQLYGVF 123 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--c-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc
Confidence 567778888899988642 357899997522 1 122455678999998884 32234555443
No 357
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=94.74 E-value=0.13 Score=65.33 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecCCCcc--cccc-eEEEeecCC-ceEeecCCCcHHHHHHHHhC---CCCceeE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQ--FKRN-TVKLLTHGG-DLLELSHELRLPFIRWAISN---QKSSFKR 827 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~--~~~~-my~f~D~~G-~~laLRPD~T~~iaR~~a~~---~~~P~r~ 827 (1196)
.+.+.+.+++.+...||.|+.|..|.-...... .... .+++.++-. +.-+||+.+.+...+.++.| +..|+|+
T Consensus 495 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~~v~L~NPis~e~svLRtsLlpgLL~~l~~N~~r~~~~vrl 574 (795)
T 2rhq_B 495 RQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRL 574 (795)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCccCHHHHHhhCCCCCceEEEcCCCchhhhhhhhccHHHHHHHHHHHhcCCCCCeEE
Confidence 456788899999999999999999832211110 1233 467777654 45589999999999988875 3569999
Q ss_pred EEecCeeecCCCCCCCcceeEeEEEEeCCC
Q 000993 828 YEISSVYRRAIGHSPPNRYLQGDFDIIGGA 857 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~ 857 (1196)
|.+|+|||.+.......++.|+++=+.|..
T Consensus 575 FEiG~Vf~~d~~~~~~~e~~~la~l~~G~~ 604 (795)
T 2rhq_B 575 YEIGRVFFGNGEGELPDEVEYLSGILTGEY 604 (795)
T ss_dssp EEEEEEEECCCTTSCCEEEEEEEEEEESEE
T ss_pred EEEeeEEecCCcccCcchhhEEEEEEEecc
Confidence 999999996322101267999999888853
No 358
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.57 E-value=0.06 Score=61.87 Aligned_cols=28 Identities=29% Similarity=0.429 Sum_probs=24.1
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
.++|+|+++.|||++.++ +.|+||..|.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999997654 8999999875
No 359
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=94.21 E-value=0.26 Score=58.60 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=38.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCe-eeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 449 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnI-V~l~~~~ 449 (1196)
.++.|+.|-...+|++.....+..+++|+....... . -...+|..+++.|...++ .++++.+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~-idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--I-INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--C-SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--h-cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 356788899999999987643578999986432111 1 112579999998865554 4555544
No 360
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.08 E-value=0.25 Score=56.17 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.6
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3589999999999999888899999988764
No 361
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=93.87 E-value=0.18 Score=63.62 Aligned_cols=116 Identities=12% Similarity=0.004 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC---CCcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhC---C-CCcee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISN---Q-KSSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~---~-~~P~r 826 (1196)
.+.+.+.+++.+...||.|+.|-.|.-.. .... ....+++.++-. +.-+||+.+.+.+.+.++.| + ..|+|
T Consensus 491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~-~~~~v~L~NPis~d~svLRtsLlpgLL~~l~~N~~r~~~~~vr 569 (785)
T 1b7y_B 491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRL-DPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERAL 569 (785)
T ss_dssp HHHHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTC-CCCSCEESSCSSTTSSEECSCSHHHHHHHHHHHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHhcCC-CCCeEEEcCCCchhhhhhhhhhHHHHHHHHHHHhhcCCCCCeE
Confidence 45678889999999999999999982221 1110 133466776654 44489999999999988875 3 57999
Q ss_pred EEEecCeeecCCCCCCCcceeEeEEEEeCCCCc-------cchH-HHHHHHHHHHHHcCC
Q 000993 827 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGASA-------LTEA-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~-------~aDa-EvI~la~~~L~~lgi 878 (1196)
+|.+|+||| + .++.|+++=+.|.... ..|. ++-.++..+|..||+
T Consensus 570 lFEiG~Vf~-~------~e~~~lagl~~G~~~~~~w~~~~~vdf~dlKg~le~ll~~lgi 622 (785)
T 1b7y_B 570 LFEVGRVFR-E------REETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGL 622 (785)
T ss_dssp EEEEEEEES-S------SEEEEEEEEEESSCBSCSSSSCCBCSHHHHHHHHHHHHHHHTC
T ss_pred EEEEeeeec-c------ChhhEEEEEEECCCcccccCccCCcCHHHHHHHHHHHHHHcCC
Confidence 999999999 2 6799999999996421 2343 445555555666665
No 362
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.16 E-value=0.97 Score=52.63 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=26.2
Q ss_pred CCcccCCCcCcEEecCC------CCeEEeccCcch
Q 000993 539 GIIHRDLTPNNIFFDAR------NDIKIGDFGLAK 567 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~------~~vKL~DFGlA~ 567 (1196)
.++|+|+.+.|||++.+ +.+.|+||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 48999999999999887 789999999885
No 363
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=89.39 E-value=1.3 Score=51.75 Aligned_cols=92 Identities=13% Similarity=0.029 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHc--------CCccccc-cce-----eec--CC-Cccc---ccceEEEeecCCceEeecCCCcHHHHH
Q 000993 756 DYVVQVTKEMFRQH--------CAKHLEI-EPM-----YLL--GD-CPQF---KRNTVKLLTHGGDLLELSHELRLPFIR 815 (1196)
Q Consensus 756 ~~I~~~i~~~f~~~--------Gy~~I~t-P~~-----~~~--~~-~~~~---~~~my~f~D~~G~~laLRPD~T~~iaR 815 (1196)
..+.+.++++|... ||+++.+ |.+ .|. +- .+.. ....|.+ + +..+||...|+..+|
T Consensus 51 ~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi-~---~~~vLRThts~~~~~ 126 (415)
T 3cmq_A 51 WLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYL-N---RTHMLRAHTSAHQWD 126 (415)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBS-S---SSEEECSSGGGGHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEe-c---CCeEEcCCCcHHHHH
Confidence 45666666676655 9999998 666 111 11 1111 1333433 2 457999999999999
Q ss_pred HHHhCCCCceeEEEecCeeecCC-CCCCCcceeEeE-EEEe
Q 000993 816 WAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGD-FDII 854 (1196)
Q Consensus 816 ~~a~~~~~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~G-vEii 854 (1196)
.+..+ .| |++.+|.|||++. ....+..|+|.. +-+|
T Consensus 127 ~l~~~--~~-k~~~~G~VyR~D~~da~h~n~fhQ~egv~lf 164 (415)
T 3cmq_A 127 LLHAG--LD-AFLVVGDVYRRDQIDSQHYPIFHQLEAVRLF 164 (415)
T ss_dssp HHHTT--CS-EEEEEEEEECCCCCBTTBCSEEEEEEEEEEE
T ss_pred HHHHC--CC-CEEEeeeEEeccchhhhhhHHhcCCCcEEEE
Confidence 98764 35 9999999999964 344555777765 5554
No 364
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=88.41 E-value=0.52 Score=55.35 Aligned_cols=29 Identities=28% Similarity=0.555 Sum_probs=25.9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.++|+|+.+.||+ +.++.+.|+||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 4899999999999 7788999999998863
No 365
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.86 E-value=2.2 Score=49.53 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=24.8
Q ss_pred CcccCCCcCcEEe------cCCCCeEEeccCcchh
Q 000993 540 IIHRDLTPNNIFF------DARNDIKIGDFGLAKF 568 (1196)
Q Consensus 540 IiHrDLKp~NILl------d~~~~vKL~DFGlA~~ 568 (1196)
++|+|+.+.|||+ +.+..++++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6899999999999 3456799999998863
No 366
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=82.42 E-value=2.3 Score=53.82 Aligned_cols=119 Identities=8% Similarity=-0.076 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHcCCccccccceeecC---C-CcccccceEEEeecCCce-EeecCCCcHHHHHHHHhCC---CCceeEEE
Q 000993 758 VVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGGDL-LELSHELRLPFIRWAISNQ---KSSFKRYE 829 (1196)
Q Consensus 758 I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G~~-laLRPD~T~~iaR~~a~~~---~~P~r~~Y 829 (1196)
..+.+++.+...||.|+.|-+|.-.. . + ..+...++.++-..+ =+||+.+-+.+...++.|. ..++|+|.
T Consensus 494 ~~~~~r~~l~~~G~~Evitysf~~~~~~~~~~--~~~~~v~l~NPis~e~svmRtsLlpgLL~~~~~N~~r~~~~v~lFE 571 (795)
T 3pco_B 494 SLKRVKTLLNDKGYQEVITYSFVDPKVQQMIH--PGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFE 571 (795)
T ss_dssp CHHHHHHHHHHTTCEECCCCSEECHHHHHHHS--SSCCCCBCSSCSCSTTCEECSSSHHHHHHHHHHHHTSSCCCCEEEE
T ss_pred HHHHHHHHHHHCCCeeeeccCcCCHHHHHhhC--CCCCeEEEcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 45678888899999999999982111 1 1 123445666766544 4799999999999888753 34799999
Q ss_pred ecCeeecCCC-CCCCcceeEeEEEEeCCCC--------ccchH-HHHHHHHHHHHHcCC
Q 000993 830 ISSVYRRAIG-HSPPNRYLQGDFDIIGGAS--------ALTEA-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 830 ~G~VfR~e~~-~~~~~ef~Q~GvEiiG~~~--------~~aDa-EvI~la~~~L~~lgi 878 (1196)
+|+||+.+.. ..+..|...+++=+.|... ...|. ++-.++..+|..||+
T Consensus 572 iG~Vf~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~dF~dlKg~ve~ll~~lg~ 630 (795)
T 3pco_B 572 SGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGK 630 (795)
T ss_dssp EEEEEEECTTSSTTEEEEEEEEEEEESBSSCSCSSSCCCBCCHHHHHHHHHHHTTTSSC
T ss_pred eeeEEecCCCcccCcchhheEEEEEECCCcccccccCCCCCCHHHHHHHHHHHHHHcCC
Confidence 9999987432 2234567777777777532 23454 444455555666665
No 367
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.29 E-value=0.24 Score=58.98 Aligned_cols=75 Identities=11% Similarity=0.033 Sum_probs=21.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEE------EEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC----ccc
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAV------KKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG----VAD 456 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAV------K~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~----~~~ 456 (1196)
+.|| ||.||++.+.....+||| |..+....+......+.+|..+++.++|||+++.++.-..+- .++
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~~~~pt~C~ 224 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCE 224 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEECCSSCCBCT
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEeecCCCCcch
Confidence 3455 999999999765568888 665433333334456888999999999999999887654332 233
Q ss_pred cCCCCcCC
Q 000993 457 FDGDSMWG 464 (1196)
Q Consensus 457 ~~~~~~~~ 464 (1196)
.....+|+
T Consensus 225 ~C~~~l~g 232 (463)
T 3cxl_A 225 YCANFMWG 232 (463)
T ss_dssp TTCCBCCS
T ss_pred hhhhhhhh
Confidence 44445554
No 368
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=59.54 E-value=3.8 Score=48.11 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=16.1
Q ss_pred CCcceecccHHHHHhhcc
Q 000993 1062 PSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1062 ~pAvGfaiglerl~~~L~ 1079 (1196)
+|+.|||+|+|||+.+|.
T Consensus 397 PP~~G~glGiDRLvmll~ 414 (434)
T 1x54_A 397 VPHSGFGLGVERLVAWVL 414 (434)
T ss_dssp CCEEEEEEEHHHHHHHHT
T ss_pred CCceEEEEcHHHHHHHHc
Confidence 499999999999988875
No 369
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=57.89 E-value=4.4 Score=47.48 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=16.1
Q ss_pred CCcceecccHHHHHhhcc
Q 000993 1062 PSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1062 ~pAvGfaiglerl~~~L~ 1079 (1196)
+|+.|||+|+|||+.+|.
T Consensus 392 PP~~G~glGiDRLvmll~ 409 (429)
T 1wyd_A 392 PPHAGFGMGLARLMVMLT 409 (429)
T ss_dssp CCEEEEEEEHHHHHHHHH
T ss_pred CCceEEEEcHHHHHHHHc
Confidence 499999999999988775
No 370
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=46.56 E-value=8.6 Score=45.34 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=36.3
Q ss_pred EEEEEecCCCCccccccccccccc----cccchhhhhcccccc--------ccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1014 FFQVFSVKEKYPATLVEGTLLAVG----GRYDYLLHRMWDREY--------VGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1014 vFe~~~~~~~~~~~~~~~~~I~~G----GRYD~L~~~fg~~~~--------~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
-|++|..+.+ .|++| =+|+.|.++|-.... +..+--+ .+|+-||+||+|||+.++.
T Consensus 369 rfdL~~~G~g---------Ei~~G~~r~~d~~~l~~r~~~~g~~~~~~~~yld~~~~G-~pP~gG~GlGidRLvm~lt 436 (456)
T 3m4p_A 369 SVDLLMPGVG---------EIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYG-SCPHGGYGLGVERLVMWLL 436 (456)
T ss_dssp EEEEEETTTE---------EEEEEEEBCCCHHHHHHHHHTTTCCCGGGHHHHGGGTSS-CCCEEEEEEEHHHHHHHHH
T ss_pred EEEEEeCCce---------EEccceeecCCHHHHHHHHHHcCCCHHHHHHHHHHHHcC-CCcccEEEEcHHHHHHHHc
Confidence 5888887643 47777 478888877732100 0111112 2688899999999988765
No 371
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=44.74 E-value=14 Score=36.36 Aligned_cols=28 Identities=18% Similarity=0.206 Sum_probs=24.1
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccCCCC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPEKGL 61 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~~~~ 61 (1196)
-.+.|.|.+|++||..||.+.+...++.
T Consensus 85 yeFkLefdiP~tYP~tPPeI~Fp~ldgk 112 (168)
T 3kpa_A 85 YEFEMNFDIPVTYPQAPPEIALPELEGK 112 (168)
T ss_dssp EEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred eEEEEEEeCCccCCCCCCEeecccccCc
Confidence 4788999999999999999999776543
No 372
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=44.12 E-value=22 Score=34.55 Aligned_cols=26 Identities=19% Similarity=0.268 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 70 gG~f~l~i~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 70 GEKFQLLFKFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp TCEEEEEEEECTTTTTSCCEEEEESS
T ss_pred cEEEEEEEECCCCCCCCCCEEEEeCC
Confidence 45688899999999999999998764
No 373
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=40.76 E-value=17 Score=36.58 Aligned_cols=25 Identities=16% Similarity=0.200 Sum_probs=22.3
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
-.+.|.|.++++||..||.+.+...
T Consensus 83 y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 83 YEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp EEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred eEEEEEEECCCCCCCCCCeeeeCCC
Confidence 3788999999999999999999664
No 374
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=38.75 E-value=19 Score=38.04 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=48.7
Q ss_pred cEEEEEeeecCC--CHHHHHhhcCCCCHHHHHHHHHHHHHHHH-HHHhCCCcccCCCcCcEEecCCCCeEEeccCcc
Q 000993 493 TYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLA-HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 566 (1196)
Q Consensus 493 ~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qIa~gL~-yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA 566 (1196)
..+.|.++.-++ ++..+ ..++....++++.+|+.... ++++ -+|--|.|+||+++.++.++|.-.|+-
T Consensus 61 D~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~~--r~tf~l~P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 61 DEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSAR--RLIFIVCPENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp SEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCSS--SEECCCCGGGEEECTTCCEEESCCEET
T ss_pred CEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhhC--ceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence 444555554432 44433 34788889999888888766 5544 478889999999999999999876654
No 375
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=33.43 E-value=39 Score=33.26 Aligned_cols=26 Identities=27% Similarity=0.246 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (150)
T 1z2u_A 50 GGVFFLTIHFPTDYPFKPPKVAFTTR 75 (150)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCcEEEEecC
Confidence 34688899999999999999998764
No 376
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=33.06 E-value=39 Score=33.95 Aligned_cols=26 Identities=23% Similarity=0.246 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 67 gG~f~l~i~fp~~YP~~PP~V~F~T~ 92 (166)
T 2ayv_A 67 GGVFFLNIHFPSDYPFKPPKVNFTTK 92 (166)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCEEEEEEeCCCcCCCCCceeeeccC
Confidence 34688899999999999999987664
No 377
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=33.05 E-value=22 Score=36.56 Aligned_cols=24 Identities=8% Similarity=0.160 Sum_probs=21.0
Q ss_pred eeEEEEEeCCCCCCCCCceeeccC
Q 000993 35 SEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 35 ~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.+.|.+.++++||.+||.+.+...
T Consensus 90 ~f~l~i~fp~~YP~~PP~V~f~tp 113 (186)
T 1zuo_A 90 YILLNFSFKDNFPFDPPFVRVVLP 113 (186)
T ss_dssp SEEEEEECCTTTTSSCCEEEEEES
T ss_pred EEEEEEECCCCCCCCCCeEEEeCC
Confidence 578899999999999999987654
No 378
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=32.66 E-value=42 Score=32.99 Aligned_cols=26 Identities=23% Similarity=0.241 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 48 gg~f~~~i~fp~~YP~~PP~v~f~t~ 73 (149)
T 1fxt_A 48 GGKFVVDIEVPMEYPFKPPKMQFDTK 73 (149)
T ss_dssp SSEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 34688999999999999999998763
No 379
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=32.28 E-value=42 Score=33.40 Aligned_cols=26 Identities=15% Similarity=-0.026 Sum_probs=22.4
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 59 gg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 59 GGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 34688899999999999999998765
No 380
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=32.28 E-value=44 Score=31.84 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 52 gg~f~~~i~fp~~YP~~PP~v~f~t~ 77 (125)
T 2fo3_A 52 NEVYKLKIIFPDDYPLKPPIVYFLQK 77 (125)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEECSS
T ss_pred CCEEEEEEEcCCCCCCCCCEEEEeCC
Confidence 34688899999999999999998764
No 381
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=32.22 E-value=48 Score=27.11 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=30.0
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.+.|.- ++.++++..+|.+.|.+.+.+.| |..
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~~l--g~~ 33 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAEIY--GMD 33 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7788888 89999999999999999999999 754
No 382
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=32.06 E-value=42 Score=33.41 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 57 gg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 57 GGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 34678999999999999999998763
No 383
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=32.02 E-value=42 Score=33.70 Aligned_cols=26 Identities=27% Similarity=0.246 Sum_probs=22.4
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 65 gg~f~l~i~fp~~YP~~PP~v~F~T~ 90 (165)
T 2c4o_A 65 GGVFFLTIHFPTDYPFKPPKVAFTTR 90 (165)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CceEEEEEECCCcCCCCCCEEEEecC
Confidence 34688899999999999999998765
No 384
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=31.91 E-value=43 Score=32.90 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 47 gg~f~~~i~fp~~YP~~PP~v~f~t~ 72 (149)
T 2r0j_A 47 GGTYKLELFLPEQYPMEPPKVRFLTK 72 (149)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEECSC
T ss_pred CCEEEEEEeCCcccCCCCCeeEeccC
Confidence 45688899999999999999998765
No 385
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=31.48 E-value=45 Score=32.30 Aligned_cols=26 Identities=19% Similarity=0.209 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 66 gg~f~~~i~fp~~YP~~PP~v~f~t~ 91 (136)
T 2h2y_A 66 NEVYKIKIIFPDNYPLKPPIVYFLQK 91 (136)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEECSS
T ss_pred CCEEEEEEEeCCCCCCCCCEEEEeCC
Confidence 34688999999999999999998764
No 386
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=31.28 E-value=45 Score=33.20 Aligned_cols=26 Identities=19% Similarity=0.349 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.=...|.+.++++||.+||.+.....
T Consensus 71 gG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 71 NRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred CcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 34588999999999999999998775
No 387
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=31.25 E-value=46 Score=32.25 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.++|.+.....
T Consensus 56 gg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 56 NRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred ceEEEEEEECCCCCCCCCCceEEEcc
Confidence 34688999999999999999998774
No 388
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=31.22 E-value=45 Score=32.89 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (152)
T 2aak_A 50 GGTFKLSLQFSEDYPNKPPTVRFVSR 75 (152)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCCEEEEecC
Confidence 34688899999999999999998763
No 389
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=30.93 E-value=45 Score=32.98 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=22.4
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 51 gg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (154)
T 2c2v_B 51 GGTFKLELFLPEEYPMAAPKVRFMTK 76 (154)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCeEEEEEEcCCCCCCCCCEEEeecC
Confidence 34688899999999999999998774
No 390
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=30.91 E-value=45 Score=33.05 Aligned_cols=26 Identities=31% Similarity=0.447 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 55 gg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (156)
T 2e2c_A 55 SLKYKLTLEFPSDYPYKPPVVKFTTP 80 (156)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 34678899999999999999998764
No 391
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=30.83 E-value=45 Score=33.01 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 51 gg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (155)
T 1jat_A 51 DGIFELELYLPDDYPMEAPKVRFLTK 76 (155)
T ss_dssp TEEEEEEEECCTTTTTSCCEEEECSC
T ss_pred CcEEEEEEEcCCCCCCCCCcceeecc
Confidence 35688899999999999999988764
No 392
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=30.38 E-value=46 Score=33.24 Aligned_cols=26 Identities=23% Similarity=0.177 Sum_probs=21.8
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (164)
T 3h8k_A 50 FGVFPAILSFPLDYPLSPPKMRFTCE 75 (164)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCEEEEEEECCCCCCCCCCEEEEcCC
Confidence 34577889999999999999987654
No 393
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=30.37 E-value=46 Score=33.64 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=22.4
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 64 gG~f~~~i~fp~~YP~~PP~v~F~T~ 89 (172)
T 2awf_A 64 GGVFKAHLTFPKDYPLRPPKMKFITE 89 (172)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CcEEEEEEECCcccCCCCCcccccCC
Confidence 34688899999999999999998765
No 394
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=29.85 E-value=49 Score=32.68 Aligned_cols=25 Identities=12% Similarity=0.171 Sum_probs=21.7
Q ss_pred cceeEEEEEeCCCCCCCCCceeecc
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITP 57 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~ 57 (1196)
.-...+.+.++++||.+||.+....
T Consensus 45 gg~f~~~i~fp~~YP~~pP~v~f~t 69 (152)
T 2onu_A 45 GGIWKVHVTLPDDYPFASPSIGFMN 69 (152)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESS
T ss_pred ceEEEEEEcCcccCCCCCCeEEEec
Confidence 3467889999999999999999876
No 395
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=29.62 E-value=50 Score=32.52 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=22.0
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.++|.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~pP~v~f~t~ 75 (151)
T 4gpr_A 50 GGLFFLDVHFPVDYPFKAPRVTFMTK 75 (151)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCcceeEEecC
Confidence 45588899999999999999987664
No 396
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=29.14 E-value=47 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=30.1
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.++|...++.++++..+|.+.|.+.+.+.| |.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~l--g~p 34 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSL--DAP 34 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7788887888999999999999999999998 754
No 397
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=28.96 E-value=26 Score=36.85 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcc
Q 000993 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 566 (1196)
Q Consensus 514 ~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA 566 (1196)
..++....++++.+|+....++++. +|--|.|+||+++.++.+++.-.|+-
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~r--~tf~L~P~NL~f~~~~~p~i~~RGik 126 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRTR--YTFVLAPDELFFTRDGLPIAKTRGLQ 126 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGSS--EECCCSGGGEEECTTSCEEESCCEET
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcCc--eEEEEecceEEEcCCCCEEEEEccCc
Confidence 3478889999999999888655544 78889999999999999999866654
No 398
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=28.83 E-value=52 Score=32.89 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 75 gG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 75 NRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred CeEEEEEEECCCcCCCCCcEEEEecC
Confidence 34688999999999999999998765
No 399
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=28.29 E-value=50 Score=26.49 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.0
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.++|...++.++++..+|.+.|.+.+.+.| |..
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~l--g~~ 34 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETT--GAS 34 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7788887788999999999999999999998 753
No 400
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=28.09 E-value=54 Score=32.68 Aligned_cols=26 Identities=23% Similarity=0.234 Sum_probs=22.1
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 58 gg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 58 GGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEEcCcccCCCCCEEEEecC
Confidence 34578899999999999999998764
No 401
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=27.75 E-value=52 Score=32.66 Aligned_cols=25 Identities=28% Similarity=0.207 Sum_probs=21.7
Q ss_pred cceeEEEEEeCCCCCCCCCceeecc
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITP 57 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~ 57 (1196)
.-...+.+.++++||.+||.+....
T Consensus 55 gg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 55 GGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp TBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CeEEEEEEEcCCCCCCCCCeeeccC
Confidence 3468889999999999999998875
No 402
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=27.70 E-value=56 Score=32.72 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=21.9
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.++|.+.....
T Consensus 61 gg~f~l~i~fp~~YP~~pP~v~F~t~ 86 (163)
T 3rcz_B 61 GGLYKLTMAFPEEYPTRPPKCRFTPP 86 (163)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 45677889999999999999987753
No 403
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=27.57 E-value=55 Score=32.69 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=22.0
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 51 gg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (165)
T 2ucz_A 51 DGVFNAKLEFPKDYPLSPPKLTFTPS 76 (165)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcEEEEEEECCccCCCCCCEEEEeCC
Confidence 34688899999999999999988763
No 404
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=27.23 E-value=57 Score=33.25 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=21.9
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
-...+.+.++++||.+||.+.....
T Consensus 68 G~f~l~i~fp~~YP~~PP~V~F~t~ 92 (179)
T 2z5d_A 68 GVWKVRVDLPDKYPFKSPSIGFMNK 92 (179)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEeeCCCCCCCCCceEEEecC
Confidence 4578889999999999999998774
No 405
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=26.97 E-value=54 Score=26.99 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=30.2
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.+.|.-.+|.++++..+|.+.|.+.+.+.| |..
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~l--g~p 34 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETL--GTP 34 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7788888889999999999999999999999 753
No 406
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=26.97 E-value=36 Score=33.70 Aligned_cols=26 Identities=27% Similarity=0.504 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.++|.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (155)
T 1wzv_A 50 LKAFNLRISFPPEYPFKPPMIKFTTK 75 (155)
T ss_dssp GEEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCCcceeeCC
Confidence 34688899999999999999988764
No 407
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=26.92 E-value=37 Score=33.62 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=21.5
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
-...+.+.++++||.++|.+.....
T Consensus 49 g~f~~~i~fp~~YP~~PP~v~f~t~ 73 (154)
T 1c4z_D 49 GAFRIEINFPAEYPFKPPKITFKTK 73 (154)
T ss_dssp CCEEEEEECCTTTTTSCCEEEESSC
T ss_pred CeEEEEEEeCCCCCCCCCEEEEeCC
Confidence 4578899999999999999988754
No 408
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=26.69 E-value=51 Score=33.19 Aligned_cols=26 Identities=19% Similarity=0.190 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 69 gG~f~l~i~fp~~YP~~PP~V~F~T~ 94 (169)
T 1yrv_A 69 GLVFQLTIHFTSEYNYAPPVVKFITI 94 (169)
T ss_dssp TCEEEEEEECCTTBTTBCCEEEESSC
T ss_pred ceEEEEEEECCccCCCCCCcceecCC
Confidence 34688999999999999999998764
No 409
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=26.47 E-value=55 Score=33.35 Aligned_cols=26 Identities=23% Similarity=0.479 Sum_probs=22.3
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 76 gG~f~l~i~fp~~YP~~PP~V~F~T~ 101 (179)
T 1i7k_A 76 DLRYKLSLEFPSGYPYNAPTVKFLTP 101 (179)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCcCCCCCceEEEecC
Confidence 34688899999999999999998764
No 410
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=26.30 E-value=59 Score=33.56 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=22.1
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-.+.|.+.|+++||.+||.+.....
T Consensus 94 gG~f~l~i~fp~~YP~~PP~V~F~T~ 119 (194)
T 3bzh_A 94 GGVFFLDITFTPEYPFKPPKVTFRTR 119 (194)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCcCCCCCccccccCC
Confidence 34688899999999999999987654
No 411
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=26.10 E-value=58 Score=32.87 Aligned_cols=25 Identities=20% Similarity=0.219 Sum_probs=22.2
Q ss_pred cceeEEEEEeCCCCCCCCCceeecc
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITP 57 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~ 57 (1196)
.-...+.+.++++||.+||.+....
T Consensus 64 gg~f~~~i~fp~~YP~~PP~v~f~t 88 (172)
T 2y9m_A 64 NHQFRILIEVPSSYPMNPPKISFMQ 88 (172)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEECT
T ss_pred CCEEEEEEECCCcCCCCCCEEEEee
Confidence 3468899999999999999999887
No 412
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=26.03 E-value=60 Score=33.47 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 91 gG~f~l~i~fp~~YP~~PP~V~F~T~ 116 (193)
T 2f4z_A 91 GGHFTLDIVIPPDYPYNPPKMKFVTK 116 (193)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCcCCCCCCeEEEecC
Confidence 34688899999999999999998774
No 413
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=26.02 E-value=58 Score=34.20 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.=...|.+.++++||.+||.+.....
T Consensus 69 gG~f~l~i~fP~~YP~~PP~V~F~T~ 94 (216)
T 2pwq_A 69 GGHFTLAITIPNDYPYNPPKIKFVTK 94 (216)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ceEEEEEEECCCcCCCCCCcccccCC
Confidence 34688999999999999999998774
No 414
>3qc5_X Platelet binding protein GSPB; carbohydrate/sugar binding, sugar binding protein; HET: GOL; 1.40A {Streptococcus gordonii} PDB: 3qc6_X 4i8e_X* 3qd1_X*
Probab=25.94 E-value=90 Score=34.69 Aligned_cols=44 Identities=9% Similarity=0.056 Sum_probs=36.6
Q ss_pred eeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhh
Q 000993 35 SEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNA 81 (1196)
Q Consensus 35 ~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl 81 (1196)
.+.|.+.|+|.+|. +.+.+..+.+|+++|.+++++.++. ++-++
T Consensus 271 ~fklviKy~P~vP~--~KV~V~DPnnLTd~EKekVkeaVKk-ANpd~ 314 (360)
T 3qc5_X 271 QFKLIIRFRIKTPE--NTVFVNNPNQLTEVEKNLVREAVKK-SNPDL 314 (360)
T ss_dssp EEEEEEECCCCCCS--SCEEESCTTSCCHHHHHHHHHHHHH-HCTTC
T ss_pred cEEEEEecCCCCCC--cceEecCcccCCHHHHHHHHHHHHH-hCCCc
Confidence 56677789999995 7788999999999999999999876 35554
No 415
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=25.43 E-value=65 Score=26.69 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.1
Q ss_pred CceeeccCC---CCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEK---GLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~---~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.++|.-.+ +.++++..+|.+.|.+.+.+.| |..
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~l--g~p 37 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVL--NKN 37 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH--CcC
Confidence 778888777 8999999999999999999999 763
No 416
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=25.35 E-value=64 Score=32.44 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=22.1
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (169)
T 1yh2_A 50 KGVFKLEVIIPERYPFEPPQIRFLTP 75 (169)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEEeCCCCCCCCcEEEeecC
Confidence 34688899999999999999988664
No 417
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=24.66 E-value=68 Score=32.29 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=21.9
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 50 gG~f~l~i~fp~~YP~~PP~v~F~t~ 75 (169)
T 1ayz_A 50 DGTFRLLLEFDEEYPNKPPHVKFLSE 75 (169)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECcccCCCCCCccccccC
Confidence 34688899999999999999987653
No 418
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=24.49 E-value=43 Score=33.39 Aligned_cols=26 Identities=19% Similarity=0.124 Sum_probs=22.1
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 50 gg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (160)
T 1y8x_A 50 SGKFVFSFKVGQGYPHDPPKVKCETM 75 (160)
T ss_dssp TBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred CCEEEEEEeCCCcCCCCCCEEEEecC
Confidence 34678899999999999999998764
No 419
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=24.46 E-value=67 Score=32.76 Aligned_cols=26 Identities=15% Similarity=0.112 Sum_probs=21.7
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 54 gg~f~~~i~fp~~YP~~PP~v~f~t~ 79 (183)
T 3rz3_A 54 GGYFKARLKFPIDYPYSPPAFRFLTK 79 (183)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCeEEEEEECCCCCCCCCCeeEecCC
Confidence 34577888999999999999987754
No 420
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=24.25 E-value=22 Score=39.61 Aligned_cols=15 Identities=47% Similarity=0.893 Sum_probs=11.4
Q ss_pred eeeccccCCCcccccc
Q 000993 145 FIDLFSGCGESWHWGL 160 (1196)
Q Consensus 145 ~~~~~~~~~~~~~~~~ 160 (1196)
|||||||||- ++.|+
T Consensus 3 vidLFsG~GG-~~~G~ 17 (331)
T 3ubt_Y 3 LISLFSGAGG-LDLGF 17 (331)
T ss_dssp EEEESCTTCH-HHHHH
T ss_pred EEEeCcCccH-HHHHH
Confidence 7999999993 45554
No 421
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=24.14 E-value=68 Score=32.84 Aligned_cols=26 Identities=12% Similarity=0.099 Sum_probs=22.5
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 60 gG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 60 GGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCEEEEEEEcCCCCCCCCCcccccCC
Confidence 34678899999999999999998765
No 422
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=23.96 E-value=44 Score=34.06 Aligned_cols=25 Identities=20% Similarity=0.157 Sum_probs=21.5
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
-...+.+.++++||.+||.+.....
T Consensus 71 g~f~~~i~fp~~YP~~PP~v~F~t~ 95 (180)
T 2nvu_C 71 GKFVFSFKVGQGYPHDPPKVKCETM 95 (180)
T ss_dssp BCEEEEEECCTTTTTSCCEEEECSC
T ss_pred CEEEEEEeCCCcCCCCCCcCceecc
Confidence 3578889999999999999998764
No 423
>12as_A Asparagine synthetase; ligase, nitrogen fixation; HET: AMP; 2.20A {Escherichia coli K12} SCOP: d.104.1.1 PDB: 11as_A*
Probab=23.72 E-value=2.5e+02 Score=31.05 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=61.2
Q ss_pred hhHHHHHHHHHHHH-----HcCCccccccceeecCCC--cc----cccceEEEeecCCceEeecCCCcHHHH---HHH-H
Q 000993 754 LRDYVVQVTKEMFR-----QHCAKHLEIEPMYLLGDC--PQ----FKRNTVKLLTHGGDLLELSHELRLPFI---RWA-I 818 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~-----~~Gy~~I~tP~~~~~~~~--~~----~~~~my~f~D~~G~~laLRPD~T~~ia---R~~-a 818 (1196)
..+..+..+++.|. .-|+.+|..|+|...+.| +. .+.--|.+.+-.|..+ +.+-++| |+. +
T Consensus 7 ~tq~aI~~iK~~f~~~l~~~L~L~rVsaPlfv~~~~GlnD~LnG~ErpV~f~i~~~~~~~~----eivhSLaKWKR~aL~ 82 (330)
T 12as_A 7 AKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGAEKAVQVKVKALPDAQF----EVVHSLAKWKRQTLG 82 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEEECCCCSEEETTSSCSCCTTTTCCCCEECCSSSTTCCE----EECSCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEecCCEEecCCCCCCCCCCCceecceEecccCCCceE----EEeeeHHHHHHHHHH
Confidence 34556667777776 999999999998443332 21 1222333333334333 4444544 433 3
Q ss_pred hCC-CCceeEEEecCeeecCCC---CCCCcceeEeEEEEeCCCCc
Q 000993 819 SNQ-KSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGASA 859 (1196)
Q Consensus 819 ~~~-~~P~r~~Y~G~VfR~e~~---~~~~~ef~Q~GvEiiG~~~~ 859 (1196)
++. ..--.+|..-+.-|.+.. ......|.|+|.|.+.....
T Consensus 83 ~y~f~~geGlytdMnaIR~dee~ld~~HS~yvDQwDWE~vi~~~~ 127 (330)
T 12as_A 83 QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGE 127 (330)
T ss_dssp HTTCCTTCEEEEEEEEECTTCSCCCSSCCSEEEEEEEEEECCTTC
T ss_pred hCCCCCCCeeEecCcccccCcccCCCceeEEEeeeeeEEeccccc
Confidence 332 234689998999998433 22344699999999987654
No 424
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=23.71 E-value=54 Score=27.67 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=30.5
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.++|.-.++.+++++.+|.+.|.+.+.+.| |..
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~~l--g~p 35 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAAAF--DVP 35 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CCC
Confidence 7788888889999999999999999999999 754
No 425
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=23.32 E-value=55 Score=26.56 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=29.2
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGR 85 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm 85 (1196)
|.++|....+.++++..+|.+.|.+.+.+.| |-
T Consensus 2 P~i~i~~~~g~s~eqk~~l~~~lt~~l~~~l--g~ 34 (64)
T 3abf_A 2 VVLKVTLLEGRPPEKKRELVRRLTEMASRLL--GE 34 (64)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHHHT--TC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHh--CC
Confidence 7788887788999999999999999999988 64
No 426
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=23.18 E-value=72 Score=33.00 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=21.4
Q ss_pred cceeEEEEEeCCCCCCCCCceeecc
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITP 57 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~ 57 (1196)
.=...|.+.++++||.+||.+....
T Consensus 54 gg~f~~~i~fp~~YP~~pP~v~f~t 78 (201)
T 3k9o_A 54 GGRYQLEIKIPETYPFNPPKVRFIT 78 (201)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCEEEEEEECCCcCCCCCCcccccc
Confidence 3457889999999999999998876
No 427
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=23.12 E-value=75 Score=32.02 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=21.9
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.++|.+.....
T Consensus 54 gg~f~~~i~fp~~YP~~PP~v~F~t~ 79 (171)
T 1yf9_A 54 DGTWMLHVQLPSDYPFKSPSIGFCNR 79 (171)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CceEEEEEEcCCCCCCCCCeEEeecC
Confidence 34688899999999999999987653
No 428
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=22.84 E-value=72 Score=25.45 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=31.2
Q ss_pred CCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 50 CPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 50 ~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
-|.++|....+.++++..+|.+.|.+.+.+-| |.+
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~l--g~p 37 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTT--GAN 37 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 58899998889999999999999999999988 754
No 429
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=22.13 E-value=44 Score=33.50 Aligned_cols=26 Identities=12% Similarity=0.005 Sum_probs=21.6
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.++|.+.....
T Consensus 60 gg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 60 GGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp TCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred CCEEEEEEECCCCCCCCCCeeEecCC
Confidence 34577888999999999999987653
No 430
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=22.01 E-value=50 Score=33.93 Aligned_cols=26 Identities=19% Similarity=0.089 Sum_probs=21.7
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.+||.+.....
T Consensus 79 gg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 79 YGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp TCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred CCEEEEEEECCCCCCCCCceeEEecC
Confidence 34577888999999999999987654
No 431
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=21.78 E-value=76 Score=31.98 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=21.4
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
-...|.+.++++||.++|.+.....
T Consensus 86 G~f~l~i~fp~~YP~~PP~v~F~T~ 110 (170)
T 2hlw_A 86 RIYSLKIECGPKYPEAPPFVRFVTK 110 (170)
T ss_dssp CCBCEEEECCSSCTTSCCEEEECBC
T ss_pred cEEEEEEECCCCCCCCCCeeEEecc
Confidence 4577888999999999999998765
No 432
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=21.54 E-value=76 Score=31.76 Aligned_cols=26 Identities=15% Similarity=0.269 Sum_probs=22.1
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...+.+.++++||.++|.+.....
T Consensus 68 gg~f~~~i~fp~~YP~~pP~v~f~t~ 93 (167)
T 4ds2_A 68 GNTYQLSVLFSDDYPHEPPTVRFVTP 93 (167)
T ss_dssp CCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 35678889999999999999988764
No 433
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=21.30 E-value=28 Score=39.44 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=16.1
Q ss_pred CCcceecccHHHHHhhcc
Q 000993 1062 PSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1062 ~pAvGfaiglerl~~~L~ 1079 (1196)
+|.-|||+|+|||+.+|.
T Consensus 312 PPhgG~glGiDRLvmll~ 329 (345)
T 3a5y_A 312 PDCSGVALGVDRLVMLAL 329 (345)
T ss_dssp CSEEEEEEEHHHHHHHHH
T ss_pred CCCcEEEEcHHHHHHHHc
Confidence 489999999999988875
No 434
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=21.19 E-value=80 Score=33.98 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=21.8
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccC
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
.-...|.+.++++||.+||.+.....
T Consensus 106 gG~f~l~i~fp~~YP~~PP~V~F~T~ 131 (253)
T 3e46_A 106 GGRYQLEIKIPETYPFNPPKVRFITK 131 (253)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CCEEEEEEECCCCCCCCCCeeeecCC
Confidence 34588899999999999999988763
No 435
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=20.78 E-value=81 Score=27.03 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=30.8
Q ss_pred CceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCe
Q 000993 51 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 86 (1196)
Q Consensus 51 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~ 86 (1196)
|.++|.-.+|.++++..+|.+.|.+.+.+.+ |..
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~~l--g~p 35 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISEAT--GEP 35 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH--CcC
Confidence 8889988889999999999999999999999 743
No 436
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=20.25 E-value=51 Score=34.60 Aligned_cols=25 Identities=24% Similarity=0.309 Sum_probs=21.0
Q ss_pred ceeEEEEEeCCCCCCCCCceeeccC
Q 000993 34 LSEEITALCLPGYPYKCPKLQITPE 58 (1196)
Q Consensus 34 ~~~~l~~~~~~~yp~~~p~~~i~~~ 58 (1196)
=...|.+.++++||.+||.+.....
T Consensus 50 G~f~l~i~fP~~YP~~PP~V~F~T~ 74 (215)
T 1tte_A 50 GKFVVDIEVPMEYPFKPPKMQFDTK 74 (215)
T ss_dssp ECCEEEEECCSCSSSCCCEEEETTT
T ss_pred CEEEEEEeCCccCCCCCCcccccCC
Confidence 3577888999999999999988663
Done!