Your job contains 1 sequence.
>000994
METTSDWLNDISPRRPTNYHETEFTPKVMYEPAYLDIGEGITYRIPLSYDKLAPSLNLPS
FSDIQVEEFYLKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNS
PQKFSLKVSDTGNSSIPEGAAGSIQRSILSEGGILQVYYVKVLEKGETYEIIERALPKKV
KVKKDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKM
KVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKR
QQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEE
AELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPST
MPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA
EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD
AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG
TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP
FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL
NLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYK
IPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSE
TFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENHPD
RGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFI
PQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEID
SELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQ
MTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINL
TAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVSSWLKLCHLFIFSMIGNGMQID
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000994
(1196 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 1348 6.2e-201 4
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 1703 7.3e-197 3
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 1350 3.4e-193 2
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 1351 5.5e-193 2
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 1349 5.5e-193 2
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 1356 9.0e-193 2
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 1352 1.1e-192 2
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 1350 1.5e-192 2
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 1332 2.4e-190 2
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 1246 1.8e-185 3
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 1202 4.3e-176 4
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 1120 5.7e-175 3
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 1173 2.7e-174 3
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 1213 4.2e-171 2
UNIPROTKB|H0YMN5 - symbol:INO80 "DNA helicase INO80" spec... 1351 1.3e-143 2
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 783 6.0e-112 5
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 791 6.3e-112 3
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 783 1.2e-111 4
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 783 1.5e-111 4
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 783 2.3e-111 5
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 771 8.7e-110 4
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 781 1.9e-109 4
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 751 8.2e-108 2
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 775 1.7e-107 2
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 721 2.9e-102 4
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 656 4.2e-101 3
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 711 2.4e-100 2
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 723 1.3e-98 5
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 723 1.3e-98 5
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 663 1.1e-97 3
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 672 3.7e-96 2
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 575 2.4e-95 3
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 624 2.0e-94 2
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 578 4.0e-94 4
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 575 5.4e-94 4
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 624 5.6e-94 3
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation... 635 2.6e-93 3
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 601 3.8e-93 4
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 673 9.8e-93 4
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 627 1.0e-92 3
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 638 1.3e-92 3
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 568 4.0e-92 4
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 666 4.4e-92 2
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 574 6.9e-92 4
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 595 9.6e-92 3
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 576 1.0e-91 4
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 627 1.2e-91 3
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 626 2.8e-91 3
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 626 3.7e-91 3
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 626 4.3e-91 3
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 626 7.3e-91 4
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 627 7.3e-91 3
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 627 7.5e-91 3
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 627 7.5e-91 3
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 627 7.5e-91 3
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 627 7.5e-91 3
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 626 7.5e-91 4
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 626 7.6e-91 4
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 627 7.6e-91 3
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 626 8.4e-91 4
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 627 8.5e-91 3
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 627 9.6e-91 3
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 600 1.0e-90 3
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 626 1.2e-90 4
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 626 1.4e-90 4
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 566 1.5e-90 4
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 620 1.9e-90 3
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 607 7.0e-90 3
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 618 8.3e-90 3
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 613 1.2e-89 4
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 644 3.4e-89 3
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 644 3.4e-89 3
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 627 5.6e-89 3
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 567 8.4e-89 3
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 575 4.6e-88 3
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 601 5.8e-88 3
SGD|S000001934 - symbol:IRC5 "Putative ATPase containing ... 613 6.7e-88 4
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 637 7.1e-88 3
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 618 8.1e-88 2
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 564 1.2e-87 4
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 619 1.9e-87 3
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 564 1.9e-87 4
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 648 2.0e-87 3
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 564 2.4e-87 3
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 564 2.4e-87 3
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 574 3.5e-87 3
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 564 6.6e-87 4
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 561 7.2e-87 4
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,... 572 1.8e-86 3
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 624 2.1e-86 3
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 609 8.8e-86 3
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 565 1.1e-85 3
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 575 1.5e-85 3
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 574 1.5e-85 4
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 575 1.7e-85 3
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 575 2.1e-85 3
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 575 2.8e-85 3
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 575 3.7e-85 3
UNIPROTKB|E2RG62 - symbol:SMARCAD1 "Uncharacterized prote... 605 5.9e-85 2
UNIPROTKB|J9NX47 - symbol:SMARCAD1 "Uncharacterized prote... 605 5.9e-85 2
WARNING: Descriptions of 459 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 1348 (479.6 bits), Expect = 6.2e-201, Sum P(4) = 6.2e-201
Identities = 271/551 (49%), Positives = 345/551 (62%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW+ I +K+IPK +A++ A C REV+ ++ K + R R+
Sbjct: 280 KVWLTIAKKEIPKAFKQKVSARNFVLTNARKLAHQCMREVRRAAIQAQKNCKETLPRARR 339
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 340 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 399
Query: 319 MQNKSSS----QPSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K ++ E+L D + + A+ A
Sbjct: 400 MGGKQNAGGDCTQEEILRKLEDNSSQRQIDIGGGVMVNVSQEDYDSDYYKSQALKNAKEA 459
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFK 434
+ T FD E R A AA + S G + L NPS + + P +F
Sbjct: 460 YQIHQARTRLFDEEAKDSR-CASLHAASMSGSGFGE-SYSLSNPS-IQAGEDIPQPTIFN 516
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++P
Sbjct: 517 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 576
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLV 554
AS LNNW E SRF P K LPYWG +R V+RK + K LY ++A FH++ITSYQL+V
Sbjct: 577 ASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVV 636
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D KYF+RVKWQYMVLDEAQA+KSS S+RWK LL F CRNRLLLTGTPIQN MAELWALL
Sbjct: 637 QDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 696
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +EL
Sbjct: 697 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 756
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE--KKILNLMNIVIQLRKV 732
+ K E++ +C+L+SRQ+ YQA+KNKIS+ L +S G + +LMN+V+Q RKV
Sbjct: 757 SDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLVMQFRKV 816
Query: 733 CNHPELFERNE 743
CNHP+LFER E
Sbjct: 817 CNHPDLFERQE 827
Score = 516 (186.7 bits), Expect = 6.2e-201, Sum P(4) = 6.2e-201
Identities = 96/135 (71%), Positives = 118/135 (87%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
D L+TDSGKL TLD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RLDGSS
Sbjct: 1123 DKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1182
Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
I +RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAH
Sbjct: 1183 KISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1242
Query: 1167 RLGQTKDVSSWLKLC 1181
RLGQTK V+ + +C
Sbjct: 1243 RLGQTKQVTVYRLIC 1257
Score = 89 (36.4 bits), Expect = 6.2e-201, Sum P(4) = 6.2e-201
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 773 VRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGS 832
+R+P + + + L IL + HG ++ L Q + FSA+++ QS+F +
Sbjct: 828 IRSPFHMSLKPFIMSKFLFRHAIL-HTIDHGKTK-LKQTLLSPFSAQHIQQSLFHRKTDD 885
Query: 833 DASPVKSETFGFTHLMDLSPAEVA-FLAKGSFMERL 867
+AS +F F +D+SPAE++ + +G+ + L
Sbjct: 886 EAS-----SFSFLRFIDVSPAEMSNVMLQGTLVRWL 916
Score = 46 (21.3 bits), Expect = 6.5e-44, Sum P(3) = 6.5e-44
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL R L+Q N S E++ QS S+ S A S
Sbjct: 747 RIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQS--SMGSAQQAHSTTS 804
Score = 43 (20.2 bits), Expect = 6.2e-201, Sum P(4) = 6.2e-201
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVS-HQERLL---SNIKLLNATYTFIPQAQAPPINVQ 971
RS T LR+ P P L V+ ++R++ ++++ L F+ + + P+
Sbjct: 1001 RSSTRTLRQ---CQPTQPPKFLLAVTPRKDRVVCVCAHVRQLEMILLFL-EVTSVPLERY 1056
Query: 972 CSDRNFTY--RMTEEQHDPWLKR-LLIG-------FARTSENIGPRKPGGPHQLIQ 1017
C+DR+ Y R+ + K+ L G +A+ S++ P PGG L Q
Sbjct: 1057 CADRSAEYEWRLMRDGGSLIAKQCFLYGSPELACAWAQRSQSFLPPNPGGVMALQQ 1112
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 1703 (604.5 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 387/831 (46%), Positives = 517/831 (62%)
Query: 372 QNAVSKQKMLTNTFDTECSKLREAA-----DTEAAMLDVS----VAGSGNIDLHN--PST 420
Q A+ Q + T TFD + +K++ +A +T L VS V G ID+++ P
Sbjct: 1086 QKAIELQLLKTKTFDRDVNKIKNSATEGGGETIPESLAVSDKMMVDGLPMIDMNSSIPPG 1145
Query: 421 MPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
T++ P + LK YQLKG+ W+VN Y+QG+NGILADEMGLGKTIQ++A LAHLA
Sbjct: 1146 FSTADTLKQPTILNADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLA 1205
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
EEKNIWGPFL+V P S L+NW +E ++F P K +PYWG Q+R +RK NPK+LY R+
Sbjct: 1206 EEKNIWGPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRN 1265
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
+ FH+LITSY ++V DEKYF R++WQYMVLDEA AIKSS S RWKTL+SFNCRNRLLLTG
Sbjct: 1266 SPFHVLITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCRNRLLLTG 1325
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
TPIQN+MAELWALLHFIMPT FDSH++F EWFSK IE+HA G LNEHQLNRLH ILKP
Sbjct: 1326 TPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQLNRLHMILKP 1385
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
FMLRR+K+DV +E+ +KTEV V+C L+ RQ+ YQ+I++ IS+ L + + +
Sbjct: 1386 FMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSNISITELLGGA-SFSEQGSMK 1444
Query: 721 NLMNIVIQLRKVCNHPELFERNEGSS-YLYFGEI--PNSLLPPPFGELEDISFSGVRNPI 777
LMN V+Q RKVCNHPE F+R+E S +L+ + P + P S NPI
Sbjct: 1445 ALMNFVMQFRKVCNHPETFKRSECESPFLFQVQTMEPQNTTSPQCPNHLKTVRSINNNPI 1504
Query: 778 EYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPV 837
+ IPK++ +E L S I RFNIF A N+ + +SG+D
Sbjct: 1505 QVVIPKLIFREAWNP---LNSTDSDQIRTRTID-RFNIFKANNISNN----SSGND---- 1552
Query: 838 KSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNEN 897
TF F+ ++L P E+ L+ S + L F +L + + + VF +D + + +
Sbjct: 1553 ---TFSFSRFINLEPGELNKLS--SELNLLDFYLLNQATE--NEVYPVFNHLLDSD-SFD 1604
Query: 898 HPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATY 957
P +++ +LL P+ S N+L + G +DLV+ ER N ++ Y
Sbjct: 1605 QPLSNNMKS---MLLEPTFS--NVLNED-RLNNGLFNVKDLVIGGNERYQINQSVIQYVY 1658
Query: 958 TFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQ 1017
T P+ A PI+ SD++F + +Q + + I + + N G +L +
Sbjct: 1659 TLYPKVTAAPIDAMVSDKSFYIEKSTQQLNSSMDCKEISLVKLTMN-GLITNETTKELSE 1717
Query: 1018 EIDSELPVAKPALQLTY------------QIFGSCPP-MQSFDPAKLLTDSGKLQTLDIL 1064
+ + LP + + L ++FGS M SF +K L DSGKLQ LD L
Sbjct: 1718 SLPTVLPPSSNQIVLDNLKENGGLMGGLNRLFGSTSIWMPSF--SKSLNDSGKLQVLDKL 1775
Query: 1065 LKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDI 1124
LK L+ HRVL+++Q TKM+NILED+M +RKY+YLRLDGSS + DRRDMV DFQ I
Sbjct: 1776 LKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDMVDDFQSDPSI 1835
Query: 1125 FVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
F FLLSTRA G+GINLT+ADTVIFY+SDWNPT+D QA DRAHRLGQT+ V+
Sbjct: 1836 FAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRPVT 1886
Score = 194 (73.4 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 191 KEEMEKIGKVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMR 250
KE K W+ I++KD+PK + K+ A+ +RE+K+K + K +
Sbjct: 879 KEIDSKFSSNWMKIIKKDLPKACKKYSDIHMNGIANCKKIAQMMKRELKIKNQKPPKATK 938
Query: 251 GAAIRTRKLARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQ 310
IR +KL ++M +W++ D KRQQ++LNFLI
Sbjct: 939 DNQIRAKKLVKEMGAYWRKFDKDEREAKRRAEKEEANQRKREEEVQEAKRQQRKLNFLIS 998
Query: 311 QTELYSHFMQNKSSSQPS 328
QTELYSHFM +K PS
Sbjct: 999 QTELYSHFM-SKKLDDPS 1015
Score = 48 (22.0 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 96 VGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGN--SSIPEGAAGSIQRSI 148
+G P S Q ++S+S K S +S + + SS +GA+ +I SI
Sbjct: 430 IGTTSPHLSSSSNQGLPPISLSSSSKHKLSSSLSSSSSLSSSTNQGASSAISSSI 484
Score = 44 (20.5 bits), Expect = 1.9e-196, Sum P(3) = 1.9e-196
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 103 PQYESLQARLKALVASNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILS 150
P+Y S +R K S+S K S S + +SS I+ SI S
Sbjct: 746 PKYNSSSSRSKDRYGSSSSSKSSKYNSSSSSSSSRSKDNKYIRPSIFS 793
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 1350 (480.3 bits), Expect = 3.4e-193, Sum P(2) = 3.4e-193
Identities = 271/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 288 KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 347
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 348 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 407
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 408 MSRKRDMGHDGIQEEILRKLEDSSAQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 467
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 468 YHIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 523
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 524 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 583
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 584 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 643
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 644 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 703
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 704 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 763
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL--NLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 764 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRK 823
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 824 VCNHPELFERQE 835
Score = 544 (196.6 bits), Expect = 3.4e-193, Sum P(2) = 3.4e-193
Identities = 153/379 (40%), Positives = 216/379 (56%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ + + QS+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 877 FAPDYIQQSLFHRKGVNEES-----CFSFLRFIDVSPAEMANLMLQGLLARWLALFLSLK 931
Query: 876 RQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLRRK-FTIG-PGY 932
+ L + E +GE E + ++ + V L P+ S LL+ F+
Sbjct: 932 ASYRLHQLRSWGEP-EGESQEKYLRNKDFLLGVNFPLSFPNLSSCPLLKSLVFSSHCKAV 990
Query: 933 DPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSDRNFTY--RMTE 983
D V+ HQ R S+++ LL +F+ P+ A P++ C+DR+ Y R+ +
Sbjct: 991 SGYSDQVI-HQRRSATSSLRCCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLK 1049
Query: 984 EQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPP 1042
E K+ L+ G + + R+ Q E L +P Q + F P
Sbjct: 1050 EGGSLAAKQCLLNGAPELAADWLNRRS----QFFPEPAGGLWSIRP--QNGWS-FIRIPG 1102
Query: 1043 MQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRL 1102
+S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RL
Sbjct: 1103 KES-----LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRL 1157
Query: 1103 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1162
DGSS I +RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAM
Sbjct: 1158 DGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1217
Query: 1163 DRAHRLGQTKDVSSWLKLC 1181
DRAHRLGQTK V+ + +C
Sbjct: 1218 DRAHRLGQTKQVTVYRLIC 1236
Score = 42 (19.8 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 755 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQTTTS 812
Score = 37 (18.1 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WL+ LL FA
Sbjct: 855 RHGQIRVFNHSRDRWLRVLLSPFA 878
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 1351 (480.6 bits), Expect = 5.5e-193, Sum P(2) = 5.5e-193
Identities = 271/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 279 KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 338
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 339 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 398
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 399 MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 458
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 459 YHIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 514
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 515 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 574
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 575 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 634
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 635 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 694
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 695 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 754
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 755 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 814
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 815 VCNHPELFERQE 826
Score = 541 (195.5 bits), Expect = 5.5e-193, Sum P(2) = 5.5e-193
Identities = 153/390 (39%), Positives = 223/390 (57%)
Query: 805 SRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFM 864
SR+ + + + F+ + + +S+F ++ S F F +D+SPAE+A L +
Sbjct: 856 SRDRWLRVLSPFAPDYIQRSLFHRKGINEES-----CFSFLRFIDISPAEMANLMLQGLL 910
Query: 865 ERLLFAMLRWDRQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLR 923
R L L + L + A +GE ++ + ++ + V L P+ LL+
Sbjct: 911 ARWLALFLSLKASYRLHQLRSW-GAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLK 969
Query: 924 RK-FTIG-PGYDPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSD 974
F+ D VV HQ R S+++ LL +F+ P+ A P++ C+D
Sbjct: 970 SLVFSSHCKAVSGYSDQVV-HQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCND 1028
Query: 975 RNFTY--RMTEEQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQ 1031
R+ Y R+ +E K+ L+ G + + R+ Q E L +P Q
Sbjct: 1029 RSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRS----QFFPEPAGGLWSIRP--Q 1082
Query: 1032 LTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDY 1091
+ F P +S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+Y
Sbjct: 1083 NGWS-FIRIPGKES-----LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEY 1136
Query: 1092 MNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
M YRK+ Y+RLDGSS I +RRDMV DFQ+R+DIFVFLLSTRAGGLGINLTAADTVIFY+S
Sbjct: 1137 MVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDS 1196
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDVSSWLKLC 1181
DWNPT+D QAMDRAHRLGQTK V+ + +C
Sbjct: 1197 DWNPTVDQQAMDRAHRLGQTKQVTVYRLIC 1226
Score = 41 (19.5 bits), Expect = 8.9e-47, Sum P(2) = 8.9e-47
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 746 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQNTTS 803
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 1349 (479.9 bits), Expect = 5.5e-193, Sum P(2) = 5.5e-193
Identities = 272/552 (49%), Positives = 351/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++K+ A C REV+ ++ K + R R+
Sbjct: 284 KVWLSIVKKELPKAYKQKASARNLFLTNSKKLAHQCMREVRRAALQAQKNCKETLPRARR 343
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 344 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 403
Query: 319 MQNKSS----SQPSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A++A
Sbjct: 404 MSRKRDIGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNYYKAQALKNAEDA 463
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 464 YQIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 519
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 520 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 579
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+RK + K LY +DA FH++ITSYQL+
Sbjct: 580 PASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLV 639
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 640 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 699
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 700 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 759
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL--NLMNIVIQLRK 731
L+ K E++++C+ +SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 760 LSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMNLVMQFRK 819
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 820 VCNHPELFERQE 831
Score = 543 (196.2 bits), Expect = 5.5e-193, Sum P(2) = 5.5e-193
Identities = 147/378 (38%), Positives = 208/378 (55%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ +++ QS+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 873 FAPDHIQQSLFHRKGINEES-----CFSFLRFIDVSPAEMANLMNQGHLARWLALFLSLK 927
Query: 876 RQFLDGILDVFMEAMDGELNENHPDRGK--VRAVTRLLLIPSRSETNLLRRK-FTIG-PG 931
+ L +ME + ++H + K + V L P+ LL+ F+
Sbjct: 928 ASYRLHHLRSWMEPEREKQQDSHCLKNKDFLLDVNFPLSFPNLHSCTLLQNLVFSSHCKA 987
Query: 932 YDPCEDLVVSHQERLLSNIKLLNATY--TFI----PQAQAPPINVQCSDRNFTY--RMTE 983
D V+ + S ++ T +F+ P+ A P+ C+DR+ Y R
Sbjct: 988 VTGYSDHVIHRRRSATSCVRCCQVTELPSFLCIASPRVTAVPLEFYCNDRSAEYERRALR 1047
Query: 984 EQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPM 1043
E K+ L+ A ++ Q E L +P Q + F P
Sbjct: 1048 EGGSLEAKQCLVSGAPELAADWQKQSS---QFFPEYPGGLLGIRP--QNGWS-FIRIPDK 1101
Query: 1044 QSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
+S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RLD
Sbjct: 1102 ES-----LITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1156
Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
GSS I +RRDMV DFQ+R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMD
Sbjct: 1157 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1216
Query: 1164 RAHRLGQTKDVSSWLKLC 1181
RAHRLGQTK V+ + +C
Sbjct: 1217 RAHRLGQTKQVTVYRLIC 1234
Score = 38 (18.4 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQS 824
+I K V E+ EIL + L+Q N S +++ QS
Sbjct: 751 RIKKDVENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQS 795
Score = 37 (18.1 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WL+ LL FA
Sbjct: 851 RHGQIRVFNHSRDRWLRVLLSPFA 874
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 1356 (482.4 bits), Expect = 9.0e-193, Sum P(2) = 9.0e-193
Identities = 272/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 281 KVWLSIVKKELPKANKQKSSARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 340
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 341 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 400
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 401 MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 460
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA D S +G G + L NPS + + P +F
Sbjct: 461 YHIHQARTRSFDEDAKESRAAA-LRAA--DKSGSGFGESYSLANPS-IRAGEDIPQPTIF 516
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 517 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 576
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 577 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 636
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 637 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 696
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 697 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 756
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
L+ K E++ +C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 757 LSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 816
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 817 VCNHPELFERQE 828
Score = 534 (193.0 bits), Expect = 9.0e-193, Sum P(2) = 9.0e-193
Identities = 151/379 (39%), Positives = 215/379 (56%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ + + QS+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 870 FAPDYIQQSLFHRKGINEGS-----CFSFLRFIDVSPAEMANLMLQGLLARWLALFLSLK 924
Query: 876 RQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLRRK-FTIG-PGY 932
+ L + E DG ++++ ++ + V L P+ LL+ F+
Sbjct: 925 ASYRLHQLRSWAEP-DGTSHQSYLRNKDFLLGVDFPLSFPNLCSCPLLKSLVFSSHCKAV 983
Query: 933 DPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSDRNFTYR--MTE 983
D VV HQ R S+++ LL +F+ P+ A P++ C+DR+ Y + +
Sbjct: 984 SGYSDHVV-HQRRSATSSLRCCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERGVLK 1042
Query: 984 EQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPP 1042
E K+ L+ G + + R+ Q E L +P Q + F P
Sbjct: 1043 EGGSLAAKQCLLNGAPELATDWLSRRS----QFFPEPAGGLLSIRP--QNGWS-FIRIPG 1095
Query: 1043 MQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRL 1102
+S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RL
Sbjct: 1096 KES-----LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRL 1150
Query: 1103 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1162
DGSS I +RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAM
Sbjct: 1151 DGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1210
Query: 1163 DRAHRLGQTKDVSSWLKLC 1181
DRAHRLGQTK V+ + +C
Sbjct: 1211 DRAHRLGQTKQVTVYRLIC 1229
Score = 41 (19.5 bits), Expect = 5.2e-46, Sum P(2) = 5.2e-46
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 748 RIKKDVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQNTTS 805
Score = 40 (19.1 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WLK LL FA
Sbjct: 848 RHGQIRVFNHSRDRWLKVLLSPFA 871
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 1352 (481.0 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 271/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 282 KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 341
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 342 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 401
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 402 MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 461
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 462 YHIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 517
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 518 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 577
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 578 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 637
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 638 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 697
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 698 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 757
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL--NLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 758 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRK 817
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 818 VCNHPELFERQE 829
Score = 537 (194.1 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 153/380 (40%), Positives = 216/380 (56%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ + + +S+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 871 FAPDYIQESLFHRKGVNEES-----CFSFLRFIDVSPAEMANLMLQGLLARWLALFLSLK 925
Query: 876 RQFLDGILDVFMEAMDGELNENHPDRGK--VRAVTRLLLIPSRSETNLLRRK-FTIG-PG 931
+ L + E +GE N+ R K + V L P+ LL+ F+
Sbjct: 926 ASYRLHQLRSWGEP-EGE-NQQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKA 983
Query: 932 YDPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSDRNFTY--RMT 982
D V+ HQ R S+++ LL +F+ P+ A P++ C+DR+ Y R+
Sbjct: 984 VSGYSDQVI-HQRRSATSSLRCCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVL 1042
Query: 983 EEQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCP 1041
+E K+ L+ G + + R+ Q E L +P Q + F P
Sbjct: 1043 KEGGSLAAKQCLLNGAPELAADWLNRRS----QFFPEPAGGLWSIRP--QNGWS-FIRIP 1095
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
+S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+R
Sbjct: 1096 GKES-----LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMR 1150
Query: 1102 LDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQA 1161
LDGSS I +RRDMV DFQ+R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QA
Sbjct: 1151 LDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQA 1210
Query: 1162 MDRAHRLGQTKDVSSWLKLC 1181
MDRAHRLGQTK V+ + +C
Sbjct: 1211 MDRAHRLGQTKQVTVYRLIC 1230
Score = 42 (19.8 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 749 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQTTTS 806
Score = 37 (18.1 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WL+ LL FA
Sbjct: 849 RHGQIRVFNHSRDRWLRVLLSPFA 872
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 1350 (480.3 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 271/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 288 KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 347
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 348 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 407
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 408 MSRKRDMGHDGIQEEILRKLEDSSMQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 467
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 468 YHIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 523
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 524 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 583
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 584 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 643
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 644 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 703
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 704 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 763
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL--NLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 764 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRK 823
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 824 VCNHPELFERQE 835
Score = 538 (194.4 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 151/379 (39%), Positives = 216/379 (56%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ + + QS+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 877 FAPDYIQQSLFHRKGVNEES-----CFSFLRFIDVSPAEMANLMLQGLLARWLALFLSLK 931
Query: 876 RQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLRRK-FTIG-PGY 932
+ L + + +GE + + +R + V L P+ LL+ F+
Sbjct: 932 ASYRLHQLRSWGDP-EGESQQKYLRNRDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAV 990
Query: 933 DPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSDRNFTY--RMTE 983
D V+ HQ R S+++ LL +F+ P+ A P++ C+DR+ Y R+ +
Sbjct: 991 SGYSDQVI-HQRRSATSSLRCCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLK 1049
Query: 984 EQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPP 1042
E K+ L+ G + + R+ Q E L +P Q + F P
Sbjct: 1050 EGGSLAAKQCLLNGAPELAVDWLNRRS----QFFPEPAGGLWSIRP--QNGWS-FIRIPG 1102
Query: 1043 MQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRL 1102
+S L+TDSGKL LD+LL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RL
Sbjct: 1103 KES-----LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRL 1157
Query: 1103 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1162
DGSS I +RRDMV DFQ+R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAM
Sbjct: 1158 DGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1217
Query: 1163 DRAHRLGQTKDVSSWLKLC 1181
DRAHRLGQTK V+ + +C
Sbjct: 1218 DRAHRLGQTKQVTVYRLIC 1236
Score = 42 (19.8 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 755 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQTTTS 812
Score = 37 (18.1 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WL+ LL FA
Sbjct: 855 RHGQIRVFNHSRDRWLRVLLSPFA 878
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 1332 (473.9 bits), Expect = 2.4e-190, Sum P(2) = 2.4e-190
Identities = 271/552 (49%), Positives = 350/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 281 KVWLSIVKKELPKANKQKSSARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 340
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 341 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 400
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 401 MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 460
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA D S +G G + L NPS + + P +F
Sbjct: 461 YHIHQARTRSFDEDAKESRAAA-LRAA--DKSGSGFGESYSLANPS-IRAGEDIPQPTIF 516
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 517 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 576
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R +K K LY +DA FH++ITSYQL+
Sbjct: 577 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDR---KKK---KTLYTQDAPFHVVITSYQLV 630
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 631 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 690
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 691 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 750
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 751 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 810
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 811 VCNHPELFERQE 822
Score = 535 (193.4 bits), Expect = 2.4e-190, Sum P(2) = 2.4e-190
Identities = 153/379 (40%), Positives = 215/379 (56%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWD 875
F+ + + QS+F ++ S F F +D+SPAE+A L + R L L
Sbjct: 864 FAPDYIQQSLFHRKGINEGS-----CFSFLRFIDVSPAEMANLMLQGLLARWLALFLSLK 918
Query: 876 RQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLRRK-FTIG-PGY 932
+ L + E DGE ++ + ++ + V L P+ LL+ F+
Sbjct: 919 ASYRLHQLRSWGEP-DGESHQRYLRNKDFLLGVDFPLSFPNLCSCPLLKSLVFSSHCKAV 977
Query: 933 DPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSDRNFTYR--MTE 983
D VV HQ R S+++ LL +F+ P+ A P++ C+DR+ Y + +
Sbjct: 978 SGYSDQVV-HQWRSATSSLRCCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERGVLK 1036
Query: 984 EQHDPWLKRLLI-GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPP 1042
E K+ L+ G + + R+ Q E L +P Q + F P
Sbjct: 1037 EGGSLAAKQCLLNGAPELATDWLNRRS----QFFPEPAGGLLSIRP--QNGWS-FIRIPG 1089
Query: 1043 MQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRL 1102
+S L+TDSGKL LDILL RL+++ HRVL+++QMT+M+++LE+YM YRK+ Y+RL
Sbjct: 1090 KES-----LITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRL 1144
Query: 1103 DGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1162
DGSS I +RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAM
Sbjct: 1145 DGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1204
Query: 1163 DRAHRLGQTKDVSSWLKLC 1181
DRAHRLGQTK V+ + +C
Sbjct: 1205 DRAHRLGQTKQVTVYRLIC 1223
Score = 41 (19.5 bits), Expect = 4.0e-46, Sum P(2) = 4.0e-46
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+I K V E+ EIL + L+Q N S E++ QS S+ S A S
Sbjct: 742 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS--SMGSTQQAQNTTS 799
Score = 40 (19.1 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFA 998
R+ R+ D WLK LL FA
Sbjct: 842 RHGQIRVFNHSRDRWLKVLLSPFA 865
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 1246 (443.7 bits), Expect = 1.8e-185, Sum P(3) = 1.8e-185
Identities = 254/551 (46%), Positives = 337/551 (61%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
++W + +K+ + + KR A C + V+ + S ++M+ R ++
Sbjct: 312 RIWQIMSKKESGRLQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKR 371
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L R+ML +WKR + KRQQ++LNFLI QTELY+HF
Sbjct: 372 LTREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHF 431
Query: 319 MQNKSSSQPSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNAVSKQ 378
M +K Q SE D+ A+ A+ +
Sbjct: 432 M-SKKLGQGSE-----EDQLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRD 485
Query: 379 KMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLK 438
T FD K +E + E A V D+ P P + P++FKG+LK
Sbjct: 486 LDKTRAFDVFAKK-KEKEEEEQAQESVE-------DI-KPEPRPEMKDLPQPKMFKGTLK 536
Query: 439 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVL 498
YQ+KG+ WL N Y+QG++GILADEMGLGKT+Q++AFL H+AE +WGPFLV++PAS L
Sbjct: 537 GYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTL 596
Query: 499 NNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEK 558
+NW E+SRF PD K +PYWG ER +LR+ + K L+ RDA FH++ITSYQL+V+D K
Sbjct: 597 HNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYK 656
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
YF R+KWQYMVLDEAQAIKS+ S RWK LL F+CRNRLLL+GTPIQN+MAELWALLHFIM
Sbjct: 657 YFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIM 716
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
PTLFDSH++FNEWFSK IESHAE+ ++E Q++RLH ILKPFMLRR+KKDV +EL+ K
Sbjct: 717 PTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKI 776
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHL---NEKKILNLMNIVIQLRKVCNH 735
E+MV+C L+ RQ+ Y+A+K KI + L + G + NLMN+V+Q RKVCNH
Sbjct: 777 EIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNH 836
Query: 736 PELFERNEGSS 746
PELFER + S
Sbjct: 837 PELFERRDARS 847
Score = 498 (180.4 bits), Expect = 1.8e-185, Sum P(3) = 1.8e-185
Identities = 96/135 (71%), Positives = 115/135 (85%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
D L+TD+GKL LD LL RL+A HRVL+++QMTKM+++LE+YM +RK+RY+RLDGSS
Sbjct: 1147 DKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSS 1206
Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
I RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAH
Sbjct: 1207 KISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1266
Query: 1167 RLGQTKDVSSWLKLC 1181
RLGQTK V+ + +C
Sbjct: 1267 RLGQTKQVTVYRLIC 1281
Score = 93 (37.8 bits), Expect = 1.8e-185, Sum P(3) = 1.8e-185
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 778 EYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPV 837
EY IP+++H+E L +L S + L RFNIF +E + +S+F D + V
Sbjct: 855 EYTIPRLIHEEGL-IHRMLPSR------KHLLYNRFNIFKSEYIQRSLFE-----DVN-V 901
Query: 838 KSETFGFTHLMDLSPAEVAFLAKGSFMERLL 868
S FGFT L DLS ++ + ++ LL
Sbjct: 902 NS-CFGFTRLCDLSVGDMVEVTLNGLIDFLL 931
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 1202 (428.2 bits), Expect = 4.3e-176, Sum P(4) = 4.3e-176
Identities = 251/553 (45%), Positives = 329/553 (59%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
++W +I RKDIPK + ++ A+ ++ + R+ K M+ R ++
Sbjct: 569 QIWRDIARKDIPKVYRTKVNSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 628
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
R+M+ FWKR + RQ+++LNFLI QTELYSHF
Sbjct: 629 TMREMMSFWKRNEREERDLRRLAEKQELESAKRAEAEREANRQKRKLNFLISQTELYSHF 688
Query: 319 MQNKSSSQPSEVLPVG--NDKPNDQX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
+ K E G + D AQ+A
Sbjct: 689 IGRKIPGAGGESGDAGVQGTEAMDLTPGAGAKVTNFEDLDFDAEDDTALRQAAMANAQSA 748
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFK 434
V K + FD D + +D ++ NP+++ Q P +
Sbjct: 749 VQKAQERARAFD----------DPNKSTMDTM--DDSELNFQNPTSLGDIEISQ-PTMLT 795
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE NIWGPFLV+AP
Sbjct: 796 AKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAP 855
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLL 553
AS L+NW EI++F P++K LPYWG ++R +LRK + K + Y +++ FH+L+TSYQL+
Sbjct: 856 ASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLV 915
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D +YF++VKWQYM+LDEAQAIKSS S RWK+LL F+CRNRLLLTGTPIQNNM ELWAL
Sbjct: 916 VLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWAL 975
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSH++F+EWFSK IESHA+ LNE QL RLH ILKPFMLRRVKK V E
Sbjct: 976 LHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQE 1035
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVC 733
L K E V C L+ RQ+A Y ++N++S+ L + + +E LMN+V+Q RKVC
Sbjct: 1036 LGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVG-DETDSTTLMNLVMQFRKVC 1094
Query: 734 NHPELFERNEGSS 746
NHP+LFER E S
Sbjct: 1095 NHPDLFERAETKS 1107
Score = 484 (175.4 bits), Expect = 4.3e-176, Sum P(4) = 4.3e-176
Identities = 133/338 (39%), Positives = 178/338 (52%)
Query: 853 AEVA-FLAKGSFMERLLFAMLRWDRQFLD-GILDVFMEAMDGELNENHPDRGKVRAVTRL 910
AE A F K S + F+ LR F+D + + F + G RG+ ++RL
Sbjct: 1115 AETASFNIKQSIEDDGAFSFLR----FVDTSVGEAFNYSHQGVFERALRRRGQTNRLSRL 1170
Query: 911 LLIPSRSETN---LLRRKFTIGPGYD--PCEDLVVSHQERLLSNIKL-------LNATYT 958
++ E++ L F I D D+ V R L N+ LN
Sbjct: 1171 SVVYDEDESSTATLPHTLFNIVDRNDRQAVYDIAVEGHMRELMNVSRSVFEQEGLNVIEP 1230
Query: 959 FI-PQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQ 1017
P A APPI + S + + + ++ L G P K + Q
Sbjct: 1231 CAGPAASAPPITLVSSGQEALIETQDALFNVPVQHALFGT--------PSKAMEEQIIEQ 1282
Query: 1018 EIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLL 1077
++D P L G ++ + +TDSGKL LD LL+ L+A HRVLL
Sbjct: 1283 QLDPTPYSLPPMLPEPISTKGRYTHIEVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLL 1342
Query: 1078 FAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLG 1137
+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DFQ R DIFVFLLSTRAGGLG
Sbjct: 1343 YFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLG 1402
Query: 1138 INLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
INLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ V+
Sbjct: 1403 INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVT 1440
Score = 37 (18.1 bits), Expect = 4.3e-176, Sum P(4) = 4.3e-176
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 1166 HRLGQTKDVSSWL 1178
+R +TKD++ WL
Sbjct: 1483 NRDSKTKDIAMWL 1495
Score = 37 (18.1 bits), Expect = 4.3e-176, Sum P(4) = 4.3e-176
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 13 PRRPTNYHETEFTPKVMYE 31
PRR + ETE K M E
Sbjct: 285 PRRIMSEKETEMVNKYMVE 303
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 1120 (399.3 bits), Expect = 5.7e-175, Sum P(3) = 5.7e-175
Identities = 238/485 (49%), Positives = 320/485 (65%)
Query: 371 AQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
AQ AV K + + FD R+ + ++ D++ G ++ NP T+ V+ P
Sbjct: 785 AQEAVQKAREHSQLFDAN----RQQSPNNSSS-DMN---EGEMNFQNP-TLVNAFEVKQP 835
Query: 431 ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL 490
++ LKEYQLKGL WL N YEQG+NGILADEMGLGKT+Q+++ +A+LAE NIWGPFL
Sbjct: 836 KMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFL 895
Query: 491 VVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITS 549
V+APAS L+NW EI+RF P LK +PYWG ++R +LRK K + Y ++ FH+++TS
Sbjct: 896 VIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTS 955
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
YQL+V D +YF+ VKWQYM+LDEAQAIKSS+S RWK+LL+F CRNRLLLTGTPIQN M E
Sbjct: 956 YQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQE 1015
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKD 669
LWALLHFIMP+LFDSH +F+EWFSK IESHA+ LNE QL RLH ILKPFMLRRVKK+
Sbjct: 1016 LWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKN 1075
Query: 670 VISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS-RGHLNEKKILNLMNIVIQ 728
V SEL K E V+C L+ RQ+ YQA++ +IS+A L + + G + + ++MN+V+Q
Sbjct: 1076 VQSELGEKIEKEVYCDLTQRQKILYQALRRQISIAELLEKAILG--GDDTVASIMNLVMQ 1133
Query: 729 LRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQE 788
RKVCNHP+LFER + S L S+ G D+ ++ RN I + IP++++++
Sbjct: 1134 FRKVCNHPDLFEREDVRSPLSLATWSKSIYINREGNFLDVPYN-TRNFITFSIPRLLYEQ 1192
Query: 789 ILQSSEILCSAVGHGISRELFQKR-FNIFSAENVYQSIFSLASGSDASPVKSETFGFTHL 847
IL S G SR K +N+ + N + S+ S + SP F +
Sbjct: 1193 ----GGIL-SVPGLNTSRGFETKYLYNLMNIWNPEYTNDSIKSNPEGSP-----FSWLRF 1242
Query: 848 MDLSP 852
+D SP
Sbjct: 1243 VDESP 1247
Score = 489 (177.2 bits), Expect = 5.7e-175, Sum P(3) = 5.7e-175
Identities = 119/275 (43%), Positives = 170/275 (61%)
Query: 907 VTRLLLIP-SRSETNLLRRKFTI-GPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQ 964
V ++LL+P S ++ ++L F P Y V+ + L ++ LL++ + +A
Sbjct: 1290 VRKMLLLPKSITKVDVLGSDFKEDSPFYHLTH--VLEESDSQL-DLTLLDSV--LVQRAS 1344
Query: 965 APPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLI--QEIDS 1021
APPI++ C R FT + Q D L P K G LI + S
Sbjct: 1345 APPIDIYCPGSRQFTVLQSRFQRDHLWSHYLYQ---------PLK--GEEDLIINNQAVS 1393
Query: 1022 ELPVAKPALQLTYQIF-GSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQ 1080
+LP+ + L ++ I GS ++ + + DSGKL LD LL L+A +HRVL++ Q
Sbjct: 1394 KLPIPRKPLLPSFGIAKGSYSNVRIPSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQ 1453
Query: 1081 MTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINL 1140
MT+M++++E+Y+ +R+Y+YLRLDGSS I RRDMV ++Q R ++FVFLLSTRAGGLGINL
Sbjct: 1454 MTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINL 1513
Query: 1141 TAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
TAADTVIFY+SDWNP++D QAMDRAHR+GQ K V+
Sbjct: 1514 TAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVT 1548
Score = 140 (54.3 bits), Expect = 5.7e-175, Sum P(3) = 5.7e-175
Identities = 34/134 (25%), Positives = 62/134 (46%)
Query: 190 EKEEMEKIGK-VWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKL 248
+K+ +E + + V I RK+IP+ +A++ ++ C RE + R++K
Sbjct: 615 KKKTVETLQQQVIKEIARKEIPRVYKIIQQNQYNRSTNARKTSQLCGREARRWQFRTIKN 674
Query: 249 MRGAAIRTRKLARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFL 308
+ + ++ R+ ++FWKR + +RQ ++L+FL
Sbjct: 675 NKDMQTKAKRAMRETMVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQARKLDFL 734
Query: 309 IQQTELYSHFMQNK 322
I QTELYSHF+ K
Sbjct: 735 ITQTELYSHFVGRK 748
Score = 54 (24.1 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 392 LREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQT 429
L+E+AD +A M + S A S N DL + ++ S+ +T
Sbjct: 420 LQESADKDAEMNEASTATSENEDLKDDLSLADLSSKKT 457
Score = 46 (21.3 bits), Expect = 4.6e-165, Sum P(3) = 4.6e-165
Identities = 18/98 (18%), Positives = 42/98 (42%)
Query: 81 AAMMANDKRFGPRSRVGMGEPRPQYESLQARLKA-LVASNSPQKFSLKVSDTGNSSIPEG 139
A+ +AND + + ++ +A+ +A + +K S ++TGNS+ E
Sbjct: 539 ASKLANDTSKNANGETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNSTNKEA 598
Query: 140 AAGSIQRSILSEGGILQVYYVKVLEKGETYEIIERALP 177
+ + + + + V+ L++ EI + +P
Sbjct: 599 STEDTKANATASAPNKKKKTVETLQQQVIKEIARKEIP 636
Score = 39 (18.8 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 895 NENHPDRGKVRAVTRLLLIPSRSETNLLRRKFT 927
N N P + KV+A ++ + S+++++ R K +
Sbjct: 465 NNNTPSKAKVKAESK---VRSKAKSDKSRAKLS 494
Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 143 SIQRSILSEGGILQV 157
SI R + +GGIL V
Sbjct: 1184 SIPRLLYEQGGILSV 1198
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 1173 (418.0 bits), Expect = 2.7e-174, Sum P(3) = 2.7e-174
Identities = 251/570 (44%), Positives = 333/570 (58%)
Query: 200 VWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
+W ++ RKD K + ++ + C RE K S++ K ++ R R+
Sbjct: 476 IWKDMARKDSTKMSRLVQQIQSIRSTNFRKTSSLCAREAKKWQSKNFKQIKDFQTRARRG 535
Query: 260 ARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHFM 319
R+M FWK+ + KRQ ++LNFL+ QTELYSHF+
Sbjct: 536 IREMSNFWKKNEREERDLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSHFI 595
Query: 320 QNKSSSQPSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNAVSKQK 379
K + E GN+ ++ Q + +
Sbjct: 596 GRKIKTNELE----GNNVSSNDSESQKNIDISALAPNKNDFHAIDFDNENDEQLRLRAAE 651
Query: 380 MLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKE 439
+N +K ++ D A + ++ NP+++ T++ P++ +LKE
Sbjct: 652 NASNALAETRAKAKQFDDHANAHEEEEE--EDELNFQNPTSLGEI-TIEQPKILACTLKE 708
Query: 440 YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLN 499
YQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLAE NIWGPFLVV PAS L+
Sbjct: 709 YQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLH 768
Query: 500 NWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLLVADEK 558
NW +EIS+F P K LPYWG +R VLRK + K L Y ++A FH+++TSYQ++V D
Sbjct: 769 NWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDAN 828
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
Y +++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRLLLTGTPIQN+M ELWALLHFIM
Sbjct: 829 YLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIM 888
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P+LFDSH++FNEWFSK IESHAE LN+ QL RLH ILKPFMLRRVKK+V SEL K
Sbjct: 889 PSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKI 948
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISL-------AGLFDN-SRGHLNEKKILNLMNIVIQLR 730
E+ V C L+ RQ YQ +K++IS A D+ S N NL+N V+Q R
Sbjct: 949 EIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFR 1008
Query: 731 KVCNHPELFERNEGSS---YLYFGEIPNSL 757
KVCNHP+LFER + S + FG+ + L
Sbjct: 1009 KVCNHPDLFERADVDSPFSFTTFGKTTSML 1038
Score = 481 (174.4 bits), Expect = 2.7e-174, Sum P(3) = 2.7e-174
Identities = 104/217 (47%), Positives = 143/217 (65%)
Query: 961 PQAQAPPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGF-ARTSENIGPRKPGGPHQLIQE 1018
P APP+ ++ + T + E DP + + L A T N+ +K G P +++
Sbjct: 1212 PNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKK-GIP---VED 1267
Query: 1019 IDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLF 1078
+P L + S P M F +T+S KL+ LD LL +L++E HRVL++
Sbjct: 1268 FPKTGLFPEP-LNKNFSSNISMPSMDRF-----ITESAKLRKLDELLVKLKSEGHRVLIY 1321
Query: 1079 AQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGI 1138
QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q +IFVFLLSTRAGGLGI
Sbjct: 1322 FQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGI 1381
Query: 1139 NLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
NLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ V+
Sbjct: 1382 NLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVT 1418
Score = 77 (32.2 bits), Expect = 2.7e-174, Sum P(3) = 2.7e-174
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 763 GELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVY 822
G+ D+ +S RNPI+Y +P++++++++ + + V I+ +L +FNIF+ Y
Sbjct: 1068 GKFTDLIYSS-RNPIKYSLPRLIYEDLILPN--YNNDVD--IANKLKNVKFNIFNPSTNY 1122
Query: 823 QSIFSLASGSDASPVKSETF 842
+ L S P +E F
Sbjct: 1123 ELCLFL-SKLTGEPSLNEFF 1141
Score = 39 (18.8 bits), Expect = 5.2e-43, Sum P(3) = 5.2e-43
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 434 KGSLKEYQLKGLQWLVN 450
K +LK+Y +K L+ L+N
Sbjct: 374 KITLKQYHVKRLKKLIN 390
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 1213 (432.1 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 256/627 (40%), Positives = 374/627 (59%)
Query: 200 VWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
+W ++ RKD PK I+ ++ A RE K ++ K + + R+
Sbjct: 438 IWKDLSRKDGPKGSRSMQQATQGRLINLRKTALLAAREAKRWQLKNTKNQKDLTTKARRA 497
Query: 260 ARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHFM 319
R+M FWKR + KRQ ++LNFLI QTELYSHF+
Sbjct: 498 MREMFNFWKRNERLERDLKKKHEKELLDKAKKEEEEREAKRQSRKLNFLITQTELYSHFI 557
Query: 320 QNKSSSQPSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNAVSKQK 379
K + E ++ ++ A ++ Q
Sbjct: 558 GKKIKTDELEGTNADDNLKSNTKEHLDKYADVDGSATHDINAVDFDNDDEEALRRMAAQN 617
Query: 380 MLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKE 439
+ + +K ++ ++E + + G ++ NP T+ T+ P + K +LKE
Sbjct: 618 AQNALIEVQ-NKAKQFDNSEESFKNPDTNGE-EMNFQNP-TLLGDITIPQPNMLKCTLKE 674
Query: 440 YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLN 499
YQLKGL WL N YEQG+NGILADEMGLGKT+Q+++ LA+LAE N+WGPFLVV PAS L+
Sbjct: 675 YQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPASTLH 734
Query: 500 NWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLLVADEK 558
NW EI++F P+ K LPYWG ++R +LRK + K L Y +D+ FH+L+TSYQL+VAD
Sbjct: 735 NWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTSYQLIVADIA 794
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
YF+++KWQYM+LDEAQAIKSS+S RWK+LL+ CRNRLLLTGTPIQN+M ELWALLHFIM
Sbjct: 795 YFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIM 854
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P++FDSH++F++WF+K IESHA+ +L+E QL RLH ILKPFMLRR+KK+V SEL K
Sbjct: 855 PSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKNVQSELGDKV 914
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAG--LFDNSRGHLNEKKILNLMNIVIQLRKVCNHP 736
E+ V+C L++RQ+ YQ ++++IS++ L + + +L N+V+Q RKVCNHP
Sbjct: 915 EIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNSTSSDS--SLANLVMQFRKVCNHP 972
Query: 737 ELFERNEGSSYLYFGEIPN--SLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSE 794
+LFER + +S FG+ S L EL D+++S N ++Y +P++++ E+L +
Sbjct: 973 DLFERADVNSPFSFGKFAETGSFLRET-NEL-DVNYS-TENIVQYDLPRLIYDELLTPNY 1029
Query: 795 ILCSAVGHGISRELFQKRFNIFSAENV 821
+ +R+ +F+I++ EN+
Sbjct: 1030 -------NKSTRDSIYSKFSIYNPENM 1049
Score = 472 (171.2 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 106/239 (44%), Positives = 152/239 (63%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFA 998
+VS +E++ ++ L P A APPI V CS NFT +M D ++ LI +
Sbjct: 1131 LVSIKEKVSQDMYLNKLEPAVTPIASAPPITVNCSSMNFTNKMNNTLFDSNIRSSLIPLS 1190
Query: 999 RTSENIGPRKPGGPHQLIQEIDSELPVAK-P-ALQLTYQIFG-SCPPMQSFDPAKLLTDS 1055
++E ++ + ++P+ + P + L IF S M S D + + +S
Sbjct: 1191 LSTE-------------LKLMKDQIPLEQYPKSNMLPMPIFDYSNIRMPSMD--RFIAES 1235
Query: 1056 GKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV 1115
GKL LD LL L+ HR+L++ QMT+M+ I E+Y+ Y+ Y+Y+RLDGS+TI RR+MV
Sbjct: 1236 GKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMV 1295
Query: 1116 RDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+ +Q +IF+F+LSTRAGGLG+NLT+ADTVIFY+SDWNPT+D QAMDRAHR+GQTK V
Sbjct: 1296 QAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQV 1354
Score = 47 (21.6 bits), Expect = 4.7e-40, Sum P(2) = 4.7e-40
Identities = 39/145 (26%), Positives = 60/145 (41%)
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTL---NEHQLNRLHAILKPFMLRRVKKDVISELT 675
P LF+ + N FS G AE G L NE +N + + L R+ D + LT
Sbjct: 972 PDLFERAD-VNSPFSFG--KFAETGSFLRETNELDVNYSTENIVQYDLPRLIYDEL--LT 1026
Query: 676 TKTEVMVHCKLSSRQQAFYQAIKNKIS-LAGL--FDNSRGHLNEKKILNLMNIVIQLRKV 732
+ S+ + N L G+ N H ++K IL+ I+++
Sbjct: 1027 PNYNKSTRDSIYSKFSIYNPENMNATGWLQGINVSPNELKHYSQKDILSR---AIEMQ-- 1081
Query: 733 CNHPELFERNEGSSYLYFGE-IPNS 756
N P E+ E +YLY G+ IP +
Sbjct: 1082 -NKPTETEKLERINYLYEGDYIPKN 1105
Score = 42 (19.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 415 LHNPSTMPVTSTVQTPELFKGSLKEYQLKGL 445
++NP M T +Q + LK Y K +
Sbjct: 1043 IYNPENMNATGWLQGINVSPNELKHYSQKDI 1073
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 1351 (480.6 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 271/552 (49%), Positives = 352/552 (63%)
Query: 199 KVWVNIVRKDIPKYXXXXXXXXXXXXIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
KVW++IV+K++PK ++++ A C +EV+ ++ K + R R+
Sbjct: 279 KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 338
Query: 259 LARDMLLFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYSHF 318
L ++MLL+WK+ + KRQQ++LNFLI QTELY+HF
Sbjct: 339 LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 398
Query: 319 MQNKSSSQ----PSEVLPVGNDKPNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNA 374
M K E+L D + A+NA
Sbjct: 399 MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 458
Query: 375 VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
+ T +FD + + R AA AA + S G G + L NPS + + P +F
Sbjct: 459 YHIHQARTRSFDEDAKESRAAA-LRAA--NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 514
Query: 434 KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 515 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 574
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
PAS LNNW E +RF P K LPYWG +R V+R+ + K LY +DA FH++ITSYQL+
Sbjct: 575 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 634
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 635 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 694
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMPTLFDSHE+FNEWFSK IESHAE+ ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 695 LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 754
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
L+ K E++++C+L+SRQ+ YQA+KNKIS+ L +S G + + +LMN+V+Q RK
Sbjct: 755 LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 814
Query: 732 VCNHPELFERNE 743
VCNHPELFER E
Sbjct: 815 VCNHPELFERQE 826
Score = 74 (31.1 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 805 SRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFM 864
SR+ + + + F+ + + +S+F ++ S F F +D+SPAE+A L +
Sbjct: 856 SRDRWLRVLSPFAPDYIQRSLFHRKGINEES-----CFSFLRFIDISPAEMANLMLQGLL 910
Query: 865 ERLLFAMLRWDRQFLDGILDVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETNLLR 923
R L L + L + A +GE ++ + ++ + V L P+ LL+
Sbjct: 911 ARWLALFLSLKASYRLHQLRSW-GAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLK 969
Query: 924 RK-FTIG-PGYDPCEDLVVSHQER-LLSNIK--LLNATYTFI----PQAQAPPINVQCSD 974
F+ D VV HQ R S+++ LL +F+ P+ A P++ C+D
Sbjct: 970 SLVFSSHCKAVSGYSDQVV-HQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCND 1028
Query: 975 RNFTY--RMTEEQHDPWLKRLLIGFA 998
R+ Y R+ +E K+ L+ A
Sbjct: 1029 RSAEYERRVLKEGGSLAAKQCLLNGA 1054
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 783 (280.7 bits), Expect = 6.0e-112, Sum P(5) = 6.0e-112
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 610 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 669
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 670 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 723
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 724 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 783
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 784 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 843
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 844 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 896
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 897 VINILMQLRKVCNHPNLFD 915
Score = 408 (148.7 bits), Expect = 6.0e-112, Sum P(5) = 6.0e-112
Identities = 82/172 (47%), Positives = 115/172 (66%)
Query: 1004 IGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLD 1062
+ PR+ QL E+ P A+P ++ C F +L+ D GKLQTL
Sbjct: 1999 LAPRQAAFQEQLACEL---WPRARPLHRIV------CNMRTQFPDLRLIQYDCGKLQTLA 2049
Query: 1063 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRS 1122
+LL++L+AE HRVL+F QMT+ML++LE ++ Y + YLRLDGS+ + R+ ++ F
Sbjct: 2050 VLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADK 2109
Query: 1123 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
IF F+LSTR+GG+G+NLT ADTV+FY+SDWNPT+D QA DR HR+GQT+DV
Sbjct: 2110 RIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Score = 48 (22.0 bits), Expect = 6.0e-112, Sum P(5) = 6.0e-112
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 827 SLASGSDASPVKSETFGFTHLMDL--SPAEVAFLAKG 861
SL +GS P ++T T L +PA+ LA G
Sbjct: 1698 SLGTGSPQGPFPAQTLSLTPASSLVPAPAQTLSLAPG 1734
Score = 47 (21.6 bits), Expect = 6.0e-112, Sum P(5) = 6.0e-112
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
Score = 42 (19.8 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 729 LRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIE 778
L + N P L GSS S PPP ++D + G P E
Sbjct: 247 LSQSLNQP-LASSKAGSSPCLGSSSAASSPPPPVSRMDDEAIDGDFQPQE 295
Score = 40 (19.1 bits), Expect = 6.0e-112, Sum P(5) = 6.0e-112
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 1004 IGPRKPGGPH 1013
IGPR PG H
Sbjct: 1936 IGPRSPGPSH 1945
Score = 40 (19.1 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 394 EAADTEAAMLDVSVAGSGNIDLHNPSTMPVT 424
+A ++A+ L VS +G+ + + S +PV+
Sbjct: 1814 QAPASQASSLGVSASGAAPLPVTMVSRLPVS 1844
Score = 38 (18.4 bits), Expect = 1.3e-29, Sum P(5) = 1.3e-29
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 400 AAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
+A L VS +G + P+ PV S P
Sbjct: 1468 SAPLPVSASGPALLTSVTPTLAPVVSAATGP 1498
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 791 (283.5 bits), Expect = 6.3e-112, Sum P(3) = 6.3e-112
Identities = 153/319 (47%), Positives = 210/319 (65%)
Query: 424 TSTVQT--PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
TS V+T P L K L+EYQ GL WLV+ YE+ LNGILADEMGLGKTI ++ +A+LA
Sbjct: 766 TSNVRTKVPFLLKFPLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAV 825
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
+K +WGP L+V P+SVL NW E R+CP LK Y G ++R RK + +
Sbjct: 826 QKGVWGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANRKG------WSKSN 879
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY ++++D FRR KW YM+LDEA IK+ + RW+ +L FN RLLLTGT
Sbjct: 880 AFHVCITSYSMVMSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGT 939
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ ELW+L+HF+MP +F SH +F +WFS + E G +NE +NRLHA+L+PF
Sbjct: 940 PLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNEDIINRLHAVLRPF 999
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRR+KKDV ++ K +V C +S RQ+ Y+ N S ++ L+ +
Sbjct: 1000 LLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSS-------TQSTLSSGSFFS 1052
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP+LFE
Sbjct: 1053 IINILMQLRKVCNHPDLFE 1071
Score = 399 (145.5 bits), Expect = 6.3e-112, Sum P(3) = 6.3e-112
Identities = 88/186 (47%), Positives = 123/186 (66%)
Query: 994 LIGFARTSENIGPRKPGG-PHQLIQEIDSELPVAKPALQLTYQIF-GSCPPMQSFDPAKL 1051
LI AR +E I + G P +L++E +E+ + + ++ F S M+ + P K
Sbjct: 1314 LISTAR-AEPITLLQYGASPSKLLEEHRNEVLLINGLSKSSFDAFYPSYQRMKLYFPDKR 1372
Query: 1052 LT--DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
L D GKLQ L ILL+RL+ + HR L+F QMTKML+I E ++N Y YLRLDGS+ I
Sbjct: 1373 LIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKID 1432
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F IF+F+LSTR+GGLG+NLT ADTVIFY++DWNP++D QA DR HR+G
Sbjct: 1433 KRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIG 1492
Query: 1170 QTKDVS 1175
QT++V+
Sbjct: 1493 QTREVN 1498
Score = 47 (21.6 bits), Expect = 6.3e-112, Sum P(3) = 6.3e-112
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 912 LIPSRSETNLLRRKFTIG-PG-Y----DPCEDLVVSHQERLLSNIKLLNATYTF-IPQAQ 964
LI S T+ +R FTI P Y + DL+++ +R S IK++ +TF I A+
Sbjct: 1261 LIESVKITDPIRDWFTISKPSNYMSYSNYLVDLIMTPIQRQQSMIKIIE-NFTFLISTAR 1319
Query: 965 APPINV 970
A PI +
Sbjct: 1320 AEPITL 1325
Score = 39 (18.8 bits), Expect = 6.4e-74, Sum P(2) = 6.4e-74
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 961 PQAQAPPINVQCSDRNFTYRMTEEQ 985
PQ Q PP + FT + +Q
Sbjct: 2635 PQQQQPPQQIPQQQLQFTQSIQSQQ 2659
Score = 38 (18.4 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 300 RQQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPNDQ 341
+QQQ+ QQ +L +Q + Q + N+ N Q
Sbjct: 1157 QQQQQQQLQQQQQQLQQQQLQQQQFQQQFQQQNYNNNNFNQQ 1198
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 783 (280.7 bits), Expect = 1.2e-111, Sum P(4) = 1.2e-111
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 611 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 670
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 671 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 724
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 725 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 784
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 785 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 844
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 845 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 897
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 898 VINILMQLRKVCNHPNLFD 916
Score = 412 (150.1 bits), Expect = 1.2e-111, Sum P(4) = 1.2e-111
Identities = 82/172 (47%), Positives = 116/172 (67%)
Query: 1004 IGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLD 1062
+ PR+ QL +E+ P A+P ++ C F +L+ D GKLQTL
Sbjct: 2010 LAPRQAAFQEQLAREL---WPRARPLHRIV------CNMRTQFPDLRLIQYDCGKLQTLA 2060
Query: 1063 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRS 1122
+LL++L+AE HRVL+F QMT+ML++LE ++ Y + YLRLDGS+ + R+ ++ F
Sbjct: 2061 VLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADK 2120
Query: 1123 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
IF F+LSTR+GG+G+NLT ADTV+FY+SDWNPT+D QA DR HR+GQT+DV
Sbjct: 2121 RIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2172
Score = 47 (21.6 bits), Expect = 1.2e-111, Sum P(4) = 1.2e-111
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
Score = 40 (19.1 bits), Expect = 1.2e-111, Sum P(4) = 1.2e-111
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 1004 IGPRKPGGPH 1013
IGPR PG H
Sbjct: 1947 IGPRSPGPSH 1956
Score = 40 (19.1 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 729 LRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIE 778
L + N P L GSS S PPP ++D + G P E
Sbjct: 247 LSQSLNQP-LASSKAGSSPCLGSSSAASSPPPPGSRMDDEAIDGDFQPQE 295
Score = 39 (18.8 bits), Expect = 6.9e-73, Sum P(3) = 6.9e-73
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 928 IGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQC---SDRNFTYRMTEE 984
+GP + C + S + L+ + T +P P+ V+ S++N + +T
Sbjct: 2559 LGPEAELCAQAMASTESLELAMASSETSPITLVPPKDLLPVAVEILPVSEKNLS--LTSS 2616
Query: 985 QHDPWL 990
P L
Sbjct: 2617 APSPTL 2622
Score = 37 (18.1 bits), Expect = 8.6e-30, Sum P(4) = 8.6e-30
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 417 NPSTMPVTSTVQTP 430
+P PV+STV P
Sbjct: 1429 SPLASPVSSTVSVP 1442
Score = 37 (18.1 bits), Expect = 9.1e-29, Sum P(4) = 9.1e-29
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 12 SPRRPTNYHETEFTPKVMYEPAYLDIGEGITYRIPLSYDKLA-PSLNL 58
+PR P++ TP+ P L T R P+ L P L L
Sbjct: 1338 APRPPSSGLPAVLTPRPTLPPGRLPTPSLGTARAPIPTSTLVRPLLKL 1385
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 783 (280.7 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 603 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 662
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 663 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 716
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 717 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 776
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 777 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 836
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 837 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 889
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 890 VINILMQLRKVCNHPNLFD 908
Score = 411 (149.7 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 82/172 (47%), Positives = 115/172 (66%)
Query: 1004 IGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLD 1062
+ PR+ QL E+ P A+P ++ C F +L+ D GKLQTL
Sbjct: 1999 LAPRQAAFQEQLASEL---WPRARPLHRIV------CNMRTQFPDLRLIQYDCGKLQTLA 2049
Query: 1063 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRS 1122
+LL++L+AE HRVL+F QMT+ML++LE ++ Y + YLRLDGS+ + R+ ++ F
Sbjct: 2050 VLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADK 2109
Query: 1123 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
IF F+LSTR+GG+G+NLT ADTV+FY+SDWNPT+D QA DR HR+GQT+DV
Sbjct: 2110 RIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Score = 47 (21.6 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
Score = 40 (19.1 bits), Expect = 1.5e-111, Sum P(4) = 1.5e-111
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 1004 IGPRKPGGPH 1013
IGPR PG H
Sbjct: 1936 IGPRSPGPSH 1945
Score = 37 (18.1 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 417 NPSTMPVTSTVQTP 430
+P PV+STV P
Sbjct: 1421 SPLASPVSSTVSVP 1434
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 783 (280.7 bits), Expect = 2.3e-111, Sum P(5) = 2.3e-111
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 613 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 672
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 673 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 726
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 727 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 786
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 787 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 846
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 847 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 899
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 900 VINILMQLRKVCNHPNLFD 918
Score = 404 (147.3 bits), Expect = 2.3e-111, Sum P(5) = 2.3e-111
Identities = 82/168 (48%), Positives = 116/168 (69%)
Query: 1012 PHQLI--QEIDSEL-PVAKPALQLTYQIFGSCPPMQSFDPAKLLT-D-SGKLQTLDILLK 1066
PHQ +++ EL P A+P ++ C F +L+ D +GKLQTL +LL+
Sbjct: 1988 PHQAAFQEQLACELWPRARPLHRIV------CNMRTQFPDLRLIQYDCAGKLQTLAVLLR 2041
Query: 1067 RLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFV 1126
+L+AE HRVL+F QMT+ML++LE ++ Y + YLRLDGS+ + R+ ++ F IF
Sbjct: 2042 QLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFC 2101
Query: 1127 FLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
F+LSTR+GG+G+NLT ADTV+FY+SDWNPT+D QA DR HR+GQT+DV
Sbjct: 2102 FILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2149
Score = 47 (21.6 bits), Expect = 2.3e-111, Sum P(5) = 2.3e-111
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
Score = 45 (20.9 bits), Expect = 2.3e-111, Sum P(5) = 2.3e-111
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 827 SLASGSDASPVKSETFGFTHLMDL--SPAEVAFLAKG 861
SL +GS P +T T L +PA+ LA G
Sbjct: 1693 SLGTGSPQGPFPIQTLSLTPASSLVPTPAQTLSLAPG 1729
Score = 44 (20.5 bits), Expect = 1.4e-29, Sum P(4) = 1.4e-29
Identities = 16/50 (32%), Positives = 19/50 (38%)
Query: 729 LRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIE 778
L + N P L GSS S PPP L+D + G P E
Sbjct: 247 LSQSLNQP-LASSKAGSSPCLGSSSAASSPPPPVSRLDDEAIDGDFQPQE 295
Score = 41 (19.5 bits), Expect = 2.3e-111, Sum P(5) = 2.3e-111
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 1004 IGPRKPGGPHQL 1015
IGPR PG H +
Sbjct: 1923 IGPRSPGPSHPI 1934
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 771 (276.5 bits), Expect = 8.7e-110, Sum P(4) = 8.7e-110
Identities = 157/343 (45%), Positives = 221/343 (64%)
Query: 399 EAAMLDVSVAGSGNIDLHNPSTMPVTSTVQ-TPELFKGSLKEYQLKGLQWLVNCYEQGLN 457
+AA L S+ GN T+ T+ V P L K SL+EYQ GL WLV E+ LN
Sbjct: 882 DAAALAESLQPKGN-------TLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLN 934
Query: 458 GILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPY 517
GILADEMGLGKTIQ +A LAHLA K WGP L+V P+SV+ NW E ++CP K L Y
Sbjct: 935 GILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTY 994
Query: 518 WGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIK 577
+G +ER + R + + FH+ ITSY+L+V D++ FRR KW+Y++LDEAQ IK
Sbjct: 995 YGSQKERKLKRVG------WTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIK 1048
Query: 578 SSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIE 637
+ S RW+ LL+F+ RLLLTGTP+QN++ ELW+L+HF+MP +F SH +F EWFS +
Sbjct: 1049 NFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMT 1108
Query: 638 SHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
E NE + RLH +++PF+LRR+KK+V ++ K E ++ C+LS+RQ+ Y+
Sbjct: 1109 GMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDF 1168
Query: 698 KNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
++ +R L +L+++N+++QLRKVCNHP +FE
Sbjct: 1169 MSRAK-------TRETLQTGNLLSVINVLMQLRKVCNHPNMFE 1204
Score = 410 (149.4 bits), Expect = 8.7e-110, Sum P(4) = 8.7e-110
Identities = 82/159 (51%), Positives = 110/159 (69%)
Query: 1017 QEIDSELPVA-KPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRV 1075
Q I++ + A +P L L + I DP + D GKLQT+D LL++L+ HRV
Sbjct: 1619 QRIENIVDQALRPKLALLHPIISEMTTKFP-DPRLIQYDCGKLQTMDRLLRQLKVNGHRV 1677
Query: 1076 LLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGG 1135
L+F QMTKML++LE ++NY + YLRLDGS+ + R+ ++ F IF F+LSTR+GG
Sbjct: 1678 LIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGG 1737
Query: 1136 LGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+GINLT ADTVIFY+SDWNPT+D QA DR HR+GQT+DV
Sbjct: 1738 VGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDV 1776
Score = 47 (21.6 bits), Expect = 8.7e-110, Sum P(4) = 8.7e-110
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 299 KRQQ---QRLNFLIQQTELYSHFM---QNKS-SSQPS 328
KR+Q Q L+F++ QTE +S + NKS + PS
Sbjct: 607 KRKQALDQHLSFIVDQTEKFSQQLVEGMNKSVADTPS 643
Score = 40 (19.1 bits), Expect = 8.7e-110, Sum P(4) = 8.7e-110
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 25 TPKVMYE---PAYLDIGEGITYRIPLSYDKLAPSLNLPSFS-DIQVEEFYLK 72
TP +Y PA L G+T P S L+P+L S + + +EF K
Sbjct: 431 TPTPLYTGNGPAALGGSGGLTPGTPTSGSLLSPALGGGSGTPNSAAQEFSFK 482
Score = 40 (19.1 bits), Expect = 4.3e-71, Sum P(4) = 4.3e-71
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 772 GVRNPIEYKIPKIVHQEILQSSE 794
G+ P ++ K+V ++IL SE
Sbjct: 3174 GISQPTTQQVRKLVQKKILIRSE 3196
Score = 40 (19.1 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 78 GSLAAMMANDKRFGPRSRVGMGEPRPQYESLQ 109
G+L+ +++N K G RS++ P +++Q
Sbjct: 1374 GALS-VLSNSKLLGARSQINAPTPAKVAKTMQ 1404
Score = 38 (18.4 bits), Expect = 1.4e-109, Sum P(4) = 1.4e-109
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 114 ALVASNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILSEGGI 154
A A+ QK++ + +D+ SS+ G + +G I
Sbjct: 258 AAAAAAQNQKYTTQQTDSVESSLVSGIGTGATKGAPLDGNI 298
Score = 37 (18.1 bits), Expect = 8.9e-71, Sum P(4) = 8.9e-71
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 1011 GPHQLIQEIDSELPVAKPALQLT-YQI 1036
G Q Q+ +LPVA Q+T +QI
Sbjct: 2827 GQQQQQQQQQGQLPVAGQPQQVTQHQI 2853
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 781 (280.0 bits), Expect = 1.9e-109, Sum P(4) = 1.9e-109
Identities = 162/359 (45%), Positives = 231/359 (64%)
Query: 424 TSTVQT--PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+T P L K SL+EYQ GL WLV YE+ LNGILADEMGLGKTI +A LAHLA
Sbjct: 521 TTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLAC 580
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
+K IWGP L+V P SV+ NW E ++CP K L Y+G +ER + R+ + +
Sbjct: 581 DKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQG------WMKLN 634
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ IT+Y+L++ D K F+R KW+Y++LDEA IK+ S RW+TLL+FN + R+LLTGT
Sbjct: 635 SFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 694
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH++F +WF I E +N+ ++RLH +L+PF
Sbjct: 695 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPF 754
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRR+K+DV +L +K E ++ C+LS RQ+ Y+ +A ++ L
Sbjct: 755 LLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF-----IAST--ETQATLTSGSFFG 807
Query: 722 LMNIVIQLRKVCNHPELFE-RNEGSSYLYFG-------EIPNSLLPPPFG--ELEDISF 770
+++I++QLRKVCNHP+LFE R SS+ G I + LL PF +LE + F
Sbjct: 808 MISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEALGF 866
Score = 366 (133.9 bits), Expect = 1.9e-109, Sum P(4) = 1.9e-109
Identities = 69/130 (53%), Positives = 96/130 (73%)
Query: 1046 FDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDG 1104
F +L+ D GKLQ L +LL++L+ HR L+F QMTKML++LE ++N Y Y+RLDG
Sbjct: 1064 FPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG 1123
Query: 1105 SSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR 1164
S+ +R+ +++ F IF+F+LSTR+GG+GINL ADTVIFY+SDWNP +D QA DR
Sbjct: 1124 STPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDR 1183
Query: 1165 AHRLGQTKDV 1174
HR+GQT++V
Sbjct: 1184 CHRIGQTREV 1193
Score = 56 (24.8 bits), Expect = 1.9e-109, Sum P(4) = 1.9e-109
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 937 DLVVSHQERLLSNIKLLNATYTF-IPQAQAPPINVQCS 973
D+V+S ER I+L+ A +TF IP A+ P CS
Sbjct: 990 DIVLSPIERFQKMIELVEA-FTFAIPAARVPSPTCWCS 1026
Score = 46 (21.3 bits), Expect = 1.9e-109, Sum P(4) = 1.9e-109
Identities = 23/94 (24%), Positives = 37/94 (39%)
Query: 227 AKRFAETCQREVKMKVSRSLKLMRGAAIRTRKLA----RDMLLFWKRVDXXXXXXXXXXX 282
AK+ A + + + SR + ++ R RK+A +DM FW +V+
Sbjct: 73 AKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLVR 132
Query: 283 XXXXXXXXXXXXXXXXKRQQQRLNFLIQQTELYS 316
K ++L FL+ QTE YS
Sbjct: 133 NEKKK-----------KAMDKQLEFLLGQTERYS 155
Score = 43 (20.2 bits), Expect = 3.9e-109, Sum P(4) = 3.9e-109
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 191 KEEMEKIGKVWVNIVRKDIPKY 212
KEE +++ KV +NI KD+ K+
Sbjct: 96 KEEEQRLRKVALNI-SKDMKKF 116
Score = 42 (19.8 bits), Expect = 7.8e-74, Sum P(3) = 7.8e-74
Identities = 28/112 (25%), Positives = 43/112 (38%)
Query: 950 IKLLNA-TYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRK 1008
I L+ A T F P ++ Q DR T E H + RL I + ENI K
Sbjct: 1157 INLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH---IYRL-ISESTIEENI--LK 1210
Query: 1009 PGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQT 1060
+++ + V + + + F PM+ F K LT + +T
Sbjct: 1211 KANQKRVLDNL-----VIQNG-EYNTEFFKKLDPMELFSGHKALTTKDEKET 1256
Score = 37 (18.1 bits), Expect = 2.3e-27, Sum P(4) = 2.3e-27
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 571 DEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
D A AI NS+R + +++ R LLT
Sbjct: 939 DRAAAIAWWNSLRCQRKPTYSTSLRTLLT 967
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 751 (269.4 bits), Expect = 8.2e-108, Sum P(2) = 8.2e-108
Identities = 164/378 (43%), Positives = 227/378 (60%)
Query: 376 SKQKMLTNTFDTECSKLREAADTEAAMLDVSVAG-SGNIDLHNPSTMPV--TSTVQTPEL 432
S +L N D K R D A S+AG S P+ PV + +Q P L
Sbjct: 385 SSLSLLYNE-DVASKKKRRVNDDGLARKK-SIAGISEQRKFDEPNGSPVLHANKIQVPFL 442
Query: 433 FKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
F+G+L+EYQ GL+WL ++ NGILADEMGLGKTIQ +A LAHLA EK WGP L++
Sbjct: 443 FRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHLII 502
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQL 552
P SV+ NW E +F P K L Y+G QER R Y+ D +H+ ITSYQL
Sbjct: 503 VPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSG-----WYKPDT-WHVCITSYQL 556
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
++ D + FRR KWQYM+LDEA IK+ S RW++LL+FN +RLLLTGTP+QNN+ ELW+
Sbjct: 557 VLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWS 616
Query: 613 LLHFIMP-------TLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN---RLHAILKPFM 662
LL+F+MP + F + + F +WFSK ++ E G +N +N +LH +L+P++
Sbjct: 617 LLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPYL 676
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNL 722
LRR+K +V ++ K E +V+C+LS RQ+ Y N+ +R L +++
Sbjct: 677 LRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRA-------RTREILASGNFMSI 729
Query: 723 MNIVIQLRKVCNHPELFE 740
+N ++QLRKVCNHP L E
Sbjct: 730 INCLMQLRKVCNHPNLHE 747
Score = 390 (142.3 bits), Expect = 8.2e-108, Sum P(2) = 8.2e-108
Identities = 78/131 (59%), Positives = 98/131 (74%)
Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
+F +LL D GKLQ LD LLK L + HRVL+F QMTK+L+ILE ++N +RYLRLD
Sbjct: 979 AFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLD 1038
Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
G++ I R+ + F + I VF+LSTR+GGLGINLT ADTVIFY+SDWNP LD QA D
Sbjct: 1039 GATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQD 1098
Query: 1164 RAHRLGQTKDV 1174
R+HR+GQT+DV
Sbjct: 1099 RSHRIGQTRDV 1109
Score = 37 (18.1 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 950 IKLLNA-TYTFIPQAQAPPINVQCSDRNFTYRMTEEQH 986
I L A T F P ++ Q DR+ T + H
Sbjct: 1073 INLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVH 1110
Score = 37 (18.1 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 230 FAETCQREVKMKVSRSLKLMRGAAIR 255
F +T R++ +VSR + + A+ R
Sbjct: 950 FCKTIPRDLLYEVSRKINPLHQASTR 975
Score = 37 (18.1 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 17/89 (19%), Positives = 31/89 (34%)
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
++E K + L ++ Y K + + N K+I+ +
Sbjct: 882 LAEKLPKHSTSIDYTLYAKDDPLYLLNTTKALRSCILSTEERASNMKEIIQRFACITPKA 941
Query: 731 KVCNHPELFERNEGSSYLYFGEIPNSLLP 759
V + PELF + LY E+ + P
Sbjct: 942 VVVDLPELFCKTIPRDLLY--EVSRKINP 968
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 775 (277.9 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
Identities = 161/379 (42%), Positives = 238/379 (62%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ+ GL W+V YE+ LNGILADEMGLGKTIQ ++ LAH+A
Sbjct: 543 TTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMAC 602
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
++IWGP L+V P SV+ NW E ++CP LK L Y+G +ER RK + +
Sbjct: 603 SESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKG------WMKPN 656
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+ + D + F++ WQY++LDEAQ IK+ S RW+ LL+ R RLLLTGT
Sbjct: 657 CFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGT 716
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MPT+F SH+ F +WFS + E N + RLH +L+PF
Sbjct: 717 PLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPF 776
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRR+KK+V +L KTE +V+C LS RQ+ Y ++ S ++ +L +++
Sbjct: 777 ILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRS-------TKENLKSGNMMS 829
Query: 722 LMNIVIQLRKVCNHPELFE-RNEGSSYLYFG---EIPNSLLPPPFGELEDISFSGVRNPI 777
++NIV+QLRK CNHP LFE R + ++ ++P L + + S S + P
Sbjct: 830 VLNIVMQLRKCCNHPNLFEPRPVVAPFVVEKLQLDVPARLFE--ISQQDPSSSSASQIPE 887
Query: 778 EYKIPKIVHQEILQSSEIL 796
+ + KI +Q ++S++ L
Sbjct: 888 IFNLSKIGYQSSVRSAKPL 906
Score = 373 (136.4 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
Identities = 68/131 (51%), Positives = 98/131 (74%)
Query: 1046 FDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDG 1104
F +L+ D GKLQTL +LL++L HR L+F QM+KML++L+ ++++ Y+Y RLDG
Sbjct: 1177 FPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDG 1236
Query: 1105 SSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR 1164
++ + R+ M+ F +F F+LSTR+GG+G+NLT ADTVIFY+SDWNPT+D QA DR
Sbjct: 1237 TTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDR 1296
Query: 1165 AHRLGQTKDVS 1175
HR+GQT++VS
Sbjct: 1297 CHRIGQTRNVS 1307
Score = 41 (19.5 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 847 LMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENHPDRGKVRA 906
L+ +P + + + S M L+ + F D + M+G + N P G++
Sbjct: 712 LLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHK 771
Query: 907 VTRLLLI 913
V R ++
Sbjct: 772 VLRPFIL 778
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 721 (258.9 bits), Expect = 2.9e-102, Sum P(4) = 2.9e-102
Identities = 149/328 (45%), Positives = 205/328 (62%)
Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
V P L +G+L+ YQ +GL WL + Y NGILADEMGLGKTIQ ++ LA+LA EK W
Sbjct: 686 VPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENW 745
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GP L+V P SVL NW E RF P K L Y+G Q+R RK N + DA FH+
Sbjct: 746 GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWN-----KPDA-FHVC 799
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
I SYQL+V D+ F+R +WQYMVLDEA IK+ S RW+ LL+FN + RLLLTGTP+QNN
Sbjct: 800 IVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNN 859
Query: 607 MAELWALLHFIMP-TLFDSH--------EQFNEWFSKGIESHAEHGGTLNEHQ-----LN 652
+AELW+LL+F+MP T+ D + F +WF + ++ E G + + +
Sbjct: 860 LAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVA 919
Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG 712
+LH +L+P++LRR+K DV ++ K E +V+CKLS RQ+ Y ++ ++
Sbjct: 920 KLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQ-------TKA 972
Query: 713 HLNEKKILNLMNIVIQLRKVCNHPELFE 740
L ++++N ++QLRKVCNHP LFE
Sbjct: 973 TLASGNFMSIVNCLMQLRKVCNHPNLFE 1000
Score = 386 (140.9 bits), Expect = 2.9e-102, Sum P(4) = 2.9e-102
Identities = 79/164 (48%), Positives = 110/164 (67%)
Query: 1011 GPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRA 1070
G + ++ + + V+ P QL ++ + P D + L D GKLQ L ILL++L+
Sbjct: 1206 GENTRLKVMQNCFEVSNPLHQLQTKLTIAFP-----DKSLLQYDCGKLQKLAILLQQLKD 1260
Query: 1071 ENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLS 1130
HR L+F QMTK+L++LE ++NY Y Y+RLDG++ I DR+ + F S I VF+LS
Sbjct: 1261 NGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILS 1320
Query: 1131 TRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+R+GGLGINLT ADTVIFY+SDWNP +D Q DR HR+GQT+DV
Sbjct: 1321 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364
Score = 44 (20.5 bits), Expect = 3.4e-29, Sum P(3) = 3.4e-29
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 884 DVFMEAMDGELNENHPDRGKVRAVTRLLLI---PSRSETNLLRRKFTIGPGYDPCEDLVV 940
D F E + RG+ + R+ L+ P ++ TN L + PGY+ + +
Sbjct: 218 DNFYFTTSSEEEDIKKKRGRKKKKPRIKLVVHPPKQTITNPLH---VVKPGYESLHEYIA 274
Query: 941 S 941
S
Sbjct: 275 S 275
Score = 39 (18.8 bits), Expect = 2.9e-102, Sum P(4) = 2.9e-102
Identities = 27/122 (22%), Positives = 47/122 (38%)
Query: 19 YHETEFTPKVMYEPAYLDIGEGITYRIPLSYDKLAPSLNLPSFSDIQVEEFYLKGTLDLG 78
+H EF V Y+P + + E + ++ L+L + ++ KGT G
Sbjct: 35 FHLREFVSLVDYDPTHFNDSESFQKFLRETH------LSLEERGEKFTDDVAKKGTN--G 86
Query: 79 SLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGN--SSI 136
L N + S E + E L+ A + N ++ K+SD N S +
Sbjct: 87 DLTRRRRNLRTSTVVSSETTNEKKGDIE-LKLESIAPLVRNKCEELKYKLSDHSNRKSIV 145
Query: 137 PE 138
P+
Sbjct: 146 PQ 147
Score = 39 (18.8 bits), Expect = 5.3e-66, Sum P(4) = 5.3e-66
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 950 IKLLNA-TYTFIPQAQAPPINVQCSDRNFTYRMTEEQH 986
I L A T F P ++ QC DR T + H
Sbjct: 1328 INLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVH 1365
Score = 38 (18.4 bits), Expect = 2.9e-102, Sum P(4) = 2.9e-102
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSS 325
+ LN LIQ E Y HF N SS+
Sbjct: 524 ESLN-LIQLKEKYGHF--NGSST 543
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 656 (236.0 bits), Expect = 4.2e-101, Sum P(3) = 4.2e-101
Identities = 144/344 (41%), Positives = 210/344 (61%)
Query: 412 NIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 471
N DL T+ P L G LK YQLKG++WL++ ++ GLNGILAD+MGLGKTIQ
Sbjct: 177 NSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 236
Query: 472 AMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI 531
+ FL+HL + + GP+LV+AP S L+NW +EI+RF P + + Y G +R LR+
Sbjct: 237 TIGFLSHL-KGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKH 295
Query: 532 NPKRLYRRDAGFHILITSYQLLVADEK-YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF 590
PK + + F I+ITSY++ + D K R W+Y+V+DE +K+ + L
Sbjct: 296 MPKTVGPK---FPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHL 352
Query: 591 NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWF--SKGIESHA--EHGGTL 646
N+LLLTGTP+QNN++ELW+LL+FI+P +F SH++F WF S+ ++ A E
Sbjct: 353 KMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKR 412
Query: 647 NEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGL 706
+++LH IL+PF+LRR+K DV L K E++++ ++ Q+ F + + N A L
Sbjct: 413 RAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHL 472
Query: 707 FDNS-RGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLY 749
+N+ RG K LN N+VIQLRK CNHP+L + SYLY
Sbjct: 473 GENAIRGQ-GWKGKLN--NLVIQLRKNCNHPDLLQGQIDGSYLY 513
Score = 356 (130.4 bits), Expect = 4.2e-101, Sum P(3) = 4.2e-101
Identities = 74/143 (51%), Positives = 101/143 (70%)
Query: 1035 QIFGSC--PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
QI GS PP++ +++ GK + L+ LL RL A NH+VL+F+Q TK+L+I++ Y
Sbjct: 506 QIDGSYLYPPVE-----EIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYF 560
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+ + + R+DGS + +RR ++DF +S +FLLSTRAGGLGINLTAADT I Y+S
Sbjct: 561 SEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDS 620
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDR HR+GQTK V
Sbjct: 621 DWNPQMDLQAMDRCHRIGQTKPV 643
Score = 48 (22.0 bits), Expect = 4.2e-101, Sum P(3) = 4.2e-101
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 301 QQQRLNFLIQQTELYSHFMQNK 322
Q +L+ L+ QT+LYS F+ K
Sbjct: 99 QFTKLDELLTQTQLYSEFLLEK 120
Score = 37 (18.1 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 1 METTSDWLNDISPRRPT 17
+ T S+W N+I+ P+
Sbjct: 259 LSTLSNWFNEIARFTPS 275
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 711 (255.3 bits), Expect = 2.4e-100, Sum P(2) = 2.4e-100
Identities = 144/323 (44%), Positives = 203/323 (62%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
P L +G+L+EYQ GL WL Y +NGILADEMGLGKTIQ +A LAHLA E +WGP
Sbjct: 818 PHLLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPH 877
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
LVV P SV+ NW E ++CP K + Y+G +ER R+ + D +++LITS
Sbjct: 878 LVVVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRG------WMDDNSWNVLITS 931
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
YQL++ D++ +R W YM+LDEA IK+ S RW+ LL+F R RLLLTGTP+QNN+ E
Sbjct: 932 YQLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTE 991
Query: 610 LWALLHFIMPTLFDSH--------EQFNEWFSKGIESHAEHGG-TLNEHQ---LNRLHAI 657
LW+LL F+MPT D F+EWF + +E EHG T+++ + +LH +
Sbjct: 992 LWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTV 1051
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
L+P++LRR+K DV ++ K E +V+C+LS RQ+ Y ++ ++ L
Sbjct: 1052 LRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRAQ-------TKETLASG 1104
Query: 718 KILNLMNIVIQLRKVCNHPELFE 740
L+++N ++QLRKVCNHP+LFE
Sbjct: 1105 NYLSIINCLMQLRKVCNHPDLFE 1127
Score = 371 (135.7 bits), Expect = 2.4e-100, Sum P(2) = 2.4e-100
Identities = 71/131 (54%), Positives = 95/131 (72%)
Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
+F +LL D GKLQ LD LL+ L+A HR L+F QMTKML++LE ++N +RYLRLD
Sbjct: 1361 AFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLD 1420
Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
G++ + R+ + F + + I F+LS+R+GGLGINLT ADTVIFY+ DWNP +D Q D
Sbjct: 1421 GTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQD 1480
Query: 1164 RAHRLGQTKDV 1174
R HR+GQT+DV
Sbjct: 1481 RCHRIGQTRDV 1491
Score = 37 (18.1 bits), Expect = 4.0e-65, Sum P(2) = 4.0e-65
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 950 IKLLNA-TYTFIPQAQAPPINVQCSDRNFTYRMTEEQH 986
I L A T F P ++ QC DR T + H
Sbjct: 1455 INLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVH 1492
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 723 (259.6 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 144/312 (46%), Positives = 202/312 (64%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
P + K +L++YQ GL WL+ Y+ +NGILADEMGLGKT+Q ++ L++LA NIWGP
Sbjct: 655 PPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPH 714
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
LV+ P S+L NW E+ RFCP K L Y+G ER +K + + +D+ FHI I+S
Sbjct: 715 LVIVPTSILINWEIELKRFCPCFKILSYYGNQNERY--KKRVG---WFNKDS-FHICISS 768
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
Y +V D F+R +W+Y++LDEA IK+ N+ RW +LS N LL+TGTP+QN++ E
Sbjct: 769 YSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEE 828
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRRVKK 668
LW+LLHF+MP +F SH F EWFS + E + +L +RLH +++P++LRR+KK
Sbjct: 829 LWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRLKK 888
Query: 669 DVISELTTKTEVMVHCKLSSRQQAFY-QAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+V E+ K E ++ CKL+ RQQ Y + I NK N + LN + LMNI+I
Sbjct: 889 NVEKEMPNKYEHIIKCKLTRRQQILYDEFINNK--------NVQNTLNTGNYIGLMNILI 940
Query: 728 QLRKVCNHPELF 739
QLRKVCNH +LF
Sbjct: 941 QLRKVCNHCDLF 952
Score = 351 (128.6 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 65/127 (51%), Positives = 93/127 (73%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGKL L+ LL + + E ++ LLF Q KML+ILE ++N+ Y ++RLDGS+ + R+ +
Sbjct: 1767 SGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKI 1826
Query: 1115 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
V F + IF+F+ STR+G +GINLTAA+ VIFY++DWNP++D QAMDR HR+GQTKDV
Sbjct: 1827 VTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDV 1886
Query: 1175 SSWLKLC 1181
+ +C
Sbjct: 1887 HVFRFVC 1893
Score = 45 (20.9 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 236 REVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVD 271
RE KMK+ + + + + ++ ++ M +FWK+++
Sbjct: 118 RE-KMKIKKQEEEEKRLKLYSKNISSYMDVFWKKIE 152
Score = 42 (19.8 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPND 340
KR+++ N+ + E S + ++ E++ + ND ND
Sbjct: 491 KREEENKNYEKDEHEYESDNYDKEKINKKKELILLKNDIEND 532
Score = 41 (19.5 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 939 VVSHQERLLSNIKLLN 954
+++H+ LS +KLLN
Sbjct: 1273 IINHRNAFLSILKLLN 1288
Score = 39 (18.8 bits), Expect = 2.7e-24, Sum P(4) = 2.7e-24
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 802 HGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
H + ELF+ ++ S+ N + + + AS D
Sbjct: 191 HNNAHELFENKYVSMSSNNNSEIVNNNASSVD 222
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 723 (259.6 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 144/312 (46%), Positives = 202/312 (64%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
P + K +L++YQ GL WL+ Y+ +NGILADEMGLGKT+Q ++ L++LA NIWGP
Sbjct: 655 PPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPH 714
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
LV+ P S+L NW E+ RFCP K L Y+G ER +K + + +D+ FHI I+S
Sbjct: 715 LVIVPTSILINWEIELKRFCPCFKILSYYGNQNERY--KKRVG---WFNKDS-FHICISS 768
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
Y +V D F+R +W+Y++LDEA IK+ N+ RW +LS N LL+TGTP+QN++ E
Sbjct: 769 YSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEE 828
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRRVKK 668
LW+LLHF+MP +F SH F EWFS + E + +L +RLH +++P++LRR+KK
Sbjct: 829 LWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRLKK 888
Query: 669 DVISELTTKTEVMVHCKLSSRQQAFY-QAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+V E+ K E ++ CKL+ RQQ Y + I NK N + LN + LMNI+I
Sbjct: 889 NVEKEMPNKYEHIIKCKLTRRQQILYDEFINNK--------NVQNTLNTGNYIGLMNILI 940
Query: 728 QLRKVCNHPELF 739
QLRKVCNH +LF
Sbjct: 941 QLRKVCNHCDLF 952
Score = 351 (128.6 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 65/127 (51%), Positives = 93/127 (73%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGKL L+ LL + + E ++ LLF Q KML+ILE ++N+ Y ++RLDGS+ + R+ +
Sbjct: 1767 SGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKI 1826
Query: 1115 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
V F + IF+F+ STR+G +GINLTAA+ VIFY++DWNP++D QAMDR HR+GQTKDV
Sbjct: 1827 VTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDV 1886
Query: 1175 SSWLKLC 1181
+ +C
Sbjct: 1887 HVFRFVC 1893
Score = 45 (20.9 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 236 REVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVD 271
RE KMK+ + + + + ++ ++ M +FWK+++
Sbjct: 118 RE-KMKIKKQEEEEKRLKLYSKNISSYMDVFWKKIE 152
Score = 42 (19.8 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPND 340
KR+++ N+ + E S + ++ E++ + ND ND
Sbjct: 491 KREEENKNYEKDEHEYESDNYDKEKINKKKELILLKNDIEND 532
Score = 41 (19.5 bits), Expect = 1.3e-98, Sum P(5) = 1.3e-98
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 939 VVSHQERLLSNIKLLN 954
+++H+ LS +KLLN
Sbjct: 1273 IINHRNAFLSILKLLN 1288
Score = 39 (18.8 bits), Expect = 2.7e-24, Sum P(4) = 2.7e-24
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 802 HGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
H + ELF+ ++ S+ N + + + AS D
Sbjct: 191 HNNAHELFENKYVSMSSNNNSEIVNNNASSVD 222
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 663 (238.4 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 125/322 (38%), Positives = 212/322 (65%)
Query: 426 TVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
T P + G++++YQ+ GL WL+ YE+G+NGILADEMGLGKT+Q ++ L +L+E K I
Sbjct: 265 TSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGI 324
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
GP L++AP S L+ WA E +R+CP L+ + + G +ER ++KN + ++++ F +
Sbjct: 325 RGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKN---QLIFKK---FDV 378
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
IT+Y++ + ++ F++ W+Y+++DEA IK+ NS+ K + FN + RLL+TGTP+QN
Sbjct: 379 CITTYEVAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQN 438
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRR 665
N+ ELW+LL+F++P +F S + F++WF + ++ E+ + +++LH +L+PF+LRR
Sbjct: 439 NLHELWSLLNFLLPDVFSSSDDFDKWFD--LANNTEN----QQEVIDKLHKVLRPFLLRR 492
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNI 725
+K +V L K E+ + LS+ Q+ +Y+ + +K L + ++G+ + L+NI
Sbjct: 493 IKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSK-DLDAVVVGAKGNTGR---VRLLNI 548
Query: 726 VIQLRKVCNHPELFERNEGSSY 747
+QLRK CNHP LF+ E Y
Sbjct: 549 CMQLRKACNHPYLFDGAEEEPY 570
Score = 372 (136.0 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 71/126 (56%), Positives = 96/126 (76%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +SGK+ LD LLK+L+ RVL+F+QM++ML+ILEDYM YR Y+Y R+DGS+ +
Sbjct: 576 LIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIV 635
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R + + ++ SD+F FLL+TRAGGLGI L AD VI ++SDWNP +DLQA DRAHR+G
Sbjct: 636 RENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIG 695
Query: 1170 QTKDVS 1175
QTK V+
Sbjct: 696 QTKPVT 701
Score = 63 (27.2 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSS 325
K RL +L+++TE+++HF+ N +++
Sbjct: 169 KSANARLKYLLERTEIFTHFVSNSNNN 195
Score = 37 (18.1 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 751 GEIPNSLLPPPFGEL 765
GE+P P FG+L
Sbjct: 899 GELPEEEEEPDFGDL 913
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 672 (241.6 bits), Expect = 3.7e-96, Sum P(2) = 3.7e-96
Identities = 146/343 (42%), Positives = 210/343 (61%)
Query: 413 IDLHNPS-TMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 471
ID +N + + T Q L G LKEYQL+GLQW+++ Y LNGILADEMGLGKTIQ
Sbjct: 392 IDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQ 451
Query: 472 AMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI 531
++ + HL E+K GPFLV+ P S L NW E R+ P + + Y G Q +RK +
Sbjct: 452 TISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQ----VRKAL 507
Query: 532 NPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF- 590
+P+ R + F +L+T+Y+ ++ D R+KW YM++DE +K++ S TL ++
Sbjct: 508 HPQV---RHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYY 564
Query: 591 NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT----L 646
+ R RL+LTGTP+QNN+ ELWALL+F++P +F+S + F+EWF+ A GG L
Sbjct: 565 SSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPF---ANTGGQDKMEL 621
Query: 647 NEHQ----LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS 702
E + + RLH +L+PF+LRR+KKDV +EL K E ++ C++S QQ Y +K K
Sbjct: 622 TEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMK-KHG 680
Query: 703 LAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+ + D RG K L N V+QL+K+CNHP +FE E S
Sbjct: 681 MLYVEDAKRGKTGIK---GLQNTVMQLKKICNHPFVFEDVERS 720
Score = 365 (133.5 bits), Expect = 3.7e-96, Sum P(2) = 3.7e-96
Identities = 69/121 (57%), Positives = 94/121 (77%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +L HR+L+F QMT+++NI+EDY++YR++RYLRLDGS+ DR +
Sbjct: 735 SGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKL 794
Query: 1115 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+ F +++ +FLLSTRAGGLG+NL ADTVI ++SDWNP DLQA DRAHR+GQTK+
Sbjct: 795 LGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKE 854
Query: 1174 V 1174
V
Sbjct: 855 V 855
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 575 (207.5 bits), Expect = 2.4e-95, Sum P(3) = 2.4e-95
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 395 (144.1 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 360 (131.8 bits), Expect = 2.4e-95, Sum P(3) = 2.4e-95
Identities = 74/143 (51%), Positives = 100/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R + + F S F+F+LSTRAGGLGINL +AD VI Y+S
Sbjct: 526 MWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDS 585
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 586 DWNPQVDLQAMDRAHRIGQKKPV 608
Score = 75 (31.5 bits), Expect = 2.4e-95, Sum P(3) = 2.4e-95
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNIKLGRP 131
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 624 (224.7 bits), Expect = 2.0e-94, Sum P(2) = 2.0e-94
Identities = 130/326 (39%), Positives = 198/326 (60%)
Query: 432 LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 491
+ G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L E K I GPFL+
Sbjct: 1 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 60
Query: 492 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQ 551
+ P S L+NWA E ++ P + + Y G R+ P+ R F++L+T+Y+
Sbjct: 61 IVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RSGKFNVLLTTYE 113
Query: 552 LLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNNMAEL 610
++ D+ +++W+YM++DE +K+ + + L + + RLLLTGTP+QN + EL
Sbjct: 114 YIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPEL 173
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFMLRRV 666
WALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+LRR+
Sbjct: 174 WALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLHKVLRPFLLRRL 232
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILNLMNI 725
KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S K LMN
Sbjct: 233 KKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKKGKGGTKTLMNT 290
Query: 726 VIQLRKVCNHPELFERNEGSSYLYFG 751
++QLRK+CNHP +F+ E S + G
Sbjct: 291 IMQLRKICNHPYMFQHIEESFSEHLG 316
Score = 377 (137.8 bits), Expect = 2.0e-94, Sum P(2) = 2.0e-94
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 331 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 390
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 391 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 450
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 451 VRV-LRLC 457
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 578 (208.5 bits), Expect = 4.0e-94, Sum P(4) = 4.0e-94
Identities = 122/285 (42%), Positives = 179/285 (62%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+ F G ++ YQ++G++WL +E G+NGILADEMGLGKT+Q +A +A L ++ +
Sbjct: 214 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 272
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF PD+ T+ Y G QER L KNI+ KR + H +
Sbjct: 273 GPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIH-KR--KGTLQIHPV 329
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS+++ + D + W+Y+++DE IK+ + L FN N+LLLTGTP+QN
Sbjct: 330 VITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 389
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFM 662
N++ELW+LL+F++P +FD + F WF + AE ++ L+ LH IL PF+
Sbjct: 390 NLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFL 449
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLF 707
LRR+K DV E+ K EV+V+ LS +Q+ FY AI N+ ++A +F
Sbjct: 450 LRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR-TIANMF 493
Score = 389 (142.0 bits), Expect = 4.0e-94, Sum P(4) = 4.0e-94
Identities = 76/135 (56%), Positives = 97/135 (71%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+A H+VLLF+QMT+ML+IL DY ++R + +
Sbjct: 584 PVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQMTRMLDILMDYCHFRNFNF 643
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F D+F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 644 SRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 703
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 704 QAQDRCHRIGQTKPV 718
Score = 68 (29.0 bits), Expect = 4.0e-94, Sum P(4) = 4.0e-94
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP L E
Sbjct: 559 LKLQNIMMLLRKCCNHPYLIE 579
Score = 48 (22.0 bits), Expect = 4.0e-94, Sum P(4) = 4.0e-94
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 66 RRLQHLLEKSNIYSKFLLTKMEQQQLE 92
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(3) = 8.8e-34
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 68 LQHLLEKSNIYSKFLL 83
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 575 (207.5 bits), Expect = 5.4e-94, Sum P(4) = 5.4e-94
Identities = 119/288 (41%), Positives = 181/288 (62%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+ F G ++ YQ++G++WL +E G+NGILADEMGLGKT+Q +A +A L ++ +
Sbjct: 191 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 249
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF P++ T+ Y G QER +L K+I+ ++ H +
Sbjct: 250 GPFLVCGPLSTLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKHIHERK---GTLQIHPV 306
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS+++ + D + W+Y+++DE IK+ + L FN N+LLLTGTP+QN
Sbjct: 307 VITSFEIAMRDRTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 366
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFM 662
N++ELW+LL+F++P +FD + F WF + AE ++ L+ LH IL PF+
Sbjct: 367 NLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFL 426
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS 710
LRR+K DV E+ K EV+V+ LS +Q+ FY AI N+ ++A +F +S
Sbjct: 427 LRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR-TIANMFGSS 473
Score = 384 (140.2 bits), Expect = 5.4e-94, Sum P(4) = 5.4e-94
Identities = 74/135 (54%), Positives = 96/135 (71%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+ H+VLLF+QMT+ML+IL DY ++R + +
Sbjct: 561 PVTQEFKVDEELVTNSGKFLILDRMLPELKTRGHKVLLFSQMTRMLDILMDYCHFRNFNF 620
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F D+F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 621 SRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 680
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQT+ V
Sbjct: 681 QAQDRCHRIGQTRPV 695
Score = 68 (29.0 bits), Expect = 5.4e-94, Sum P(4) = 5.4e-94
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP L E
Sbjct: 536 LKLQNIMMLLRKCCNHPYLIE 556
Score = 48 (22.0 bits), Expect = 5.4e-94, Sum P(4) = 5.4e-94
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 45 RRLQHLLEKSNIYSKFLLTKMEQQQLE 71
Score = 42 (19.8 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 47 LQHLLEKSNIYSKFLL 62
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 624 (224.7 bits), Expect = 5.6e-94, Sum P(3) = 5.6e-94
Identities = 133/333 (39%), Positives = 204/333 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T ++P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 146 TTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 205
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW +E R+ P L+ + G +R +++ L
Sbjct: 206 YMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDV----LL 261
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 262 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 319
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELWALL+F++P +F+S E F+ WF + L + +L RLH
Sbjct: 320 LTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF--------DTNNCLGDQKLVERLHM 371
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G L+
Sbjct: 372 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKLD 427
Query: 716 EKKILNLMNIVIQLRKVCNHPELFERNE-GSSY 747
+ + L+NI++QLRK CNHP LF+ E G Y
Sbjct: 428 K---MRLLNILMQLRKCCNHPYLFDGAEPGPPY 457
Score = 366 (133.9 bits), Expect = 5.6e-94, Sum P(3) = 5.6e-94
Identities = 77/143 (53%), Positives = 100/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 446 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 504
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+ + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 505 MWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDS 564
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 565 DWNPQVDLQAMDRAHRIGQTKTV 587
Score = 69 (29.3 bits), Expect = 5.6e-94, Sum P(3) = 5.6e-94
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 76 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 110
Score = 38 (18.4 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 763 PPRLFELLEKEILYYRKTIGYKVPR 787
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 635 (228.6 bits), Expect = 2.6e-93, Sum P(3) = 2.6e-93
Identities = 132/321 (41%), Positives = 203/321 (63%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
++P G L+ YQ++G+ WLV+ ++ + GILADEMGLGKT+Q ++FL +L + I G
Sbjct: 187 ESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPG 246
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
PFLV+AP S LNNW EI+R+ PD+ G +ER L + K+L D F ++I
Sbjct: 247 PFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ----KKLLGCD--FDVVI 300
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
SY++++ ++ +++ W+Y+++DEA IK+ S+ + L F RNRLL+TGTP+QNN+
Sbjct: 301 ASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNL 360
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
ELWALL+F++P +F + F++WFS ES E + + +LH +L+PF+LRR+K
Sbjct: 361 HELWALLNFLLPDIFSDAQDFDDWFSS--ESTEEDQDKI----VKQLHTVLQPFLLRRIK 414
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
DV + L K E+ ++ +SS Q+ +Y+ I K L + + S G K L+NI++
Sbjct: 415 SDVETSLLPKKELNLYVGMSSMQKKWYKKILEK-DLDAV-NGSNGSKESKT--RLLNIMM 470
Query: 728 QLRKVCNHPELFERNE-GSSY 747
QLRK CNHP LF+ E G Y
Sbjct: 471 QLRKCCNHPYLFDGAEPGPPY 491
Score = 372 (136.0 bits), Expect = 2.6e-93, Sum P(3) = 2.6e-93
Identities = 78/143 (54%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+ ++ KLQ LD LLK+L+ E RVL+F+QM+++L+ILEDY
Sbjct: 480 YLFDGAEPGPPYTTDE-HLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYC 538
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y R+DGS+ DR + D+ S FVFLL+TRAGGLGINLT+AD V+ Y+S
Sbjct: 539 YFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDS 598
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP DLQAMDRAHR+GQ K V
Sbjct: 599 DWNPQADLQAMDRAHRIGQKKQV 621
Score = 49 (22.3 bits), Expect = 2.6e-93, Sum P(3) = 2.6e-93
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPS--EVLPV 333
+R L+ + L+ HF+++K++ P +VL V
Sbjct: 107 KRFEHLLSLSGLFKHFIESKAAKDPKFRQVLDV 139
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 601 (216.6 bits), Expect = 3.8e-93, Sum P(4) = 3.8e-93
Identities = 131/315 (41%), Positives = 193/315 (61%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+LF G ++ YQ++G++WL +E G+NGILADEMGLGKTIQ +A +A + E+K +
Sbjct: 223 QQPQLFTGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKK-VL 281
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GPFLVVAP S L NW E RF P++ L Y G +ER+ L K I + R ++
Sbjct: 282 GPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCP--VV 339
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TS+++ + D K+ +R W Y+++DE IK+ N + L N+LLLTGTP+QNN
Sbjct: 340 VTSFEIAMRDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNN 399
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEHGGTLNEHQ---LNRLHAILKPFM 662
++ELW+LL+F++P +FD + F WF I S AE+ NE + L+ LH IL PF+
Sbjct: 400 LSELWSLLNFLLPDVFDDLKSFESWFDISTITSDAENI-VANEREQNILHMLHLILTPFL 458
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNL 722
LRR+K DV E+ K E++V+ L+++Q+AFY AI NK ++A L + +
Sbjct: 459 LRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNK-TIAKLLGQEKDESAPAPLTPS 517
Query: 723 MNIVIQLRKVCNHPE 737
+ RKV N+ E
Sbjct: 518 GRPKRRSRKVVNYTE 532
Score = 361 (132.1 bits), Expect = 3.8e-93, Sum P(4) = 3.8e-93
Identities = 70/125 (56%), Positives = 90/125 (72%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
+L+ SGK LD +L L+ H+VL+F+QMT +L+IL DY R Y Y RLDGS +
Sbjct: 609 QLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYA 668
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
DR + ++ F ++F+FLLSTRAGGLGINLT+ADTVI ++SDWNP DLQA DR HR+G
Sbjct: 669 DRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIG 728
Query: 1170 QTKDV 1174
QTK V
Sbjct: 729 QTKPV 733
Score = 54 (24.1 bits), Expect = 3.8e-93, Sum P(4) = 3.8e-93
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ L++ CNH L E
Sbjct: 574 LKLQNILMLLKRCCNHAYLIE 594
Score = 50 (22.7 bits), Expect = 3.8e-93, Sum P(4) = 3.8e-93
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 85 KRLQHLLEKSNIYSKFLLTKMEQQQQE 111
Score = 48 (22.0 bits), Expect = 9.0e-30, Sum P(3) = 9.0e-30
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 467 GKTIQAMAF--LAHLAEEKNIWGPFLV 491
G Q M F L HL E+ NI+ FL+
Sbjct: 76 GNDSQEMRFKRLQHLLEKSNIYSKFLL 102
Score = 42 (19.8 bits), Expect = 9.7e-29, Sum P(3) = 9.7e-29
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 664 RRVKKDV-ISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS-LAGLFD-NS--RGHLNEKK 718
+R ++D I+++ TK E+M K ++ ++K + + L D NS +G L+E
Sbjct: 142 KRGREDYKIADVMTKEEIMSKAKKPKMEEEAQASVKLEAEDIEKLSDTNSDIKGRLSETL 201
Query: 719 ILNLMNIVIQLRKVCNHP 736
N ++ R V P
Sbjct: 202 RENSKQMLDPERTVNGQP 219
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 673 (242.0 bits), Expect = 9.8e-93, Sum P(4) = 9.8e-93
Identities = 139/324 (42%), Positives = 203/324 (62%)
Query: 427 VQTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
V+ P++F G +LK+YQLKGL+W+++ Y LNGILADEMGLGKTIQ +AF+ +L E+KN
Sbjct: 858 VEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQ 917
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
GPFL++ P S L NW E ++ P +K + Y G Q R L+ I R + F++
Sbjct: 918 QGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQI-------RSSNFNV 970
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF-NCRNRLLLTGTPIQ 604
L+T+++ ++ D R+KW +M++DE IK++ S TL ++ + + RL+LTGTP+Q
Sbjct: 971 LLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQ 1030
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT----LNEHQ----LNRLHA 656
NN+ ELWALL+F++P +F+S + F+EWF+ A GG LNE + + RLH
Sbjct: 1031 NNLPELWALLNFVLPKIFNSIKSFDEWFNTPF---ANTGGQDKIGLNEEEALLIIKRLHK 1087
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE 716
+L+PF+ RR+KKDV EL K E ++ C LS Q YQ +K L D +G
Sbjct: 1088 VLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGML--FVDGEKGKTGI 1145
Query: 717 KKILNLMNIVIQLRKVCNHPELFE 740
K L N V+QL+K+CNHP +FE
Sbjct: 1146 K---GLQNTVMQLKKICNHPFIFE 1166
Score = 347 (127.2 bits), Expect = 9.8e-93, Sum P(4) = 9.8e-93
Identities = 63/121 (52%), Positives = 91/121 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L +L H+ L+F QMT+++ I+EDY+ + ++YLRLDGS+ DR +
Sbjct: 1186 AGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSL 1245
Query: 1115 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+ F +SD+++F+LSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQTK+
Sbjct: 1246 LAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKE 1305
Query: 1174 V 1174
V
Sbjct: 1306 V 1306
Score = 46 (21.3 bits), Expect = 9.8e-93, Sum P(4) = 9.8e-93
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 409 GSGNIDLHNPSTM 421
G+GN+ L+NPS M
Sbjct: 118 GNGNVGLNNPSYM 130
Score = 39 (18.8 bits), Expect = 9.8e-93, Sum P(4) = 9.8e-93
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 131 TGNSSIPEGAAG 142
TG +++PEG AG
Sbjct: 88 TGFNNLPEGKAG 99
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 627 (225.8 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 71 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 130
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 131 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 183
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 184 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 243
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 244 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 302
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 303 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 360
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 361 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 397
Score = 377 (137.8 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 412 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 471
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 472 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 531
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 532 VRV-LRLC 538
Score = 38 (18.4 bits), Expect = 1.0e-92, Sum P(3) = 1.0e-92
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 77 KQSALMVNGVLKQYQIKGLE 96
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 638 (229.6 bits), Expect = 1.3e-92, Sum P(3) = 1.3e-92
Identities = 144/401 (35%), Positives = 230/401 (57%)
Query: 374 AVSKQKMLTNTFDTECSKLREAADTEAAMLDV-----SVAGSGNIDLHNPSTMPVTSTV- 427
A S++K + + E S+ E+A DV S AG + + V V
Sbjct: 656 AESEEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSSQAGQTSSQSYYGVAHAVIERVD 715
Query: 428 -QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q+ L G+LK+YQ++GL+W+V+ Y LNGILADEMGLGKTIQ + + +L E K +
Sbjct: 716 KQSTFLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMELKRLN 775
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GP+L++ P S L+NW E+ ++ P + + Y G +R+++ P+ R F++L
Sbjct: 776 GPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPS----MRRSLVPQL---RSGKFNVL 828
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQN 605
IT+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLTGTP+QN
Sbjct: 829 ITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 888
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPF 661
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF
Sbjct: 889 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPF 947
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-IL 720
+LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 948 LLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGIL--LTDGSEKDKKGKGGAK 1005
Query: 721 NLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPP 761
LMN ++QL+K+CNHP +F+ E S + G PN ++ P
Sbjct: 1006 TLMNTIMQLKKICNHPYMFQHIEESFAEHLG-FPNGIISGP 1045
Score = 381 (139.2 bits), Expect = 1.3e-92, Sum P(3) = 1.3e-92
Identities = 74/128 (57%), Positives = 94/128 (73%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +L+A NHRVLLF QMT ++ ILEDY YR + YLRLDG++ DR +
Sbjct: 1051 SGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAML 1110
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1111 LKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNE 1170
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1171 VRV-LRLC 1177
Score = 42 (19.8 bits), Expect = 1.3e-92, Sum P(3) = 1.3e-92
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 523 QKKDKRLAYLLQQTDEY 539
Score = 39 (18.8 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1005 GPRKPGGPHQLIQEIDSELPVAKP 1028
GP +P QL Q+ + +P+ KP
Sbjct: 314 GPGQPSLIIQLQQKQNRVIPIQKP 337
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 568 (205.0 bits), Expect = 4.0e-92, Sum P(4) = 4.0e-92
Identities = 119/288 (41%), Positives = 179/288 (62%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+ F G ++ YQ++G++WL +E G+NGILADEMGLGKT+Q +A +A L ++ +
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF P++ T+ Y G QER L +I+ KR + H +
Sbjct: 272 GPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIH-KR--KGTLQIHPV 328
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS+++ + D + W+Y+++DE IK+ + L FN N+LLLTGTP+QN
Sbjct: 329 VITSFEIAMRDRNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 388
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFM 662
N++ELW+LL+F++P +FD + F WF + AE ++ L+ LH IL PF+
Sbjct: 389 NLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFL 448
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS 710
LRR+K DV E+ K EV+V+ LS +Q+ FY AI N+ ++ +F +S
Sbjct: 449 LRRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIVNR-TITNMFGSS 495
Score = 384 (140.2 bits), Expect = 4.0e-92, Sum P(4) = 4.0e-92
Identities = 75/135 (55%), Positives = 96/135 (71%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+ H+VLLF+QMT+ML+IL DY ++R + +
Sbjct: 583 PVTQEFKIDEELVTNSGKFLILDRMLPELKIRGHKVLLFSQMTRMLDILMDYCHFRNFNF 642
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F D+F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 643 SRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 702
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 703 QAQDRCHRIGQTKPV 717
Score = 68 (29.0 bits), Expect = 4.0e-92, Sum P(4) = 4.0e-92
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP L E
Sbjct: 558 LKLQNIMMLLRKCCNHPYLIE 578
Score = 48 (22.0 bits), Expect = 4.0e-92, Sum P(4) = 4.0e-92
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 66 RRLQHLLEKSNIYSKFLLTKMEQQQLE 92
Score = 42 (19.8 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 68 LQHLLEKSNIYSKFLL 83
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 666 (239.5 bits), Expect = 4.4e-92, Sum P(2) = 4.4e-92
Identities = 137/319 (42%), Positives = 203/319 (63%)
Query: 427 VQTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
++ P+L G LKEYQ+ GL+WL++ Y + LNGILADEMGLGKT+Q +AF++ L E N+
Sbjct: 613 IEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNV 672
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
PFLVVAP S ++NW E +R+ P L + Y G ER + I P R+A F +
Sbjct: 673 REPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETARTI-P-----RNA-FCV 725
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS++ ++ D K RV W Y+++DE IK+ NS L ++ RNRLLLTGTP+QN
Sbjct: 726 VITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQN 785
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPF 661
++ ELWALL+F++PT+F+S + F WF+ ++ ++ +NE + +NRLH +L+ F
Sbjct: 786 DLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQVLRFF 845
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRR+K DV S+L K E ++ C +S+ Q A Y+++ L D+ G K+
Sbjct: 846 LLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGRSGRLKMKG 905
Query: 722 LMNIVIQLRKVCNHPELFE 740
NIV QL+K+CNHP LF+
Sbjct: 906 FNNIVKQLQKICNHPYLFK 924
Score = 340 (124.7 bits), Expect = 4.4e-92, Sum P(2) = 4.4e-92
Identities = 62/126 (49%), Positives = 92/126 (73%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGK T+D +L ++ A HRVL+F QMT+++N++E+Y + +++ +LRLDGS+ +
Sbjct: 933 LIRTSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEE 992
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R +V ++ S ++F+LST AGGLG+NL ADTVI ++SDWNP +DLQA DR HR+G
Sbjct: 993 RAHLVVEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIG 1052
Query: 1170 QTKDVS 1175
QT VS
Sbjct: 1053 QTNSVS 1058
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 574 (207.1 bits), Expect = 6.9e-92, Sum P(4) = 6.9e-92
Identities = 121/288 (42%), Positives = 180/288 (62%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+ F G ++ YQ++G++WL +E G+NGILADEMGLGKT+Q +A +A L ++ +
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF PD+ T+ Y G +ER L +NI KR + H +
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIY-KR--KGTLQIHPV 328
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS+++ + D + W+Y+++DE IK+ + L FN N+LLLTGTP+QN
Sbjct: 329 VITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 388
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFM 662
N++ELW+LL+F++P +FD + F WF + AE ++ L+ LH IL PF+
Sbjct: 389 NLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFL 448
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS 710
LRR+K DV E+ K EV+V+ LS +Q+ FY AI N+ ++A +F +S
Sbjct: 449 LRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR-TIANMFGSS 495
Score = 373 (136.4 bits), Expect = 6.9e-92, Sum P(4) = 6.9e-92
Identities = 74/135 (54%), Positives = 94/135 (69%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+ H+VLLF+QMT ML+IL DY + R + +
Sbjct: 583 PVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNF 642
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F ++F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 643 SRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 702
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 703 QAQDRCHRIGQTKPV 717
Score = 68 (29.0 bits), Expect = 6.9e-92, Sum P(4) = 6.9e-92
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP L E
Sbjct: 558 LKLQNIMMLLRKCCNHPYLIE 578
Score = 48 (22.0 bits), Expect = 6.9e-92, Sum P(4) = 6.9e-92
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 66 RRLQHLLEKSNIYSKFLLTKMEQQQLE 92
Score = 42 (19.8 bits), Expect = 5.4e-32, Sum P(3) = 5.4e-32
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 68 LQHLLEKSNIYSKFLL 83
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 595 (214.5 bits), Expect = 9.6e-92, Sum P(3) = 9.6e-92
Identities = 126/322 (39%), Positives = 195/322 (60%)
Query: 429 TPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P K G +++YQ++GL W+++ YE G+NGILADEMGLGKT+Q ++ L +L KN G
Sbjct: 119 SPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAG 178
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P +V+ P S L NW +E ++CP L+ + G R +++ + + +
Sbjct: 179 PHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------LMPGEWDVCV 232
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
TSY++ + ++ F++ W+Y+V+DEA IK+ S + L F NRLL+TGTP+QNN+
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNL 292
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
ELWALL+F++P +F+S E F+EWF+ ++ G ++ + RLHA+LKPF+LRR+K
Sbjct: 293 HELWALLNFLLPDVFNSSEDFDEWFN----TNTCLG---DDALITRLHAVLKPFLLRRLK 345
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNLMNIV 726
+V L K E+ + LS Q+ +Y + K I + N G + EK + L NI+
Sbjct: 346 AEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVV----NGAGKV-EK--MRLQNIL 398
Query: 727 IQLRKVCNHPELFERNE-GSSY 747
+QLRK NHP LF+ E G Y
Sbjct: 399 MQLRKCTNHPYLFDGAEPGPPY 420
Score = 371 (135.7 bits), Expect = 9.6e-92, Sum P(3) = 9.6e-92
Identities = 77/143 (53%), Positives = 100/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+ +SGK+ LD LL +L+ + RVL+F+QMT+ML+ILEDY
Sbjct: 409 YLFDGAEPGPPYTTD-THLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYC 467
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
++R Y Y RLDG + DR +++F S F+F+LSTRAGGLGINL AD VI Y+S
Sbjct: 468 HWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDS 527
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 528 DWNPQMDLQAMDRAHRIGQKKQV 550
Score = 75 (31.5 bits), Expect = 9.6e-92, Sum P(3) = 9.6e-92
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 301 QQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDK 337
+ +R +FL++QTE+++HFM N + S P++ P G K
Sbjct: 43 RSRRFDFLLKQTEIFTHFMTNSAKS-PTK--PKGRPK 76
Score = 44 (20.5 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL D R + YK+PK
Sbjct: 732 PPRLFELLDQEIYYFRKTVGYKVPK 756
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1000 TSENIGPRKPGGPHQLIQEIDSELPVA 1026
T+ P KP G + I++ D E VA
Sbjct: 62 TNSAKSPTKPKGRPKKIKDKDKEKDVA 88
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 576 (207.8 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 124/300 (41%), Positives = 184/300 (61%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P++F G ++ YQ++G++WL +E G+NGILADEMGLGKTIQ +A +A L E+ +
Sbjct: 212 QQPKIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIA-LMVERGVP 270
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF P++ + Y G QER L + I+ ++ H +
Sbjct: 271 GPFLVCGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQ---GSLKIHPV 327
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
+ITS+++ + D + W+Y+++DE IK+ N + L FN N+LLLTGTP+QN
Sbjct: 328 VITSFEIAMRDRNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQN 387
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEHGGTLNEHQ--LNRLHAILKPFM 662
N+AELW+LL+F++P +FD + F WF I AE + Q L+ LH IL PF+
Sbjct: 388 NLAELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQNILHMLHQILTPFL 447
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNL 722
LRR+K DV E+ K EV+V+ L+ +Q+ FY AI N+ ++ L N NE++++ L
Sbjct: 448 LRRLKSDVALEVPPKREVVVYAPLAKKQETFYTAIVNR-TIRNLLGN-----NEEEVVEL 501
Score = 369 (135.0 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 73/135 (54%), Positives = 95/135 (70%)
Query: 1041 PPMQSFDPAK-LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F + L+ +SGK LD +L L+ H+VL+F+QMT ML+IL DY R +++
Sbjct: 583 PATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCYLRGFKF 642
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + DR + + F + ++F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 643 SRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 702
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 703 QAQDRCHRIGQTKPV 717
Score = 68 (29.0 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP L E
Sbjct: 558 LKLQNIMMLLRKCCNHPYLIE 578
Score = 48 (22.0 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 65 KRLQHLLEKSNIYSKFLLTKMEQQQLE 91
Score = 42 (19.8 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 67 LQHLLEKSNIYSKFLL 82
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 627 (225.8 bits), Expect = 1.2e-91, Sum P(3) = 1.2e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 537 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 596
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 597 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 649
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 650 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 709
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 710 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 768
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 769 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 826
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 827 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 863
Score = 377 (137.8 bits), Expect = 1.2e-91, Sum P(3) = 1.2e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 878 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 937
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 938 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 997
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 998 VRV-LRLC 1004
Score = 42 (19.8 bits), Expect = 1.2e-91, Sum P(3) = 1.2e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 343 QKKDKRLAYLLQQTDEY 359
Score = 38 (18.4 bits), Expect = 3.2e-91, Sum P(3) = 3.2e-91
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 543 KQSALMVNGVLKQYQIKGLE 562
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 626 (225.4 bits), Expect = 2.8e-91, Sum P(3) = 2.8e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 689 QSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 748
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 749 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 801
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 802 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 861
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 862 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 920
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 921 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 978
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 979 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1008
Score = 381 (139.2 bits), Expect = 2.8e-91, Sum P(3) = 2.8e-91
Identities = 76/134 (56%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1017 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1076
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTVI ++SDWNP DLQA DRAHR
Sbjct: 1077 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHR 1136
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1137 IGQQNEVRV-LRLC 1149
Score = 42 (19.8 bits), Expect = 2.8e-91, Sum P(3) = 2.8e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 493 QKKDRRLAYLLQQTDEY 509
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 626 (225.4 bits), Expect = 3.7e-91, Sum P(3) = 3.7e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 699 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 758
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 759 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 811
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 812 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 871
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 872 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 930
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 988
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 989 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1018
Score = 380 (138.8 bits), Expect = 3.7e-91, Sum P(3) = 3.7e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1027 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1086
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1087 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1146
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1147 IGQQNEVRV-LRLC 1159
Score = 42 (19.8 bits), Expect = 3.7e-91, Sum P(3) = 3.7e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 504 QKKDRRLAYLLQQTDEY 520
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 626 (225.4 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 715 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 774
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 775 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 827
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 828 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 887
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 888 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 946
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 947 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 1004
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1005 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1034
Score = 380 (138.8 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1043 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1102
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1103 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1162
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1163 IGQQNEVRV-LRLC 1175
Score = 42 (19.8 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 520 QKKDRRLAYLLQQTDEY 536
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 626 (225.4 bits), Expect = 7.3e-91, Sum P(4) = 7.3e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 722 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 781
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 782 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 834
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 835 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 894
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 895 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 953
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 1011
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1012 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1041
Score = 380 (138.8 bits), Expect = 7.3e-91, Sum P(4) = 7.3e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1050 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1109
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1110 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1169
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1170 IGQQNEVRV-LRLC 1182
Score = 42 (19.8 bits), Expect = 7.3e-91, Sum P(4) = 7.3e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 527 QKKDRRLAYLLQQTDEY 543
Score = 41 (19.5 bits), Expect = 7.3e-91, Sum P(4) = 7.3e-91
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 73 GTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTG 132
GTL G L AM ++ P S V + + R Q + + ++A P +L+++ G
Sbjct: 154 GTLIPGDLQAMNQPNRGPSPFSPVQLHQLRAQILAYK-----MLARGQPLPETLQLAVQG 208
Query: 133 NSSIP 137
++P
Sbjct: 209 KRTLP 213
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 627 (225.8 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 730 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 842
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 843 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 902
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 903 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 961
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 962 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1019
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1056
Score = 377 (137.8 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1071 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1130
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1131 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1190
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1191 VRV-LRLC 1197
Score = 42 (19.8 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 536 QKKDKRLAYLLQQTDEY 552
Score = 38 (18.4 bits), Expect = 1.9e-90, Sum P(3) = 1.9e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 736 KQSALMVNGVLKQYQIKGLE 755
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 627 (225.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 627 (225.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 627 (225.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 627 (225.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(3) = 7.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 626 (225.4 bits), Expect = 7.5e-91, Sum P(4) = 7.5e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 697 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 756
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 757 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 809
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 810 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 869
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 870 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 928
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 929 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 986
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 987 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1016
Score = 380 (138.8 bits), Expect = 7.5e-91, Sum P(4) = 7.5e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1025 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1084
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1085 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1144
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1145 IGQQNEVRV-LRLC 1157
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(4) = 7.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 502 QKKDRRLAYLLQQTDEY 518
Score = 42 (19.8 bits), Expect = 7.5e-91, Sum P(4) = 7.5e-91
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 100 EPRPQYESLQARLKALVASNSP 121
+P+PQ + Q + +ALV N P
Sbjct: 223 QPQPQPQQPQPQQQALVNYNRP 244
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 626 (225.4 bits), Expect = 7.6e-91, Sum P(4) = 7.6e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 699 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 758
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 759 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 811
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 812 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 871
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 872 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 930
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 988
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 989 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1018
Score = 380 (138.8 bits), Expect = 7.6e-91, Sum P(4) = 7.6e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1027 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1086
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1087 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1146
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1147 IGQQNEVRV-LRLC 1159
Score = 42 (19.8 bits), Expect = 7.6e-91, Sum P(4) = 7.6e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 504 QKKDRRLAYLLQQTDEY 520
Score = 42 (19.8 bits), Expect = 7.6e-91, Sum P(4) = 7.6e-91
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 101 PRPQYESLQARLKALVASNSP 121
P+PQ ++ Q + +ALV N P
Sbjct: 226 PQPQPQAQQPQQQALVNYNRP 246
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 627 (225.8 bits), Expect = 7.6e-91, Sum P(3) = 7.6e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 7.6e-91, Sum P(3) = 7.6e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 7.6e-91, Sum P(3) = 7.6e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 626 (225.4 bits), Expect = 8.4e-91, Sum P(4) = 8.4e-91
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 699 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 758
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 759 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 811
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 812 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 871
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 872 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 930
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 988
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 989 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1018
Score = 380 (138.8 bits), Expect = 8.4e-91, Sum P(4) = 8.4e-91
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1027 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1086
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1087 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1146
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1147 IGQQNEVRV-LRLC 1159
Score = 42 (19.8 bits), Expect = 8.4e-91, Sum P(4) = 8.4e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 504 QKKDRRLAYLLQQTDEY 520
Score = 42 (19.8 bits), Expect = 8.4e-91, Sum P(4) = 8.4e-91
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 101 PRPQYESLQARLKALVASNSP 121
P+PQ ++ Q + +ALV N P
Sbjct: 226 PQPQPQAQQPQQQALVNYNRP 246
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 627 (225.8 bits), Expect = 8.5e-91, Sum P(3) = 8.5e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 8.5e-91, Sum P(3) = 8.5e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 8.5e-91, Sum P(3) = 8.5e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.2e-90, Sum P(3) = 2.2e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 627 (225.8 bits), Expect = 9.6e-91, Sum P(3) = 9.6e-91
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 738 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 850
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 969
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 970 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1027
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064
Score = 377 (137.8 bits), Expect = 9.6e-91, Sum P(3) = 9.6e-91
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1199 VRV-LRLC 1205
Score = 42 (19.8 bits), Expect = 9.6e-91, Sum P(3) = 9.6e-91
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 544 QKKDKRLAYLLQQTDEY 560
Score = 38 (18.4 bits), Expect = 2.5e-90, Sum P(3) = 2.5e-90
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 744 KQSALMVNGVLKQYQIKGLE 763
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 600 (216.3 bits), Expect = 1.0e-90, Sum P(3) = 1.0e-90
Identities = 120/278 (43%), Positives = 178/278 (64%)
Query: 424 TSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 483
T + P +G L++YQL GL WL+ YE G+NGILADEMGLGKT+Q ++ LA+L E +
Sbjct: 181 TRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 484 NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG- 542
I GP +VVAP S L NW +EI RFCP L+ + + G +ER +R+ + L AG
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREEL----LV---AGK 293
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F I +TS+++ + ++ RR W+Y+++DEA IK+ NS+ KT+ F+ RLL+TGTP
Sbjct: 294 FDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFM 662
+QNN+ ELWALL+F++P +F S E F+EWF E+ + + +LH +L+PF+
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQISGEND-------QQEVVQQLHKVLRPFL 406
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK 700
LRR+K DV L K E ++ +S Q+ +Y+A+ K
Sbjct: 407 LRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK 444
Score = 389 (142.0 bits), Expect = 8.9e-67, Sum P(3) = 8.9e-67
Identities = 86/209 (41%), Positives = 129/209 (61%)
Query: 541 AG-FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
AG F I +TS+++ + ++ RR W+Y+++DEA IK+ NS+ KT+ F+ RLL+T
Sbjct: 291 AGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLIT 350
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
GTP+QNN+ ELWALL+F++P +F S E F+EWF E+ + + +LH +L+
Sbjct: 351 GTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGEND-------QQEVVQQLHKVLR 403
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
PF+LRR+K DV L K E ++ +S Q+ +Y+A+ K L + N G E+K
Sbjct: 404 PFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK-DLEVV--NGGG---ERK- 456
Query: 720 LNLMNIVIQLRKVCNHPELFERNE-GSSY 747
L+NI +QLRK CNHP LF+ E G Y
Sbjct: 457 -RLLNIAMQLRKCCNHPYLFQGAEPGPPY 484
Score = 366 (133.9 bits), Expect = 1.0e-90, Sum P(3) = 1.0e-90
Identities = 77/143 (53%), Positives = 104/143 (72%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
PP + D L+T++GK+ LD LL +L+ + RVL+F+QMT++L+ILEDY+ YR Y+Y
Sbjct: 482 PPYTTGD--HLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYC 539
Query: 1101 RLDGSSTIMDRRDMVRDFQHR--SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1158
R+DG+ T D RD + ++ S+ FVFLLSTRAGGLGINL AD VI Y+SDWNP +D
Sbjct: 540 RIDGN-TGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVD 598
Query: 1159 LQAMDRAHRLGQTKDVSSWLKLC 1181
LQA DRAHR+GQ K+V + + C
Sbjct: 599 LQAQDRAHRIGQKKEVQVF-RFC 620
Score = 67 (28.6 bits), Expect = 1.0e-90, Sum P(3) = 1.0e-90
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSE 329
R+ +L+QQTEL++HF KS PS+
Sbjct: 122 RIKYLLQQTELFAHFA--KSDPSPSQ 145
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 626 (225.4 bits), Expect = 1.2e-90, Sum P(4) = 1.2e-90
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 722 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 781
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 782 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 834
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 835 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 894
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 895 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 953
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 1011
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1012 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1041
Score = 380 (138.8 bits), Expect = 1.2e-90, Sum P(4) = 1.2e-90
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1050 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1109
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1110 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1169
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1170 IGQQNEVRV-LRLC 1182
Score = 42 (19.8 bits), Expect = 1.2e-90, Sum P(4) = 1.2e-90
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 527 QKKDRRLAYLLQQTDEY 543
Score = 41 (19.5 bits), Expect = 1.2e-90, Sum P(4) = 1.2e-90
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 73 GTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTG 132
GTL G L AM ++ P S V + + R Q + + ++A P +L+++ G
Sbjct: 154 GTLIPGDLQAMNQPNRGPSPFSPVQLHQLRAQILAYK-----MLARGQPLPETLQLAVQG 208
Query: 133 NSSIP 137
++P
Sbjct: 209 KRTLP 213
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 626 (225.4 bits), Expect = 1.4e-90, Sum P(4) = 1.4e-90
Identities = 128/330 (38%), Positives = 202/330 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMGLGKTIQ +A + +L E K + G
Sbjct: 720 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG 779
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + + Y G +R+++ P+ R F++L+
Sbjct: 780 PYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG----TPAMRRSLVPQL---RSGKFNVLL 832
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 833 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 892
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 893 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 951
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 952 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 1009
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1010 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1039
Score = 380 (138.8 bits), Expect = 1.4e-90, Sum P(4) = 1.4e-90
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1048 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1107
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1108 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1167
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1168 IGQQNEVRV-LRLC 1180
Score = 42 (19.8 bits), Expect = 1.4e-90, Sum P(4) = 1.4e-90
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 525 QKKDRRLAYLLQQTDEY 541
Score = 40 (19.1 bits), Expect = 1.4e-90, Sum P(4) = 1.4e-90
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 92 PRSRVGMGEPRPQYESLQARLKALVASNSP 121
P+ + +PQ + Q + ALV+ N P
Sbjct: 236 PQQPQQQAQAQPQQQQQQQQQPALVSYNRP 265
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 566 (204.3 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 118/285 (41%), Positives = 180/285 (63%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
Q P+ F G ++ YQ++G++WL +E G+NGILADEMGLGKT+Q +A +A L ++ +
Sbjct: 196 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 254
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH-I 545
GPFLV P S L NW E RF P++ TL Y G ++R L KNI+ KR + H +
Sbjct: 255 GPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIH-KR--QGTLQIHPV 311
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
++TS+++ + D+ + W+Y+++DE IK+ + L FN N+LLLTGTP+QN
Sbjct: 312 VVTSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQN 371
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFM 662
N++ELW+LL+F++P +FD + F WF + AE ++ L+ LH IL PF+
Sbjct: 372 NLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFL 431
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLF 707
LRR+K DV E+ K EV+V+ L ++Q+ FY AI N+ ++A +F
Sbjct: 432 LRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNR-TIANMF 475
Score = 370 (135.3 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 74/135 (54%), Positives = 94/135 (69%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+ H+VL+F+QMT ML+IL DY + R + +
Sbjct: 566 PVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIF 625
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F D+F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 626 SRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 685
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 686 QAQDRCHRIGQTKPV 700
Score = 65 (27.9 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP + E
Sbjct: 541 LKLRNIMMLLRKCCNHPYMIE 561
Score = 48 (22.0 bits), Expect = 1.5e-90, Sum P(4) = 1.5e-90
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSE 329
+RL L++++ +YS F+ K Q E
Sbjct: 50 RRLQHLLEKSNIYSKFLLTKMEQQQLE 76
Score = 42 (19.8 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 476 LAHLAEEKNIWGPFLV 491
L HL E+ NI+ FL+
Sbjct: 52 LQHLLEKSNIYSKFLL 67
Score = 38 (18.4 bits), Expect = 1.7e-89, Sum P(4) = 1.7e-89
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 225 IDAKRFAETCQREVKMKVSRSLKLMRGAAI 254
++ ++ E ++E K RSLKL G ++
Sbjct: 70 MEQQQLEEQKKKEKLEKKKRSLKLTEGKSL 99
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 620 (223.3 bits), Expect = 1.9e-90, Sum P(3) = 1.9e-90
Identities = 125/322 (38%), Positives = 200/322 (62%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q + G+LKEYQ+KGL+WLV+ Y LNGILADEMGLGKTIQ ++ + +L + K + G
Sbjct: 764 QASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMG 823
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L NW E ++ P + + Y G Q R +L+ + R F++L+
Sbjct: 824 PYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQM-------RATKFNVLL 876
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLTGTP+QN
Sbjct: 877 TTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNK 936
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++P++F S F +WF+ + E LNE + + RLH +L+PF+
Sbjct: 937 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKV-ELNEEETILIIRRLHKVLRPFL 995
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS-RGHLNEKKILN 721
LRR+KK+V +L K E ++ C +S+ Q+ Y+ +++K L L D S +G +
Sbjct: 996 LRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVL--LTDGSEKGKHGKGGAKA 1053
Query: 722 LMNIVIQLRKVCNHPELFERNE 743
LMN ++QLRK+CNHP +F+ E
Sbjct: 1054 LMNTIVQLRKLCNHPFMFQHIE 1075
Score = 383 (139.9 bits), Expect = 1.9e-90, Sum P(3) = 1.9e-90
Identities = 71/121 (58%), Positives = 95/121 (78%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +L+A NHRVLLF QMT+ + I+EDY+ +R++ YLRLDG++ DR ++
Sbjct: 1097 SGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGEL 1156
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+R F + SD+FVFLLSTRAGGLG+NL ADTV+ ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1157 LRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNE 1216
Query: 1174 V 1174
V
Sbjct: 1217 V 1217
Score = 40 (19.1 bits), Expect = 1.9e-90, Sum P(3) = 1.9e-90
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL FL+ QT+ Y
Sbjct: 585 QKKDKRLAFLLSQTDEY 601
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 607 (218.7 bits), Expect = 7.0e-90, Sum P(3) = 7.0e-90
Identities = 130/339 (38%), Positives = 207/339 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
LK YQ+KGL+W+V+ Y LNGILADEMGLGKTIQ ++ + +L E K GP+LV+ P S
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
L+NW +E +++ P + T+ Y G R + I R F++L+T+Y+ ++ +
Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQI-------RKGAFNVLMTTYEYVIKE 645
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS--FNCRNRLLLTGTPIQNNMAELWALL 614
+ +++W+YM++DE +K+ N + +L+ F+ ++RLLLTGTP+QN + ELWALL
Sbjct: 646 KALLGKIRWKYMIIDEGHRLKNHNC-KLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALL 704
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFMLRRVKKDV 670
+F++P++F S F +WF+ + E LN+ + + RLH +L+PF+LRR+KK+V
Sbjct: 705 NFLLPSIFSSCGTFEQWFNAPFATTGEKV-ELNQEETMLIIRRLHKVLRPFLLRRLKKEV 763
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISL-AGLFDNSRGHLNEKKILNLMNIVIQL 729
S+L KTE ++ C S+ Q+ Y+ ++ + L A + +R +LMN V+ L
Sbjct: 764 ESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGAR---------SLMNTVVHL 814
Query: 730 RKVCNHPELFERNEGSSYLYF--GEIPNSLLPPPFGELE 766
RK+CNHP LF E S Y+ E+ + L G+LE
Sbjct: 815 RKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLE 853
Score = 384 (140.2 bits), Expect = 7.0e-90, Sum P(3) = 7.0e-90
Identities = 71/125 (56%), Positives = 97/125 (77%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +GKL+ LD +L +L+A HR+L+F QMT M+NI ED++N+R+Y YLRLDGS+ +
Sbjct: 845 LMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDE 904
Query: 1111 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R D++ F SD+F+F+LSTRAGGLG+NL ADTVI ++SDWNP D+QA DRAHR+G
Sbjct: 905 RGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIG 964
Query: 1170 QTKDV 1174
Q K+V
Sbjct: 965 QKKEV 969
Score = 45 (20.9 bits), Expect = 7.0e-90, Sum P(3) = 7.0e-90
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ QRL +L+QQT+ Y
Sbjct: 356 EKKDQRLVYLLQQTDEY 372
Score = 39 (18.8 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 654 LHAILKPFMLRRVKKDVISE--LTTKTE 679
L L P+ RR K+ + E +T K E
Sbjct: 242 LETALNPYAYRRTKRQSLREARVTEKLE 269
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 618 (222.6 bits), Expect = 8.3e-90, Sum P(3) = 8.3e-90
Identities = 132/337 (39%), Positives = 202/337 (59%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ L G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 750 VTEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 809
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K + GPFL++ P S L+NW E ++ P + + Y G R+ P R
Sbjct: 810 EFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGS----PAARRAFLP---ILRS 862
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D++ +++W+YM++DE +K+ + + L + + R+LLT
Sbjct: 863 GKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLT 922
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 923 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 981
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 982 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1039
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1040 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1076
Score = 377 (137.8 bits), Expect = 8.3e-90, Sum P(3) = 8.3e-90
Identities = 73/128 (57%), Positives = 96/128 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR +
Sbjct: 1091 SGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGML 1150
Query: 1115 VRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+++F S F+FLLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 1151 LKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1210
Query: 1174 VSSWLKLC 1181
V L+LC
Sbjct: 1211 VRV-LRLC 1217
Score = 42 (19.8 bits), Expect = 8.3e-90, Sum P(3) = 8.3e-90
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 562 QKKDKRLAYLLQQTDEY 578
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 613 (220.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 127/330 (38%), Positives = 199/330 (60%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
Q+ L G+LK YQL+GL+W+V+ Y LNGILADEMG GKTIQ +A + +L E K + G
Sbjct: 722 QSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLNG 781
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P+L++ P S L+NW E ++ P + Y G +R+++ P+ R F+ L+
Sbjct: 782 PYLIIVPLSTLSNWTYEFDKWAPSAVKISYKG----TPAMRRSLVPQL---RSGKFNALL 834
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNN 606
T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + R+LLTGTP+QN
Sbjct: 835 TTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNK 894
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLHAILKPFM 662
+ ELWALL+F++PT+F S F +WF+ E LNE + + RLH +L+PF+
Sbjct: 895 LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD-LNEEETILIIRRLHKVLRPFL 953
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-ILN 721
LRR+KK+V S+L K E ++ C +S+ Q+ Y+ ++ K L L D S K
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL--LTDGSEKDKKGKGGAKT 1011
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1012 LMNTIMQLRKICNHPYMFQHIEESFAEHLG 1041
Score = 380 (138.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 75/134 (55%), Positives = 97/134 (72%)
Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
A+L SGK + LD +L +LRA NHRVLLF QMT ++ I+EDY +R + YLRLDG++
Sbjct: 1050 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1109
Query: 1109 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
DR +++ F S F+FLLSTRAGGLG+NL AADTV+ ++SDWNP DLQA DRAHR
Sbjct: 1110 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR 1169
Query: 1168 LGQTKDVSSWLKLC 1181
+GQ +V L+LC
Sbjct: 1170 IGQQNEVRV-LRLC 1182
Score = 46 (21.3 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 73 GTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTG 132
GTL G L AM D+ P S V + + R Q + + ++A P +L+++ G
Sbjct: 154 GTLIPGDLQAMNQPDRGPSPFSPVQLHQLRAQILAYK-----MLARGQPLPETLQLAVQG 208
Query: 133 NSSIP 137
++P
Sbjct: 209 KRTLP 213
Score = 42 (19.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 527 QKKDRRLAYLLQQTDEY 543
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 644 (231.8 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 139/342 (40%), Positives = 210/342 (61%)
Query: 413 IDLHNPSTMPVTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 471
ID +N + + P L G+LKEYQLKGLQW+V+ + LNGILADEMGLGKTIQ
Sbjct: 756 IDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQ 815
Query: 472 AMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI 531
++ L +L E K I GPFLV+ P S + NW E ++ P +K + Y G +R V++ +I
Sbjct: 816 TISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDI 875
Query: 532 NPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLL-SF 590
R F +++T+++ ++ D+ R+KW +M++DE +K++NS +TL ++
Sbjct: 876 -------RTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNY 928
Query: 591 NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT----L 646
+ RL+LTGTP+QNN+ ELWALL+F++P +F+S + F+EWF+ A GG L
Sbjct: 929 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPF---ANTGGQDKIEL 985
Query: 647 NEHQ----LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQA-IKNKI 701
E + + RLH +L+PF+LRR+KKDV +L K E +V CK S+ Q YQ ++ +
Sbjct: 986 TEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNM 1045
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
AG D + G + I N N ++QL+K+CNHP ++E E
Sbjct: 1046 LYAG--DPANGSV-PVTIKNANNQIMQLKKICNHPFVYEEVE 1084
Score = 348 (127.6 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 64/121 (52%), Positives = 90/121 (74%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L + +A H+VL+F QMT+++NI+ED++ +R +Y+RLDG + DR D+
Sbjct: 1101 AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDL 1160
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F SD F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 1161 LKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1220
Query: 1174 V 1174
V
Sbjct: 1221 V 1221
Score = 40 (19.1 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 771 SGVRNPIEYKIPKIVHQEILQS 792
+ +++PIE K+ KI E + S
Sbjct: 1649 TAIKHPIEAKLEKIDKGEAIDS 1670
Score = 40 (19.1 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 716 EKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLP 759
EK + N + V++ + +L+++ + LY G+ N +P
Sbjct: 1014 EKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVP 1057
Score = 38 (18.4 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 102 RPQYESLQARLKALVASNS-PQKFSLKVSDTGNSSIPEGAAGS 143
RPQ + ++ + S PQ+++L+ + ++S P+ G+
Sbjct: 276 RPQTNGMDRTMQMPQSIPSQPQQYALQQQNDLSNSNPKSTGGT 318
Score = 38 (18.4 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 415 LHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNG 458
++ P T + T+Q P+ ++Y L+ L N + G
Sbjct: 274 VNRPQTNGMDRTMQMPQSIPSQPQQYALQQQNDLSNSNPKSTGG 317
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 644 (231.8 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 139/342 (40%), Positives = 210/342 (61%)
Query: 413 IDLHNPSTMPVTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 471
ID +N + + P L G+LKEYQLKGLQW+V+ + LNGILADEMGLGKTIQ
Sbjct: 756 IDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQ 815
Query: 472 AMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI 531
++ L +L E K I GPFLV+ P S + NW E ++ P +K + Y G +R V++ +I
Sbjct: 816 TISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDI 875
Query: 532 NPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLL-SF 590
R F +++T+++ ++ D+ R+KW +M++DE +K++NS +TL ++
Sbjct: 876 -------RTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNY 928
Query: 591 NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT----L 646
+ RL+LTGTP+QNN+ ELWALL+F++P +F+S + F+EWF+ A GG L
Sbjct: 929 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPF---ANTGGQDKIEL 985
Query: 647 NEHQ----LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQA-IKNKI 701
E + + RLH +L+PF+LRR+KKDV +L K E +V CK S+ Q YQ ++ +
Sbjct: 986 TEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNM 1045
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
AG D + G + I N N ++QL+K+CNHP ++E E
Sbjct: 1046 LYAG--DPANGSV-PVTIKNANNQIMQLKKICNHPFVYEEVE 1084
Score = 348 (127.6 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 64/121 (52%), Positives = 90/121 (74%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L + +A H+VL+F QMT+++NI+ED++ +R +Y+RLDG + DR D+
Sbjct: 1101 AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDL 1160
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F SD F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 1161 LKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1220
Query: 1174 V 1174
V
Sbjct: 1221 V 1221
Score = 40 (19.1 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 771 SGVRNPIEYKIPKIVHQEILQS 792
+ +++PIE K+ KI E + S
Sbjct: 1649 TAIKHPIEAKLEKIDKGEAIDS 1670
Score = 40 (19.1 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 716 EKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLP 759
EK + N + V++ + +L+++ + LY G+ N +P
Sbjct: 1014 EKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVP 1057
Score = 38 (18.4 bits), Expect = 3.4e-89, Sum P(3) = 3.4e-89
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 102 RPQYESLQARLKALVASNS-PQKFSLKVSDTGNSSIPEGAAGS 143
RPQ + ++ + S PQ+++L+ + ++S P+ G+
Sbjct: 276 RPQTNGMDRTMQMPQSIPSQPQQYALQQQNDLSNSNPKSTGGT 318
Score = 38 (18.4 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 415 LHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNG 458
++ P T + T+Q P+ ++Y L+ L N + G
Sbjct: 274 VNRPQTNGMDRTMQMPQSIPSQPQQYALQQQNDLSNSNPKSTGG 317
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 627 (225.8 bits), Expect = 5.6e-89, Sum P(3) = 5.6e-89
Identities = 134/337 (39%), Positives = 203/337 (60%)
Query: 423 VTSTV--QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT V Q+ + G LK+YQ+KGL+WLV+ Y LNGILADEMGLGKTIQ +A + +L
Sbjct: 730 VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
E K I GPFL++ P S L+NWA E ++ P + + Y G R+ P+ R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS----PAARRAFVPQL---RS 842
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F++L+T+Y+ ++ D+ +++W+YM++DE +K+ + + L + + RLLLT
Sbjct: 843 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 902
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ----LNRLH 655
GTP+QN + ELWALL+F++PT+F S F +WF+ E LNE + + RLH
Sbjct: 903 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVD-LNEEETILIIRRLH 961
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRR+KK+V ++L K E ++ C +S+ Q+ Y+ ++ K L L D S
Sbjct: 962 KVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVL--LTDGSEKDKK 1019
Query: 716 EKK-ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
K LMN ++QLRK+CNHP +F+ E S + G
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1056
Score = 359 (131.4 bits), Expect = 5.6e-89, Sum P(3) = 5.6e-89
Identities = 71/127 (55%), Positives = 91/127 (71%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +LRA NH+VLLF QMT ++ I+EDY YR ++YLRLDG++ DR M
Sbjct: 1071 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDR-GM 1129
Query: 1115 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+ F + LLSTRAGGLG+NL +ADTVI ++SDWNP DLQA DRAHR+GQ +V
Sbjct: 1130 LLTFNEPGSEYFILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1189
Query: 1175 SSWLKLC 1181
L+LC
Sbjct: 1190 RV-LRLC 1195
Score = 42 (19.8 bits), Expect = 5.6e-89, Sum P(3) = 5.6e-89
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ +RL +L+QQT+ Y
Sbjct: 536 QKKDKRLAYLLQQTDEY 552
Score = 38 (18.4 bits), Expect = 1.5e-88, Sum P(3) = 1.5e-88
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 QRSILSEGGILQVYYVKVLE 164
++S L G+L+ Y +K LE
Sbjct: 736 KQSALMVNGVLKQYQIKGLE 755
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 567 (204.7 bits), Expect = 8.4e-89, Sum P(3) = 8.4e-89
Identities = 115/299 (38%), Positives = 185/299 (61%)
Query: 428 QTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
++P KG +L++YQ++GL W+++ YE G+NGILADEMGLGKT+Q +A L +L +NI
Sbjct: 97 ESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 156
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GP +V+ P S L+NW +E R+ P L+ + G R +++ + +
Sbjct: 157 GPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------MMPGEWDVC 210
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 211 VTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 270
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 271 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 322
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNLM 723
+K +V L K EV ++ LS Q+ +Y I K I + NS G +++ ++LN++
Sbjct: 323 IKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDIL----NSAGKMDKMRLLNIL 377
Score = 393 (143.4 bits), Expect = 6.4e-69, Sum P(3) = 6.4e-69
Identities = 84/206 (40%), Positives = 129/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 209 VCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 268
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 269 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 320
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K +V L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 321 RRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 373
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 374 LNILMQLRKCCNHPYLFDGAEPGPPY 399
Score = 371 (135.7 bits), Expect = 8.4e-89, Sum P(3) = 8.4e-89
Identities = 78/143 (54%), Positives = 99/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +LR + RVLLF+QMT++L+ILEDY
Sbjct: 388 YLFDGAEPGPPYTTD-THLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYC 446
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R + + F S F+F+LSTRAGGLGINL AD VI Y+S
Sbjct: 447 MWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDS 506
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 507 DWNPQVDLQAMDRAHRIGQKKPV 529
Score = 76 (31.8 bits), Expect = 8.4e-89, Sum P(3) = 8.4e-89
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L V +P
Sbjct: 17 KRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRP 52
Score = 38 (18.4 bits), Expect = 6.7e-54, Sum P(3) = 6.7e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 705 PPRLFELLEKEILYYRKTIGYKVPR 729
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 575 (207.5 bits), Expect = 4.6e-88, Sum P(3) = 4.6e-88
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 395 (144.1 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 360 (131.8 bits), Expect = 4.6e-88, Sum P(3) = 4.6e-88
Identities = 74/143 (51%), Positives = 100/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R + + F S F+F+LSTRAGGLGINL +AD VI Y+S
Sbjct: 526 MWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDS 585
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 586 DWNPQVDLQAMDRAHRIGQKKPV 608
Score = 75 (31.5 bits), Expect = 4.6e-88, Sum P(3) = 4.6e-88
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNIKLGRP 131
Score = 38 (18.4 bits), Expect = 2.6e-54, Sum P(3) = 2.6e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 784 PPRLFELLEKEILYYRKTIGYKVPR 808
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 601 (216.6 bits), Expect = 5.8e-88, Sum P(3) = 5.8e-88
Identities = 144/392 (36%), Positives = 218/392 (55%)
Query: 381 LTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDL-----HNPSTMPVTS-----TVQTP 430
+++ F+ E + ++D E L+V+ G+G ID + S + + + V P
Sbjct: 762 ISSNFENESDESMNSSDRE---LEVN--GNGKIDKIASTDEDDSNVEIVNGSKVKDVPIP 816
Query: 431 ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL 490
L +G+L+ YQ +GL WL + Y NGILADEMGLGKTIQ ++ LA+LA E + WGP L
Sbjct: 817 SLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHL 876
Query: 491 VVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSY 550
++ P SV+ NW E +F P K L Y+G Q+R RK N + DA FH+ ITSY
Sbjct: 877 IIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWN-----KPDA-FHVCITSY 930
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
QL+V D++ F+R +W YM+LDEA IK+ S RW+ LL+FN NRLLLTGTP+QNN+ EL
Sbjct: 931 QLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMEL 990
Query: 611 WALLHFIMPTL---------FDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
W+LL+F+MP+ F + + F +WF K + E N ++ +
Sbjct: 991 WSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQK- 1049
Query: 662 MLRRVKKDVISEL--TTKTEVMVHCKLSSRQQA---FYQAIKNKISLAG--LFDN--SRG 712
+ ++ ++ L + ++ K +Q + + ++S L+D+ SR
Sbjct: 1050 -MDEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRA 1108
Query: 713 HLNEK----KILNLMNIVIQLRKVCNHPELFE 740
E L+++N ++QLRKVCNHP+LFE
Sbjct: 1109 KTKETLASGNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 375 (137.1 bits), Expect = 5.8e-88, Sum P(3) = 5.8e-88
Identities = 72/128 (56%), Positives = 91/128 (71%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
D L D GKLQ L LL+ L ++ HR L+F QMTK+L+ILE ++N YRY+RLDG++
Sbjct: 1357 DKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGAT 1416
Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
I DR+ + F I VF+LSTR+GGLGINLT ADTVIFY+SDWNP +D Q DR H
Sbjct: 1417 KIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1476
Query: 1167 RLGQTKDV 1174
R+GQ +DV
Sbjct: 1477 RIGQVRDV 1484
Score = 45 (20.9 bits), Expect = 5.8e-88, Sum P(3) = 5.8e-88
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 897 NHPDRGKVRA-VTRLLL---IPS--RSETNLLRRKF 926
NHPD +VR VT + IPS +S L++R+F
Sbjct: 1134 NHPDLFEVRPIVTSFAMPRSIPSYYQSTNELVKRQF 1169
Score = 38 (18.4 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 728 QLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDIS 769
+L+K+ L E E S+ L ++ +S P E +D S
Sbjct: 515 ELKKIKGRQHLSEMLEHSTQLLEAQLTSSREPTVEAESDDNS 556
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 613 (220.8 bits), Expect = 6.7e-88, Sum P(4) = 6.7e-88
Identities = 138/338 (40%), Positives = 200/338 (59%)
Query: 373 NAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPEL 432
NA +K +N+ D E S ++ + ++ D N D + P + ++ P L
Sbjct: 160 NANTKDN--SNSDDEEHSS-KKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRL 216
Query: 433 FKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 491
K LK YQL+GL WL+ YE GLNGILADEMGLGKT+Q++A LA + E + GPFLV
Sbjct: 217 LKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYE-MDTKGPFLV 275
Query: 492 VAPASVLNNWADEISRFCPDLKTLPYWG--GLQERMVLRKNINPKRLYRRDAGFHILITS 549
AP S L+NW +E ++F PDL L Y+G G +ER KN +++ G I+ITS
Sbjct: 276 TAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNF-----FKQHGGTGIVITS 330
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
Y++++ D W+++++DE +K+ N K L N NRLLLTGTP+QNN+AE
Sbjct: 331 YEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAE 390
Query: 610 LWALLHFIMPTLFDSHEQFNEWFS-------KGIESHAEH---GGTLNEHQLNRLHAILK 659
LW+LL+FIMP +F E FN+WF G S A + L ++ ++ LH ILK
Sbjct: 391 LWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILK 450
Query: 660 PFMLRRVKKDVISE-LTTKTEVMVHCKLSSRQQAFYQA 696
PF+LRR+KK V++ L K E +++C ++S Q+ FY+A
Sbjct: 451 PFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKA 488
Score = 313 (115.2 bits), Expect = 6.7e-88, Sum P(4) = 6.7e-88
Identities = 63/132 (47%), Positives = 86/132 (65%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
LL SGKLQ L L+ L +E H+VL+++Q ML+++ED+ + + R+DGS
Sbjct: 598 LLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNET 657
Query: 1111 RRDMVRDFQHRSDIF-VFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+D + F D +FLLSTRA GLGINL ADTV+ ++SDWNP +DLQAMDR HR+G
Sbjct: 658 RKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIG 717
Query: 1170 QTKDVSSWLKLC 1181
Q V + +LC
Sbjct: 718 QESPVIVY-RLC 728
Score = 41 (19.5 bits), Expect = 6.7e-88, Sum P(4) = 6.7e-88
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPN 339
++LN ++Q+++YS + + + +EV N K N
Sbjct: 131 KKLNEFVRQSQVYSSIIADTLLHRSNEVANA-NTKDN 166
Score = 39 (18.8 bits), Expect = 6.7e-88, Sum P(4) = 6.7e-88
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 709 NSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
N + ++ KK+ N+M +QLR++ + LF
Sbjct: 556 NLQMEISNKKLQNMM---MQLRQIIDSTFLF 583
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 637 (229.3 bits), Expect = 7.1e-88, Sum P(3) = 7.1e-88
Identities = 134/324 (41%), Positives = 198/324 (61%)
Query: 427 VQTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
++ P L +G LK YQ++GLQW+V+ Y LNGILADEMGLGKTIQ +A +++L E K
Sbjct: 1700 IEQPALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKN 1759
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFH 544
GPFLVV P S L+NW E S++ P +K + Y+G R + I P + F+
Sbjct: 1760 NGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIAPGQ-------FN 1812
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLL--SFNCRNRLLLTGTP 602
++T+Y+ ++ D+ ++KW Y+++DE +K+ S + +L S++ R RLLLTGTP
Sbjct: 1813 AVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTS-KLSIILGTSYSSRYRLLLTGTP 1871
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL---NRLHAILK 659
+QN++ ELWALL+F++PT+FD E F +WF+ E E QL RLH +L+
Sbjct: 1872 LQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLR 1931
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
PF+LRR+KK+V ++L K E ++ C +S+ Q Y IK K ++ L + N K
Sbjct: 1932 PFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTK-GVSKLASSGGADGNPKLA 1990
Query: 720 LNLMNIVIQLRKVCNHPELFERNE 743
L N +QLRK+CNHP LF +E
Sbjct: 1991 KGLKNTYVQLRKICNHPYLFYDDE 2014
Score = 349 (127.9 bits), Expect = 7.1e-88, Sum P(3) = 7.1e-88
Identities = 67/125 (53%), Positives = 93/125 (74%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +GK LD LL +L+A HRVL+F+QMT+++NILE + Y+ Y++LRLDGS+ +
Sbjct: 2021 LIRYAGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDE 2080
Query: 1111 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R ++ F S+ F+F+LSTRAGGLG+NL ADTVI ++SDWNP +DLQA DRAHR+G
Sbjct: 2081 RGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIG 2140
Query: 1170 QTKDV 1174
Q + V
Sbjct: 2141 QKQTV 2145
Score = 45 (20.9 bits), Expect = 7.1e-88, Sum P(3) = 7.1e-88
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQ 326
++QQQ+ + L+QQ + +Q + Q
Sbjct: 180 QQQQQQYHLLLQQQQQQQQLLQQQQQQQ 207
Score = 43 (20.2 bits), Expect = 1.9e-86, Sum P(4) = 1.9e-86
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQPSEV 330
++QQQ+ +QQ E Q +S QP +V
Sbjct: 1025 QQQQQQQQEHLQQPENLQPQPQQQSQQQPEQV 1056
Score = 42 (19.8 bits), Expect = 1.5e-87, Sum P(3) = 1.5e-87
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQ 326
++ Q + N QQ + + HF QN++ +Q
Sbjct: 527 QQHQHQQNQQFQQPQ-HQHFNQNQNQNQ 553
Score = 42 (19.8 bits), Expect = 1.5e-87, Sum P(3) = 1.5e-87
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 301 QQQRLNFLIQQTELYSHFMQNKS---SSQPSEVLP 332
QQQ FL Q + + H Q++ QP + P
Sbjct: 401 QQQPQQFLQPQQQYHQHHQQHQQHQHQQQPQQQQP 435
Score = 41 (19.5 bits), Expect = 1.9e-87, Sum P(3) = 1.9e-87
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPN 339
+ QQQ +QQ + H Q ++ + P P+ + PN
Sbjct: 137 QHQQQHQQQQLQQQQQQHHHQQQQNINTP----PMNINSPN 173
Score = 41 (19.5 bits), Expect = 2.4e-54, Sum P(4) = 2.4e-54
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 1111 RRDMVRDFQHRSDIFVFLLSTR 1132
R D + + RSDIFV L S R
Sbjct: 2557 RADQDEEGRKRSDIFVKLPSKR 2578
Score = 38 (18.4 bits), Expect = 1.9e-86, Sum P(4) = 1.9e-86
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 167 ETYEIIERALPXXXXXXXDPSVIE 190
E Y I++ A P PSV++
Sbjct: 635 EYYGILQLAHPSTFINQSSPSVVQ 658
Score = 37 (18.1 bits), Expect = 4.9e-87, Sum P(3) = 4.9e-87
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 302 QQRLNFLIQQTELYSHFMQNK 322
Q++L+ + Q Y FMQ K
Sbjct: 610 QEQLDVIRAQVYAYKCFMQRK 630
Score = 37 (18.1 bits), Expect = 8.0e-86, Sum P(4) = 8.0e-86
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 301 QQQRLNFLIQQTELYSHFMQNKSSSQP 327
QQQ+ L QQ + +Q + QP
Sbjct: 1017 QQQQPEHLQQQQQQQQEHLQQPENLQP 1043
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 618 (222.6 bits), Expect = 8.1e-88, Sum P(2) = 8.1e-88
Identities = 131/326 (40%), Positives = 195/326 (59%)
Query: 426 TVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
T Q L G+LKEYQ+KGLQW+++ Y LNGILADEMGLGKTIQ ++ + H+ E K
Sbjct: 526 TEQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIERKRN 585
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
GPFLV+ P S L NW E ++ P + + Y G R ++NI R F +
Sbjct: 586 NGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQQQQNI-------RWGNFQV 638
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF-NCRNRLLLTGTPIQ 604
L+T+Y+ ++ D ++KW +M++DE +K++ S TL + R RL+LTGTP+Q
Sbjct: 639 LLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQ 698
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHA--EHGGTLNEHQL---NRLHAILK 659
NN+ ELWALL+F++P +F S + F+EWF+ + + E QL RLH +L+
Sbjct: 699 NNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLR 758
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQ--AIKNKISLAGLFDNSRGHLNEK 717
PF+LRR+KKDV +L K E ++ C+ S+ Q + A NK+ ++ D G + +
Sbjct: 759 PFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNKMVVS---DGKGGKVGMR 815
Query: 718 KILNLMNIVIQLRKVCNHPELFERNE 743
L N+++QLRK+CNHP +FE+ E
Sbjct: 816 ---GLSNMLMQLRKLCNHPFVFEQVE 838
Score = 348 (127.6 bits), Expect = 8.1e-88, Sum P(2) = 8.1e-88
Identities = 67/121 (55%), Positives = 90/121 (74%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L + +A HRVL+F QMT+++NI+ED++ R +YLRLDGS+ DR D+
Sbjct: 855 AGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDL 914
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F S+ F FLLSTRAGGLG+NL ADTVI ++SDWNP DLQA DRAHR+GQ +
Sbjct: 915 LKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 974
Query: 1174 V 1174
V
Sbjct: 975 V 975
Score = 43 (20.2 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 21/88 (23%), Positives = 35/88 (39%)
Query: 780 KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
+IP V Q++ S ++ A ++ + + FS Q+ A+ +D S K
Sbjct: 162 QIPPRVQQQLFMSKKVTTPAPSDNVA--VAESVLEKFSQGKPEQA----AATADVSNAKE 215
Query: 840 ETFGFTHLMDLSPAEVAFLAKGSFMERL 867
F DL P V+F S R+
Sbjct: 216 FYEHFQSPYDLIPKTVSFTDHASRSHRM 243
Score = 40 (19.1 bits), Expect = 7.1e-26, Sum P(2) = 7.1e-26
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 569 VLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
V D+ + +N + W+T F +R+L
Sbjct: 837 VEDQVNPGRGTNDLIWRTAGKFELLDRIL 865
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 564 (203.6 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 116/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 161 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 220
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E R+ P L+++ G ++R +++ L
Sbjct: 221 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV----LL 276
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 277 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 386
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 387 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 442
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 443 KMRLLNIL 450
Score = 391 (142.7 bits), Expect = 1.1e-67, Sum P(4) = 1.1e-67
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 393
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 446
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPY 472
Score = 375 (137.1 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 78/143 (54%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 461 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 519
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+D + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 520 MWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 579
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 580 DWNPQVDLQAMDRAHRIGQTKTV 602
Score = 69 (29.3 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 91 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 125
Score = 41 (19.5 bits), Expect = 1.2e-87, Sum P(4) = 1.2e-87
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 101 PRPQYESLQARLKALVASNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILSEG 152
P P ES ++ A +AS S++ N PEG A S S G
Sbjct: 9 PPPPPESAPSKPAASIASGG--------SNSSNKGGPEGVAAQAVASAASAG 52
Score = 38 (18.4 bits), Expect = 1.6e-52, Sum P(4) = 1.6e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 778 PPRLFELLEKEILFYRKTIGYKVPR 802
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 619 (223.0 bits), Expect = 1.9e-87, Sum P(3) = 1.9e-87
Identities = 127/314 (40%), Positives = 191/314 (60%)
Query: 430 PELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
P L +G L+ YQL+GLQW+V+ Y NGILADEMGLGKTIQ +A +A+L E K++ GP
Sbjct: 378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 437
Query: 489 FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILIT 548
L++AP +VL NW +E + + P + Y G ++R +R I + F++LIT
Sbjct: 438 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGGK-------FNVLIT 490
Query: 549 SYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTL-LSFNCRNRLLLTGTPIQNNM 607
Y L++ D+ + +++ W YM++DE +K+ KTL + + RLLLTGTPIQN++
Sbjct: 491 HYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSL 550
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL--NRLHAILKPFMLRR 665
ELW+LL+F++P +F+S F EWF+ T E L NRLH +++PF+LRR
Sbjct: 551 QELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRR 610
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNI 725
K +V L KT+V++ C +S+ Q+ +Y+ + + + GL H K +L N+
Sbjct: 611 KKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTD-VGRVGL------HSGNGKSKSLQNL 663
Query: 726 VIQLRKVCNHPELF 739
+QLRK CNHP LF
Sbjct: 664 TMQLRKCCNHPYLF 677
Score = 342 (125.4 bits), Expect = 1.9e-87, Sum P(3) = 1.9e-87
Identities = 65/126 (51%), Positives = 92/126 (73%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
+++ SGK + LD LL +L+ HR+LLF+QMT+++++LE Y++ Y YLRLDGS+
Sbjct: 689 EIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTD 748
Query: 1110 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1168
R +++ F S F+FLLSTRAGGLG+NL ADT+I ++SDWNP +D QA DRAHR+
Sbjct: 749 QRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRI 808
Query: 1169 GQTKDV 1174
GQ K+V
Sbjct: 809 GQKKEV 814
Score = 38 (18.4 bits), Expect = 1.9e-87, Sum P(3) = 1.9e-87
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 235 QREVKMKVSRSLKLMRGA 252
QR+ K+S + KL++G+
Sbjct: 306 QRQKDAKLSENTKLLKGS 323
Score = 37 (18.1 bits), Expect = 1.7e-55, Sum P(3) = 1.7e-55
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 1105 SSTIMDRRDMVRDFQHR--SDIFVFLLSTRAGGLGINLTAADTVIFYESDWN-PTLDLQA 1161
+ST DRR+M+ + + S + + S R IN AA T E W +D +
Sbjct: 852 TSTAQDRREMLEEIMSKGTSSLGEDVPSERE----INRLAARTE---EEFWMFEQMDEER 904
Query: 1162 MDRAH---RLGQTKDVSSW 1177
+ + RL + K+V W
Sbjct: 905 RKKENYKTRLMEEKEVPEW 923
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 564 (203.6 bits), Expect = 1.9e-87, Sum P(4) = 1.9e-87
Identities = 116/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 160 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 219
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E R+ P L+++ G ++R +++ L
Sbjct: 220 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV----LL 275
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 276 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 333
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 334 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 385
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 386 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 441
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 442 KMRLLNIL 449
Score = 391 (142.7 bits), Expect = 1.7e-67, Sum P(4) = 1.7e-67
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 340
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 341 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 392
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 393 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 445
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 446 LNILMQLRKCCNHPYLFDGAEPGPPY 471
Score = 375 (137.1 bits), Expect = 1.9e-87, Sum P(4) = 1.9e-87
Identities = 78/143 (54%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 460 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 518
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+D + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 519 MWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 578
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 579 DWNPQVDLQAMDRAHRIGQTKTV 601
Score = 69 (29.3 bits), Expect = 1.9e-87, Sum P(4) = 1.9e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 90 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 124
Score = 39 (18.8 bits), Expect = 1.9e-87, Sum P(4) = 1.9e-87
Identities = 11/36 (30%), Positives = 13/36 (36%)
Query: 117 ASNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILSEG 152
A + P S +GN PEG A S G
Sbjct: 16 APSKPSAAGAGGSSSGNKGGPEGGAAPAAPSATGAG 51
Score = 38 (18.4 bits), Expect = 2.6e-52, Sum P(4) = 2.6e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 777 PPRLFELLEKEILYYRKTIGYKVPR 801
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 648 (233.2 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 140/347 (40%), Positives = 214/347 (61%)
Query: 410 SGNIDLHNPSTMPVTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGK 468
+ N+D +N + + P L G+LK+YQ+KGLQW+V+ + LNGILADEMGLGK
Sbjct: 739 NSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGK 798
Query: 469 TIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLR 528
TIQ ++ L +L E KNI GP+LV+ P S L+NW+ E +++ P L+T+ + G ER +
Sbjct: 799 TIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQ 858
Query: 529 KNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLL 588
I R F +++T+++ ++ + +VKW +M++DE +K++ S TL
Sbjct: 859 AKI-------RAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLN 911
Query: 589 S-FNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT-- 645
+ ++ RL+LTGTP+QNN+ ELWALL+F++P +F+S + F+EWF+ A GG
Sbjct: 912 THYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPF---ANTGGQDK 968
Query: 646 --LNEHQ----LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKN 699
L+E + + RLH +L+PF+LRR+KKDV EL K E +V CK+S+ QQ YQ +
Sbjct: 969 IELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQM-- 1026
Query: 700 KISLAGLFDNSRGHLNEKKILNLM---NIVIQLRKVCNHPELFERNE 743
+ LF G N KK++ L N ++QL+K+CNHP +FE E
Sbjct: 1027 -LKYRRLFI---GDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVE 1069
Score = 328 (120.5 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 62/121 (51%), Positives = 89/121 (73%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L +L+A HRVL+F QMT++++I+ED++ Y +YLRLDG + +R ++
Sbjct: 1086 AGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSEL 1145
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+R F S+ F+LSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 1146 LRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1205
Query: 1174 V 1174
V
Sbjct: 1206 V 1206
Score = 37 (18.1 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 128 VSDTGNSSIPEGAAGSIQRSILSEGG--ILQVYYVKVLEKGETYEIIERALP 177
VS G SS+ G++ ++ + G I Q K E+ ET + + P
Sbjct: 357 VSPAGPSSVHNAKNGTLDKNSQTVSGTPITQTESKK--EENETISNVAKTAP 406
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 564 (203.6 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 116/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 161 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 220
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E R+ P L+++ G ++R +++ L
Sbjct: 221 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV----LL 276
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 277 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 386
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 387 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 442
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 443 KMRLLNIL 450
Score = 391 (142.7 bits), Expect = 8.8e-68, Sum P(3) = 8.8e-68
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 393
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 446
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPY 472
Score = 371 (135.7 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 77/143 (53%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 461 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 519
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R++ + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 520 MWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 579
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 580 DWNPQVDLQAMDRAHRIGQTKTV 602
Score = 69 (29.3 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 91 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 125
Score = 38 (18.4 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 778 PPRLFELLEKEILYYRKTIGYKVPR 802
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 564 (203.6 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 116/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 161 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 220
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E R+ P L+++ G ++R +++ L
Sbjct: 221 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV----LL 276
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 277 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 386
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 387 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 442
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 443 KMRLLNIL 450
Score = 391 (142.7 bits), Expect = 8.8e-68, Sum P(3) = 8.8e-68
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 393
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 446
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPY 472
Score = 371 (135.7 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 77/143 (53%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 461 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 519
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R++ + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 520 MWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 579
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 580 DWNPQVDLQAMDRAHRIGQTKTV 602
Score = 69 (29.3 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 91 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 125
Score = 38 (18.4 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 778 PPRLFELLEKEILYYRKTIGYKVPR 802
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 574 (207.1 bits), Expect = 3.5e-87, Sum P(3) = 3.5e-87
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 178 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 237
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 238 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGE-------WDVC 290
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 291 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 350
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 351 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 402
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 403 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDKMRLLNIL 457
Score = 395 (144.1 bits), Expect = 7.1e-67, Sum P(3) = 7.1e-67
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 289 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 348
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 349 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 400
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 401 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDK---MRLL 454
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 455 NILMQLRKCCNHPYLFDGAEPGPPY 479
Score = 355 (130.0 bits), Expect = 3.5e-87, Sum P(3) = 3.5e-87
Identities = 74/143 (51%), Positives = 99/143 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++ +SGK+ LD LL R++ + RVL+F+QMT++L+ILEDY
Sbjct: 468 YLFDGAEPGPPYTTDE-HIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYC 526
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R + + F S F+F+LSTRAGGLGINL +AD VI Y+S
Sbjct: 527 MWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDS 586
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 587 DWNPQVDLQAMDRAHRIGQKKPV 609
Score = 72 (30.4 bits), Expect = 3.5e-87, Sum P(3) = 3.5e-87
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 97 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARP 132
Score = 38 (18.4 bits), Expect = 5.8e-54, Sum P(3) = 5.8e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 785 PPRLFELLEKEILYYRKTIGYKVPR 809
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 564 (203.6 bits), Expect = 6.6e-87, Sum P(4) = 6.6e-87
Identities = 116/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 161 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 220
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E R+ P L+++ G ++R +++ L
Sbjct: 221 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV----LL 276
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 277 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 334
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 335 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 386
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 387 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 442
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 443 KMRLLNIL 450
Score = 391 (142.7 bits), Expect = 5.8e-67, Sum P(4) = 5.8e-67
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 341
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 393
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 446
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPY 472
Score = 371 (135.7 bits), Expect = 6.6e-87, Sum P(4) = 6.6e-87
Identities = 77/143 (53%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 461 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 519
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R++ + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 520 MWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 579
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 580 DWNPQVDLQAMDRAHRIGQTKTV 602
Score = 69 (29.3 bits), Expect = 6.6e-87, Sum P(4) = 6.6e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 91 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 125
Score = 38 (18.4 bits), Expect = 6.6e-87, Sum P(4) = 6.6e-87
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 128 VSDTGNSSIPEGAAGSIQRSILSEG 152
VS++ N PEG A S G
Sbjct: 28 VSNSSNKGGPEGVAAQATPSAAGSG 52
Score = 38 (18.4 bits), Expect = 3.3e-52, Sum P(4) = 3.3e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 778 PPRLFELLEKEILYYRKTIGYKVPR 802
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 561 (202.5 bits), Expect = 7.2e-87, Sum P(4) = 7.2e-87
Identities = 115/308 (37%), Positives = 189/308 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 160 ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 219
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW E ++ P L+++ G ++R +++ L
Sbjct: 220 YMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDV----LL 275
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 276 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 333
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH
Sbjct: 334 LTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHM 385
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G ++
Sbjct: 386 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMD 441
Query: 716 EKKILNLM 723
+ ++LN++
Sbjct: 442 KMRLLNIL 449
Score = 391 (142.7 bits), Expect = 2.8e-67, Sum P(4) = 2.8e-67
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 340
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 341 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQKLVERLHMVLRPFLL 392
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 393 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 445
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 446 LNILMQLRKCCNHPYLFDGAEPGPPY 471
Score = 375 (137.1 bits), Expect = 7.2e-87, Sum P(4) = 7.2e-87
Identities = 78/143 (54%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 460 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 518
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+D + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 519 MWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 578
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 579 DWNPQVDLQAMDRAHRIGQTKTV 601
Score = 69 (29.3 bits), Expect = 7.2e-87, Sum P(4) = 7.2e-87
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 90 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 124
Score = 38 (18.4 bits), Expect = 9.4e-52, Sum P(4) = 9.4e-52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 777 PPRLFELLEKEILYYRKTIGYKVPR 801
Score = 37 (18.1 bits), Expect = 7.2e-87, Sum P(4) = 7.2e-87
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 117 ASNSPQKFSLKVSDTGNSSIPEGAA 141
A + P S +GN PEG A
Sbjct: 16 APSKPSAAGAGGSSSGNKGGPEGGA 40
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 572 (206.4 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 120/312 (38%), Positives = 188/312 (60%)
Query: 416 HNPSTMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
++ +T T +P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++
Sbjct: 141 NSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIS 200
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINP 533
L ++ +NI GP +V+ P S L NW +E R+ P LK + G +ER +R + P
Sbjct: 201 LLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLP 260
Query: 534 KRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCR 593
+ + +TSY++L+ + F++ W+Y+V+DEA IK+ S + + F
Sbjct: 261 GE-------WDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT 313
Query: 594 NRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-N 652
NRLLLTGTP+QNN+ ELWALL+F++P +F+S E F+ WF + L + +L
Sbjct: 314 NRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWF--------DTNNCLGDTKLVE 365
Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSR 711
RLH +L+PF+LRR+K DV L K E+ ++ LS Q+ +Y I K I + NS
Sbjct: 366 RLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDIL----NSA 421
Query: 712 GHLNEKKILNLM 723
G +++ ++LN++
Sbjct: 422 GKMDKMRLLNVL 433
Score = 392 (143.0 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 83/206 (40%), Positives = 127/206 (61%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ + F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 265 VCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 324
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S E F+ WF + L + +L RLH +L+PF+L
Sbjct: 325 NNLHELWALLNFLLPDVFNSSEDFDAWF--------DTNNCLGDTKLVERLHTVLRPFLL 376
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K E+ ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 377 RRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDIL----NSAGKMDK---MRL 429
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+N+++QLRK CNHP LF+ E G Y
Sbjct: 430 LNVLMQLRKCCNHPYLFDGAEPGPPY 455
Score = 356 (130.4 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 75/143 (52%), Positives = 98/143 (68%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+ +SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 444 YLFDGAEPGPPYTTD-LHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 502
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+ + F S F+F+LSTRAGGLGINL AD VI Y+S
Sbjct: 503 MWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDS 562
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 563 DWNPQVDLQAMDRAHRIGQKKQV 585
Score = 66 (28.3 bits), Expect = 1.8e-86, Sum P(3) = 1.8e-86
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTE+++HF+Q + P+ L + +P
Sbjct: 74 RFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRP 108
Score = 39 (18.8 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSEI 795
PP EL + R I YK+P+ + ++ S+E+
Sbjct: 760 PPRLFELLEKEILYYRKTIGYKVPR--NPDLPNSAEM 794
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 624 (224.7 bits), Expect = 2.1e-86, Sum P(3) = 2.1e-86
Identities = 130/320 (40%), Positives = 195/320 (60%)
Query: 432 LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 491
L G+LKEYQL+GL+W+V+ Y LNGILADEMGLGKTIQ+++ + +L E K GPFLV
Sbjct: 465 LVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLV 524
Query: 492 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQ 551
+ P S + NW E ++ P L T+ Y G +R L+ I R F +L+T+Y+
Sbjct: 525 IVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQI-------RVGNFDVLLTTYE 577
Query: 552 LLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF-NCRNRLLLTGTPIQNNMAEL 610
++ D+ + W +M++DE +K++ S T+ + RNRL+LTGTP+QNN+ EL
Sbjct: 578 YIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPEL 637
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGI-ESHAEHGGTLNEHQ----LNRLHAILKPFMLRR 665
WALL+F++P +F+S + F +WF+ + + L E + + RLH +L+PF+LRR
Sbjct: 638 WALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRR 697
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQA-IKNKISLAGLFDNSRGHLNEKKILNLMN 724
+KK+V +L K E ++ CKLS QQ YQ +K+ G + G + I L N
Sbjct: 698 LKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGA--GTEG-ATKGGIKGLNN 754
Query: 725 IVIQLRKVCNHPELFERNEG 744
++QLRK+CNHP +F+ EG
Sbjct: 755 KIMQLRKICNHPFVFDEVEG 774
Score = 337 (123.7 bits), Expect = 2.1e-86, Sum P(3) = 2.1e-86
Identities = 63/121 (52%), Positives = 89/121 (73%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
+GK + LD +L + +A HRVL+F QMT++++I+ED++ + +Y+RLDGS+ +R +M
Sbjct: 790 AGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEM 849
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+ F SD F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 850 LNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 909
Query: 1174 V 1174
V
Sbjct: 910 V 910
Score = 39 (18.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 47 LSYDKLAPSLNLPSFSDIQVEEFYLKGTLDLGSLAAMM 84
L ++K APSLN + + L+ + +G+ ++
Sbjct: 536 LEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVLL 573
Score = 39 (18.8 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI 531
++NN A + P L+ P+ Q + +R +
Sbjct: 261 LINNVASQAHHNIPYLRDSPFTAAAQRSVQIRSKV 295
Score = 38 (18.4 bits), Expect = 2.1e-86, Sum P(3) = 2.1e-86
Identities = 8/42 (19%), Positives = 21/42 (50%)
Query: 71 LKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARL 112
+K + D + A + + +F ++ +G+P + + AR+
Sbjct: 159 IKISADFNAKAKSLGLESKFSNATKTALGDPDTEIR-ISARI 199
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 609 (219.4 bits), Expect = 8.8e-86, Sum P(3) = 8.8e-86
Identities = 134/348 (38%), Positives = 208/348 (59%)
Query: 426 TVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
T Q L G LKEYQ+KGL+W+V+ Y LNGILADEMGLGKTIQ+++ + +L E+K+
Sbjct: 490 TEQPTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLIEKKHE 549
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
FL++ P S + NW E ++ P +K + Y G Q+R L+ +I R F +
Sbjct: 550 -NKFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQPDI-------RYGNFQV 601
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF-NCRNRLLLTGTPIQ 604
L+T+Y+ ++ + + + +M++DE +K++ S +TL ++ +NRL+LTGTP+Q
Sbjct: 602 LLTTYEYVIRERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGTPLQ 661
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGI-ESHAEHGGTLNEHQ----LNRLHAILK 659
NN+ ELWALL+F++P +F+S + F++WF+ + A+ L E + + RLH +L+
Sbjct: 662 NNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLR 721
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQA-IKNKISLAGLFDNSRGHLNEKK 718
PF+LRR+KKDV +L K E ++ C LS Q YQ +K+ G + G + K
Sbjct: 722 PFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFVGA--DVGGAKSGIK 779
Query: 719 ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELE 766
LN N ++QLRK+CNHP +FE E S L + N L+ G+ E
Sbjct: 780 GLN--NKIMQLRKICNHPFVFEEVE--SVLNSSRLTNDLIWRVSGKFE 823
Score = 347 (127.2 bits), Expect = 8.8e-86, Sum P(3) = 8.8e-86
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L + + HRVL+F QMT++++I+ED++ ++ +YLRLDGS+ +R+DM
Sbjct: 819 SGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDM 878
Query: 1115 VRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F SD F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ +
Sbjct: 879 LKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 938
Query: 1174 V 1174
V
Sbjct: 939 V 939
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 46/215 (21%), Positives = 92/215 (42%)
Query: 376 SKQKMLTNTFDTECSKLREAADTEAAMLDVSVAG--SGNIDLHNPSTM--PVTSTVQTPE 431
+K+ L N + ++L +T A L + V S + + T+ P+ T+ +
Sbjct: 165 TKKDDLVNEILEKLTELETDFETRAQNLGIKVPSPSSSSSSKTDKDTLHSPL-GTIHAEK 223
Query: 432 LFKGSLKEYQLKGLQWL-VNCYEQGLNGILADEMGLGK-TIQAMAFLAHLAEEKNIWGPF 489
+ + + +LK L+ L N G D G+ K IQA+ L L + G
Sbjct: 224 IISNKISQ-RLKELENLPANI------GTFGDTDGIDKFKIQALIELKAL----RLLGKQ 272
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
++ ++L + A ++ P+LK+LP L E+ N+ PK R + +
Sbjct: 273 KLLRH-NILVHEAQQVKYADPNLKSLPL--ALSEKRSF--NVRPKIEQRNPQLLAVQLEE 327
Query: 550 YQLLVADE-KYFRRVKWQYMVLDEAQAIKSSNSIR 583
+ L A E K + ++ +V++++ + + +R
Sbjct: 328 LKKLEAREAKRKQHIEKVDLVVEKSTSRSEAKYVR 362
Score = 44 (20.5 bits), Expect = 4.9e-54, Sum P(3) = 4.9e-54
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 977 FTYRMTEEQHDPWLKRLLIGFARTSEN 1003
F + T E+ + +LKRLL A ++N
Sbjct: 974 FDNKSTAEEQEAFLKRLLEADANGADN 1000
Score = 37 (18.1 bits), Expect = 8.8e-86, Sum P(3) = 8.8e-86
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 299 KRQQQRLNFLIQQTELYSHFMQNKSSSQPSE 329
K + R+ L++QT + + K +Q E
Sbjct: 414 KTKDHRITHLLKQTNQFLDSLTEKVRAQQEE 444
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 565 (203.9 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 117/299 (39%), Positives = 184/299 (61%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 186 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 245
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L NW +E R+ P L+ + + G R +R + P + +
Sbjct: 246 PHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 298
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 299 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 358
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 359 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 410
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGL-FDNSRGHLNEKKILNLM 723
+K DV L K E+ V+ LS Q+ ++ KI + + NS G +++ ++LN++
Sbjct: 411 IKTDVEKSLPPKKEIKVYLGLSKMQREWWYT---KILMKDIDVLNSAGKMDKMRLLNIL 466
Score = 388 (141.6 bits), Expect = 1.0e-65, Sum P(3) = 1.0e-65
Identities = 84/207 (40%), Positives = 130/207 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 297 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 356
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 357 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 408
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD--NSRGHLNEKKILN 721
RR+K DV L K E+ V+ LS Q+ ++ KI + + D NS G +++ +
Sbjct: 409 RRIKTDVEKSLPPKKEIKVYLGLSKMQREWWYT---KILMKDI-DVLNSAGKMDK---MR 461
Query: 722 LMNIVIQLRKVCNHPELFERNE-GSSY 747
L+NI++QLRK CNHP LF+ E G Y
Sbjct: 462 LLNILMQLRKCCNHPYLFDGAEPGPPY 488
Score = 351 (128.6 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 74/145 (51%), Positives = 101/145 (69%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 477 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 535
Query: 1093 NYRKYRYLRLDGSSTIMDR--RDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFY 1149
+R Y Y RLDG + +R ++ + F S F+F+LSTRAGGLGINL +AD VI Y
Sbjct: 536 MWRGYEYCRLDGQTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 595
Query: 1150 ESDWNPTLDLQAMDRAHRLGQTKDV 1174
+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 596 DSDWNPQVDLQAMDRAHRIGQKKPV 620
Score = 73 (30.8 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 102 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRP 137
Score = 38 (18.4 bits), Expect = 6.7e-53, Sum P(3) = 6.7e-53
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 796 PPRLFELLEKEILYYRKTIGYKVPR 820
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 575 (207.5 bits), Expect = 1.5e-85, Sum P(3) = 1.5e-85
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 395 (144.1 bits), Expect = 3.6e-65, Sum P(3) = 3.6e-65
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 336 (123.3 bits), Expect = 1.5e-85, Sum P(3) = 1.5e-85
Identities = 74/155 (47%), Positives = 102/155 (65%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSST------------IMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + ++ +R+ + F S F+F+LSTRAGGLGIN
Sbjct: 526 MWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGIN 585
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 586 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Score = 75 (31.5 bits), Expect = 1.5e-85, Sum P(3) = 1.5e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNIKLGRP 131
Score = 38 (18.4 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 796 PPRLFELLEKEILYYRKTIGYKVPR 820
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 574 (207.1 bits), Expect = 1.5e-85, Sum P(4) = 1.5e-85
Identities = 118/298 (39%), Positives = 184/298 (61%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S E F+ WF + L + +L RLH +LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSAEDFDSWF--------DTKNCLGDQKLVERLHTVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 394 (143.8 bits), Expect = 8.0e-65, Sum P(4) = 8.0e-65
Identities = 84/205 (40%), Positives = 128/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S E F+ WF + L + +L RLH +LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSAEDFDSWF--------DTKNCLGDQKLVERLHTVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 210 (79.0 bits), Expect = 1.5e-85, Sum P(4) = 1.5e-85
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 1122 SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
S F+F+LSTRAGGLGINL +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 573 SSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 625
Score = 172 (65.6 bits), Expect = 1.5e-85, Sum P(4) = 1.5e-85
Identities = 36/87 (41%), Positives = 59/87 (67%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQ 1119
+R Y Y RLDG + +R ++++DF+
Sbjct: 526 MWRGYEYCRLDGQTPHEEREEILKDFK 552
Score = 73 (30.8 bits), Expect = 1.5e-85, Sum P(4) = 1.5e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRP 131
Score = 38 (18.4 bits), Expect = 6.4e-54, Sum P(3) = 6.4e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 801 PPRLFELLEKEILYYRKTIGYKVPR 825
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 575 (207.5 bits), Expect = 1.7e-85, Sum P(3) = 1.7e-85
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 395 (144.1 bits), Expect = 3.9e-65, Sum P(3) = 3.9e-65
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 336 (123.3 bits), Expect = 1.7e-85, Sum P(3) = 1.7e-85
Identities = 74/155 (47%), Positives = 102/155 (65%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSST------------IMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + ++ +R+ + F S F+F+LSTRAGGLGIN
Sbjct: 526 MWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGIN 585
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 586 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Score = 75 (31.5 bits), Expect = 1.7e-85, Sum P(3) = 1.7e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNIKLGRP 131
Score = 38 (18.4 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 796 PPRLFELLEKEILYYRKTIGYKVPR 820
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 575 (207.5 bits), Expect = 2.1e-85, Sum P(3) = 2.1e-85
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 153 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 212
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 213 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 265
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 266 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 325
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 326 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 377
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 378 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDKMRLLNIL 432
Score = 395 (144.1 bits), Expect = 6.9e-65, Sum P(3) = 6.9e-65
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 264 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 323
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 324 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 375
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 376 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDK---MRLL 429
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 430 NILMQLRKCCNHPYLFDGAEPGPPY 454
Score = 334 (122.6 bits), Expect = 2.1e-85, Sum P(3) = 2.1e-85
Identities = 74/155 (47%), Positives = 100/155 (64%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 443 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 501
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-------------RSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + +R D + + S F+F+LSTRAGGLGIN
Sbjct: 502 MWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGIN 561
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 562 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 596
Score = 73 (30.8 bits), Expect = 2.1e-85, Sum P(3) = 2.1e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 72 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRP 107
Score = 38 (18.4 bits), Expect = 2.2e-54, Sum P(3) = 2.2e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 772 PPRLFELLEKEILYYRKTIGYKVPR 796
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 575 (207.5 bits), Expect = 2.8e-85, Sum P(3) = 2.8e-85
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 177 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 237 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 289
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 290 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 349
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDKMRLLNIL 456
Score = 395 (144.1 bits), Expect = 6.3e-65, Sum P(3) = 6.3e-65
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 347
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 348 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 399
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSAGKMDK---MRLL 453
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 454 NILMQLRKCCNHPYLFDGAEPGPPY 478
Score = 334 (122.6 bits), Expect = 2.8e-85, Sum P(3) = 2.8e-85
Identities = 75/155 (48%), Positives = 101/155 (65%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 467 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 525
Query: 1093 NYRKYRYLRLDGSSTIMDR------------RDMVRDFQ-HRSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + +R R+ + F S F+F+LSTRAGGLGIN
Sbjct: 526 MWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGIN 585
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 586 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Score = 75 (31.5 bits), Expect = 2.8e-85, Sum P(3) = 2.8e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 96 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNIKLGRP 131
Score = 38 (18.4 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 796 PPRLFELLEKEILYYRKTIGYKVPR 820
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 575 (207.5 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 118/298 (39%), Positives = 185/298 (62%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 174 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 233
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 234 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 286
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 287 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 346
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 347 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 398
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 399 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDKMRLLNIL 453
Score = 395 (144.1 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 84/205 (40%), Positives = 129/205 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 344
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 345 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 396
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 397 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDK---MRLL 450
Query: 724 NIVIQLRKVCNHPELFERNE-GSSY 747
NI++QLRK CNHP LF+ E G Y
Sbjct: 451 NILMQLRKCCNHPYLFDGAEPGPPY 475
Score = 334 (122.6 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 74/155 (47%), Positives = 100/155 (64%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 464 YLFDGAEPGPPYTTDE-HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYC 522
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-------------RSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + +R D + + S F+F+LSTRAGGLGIN
Sbjct: 523 MWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGIN 582
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 583 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 617
Score = 73 (30.8 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 93 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRP 128
Score = 38 (18.4 bits), Expect = 3.9e-54, Sum P(3) = 3.9e-54
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 793 PPRLFELLEKEILYYRKTIGYKVPR 817
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 605 (218.0 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 129/308 (41%), Positives = 192/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ K Y +++++T+Y ++
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSK--YEE---YNVIVTTYNCAIS 609
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 610 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 669
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS +S A+ + ++ I+KPF+LRRVK++V+
Sbjct: 670 LLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 728
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
+L K + + C +S +Q+ Y GLF+ + +N +K + N+++QLR
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLY---------LGLFNRLKKSINNIEKSTEMCNVMMQLR 779
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 780 KMANHPLL 787
Score = 326 (119.8 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 909 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 968
Query: 1171 TKDV 1174
TK+V
Sbjct: 969 TKEV 972
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 605 (218.0 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 129/308 (41%), Positives = 192/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ K Y +++++T+Y ++
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSK--YEE---YNVIVTTYNCAIS 609
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 610 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 669
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS +S A+ + ++ I+KPF+LRRVK++V+
Sbjct: 670 LLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 728
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
+L K + + C +S +Q+ Y GLF+ + +N +K + N+++QLR
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLY---------LGLFNRLKKSINNIEKSTEMCNVMMQLR 779
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 780 KMANHPLL 787
Score = 326 (119.8 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 909 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 968
Query: 1171 TKDV 1174
TK+V
Sbjct: 969 TKEV 972
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 605 (218.0 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 129/308 (41%), Positives = 192/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ K Y +++++T+Y ++
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSK--YEE---YNVIVTTYNCAIS 609
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 610 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 669
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS +S A+ + ++ I+KPF+LRRVK++V+
Sbjct: 670 LLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 728
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
+L K + + C +S +Q+ Y GLF+ + +N +K + N+++QLR
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLY---------LGLFNRLKKSINNIEKSTEMCNVMMQLR 779
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 780 KMANHPLL 787
Score = 326 (119.8 bits), Expect = 5.9e-85, Sum P(2) = 5.9e-85
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 909 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 968
Query: 1171 TKDV 1174
TK+V
Sbjct: 969 TKEV 972
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 556 (200.8 bits), Expect = 6.4e-85, Sum P(3) = 6.4e-85
Identities = 113/290 (38%), Positives = 175/290 (60%)
Query: 428 QTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
++P K G+L++YQ++GL W+++ YE G+NGILADEMGLGKT+Q +A L +L +NI
Sbjct: 133 ESPSYIKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIP 192
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GP +V+ P S L+NW +E R+ P LK + G ER +++ + +
Sbjct: 193 GPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDV------MMPGEWDVC 246
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + F NRLLLTGTP+QNN
Sbjct: 247 VTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNN 306
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELW+LL+F++P +F+S F+ WF L + +L RLHA+L+PF+LRR
Sbjct: 307 LHELWSLLNFLLPDVFNSASDFDSWFDTNC---------LGDQKLVERLHAVLRPFLLRR 357
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK----ISLAGLFDNSR 711
+K +V L K EV ++ LS Q+ +Y I K ++ AG D R
Sbjct: 358 IKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMR 407
Score = 382 (139.5 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 82/206 (39%), Positives = 126/206 (61%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + F NRLLLTGTP+Q
Sbjct: 245 VCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQ 304
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S F+ WF L + +L RLHA+L+PF+L
Sbjct: 305 NNLHELWSLLNFLLPDVFNSASDFDSWFDTNC---------LGDQKLVERLHAVLRPFLL 355
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K +V L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 356 RRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 408
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 409 LNILMQLRKCCNHPYLFDGAEPGPPY 434
Score = 344 (126.2 bits), Expect = 6.4e-85, Sum P(3) = 6.4e-85
Identities = 73/143 (51%), Positives = 97/143 (67%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+ +SGK+ LD LL +++ + RVL+F+QMT++L+ILEDY
Sbjct: 423 YLFDGAEPGPPYTTD-THLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYC 481
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R + Y RLDG++ R + F S F+F+LSTRAGGLGINL AD VI Y+S
Sbjct: 482 MWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDS 541
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQ K V
Sbjct: 542 DWNPQVDLQAMDRAHRIGQRKPV 564
Score = 81 (33.6 bits), Expect = 6.4e-85, Sum P(3) = 6.4e-85
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 299 KRQQQRLN---FLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
KR+ R N FL++QTEL++HF+Q S P+ L V +P
Sbjct: 46 KRKTDRANRFEFLLKQTELFAHFIQPASQKSPTSPLKVKMGRP 88
Score = 42 (19.8 bits), Expect = 2.8e-53, Sum P(3) = 2.8e-53
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL ++ R I YK+P+
Sbjct: 763 PPRLFELLEMEILYYRKTIGYKVPR 787
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 604 (217.7 bits), Expect = 8.0e-85, Sum P(2) = 8.0e-85
Identities = 129/308 (41%), Positives = 192/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 499 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 557
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ K Y +++++T+Y ++
Sbjct: 558 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSK--YEE---YNVIVTTYNCAIS 612
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 613 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 672
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS +S A+ + ++ I+KPF+LRRVK++V+
Sbjct: 673 LLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 731
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
+L K + + C +S +Q+ Y GLF+ + +N +K + N+++QLR
Sbjct: 732 KQLPPKKDQIELCAMSEKQEQLY---------LGLFNRLKKSINNMEKNTEMCNVMMQLR 782
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 783 KMANHPLL 790
Score = 326 (119.8 bits), Expect = 8.0e-85, Sum P(2) = 8.0e-85
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 852 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 911
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 912 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 971
Query: 1171 TKDV 1174
TK+V
Sbjct: 972 TKEV 975
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 570 (205.7 bits), Expect = 2.4e-84, Sum P(3) = 2.4e-84
Identities = 117/298 (39%), Positives = 184/298 (61%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +N G
Sbjct: 154 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPG 213
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L+NW +E R+ P L+ + + G R +R + P + +
Sbjct: 214 PHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGE-------WDVC 266
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 267 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 326
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 327 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 378
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ ++LN++
Sbjct: 379 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDKMRLLNIL 433
Score = 399 (145.5 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 120/372 (32%), Positives = 190/372 (51%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 265 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 324
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 325 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 376
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ ++ LS Q+ +Y I K + L NS G +++ + L+
Sbjct: 377 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVL--NSSGKMDK---MRLL 430
Query: 724 NIVIQLRKVCNHPELFERNE-GSSYLYFGEI-PNSLLPPPFGEL-EDISFSGVRNPIEYK 780
NI++QLRK CNHP LF+ E G Y I NS +L I G R I +
Sbjct: 431 NILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQ 490
Query: 781 IPK---IVHQEILQSSEILCSAVG---HGISRELFQKRFNIFSAENVYQSIFSLASGSDA 834
+ + I+ + C G H LF + N+FS E + F+ + S
Sbjct: 491 MTRLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAI--EAFNAPNSSKF 548
Query: 835 SPVKSETFGFTHLMDLSPAEVAFLAKGSFMERL-LFAMLRWDRQFLDGILDVFMEAMDGE 893
+ S G + +L+ A+V L + ++ L AM R R + VF D
Sbjct: 549 IFMLSTRAGGLGI-NLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 607
Query: 894 LNENHPDRGKVR 905
+ E +R +++
Sbjct: 608 VEERIVERAEIK 619
Score = 332 (121.9 bits), Expect = 2.4e-84, Sum P(3) = 2.4e-84
Identities = 74/155 (47%), Positives = 101/155 (65%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D ++++SGK+ LD LL R++ + RVL+F+QMT++L+ILEDY
Sbjct: 444 YLFDGAEPGPPYTTDE-HIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYC 502
Query: 1093 NYRKYRYLRLDGSSTIMDRRDM------------VRDFQH-RSDIFVFLLSTRAGGLGIN 1139
+R Y Y RLDG + +R ++ + F S F+F+LSTRAGGLGIN
Sbjct: 503 MWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGIN 562
Query: 1140 LTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
L +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 563 LASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 597
Score = 72 (30.4 bits), Expect = 2.4e-84, Sum P(3) = 2.4e-84
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 73 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLARP 108
Score = 38 (18.4 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 773 PPRLFELLEKEILYYRKTIGYKVPR 797
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 595 (214.5 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 131/319 (41%), Positives = 196/319 (61%)
Query: 427 VQTPELFKGSL--KEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
++ P L SL K YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N
Sbjct: 483 IEQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN 542
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH 544
GP L+V PAS ++NW E++ +CP L L Y+G +ER +R NI+ K Y D ++
Sbjct: 543 K-GPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNK--YE-D--YN 596
Query: 545 ILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
+++T+Y ++ D FRR+K Y + DE +K+ SIR++ L++ N RNRLLLTGT
Sbjct: 597 VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGT 656
Query: 602 PIQNNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
P+QNN+ EL +LL+F+MP +F S + FS + A+ + ++ I+KP
Sbjct: 657 PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKP-ADEQSIYEKERIAHAKQIIKP 715
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKI 719
F+LRRVK++V+ L K + + C +S +Q+ Y +GLF+ + +N +K
Sbjct: 716 FILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLY---------SGLFNRLKKSINNLEKN 766
Query: 720 LNLMNIVIQLRKVCNHPEL 738
+ N+++QLRK+ NHP L
Sbjct: 767 TEMCNVMMQLRKMANHPLL 785
Score = 331 (121.6 bits), Expect = 2.4e-84, Sum P(2) = 2.4e-84
Identities = 66/124 (53%), Positives = 90/124 (72%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK +TL +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 847 LILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 906
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 907 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 966
Query: 1171 TKDV 1174
TK+V
Sbjct: 967 TKEV 970
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 598 (215.6 bits), Expect = 3.8e-84, Sum P(2) = 3.8e-84
Identities = 129/308 (41%), Positives = 193/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNN-GPHLIVVPA 554
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ + Y D +++++T+Y ++
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSR--YE-D--YNVIVTTYNCAIS 609
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 610 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 669
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS +S A+ + ++ I+KPF+LRRVK++V+
Sbjct: 670 LLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 728
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
+L K + + C +S +Q+ Y GLF+ + +N +K + N+++QLR
Sbjct: 729 KQLPPKKDRIELCAMSEKQEQLY---------LGLFNRLKKSINNLEKNTEMCNVMMQLR 779
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 780 KMANHPLL 787
Score = 326 (119.8 bits), Expect = 3.8e-84, Sum P(2) = 3.8e-84
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 909 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 968
Query: 1171 TKDV 1174
TK+V
Sbjct: 969 TKEV 972
Score = 37 (18.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 794 EILCSAVGHGISRELFQKRFNIFSAENVYQSI 825
++LC +G E Q RFNI S Y I
Sbjct: 572 KVLCY---YGSQEERKQIRFNIHSRYEDYNVI 600
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 593 (213.8 bits), Expect = 1.4e-83, Sum P(2) = 1.4e-83
Identities = 129/308 (41%), Positives = 192/308 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 491 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK-GPHLIVVPA 549
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP L L Y+G +ER +R NI+ K Y D +++++T+Y ++
Sbjct: 550 STIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNK--YE-D--YNVIVTTYNCAIS 604
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N RNRLLLTGTP+QNN+ EL +
Sbjct: 605 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMS 664
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS + A+ + ++ I+KPF+LRRVK++V+
Sbjct: 665 LLNFVMPHMFSSSTSEIRRMFSSKTKP-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 723
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE-KKILNLMNIVIQLR 730
L K + + C +S +Q+ Y +GLF+ + +N +K + N+++QLR
Sbjct: 724 KLLPPKKDRIELCAMSEKQEQLY---------SGLFNRLKKSINNLEKNTEMCNVMMQLR 774
Query: 731 KVCNHPEL 738
K+ NHP L
Sbjct: 775 KMANHPLL 782
Score = 326 (119.8 bits), Expect = 1.4e-83, Sum P(2) = 1.4e-83
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 844 LILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 903
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 904 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 963
Query: 1171 TKDV 1174
TK+V
Sbjct: 964 TKEV 967
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 591 (213.1 bits), Expect = 1.8e-83, Sum P(2) = 1.8e-83
Identities = 131/315 (41%), Positives = 195/315 (61%)
Query: 430 PELFKGS--LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
PE+ + LK YQL GL WLV ++ L+GILADEMGLGKTIQA++FLAHL +E N G
Sbjct: 420 PEILSSTFQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN-HG 478
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P L+ PAS L+NW E++ +CP K L Y+G +R +R I + ++I++
Sbjct: 479 PHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEI-----LNQIVEYNIIV 533
Query: 548 TSYQLLV---ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
++Y L + +D F ++K +Y V DE +K+ NS+R++ L++ N + RLLLTGTP+Q
Sbjct: 534 STYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQ 593
Query: 605 NNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFML 663
NN+ EL +LL+FIMP +F S Q + FS ++S +E + ++ I+KPF+L
Sbjct: 594 NNLLELMSLLNFIMPNMFSSSTSQIAKMFS--MKS-SEEQSSFERDRITHAKLIMKPFIL 650
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RRVK +V+ +L K E + C +S RQQ Y A+ +K+ +S G EK+ L
Sbjct: 651 RRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLK-----HSSNG---EKR--ELT 700
Query: 724 NIVIQLRKVCNHPEL 738
N+++QLRK+ NHP L
Sbjct: 701 NVMMQLRKMSNHPLL 715
Score = 324 (119.1 bits), Expect = 1.8e-83, Sum P(2) = 1.8e-83
Identities = 68/124 (54%), Positives = 87/124 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
+L DSGKL L LL L+ + RV+LF+Q T ML+ILE ++ + K+RY RLDGS+ + D
Sbjct: 777 VLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSD 836
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ F DIFVFLLSTRAGGLGINLT+A+ VI ++ D NP D QA R HR+GQ
Sbjct: 837 RIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQ 896
Query: 1171 TKDV 1174
TK V
Sbjct: 897 TKTV 900
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 592 (213.5 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 125/307 (40%), Positives = 190/307 (61%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SLK YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLA+L +E N GP L+V PA
Sbjct: 498 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 556
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
S ++NW E++ +CP LK L Y+G +ER +R NI+ + Y +++++T+Y ++
Sbjct: 557 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSR--YEE---YNVIVTTYNCAIS 611
Query: 556 ---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
D FRR+K Y + DE +K+ SIR++ L++ N NRLLLTGTP+QNN+ EL +
Sbjct: 612 SSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMS 671
Query: 613 LLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
LL+F+MP +F S + FS + A+ + ++ I+KPF+LRRVK++V+
Sbjct: 672 LLNFVMPHMFSSSTSEIRRMFSSKTKP-ADEQSIYEKERIAHAKQIIKPFILRRVKEEVL 730
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRK 731
+L K + + C +S +Q+ Y + N++ + N +K + N+++QLRK
Sbjct: 731 KQLPPKKDRIELCAMSEKQEQLYMNLFNRLK--------KSINNMEKNTEMCNVMMQLRK 782
Query: 732 VCNHPEL 738
+ NHP L
Sbjct: 783 MANHPLL 789
Score = 326 (119.8 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK + L +L L+ + RV+LF+Q T ML+ILE + + ++RYLRLDG + I +
Sbjct: 851 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 910
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQ
Sbjct: 911 RIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 970
Query: 1171 TKDV 1174
TK+V
Sbjct: 971 TKEV 974
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 555 (200.4 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 120/305 (39%), Positives = 188/305 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL+G+ WL C+ IL DEMGLGKT Q +A +LA N GPFL++ P S
Sbjct: 48 LRPYQLEGVNWLAQCFHYQNGCILGDEMGLGKTCQTIAVFIYLAGRLNDEGPFLILCPLS 107
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ R P L + Y G +ER L++++ ++++GFH+L+T+Y++ + D
Sbjct: 108 VLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDL------KQESGFHVLLTTYEICLKD 161
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ NS+ K+L F+ RLLLTGTPIQN++ EL++LL F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLSF 221
Query: 617 IMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTT 676
+ P LF E E F + E + + +E L+ +L+PF+LRRVK +V +EL
Sbjct: 222 VEPDLFSKEEV--EDFVQRYEDIEKESESASE-----LYKLLQPFLLRRVKAEVAAELPK 274
Query: 677 KTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNH 735
KTEV+++ +S+ Q+ +Y+AI K + ++ F+N KK+ L N++ QLRK +H
Sbjct: 275 KTEVVIYHGMSALQKKYYKAILMKDLEISDAFENEMA----KKV-KLQNVLSQLRKCVDH 329
Query: 736 PELFE 740
P LF+
Sbjct: 330 PYLFD 334
Score = 353 (129.3 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 74/124 (59%), Positives = 94/124 (75%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL L ++ HRVLLF+QMT+ML+IL+DYM+YR Y Y R+DGS +
Sbjct: 347 LIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEE 406
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R +++F + IF+FLLSTRAGG+G+NLTAADTVIF +SD+NP DLQA RAHR+GQ
Sbjct: 407 RHLAIKNFGQQP-IFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQ 465
Query: 1171 TKDV 1174
K V
Sbjct: 466 NKSV 469
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 581 (209.6 bits), Expect = 2.3e-82, Sum P(3) = 2.3e-82
Identities = 117/283 (41%), Positives = 180/283 (63%)
Query: 423 VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
+ +T Q + G +++YQL+GL+WL + + GL GILADEMGLGKT+QA++ +A +E
Sbjct: 188 LVATQQPAPVTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFF-KE 246
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
N+ GPFL+ AP S ++NW DE +R+ P +KT+ Y G ER LRK R ++
Sbjct: 247 HNVSGPFLISAPLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLR-DQKSPD 305
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F ++ TSY++ + D K+ + +W+Y+++DE +K+ N K LLS+N NRLL+TGTP
Sbjct: 306 FPVVCTSYEICMNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTP 365
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLN--EHQ----LNRLHA 656
+QNN+ ELW+LLHF++P +F+ F WF S ++ G + E + ++ +H+
Sbjct: 366 LQNNITELWSLLHFLLPEIFNDLNSFQNWFD--FSSVLDNNGQTDMIERRKRTLVSTMHS 423
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKN 699
ILKPF+LRRVK DV S L K E +++ L+ Q+ Y+ I N
Sbjct: 424 ILKPFLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREILN 466
Score = 313 (115.2 bits), Expect = 2.3e-82, Sum P(3) = 2.3e-82
Identities = 63/125 (50%), Positives = 86/125 (68%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY-RKYRYLRLDGSSTIM 1109
L+T SGK+ LD L+ L + H++L+F+Q L+IL+D+ + R + R+DG+ +
Sbjct: 621 LVTASGKMLLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQA 680
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
DR+ ++ F D +FLLSTRAGG GINL AADTVI ++SDWNP DLQA DRAHR+G
Sbjct: 681 DRQAQIKAFNTDKDYKIFLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIG 740
Query: 1170 QTKDV 1174
QTK V
Sbjct: 741 QTKPV 745
Score = 46 (21.3 bits), Expect = 2.3e-82, Sum P(3) = 2.3e-82
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 690 QQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+++ ++ + +I A ++ + +KK + N V+Q R CN P F
Sbjct: 560 EESIDESEQEEIERANTIKLAKREIAQKK---MQNPVMQARLACNSPHNF 606
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 584 (210.6 bits), Expect = 4.4e-82, Sum P(2) = 4.4e-82
Identities = 130/319 (40%), Positives = 196/319 (61%)
Query: 427 VQTPELFKGSL--KEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
++ P + SL K YQ GL WL ++ GLNGILADEMGLGKTIQA+AFLAH+ +E +
Sbjct: 421 IEQPSVLNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGD 480
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQE-RMVLRKNINPKRLYRRDAGF 543
GP L+V PAS L+NW E++ +CP+L L Y+ G QE R LR +I+ R F
Sbjct: 481 R-GPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADIS-----NRVVDF 534
Query: 544 HILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
++++T+Y ++ D FR+VK Y + DE +K+ +S+R++ L+ N ++RLLLTG
Sbjct: 535 NVIVTTYNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLTG 594
Query: 601 TPIQNNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
TP+QNN+ EL +LL+F+MP +F S + FS ++ AE T + ++ I+K
Sbjct: 595 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKAKT-AEEQSTYEKERIAHAKQIIK 653
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
PF+LRRVK +V+ +L K + + C +S +Q+ Y + NK+ +G NEK
Sbjct: 654 PFILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLK-----KTMKG--NEKNS 706
Query: 720 LNLMNIVIQLRKVCNHPEL 738
++ N ++QLRK+ NHP L
Sbjct: 707 -DMGNAMMQLRKMANHPLL 724
Score = 319 (117.4 bits), Expect = 4.4e-82, Sum P(2) = 4.4e-82
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 1052 LTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDR 1111
+ DSGK + L+ LL L+ + RV+LF+Q T +L+ILE ++ + ++RY+RLDG + I DR
Sbjct: 787 ILDSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDR 846
Query: 1112 RDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQT 1171
++ +F DIFVFLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+GQT
Sbjct: 847 IHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQT 906
Query: 1172 KDV 1174
++V
Sbjct: 907 REV 909
Score = 40 (19.1 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 23/95 (24%), Positives = 35/95 (36%)
Query: 389 CSKLR-EAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQW 447
C K EA + L+ S D H T + PE GS E Q + +
Sbjct: 131 CLKFNDEATASRKRRLNDSHINGKESDKH--MTKKPKADYHGPEALDGSKSEIQWERQEM 188
Query: 448 LVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
LV + G+ D+ L ++ ++ H A E
Sbjct: 189 LVEKLQNTFPGM--DKEELRDVLREHNWVFHEARE 221
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 597 (215.2 bits), Expect = 5.1e-82, Sum P(3) = 5.1e-82
Identities = 121/313 (38%), Positives = 190/313 (60%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
LK YQ+KGL+W+V+ + LNGILADEMGLGKTIQ +AF+ +L E K GPFLV+ P S
Sbjct: 366 LKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLS 425
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
+ NW +E ++ ++ + Y G + R V I + F++L+T+++ ++ +
Sbjct: 426 TVPNWQNEFDKWAANVHLIAYKGPKETRKVFEPII-------KSGKFNVLLTTFEYVIRE 478
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNNMAELWALLH 615
+ +++W+YM++DE +K+ + + L + F C+ RLL+TGTP+QN + ELWALL+
Sbjct: 479 KALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLN 538
Query: 616 FIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL---NRLHAILKPFMLRRVKKDVIS 672
F++P++F S F +WF+ + E E + RLH +L+PF+LRR+KK+V S
Sbjct: 539 FLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVES 598
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKV 732
EL K E +V C +S+ Q+ Y+ ++ GL + + + K + N M I LRK+
Sbjct: 599 ELPDKMEFVVRCDMSALQKVLYKHMQK-----GLLLDGKTNTGSKSLRNTM---IHLRKL 650
Query: 733 CNHPELFERNEGS 745
CNHP LFE E S
Sbjct: 651 CNHPFLFENVEES 663
Score = 321 (118.1 bits), Expect = 5.1e-82, Sum P(3) = 5.1e-82
Identities = 64/121 (52%), Positives = 87/121 (71%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGKL+ L +L +L+A HRVL+F QMT M+ I+ED++ +YLRLDGS+ +R +
Sbjct: 682 SGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGAL 741
Query: 1115 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
+ F S+ F+F+LSTRAGGLG+NL ADTVI ++SDWNP D+QA DRAHR+GQ +
Sbjct: 742 LDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAE 801
Query: 1174 V 1174
V
Sbjct: 802 V 802
Score = 42 (19.8 bits), Expect = 8.6e-53, Sum P(3) = 8.6e-53
Identities = 21/88 (23%), Positives = 35/88 (39%)
Query: 960 IPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLL----IGFARTSENIGPRKPGGPHQL 1015
+P + P + + R Y D +L++L ART E P +PG P +
Sbjct: 935 VPYLEVMP-GSRRTRREVDYSADTMSDDKFLEKLFDEDDTTSARTEEEPNPAQPG-PSSV 992
Query: 1016 IQEIDSELPVAK-------PALQLTYQI 1036
++S K PA LT+++
Sbjct: 993 SISLESSCDTQKDIKVDDVPAPPLTFKV 1020
Score = 41 (19.5 bits), Expect = 5.1e-82, Sum P(3) = 5.1e-82
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 299 KRQQQRLNFLIQQTELY 315
+++ QRL +L++QT+ Y
Sbjct: 260 EKKDQRLVYLLEQTDDY 276
Score = 38 (18.4 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 657 ILKPFMLRRVKKDVISEL 674
++ P+ +RR K + + EL
Sbjct: 154 LINPWSIRRTKYEYLQEL 171
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 550 (198.7 bits), Expect = 7.0e-82, Sum P(2) = 7.0e-82
Identities = 126/314 (40%), Positives = 187/314 (59%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILA-DEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
+LK +Q++G+ WL+ Y G+N +L D+MGLGKT+QA++FL++L + + GPFLV+ P
Sbjct: 50 TLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCP 109
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG----FHILITSY 550
SV + W EI+RF P+L+ L Y G R+ +RK++ + + G F +L+T+Y
Sbjct: 110 LSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYD-HVKKSSKGHFLPFDVLLTTY 168
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQNNMAE 609
+ + D+ + ++ WQY ++DEAQ +K+ NS+ + LL F RLL+TGTPIQNN+ E
Sbjct: 169 DIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTE 228
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKD 669
LWAL+HF MP +F + +QF F + + + + ++ L IL FMLRR K
Sbjct: 229 LWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSL 288
Query: 670 VISE----LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNI 725
+I L TE+ V L S Q+ Y +I K L GL + S G N +L NI
Sbjct: 289 LIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRK-ELPGLLELSSGGSNHT---SLQNI 344
Query: 726 VIQLRKVCNHPELF 739
VIQLRK C+HP LF
Sbjct: 345 VIQLRKACSHPYLF 358
Score = 350 (128.3 bits), Expect = 7.0e-82, Sum P(2) = 7.0e-82
Identities = 83/179 (46%), Positives = 109/179 (60%)
Query: 1010 GGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAK-LLTDSGKLQTLDILLKRL 1068
G H +Q I +L + A Y +F P + F+ + L+ SGKL LD LLKRL
Sbjct: 335 GSNHTSLQNIVIQL---RKACSHPY-LFPGIEP-EPFEEGEHLVQASGKLLVLDQLLKRL 389
Query: 1069 RAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHR------- 1121
HRVLLF+QMT L+IL+D+M R+Y Y RLDGS +R +++F +
Sbjct: 390 HDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDS 449
Query: 1122 ----SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVSS 1176
S+ FVF++STRAGG+G+NL AADTVIFYE DWNP +D QA+ RAHR+GQ V S
Sbjct: 450 EVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLS 508
Score = 37 (18.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 5/12 (41%), Positives = 11/12 (91%)
Query: 199 KVWVNIVRKDIP 210
K++ +I+RK++P
Sbjct: 315 KIYTSILRKELP 326
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 571 (206.1 bits), Expect = 7.1e-82, Sum P(3) = 7.1e-82
Identities = 121/311 (38%), Positives = 185/311 (59%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G +++YQ++GL WL + +NGILADEMGLGKT+Q ++ + ++ KN P LV+ P
Sbjct: 130 GEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVP 189
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQER-MVLRKNINPKRLYRRDAGFHILITSYQLL 553
S L NWA+E ++CP + + G R VLR I P++ F + T+Y+++
Sbjct: 190 KSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQK-------FDVCCTTYEMM 242
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
+ + +++ W+Y+++DEA IK+ S +T+ N NRLL+TGTP+QNN+ ELWAL
Sbjct: 243 LKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWAL 302
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
L+F++P +F S + F+ WFS + A G T + RLH +L+PF+LRR+K DV
Sbjct: 303 LNFLLPDIFTSSDDFDSWFS----NDAMSGNT---DLVQRLHKVLQPFLLRRIKSDVEKS 355
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNLMNIVIQLRKV 732
L K EV V+ LS Q+ +Y + K I + N G + + + LMNI++ LRK
Sbjct: 356 LLPKKEVKVYVGLSKMQREWYTKVLMKDIDII----NGAGKVEKAR---LMNILMHLRKC 408
Query: 733 CNHPELFERNE 743
NHP LF+ E
Sbjct: 409 VNHPYLFDGAE 419
Score = 340 (124.7 bits), Expect = 7.1e-82, Sum P(3) = 7.1e-82
Identities = 70/141 (49%), Positives = 93/141 (65%)
Query: 1036 IFGSCPPMQSFDPAKLLTD-SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P F + L D SGK+ LD LL + + + RVL+F+Q ++ML++LED+ +
Sbjct: 414 LFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWW 473
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDW 1153
R Y Y RLDGS+ DR + + + S F+F+L+TRAGGLGINL AD VI Y+SDW
Sbjct: 474 RHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDW 533
Query: 1154 NPTLDLQAMDRAHRLGQTKDV 1174
NP DLQAMDRAHR+GQ K V
Sbjct: 534 NPQSDLQAMDRAHRIGQKKQV 554
Score = 38 (18.4 bits), Expect = 7.1e-82, Sum P(3) = 7.1e-82
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 303 QRLNFLIQQTELYSHFMQN 321
+R L+Q+TE +SH + +
Sbjct: 47 KRFERLLQKTENFSHCLSS 65
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 533 (192.7 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 122/322 (37%), Positives = 185/322 (57%)
Query: 427 VQTPELFKGSLK--EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
V+ P+L L+ +YQ+ GL WL ++Q +NGILADEMGLGKTIQ +AFLA+L E
Sbjct: 277 VEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGL 336
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA--G 542
L+V P+S L+NW EISR+CP+L Y G ER +R + +D G
Sbjct: 337 SQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGR------FAKDGFTG 390
Query: 543 FHILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
F +L+T+Y ++ + + K FR K Y++ DEA +K+ + R+ L++ N R R+LLT
Sbjct: 391 FDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLT 450
Query: 600 GTPIQNNMAELWALLHFIMPTLF-DSHEQFNEWFSKGIESHAEHG--GTLNEHQLNRLHA 656
GTP+QNN+ EL +LL F+MP F S E F+K +S + E Q+ R
Sbjct: 451 GTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKR 510
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE 716
I+KPF+LRR+KKDV+ L K ++ +SS+Q+ +Y L + N++G +
Sbjct: 511 IMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYH------ELVDYYSNNKGEVCS 564
Query: 717 KKILNLMNIVIQLRKVCNHPEL 738
+ I++++R++ NHP L
Sbjct: 565 SSERAGIAIMMEMRRIANHPLL 586
Score = 364 (133.2 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 72/150 (48%), Positives = 103/150 (68%)
Query: 1029 ALQLTYQIFGSCPPMQSFD---PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKML 1085
A+ +Q++ + +D P L+ DSGK LD LL +L+AE HRVLLF+Q T ML
Sbjct: 622 AVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMML 681
Query: 1086 NILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADT 1145
+I+E+Y+ RK+ + RLDG++ + R+D++ DF IFVFLLST+AGG+GINLTAADT
Sbjct: 682 DIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADT 741
Query: 1146 VIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
+ ++ D+NP D QA DR HR+GQ + V+
Sbjct: 742 CVIHDIDFNPYNDKQAEDRCHRMGQQRPVT 771
Score = 37 (18.1 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 111 RLKALVASNSPQKFSL 126
RLK V N P+K SL
Sbjct: 519 RLKKDVLKNLPKKLSL 534
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 783 (280.7 bits), Expect = 2.6e-80, Sum P(2) = 2.6e-80
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 593 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 652
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 653 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 706
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 707 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 766
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 767 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 826
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 827 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 879
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 880 VINILMQLRKVCNHPNLFD 898
Score = 47 (21.6 bits), Expect = 2.6e-80, Sum P(2) = 2.6e-80
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 215 LDFIVGQTEKYSDLL-SQSLNQP 236
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 783 (280.7 bits), Expect = 2.6e-80, Sum P(2) = 2.6e-80
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 595 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 654
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 655 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 708
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 709 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 768
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 769 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 828
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 829 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 881
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 882 VINILMQLRKVCNHPNLFD 900
Score = 47 (21.6 bits), Expect = 2.6e-80, Sum P(2) = 2.6e-80
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 214 LDFIVGQTEKYSDLL-SQSLNQP 235
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 547 (197.6 bits), Expect = 5.5e-80, Sum P(2) = 5.5e-80
Identities = 118/319 (36%), Positives = 188/319 (58%)
Query: 422 PVTSTVQTPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
P + P KG ++++QL G+ W+ + + NGILADEMGLGKT+Q + FL++L
Sbjct: 374 PYRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLV 433
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
GPFL+V P S + W + ++ + PDL ++ Y G + R +R+ R
Sbjct: 434 HSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRK 493
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
F+IL+T+Y+ ++ D++ ++WQY+ +DEA +K+S S ++TL F NRLL+TG
Sbjct: 494 LKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITG 553
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
TP+QNN+ EL +L++F+MP F ++ N F + +AE E + L L+P
Sbjct: 554 TPLQNNLKELASLVNFLMPGKFYIRDELN--FD---QPNAEQ-----ERDIRDLQERLQP 603
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
F+LRR+KKDV L +K+E ++ +LS Q +Y+ I K + L GH + + L
Sbjct: 604 FILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTK-NYRAL----TGHTDGRGQL 658
Query: 721 NLMNIVIQLRKVCNHPELF 739
+L+NIV++L+KV NHP LF
Sbjct: 659 SLLNIVVELKKVSNHPYLF 677
Score = 348 (127.6 bits), Expect = 5.5e-80, Sum P(2) = 5.5e-80
Identities = 72/126 (57%), Positives = 90/126 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +SGK+ LD LL+RL+ + HRVL+F+QM +MLNIL +YM+ R Y Y RLDG+
Sbjct: 699 IIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASV 758
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + F S FVFLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+G
Sbjct: 759 RRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIG 818
Query: 1170 QTKDVS 1175
Q V+
Sbjct: 819 QKNHVN 824
Score = 39 (18.8 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 932 YDPCEDLVVSHQER 945
Y+P D V++H++R
Sbjct: 205 YEPIIDFVLNHRKR 218
Score = 37 (18.1 bits), Expect = 3.1e-47, Sum P(2) = 3.1e-47
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1053 TDS-GKLQTLDILLKRLRAENHRVL 1076
TD G+L L+I+++ + NH L
Sbjct: 652 TDGRGQLSLLNIVVELKKVSNHPYL 676
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 588 (212.0 bits), Expect = 1.9e-79, Sum P(2) = 1.9e-79
Identities = 129/319 (40%), Positives = 198/319 (62%)
Query: 426 TVQTPELFKGSLK--EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 483
+++ P++ +LK YQL GL+WL+ ++ L+GILADEMGLGKTIQA+AFLAHL E K
Sbjct: 435 SIKQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYE-K 493
Query: 484 NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGF 543
I GP L+ P+S L+NW E+ +CP LK L Y+G +++R LR++I + D F
Sbjct: 494 GIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLI---D--F 548
Query: 544 HILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
+I++++Y L + D FR++K +Y V DE +K+ NS+R++ L++ N +RLLLTG
Sbjct: 549 NIIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTG 608
Query: 601 TPIQNNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
TP+QNN+ EL +LL+FIMP++F S Q ++ FS +E + ++ ++ + I+K
Sbjct: 609 TPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFST---RSSEEESSFHKDRIAQARLIMK 665
Query: 660 PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
PF+LRRVK +V+ EL K E + C +S Q Y + ++ G E
Sbjct: 666 PFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKRLK-----KTPNGDKRE--- 717
Query: 720 LNLMNIVIQLRKVCNHPEL 738
L N+++QLRK+ NHP L
Sbjct: 718 --LCNVMMQLRKMANHPLL 734
Score = 290 (107.1 bits), Expect = 1.9e-79, Sum P(2) = 1.9e-79
Identities = 59/124 (47%), Positives = 85/124 (68%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ DSGK L L +L+ + RV+LF+Q T ML+I+E + + ++Y+RLDGS+ + +
Sbjct: 796 LILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAE 855
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R ++ + +IFVFLLSTRAGG GINL +A+TVI ++ D NP D QA DR HR+GQ
Sbjct: 856 RIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQ 915
Query: 1171 TKDV 1174
T+ V
Sbjct: 916 TRTV 919
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 586 (211.3 bits), Expect = 4.3e-79, Sum P(3) = 4.3e-79
Identities = 124/326 (38%), Positives = 201/326 (61%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L++YQ++GL WLV+ + N ILADEMGLGKTIQ ++FL++L E++I GPFLVV P
Sbjct: 753 GTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKGPFLVVVP 812
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLR--KNINPKRLYRRDAGFHILITSYQL 552
S + NW E +++ P + + Y G Q R ++R + RL ++ F++L+T+Y
Sbjct: 813 LSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTYDF 872
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
++ D+ +KW+++ +DEA +K+S S+ + L +N NRLL+TGTP+QN++ ELW
Sbjct: 873 ILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLYNTTNRLLVTGTPLQNSLKELWN 932
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LL+F+MP F S + F + +S E N+ Q+ +LH++LKP +LRR+KKDV
Sbjct: 933 LLNFLMPNKFTSLKDFQDQYSDLKE---------ND-QIAQLHSVLKPHLLRRIKKDVEK 982
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKV 732
L KTE ++ LS+ Q+ +Y+ I K + ++G EK L+NI+ +L+K
Sbjct: 983 SLPPKTERILRVDLSNVQKKYYKWILTK----NFQELNKGK-GEKT--TLLNIMTELKKT 1035
Query: 733 CNHPELFERNEGSSYLYFGEIPNSLL 758
CNHP L++ L ++ +S++
Sbjct: 1036 CNHPYLYQNARDECELGAKDLLDSMI 1061
Score = 315 (115.9 bits), Expect = 4.3e-79, Sum P(3) = 4.3e-79
Identities = 67/127 (52%), Positives = 88/127 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ SGKL LD LL RL+ HRVL+F+QM +ML+IL DY+ R +++ RLDGS + +
Sbjct: 1060 MIRASGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMS-RE 1118
Query: 1111 RRDMVRDFQHRSDI--FVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1168
+R D + D F FLLST+AGGLGINL+ ADTVI ++SDWNP DLQA RAHR+
Sbjct: 1119 KRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRI 1178
Query: 1169 GQTKDVS 1175
GQ V+
Sbjct: 1179 GQKNHVN 1185
Score = 40 (19.1 bits), Expect = 4.3e-79, Sum P(3) = 4.3e-79
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 391 KLREAADTEAAM--LDVSVAGSGNID 414
K + +D E+ + L++ GSGNID
Sbjct: 455 KNKTESDEESTITHLNLRTRGSGNID 480
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 616 (221.9 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 139/325 (42%), Positives = 196/325 (60%)
Query: 423 VTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
V V+ P L G L +YQL+GL+WLV+ Y L+GILADEMGLGKTIQ ++ A+L E
Sbjct: 869 VKEKVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKE 928
Query: 482 EKN-IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
KN I L++ P S L NW E +R+CP L + Y G ER K+I K L +
Sbjct: 929 FKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLER----KHIAKKLL---E 981
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F I IT++ L++ ++ + ++ W Y+V+DE +K++ S R+ LS F + R+LLT
Sbjct: 982 QTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKS-RFHVFLSEFKSKYRILLT 1040
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE-HGGTLNEHQL---NRLH 655
GTP+QNN++ELW+LL+F++P +F S F +WF K + + + + E QL NRLH
Sbjct: 1041 GTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLH 1100
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD-NSRGHL 714
++L PFMLRRVKKDV+ L K E +H +LS Q+ Y+ I+ K G N G +
Sbjct: 1101 SVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTK----GFKQVNHNGSI 1156
Query: 715 NEKKILNLMNIVIQLRKVCNHPELF 739
K NIV+QLRK+ NHP LF
Sbjct: 1157 TTKIF---QNIVMQLRKIVNHPYLF 1178
Score = 161 (61.7 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 1123 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
D +F+LSTR+G LG+NL ADTVI ++SD+NP D+QAM R HR+GQ K+V
Sbjct: 1402 DAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQ-KNV 1452
Score = 161 (61.7 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +L H+VL+F+QMTK++NIL DY+ +R Y+Y RLDG+ + +R+ +
Sbjct: 1192 SGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKI 1251
Query: 1115 VRDFQH 1120
+ F +
Sbjct: 1252 IDQFNN 1257
Score = 40 (19.1 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 528 RKNINPKRLYRRD 540
+K IN K+LY D
Sbjct: 556 KKKINTKKLYHHD 568
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 520 GLQERMVLRKNINPKRLYRRDAG 542
GLQER + N Y++D G
Sbjct: 1244 GLQERKKIIDQFNNNVEYKKDEG 1266
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 616 (221.9 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 139/325 (42%), Positives = 196/325 (60%)
Query: 423 VTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
V V+ P L G L +YQL+GL+WLV+ Y L+GILADEMGLGKTIQ ++ A+L E
Sbjct: 869 VKEKVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKE 928
Query: 482 EKN-IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
KN I L++ P S L NW E +R+CP L + Y G ER K+I K L +
Sbjct: 929 FKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLER----KHIAKKLL---E 981
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLT 599
F I IT++ L++ ++ + ++ W Y+V+DE +K++ S R+ LS F + R+LLT
Sbjct: 982 QTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKS-RFHVFLSEFKSKYRILLT 1040
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE-HGGTLNEHQL---NRLH 655
GTP+QNN++ELW+LL+F++P +F S F +WF K + + + + E QL NRLH
Sbjct: 1041 GTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLH 1100
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD-NSRGHL 714
++L PFMLRRVKKDV+ L K E +H +LS Q+ Y+ I+ K G N G +
Sbjct: 1101 SVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTK----GFKQVNHNGSI 1156
Query: 715 NEKKILNLMNIVIQLRKVCNHPELF 739
K NIV+QLRK+ NHP LF
Sbjct: 1157 TTKIF---QNIVMQLRKIVNHPYLF 1178
Score = 161 (61.7 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 1123 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
D +F+LSTR+G LG+NL ADTVI ++SD+NP D+QAM R HR+GQ K+V
Sbjct: 1402 DAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQ-KNV 1452
Score = 161 (61.7 bits), Expect = 6.6e-79, Sum P(3) = 6.6e-79
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
SGK + LD +L +L H+VL+F+QMTK++NIL DY+ +R Y+Y RLDG+ + +R+ +
Sbjct: 1192 SGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKI 1251
Query: 1115 VRDFQH 1120
+ F +
Sbjct: 1252 IDQFNN 1257
Score = 40 (19.1 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 528 RKNINPKRLYRRD 540
+K IN K+LY D
Sbjct: 556 KKKINTKKLYHHD 568
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 520 GLQERMVLRKNINPKRLYRRDAG 542
GLQER + N Y++D G
Sbjct: 1244 GLQERKKIIDQFNNNVEYKKDEG 1266
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 525 (189.9 bits), Expect = 7.3e-79, Sum P(2) = 7.3e-79
Identities = 106/289 (36%), Positives = 172/289 (59%)
Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
++ P G++K YQL+GL WL Y +NGILADEMGLGKT+Q ++ L +L KNI
Sbjct: 312 LKQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIK 371
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
+++ P S L+NW +EI ++C +K Y+G +R L +N+ L+ + F +L
Sbjct: 372 KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNL----LH---SDFDVL 424
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+T+Y++++ D+ + W ++V+DEA IK+ S+ ++ NRLL+TGTP+ NN
Sbjct: 425 LTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNN 484
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRV 666
+ ELW+LL+F+MP +FD+ E+F+ F+ I + + +E + +LH ILKPFMLRR+
Sbjct: 485 LKELWSLLNFLMPKIFDNSEEFDNLFN--ISKISTNDNKQSEI-ITQLHTILKPFMLRRL 541
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHL 714
K +V L K E+ + +S Q+ Y I +K I + S+ +
Sbjct: 542 KVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQM 590
Score = 366 (133.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 81/222 (36%), Positives = 131/222 (59%)
Query: 528 RKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTL 587
RK +N + L D F +L+T+Y++++ D+ + W ++V+DEA IK+ S+ ++
Sbjct: 409 RKELN-RNLLHSD--FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSV 465
Query: 588 LSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLN 647
NRLL+TGTP+ NN+ ELW+LL+F+MP +FD+ E+F+ F+ I + + +
Sbjct: 466 RFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFN--ISKISTNDNKQS 523
Query: 648 EHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGL 706
E + +LH ILKPFMLRR+K +V L K E+ + +S Q+ Y I +K I +
Sbjct: 524 EI-ITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNA 582
Query: 707 FDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYL 748
S+ N+ ++NI++QLRK CNHP LF+ E Y+
Sbjct: 583 MTGSK---NQ-----MLNILMQLRKCCNHPYLFDGIEEPPYI 616
Score = 361 (132.1 bits), Expect = 7.3e-79, Sum P(2) = 7.3e-79
Identities = 70/125 (56%), Positives = 94/125 (75%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGK+ LD LL RL+ EN RVLLF+QMT++L+I++DY ++ Y YLR+DGS+ +
Sbjct: 621 LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 1111 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S F+FLLSTRAGG+GINLT AD VI ++SD+NP +D+QAMDRAHR+G
Sbjct: 681 RQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIG 740
Query: 1170 QTKDV 1174
Q K V
Sbjct: 741 QKKRV 745
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 525 (189.9 bits), Expect = 7.3e-79, Sum P(2) = 7.3e-79
Identities = 106/289 (36%), Positives = 172/289 (59%)
Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
++ P G++K YQL+GL WL Y +NGILADEMGLGKT+Q ++ L +L KNI
Sbjct: 312 LKQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIK 371
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
+++ P S L+NW +EI ++C +K Y+G +R L +N+ L+ + F +L
Sbjct: 372 KKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNL----LH---SDFDVL 424
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+T+Y++++ D+ + W ++V+DEA IK+ S+ ++ NRLL+TGTP+ NN
Sbjct: 425 LTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNN 484
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRV 666
+ ELW+LL+F+MP +FD+ E+F+ F+ I + + +E + +LH ILKPFMLRR+
Sbjct: 485 LKELWSLLNFLMPKIFDNSEEFDNLFN--ISKISTNDNKQSEI-ITQLHTILKPFMLRRL 541
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHL 714
K +V L K E+ + +S Q+ Y I +K I + S+ +
Sbjct: 542 KVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQM 590
Score = 366 (133.9 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 81/222 (36%), Positives = 131/222 (59%)
Query: 528 RKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTL 587
RK +N + L D F +L+T+Y++++ D+ + W ++V+DEA IK+ S+ ++
Sbjct: 409 RKELN-RNLLHSD--FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSV 465
Query: 588 LSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLN 647
NRLL+TGTP+ NN+ ELW+LL+F+MP +FD+ E+F+ F+ I + + +
Sbjct: 466 RFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFN--ISKISTNDNKQS 523
Query: 648 EHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGL 706
E + +LH ILKPFMLRR+K +V L K E+ + +S Q+ Y I +K I +
Sbjct: 524 EI-ITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNA 582
Query: 707 FDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYL 748
S+ N+ ++NI++QLRK CNHP LF+ E Y+
Sbjct: 583 MTGSK---NQ-----MLNILMQLRKCCNHPYLFDGIEEPPYI 616
Score = 361 (132.1 bits), Expect = 7.3e-79, Sum P(2) = 7.3e-79
Identities = 70/125 (56%), Positives = 94/125 (75%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGK+ LD LL RL+ EN RVLLF+QMT++L+I++DY ++ Y YLR+DGS+ +
Sbjct: 621 LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDE 680
Query: 1111 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S F+FLLSTRAGG+GINLT AD VI ++SD+NP +D+QAMDRAHR+G
Sbjct: 681 RQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIG 740
Query: 1170 QTKDV 1174
Q K V
Sbjct: 741 QKKRV 745
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 521 (188.5 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 115/290 (39%), Positives = 174/290 (60%)
Query: 416 HNPSTMPVTSTVQTPEL----FKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTI 470
H P P+ + VQ P+L G L+ YQL+G+ WLV C+ IL DEMGLGKT
Sbjct: 16 HGPE--PLRTRVQEPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTC 73
Query: 471 QAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN 530
Q +A L +L N GPFLV+ P SVL+NW +E+ RF P L + Y G +ER L+++
Sbjct: 74 QTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQD 133
Query: 531 INPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF 590
+ R+++GFH+L+T+Y++ + D + + W + +DEA +K+ +S+ +TL F
Sbjct: 134 L------RQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEF 187
Query: 591 NCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ 650
+ RLLLTGTPIQN++ EL++LL + P LF EQ ++ + + E
Sbjct: 188 SAVFRLLLTGTPIQNSLRELYSLLCVVEPDLF-CREQVEDFVQRYQDIEKE------SKS 240
Query: 651 LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK 700
+ LH +L+PF+LRRVK V +EL KTEV+V+ +S+ Q+ +Y+AI K
Sbjct: 241 ASELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMK 290
Score = 352 (129.0 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 78/140 (55%), Positives = 100/140 (71%)
Query: 1036 IFGSCPPMQSFDPAK-LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P + F+ + L+ SGKL LD LL L + HRVLLF+QMT ML+IL+DYM+Y
Sbjct: 321 LFDGVEP-EPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDY 379
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
R Y Y R+DGS +R +++F ++ IFVFLLSTRAGG+G+NLTAADTVIF +SD+N
Sbjct: 380 RGYSYERVDGSVRGEERHLAIKNFGNQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFN 438
Query: 1155 PTLDLQAMDRAHRLGQTKDV 1174
P DLQA RAHR+GQ K V
Sbjct: 439 PQNDLQAAARAHRIGQNKSV 458
Score = 341 (125.1 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 78/203 (38%), Positives = 123/203 (60%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
R+++GFH+L+T+Y++ + D + + W + +DEA +K+ +S+ +TL F+ RLL
Sbjct: 135 RQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLL 194
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAI 657
LTGTPIQN++ EL++LL + P LF EQ ++ + + E + LH +
Sbjct: 195 LTGTPIQNSLRELYSLLCVVEPDLF-CREQVEDFVQRYQDIEKE------SKSASELHRL 247
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
L+PF+LRRVK V +EL KTEV+V+ +S+ Q+ +Y+AI K A F+N K
Sbjct: 248 LQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDA--FENETA----K 301
Query: 718 KILNLMNIVIQLRKVCNHPELFE 740
K+ L NI+ QLRK +HP LF+
Sbjct: 302 KV-KLQNILTQLRKCVDHPYLFD 323
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 530 (191.6 bits), Expect = 2.0e-78, Sum P(2) = 2.0e-78
Identities = 125/319 (39%), Positives = 192/319 (60%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK-NIWGPFLVVA 493
G+L YQL+GL WL + QG + ILADEMGLGKT+Q + FL L +E+ + GP+LV A
Sbjct: 629 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQGHSKGPYLVSA 688
Query: 494 PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI---------NPKRLYR--RDAG 542
P S + NW E + PD + Y G + R V+R+N + K+++R ++A
Sbjct: 689 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQ 748
Query: 543 --FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L S+ +LLLTG
Sbjct: 749 IKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 808
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
TP+QNN+ EL+ LL+F+ P F++ E F E F+ I E Q+ +LH +L P
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD-ISK---------EDQIKKLHDLLGP 858
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NS+G N+ +
Sbjct: 859 HMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR-NFEAL--NSKGGGNQ---V 912
Query: 721 NLMNIVIQLRKVCNHPELF 739
+L+NI++ L+K CNHP LF
Sbjct: 913 SLLNIMMDLKKCCNHPYLF 931
Score = 355 (130.0 bits), Expect = 2.0e-78, Sum P(2) = 2.0e-78
Identities = 73/134 (54%), Positives = 92/134 (68%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P S+D L+ SGKL L +LK+LR HRVL+F+QMTKML++LED++ Y Y+Y R
Sbjct: 942 PNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYER 1001
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1002 IDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1061
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1062 AFSRAHRIGQNKKV 1075
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 528 (190.9 bits), Expect = 9.8e-78, Sum P(2) = 9.8e-78
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 730 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 789
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 790 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 849
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 850 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 909
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 910 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 959
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 960 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1013
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1014 LLNIMMDLKKCCNHPYLF 1031
Score = 352 (129.0 bits), Expect = 9.8e-78, Sum P(2) = 9.8e-78
Identities = 68/134 (50%), Positives = 94/134 (70%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1042 PSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1101
Query: 1102 LDGSSTIMDRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F H + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1102 IDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1161
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1162 AFSRAHRIGQANKV 1175
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 513 (185.6 bits), Expect = 1.1e-77, Sum P(2) = 1.1e-77
Identities = 114/285 (40%), Positives = 175/285 (61%)
Query: 422 PVTSTVQTPEL----FKG-SLKEYQLKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAF 475
PV + VQ +L G L+ YQL+G+ WLV C+ G NG IL DEMGLGKT Q +A
Sbjct: 20 PVRTRVQEQDLQEWGLTGIRLRSYQLEGVNWLVQCFH-GQNGCILGDEMGLGKTCQTIAL 78
Query: 476 LAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKR 535
L +L N GPFL++ P SVL+NW +E+ RF P L + Y G +ER ++++
Sbjct: 79 LIYLVGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDL---- 134
Query: 536 LYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNR 595
R+++GFH+L+T+Y++ + D + + W + +DEA +K+ +S+ +TL F+ R
Sbjct: 135 --RQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFR 192
Query: 596 LLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLH 655
LLLTGTPIQN++ EL++LL + P LF EQ + F + + + + +E LH
Sbjct: 193 LLLTGTPIQNSLQELYSLLSVVEPDLF-CREQVED-FVQCYQDIEKESKSASE-----LH 245
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK 700
+L+PF+LRRVK V +EL KTEV+++ +S+ Q+ +Y+AI K
Sbjct: 246 RLLRPFLLRRVKAQVATELPKKTEVVIYHGMSALQKKYYKAILMK 290
Score = 352 (129.0 bits), Expect = 1.1e-77, Sum P(2) = 1.1e-77
Identities = 78/140 (55%), Positives = 99/140 (70%)
Query: 1036 IFGSCPPMQSFDPAK-LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P + F+ + L+ SGKL LD LL L + HRVLLF+QMT ML+IL+DYM+Y
Sbjct: 321 LFDGVEP-EPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDY 379
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
R Y Y R+DGS +R +++F + IFVFLLSTRAGG+G+NLTAADTVIF +SD+N
Sbjct: 380 RGYSYERVDGSVRGEERHLAIKNFG-KQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFN 438
Query: 1155 PTLDLQAMDRAHRLGQTKDV 1174
P DLQA RAHR+GQ K V
Sbjct: 439 PQNDLQAAARAHRIGQNKSV 458
Score = 339 (124.4 bits), Expect = 2.2e-58, Sum P(2) = 2.2e-58
Identities = 77/203 (37%), Positives = 125/203 (61%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
R+++GFH+L+T+Y++ + D + + W + +DEA +K+ +S+ +TL F+ RLL
Sbjct: 135 RQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLL 194
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAI 657
LTGTPIQN++ EL++LL + P LF EQ + F + + + + +E LH +
Sbjct: 195 LTGTPIQNSLQELYSLLSVVEPDLF-CREQVED-FVQCYQDIEKESKSASE-----LHRL 247
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
L+PF+LRRVK V +EL KTEV+++ +S+ Q+ +Y+AI K A F+N K
Sbjct: 248 LRPFLLRRVKAQVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDA--FENETA----K 301
Query: 718 KILNLMNIVIQLRKVCNHPELFE 740
K+ L N++ QLRK +HP LF+
Sbjct: 302 KV-KLQNVLTQLRKCVDHPYLFD 323
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 543 (196.2 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 119/331 (35%), Positives = 195/331 (58%)
Query: 426 TVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
+VQ P + G L+++QL G+ W+ + +G NGILADEMGLGKT+Q +AF++ L +
Sbjct: 365 SVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQ 424
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN---INPKRLYRRDAG 542
GP ++V P S + W D ++ PDL + Y G + R +R+ NP+ ++
Sbjct: 425 NGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMK 484
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F++L+T+Y+ ++ D +KWQ+M +DEA +K++ S +++L SF NR+L+TGTP
Sbjct: 485 FNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTP 544
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFM 662
+QNN+ EL AL++F+MP F ++ + E+ E E ++ LH ++PF+
Sbjct: 545 LQNNIKELAALVNFLMPGRFTIDQEID------FENQDEE----QEEYIHDLHRRIQPFI 594
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG-HLNEKKILN 721
LRR+KKDV L +KTE ++ +LS Q +Y+ I K + + L ++G H + +LN
Sbjct: 595 LRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTK-NYSALTAGAKGGHFS---LLN 650
Query: 722 LMNIVIQLRKVCNHPELFERNEGSSYLYFGE 752
+MN +L+K NHP LF+ E FG+
Sbjct: 651 IMN---ELKKASNHPYLFDNAEERVLQKFGD 678
Score = 331 (121.6 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 68/125 (54%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGK+ LD LL RL+ + HRVL+F+QM +ML+IL DY++ + + RLDG+
Sbjct: 690 LIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQ 749
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + F S+ FVFLLSTRAGGLGINL ADTV+ ++SDWNP DLQAM RAHR+G
Sbjct: 750 RRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIG 809
Query: 1170 QTKDV 1174
Q V
Sbjct: 810 QKNHV 814
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 541 (195.5 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 121/318 (38%), Positives = 188/318 (59%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+G+ WL +C+ G + ILADEMGLGKT+Q++ FL L +E + GPFL+ AP
Sbjct: 614 GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAP 673
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI----------NPK--RLYR-RDA 541
S + NW E +CPD + Y G + RMV+R++ PK ++ +
Sbjct: 674 LSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENL 733
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+ + D+ + W +V+DEA +K++ S +K L +N + R+LLTGT
Sbjct: 734 KFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGT 793
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F+ E F FS+ E Q+ +LH +L P
Sbjct: 794 PLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE----------ISKEDQIEKLHNLLGPH 843
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV++ + +K E++V +LS+ Q+ +Y+ I L FD + N ++
Sbjct: 844 MLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNI-----LTRNFD-ALNVKNGGTQMS 897
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI+++L+K CNHP LF
Sbjct: 898 LINIIMELKKCCNHPYLF 915
Score = 335 (123.0 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 77/173 (44%), Positives = 105/173 (60%)
Query: 1008 KPGGPHQLIQEIDSELPVAKPALQLTYQIFGSC---PPMQS--FDPAKLLTDSGKLQTLD 1062
K GG + I EL K Y +C P +++ ++ + L+ ++GK L
Sbjct: 890 KNGGTQMSLINIIMEL---KKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQ 946
Query: 1063 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHR- 1121
+L++L+ HRVL+F+QMT ML+ILED+ + Y+Y R+DGS T R+D + +
Sbjct: 947 KMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPG 1006
Query: 1122 SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+ FVFLLSTRAGGLGINL ADTVI Y+SDWNP D+QA RAHRLGQ V
Sbjct: 1007 AKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1059
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 541 (195.5 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 121/318 (38%), Positives = 188/318 (59%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+G+ WL +C+ G + ILADEMGLGKT+Q++ FL L +E + GPFL+ AP
Sbjct: 614 GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAP 673
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI----------NPK--RLYR-RDA 541
S + NW E +CPD + Y G + RMV+R++ PK ++ +
Sbjct: 674 LSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENL 733
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+ + D+ + W +V+DEA +K++ S +K L +N + R+LLTGT
Sbjct: 734 KFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGT 793
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F+ E F FS+ E Q+ +LH +L P
Sbjct: 794 PLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE----------ISKEDQIEKLHNLLGPH 843
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV++ + +K E++V +LS+ Q+ +Y+ I L FD + N ++
Sbjct: 844 MLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNI-----LTRNFD-ALNVKNGGTQMS 897
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI+++L+K CNHP LF
Sbjct: 898 LINIIMELKKCCNHPYLF 915
Score = 335 (123.0 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 77/173 (44%), Positives = 105/173 (60%)
Query: 1008 KPGGPHQLIQEIDSELPVAKPALQLTYQIFGSC---PPMQS--FDPAKLLTDSGKLQTLD 1062
K GG + I EL K Y +C P +++ ++ + L+ ++GK L
Sbjct: 890 KNGGTQMSLINIIMEL---KKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQ 946
Query: 1063 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHR- 1121
+L++L+ HRVL+F+QMT ML+ILED+ + Y+Y R+DGS T R+D + +
Sbjct: 947 KMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPG 1006
Query: 1122 SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
+ FVFLLSTRAGGLGINL ADTVI Y+SDWNP D+QA RAHRLGQ V
Sbjct: 1007 AKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1059
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 582 (209.9 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 130/354 (36%), Positives = 208/354 (58%)
Query: 427 VQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
V+ P + + G+L++YQL GLQW+++ Y LNGILADEMGLGKT+Q MA +A+L E K
Sbjct: 970 VRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN 1029
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
+GP L++ P +VL NW E+ + P + + Y+ G +++ R + + + F++
Sbjct: 1030 YGPHLIIVPNAVLVNWKSELHTWLPSVSCI-YYVGTKDQ---RSKLFSQEVCAMK--FNV 1083
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
L+T+Y+ ++ D +V W+Y+++DEAQ +K S+ + L + C+ RLLLTGTP+QN
Sbjct: 1084 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 1143
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFSKGIE----SHAEHGGTLNEHQ----LNRLHAI 657
++ ELW+LL+ ++P +FD+ + F++WF++ + +H L + ++RLH I
Sbjct: 1144 DLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1203
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNS--RGHLN 715
L+PFMLRR +DV L K V++ C++S+ Q A Y IK +L D+ R N
Sbjct: 1204 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKN 1263
Query: 716 ---EKKILN-LMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGEL 765
+ KI L N ++LRK CNHP L +Y YF + L G+L
Sbjct: 1264 PIYQAKIYRTLNNRCMELRKACNHPLL-------NYPYFNDFSKDFLVRSCGKL 1310
Score = 311 (114.5 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 63/135 (46%), Positives = 90/135 (66%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F L+ GKL LD +L +L+ HRVLLF+ MTK+L+ILE+Y+ +R+ Y
Sbjct: 1293 PYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYR 1352
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG++++ DR + DF +D F+FLLS RA G G+NL ADTV+ Y+ D NP +
Sbjct: 1353 RIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEE 1412
Query: 1160 QAMDRAHRLGQTKDV 1174
QA+ RAHR+GQT++V
Sbjct: 1413 QAVARAHRIGQTREV 1427
Score = 49 (22.3 bits), Expect = 3.8e-50, Sum P(4) = 3.8e-50
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 834 ASPVKSETFGFTHLMDLSPAEVA 856
ASPV S+ FG +D P V+
Sbjct: 1714 ASPVSSQKFGSLSALDTRPGSVS 1736
Score = 45 (20.9 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 371 AQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
A A ++++ + + S++ A +A M AG GN+ +PS +P++S +
Sbjct: 260 AMQAWARERNIDLSHPANASQM--AHILQARMAAQQKAGEGNVASQSPS-IPISSQPASS 316
Query: 431 ELFKG 435
+ G
Sbjct: 317 SVVPG 321
Score = 38 (18.4 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 13/57 (22%), Positives = 25/57 (43%)
Query: 47 LSYDKLAPSLNLPSFSDIQVEEFYLKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRP 103
L+ L PS + S + + +G S ++ N+ + P+ +VG G+ P
Sbjct: 173 LNMQDLNPSSQPQASSSKPSGDQFARGERQTES-SSQQRNETKSHPQQQVGTGQLMP 228
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 542 (195.9 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 121/318 (38%), Positives = 190/318 (59%)
Query: 427 VQTPELFKGSL--KEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
++ P + +L K YQ GL WL ++ +N ILADEMGLGKT+QA+AFLAHL +
Sbjct: 462 IEQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGD 521
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFH 544
GP LVV PAS ++NW E +++CP + L Y+G +ER LR +I K + F+
Sbjct: 522 S-GPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVE-----FN 575
Query: 545 ILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
+++T+Y ++ D FRR+K + V DE +K+ ++IR++ L++ N R+RLLLTGT
Sbjct: 576 VIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGT 635
Query: 602 PIQNNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
P+QNN+ EL +LL+F+MP +F S + FS +S E + ++ I+KP
Sbjct: 636 PVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQT-IFEKERIAHAKQIMKP 694
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
F+LRRVK +V+ +L K + + C++S +Q+ Y + NK+ + D + +K
Sbjct: 695 FILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKS--IDAT------EKNS 746
Query: 721 NLMNIVIQLRKVCNHPEL 738
L N+++ LRK+ NHP L
Sbjct: 747 ELCNVMMHLRKMANHPLL 764
Score = 321 (118.1 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 62/125 (49%), Positives = 91/125 (72%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
+L+ DSGK L+ LL ++ + RV+LF+Q T ML+I+E ++ + ++RY+RLDG + I
Sbjct: 825 ELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQIS 884
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
+R ++ +F DIF+FLLST+AGGLGINLT+A+ VI ++ D NP D QA DR HR+G
Sbjct: 885 ERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVG 944
Query: 1170 QTKDV 1174
QTK+V
Sbjct: 945 QTKEV 949
Score = 45 (20.9 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 731 KVCNHPELFERNEGSSYL 748
K N+P LF++++G S+L
Sbjct: 51 KRVNNPSLFKKDKGVSFL 68
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 528 (190.9 bits), Expect = 6.9e-77, Sum P(2) = 6.9e-77
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 913
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 914 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 963
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 964 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1017
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1018 LLNIMMDLKKCCNHPYLF 1035
Score = 344 (126.2 bits), Expect = 6.9e-77, Sum P(2) = 6.9e-77
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1046 PSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1105
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1106 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1165
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1166 AFSRAHRIGQANKV 1179
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 528 (190.9 bits), Expect = 7.5e-77, Sum P(2) = 7.5e-77
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 793 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 853 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 913 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 972
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 973 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 1022
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 1023 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1076
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1077 LLNIMMDLKKCCNHPYLF 1094
Score = 344 (126.2 bits), Expect = 7.5e-77, Sum P(2) = 7.5e-77
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1105 PSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1164
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1165 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1224
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1225 AFSRAHRIGQANKV 1238
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 528 (190.9 bits), Expect = 9.6e-77, Sum P(2) = 9.6e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 697 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 756
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 816
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 817 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 876
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 877 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 929
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 930 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 985
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 986 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1018
Score = 342 (125.4 bits), Expect = 9.6e-77, Sum P(2) = 9.6e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1029 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1088
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1089 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1148
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1149 AFSRAHRIGQNKKV 1162
Score = 58 (25.5 bits), Expect = 7.7e-47, Sum P(2) = 7.7e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1846 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1896
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1718 TYEIWHRRHDYWLLAGIINHGYAR 1741
Score = 39 (18.8 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 253 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 296
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 581 FGGDEEKSRKRKNKDPK 597
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 528 (190.9 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 704 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 763
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 823
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 824 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 883
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 884 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 936
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 937 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 992
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 993 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1025
Score = 342 (125.4 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1036 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1095
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1096 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1155
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1156 AFSRAHRIGQNKKV 1169
Score = 58 (25.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1853 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1903
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1725 TYEIWHRRHDYWLLAGIINHGYAR 1748
Score = 39 (18.8 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 260 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 303
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 588 FGGDEEKSRKRKNKDPK 604
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+ P + KIPK Q+ + +LC +G S E F + E V ++ S + GSD
Sbjct: 58 KKPRDPKIPKSKRQK--KERMLLCRQLGDS-SGE--GPEF-VEEEEEV--ALRSDSEGSD 109
Query: 834 ASPVKSE 840
+P K +
Sbjct: 110 YTPGKKK 116
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 528 (190.9 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 704 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 763
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 823
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 824 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 883
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 884 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 936
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 937 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 992
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 993 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1025
Score = 342 (125.4 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1036 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1095
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1096 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1155
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1156 AFSRAHRIGQNKKV 1169
Score = 58 (25.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1853 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1903
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1725 TYEIWHRRHDYWLLAGIINHGYAR 1748
Score = 39 (18.8 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 260 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 303
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 588 FGGDEEKSRKRKNKDPK 604
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+ P + KIPK Q+ + +LC +G S E F + E V ++ S + GSD
Sbjct: 58 KKPRDPKIPKSKRQK--KERMLLCRQLGDS-SGE--GPEF-VEEEEEV--ALRSDSEGSD 109
Query: 834 ASPVKSE 840
+P K +
Sbjct: 110 YTPGKKK 116
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 528 (190.9 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 704 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 763
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 823
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 824 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 883
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 884 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 936
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 937 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 992
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 993 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1025
Score = 342 (125.4 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1036 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1095
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1096 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1155
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1156 AFSRAHRIGQNKKV 1169
Score = 58 (25.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1853 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1903
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1725 TYEIWHRRHDYWLLAGIINHGYAR 1748
Score = 39 (18.8 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 260 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 303
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 588 FGGDEEKSRKRKNKDPK 604
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+ P + KIPK Q+ + +LC +G S E F + E V ++ S + GSD
Sbjct: 58 KKPRDPKIPKSKRQK--KERVLLCRQLGDS-SGE--GPEF-VEEEEEV--ALRSDSEGSD 109
Query: 834 ASPVKSE 840
+P K +
Sbjct: 110 YTPGKKK 116
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 528 (190.9 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 697 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 756
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 816
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 817 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 876
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 877 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 929
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 930 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 985
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 986 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1018
Score = 342 (125.4 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1029 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1088
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1089 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1148
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1149 AFSRAHRIGQNKKV 1162
Score = 58 (25.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1856 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1906
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1728 TYEIWHRRHDYWLLAGIINHGYAR 1751
Score = 40 (19.1 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 755 NSLLPPPFGELED 767
N+ LPPP E ED
Sbjct: 25 NNSLPPPHPENED 37
Score = 39 (18.8 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 253 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 296
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 581 FGGDEEKSRKRKNKDPK 597
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 528 (190.9 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 697 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 756
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 816
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 817 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 876
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 877 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 929
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 930 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 985
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 986 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1018
Score = 342 (125.4 bits), Expect = 9.7e-77, Sum P(2) = 9.7e-77
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1029 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1088
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1089 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1148
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1149 AFSRAHRIGQNKKV 1162
Score = 58 (25.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1856 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1906
Score = 44 (20.5 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1728 TYEIWHRRHDYWLLAGIINHGYAR 1751
Score = 39 (18.8 bits), Expect = 9.3e-25, Sum P(2) = 9.3e-25
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 253 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 296
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 581 FGGDEEKSRKRKNKDPK 597
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 528 (190.9 bits), Expect = 9.9e-77, Sum P(2) = 9.9e-77
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 690 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 749
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 750 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 809
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 810 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 869
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 870 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 919
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 920 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 973
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 974 LLNIMMDLKKCCNHPYLF 991
Score = 342 (125.4 bits), Expect = 9.9e-77, Sum P(2) = 9.9e-77
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1002 PSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1061
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1062 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1121
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1122 AFSRAHRIGQANKV 1135
Score = 37 (18.1 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1006 PRKPG-GPHQLIQEIDSELPVAKP 1028
P + G G L+++ D+E P KP
Sbjct: 1516 PSEKGDGVRTLLEKDDTENPEEKP 1539
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 528 (190.9 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 724 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 783
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 784 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 843
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 844 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 903
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 904 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 956
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 957 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 1012
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 1013 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1045
Score = 342 (125.4 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1056 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1115
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1116 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1175
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1176 AFSRAHRIGQNKKV 1189
Score = 58 (25.5 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1873 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1923
Score = 44 (20.5 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1745 TYEIWHRRHDYWLLAGIINHGYAR 1768
Score = 39 (18.8 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 280 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 323
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 608 FGGDEEKSRKRKNKDPK 624
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+ P + KIPK Q+ + +LC +G S E F + E V ++ S + GSD
Sbjct: 78 KKPRDPKIPKSKRQK--KERMLLCRQLGDS-SGE--GPEF-VEEEEEV--ALRSDSEGSD 129
Query: 834 ASPVKSE 840
+P K +
Sbjct: 130 YTPGKKK 136
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 528 (190.9 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 726 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 785
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 786 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 845
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 846 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 905
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 906 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 958
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 959 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 1014
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 1015 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1047
Score = 342 (125.4 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1058 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1117
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1118 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1177
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1178 AFSRAHRIGQNKKV 1191
Score = 58 (25.5 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1875 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1925
Score = 44 (20.5 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1747 TYEIWHRRHDYWLLAGIINHGYAR 1770
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 610 FGGDEEKSRKRKNKDPK 626
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+ P + KIPK Q+ + +LC +G S E F + E V ++ S + GSD
Sbjct: 78 KKPRDPKIPKSKRQK--KERLLLCRQLGDS-SGE--GPEF-VEEEEEV--ALRSDSEGSD 129
Query: 834 ASPVKSE 840
+P K +
Sbjct: 130 YTPGKKK 136
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 528 (190.9 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 126/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQ++GL WL + QG + ILADEMGLGKT+Q
Sbjct: 725 PTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 784
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 785 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSF 844
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 845 EDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 904
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 905 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 957
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 958 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 1013
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 1014 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 1046
Score = 342 (125.4 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1057 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1116
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI Y+SDWNP D+Q
Sbjct: 1117 IDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1176
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ K V
Sbjct: 1177 AFSRAHRIGQNKKV 1190
Score = 58 (25.5 bits), Expect = 8.2e-47, Sum P(2) = 8.2e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1890 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEP 1940
Score = 44 (20.5 bits), Expect = 2.4e-45, Sum P(2) = 2.4e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1762 TYEIWHRRHDYWLLAGIINHGYAR 1785
Score = 40 (19.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 755 NSLLPPPFGELED 767
N+ LPPP E ED
Sbjct: 46 NNSLPPPHPENED 58
Score = 39 (18.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 998 ARTSENIGP---RKPGGPHQLIQEIDSELPVAKPALQLTYQI--FGS 1039
A+T E GP RKP G ++ D++ P K L ++ FGS
Sbjct: 281 AKTKEGKGPNARRKPKGSPRVP---DAKKPKPKKVAPLKIKLGGFGS 324
Score = 38 (18.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 609 FGGDEEKSRKRKNKDPK 625
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 528 (190.9 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 732 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 791
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 792 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 851
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 852 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 911
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 912 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 961
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 962 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1015
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1016 LLNIMMDLKKCCNHPYLF 1033
Score = 342 (125.4 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1044 PSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1103
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1104 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1163
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1164 AFSRAHRIGQANKV 1177
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 528 (190.9 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 913
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 914 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 963
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 964 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1017
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1018 LLNIMMDLKKCCNHPYLF 1035
Score = 342 (125.4 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1046 PSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1105
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1106 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1165
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1166 AFSRAHRIGQANKV 1179
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 528 (190.9 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 964
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 965 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 1014
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 1015 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1068
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1069 LLNIMMDLKKCCNHPYLF 1086
Score = 342 (125.4 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1097 PSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1156
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1157 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1216
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1217 AFSRAHRIGQANKV 1230
Score = 37 (18.1 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1006 PRKPG-GPHQLIQEIDSELPVAKP 1028
P + G G L+++ D+E P KP
Sbjct: 1611 PSEKGDGVRTLLEKDDTENPEEKP 1634
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 528 (190.9 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 125/318 (39%), Positives = 187/318 (58%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G+L YQL+GL WL + QG + ILADEMGLGKTIQ + FL L +E + GPFLV AP
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI-----NP----KRLYR--RDAG- 542
S + NW E + P + Y G R ++R+N N K+ ++ R+A
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 543 -FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+L+ D+ ++W +V+DEA +K++ S ++ L + ++LLLTGT
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 964
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QNN+ EL+ LL+F+ P F++ E F E F+ E Q+ +LH +L P
Sbjct: 965 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD----------ISKEDQIKKLHDLLGPH 1014
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
MLRR+K DV + KTE++V +LS Q+ +Y+ I + + L NSRG N+ ++
Sbjct: 1015 MLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR-NFEAL--NSRGGGNQ---VS 1068
Query: 722 LMNIVIQLRKVCNHPELF 739
L+NI++ L+K CNHP LF
Sbjct: 1069 LLNIMMDLKKCCNHPYLF 1086
Score = 342 (125.4 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 67/134 (50%), Positives = 93/134 (69%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +++ L+ SGKL L +L++L+ + HRVL+F+QMTKML++LED+++Y Y+Y R
Sbjct: 1097 PSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYER 1156
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DG T R++ + F + F FLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 1157 IDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQ 1216
Query: 1161 AMDRAHRLGQTKDV 1174
A RAHR+GQ V
Sbjct: 1217 AFSRAHRIGQANKV 1230
Score = 37 (18.1 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1006 PRKPG-GPHQLIQEIDSELPVAKP 1028
P + G G L+++ D+E P KP
Sbjct: 1611 PSEKGDGVRTLLEKDDTENPEEKP 1634
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 507 (183.5 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
Identities = 117/311 (37%), Positives = 177/311 (56%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L +Q++G+ WL + QG+ ILADEMGLGKTIQ + FL L +E + GPFL+ P S
Sbjct: 267 LHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLS 326
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN------INPKRLYRRDAG--FHILIT 548
L NW E+ + P+L + Y GG R V+RK+ + K + F++++T
Sbjct: 327 TLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLT 386
Query: 549 SYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMA 608
SY+ + D + + W +V+DEA ++S+ S ++ L + +LLLTGTP+QNN+
Sbjct: 387 SYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLE 446
Query: 609 ELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKK 668
EL+ LL+F+ F+ + F AE E Q+ RLH IL+P MLRR+K
Sbjct: 447 ELFHLLNFLSSGKFNDLQTFQ----------AEFTDVSKEEQVKRLHEILEPHMLRRLKA 496
Query: 669 DVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQ 728
DV+ + K+E +V +LSS Q+ FY+ I K + L N +G ++ +L+NI++
Sbjct: 497 DVLKSMPPKSEFIVRVELSSMQKKFYKHILTK-NFKAL--NQKGG---GRVCSLLNIMMD 550
Query: 729 LRKVCNHPELF 739
LRK CNHP LF
Sbjct: 551 LRKCCNHPYLF 561
Score = 348 (127.6 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
Identities = 74/142 (52%), Positives = 96/142 (67%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P ++ + L SGKL L +LK+L+A+NHRVLLF+QMTKMLN+LE ++ Y+Y R
Sbjct: 572 PSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDR 631
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
+DGS R+ + F S+ FVFLLSTRAGGLGINL ADTVI ++SDWNP D+Q
Sbjct: 632 IDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQ 691
Query: 1161 AMDRAHRLGQTKDVSSWLKLCH 1182
A RAHR+GQ K V + + H
Sbjct: 692 AFSRAHRMGQKKKVMIYRFVTH 713
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 524 (189.5 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 538
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 539 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 595
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 596 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 655
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 656 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 704
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 705 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 750
Score = 329 (120.9 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 70/125 (56%), Positives = 89/125 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS +
Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIGEL- 839
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 840 RRQALDHFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 899
Query: 1170 QTKDV 1174
Q K V
Sbjct: 900 QKKQV 904
Score = 149 (57.5 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 661 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 715
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 716 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 769
Query: 746 SY 747
+
Sbjct: 770 EF 771
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 557 (201.1 bits), Expect = 1.7e-76, Sum P(3) = 1.7e-76
Identities = 125/323 (38%), Positives = 188/323 (58%)
Query: 379 KMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTS--TVQTPELFKGS 436
++L+N D+ + AA T + + D N + P S V P++
Sbjct: 484 EILSNAEDSTINTTTTAATTSTTTTTTII--NNKKDKKNNNNGPTFSHKLVAQPKIINKV 541
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
++ YQL GL W+ Y++ +NGILADEMGLGKT+Q ++ LAH+ E N GP LVV PA+
Sbjct: 542 MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKEAYNDNGPHLVVVPAT 601
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA- 555
+L NW E +CP L + Y+G L+ER LR + KR +D F++++T+Y LL A
Sbjct: 602 ILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRP-GKD--FNVILTTYNLLFAN 658
Query: 556 -DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D + +R + +++LDEAQ IK+S+S R+K + +RLLLTGTP+QNN+ ELW+LL
Sbjct: 659 NDRGFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRLLLTGTPLQNNLYELWSLL 718
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
+F+MP +F S ++ N ++ +E + G + + R+ IL PF+LRR+K V EL
Sbjct: 719 NFLMPHIFGSVKKDNYLLNQLLE----YNGDDCDSAITRMKKILSPFILRRLKSTVSKEL 774
Query: 675 TTKTEVMVHCKLSSRQQAFYQAI 697
K E + CKL Q Y+ I
Sbjct: 775 KPKIEHVEICKLPKFQDETYKNI 797
Score = 293 (108.2 bits), Expect = 1.7e-76, Sum P(3) = 1.7e-76
Identities = 58/122 (47%), Positives = 85/122 (69%)
Query: 1053 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR 1112
T + L+ +IL K + +VL+F+QMT++L+ILED ++ Y + RLDGS+ + +R+
Sbjct: 982 TSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQ 1041
Query: 1113 DMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1172
++ F + I VFLLST +GGLGINLT A+ VIFY+ +NP +D QA DRAHRLGQ +
Sbjct: 1042 SIIDHFSSKETIPVFLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQER 1101
Query: 1173 DV 1174
+V
Sbjct: 1102 EV 1103
Score = 55 (24.4 bits), Expect = 1.7e-76, Sum P(3) = 1.7e-76
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 722 LMNIVIQLRKVCNHPEL 738
L NI++QLRK NHP L
Sbjct: 895 LNNILMQLRKAANHPLL 911
Score = 48 (22.0 bits), Expect = 7.3e-50, Sum P(2) = 7.3e-50
Identities = 13/66 (19%), Positives = 34/66 (51%)
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNL 722
L + ++ +I +L + V ++ S+ Q+ + + + + G F+N+ L K IL +
Sbjct: 1097 LGQEREVIIYKLLAENTVDINIHESANQK---KKLNDNVLEEGTFNNAETKLQSKNILKI 1153
Query: 723 MNIVIQ 728
++ + +
Sbjct: 1154 LDSIFK 1159
Score = 38 (18.4 bits), Expect = 8.2e-49, Sum P(2) = 8.2e-49
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
SG+ +IL++ +A NH LL + N ++D +N+
Sbjct: 890 SGQFVLNNILMQLRKAANHP-LLCKNIFYNDNQIQDIVNH 928
Score = 37 (18.1 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 167 ETYE-IIERALPXXXXXXXDPSVIEKEEMEKIGKVWVNIVRKDIPK 211
ETY+ IIER+ EKEE EK + +N I K
Sbjct: 792 ETYKNIIERSKSQWKLRNELLLKKEKEEKEKEKQSLINSSNSSIKK 837
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 495 (179.3 bits), Expect = 4.4e-76, Sum P(2) = 4.4e-76
Identities = 105/266 (39%), Positives = 165/266 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL+G+ WL + IL DEMGLGKT Q +A +LA N GPFL++ P S
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ RF P L + Y G +ER L++++ ++++ FH+L+T+Y++ + D
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL------KQESRFHVLLTTYEICLKD 159
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ +S+ KTL F+ LLLTGTPIQN++ EL++LL F
Sbjct: 160 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 617 IMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
+ P LF S E+ ++ + IE +E + LH +L+PF+LRRVK +V +EL
Sbjct: 220 VEPDLF-SKEEVGDFIQRYQDIEKESESA--------SELHKLLQPFLLRRVKAEVATEL 270
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNK 700
KTEV+++ +S+ Q+ +Y+AI K
Sbjct: 271 PKKTEVVIYHGMSALQKKYYKAILMK 296
Score = 356 (130.4 bits), Expect = 4.4e-76, Sum P(2) = 4.4e-76
Identities = 79/140 (56%), Positives = 100/140 (71%)
Query: 1036 IFGSCPPMQSFDPAKLLTD-SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P + F+ LT+ SGKL LD LL L + HRVLLF+QMT+ML+IL+DYM+Y
Sbjct: 327 LFDGVEP-EPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDY 385
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
R Y Y R+DGS +R +++F + IFVFLLSTRAGG+G+NLTAADTVIF +SD+N
Sbjct: 386 RGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFN 444
Query: 1155 PTLDLQAMDRAHRLGQTKDV 1174
P DLQA RAHR+GQ K V
Sbjct: 445 PQNDLQAAARAHRIGQNKSV 464
Score = 342 (125.4 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 79/205 (38%), Positives = 127/205 (61%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
++++ FH+L+T+Y++ + D + + W +V+DEA +K+ +S+ KTL F+ LL
Sbjct: 141 KQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLL 200
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLH 655
LTGTPIQN++ EL++LL F+ P LF S E+ ++ + IE +E + LH
Sbjct: 201 LTGTPIQNSLQELYSLLSFVEPDLF-SKEEVGDFIQRYQDIEKESESA--------SELH 251
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRRVK +V +EL KTEV+++ +S+ Q+ +Y+AI K A F+N
Sbjct: 252 KLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDA--FENETA--- 306
Query: 716 EKKILNLMNIVIQLRKVCNHPELFE 740
KK+ L NI+ QLRK +HP LF+
Sbjct: 307 -KKV-KLQNILSQLRKCVDHPYLFD 329
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 532 (192.3 bits), Expect = 5.8e-76, Sum P(2) = 5.8e-76
Identities = 114/289 (39%), Positives = 178/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 477 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + P + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 593
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 594 KDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 653
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 654 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 702
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 703 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 748
Score = 329 (120.9 bits), Expect = 5.8e-76, Sum P(2) = 5.8e-76
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 779 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 838
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 839 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 898
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 899 QKKQVN 904
Score = 148 (57.2 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 659 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 713
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 714 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDDN 767
Query: 746 SY 747
+
Sbjct: 768 EF 769
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 496 (179.7 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 105/266 (39%), Positives = 165/266 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL+G+ WL C+ IL DEMGLGKT Q +A +LA N GPFL++ P S
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ RF P L + Y G +R L++++ ++++ FH+L+T+Y++ + D
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL------KQESRFHVLLTTYEICLKD 161
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ +S+ KTL F+ LLLTGTPIQN++ EL++LL F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 617 IMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
+ P LF S EQ ++ + IE +E + L+ +L+PF+LRRVK +V +EL
Sbjct: 222 VEPDLF-SKEQVEDFVQRYQDIEKESESA--------SELYKLLQPFLLRRVKAEVATEL 272
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNK 700
KTEV+++ +S+ Q+ +Y+AI K
Sbjct: 273 PRKTEVVIYHGMSALQKKYYKAILMK 298
Score = 351 (128.6 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 73/124 (58%), Positives = 94/124 (75%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL L ++ HRVLLF+QMT+ML+IL+DY++YR Y Y R+DGS +
Sbjct: 344 LIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEE 403
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R +++F + IF FLLSTRAGG+G+NLTAADTVIF++SD+NP DLQA RAHR+GQ
Sbjct: 404 RHLAIKNFGQQP-IFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQ 462
Query: 1171 TKDV 1174
K V
Sbjct: 463 NKSV 466
Score = 337 (123.7 bits), Expect = 4.6e-58, Sum P(2) = 4.6e-58
Identities = 78/205 (38%), Positives = 127/205 (61%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
++++ FH+L+T+Y++ + D + + W +V+DEA +K+ +S+ KTL F+ LL
Sbjct: 143 KQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLL 202
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLH 655
LTGTPIQN++ EL++LL F+ P LF S EQ ++ + IE +E + L+
Sbjct: 203 LTGTPIQNSLQELYSLLSFVEPDLF-SKEQVEDFVQRYQDIEKESESA--------SELY 253
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRRVK +V +EL KTEV+++ +S+ Q+ +Y+AI K A F+N
Sbjct: 254 KLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDA--FENETA--- 308
Query: 716 EKKILNLMNIVIQLRKVCNHPELFE 740
KK+ L N++ QLRK +HP LF+
Sbjct: 309 -KKV-KLQNVLSQLRKCVDHPYLFD 331
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 526 (190.2 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 545
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 546 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 600
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 601 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 660
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 661 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 709
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 710 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 767
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 768 YLI-KPPEENERENGQEIL 785
Score = 322 (118.4 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 788 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 908 QKKQVN 913
Score = 37 (18.1 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 375 QYQIVERVIAVKTSKSTLGQT 395
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 541 (195.5 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 132/336 (39%), Positives = 190/336 (56%)
Query: 419 STMPVTSTVQTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
S P T Q L LK YQL G+ WL Y+Q L+GILADEMGLGKT Q +AF A
Sbjct: 531 SDFPKFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFA 590
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
L E+ + GP LVV P+S L NW E++RFCP L+ PY+G QER +R+ I +
Sbjct: 591 LLLEQGH-HGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIK 649
Query: 538 RRDAGFHILITSYQLLV---ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRN 594
+ IL+T+YQL D + + + V DE +K+ S R+K L++ N
Sbjct: 650 -----YDILVTTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANF 704
Query: 595 RLLLTGTPIQNNMAELWALLHFIMPTLFDSH-EQFNEWFSKGIESHAE-HGGTLNEHQLN 652
RLLLTGTP+QNN+ EL +LL FI+P +FDS + + F + A+ L++ +++
Sbjct: 705 RLLLTGTPLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRIS 764
Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQ---AI-KNKISLAGLFD 708
R ++ PF+LRR K V+++L KT+++ HCKLS Q Y A+ KN+
Sbjct: 765 RAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKR 824
Query: 709 NSRGHLNEK---KILNLMNIVIQLRKVCNHPELFER 741
N R +E+ K L+ ++++QLRK NH LF +
Sbjct: 825 NKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRK 860
Score = 321 (118.1 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 67/146 (45%), Positives = 98/146 (67%)
Query: 1034 YQIFGSCPPMQSF----DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1089
+++ S P +QS+ DP DSGK++ L LL +++ E R+LLF+Q T+ML+ILE
Sbjct: 901 HRLCRSFPTLQSYTLKDDP---WMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILE 957
Query: 1090 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFY 1149
++ K Y+RLDGS+ + R+D++ F D+ VFLLST+AGG GINL A+ VI Y
Sbjct: 958 QVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACANVVILY 1017
Query: 1150 ESDWNPTLDLQAMDRAHRLGQTKDVS 1175
+ +NP DLQA DRAHR+GQ ++V+
Sbjct: 1018 DCSYNPFDDLQAEDRAHRVGQVREVT 1043
Score = 37 (18.1 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 390 SKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
S R +A + A S S + + +T PV +T+ TP
Sbjct: 202 SNSRSSARSTARSAPRSTQRSRSSSANPVTTPPVNNTLLTP 242
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 522 (188.8 bits), Expect = 2.2e-75, Sum P(2) = 2.2e-75
Identities = 134/389 (34%), Positives = 218/389 (56%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 34 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 91
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 92 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 150
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 151 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 210
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 211 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 260
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 261 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 315
Query: 728 QLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV-- 785
+LRK CNHP L E F E + ++P F + +G I+ +PK+
Sbjct: 316 ELRKCCNHPYLINGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 374
Query: 786 -HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 375 GHKVLIFSQMVRCLDI---LEDYLIQRRY 400
Score = 319 (117.4 bits), Expect = 2.2e-75, Sum P(2) = 2.2e-75
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 354 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 413
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 414 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 473
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 474 QSKAV 478
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 498 (180.4 bits), Expect = 2.7e-75, Sum P(2) = 2.7e-75
Identities = 107/264 (40%), Positives = 165/264 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL G++WL C + IL DEMGLGKT Q ++ LA+ + GPFLV+ P +
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL NW E+ RFCP L + Y G ++R L++N+ + D FH+L+T+Y++ + D
Sbjct: 95 VLENWRQELERFCPSLSVICYTGDKEKRAELQQNL------KSDPRFHVLLTTYEMCLKD 148
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+Y + KW+ +V+DEA +K+ S+ +TL F R+LLTGTPIQNN+ E+++LL F
Sbjct: 149 ARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTF 208
Query: 617 IMPTLF--DSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRRVKKDVISE 673
I P++F ++ E F + ++A+ E L + LH +L+PF+LRRVK +V +E
Sbjct: 209 IQPSVFLPEAVEDF-------VNAYAD---IQTEPALVDELHQVLQPFLLRRVKAEVAAE 258
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAI 697
L KTE++V LS+ Q+ +Y+AI
Sbjct: 259 LPKKTELVVFHGLSALQKRYYKAI 282
Score = 349 (127.9 bits), Expect = 2.7e-75, Sum P(2) = 2.7e-75
Identities = 73/140 (52%), Positives = 99/140 (70%)
Query: 1036 IFGSCPPMQSFDPAKLLTD-SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P + F+ + L + SGKL LD +L L+ H VLLF+QMT+ML+IL+DY+ Y
Sbjct: 316 LFDGVEP-EPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEY 374
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
R Y Y RLDGS +R +++F + D+F+FLLST+AGG+G+NLTAADTVIF + D+N
Sbjct: 375 RGYSYERLDGSVRGEERNLAIKNFSTK-DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFN 433
Query: 1155 PTLDLQAMDRAHRLGQTKDV 1174
P DLQA RAHR+GQT+ V
Sbjct: 434 PQNDLQAAARAHRIGQTRPV 453
Score = 332 (121.9 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
Identities = 79/206 (38%), Positives = 127/206 (61%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ D FH+L+T+Y++ + D +Y + KW+ +V+DEA +K+ S+ +TL F R+L
Sbjct: 130 KSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVL 189
Query: 598 LTGTPIQNNMAELWALLHFIMPTLF--DSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRL 654
LTGTPIQNN+ E+++LL FI P++F ++ E F + ++A+ E L + L
Sbjct: 190 LTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDF-------VNAYAD---IQTEPALVDEL 239
Query: 655 HAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHL 714
H +L+PF+LRRVK +V +EL KTE++V LS+ Q+ +Y+AI L D R
Sbjct: 240 HQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAI-----LMRDLDAFRTDQ 294
Query: 715 NEKKILNLMNIVIQLRKVCNHPELFE 740
+ K L+N+++QLRK +HP LF+
Sbjct: 295 STKT--RLLNVLMQLRKCVDHPYLFD 318
Score = 37 (18.1 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 108 LQARLKALVASNSPQKFSLKV 128
L R+KA VA+ P+K L V
Sbjct: 247 LLRRVKAEVAAELPKKTELVV 267
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 501 (181.4 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 112/311 (36%), Positives = 181/311 (58%)
Query: 415 LHNPSTMPVTSTVQTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAM 473
++ P+ +P+ + P+ SLKE+Q++G WL C+ + +LADEMGLGKTIQ++
Sbjct: 875 VNRPTKLPIFNNELVPKFQDNLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSI 934
Query: 474 AFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NIN 532
AFL +L++ I GPFLVVAP S L NW EI ++ +KTL ++G + R + K
Sbjct: 935 AFLQYLSQSVGIKGPFLVVAPLSTLGNWHKEILKWTK-MKTLVFYGSQETRGFISKYEFK 993
Query: 533 PKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNC 592
K Y F +L+T+Y+ +++D F RV W+ ++LDE IK+ S L S
Sbjct: 994 HKDTYL----FEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKT 1049
Query: 593 RNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN 652
+ ++LTGTP+QN+M ELW +L+F+ P F+S ++F + E+ E Q++
Sbjct: 1050 EHSIILTGTPLQNDMKELWTMLNFLDPDKFNSCQEFLD----------EYSDLKEESQVS 1099
Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG 712
+LH +L P++LRR+K+DV + K E ++ +LSS Q+ +Y+AI + + L +
Sbjct: 1100 KLHQLLSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILER-NREFLSRGIKQ 1158
Query: 713 HLNEKKILNLM 723
N K+ N+M
Sbjct: 1159 KTNLPKLSNIM 1169
Score = 360 (131.8 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 73/125 (58%), Positives = 93/125 (74%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ S KL +D LL+RL+AE H+VL+F+QM + LNILEDY+ YR+Y Y RLDGS
Sbjct: 1205 LVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEV 1264
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + FQ + ++ FVFLLSTRAGG+GINLT ADTVI ++SDWNP DLQA R HR+G
Sbjct: 1265 RQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIG 1324
Query: 1170 QTKDV 1174
QT +V
Sbjct: 1325 QTNNV 1329
Score = 342 (125.4 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
Identities = 76/205 (37%), Positives = 121/205 (59%)
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F +L+T+Y+ +++D F RV W+ ++LDE IK+ S L S + ++LTGTP
Sbjct: 1000 FEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTP 1059
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFM 662
+QN+M ELW +L+F+ P F+S ++F + E+ E Q+++LH +L P++
Sbjct: 1060 LQNDMKELWTMLNFLDPDKFNSCQEFLD----------EYSDLKEESQVSKLHQLLSPYL 1109
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLAGLFDNSRGHLNEKKIL 720
LRR+K+DV + K E ++ +LSS Q+ +Y+AI +N+ L SRG + +
Sbjct: 1110 LRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFL------SRGIKQKTNLP 1163
Query: 721 NLMNIVIQLRKVCNHPELFERNEGS 745
L NI+IQ+RKVCNHP L E S
Sbjct: 1164 KLSNIMIQIRKVCNHPFLIPGAEES 1188
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 524 (189.5 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 113/287 (39%), Positives = 174/287 (60%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
L +W EI + + + Y G + R ++R + +R F+IL+T+Y++L+ D
Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKR-LKFNILLTTYEILLKD 599
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LLHF
Sbjct: 600 KAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF 659
Query: 617 IMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTT 676
IMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 660 IMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSLPA 708
Query: 677 KTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 709 KVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 752
Score = 329 (120.9 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 902
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 903 QKKQVN 908
Score = 149 (57.5 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 663 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 717
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 718 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 771
Query: 746 SY 747
+
Sbjct: 772 EF 773
Score = 37 (18.1 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1294 DKKPQAKQLQTRADYLIKLLS 1314
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 524 (189.5 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 480 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 539
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 540 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 596
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 597 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 656
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 657 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 705
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 706 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 751
Score = 329 (120.9 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 782 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 841
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 842 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 901
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 902 QKKQVN 907
Score = 149 (57.5 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 662 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 716
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 717 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 770
Query: 746 SY 747
+
Sbjct: 771 EF 772
Score = 37 (18.1 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1293 DKKPQAKQLQTRADYLIKLLS 1313
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 524 (189.5 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 538
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 539 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 595
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 596 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 655
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 656 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 704
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 705 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 750
Score = 329 (120.9 bits), Expect = 4.3e-75, Sum P(2) = 4.3e-75
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 841 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 900
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 901 QKKQVN 906
Score = 149 (57.5 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 661 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 715
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 716 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 769
Query: 746 SY 747
+
Sbjct: 770 EF 771
Score = 37 (18.1 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1292 DKKPQAKQLQTRADYLIKLLS 1312
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 524 (189.5 bits), Expect = 4.9e-75, Sum P(2) = 4.9e-75
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 463 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 522
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 523 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 579
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 580 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 639
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 640 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 688
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 689 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 734
Score = 329 (120.9 bits), Expect = 4.9e-75, Sum P(2) = 4.9e-75
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 765 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 824
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 825 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 884
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 885 QKKQVN 890
Score = 149 (57.5 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 645 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 699
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 700 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 753
Query: 746 SY 747
+
Sbjct: 754 EF 755
Score = 37 (18.1 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1276 DKKPQAKQLQTRADYLIKLLS 1296
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 524 (189.5 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 493 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 552
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 553 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 609
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 610 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 669
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 670 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 718
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 719 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 764
Score = 329 (120.9 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 795 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 854
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 855 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 914
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 915 QKKQVN 920
Score = 149 (57.5 bits), Expect = 6.1e-35, Sum P(2) = 6.1e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 675 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 729
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 730 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 783
Query: 746 SY 747
+
Sbjct: 784 EF 785
Score = 37 (18.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1304 DKKPQAKQLQTRADYLIKLLS 1324
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 783 (280.7 bits), Expect = 5.9e-75, Sum P(2) = 5.9e-75
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 609 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 668
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 669 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 722
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 723 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 782
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 783 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 842
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 895
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 896 VINILMQLRKVCNHPNLFD 914
Score = 47 (21.6 bits), Expect = 5.9e-75, Sum P(2) = 5.9e-75
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 526 (190.2 bits), Expect = 6.4e-75, Sum P(2) = 6.4e-75
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 484 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 598
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 599 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWS 658
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 659 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 707
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 708 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 765
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 766 YLI-KPPEENERENGQEVL 783
Score = 322 (118.4 bits), Expect = 6.4e-75, Sum P(2) = 6.4e-75
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 905
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 906 QKKQVN 911
Score = 37 (18.1 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 376 QYQIVERVIAVKTSKSTLGQT 396
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 534 (193.0 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 123/323 (38%), Positives = 192/323 (59%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G L YQL+GL WL +C+ G + ILADEMGLGKT+Q++ FL L +E + GPFL+ AP
Sbjct: 600 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN----------INPKRLYRR---DA 541
S + NW E ++CPD + Y G R+VLR++ PK + +
Sbjct: 660 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENM 719
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+ + D+ ++W +V+DEA +K++ S+ +K L + R+LLTGT
Sbjct: 720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 779
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESH-AEHGGTLNEHQLNRLHAILKP 660
P+QNN+ EL+ LL+F+ S E+FN+ +E+ AE E Q+ +LH +L P
Sbjct: 780 PLQNNLEELFHLLNFL------SKERFNQ-----LEAFTAEFNEISKEDQIEKLHNLLGP 828
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
MLRR+K DV++ + +K+E++V +LS+ Q+ +Y+ I L FD + N +
Sbjct: 829 HMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNI-----LTRNFD-ALNVKNGGTQM 882
Query: 721 NLMNIVIQLRKVCNHPELFERNE 743
+LMN++++L+K CNHP LF + E
Sbjct: 883 SLMNVLMELKKCCNHPYLFVKAE 905
Score = 332 (121.9 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 78/189 (41%), Positives = 107/189 (56%)
Query: 989 WLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVA--KPALQLTYQIFGSCPPMQSF 1046
W K +L R + + K GG + + EL P L + ++ +
Sbjct: 861 WYKNIL---TRNFDALNV-KNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMY 916
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
+ L+ +SGK L +L++L+ HRVL+F+QMT+ML+I+ED Y YRY R+DGS
Sbjct: 917 EGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSI 976
Query: 1107 TIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1165
R+D + + + F+FLLSTRAGGLGINL ADTVI Y+SDWNP D+QA RA
Sbjct: 977 MGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRA 1036
Query: 1166 HRLGQTKDV 1174
HRLGQ V
Sbjct: 1037 HRLGQKHKV 1045
Score = 37 (18.1 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 185 DPSVIEKEEMEKIGKV 200
DPS+++ EE + G V
Sbjct: 6 DPSLVDAEESMEEGSV 21
Score = 37 (18.1 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 794 EILCSAVGHGISRELFQKRFNIFSAENVYQ 823
E+ A G I + Q+RF + V +
Sbjct: 1570 EVGAEATGSDIKAKFMQRRFKLIEQSLVIE 1599
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 534 (193.0 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 123/323 (38%), Positives = 192/323 (59%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G L YQL+GL WL +C+ G + ILADEMGLGKT+Q++ FL L +E + GPFL+ AP
Sbjct: 600 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN----------INPKRLYRR---DA 541
S + NW E ++CPD + Y G R+VLR++ PK + +
Sbjct: 660 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENM 719
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+L+TSY+ + D+ ++W +V+DEA +K++ S+ +K L + R+LLTGT
Sbjct: 720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 779
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESH-AEHGGTLNEHQLNRLHAILKP 660
P+QNN+ EL+ LL+F+ S E+FN+ +E+ AE E Q+ +LH +L P
Sbjct: 780 PLQNNLEELFHLLNFL------SKERFNQ-----LEAFTAEFNEISKEDQIEKLHNLLGP 828
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
MLRR+K DV++ + +K+E++V +LS+ Q+ +Y+ I L FD + N +
Sbjct: 829 HMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNI-----LTRNFD-ALNVKNGGTQM 882
Query: 721 NLMNIVIQLRKVCNHPELFERNE 743
+LMN++++L+K CNHP LF + E
Sbjct: 883 SLMNVLMELKKCCNHPYLFVKAE 905
Score = 332 (121.9 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 78/189 (41%), Positives = 107/189 (56%)
Query: 989 WLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVA--KPALQLTYQIFGSCPPMQSF 1046
W K +L R + + K GG + + EL P L + ++ +
Sbjct: 861 WYKNIL---TRNFDALNV-KNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMY 916
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
+ L+ +SGK L +L++L+ HRVL+F+QMT+ML+I+ED Y YRY R+DGS
Sbjct: 917 EGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSI 976
Query: 1107 TIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1165
R+D + + + F+FLLSTRAGGLGINL ADTVI Y+SDWNP D+QA RA
Sbjct: 977 MGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRA 1036
Query: 1166 HRLGQTKDV 1174
HRLGQ V
Sbjct: 1037 HRLGQKHKV 1045
Score = 37 (18.1 bits), Expect = 7.2e-75, Sum P(3) = 7.2e-75
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 185 DPSVIEKEEMEKIGKV 200
DPS+++ EE + G V
Sbjct: 6 DPSLVDAEESMEEGSV 21
Score = 37 (18.1 bits), Expect = 5.2e-44, Sum P(3) = 5.2e-44
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 794 EILCSAVGHGISRELFQKRFNIFSAENVYQ 823
E+ A G I + Q+RF + V +
Sbjct: 1570 EVGAEATGSDIKAKFMQRRFKLIEQSLVIE 1599
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 528 (190.9 bits), Expect = 1.0e-74, Sum P(2) = 1.0e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 466 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 525
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 526 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 580
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 581 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 640
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 641 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 689
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 690 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 747
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 748 HLI-KPPEENERENGQEVL 765
Score = 322 (118.4 bits), Expect = 1.0e-74, Sum P(2) = 1.0e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 768 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 827
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 828 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 887
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 888 QKKQVN 893
Score = 37 (18.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 355 QYQIVERVIAVKTSKSTLGQT 375
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 526 (190.2 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 453 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 512
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 513 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 567
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 568 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWS 627
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 628 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 676
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 677 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 734
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 735 YLI-KPPEENERENGQEVL 752
Score = 322 (118.4 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 755 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 814
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 815 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 874
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 875 QKKQVN 880
Score = 37 (18.1 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 994 LIGFARTSENIGPRKPGGP 1012
LI + T N+ P+KP P
Sbjct: 1564 LISQSHTPHNLHPQKPHLP 1582
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 783 (280.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 609 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 668
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 669 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 722
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 723 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 782
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 783 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 842
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 895
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 896 VINILMQLRKVCNHPNLFD 914
Score = 47 (21.6 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 783 (280.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 152/319 (47%), Positives = 212/319 (66%)
Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
T+ V+TP L +G L+EYQ GL WLV YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 609 TTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLAC 668
Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
EK WGP L++ P SV+ NW E+ R+CP K L Y+G +ER + R+ + +
Sbjct: 669 EKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKPN 722
Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
FH+ ITSY+L++ D + FRR W+Y++LDEAQ IK+ S RW++LL+FN + RLLLTGT
Sbjct: 723 AFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGT 782
Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
P+QN++ ELW+L+HF+MP +F SH +F EWFS + E NE + RLH +L+PF
Sbjct: 783 PLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPF 842
Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
+LRRVK DV ++ K E ++ C+LS RQ+ Y + + + GH ++
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETL--ATGHF-----MS 895
Query: 722 LMNIVIQLRKVCNHPELFE 740
++NI++QLRKVCNHP LF+
Sbjct: 896 VINILMQLRKVCNHPNLFD 914
Score = 47 (21.6 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 305 LNFLIQQTELYSHFMQNKSSSQP 327
L+F++ QTE YS + ++S +QP
Sbjct: 233 LDFIVGQTEKYSDLL-SQSLNQP 254
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 526 (190.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 598
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 599 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 658
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 659 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 707
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 708 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 765
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 766 YLI-KPPEENERENGQEIL 783
Score = 322 (118.4 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 905
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 906 QKKQVN 911
Score = 42 (19.8 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 994 LIGFARTSENIGPRKPGGP 1012
LI + TS N+ P+KP P
Sbjct: 1591 LISQSHTSHNLHPQKPHLP 1609
Score = 37 (18.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 376 QYQIVERVIAVKTSKSTLGQT 396
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 526 (190.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 487 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 546
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 547 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 601
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 602 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWS 661
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 662 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 710
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 711 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 768
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 769 YLI-KPPEENERENGQEVL 786
Score = 322 (118.4 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 789 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 848
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 849 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 908
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 909 QKKQVN 914
Score = 37 (18.1 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 994 LIGFARTSENIGPRKPGGP 1012
LI + T N+ P+KP P
Sbjct: 1595 LISQSHTPHNLHPQKPHLP 1613
Score = 37 (18.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 376 QYQIVERVIAVKTSKSTLGQT 396
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 526 (190.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 545
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 546 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 600
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 601 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 660
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 661 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 709
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 710 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 767
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 768 YLI-KPPEENERENGQEIL 785
Score = 322 (118.4 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 788 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 908 QKKQVN 913
Score = 37 (18.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 375 QYQIVERVIAVKTSKSTLGQT 395
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 526 (190.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 122/319 (38%), Positives = 187/319 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 497 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 556
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 557 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 611
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 612 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWS 671
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 672 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 720
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQL 729
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 721 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNHC 778
Query: 730 RKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 779 YLI-KPPEENERENGQEVL 796
Score = 322 (118.4 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 799 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 858
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 859 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 918
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 919 QKKQVN 924
Score = 37 (18.1 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 994 LIGFARTSENIGPRKPGGP 1012
LI + T N+ P+KP P
Sbjct: 1604 LISQSHTPHNLHPQKPHLP 1622
Score = 37 (18.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 389 QYQIVERVIAVKTSKSTLGQT 409
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 523 (189.2 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 113/285 (39%), Positives = 177/285 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL G+ WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPF+VV P S
Sbjct: 489 LRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLS 548
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W E + PD+ + Y G + R +R INP+ + F+ L+T+Y++L+
Sbjct: 549 TLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQT---KRIKFNALLTTYEILL 605
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 606 KDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLL 665
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHG-GTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
HF+M F+S E F + EHG G N +Q LH +L+PF+LRRVKKDV
Sbjct: 666 HFLMSDKFESWEDFED----------EHGKGRDNGYQ--SLHKVLEPFLLRRVKKDVEKS 713
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLN 715
L K E ++ +S++Q+ FY+ I +N +L+ G +S G LN
Sbjct: 714 LPAKVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLN 758
Score = 324 (119.1 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 67/126 (53%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ GKL LD LL RL+ +RVL+F+QM +ML+IL DY++ ++Y++ RLDGS
Sbjct: 791 LVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGEL 850
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 851 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 910
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 911 QKKQVN 916
Score = 163 (62.4 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 43/119 (36%), Positives = 67/119 (56%)
Query: 626 EQFNEWFSKGIESHAEHG-GTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHC 684
++F W + E EHG G N +Q LH +L+PF+LRRVKKDV L K E ++
Sbjct: 671 DKFESW--EDFED--EHGKGRDNGYQ--SLHKVLEPFLLRRVKKDVEKSLPAKVEQILRV 724
Query: 685 KLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
+S++Q+ FY+ I + + L +RG + +NIV++L+K CNH L ++ E
Sbjct: 725 DMSAQQKQFYKWILTR-NFKALSKGTRGSSS-----GFLNIVMELKKCCNHAFLIKQPE 777
Score = 43 (20.2 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 625 HEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEV---M 681
H + N + ESH+E G N + ++ A +K +R KKD ++++ E +
Sbjct: 52 HSESNS--TSDSESHSESGSESNGSKSHQSSAQVKDKPVR--KKDNLADVKKMWEEHPDV 107
Query: 682 VHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK 718
+ SSR + + + I G D S G +++K
Sbjct: 108 YGVRRSSRSRQ--EPARLNIGAEGSSD-SEGESSKRK 141
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 525 (189.9 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 123/320 (38%), Positives = 188/320 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFL+V P S
Sbjct: 491 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 550
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y++
Sbjct: 551 TLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYEI 605
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 606 LLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 665
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 666 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 714
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLN-EKKILNLMNIVIQ 728
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ N
Sbjct: 715 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL 774
Query: 729 LRKVCNHPELFERNEGSSYL 748
+R PE ER G L
Sbjct: 775 IRA----PEDSERETGQEVL 790
Score = 322 (118.4 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 793 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 852
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 853 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 912
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 913 QKKQVN 918
Score = 159 (61.0 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 44/133 (33%), Positives = 67/133 (50%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F W E E G E+ LH +L+PF+LRRVKKDV L K E ++ +
Sbjct: 673 EKFEFW-----EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE 727
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L +RG + +NIV++L+K CNH L E S
Sbjct: 728 MSALQKQYYKWILTR-NYKALAKGTRGSTS-----GFLNIVMELKKCCNHCYLIRAPEDS 781
Query: 746 SYLYFGEIPNSLL 758
E+ SL+
Sbjct: 782 ERETGQEVLQSLI 794
Score = 37 (18.1 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 994 LIGFARTSENIGPRKPGGP 1012
LI + S N+ P+KP P
Sbjct: 1598 LISQSHASHNLHPQKPHLP 1616
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 566 QYMVLDEAQAIKSSNSIRWKT 586
QY +++ A+K+S S +T
Sbjct: 383 QYQIVERVIAVKTSKSALGQT 403
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 511 (184.9 bits), Expect = 2.5e-74, Sum P(3) = 2.5e-74
Identities = 115/314 (36%), Positives = 181/314 (57%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G L+++QL G+ W+ + + NGILADEMGLGKT+Q +AFL++LA GPFLVV P
Sbjct: 373 GELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVP 432
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY---RRDAGFHILITSYQ 551
S + W + ++ + D+ + Y G R V+R Y + F++L+T+Y+
Sbjct: 433 LSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDY----EFYVDGTQKIKFNLLLTTYE 488
Query: 552 LLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELW 611
++ D +KWQYM +DEA +K+S S ++ L F NRLL+TGTP+QNN+ EL
Sbjct: 489 YVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELA 548
Query: 612 ALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
AL+ F+MP F+ E+ N +E+ E E + L L+P++LRR+KKDV
Sbjct: 549 ALVDFLMPGKFEIREEIN------LEAPDEE----QEAYIRSLQEHLQPYILRRLKKDVE 598
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRK 731
L +K+E ++ +LS Q +Y+ I + + L + ++ ++L+NIV++L+K
Sbjct: 599 KSLPSKSERILRVELSDLQMYWYKNILTR-NYRVLTQS----ISSGSQISLLNIVVELKK 653
Query: 732 VCNHPELFERNEGS 745
NHP LF+ E S
Sbjct: 654 ASNHPYLFDGVEES 667
Score = 344 (126.2 bits), Expect = 2.5e-74, Sum P(3) = 2.5e-74
Identities = 72/125 (57%), Positives = 88/125 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +SGK+ LD LL RLR + HRVL+F+QM +ML+IL DY++ R Y + RLDG+
Sbjct: 685 LIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAV 744
Query: 1111 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + F S FVFLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+G
Sbjct: 745 RRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 804
Query: 1170 QTKDV 1174
Q V
Sbjct: 805 QKNHV 809
Score = 38 (18.4 bits), Expect = 2.5e-74, Sum P(3) = 2.5e-74
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 309 IQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
I TE+ + + +S+ PS GN +P
Sbjct: 329 IAATEIQAFQEREESALSPSRGTNYGNSRP 358
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 496 (179.7 bits), Expect = 2.6e-74, Sum P(2) = 2.6e-74
Identities = 105/266 (39%), Positives = 165/266 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL+G+ WL C+ IL DEMGLGKT Q +A +LA N GPFL++ P S
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ RF P L + Y G +R L++++ ++++ FH+L+T+Y++ + D
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL------KQESRFHVLLTTYEICLKD 161
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ +S+ KTL F+ LLLTGTPIQN++ EL++LL F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 617 IMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
+ P LF S EQ ++ + IE +E + L+ +L+PF+LRRVK +V +EL
Sbjct: 222 VEPDLF-SKEQVEDFVQRYQDIEKESESA--------SELYKLLQPFLLRRVKAEVATEL 272
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNK 700
KTEV+++ +S+ Q+ +Y+AI K
Sbjct: 273 PRKTEVVIYHGMSALQKKYYKAILMK 298
Score = 338 (124.0 bits), Expect = 2.6e-74, Sum P(2) = 2.6e-74
Identities = 72/124 (58%), Positives = 93/124 (75%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL L ++ HRVLLF+QMT+ML+IL+DY++YR Y Y R+DGS +
Sbjct: 344 LIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEE 403
Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
R +++F + IF FL STRAGG+G+NLTAADTVIF++SD+NP DLQA RAHR+GQ
Sbjct: 404 RHLAIKNFGQQP-IFTFL-STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQ 461
Query: 1171 TKDV 1174
K V
Sbjct: 462 NKSV 465
Score = 337 (123.7 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 78/205 (38%), Positives = 127/205 (61%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
++++ FH+L+T+Y++ + D + + W +V+DEA +K+ +S+ KTL F+ LL
Sbjct: 143 KQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLL 202
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLH 655
LTGTPIQN++ EL++LL F+ P LF S EQ ++ + IE +E + L+
Sbjct: 203 LTGTPIQNSLQELYSLLSFVEPDLF-SKEQVEDFVQRYQDIEKESESA--------SELY 253
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRRVK +V +EL KTEV+++ +S+ Q+ +Y+AI K A F+N
Sbjct: 254 KLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDA--FENEMA--- 308
Query: 716 EKKILNLMNIVIQLRKVCNHPELFE 740
KK+ L N++ QLRK +HP LF+
Sbjct: 309 -KKV-KLQNVLSQLRKCVDHPYLFD 331
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 523 (189.2 bits), Expect = 3.0e-74, Sum P(2) = 3.0e-74
Identities = 123/320 (38%), Positives = 186/320 (58%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
L++YQL+GL WL + + N ILADEMGLGKTIQ ++FL++L + ++GPFL+V P
Sbjct: 472 LRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 531
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQ 551
S L +W E + P++ + Y G L R +R+ + KRL F+ LIT+Y+
Sbjct: 532 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK-----FNALITTYE 586
Query: 552 LLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELW 611
+L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW
Sbjct: 587 ILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELW 646
Query: 612 ALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVI 671
+LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 647 SLLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVE 695
Query: 672 SELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLNEKKILNLMNIVIQ 728
L K E ++ ++S+ Q+ +Y+ I +N +LA G ++ G LN ++ L
Sbjct: 696 KSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNI--VMELKKCCNH 753
Query: 729 LRKVCNHPELFERNEGSSYL 748
+ PE ER G L
Sbjct: 754 CYLI-KPPEENERENGQEIL 772
Score = 322 (118.4 bits), Expect = 3.0e-74, Sum P(2) = 3.0e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 775 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 834
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 835 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 894
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 895 QKKQVN 900
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 524 (189.5 bits), Expect = 3.1e-74, Sum P(2) = 3.1e-74
Identities = 115/286 (40%), Positives = 178/286 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL WL + + + + ILADEMGLGKTIQ ++FL++L + ++GPFLVV P S
Sbjct: 486 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPLS 545
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----NINPKRLYRRDAGFHILITSYQL 552
L +W E + P++ + Y G L R ++R+ + KRL F+ LIT+Y++
Sbjct: 546 TLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLK-----FNALITTYEI 600
Query: 553 LVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 612
L+ D+ + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+
Sbjct: 601 LLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 660
Query: 613 LLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
LLHFIMP F+ E F E KG E N +Q LH +L+PF+LRRVKKDV
Sbjct: 661 LLHFIMPEKFEFWEDFEEDHGKGRE---------NGYQ--SLHKVLEPFLLRRVKKDVEK 709
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLN 715
L K E ++ ++S+ Q+ +Y+ I +N +L+ G ++ G LN
Sbjct: 710 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLN 755
Score = 321 (118.1 bits), Expect = 3.1e-74, Sum P(2) = 3.1e-74
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ + Y + RLDGS
Sbjct: 788 LIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 847
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 848 RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 907
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 908 QKKQVN 913
Score = 155 (59.6 bits), Expect = 9.1e-35, Sum P(2) = 9.1e-35
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F W E E G E+ LH +L+PF+LRRVKKDV L K E ++ +
Sbjct: 668 EKFEFW-----EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE 722
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNH------PELF 739
+S+ Q+ +Y+ I + + L +RG + +NIV++L+K CNH PE
Sbjct: 723 MSALQKQYYKWILTR-NYKALSKGTRGSTS-----GFLNIVMELKKCCNHCYLIKPPEEN 776
Query: 740 ERNEG 744
ER G
Sbjct: 777 ERENG 781
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 511 (184.9 bits), Expect = 3.3e-74, Sum P(2) = 3.3e-74
Identities = 106/264 (40%), Positives = 164/264 (62%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL+G+ WL C+ IL DEMGLGKT Q +A +LA N GPFL++ P S
Sbjct: 48 LRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ RF P L + Y G +ER L++++ ++++ FH+L+T+Y++ + D
Sbjct: 108 VLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDL------KQESRFHVLLTTYEICLKD 161
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ NS+ KTLL F+ LLLTGTPIQN++ EL++LL F
Sbjct: 162 SSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 617 IMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTT 676
+ P LF EQ ++ + + E + LH +L+PF+LRRVK +V +EL
Sbjct: 222 VEPDLFPK-EQVGDFVQRYQDIEKESDSA------SELHKLLQPFLLRRVKAEVATELPK 274
Query: 677 KTEVMVHCKLSSRQQAFYQAIKNK 700
KTEV+++ +S+ Q+ +Y+AI K
Sbjct: 275 KTEVVLYHGMSALQKKYYKAILMK 298
Score = 346 (126.9 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 85/233 (36%), Positives = 136/233 (58%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
++++ FH+L+T+Y++ + D + + W +V+DEA +K+ NS+ KTLL F+ LL
Sbjct: 143 KQESRFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLL 202
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAI 657
LTGTPIQN++ EL++LL F+ P LF EQ ++ + + E + LH +
Sbjct: 203 LTGTPIQNSLQELYSLLSFVEPDLFPK-EQVGDFVQRYQDIEKESDSA------SELHKL 255
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
L+PF+LRRVK +V +EL KTEV+++ +S+ Q+ +Y+AI K A F++ K
Sbjct: 256 LQPFLLRRVKAEVATELPKKTEVVLYHGMSALQKKYYKAILMKDLDA--FESEMA----K 309
Query: 718 KILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISF 770
K+ L N++ QLRK +HP LFE G + +F + P EL +SF
Sbjct: 310 KV-KLQNVLSQLRKCVDHPYLFE---GETVPFFLTLLFMTTPLKNLELAALSF 358
Score = 321 (118.1 bits), Expect = 3.3e-74, Sum P(2) = 3.3e-74
Identities = 65/105 (61%), Positives = 82/105 (78%)
Query: 1070 AENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLL 1129
A HRVLLF+QMT+ML+IL+DYM+YR Y Y R+DGS +R +++F + +FVFLL
Sbjct: 362 ARGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-VFVFLL 420
Query: 1130 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
STRAGG+G+NLTAADTVIF +SD+NP DLQA RAHR+GQ K V
Sbjct: 421 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSV 465
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 522 (188.8 bits), Expect = 1.8e-73, Sum P(2) = 1.8e-73
Identities = 134/389 (34%), Positives = 218/389 (56%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 425 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 482
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 483 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 541
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 542 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 601
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 602 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 651
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 652 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 706
Query: 728 QLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV-- 785
+LRK CNHP L E F E + ++P F + +G I+ +PK+
Sbjct: 707 ELRKCCNHPYLINGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 765
Query: 786 -HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 766 GHKVLIFSQMVRCLDI---LEDYLIQRRY 791
Score = 319 (117.4 bits), Expect = 1.8e-73, Sum P(2) = 1.8e-73
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 745 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 804
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 805 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 864
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 865 QSKAV 869
Score = 42 (19.8 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
R +T+ R T G YDP D + H +R + +L
Sbjct: 1418 REQTDFYRVVSTFGVEYDP--DTMQFHWDRFRTFARL 1452
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 524 (189.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 534
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 535 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 591
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 592 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 651
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 652 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 700
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 701 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 746
Score = 313 (115.2 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 777 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 836
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR G
Sbjct: 837 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHG 896
Query: 1170 QTKDVS 1175
V+
Sbjct: 897 YLSQVN 902
Score = 149 (57.5 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 657 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 711
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 712 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 765
Query: 746 SY 747
+
Sbjct: 766 EF 767
Score = 37 (18.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1288 DKKPQAKQLQTRADYLIKLLS 1308
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 524 (189.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 534
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 535 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 591
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 592 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 651
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 652 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 700
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 701 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 746
Score = 313 (115.2 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 777 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 836
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR G
Sbjct: 837 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHG 896
Query: 1170 QTKDVS 1175
V+
Sbjct: 897 YLSQVN 902
Score = 149 (57.5 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 657 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 711
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 712 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 765
Query: 746 SY 747
+
Sbjct: 766 EF 767
Score = 37 (18.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1288 DKKPQAKQLQTRADYLIKLLS 1308
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 524 (189.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 113/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 476 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 535
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 536 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 592
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 593 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 652
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 653 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 701
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 702 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 747
Score = 313 (115.2 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 778 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 837
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR G
Sbjct: 838 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRHG 897
Query: 1170 QTKDVS 1175
V+
Sbjct: 898 YLSQVN 903
Score = 149 (57.5 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 658 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 712
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 713 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDNN 766
Query: 746 SY 747
+
Sbjct: 767 EF 768
Score = 37 (18.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1110 DRRDMVRDFQHRSDIFVFLLS 1130
D++ + Q R+D + LLS
Sbjct: 1289 DKKPQAKQLQTRADYLIKLLS 1309
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 522 (188.8 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 134/389 (34%), Positives = 218/389 (56%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 808 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 865
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 866 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 924
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 925 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 984
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 985 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 1034
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 1035 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 1089
Query: 728 QLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV-- 785
+LRK CNHP L E F E + ++P F + +G I+ +PK+
Sbjct: 1090 ELRKCCNHPYLINGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 786 -HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 1149 GHKVLIFSQMVRCLDI---LEDYLIQRRY 1174
Score = 319 (117.4 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 1128 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1187
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 1188 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1247
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 1248 QSKAV 1252
Score = 42 (19.8 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
R +T+ R T G YDP D + H +R + +L
Sbjct: 1801 REQTDFYRVVSTFGVEYDP--DTMQFHWDRFRTFARL 1835
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 517 (187.1 bits), Expect = 9.4e-73, Sum P(2) = 9.4e-73
Identities = 134/390 (34%), Positives = 218/390 (55%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 761 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 818
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 819 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 877
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 878 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 937
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 938 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 987
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 988 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 1042
Query: 728 QLRKVCNHPELFERNEGSSYLY-FGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV- 785
+LRK CNHP L L F E + ++P F + +G I+ +PK+
Sbjct: 1043 ELRKCCNHPYLINAGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1101
Query: 786 --HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 1102 GGHKVLIFSQMVRCLDI---LEDYLIQRRY 1128
Score = 319 (117.4 bits), Expect = 9.4e-73, Sum P(2) = 9.4e-73
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 1082 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1141
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 1142 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1201
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 1202 QSKAV 1206
Score = 42 (19.8 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
R +T+ R T G YDP D + H +R + +L
Sbjct: 1755 REQTDFYRVVSTFGVEYDP--DTMQFHWDRFRTFARL 1789
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 517 (187.1 bits), Expect = 9.7e-73, Sum P(2) = 9.7e-73
Identities = 134/390 (34%), Positives = 218/390 (55%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 808 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 865
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 866 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 924
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 925 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 984
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 985 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 1034
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 1035 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 1089
Query: 728 QLRKVCNHPELFERNEGSSYLY-FGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV- 785
+LRK CNHP L L F E + ++P F + +G I+ +PK+
Sbjct: 1090 ELRKCCNHPYLINAGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 786 --HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 1149 GGHKVLIFSQMVRCLDI---LEDYLIQRRY 1175
Score = 319 (117.4 bits), Expect = 9.7e-73, Sum P(2) = 9.7e-73
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 1129 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1188
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 1189 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1248
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 1249 QSKAV 1253
Score = 42 (19.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
R +T+ R T G YDP D + H +R + +L
Sbjct: 1802 REQTDFYRVVSTFGVEYDP--DTMQFHWDRFRTFARL 1836
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 517 (187.1 bits), Expect = 9.9e-73, Sum P(2) = 9.9e-73
Identities = 134/390 (34%), Positives = 218/390 (55%)
Query: 434 KGSLKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVV 492
+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++AFL + I GPFLV+
Sbjct: 808 RNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVI 865
Query: 493 APASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-NINPK----RLYRRDAGFHILI 547
AP S + NW E + + ++ T+ Y G L R ++++ + K RL F LI
Sbjct: 866 APLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALI 924
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
T+++++++D R ++W+ +++DEA +K+ N +L + +++LLTGTP+QN +
Sbjct: 925 TTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTV 984
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
EL++LLHF+ P+ F S +F + F G E Q+ +L AILKP MLRR+K
Sbjct: 985 EELFSLLHFLEPSQFPSESEFLKDF----------GDLKTEEQVQKLQAILKPMMLRRLK 1034
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
+DV L K E ++ +L++ Q+ +Y+AI K + + L GH N + NL+N ++
Sbjct: 1035 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEK-NFSFL-SKGAGHTN---MPNLLNTMM 1089
Query: 728 QLRKVCNHPELFERNEGSSYLY-FGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV- 785
+LRK CNHP L L F E + ++P F + +G I+ +PK+
Sbjct: 1090 ELRKCCNHPYLINAGAEEKILTEFREACH-IIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 786 --HQEILQSSEILCSAVGHGISRELFQKRF 813
H+ ++ S + C + + L Q+R+
Sbjct: 1149 GGHKVLIFSQMVRCLDI---LEDYLIQRRY 1175
Score = 319 (117.4 bits), Expect = 9.9e-73, Sum P(2) = 9.9e-73
Identities = 67/125 (53%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A H+VL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 1129 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 1188
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 1189 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1248
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 1249 QSKAV 1253
Score = 42 (19.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 916 RSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
R +T+ R T G YDP D + H +R + +L
Sbjct: 1804 REQTDFYRVVSTFGVEYDP--DTMQFHWDRFRTFARL 1838
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 490 (177.5 bits), Expect = 2.0e-72, Sum P(2) = 2.0e-72
Identities = 125/338 (36%), Positives = 191/338 (56%)
Query: 428 QTPELF-KGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
Q+P+ F KG+ L+ YQL+GL WL C+ + N IL DEMGLGKT+Q+++ L L + I
Sbjct: 498 QSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGI 557
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG--- 542
GPFLVVAP + + +W E + D+ L Y R + R N L +D G
Sbjct: 558 RGPFLVVAPLTTIPHWKREFENWT-DMNALVYHDSGAGRPICR-NYE-FYLKDKDGGGGG 614
Query: 543 -----------FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFN 591
F++LIT+Y++ + D + R+ W+Y+V+DEA +K+ + L S++
Sbjct: 615 ASGGASGKITKFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYS 674
Query: 592 CRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL 651
+ LLLTGTP+QNN ELW+LL+F+ P F + +QF E+G Q+
Sbjct: 675 FDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFL----------LEYGDLKESSQV 724
Query: 652 NRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR 711
L AILKP++LRR+K+ V + K E +V +L++ Q+ +Y+AI K + + F
Sbjct: 725 ESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEK-NFS--FLRKG 781
Query: 712 GHLNEKKILNLMNIVIQLRKVCNHPEL---FERNEGSS 746
G N+ +L+NI+++LRK CNHP L E++E SS
Sbjct: 782 GKSNQGP--SLLNIMMELRKCCNHPYLTKGVEQSETSS 817
Score = 343 (125.8 bits), Expect = 2.0e-72, Sum P(2) = 2.0e-72
Identities = 71/126 (56%), Positives = 90/126 (71%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
KL+ SGKL +D LL +L+ NH+VL+F+QM +L+IL+DY+ YR Y + R+DGS
Sbjct: 827 KLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGN 886
Query: 1110 DRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1168
DR+ + F SD FVFLL TRAGG+GINLTAADTVI ++SDWNP DLQA R HR+
Sbjct: 887 DRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRI 946
Query: 1169 GQTKDV 1174
GQ K V
Sbjct: 947 GQDKMV 952
Score = 42 (19.8 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 925 KFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFT 978
K T P + + + + +N K +N T + + +A IN+ S+ F+
Sbjct: 1976 KSTKSKNRPPSSPMKSNRNQNVNNNHKNINNTNGIVVEKKASLINILHSEEEFS 2029
Score = 39 (18.8 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 123 KFSLKVSDTGNSSIPEGAAGSIQR 146
+F LK D G GA+G I +
Sbjct: 602 EFYLKDKDGGGGGASGGASGKITK 625
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 560 (202.2 bits), Expect = 3.1e-72, Sum P(3) = 3.1e-72
Identities = 115/296 (38%), Positives = 177/296 (59%)
Query: 404 DVS-VAGSGNIDLHNPSTMP-VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILA 461
D++ VA + ++ L S +TS P L GSL+EYQ G++WL + + + LNGILA
Sbjct: 1026 DIAEVAAATDLILPKGSARTTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILA 1085
Query: 462 DEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGL 521
DE GLGKT+Q +A+ AHLA + IWGP LVV L NW E R+CP LK L Y G
Sbjct: 1086 DETGLGKTVQTVAYFAHLACNQGIWGPHLVVVRTCKLLNWEMEFKRWCPGLKILLYLGSR 1145
Query: 522 QERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
++R R + FH+ +TSY+LL+ D+ +F R +W+++VLDE Q IK+
Sbjct: 1146 RQRRYKRSR------WCEPNNFHVCVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMTE 1199
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
W+T+ + + R+LL TP+QN + ELW ++HF++P + +H N G + + +
Sbjct: 1200 KHWETIFNIKSQQRILLINTPLQNTLKELWTMIHFLLPGI--THPYLNFPIKPGTDQNQD 1257
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
+ L + RLH +++PF+LRR K+DV ++ K E ++ C+LS RQ++ Y+ I
Sbjct: 1258 YCHKL----VIRLHRMIQPFILRRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDI 1309
Score = 361 (132.1 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 71/207 (34%), Positives = 127/207 (61%)
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
FH+ +TSY+LL+ D+ +F R +W+++VLDE Q IK+ W+T+ + + R+LL TP
Sbjct: 1161 FHVCVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLINTP 1220
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFM 662
+QN + ELW ++HF++P + +H N G + + ++ L + RLH +++PF+
Sbjct: 1221 LQNTLKELWTMIHFLLPGI--THPYLNFPIKPGTDQNQDYCHKL----VIRLHRMIQPFI 1274
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNL 722
LRR K+DV ++ K E ++ C+LS RQ++ Y+ I + S GH + +
Sbjct: 1275 LRRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDILIQPSAQEALKT--GHF-----VRV 1327
Query: 723 MNIVIQLRKVCNHPELFE-RNEGSSYL 748
+ +++QL+K+CNHP+L + R+ +SY+
Sbjct: 1328 LEVLMQLQKICNHPDLIQPRDTHNSYV 1354
Score = 288 (106.4 bits), Expect = 3.1e-72, Sum P(3) = 3.1e-72
Identities = 56/139 (40%), Positives = 95/139 (68%)
Query: 1039 SCPPMQSFDPAKLLT-DS-GKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRK 1096
+CPP+ SF A +L DS GKL+ L ILL++L AEN RVL+F QM ML+ILE ++++R
Sbjct: 1850 ACPPVASFPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRH 1909
Query: 1097 YRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRA-GGLGINLTAADTVIFYESDWNP 1155
Y+RLD S ++ +R++ V+ + IF +L+ R +G ++ ADT++FY++D NP
Sbjct: 1910 LTYVRLDESLSLEERQEQVKKYNRNRQIFCTILTNRCCSAMG-HVFDADTIVFYDTDLNP 1968
Query: 1156 TLDLQAMDRAHRLGQTKDV 1174
++D++ + ++G++KD+
Sbjct: 1969 SMDMRTQEWCDKIGRSKDI 1987
Score = 54 (24.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 816 FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFME 865
FS + +Q+ +ASGS ++PV E F M + +A AK S ME
Sbjct: 443 FSTQQQFQTHAGVASGSISNPVDMEAFKRQQAMAQAVC-MADQAKRSRME 491
Score = 46 (21.3 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 1009 PGGP-HQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAK 1050
PG P QL+ +P P Q T QI G Q +DP+K
Sbjct: 510 PGVPLQQLMPTAQGGMP---PTPQ-TVQIGGQKQNQQQYDPSK 548
Score = 43 (20.2 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 780 KIPKIVHQEILQSSEILCS 798
KIP+IV Q+I+ S + + S
Sbjct: 2976 KIPQIVQQQIVSSPQQVIS 2994
Score = 38 (18.4 bits), Expect = 3.1e-72, Sum P(3) = 3.1e-72
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 115 LVASNSPQKFSLKVSDTGNSSIPEGAAGSIQ 145
L A+N LK+S G SSI + + S Q
Sbjct: 713 LTATNGT--VGLKLSSLGQSSIGQNSQESSQ 741
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 462 (167.7 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 99/266 (37%), Positives = 160/266 (60%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L+ YQL G+ WLV CY+ IL DEMGLGKT Q ++ L +L ++ L++ P S
Sbjct: 46 LRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTNKERSLILCPLS 105
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVAD 556
VL+NW +E+ RF P L + Y G +ER L++N+ + + F +L+T+Y++ + D
Sbjct: 106 VLSNWKEELERFAPGLSFVTYVGNKEERYKLQQNL------KEQSHFRVLLTTYEICLKD 159
Query: 557 EKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF 616
+ + W +V+DEA +K+ NS+ ++TL LLLTGTPIQN++ EL++LL F
Sbjct: 160 AAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTGTPIQNSLQELYSLLSF 219
Query: 617 IMPTLFDSHE--QFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
I P +F + +F E++ + +E +E LH +L+PF+LRRVK +V ++L
Sbjct: 220 IEPDIFPRKQVKEFVEYY-QAVEKESEPA--------KELHNLLQPFLLRRVKSEVTADL 270
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNK 700
K EV+++ +S+ Q+ +Y+AI K
Sbjct: 271 PKKVEVVLYHGMSALQRKYYKAILTK 296
Score = 346 (126.9 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 78/140 (55%), Positives = 99/140 (70%)
Query: 1036 IFGSCPPMQSFDPAKLLTD-SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
+F P + F+ + + SGKL LD LL L HRVLLF+QMTK+L+IL+DYM+Y
Sbjct: 327 LFNGVEP-EPFEIGDHIVEASGKLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDY 385
Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
R Y Y RLDGS +R +++F + IFVFLLSTRAGG+G+NLTAADTVIF +SD+N
Sbjct: 386 RGYSYERLDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFTDSDFN 444
Query: 1155 PTLDLQAMDRAHRLGQTKDV 1174
P DLQA+ RAHR+GQ K V
Sbjct: 445 PQNDLQAIARAHRIGQHKPV 464
Score = 313 (115.2 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 73/204 (35%), Positives = 122/204 (59%)
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + F +L+T+Y++ + D + + W +V+DEA +K+ NS+ ++TL LL
Sbjct: 141 KEQSHFRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLL 200
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHE--QFNEWFSKGIESHAEHGGTLNEHQLNRLH 655
LTGTPIQN++ EL++LL FI P +F + +F E++ + +E +E LH
Sbjct: 201 LTGTPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYY-QAVEKESEPA--------KELH 251
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
+L+PF+LRRVK +V ++L K EV+++ +S+ Q+ +Y+AI K A F+ G
Sbjct: 252 NLLQPFLLRRVKSEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDLDA--FEGGTG--- 306
Query: 716 EKKILNLMNIVIQLRKVCNHPELF 739
+K++ L N++IQLRK HP LF
Sbjct: 307 -RKVM-LQNVLIQLRKCVAHPYLF 328
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 499 (180.7 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 116/331 (35%), Positives = 182/331 (54%)
Query: 423 VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
+T+ Q + G LK+YQ+ GL+WL+ ++ GLNGILADEMGLGKT+Q ++FL+HL E
Sbjct: 161 ITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIEN 220
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
I GPFLVV P S L+NW +EI +F P +K Y G QER N L ++
Sbjct: 221 -GINGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER-------NDIDLLQQQET 272
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
+I++TSY++ + D ++ W+Y+++DE +K+S + K L N NRLLLTGTP
Sbjct: 273 TNIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTP 332
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFS--KGIESHAEHGGTLNEHQ---LNRLHAI 657
+QNN+ ELW+LL+FI+P +F E F +WF+ + E E GT NE N +
Sbjct: 333 LQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLN 392
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
++ +++ + + + + + V L +++ K+ +D +N+K
Sbjct: 393 IQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDA----VNDK 448
Query: 718 KILNLMNIVIQLRKVCNHPELFERNEGSSYL 748
+L+ ++ NH ELF + YL
Sbjct: 449 LFDSLVETNLKAFIKFNHEELFNGFDVDEYL 479
Score = 305 (112.4 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 63/131 (48%), Positives = 86/131 (65%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY---LRLD 1103
D A+++ +S K Q L+ LL L + H+VL+FAQ TK+L++LED++ + RLD
Sbjct: 602 DQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLD 661
Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
GS+ R + + F + VFL STRAGGLGINL AADTVI ++DWNP +DLQA+D
Sbjct: 662 GSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAID 721
Query: 1164 RAHRLGQTKDV 1174
R HR+GQ V
Sbjct: 722 RVHRIGQINPV 732
Score = 64 (27.6 bits), Expect = 4.4e-24, Sum P(3) = 4.4e-24
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 697 IKNKISLAGLFDNS--RGHLNEKKILNLMNI-VIQLRKVCNHPELF 739
IK+K + + ++ + L E K L L N+ +IQLR +CN P ++
Sbjct: 550 IKSKTKIQSILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIY 595
Score = 43 (20.2 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 300 RQQQRLNFLIQQTELYSHFM 319
++ RLN LI+++++YS +
Sbjct: 55 KKMNRLNKLIEKSQIYSQII 74
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 499 (180.7 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 116/331 (35%), Positives = 182/331 (54%)
Query: 423 VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
+T+ Q + G LK+YQ+ GL+WL+ ++ GLNGILADEMGLGKT+Q ++FL+HL E
Sbjct: 161 ITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIEN 220
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
I GPFLVV P S L+NW +EI +F P +K Y G QER N L ++
Sbjct: 221 -GINGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER-------NDIDLLQQQET 272
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
+I++TSY++ + D ++ W+Y+++DE +K+S + K L N NRLLLTGTP
Sbjct: 273 TNIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTP 332
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFS--KGIESHAEHGGTLNEHQ---LNRLHAI 657
+QNN+ ELW+LL+FI+P +F E F +WF+ + E E GT NE N +
Sbjct: 333 LQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLN 392
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
++ +++ + + + + + V L +++ K+ +D +N+K
Sbjct: 393 IQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDA----VNDK 448
Query: 718 KILNLMNIVIQLRKVCNHPELFERNEGSSYL 748
+L+ ++ NH ELF + YL
Sbjct: 449 LFDSLVETNLKAFIKFNHEELFNGFDVDEYL 479
Score = 305 (112.4 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 63/131 (48%), Positives = 86/131 (65%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY---LRLD 1103
D A+++ +S K Q L+ LL L + H+VL+FAQ TK+L++LED++ + RLD
Sbjct: 602 DQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLD 661
Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
GS+ R + + F + VFL STRAGGLGINL AADTVI ++DWNP +DLQA+D
Sbjct: 662 GSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAID 721
Query: 1164 RAHRLGQTKDV 1174
R HR+GQ V
Sbjct: 722 RVHRIGQINPV 732
Score = 64 (27.6 bits), Expect = 4.4e-24, Sum P(3) = 4.4e-24
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 697 IKNKISLAGLFDNS--RGHLNEKKILNLMNI-VIQLRKVCNHPELF 739
IK+K + + ++ + L E K L L N+ +IQLR +CN P ++
Sbjct: 550 IKSKTKIQSILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIY 595
Score = 43 (20.2 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 300 RQQQRLNFLIQQTELYSHFM 319
++ RLN LI+++++YS +
Sbjct: 55 KKMNRLNKLIEKSQIYSQII 74
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 497 (180.0 bits), Expect = 3.9e-71, Sum P(3) = 3.9e-71
Identities = 122/340 (35%), Positives = 187/340 (55%)
Query: 428 QTPELFKG--SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
+TP ++KG SL+ YQL+GL WL + N ILADEMGLGKTIQ++ F+ H E I
Sbjct: 2019 KTP-VYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFV-HSVYEYGI 2076
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRD 540
GPFLV+AP S + NW E + D+ + Y G + + +++ ++ +
Sbjct: 2077 RGPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEP 2135
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
F++LIT+++++V D + W+ V+DEA +K+ N + L N +R+LL+G
Sbjct: 2136 IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSG 2195
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
TP+QNN++EL++LL+F+ P+ F S E+F +E G E ++N+L A+LKP
Sbjct: 2196 TPLQNNISELFSLLNFLEPSQFSSQEEFM----------SEFGSLRTEEEVNKLQALLKP 2245
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
MLRR+K DV L K E ++ +L++ Q+ +Y+ I L F + I
Sbjct: 2246 MMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGI-----LEQNFSFLKKGTTSANIP 2300
Query: 721 NLMNIVIQLRKVCNHPELFERNEGSSYLYF----GEIPNS 756
NLMN +++LRK C HP L E F GE P S
Sbjct: 2301 NLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPES 2340
Score = 346 (126.9 bits), Expect = 3.9e-71, Sum P(3) = 3.9e-71
Identities = 72/132 (54%), Positives = 93/132 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +GK+ +D LL +L+A HRVL+F+QM + L+ILEDY+ YRKY + R+DG
Sbjct: 2345 LILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNL 2404
Query: 1111 RRDMV-RDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R++ + R + SD FVFLL T+AGGLGINLTAADTVI Y+SDWNP DLQA R HR+G
Sbjct: 2405 RQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIG 2464
Query: 1170 QTKDVSSWLKLC 1181
Q K V + LC
Sbjct: 2465 QRKMVKIYRLLC 2476
Score = 44 (20.5 bits), Expect = 3.9e-71, Sum P(3) = 3.9e-71
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 101 PRPQYESLQARLKALVASNSPQKFSLK 127
P+ Q + QA+ V SN P + S++
Sbjct: 436 PQQQQQQTQAQQPQQVVSNQPSQHSIQ 462
Score = 41 (19.5 bits), Expect = 8.0e-71, Sum P(3) = 8.0e-71
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 92 PRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGNSS 135
P+ + +P L + L SN ++ +D+ NSS
Sbjct: 818 PQQQTQQQQPSTPSHHLSSILNETANSNDSSTLAVAANDSNNSS 861
Score = 41 (19.5 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1004 IGPRKPGGPHQLIQE 1018
+GPR P P Q Q+
Sbjct: 525 VGPRMPASPQQQQQQ 539
Score = 40 (19.1 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 893 ELNENHPDRGKVRAVTRLLLIPSRSETNLLRR 924
EL E+ D K+ R IP RSE +R
Sbjct: 1978 ELEED-VDNDKIEQYLRFNKIPQRSEWKSKKR 2008
Score = 38 (18.4 bits), Expect = 6.0e-39, Sum P(3) = 6.0e-39
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 737 ELFERNEGSSYLYFGEIPNSL-LPPPFGELEDI 768
E ER+E L ++ LPPP+ E +++
Sbjct: 5368 ERSERSESRISLTITNAADAAKLPPPYEEADEL 5400
Score = 38 (18.4 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 1004 IGPRKPGGPHQLIQEIDSELP 1024
+ P KP P Q Q+ ++ P
Sbjct: 428 VSPAKPPPPQQQQQQTQAQQP 448
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 791 QSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSD 833
+SS +L + H E ++ + N QS S A GSD
Sbjct: 1779 KSSTVLTA--DHAKEPETVLEKMEVDEKANDDQSAVSKAEGSD 1819
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 455 (165.2 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 113/314 (35%), Positives = 173/314 (55%)
Query: 416 HNPSTMPVTSTVQTPE-LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
H S P TP L G LKE+Q+KG+ ++ + + N +LADEMGLGKT+Q +A
Sbjct: 424 HPSSRKPFEPIKGTPSFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVA 483
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK----- 529
F++ L + GPF+VV P S + +WA+ + PDL + Y G R VL++
Sbjct: 484 FISWLRHVRRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMV 543
Query: 530 NINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS 589
+ NP+R F++L+T+Y+ ++ D + + WQ+M +DEA +K+ +S + L
Sbjct: 544 DGNPRR-----PKFNVLLTTYEYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQE 598
Query: 590 FNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEH 649
FN RLL+TGTPIQNN+AEL ALL F+ P L + + + S A
Sbjct: 599 FNSPARLLITGTPIQNNLAELSALLDFLNPGLVNVDADMD------LNSEAA------SE 646
Query: 650 QLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDN 709
+L L + PFMLRR K V S+L KTE ++ +LS Q +Y+ I K + A L +
Sbjct: 647 KLAELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTK-NYAALNEG 705
Query: 710 SRGHLNEKKILNLM 723
++G ++ +LN+M
Sbjct: 706 TKGQ--KQSLLNIM 717
Score = 369 (135.0 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 75/126 (59%), Positives = 90/126 (71%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+T SGK+ LD LL +L+ + HRVL+F+QM KML+IL DYM YR Y Y RLDG+
Sbjct: 751 LITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSAS 810
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + + S F F+LSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+G
Sbjct: 811 RRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIG 870
Query: 1170 QTKDVS 1175
QTK VS
Sbjct: 871 QTKPVS 876
Score = 138 (53.6 bits), Expect = 2.1e-37, Sum P(3) = 2.1e-37
Identities = 35/94 (37%), Positives = 56/94 (59%)
Query: 650 QLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDN 709
+L L + PFMLRR K V S+L KTE ++ +LS Q +Y+ I K + A L +
Sbjct: 647 KLAELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTK-NYAALNEG 705
Query: 710 SRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
++G +K+ +L+NI+++L+K NHP +F E
Sbjct: 706 TKG---QKQ--SLLNIMMELKKASNHPFMFPSAE 734
Score = 42 (19.8 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 2 ETTSDWLNDISPRRPTNYHETEFTPKVMYEPAYLDIGEGI 41
ETT N S RR NY KV+ E L+ EG+
Sbjct: 303 ETTESLANCRSTRRLDNY-----VRKVLAEDLRLNYDEGV 337
Score = 42 (19.8 bits), Expect = 8.7e-37, Sum P(3) = 8.7e-37
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1053 TDSGKLQTLDILLKRLRAENHRVLLFAQMTKML 1085
T K L+I+++ +A NH + + TK+L
Sbjct: 706 TKGQKQSLLNIMMELKKASNHPFMFPSAETKIL 738
Score = 41 (19.5 bits), Expect = 7.6e-71, Sum P(3) = 7.6e-71
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 185 DPSVIEKEEMEKIGKVWVNIVRKDIP 210
D S+ E + + WVN V D P
Sbjct: 235 DDSMFEDDADDLTPNYWVNTVEDDRP 260
Score = 37 (18.1 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 3 TTSDWLNDISPRRPTNYHETEFTPKVMYEPAYLDI 37
T + W+N + RP PK +P+ DI
Sbjct: 247 TPNYWVNTVEDDRPAIDIVLNHRPKPGVDPSDPDI 281
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 487 (176.5 bits), Expect = 1.1e-70, Sum P(3) = 1.1e-70
Identities = 104/282 (36%), Positives = 171/282 (60%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL+GL W+V + +G + ILADEMGLGKTIQ+++ LA L ++ GP+LVV P S
Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 464
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN---INPKRLYRRDAGFHILITSYQLL 553
+ W E +++ P++ + Y G + R ++R+ + + + +A ++T+Y++L
Sbjct: 465 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINA----ILTTYEIL 520
Query: 554 VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
+ D+ + + W +++DEA +K+ S+ +K+L F ++LL+TGTP+QN++ ELWAL
Sbjct: 521 LKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWAL 580
Query: 614 LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
LHFIMP FD E+F +H E N ++ LH L+PF+LRRVKKDV
Sbjct: 581 LHFIMPEKFDCWEEFET-------AHNES----NHKGISALHKKLEPFLLRRVKKDVEKS 629
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
L KTE ++ +++ Q+ FY+ I K + L +G +N
Sbjct: 630 LPPKTEQILRVDMTAHQKQFYKWILTK-NYRELSKGVKGSIN 670
Score = 335 (123.0 bits), Expect = 1.1e-70, Sum P(3) = 1.1e-70
Identities = 73/128 (57%), Positives = 89/128 (69%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
+LL SGKL LD LL RL+ + HRVL+F+QM ML+IL++Y+ R++ RLDGS
Sbjct: 705 QLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRA- 763
Query: 1110 DRRDMVRDFQHR--SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1167
D R D + S F FLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR
Sbjct: 764 DLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 823
Query: 1168 LGQTKDVS 1175
+GQTK V+
Sbjct: 824 IGQTKTVN 831
Score = 149 (57.5 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E H + N ++ LH L+PF+LRRVKKDV L KTE ++
Sbjct: 587 EKFDCWE----EFETAHNES-NHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVD 641
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPEL 738
+++ Q+ FY+ I K + L +G +N +N+V++L+K CNH L
Sbjct: 642 MTAHQKQFYKWILTK-NYRELSKGVKGSIN-----GFVNLVMELKKCCNHASL 688
Score = 39 (18.8 bits), Expect = 1.1e-70, Sum P(3) = 1.1e-70
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 320 QNKSSSQPSEVLPVGNDKPN 339
+N SSS+P E P + N
Sbjct: 63 ENSSSSEPDEPAPKKKNNNN 82
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 490 (177.5 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 109/305 (35%), Positives = 182/305 (59%)
Query: 422 PVTSTVQT-PE-LFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAH 478
P S ++ PE L G +L++YQ+ GL WL++ + + + ILADEMGLGKTIQ + FL
Sbjct: 510 PKFSRIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYS 569
Query: 479 LAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYR 538
L + +++GPFL V P S + W E + PD+ + Y G ++ R ++++ +
Sbjct: 570 LFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSK 629
Query: 539 RDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLL 598
R F+ ++T+Y++++ D+++ ++W +++DEA +K+ +S+ +K+L F+ +RLL+
Sbjct: 630 R-LKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLI 688
Query: 599 TGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAIL 658
TGTP+QN++ ELWALLHFIMP FD+ E F +HG + RLH L
Sbjct: 689 TGTPLQNSLKELWALLHFIMPDKFDTWENFE----------VQHGNA-EDKGYTRLHQQL 737
Query: 659 KPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK 718
+P++LRRVKKDV L K E ++ +++S Q+ +Y+ I K + L RG +
Sbjct: 738 EPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTK-NFDALRKGKRG--STST 794
Query: 719 ILNLM 723
LN++
Sbjct: 795 FLNIV 799
Score = 323 (118.8 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 70/126 (55%), Positives = 84/126 (66%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
LL SGKL LD LL RL+ HRVL+F+QM +ML++L DY+ R + + RLDGS
Sbjct: 831 LLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEM 890
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
RR + F S F FLLSTRAGGLGINL ADTVI ++SDWNP DLQA RAHR+G
Sbjct: 891 RRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIG 950
Query: 1170 QTKDVS 1175
Q V+
Sbjct: 951 QKNQVN 956
Score = 155 (59.6 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 40/118 (33%), Positives = 63/118 (53%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
++F+ W + E +HG + RLH L+P++LRRVKKDV L K E ++ +
Sbjct: 710 DKFDTW--ENFE--VQHGNA-EDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVE 764
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
++S Q+ +Y+ I K + L RG + +NIVI+L+K CNH L +E
Sbjct: 765 MTSLQKQYYKWILTK-NFDALRKGKRGSTS-----TFLNIVIELKKCCNHAALIRPSE 816
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 831 GSDASPVKSETFGFT 845
GS SP KS+ G T
Sbjct: 1612 GSSGSPAKSKPNGVT 1626
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 490 (177.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 124/326 (38%), Positives = 180/326 (55%)
Query: 433 FKGSLKEYQLKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 491
F+ LK YQL G+ +L+ Y++G+ G ILADEMGLGKTIQA+ +L L+ N GP LV
Sbjct: 209 FQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLV 268
Query: 492 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQ 551
V PASVL NW E+ ++CP L Y G R + +N + F++L+ Y
Sbjct: 269 VCPASVLENWERELRKWCPSFTVLQYHGAA--RAAYSRELNSLSKAGKPPPFNVLLVCYS 326
Query: 552 LLVA-------DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSF--NCRNRLLLTGTP 602
L D K +R +W +++DEA A+K NS RWK L+S N RL+LTGTP
Sbjct: 327 LFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 386
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFM 662
+QN++ ELW+LL F++P +F + N K + +AE + + R+ +IL PF+
Sbjct: 387 LQNDLHELWSLLEFMLPDIFTTE---NVDLKKLL--NAE-----DTELITRMKSILGPFI 436
Query: 663 LRRVKKDVISELTTKTEVMVHCKLSSRQQ-AFYQAIKN--KISLAGLFDNSRGHLNE-KK 718
LRR+K DV+ +L K + + + + +Q+ A+ +AI+ S A L S LN K
Sbjct: 437 LRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAK 496
Query: 719 IL---NLMNIVIQLRKVCNHPELFER 741
L + N Q RK+ NHP L R
Sbjct: 497 ALPKRQISNYFTQFRKIANHPLLIRR 522
Score = 299 (110.3 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 62/121 (51%), Positives = 82/121 (67%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
S K +TL LL ++ HRVL+F+Q T ML+ILE ++ Y RLDGS+ + DR+ +
Sbjct: 587 SAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTI 646
Query: 1115 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
V F + IF LLSTRAGG G+NLT ADTVI ++ D+NP +D QA DR HR+GQTK V
Sbjct: 647 VDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPV 706
Query: 1175 S 1175
+
Sbjct: 707 T 707
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 485 (175.8 bits), Expect = 3.9e-70, Sum P(2) = 3.9e-70
Identities = 119/343 (34%), Positives = 190/343 (55%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
++ E G+ L+EYQL+G+ WL+ N Y + N ILADEMGLGKTIQ++A L+ + +
Sbjct: 837 ESTEYKNGNQLREYQLEGVNWLLFNWYNRQ-NCILADEMGLGKTIQSIALLSEMFSA-GV 894
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
PF+++AP S + NW E S + D+ + Y G L R ++++ +Y +D H+
Sbjct: 895 QSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQY----EMYCKDDKGHL 949
Query: 546 ---------LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRL 596
LIT+++++++D R + W+ +V+DEA +K+ N +L +++
Sbjct: 950 IPGAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKV 1009
Query: 597 LLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHA 656
LLTGTP+QN + EL++LLHF+ P F S IE E G E Q+ +L +
Sbjct: 1010 LLTGTPLQNTVEELFSLLHFLEPAQFPSE----------IEFLREFGDLKTEEQVQKLQS 1059
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE 716
ILKP MLRR+K+DV L K E ++ +L+ Q+ +Y+AI + + + L S G
Sbjct: 1060 ILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILER-NFSFL---SMGATQN 1115
Query: 717 KKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLP 759
+ NL+N +++LRK CNHP L E E+ + L P
Sbjct: 1116 SNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAP 1158
Score = 327 (120.2 bits), Expect = 3.9e-70, Sum P(2) = 3.9e-70
Identities = 70/135 (51%), Positives = 90/135 (66%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F L+ +GKL LD LL RL+A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1155 PLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1214
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT + ++SDWNP DL
Sbjct: 1215 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDL 1274
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ+K V
Sbjct: 1275 QAQARCHRIGQSKAV 1289
Score = 42 (19.8 bits), Expect = 3.8e-40, Sum P(2) = 3.8e-40
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 757 LLPPPFGELEDISFSGVRN--PIEYKIPKIVHQEILQSSEILCSAVGHGISR 806
+LP P E E +S + + P + IPK H E+L +A HG+SR
Sbjct: 1954 VLPHPSLE-ERLSLAPQTSDLPSWWSIPKHDH-------ELLLAAARHGVSR 1997
Score = 38 (18.4 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 597 LLTGTPIQNNMA 608
+LTGTP++ MA
Sbjct: 187 VLTGTPLRPGMA 198
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 499 (180.7 bits), Expect = 5.0e-70, Sum P(3) = 5.0e-70
Identities = 136/394 (34%), Positives = 207/394 (52%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
+L+EYQL+G+ WL+ + N ILADEMGLGKTIQ++ FL + K I GPFLV+AP
Sbjct: 1011 ALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPL 1069
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA-G--------FHIL 546
S + NW E R +L + Y G RK I +Y RD G FH +
Sbjct: 1070 STIPNWEREF-RTWTELNVVVYHGS----QASRKTIQAYEMYYRDTQGRIIKGAYKFHAV 1124
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
IT++++++ D R V W+ +++DEA +K+ N + L + +++LLTGTP+QN
Sbjct: 1125 ITTFEMILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNT 1184
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRV 666
+ EL++LL+F+ P F S F + E G E Q+ +L ILKP MLRR+
Sbjct: 1185 VEELFSLLNFLEPDRFPSESTFMQ----------EFGDLKTEEQVQKLQGILKPMMLRRL 1234
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK----ISLAGLFDNSRGHLNEKKILNL 722
K+DV L K E ++ +L++ Q+ +Y+AI K +S +G S G + NL
Sbjct: 1235 KEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGG-GGSNVPNL 1293
Query: 723 MNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIP 782
+N +++LRK CNHP L E F E + L P F I +G I+ +P
Sbjct: 1294 LNTMMELRKCCNHPYLINGAEEKIMEEFRET-HPLDQPEFHLQAMIQAAGKLVLIDKLLP 1352
Query: 783 KIV---HQEILQSSEILCSAVGHGISRELFQKRF 813
K+ H+ ++ S + C + + L Q+R+
Sbjct: 1353 KLKAGGHRVLIFSQMVRCLDI---LEDYLIQRRY 1383
Score = 324 (119.1 bits), Expect = 5.0e-70, Sum P(3) = 5.0e-70
Identities = 68/125 (54%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ +GKL +D LL +L+A HRVL+F+QM + L+ILEDY+ R+Y Y R+DG
Sbjct: 1337 MIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNL 1396
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DLQA R HR+G
Sbjct: 1397 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1456
Query: 1170 QTKDV 1174
Q+K V
Sbjct: 1457 QSKSV 1461
Score = 45 (20.9 bits), Expect = 5.0e-70, Sum P(3) = 5.0e-70
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 58 LPSFSDIQVEEFYLK 72
L S +I+VEEFY+K
Sbjct: 859 LASGEEIEVEEFYVK 873
Score = 42 (19.8 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 827 SLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVF 886
S AS S A +ET + D+ P+ A F ER LF+ DR ++ + ++
Sbjct: 2393 SNASLSTARDETNETRDCFSVDDVEPS-----ASQMFSERSLFSFWPKDRVMINRMDNIC 2447
Query: 887 MEAMDGELNEN 897
M G+ N
Sbjct: 2448 EAVMKGKWPSN 2458
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 485 (175.8 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 116/313 (37%), Positives = 182/313 (58%)
Query: 437 LKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
L+EYQL+GL WL+ N Y + N ILADEMGLGKTIQ++ FL + I GPFL++AP
Sbjct: 386 LREYQLEGLNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPL 443
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRDAGFHILITSY 550
S + NW E R D+ + Y G L R ++++ + R+ R F +IT++
Sbjct: 444 STIANWEREF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTF 502
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
++++ ++W+ +++DEA +K+ N + L N +++LLTGTP+QN + EL
Sbjct: 503 EMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEEL 562
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
++LLHF+ P F S F + E G E Q+ +L AILKP MLRR+K+DV
Sbjct: 563 FSLLHFLEPLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV 612
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
+L K E ++ +L++ Q+ +Y+AI K + + L S+G + + NL+N +++LR
Sbjct: 613 EKKLAPKEETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVPNLVNTMMELR 667
Query: 731 KVCNHPELFERNE 743
K CNHP L + E
Sbjct: 668 KCCNHPYLIKGAE 680
Score = 322 (118.4 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 693 PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 752
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 753 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 812
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 813 QAQARCHRIGQNKAV 827
Score = 38 (18.4 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 256 TRKLARDMLLFWKRVD 271
TR+L R WK++D
Sbjct: 360 TRRLDRPPSNIWKKID 375
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 456 (165.6 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 103/326 (31%), Positives = 184/326 (56%)
Query: 427 VQTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
+Q P L +G +L +YQL G++WL+ Y + LN IL DEMGLGKTIQ +AFL++L +
Sbjct: 383 LQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKT 442
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
GP L+V P+S + NW E ++CP ++ L Y+G ER LR + ++ + +
Sbjct: 443 -GPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDH-----IDV 496
Query: 546 LITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
++T+Y ++ + D+K+F+ Y++ DE +K+ +S R++ L+ + ++LLTGTP
Sbjct: 497 ILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTP 556
Query: 603 IQNNMAELWALLHFIMPTLFDSH-EQFN---EWFSK-GIESHAEHGGTLNEHQLNRLHAI 657
+QNN+ EL +L++F++ +F+ + E + F + G ++ + ++ AI
Sbjct: 557 LQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAI 616
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
L+P++LRR+K V+ L +K+E ++ ++ Q+ Y I + + +S G L
Sbjct: 617 LQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYGSL--- 673
Query: 718 KILNLMNIVIQLRKVCNHPELFERNE 743
++LR+ NHP L R+E
Sbjct: 674 ---------MRLRQAANHP-LLRRSE 689
Score = 340 (124.7 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 64/125 (51%), Positives = 91/125 (72%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
+L SGK + LD++L ++ + +VL+F+Q T ML+ILE Y+N R Y Y RLDG + ++
Sbjct: 747 QLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVL 806
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
DR++M+ +F D+FVFLLSTRAGGLGINLT+A+ +I ++ D+NP D QA DR HR+G
Sbjct: 807 DRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMG 866
Query: 1170 QTKDV 1174
Q K V
Sbjct: 867 QEKPV 871
Score = 42 (19.8 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 525 MVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRW 584
M LR+ N L R + L ++L EK + KWQ++ D A + I+
Sbjct: 674 MRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWL----SDIKI 729
Query: 585 KTLLS-FNCRNRLLL 598
L F C ++ LL
Sbjct: 730 HQLCERFRCTSKFLL 744
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 552 (199.4 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 116/301 (38%), Positives = 184/301 (61%)
Query: 429 TPELFKGS-LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
+P KG L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q +A L +L +NI G
Sbjct: 174 SPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPG 233
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMV-LRKNINPKRLYRRDAGFHIL 546
P +V+ P S L NW +E R+ P L+ + + G R +R + P + +
Sbjct: 234 PHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE-------WDVC 286
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+QNN
Sbjct: 287 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 346
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFMLRR 665
+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+LRR
Sbjct: 347 LHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLLRR 398
Query: 666 VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNI 725
+K DV L K E+ V+ LS Q+ ++ + IS ++++ H + ILN++ +
Sbjct: 399 IKTDVEKSLPPKKEIKVYLGLSKMQREWFVILAFFIS-ENSNNSNKNH--KLDILNVIML 455
Query: 726 V 726
+
Sbjct: 456 L 456
Score = 342 (125.4 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 71/192 (36%), Positives = 117/192 (60%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++++ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 344
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELWALL+F++P +F+S + F+ WF + L + +L RLHA+LKPF+L
Sbjct: 345 NNLHELWALLNFLLPDVFNSADDFDSWF--------DTKNCLGDQKLVERLHAVLKPFLL 396
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR+K DV L K E+ V+ LS Q+ ++ + LA + + N+ L+++
Sbjct: 397 RRIKTDVEKSLPPKKEIKVYLGLSKMQREWF------VILAFFISENSNNSNKNHKLDIL 450
Query: 724 NIVIQLR--KVC 733
N+++ LR K C
Sbjct: 451 NVIMLLREAKCC 462
Score = 213 (80.0 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 1108 IMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
I+ +++ + F S F+F+LSTRAGGLGINL +AD VI Y+SDWNP +DLQAMDRAH
Sbjct: 555 IIYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 614
Query: 1167 RLGQTKDV 1174
R+GQ K V
Sbjct: 615 RIGQKKPV 622
Score = 73 (30.8 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 303 QRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
+R FL++QTEL++HF+Q + P+ L + +P
Sbjct: 93 KRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRP 128
Score = 38 (18.4 bits), Expect = 2.1e-51, Sum P(3) = 2.1e-51
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 798 PPRLFELLEKEILYYRKTIGYKVPR 822
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 487 (176.5 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 127/365 (34%), Positives = 202/365 (55%)
Query: 386 DTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGS-LKEYQLKG 444
D + +K+ E +A+ D ++D PS + Q+ E G+ L+EYQL+G
Sbjct: 814 DVDLAKIEEFEQLQASRPDTR-----HLD-RPPSNI-WKKIEQSREYKNGNQLREYQLEG 866
Query: 445 LQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 503
L WL+ N Y + N ILADEMGLGKTIQ++ FL + I GPFL++AP S + NW
Sbjct: 867 LNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWER 924
Query: 504 EISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRDAGFHILITSYQLLVADEK 558
E R D+ + Y G L R ++++ + R+ R F +IT++++++
Sbjct: 925 EF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCG 983
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
+ W+ +++DEA +K+ N + L N +++LLTGTP+QN + EL++LLHF+
Sbjct: 984 ELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1043
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P F S F + E G E Q+ +L AILKP MLRR+K+DV +L K
Sbjct: 1044 PLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE 1093
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPEL 738
E ++ +L++ Q+ +Y+AI K + + L S+G + + NL+N +++LRK CNHP L
Sbjct: 1094 ETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVPNLVNTMMELRKCCNHPYL 1148
Query: 739 FERNE 743
+ E
Sbjct: 1149 IKGAE 1153
Score = 322 (118.4 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1166 PSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1225
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 1226 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1285
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 1286 QAQARCHRIGQNKAV 1300
Score = 41 (19.5 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 869 FAMLRWDRQFLDGILDVFMEAMDGELNENHP-DRGKVRAVT-RLLLIPS-RSETNL 921
FA L + +G+L F E+ G+ N NH D R T L+ PS ++T L
Sbjct: 399 FAGLDPEDLLQEGLLPQFDESPFGQDNSNHVLDHDLDRQFTSHLVSRPSDMAQTQL 454
Score = 40 (19.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 714 LNEKKILNLMNIVIQLRKV----CNHPELFER 741
+ E++ + + LRKV HP+LFER
Sbjct: 1915 ITEERASRTLYRIELLRKVREQALRHPQLFER 1946
Score = 39 (18.8 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 403 LDVSVAGSGNIDLHNPSTMPVTSTVQT 429
LD +V+G+ +++++ +T P S+ QT
Sbjct: 200 LDANVSGAHRVNVNHLATAP--SSQQT 224
Score = 38 (18.4 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 894 LNENHPDRGKVRA 906
LNEN D G RA
Sbjct: 2853 LNENSTDEGSERA 2865
Score = 38 (18.4 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 902 GKVRAVTRLLLIPSRSETNLL 922
G+ + +TRL + S SET+L+
Sbjct: 2377 GQQQYLTRLRELQSTSETSLV 2397
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 486 (176.1 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 125/365 (34%), Positives = 202/365 (55%)
Query: 386 DTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGS-LKEYQLKG 444
D + +K+ E +A+ D ++D P+ Q+ + G+ L+EYQL+G
Sbjct: 816 DVDLAKIEEFEQLQASRPDTR-----HLDRPPPNIWKKID--QSRDYKNGNQLREYQLEG 868
Query: 445 LQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 503
L WL+ N Y + N ILADEMGLGKTIQ++ FL + I GPFL++AP S + NW
Sbjct: 869 LNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWER 926
Query: 504 EISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRDAGFHILITSYQLLVADEK 558
E R D+ + Y G L R ++++ + R+ R F +IT++++++
Sbjct: 927 EF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCG 985
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
++W+ +++DEA +K+ N + L N +++LLTGTP+QN + EL++LLHF+
Sbjct: 986 ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLE 1045
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P F S F + E G E Q+ +L AILKP MLRR+K+DV +L K
Sbjct: 1046 PLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE 1095
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPEL 738
E ++ +L++ Q+ +Y+AI K + + L S+G + + NL+N +++LRK CNHP L
Sbjct: 1096 ETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVPNLVNTMMELRKCCNHPYL 1150
Query: 739 FERNE 743
+ E
Sbjct: 1151 IKGAE 1155
Score = 322 (118.4 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1168 PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1227
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 1228 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1287
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 1288 QAQARCHRIGQNKAV 1302
Score = 63 (27.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 34/152 (22%), Positives = 65/152 (42%)
Query: 403 LDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWL-VNCYEQG-LNGIL 460
+DV+V+G + +++P M ST Q L + + +L + +++G NG
Sbjct: 200 MDVNVSGPHRVSVNHPPQMNNASTSQQ-SLSMQQFSQTSNPSVHFLKCSSHQEGNFNGP- 257
Query: 461 ADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVL--NNWADEISRFCPDLKTLPYW 518
+ M + F +H + N P ++ P++VL N+ +S F P+
Sbjct: 258 SPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQPSAVLAPNHTNQTLSDFTGSNSFSPHR 317
Query: 519 GGLQERMVLRKNINPKRLYRRDAGFHILITSY 550
G QE + +NP + F +L +S+
Sbjct: 318 GIKQEST--QHMLNPNTSLNSN-NFQMLHSSH 346
Score = 42 (19.8 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 971 QCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPAL 1030
Q + + Y T+ L+RL+ + RT++N + IQ+I PV +
Sbjct: 1767 QLMEGDKVYWPTQSALTTRLRRLITAYQRTNKN----------RQIQQIQPTFPVPASVM 1816
Query: 1031 QLTYQ 1035
Q Y+
Sbjct: 1817 QPLYE 1821
Score = 40 (19.1 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 714 LNEKKILNLMNIVIQLRKV----CNHPELFER 741
+ E++ + + LRKV HP+LFER
Sbjct: 1917 ITEERASRTLYRIELLRKVREQALRHPQLFER 1948
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 485 (175.8 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 116/313 (37%), Positives = 182/313 (58%)
Query: 437 LKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
L+EYQL+GL WL+ N Y + N ILADEMGLGKTIQ++ FL + I GPFL++AP
Sbjct: 862 LREYQLEGLNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPL 919
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRDAGFHILITSY 550
S + NW E R D+ + Y G L R ++++ + R+ R F +IT++
Sbjct: 920 STIANWEREF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTF 978
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
++++ ++W+ +++DEA +K+ N + L N +++LLTGTP+QN + EL
Sbjct: 979 EMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEEL 1038
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
++LLHF+ P F S F + E G E Q+ +L AILKP MLRR+K+DV
Sbjct: 1039 FSLLHFLEPLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1088
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
+L K E ++ +L++ Q+ +Y+AI K + + L S+G + + NL+N +++LR
Sbjct: 1089 EKKLAPKEETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVPNLVNTMMELR 1143
Query: 731 KVCNHPELFERNE 743
K CNHP L + E
Sbjct: 1144 KCCNHPYLIKGAE 1156
Score = 322 (118.4 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1169 PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1228
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 1229 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1288
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 1289 QAQARCHRIGQNKAV 1303
Score = 53 (23.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 29/125 (23%), Positives = 51/125 (40%)
Query: 403 LDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLV--NCYEQGLNGIL 460
+DV+V+G + +++PS + ST Q L + + +L N E NG
Sbjct: 200 MDVNVSGPHRVSVNHPSQITNASTSQQ-SLSMQQFSQTSNPSVHFLKCSNHQEGNFNGP- 257
Query: 461 ADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVL--NNWADEISRFCPDLKTLPYW 518
+ M + F +H + N P ++ ++VL N+ +S F P+
Sbjct: 258 SPNMTSCSVSNSQQFSSHYSFSSNHVSPNNLLQASAVLAPNHTNQTLSDFTGSNSFSPHR 317
Query: 519 GGLQE 523
G QE
Sbjct: 318 GIKQE 322
Score = 40 (19.1 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 714 LNEKKILNLMNIVIQLRKV----CNHPELFER 741
+ E++ + + LRKV HP+LFER
Sbjct: 1918 ITEERASRTLYRIELLRKVREQALRHPQLFER 1949
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 459 (166.6 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 109/298 (36%), Positives = 169/298 (56%)
Query: 430 PELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
P K G L+++QL GL W+ + + NGILADEMGLGKT+Q +AFL+ L + GP
Sbjct: 354 PVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGP 413
Query: 489 FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYR--RDAGFHIL 546
LVV P S + W + ++ PD+ + Y G + R K I LY R F++L
Sbjct: 414 HLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEAR----KTIREYELYNQNRKPKFNVL 469
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
+T+Y+ ++ D+ KWQ++ +DEA +K++ S ++ L F NRLL+TGTP+QNN
Sbjct: 470 LTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNN 529
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRV 666
+ EL AL +F+MP F ++ + F I+S E + L + PF+LRR+
Sbjct: 530 VKELAALCNFLMPGKFTIDQEID--FET-IDSE-------QEQYIKDLQKKISPFILRRL 579
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMN 724
KKDV L +K+E ++ +LS Q +Y+ I K + A L +RG ++ +LN+M+
Sbjct: 580 KKDVEKSLPSKSERILRVELSDIQTEYYKNIITK-NYAALNAGNRG--SQISLLNIMS 634
Score = 333 (122.3 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 70/126 (55%), Positives = 87/126 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
++ SGK+ L+ LL RLR E HRVL+F+QM +ML+IL DYM + Y++ RLDG+
Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S F FLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+G
Sbjct: 729 RKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 788
Query: 1170 QTKDVS 1175
Q VS
Sbjct: 789 QKNHVS 794
Score = 315 (115.9 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
Identities = 78/218 (35%), Positives = 123/218 (56%)
Query: 528 RKNINPKRLYR--RDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWK 585
RK I LY R F++L+T+Y+ ++ D+ KWQ++ +DEA +K++ S ++
Sbjct: 449 RKTIREYELYNQNRKPKFNVLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYE 508
Query: 586 TLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT 645
L F NRLL+TGTP+QNN+ EL AL +F+MP F ++ + F I+S
Sbjct: 509 ALKGFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEID--FET-IDSE------ 559
Query: 646 LNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAG 705
E + L + PF+LRR+KKDV L +K+E ++ +LS Q +Y+ I K + A
Sbjct: 560 -QEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITK-NYAA 617
Query: 706 LFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNE 743
L +RG ++L+NI+ +L+K NHP LF+ E
Sbjct: 618 LNAGNRGSQ-----ISLLNIMSELKKASNHPYLFDGAE 650
Score = 41 (19.5 bits), Expect = 5.5e-38, Sum P(2) = 5.5e-38
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 715 NEKKI--LNLMNIVIQLRKVCNHPELFERNEGS 745
N++K+ LNL +++ PEL E N GS
Sbjct: 862 NQQKLENLNLDDVLSHAEDHVTTPELGESNLGS 894
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 506 (183.2 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 120/329 (36%), Positives = 184/329 (55%)
Query: 427 VQTPELFKG--SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
+ T +++K SL+EYQ +G+ WL+ CY N ILADEMGLGKT+Q + FL+ + +
Sbjct: 1185 MSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDY-G 1243
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVL--------RKNINPKRL 536
I GPFLVV P S + NW E + D+ + Y G R VL +++ K
Sbjct: 1244 IHGPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNW 1302
Query: 537 YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSN-SIRWKTLLSFNCRNR 595
+ LIT+++ +V+D ++ +++ W+ V+DEA +K+ N + LL+F +R
Sbjct: 1303 KKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHR 1362
Query: 596 LLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLH 655
+LLTGTP+QNN+ EL++LL+F+ P FD+ F E F G + Q+ +L
Sbjct: 1363 VLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQF----------GSCQTDDQVQKLQ 1412
Query: 656 AILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLN 715
ILKP MLRR+K+DV L K E ++ +LS Q+ FY+AI + + HL
Sbjct: 1413 EILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAI---------LERNFSHLC 1463
Query: 716 E-KKILNLMNIVIQLRKVCNHPELFERNE 743
+ +LMN++++LRK CNHP L E
Sbjct: 1464 KGTSAPSLMNVMMELRKCCNHPFLINGAE 1492
Score = 306 (112.8 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 63/123 (51%), Positives = 87/123 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGK+ ++ LL +LR + H+VL+F+QM K+L++LE+++ Y + R+DG+
Sbjct: 1516 LIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDL 1575
Query: 1111 RRDMVRDF-QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F + SD FVFLL TRAGGLGINLTAADTVI ++SDWNP DLQA R HR+G
Sbjct: 1576 RQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIG 1635
Query: 1170 QTK 1172
Q K
Sbjct: 1636 QKK 1638
Score = 39 (18.8 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 164 EKGETYEIIERALPXXXXXXXDPSVIEKEEMEKIGKVW 201
E GE E + + + IE+EE+E+ W
Sbjct: 1027 ENGENGESVGNGESSKSKTESETNEIEEEEVEQFLIKW 1064
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 486 (176.1 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 119/323 (36%), Positives = 186/323 (57%)
Query: 428 QTPELFKGS-LKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
Q+ E G+ L+EYQL+GL WL+ N Y + N ILADEMGLGKTIQ++ FL + I
Sbjct: 849 QSREYKNGNQLREYQLEGLNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEVLLT-GI 906
Query: 486 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRD 540
GPFL++AP S + NW E R D+ + Y G L R ++++ + R+ R
Sbjct: 907 RGPFLIIAPLSTIANWEREF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 965
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
F +IT++++++ ++W+ +++DEA +K+ N + L N +++LLTG
Sbjct: 966 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1025
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
TP+QN + EL++LLHF+ P F S F + E G E Q+ +L AILKP
Sbjct: 1026 TPLQNTVEELFSLLHFLEPLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKP 1075
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
MLRR+K+DV L K E ++ +L++ Q+ +Y+AI K + + L S+G + +
Sbjct: 1076 MMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVP 1130
Query: 721 NLMNIVIQLRKVCNHPELFERNE 743
NL+N +++LRK CNHP L + E
Sbjct: 1131 NLVNTMMELRKCCNHPYLIKGAE 1153
Score = 322 (118.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1166 PSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1225
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 1226 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1285
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 1286 QAQARCHRIGQNKAV 1300
Score = 43 (20.2 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 371 AQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
AQ SK K N CSKL+E T+ L +++ G N + S+ ++ Q P
Sbjct: 566 AQRVKSKPKDRDNRKPKACSKLKEK--TKIGKLIITL-GK-NHKRRSESSDELSDAEQMP 621
Query: 431 E-LFK 434
+ FK
Sbjct: 622 QHTFK 626
Score = 43 (20.2 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 869 FAMLRWDRQFLDGILDVFMEAMDGELNENHP-DRGKVRAVT-RLLLIPS-RSETNL 921
FA L + +G+L F E+ G+ N NH D R T L+ PS ++T L
Sbjct: 399 FAGLDPEDLLQEGLLPQFDESPFGQDNSNHVLDHDLDRQFTSHLMARPSDMAQTQL 454
Score = 40 (19.1 bits), Expect = 9.7e-38, Sum P(4) = 9.7e-38
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 714 LNEKKILNLMNIVIQLRKV----CNHPELFER 741
+ E++ + + LRKV HP+LFER
Sbjct: 1917 ITEERASRTLYRIELLRKVREQALRHPQLFER 1948
Score = 39 (18.8 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 629 NEWFSKGIESHAEH--GGTLNEHQLNRLHAILKPFMLRR 665
N W K I+ E+ G L E+QL L+ +L + RR
Sbjct: 842 NIW--KKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRR 878
Score = 38 (18.4 bits), Expect = 9.7e-38, Sum P(4) = 9.7e-38
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 894 LNENHPDRGKVRA 906
LNEN D G RA
Sbjct: 2849 LNENSTDEGSERA 2861
Score = 37 (18.1 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 256 TRKLARDMLLFWKRVD 271
TR+L R WK++D
Sbjct: 833 TRQLDRPPSNIWKKID 848
Score = 37 (18.1 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 600 GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
GTP+ MA+ L F ++ F + H++
Sbjct: 58 GTPVHQKMADFEQLNQFDSMKFHQVNQSFGSPVEHVLSPHSQ 99
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 499 (180.7 bits), Expect = 7.6e-68, Sum P(2) = 7.6e-68
Identities = 118/316 (37%), Positives = 178/316 (56%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
+K YQ+ G+ WL +E L+ ILAD+MGLGKT Q +AFLAHL E K I GP LVV P+S
Sbjct: 564 MKNYQIVGINWLSLLFENELSCILADDMGLGKTCQVIAFLAHLYE-KGIKGPHLVVVPSS 622
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA- 555
+ NW E +FCP L +PY+ R +R+ I R D +++IT+Y +
Sbjct: 623 TIENWLREFQKFCPTLSVMPYYADQNVRAQIREQIEGNR----D-DINVVITTYTIAKGK 677
Query: 556 -DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D + R + + V DE +KSS S+ ++ L+ R RLLLTGTP+QNN+ EL +LL
Sbjct: 678 VDAHFLRNMDFCACVYDEGHMLKSSTSVLYEKLIRIRARFRLLLTGTPLQNNLQELASLL 737
Query: 615 HFIMPTLFDSHEQFNEW-FSKGIESHAE-HGGTLNEHQLNRLHAILKPFMLRRVKKDVIS 672
FI+P +F + ++ FS ++ E H L+ ++ R ++LKPF+LRR K VI
Sbjct: 738 GFILPKVFQERKDDLQYIFSNKAKTVDESHSALLSAQRIERAKSMLKPFVLRRKKHQVI- 796
Query: 673 ELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKV 732
+L K + +C++++ Q+ Y+ KN++ L D + G K N I+++LR+
Sbjct: 797 DLPAKISRVEYCEMNAAQREIYEHEKNEVKKL-LEDRAAGKKTGNKSAN---ILMKLRQA 852
Query: 733 CNHPELFERNEGSSYL 748
HP L R+ L
Sbjct: 853 AIHPLLHRRHYNDKIL 868
Score = 279 (103.3 bits), Expect = 7.6e-68, Sum P(2) = 7.6e-68
Identities = 55/121 (45%), Positives = 85/121 (70%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGK+ L LL+R + RVL+F+Q ++ILE + + +++RLDG++++ DR+
Sbjct: 924 DSGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTSVEDRQS 983
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F +DI VFLLST+AGG GINL A+ VI ++S +NP D+QA +RAHR+GQT++
Sbjct: 984 IMDTFHENTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHRVGQTRE 1043
Query: 1174 V 1174
V
Sbjct: 1044 V 1044
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 494 PASVLNNWADEISRFCPDLKTLP 516
P + + A +RFCP K P
Sbjct: 98 PGRLSSLMAPSGTRFCPPAKRAP 120
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 485 (175.8 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 116/313 (37%), Positives = 182/313 (58%)
Query: 437 LKEYQLKGLQWLV-NCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
L+EYQL+GL WL+ N Y + N ILADEMGLGKTIQ++ FL + I GPFL++AP
Sbjct: 860 LREYQLEGLNWLLFNWYNRR-NCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPL 917
Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRK-----NINPKRLYRRDAGFHILITSY 550
S + NW E R D+ + Y G L R ++++ + R+ R F +IT++
Sbjct: 918 STIANWEREF-RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTF 976
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
++++ ++W+ +++DEA +K+ N + L N +++LLTGTP+QN + EL
Sbjct: 977 EMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEEL 1036
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
++LLHF+ P F S F + E G E Q+ +L AILKP MLRR+K+DV
Sbjct: 1037 FSLLHFLEPLRFPSESTFMQ----------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1086
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
+L K E ++ +L++ Q+ +Y+AI K + + L S+G + + NL+N +++LR
Sbjct: 1087 EKKLAPKEETIIEVELTNIQKKYYRAILEK-NFSFL---SKG-AGQTNVPNLVNTMMELR 1141
Query: 731 KVCNHPELFERNE 743
K CNHP L + E
Sbjct: 1142 KCCNHPYLIKGAE 1154
Score = 322 (118.4 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 67/135 (49%), Positives = 89/135 (65%)
Query: 1041 PPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYL 1100
P F ++ +GKL +D LL +++A H+VL+F+QM + L+ILEDY+ +++Y Y
Sbjct: 1167 PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1226
Query: 1101 RLDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
R+DG R+ + F SD FVFLL TRAGGLGINLTAADT I ++SDWNP DL
Sbjct: 1227 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1286
Query: 1160 QAMDRAHRLGQTKDV 1174
QA R HR+GQ K V
Sbjct: 1287 QAQARCHRIGQNKAV 1301
Score = 40 (19.1 bits), Expect = 4.2e-37, Sum P(4) = 4.2e-37
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 714 LNEKKILNLMNIVIQLRKV----CNHPELFER 741
+ E++ + + LRKV HP+LFER
Sbjct: 1916 ITEERASRTLYRIELLRKVREQALRHPQLFER 1947
Score = 38 (18.4 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 256 TRKLARDMLLFWKRVD 271
TR+L R WK++D
Sbjct: 834 TRRLDRPPSNIWKKID 849
Score = 38 (18.4 bits), Expect = 4.2e-37, Sum P(4) = 4.2e-37
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 902 GKVRAVTRLLLIPSRSETNLL 922
G+ + +TRL + S SET+L+
Sbjct: 2378 GQQQYLTRLRELQSASETSLV 2398
Score = 37 (18.1 bits), Expect = 6.5e-38, Sum P(3) = 6.5e-38
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 971 QCSDRNFTYRMTEEQHDPWLKRLLIGFARTSEN 1003
Q + + Y T+ L+RL+ + RT++N
Sbjct: 1766 QLMEGDKVYWPTQSALTTRLRRLITAYQRTNKN 1798
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 511 (184.9 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 129/345 (37%), Positives = 190/345 (55%)
Query: 412 NIDLHNPSTMPVTSTVQT--PELFKGSLK--EYQLKGLQWLVNCYEQGLNGILADEMGLG 467
N D P S+ T P F +K +YQ+ G+ WL YE L GILADEMGLG
Sbjct: 358 NFDQMKSFGTPANSSFITTPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLG 417
Query: 468 KTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVL 527
KT Q +AF + L +KNI GP LV+APAS + NW E ++FCP LK Y+G ER +
Sbjct: 418 KTCQTIAFFS-LLMDKNINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEI 476
Query: 528 RKNINPKRLYRRDAGFHILITSYQLLV---ADEKYFRRVKWQYMVLDEAQAIKSSNSIRW 584
R+ IN + D+ +++++T+Y+L AD + R K+ V DE +K+ S R+
Sbjct: 477 RERINSNK----DS-YNVMLTTYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERY 531
Query: 585 KTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFD-SHEQFNEWFS--KGIESHAE 641
+ L+S R+LLTGTP+QNN+ EL +LL FI+P +FD + + F+ K ES E
Sbjct: 532 RHLMSIPADFRVLLTGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFE 591
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
L+E +++R ++ PF+LRR K V+ L KT ++ C+ S ++ Y +K
Sbjct: 592 RA-LLSEQRVSRAKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQ 650
Query: 702 SLAGLFDNSRGHLNEKKILNLMN-------IVIQLRKVCNHPELF 739
S+ L D + N NL +++QLRK+ +HP LF
Sbjct: 651 SVNSLLDENVMKTNLDTNANLAKKKSTAGFVLVQLRKLADHPMLF 695
Score = 259 (96.2 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
D+ K++ L LL RV+LF+Q T++L+IL+ M ++LR DGS+ + R+D
Sbjct: 759 DATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQD 818
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F I VFLLST+AGG GINL A+ VI Y+ +NP DLQA DRAHR+GQ K+
Sbjct: 819 LIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKE 878
Query: 1174 VS 1175
V+
Sbjct: 879 VT 880
Score = 44 (20.5 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 25/114 (21%), Positives = 45/114 (39%)
Query: 25 TPKVMYEPAYLDIGE--GITYRIPLSYDKLAPSLNLPSFSDIQVEEFYLKGTLDLGSLAA 82
TP ++D G Y + + P + PS+ D + L +L SL++
Sbjct: 109 TPSAGTPSQFMDAQNPYGAVYNALSQFSETEPKM--PSYMDDEEASDSLPLSLSSQSLSS 166
Query: 83 MMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGNSSI 136
+ N K P R+ M E R +L L+ + +S + + + D N +
Sbjct: 167 QVTNQKP-APH-RLTMRE-RYAANNLTNGLQFTLPLSSRKTYEPEADDDSNDDM 217
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 442 (160.7 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 104/273 (38%), Positives = 162/273 (59%)
Query: 429 TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
TPE G+L YQL+GL +L + + N ILADEMGLGKTIQ++AFLA L EE N+ P
Sbjct: 217 TPEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE-NL-SP 274
Query: 489 FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY---RRDAGFHI 545
LVVAP S + NW E + + P + + Y G + R V+ ++ Y R + F +
Sbjct: 275 HLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEH----EFYFSEGRKSKFDV 330
Query: 546 LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
L+T+Y+++ +KW M++DE +K+ S + +L F ++ +LLTGTP+QN
Sbjct: 331 LLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQN 390
Query: 606 NMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRR 665
N+ EL+AL+HF+ F S E+F + +K E Q++RLH +L P +LRR
Sbjct: 391 NLNELFALMHFLDADKFGSLEKFQD-INK-------------EEQISRLHQMLAPHLLRR 436
Query: 666 VKKDVISE-LTTKTEVMVHCKLSSRQQAFYQAI 697
+KKDV+ + + K E+++ +SS+Q+ Y+A+
Sbjct: 437 LKKDVLKDKVPPKKELILRVDMSSQQKEVYKAV 469
Score = 330 (121.2 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 68/134 (50%), Positives = 89/134 (66%)
Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
KLL SGKLQ LD ++ +L+ + HRVL++ Q L +LEDY ++ + Y R+DG +
Sbjct: 518 KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGP 577
Query: 1110 DRRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1168
+R+ + F S+ F FLLSTRAGG+GINL ADTVI Y+SDWNP DLQAM R HRL
Sbjct: 578 ERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRL 637
Query: 1169 GQTKDVSSWLKLCH 1182
GQT V + +L H
Sbjct: 638 GQTNKVMIY-RLIH 650
Score = 151 (58.2 bits), Expect = 9.0e-36, Sum P(2) = 9.0e-36
Identities = 45/165 (27%), Positives = 88/165 (53%)
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
I+W T + + +RL + + +++++ + H ++ T NE F+ A+
Sbjct: 348 IKW-TCMIIDEGHRLKNQKSKLYSSLSQFTSK-HIVLLTGTPLQNNLNELFALMHFLDAD 405
Query: 642 HGGTLN-------EHQLNRLHAILKPFMLRRVKKDVISE-LTTKTEVMVHCKLSSRQQAF 693
G+L E Q++RLH +L P +LRR+KKDV+ + + K E+++ +SS+Q+
Sbjct: 406 KFGSLEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEV 465
Query: 694 YQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPEL 738
Y+A+ N+ L +K+ + N++++LR+VC+HP L
Sbjct: 466 YKAV---------ITNNYQVLTKKRDAKISNVLMKLRQVCSHPYL 501
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 390 (142.3 bits), Expect = 9.1e-67, Sum P(2) = 9.1e-67
Identities = 83/206 (40%), Positives = 128/206 (62%)
Query: 545 ILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
+ +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLLLTGTP+Q
Sbjct: 3 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 62
Query: 605 NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHAILKPFML 663
NN+ ELW+LL+F++P +F+S + F+ WF + L + +L RLH +L+PF+L
Sbjct: 63 NNLHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDKKLVERLHMVLRPFLL 114
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLNEKKILNL 722
RR+K DV L K EV ++ LS Q+ +Y I K I + NS G +++ + L
Sbjct: 115 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKMDK---MRL 167
Query: 723 MNIVIQLRKVCNHPELFERNE-GSSY 747
+NI++QLRK CNHP LF+ E G Y
Sbjct: 168 LNILMQLRKCCNHPYLFDGAEPGPPY 193
Score = 375 (137.1 bits), Expect = 9.1e-67, Sum P(2) = 9.1e-67
Identities = 78/143 (54%), Positives = 101/143 (70%)
Query: 1034 YQIFGSCP-PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM 1092
Y G+ P P + D L+T+SGK+ LD LL +L+ + RVL+F+QMT++L+ILEDY
Sbjct: 182 YLFDGAEPGPPYTTD-MHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYC 240
Query: 1093 NYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
+R Y Y RLDG + +R+D + + S FVF+LSTRAGGLGINL AD VI Y+S
Sbjct: 241 MWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDS 300
Query: 1152 DWNPTLDLQAMDRAHRLGQTKDV 1174
DWNP +DLQAMDRAHR+GQTK V
Sbjct: 301 DWNPQVDLQAMDRAHRIGQTKTV 323
Score = 38 (18.4 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 499 PPRLFELLEKEILYYRKTIGYKVPR 523
>MGI|MGI:1276124 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
Length = 3072
Score = 501 (181.4 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 107/277 (38%), Positives = 153/277 (55%)
Query: 423 VTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT+ V+ P L G+L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA
Sbjct: 1074 VTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLA 1133
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
+ WGP LVV + + W E+ R+CP LKTL Y G +E R+ +
Sbjct: 1134 CNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQE------WTEP 1187
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
FHI ITSY+ F RV W+ +V+DE Q +K W+ + + RLLL
Sbjct: 1188 NNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLID 1247
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
P+ N ELW ++HF++P + + F +++ E + RLH + +P
Sbjct: 1248 VPLHNTFLELWTMVHFLIPGISRPYLSFP------LKAPNEENQDYYHKMVIRLHRVTQP 1301
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
F+LRR K+DV +LT K E ++ C+LSSRQ+A Y+ +
Sbjct: 1302 FILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDV 1338
Score = 312 (114.9 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 79/258 (30%), Positives = 129/258 (50%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW + R C LK L W GL+ + + + KR + FHI ITSY
Sbjct: 1138 NWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEWTEPNNFHICITSY 1197
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ F RV W+ +V+DE Q +K W+ + + RLLL P+ N EL
Sbjct: 1198 KQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLIDVPLHNTFLEL 1257
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ E + RLH + +PF+LRR K+DV
Sbjct: 1258 WTMVHFLIPGISRPYLSFP------LKAPNEENQDYYHKMVIRLHRVTQPFILRRTKRDV 1311
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
+LT K E ++ C+LSSRQ+A Y+ + L ++ L +++++++ +L+
Sbjct: 1312 EKQLTRKYEHVLKCRLSSRQKALYEDVI-------LQPRTQEALKSGHFVSVLSVLTRLQ 1364
Query: 731 KVCNHPELFE-RNEGSSY 747
++CNHP L E R GSS+
Sbjct: 1365 RICNHPGLVEPRVPGSSF 1382
Score = 277 (102.6 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 53/121 (43%), Positives = 82/121 (67%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L ILL++L++E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1812 DSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQE 1871
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF LLST + GINL ADTV+FY++D NP +D +A + R+G+ KD
Sbjct: 1872 LMRSFNRDRRIFCALLSTHSRATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1931
Query: 1174 V 1174
+
Sbjct: 1932 I 1932
Score = 55 (24.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 967 PINVQCS---DRNFTYRMTEEQHDPWLKRLLIG-FARTSENIGPRKPGGPHQLIQEIDSE 1022
P NVQ R+FT E+ P L FA ++ P+ PG +Q IQ++ S
Sbjct: 7 PQNVQHQLQRSRSFTGSEEEQPAHPNLPPSPAAPFAPSASPSAPQSPG--YQ-IQQLMSR 63
Query: 1023 LPVAKPALQLTYQIFG 1038
PVA + +T Q G
Sbjct: 64 SPVAGQNVNITLQNVG 79
Score = 44 (20.5 bits), Expect = 7.4e-42, Sum P(2) = 7.4e-42
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1000 TSENIGPRKPGGPHQLIQEIDSELPVAKPALQL 1032
T+ + + PGGP S+ P +P LQ+
Sbjct: 3024 TTASASLQTPGGPSPAQLPASSDSPSQQPKLQM 3056
Score = 43 (20.2 bits), Expect = 9.4e-42, Sum P(2) = 9.4e-42
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQ 1031
P++P P Q S+ P +PA+Q
Sbjct: 2484 PQQPPPPVPQPQAASSQTPAGQPAVQ 2509
Score = 40 (19.1 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 33/129 (25%), Positives = 55/129 (42%)
Query: 947 LSNIKLLNATYTFIPQAQAPPINVQC------SDRNFTYRMTEEQHDPWL--KRLLIGFA 998
+ ++ L T IP+A+ PP+ V+ +D + R +++H + R L A
Sbjct: 2178 IDSVMCLMYETTPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRSLFDRA 2237
Query: 999 RTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLL-TDSGK 1057
T + R+ G + + + P AKP TY + S P Q P L+ D
Sbjct: 2238 -TPGMLKIRREGKEQKKNLLLKQQTPFAKPLP--TY-VKSSGEPAQD-SPDWLIGEDWAL 2292
Query: 1058 LQTLDILLK 1066
LQ + LL+
Sbjct: 2293 LQAVKQLLE 2301
Score = 39 (18.8 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 439 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 483
+Y L+ +QW+ + Q LA L +T+ L EE+
Sbjct: 812 DYLLEEMQWMATDFAQERRWKLAAAKKLVRTVARHHEEKKLREER 856
>UNIPROTKB|Q96L91 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
"histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
Ensembl:ENST00000330386 Ensembl:ENST00000332482
Ensembl:ENST00000333577 Ensembl:ENST00000389561
Ensembl:ENST00000389562 Ensembl:ENST00000537902
Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
Uniprot:Q96L91
Length = 3159
Score = 498 (180.4 bits), Expect = 2.5e-66, Sum P(2) = 2.5e-66
Identities = 104/277 (37%), Positives = 155/277 (55%)
Query: 423 VTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
VT++V+ P L G+L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA
Sbjct: 1075 VTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLA 1134
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
+ WGP LVV + + W E+ R+CP LK L Y G +E R+ +
Sbjct: 1135 CNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQE------WAEP 1188
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
FH+ ITSY F RV+W+ +V+DE Q +K W+ + + + RLLL
Sbjct: 1189 NSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLID 1248
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
+P+ N ELW ++HF++P + + S + + +E + RLH + +P
Sbjct: 1249 SPLHNTFLELWTMVHFLVPGIS------RPYLSSPLRAPSEESQDYYHKVVIRLHRVTQP 1302
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
F+LRR K+DV +LT K E ++ C+LS+RQ+A Y+ +
Sbjct: 1303 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDV 1339
Score = 331 (121.6 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 82/260 (31%), Positives = 136/260 (52%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW + R C LK L W GL+ + + + KR + FH+ ITSY
Sbjct: 1139 NWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSY 1198
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
F RV+W+ +V+DE Q +K W+ + + + RLLL +P+ N EL
Sbjct: 1199 TQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLEL 1258
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + S + + +E + RLH + +PF+LRR K+DV
Sbjct: 1259 WTMVHFLVPGIS------RPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDV 1312
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LS+RQ+A Y+ + I G + + GH +N+++I+++L
Sbjct: 1313 EKQLTKKYEHVLKCRLSNRQKALYEDV---ILQPGTQEALKSGHF-----VNVLSILVRL 1364
Query: 730 RKVCNHPELFE-RNEGSSYL 748
+++CNHP L E R+ GSSY+
Sbjct: 1365 QRICNHPGLVEPRHPGSSYV 1384
Score = 280 (103.6 bits), Expect = 2.5e-66, Sum P(2) = 2.5e-66
Identities = 59/150 (39%), Positives = 94/150 (62%)
Query: 1026 AKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKM 1084
A P Q Q + P + F +L+ DSGKL+ L ILL++L++E RVL+ +QM M
Sbjct: 1869 AAPYFQQLRQT--TAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILM 1926
Query: 1085 LNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAAD 1144
L+ILE ++N+ Y+R+D +++ R++++R F IF +LST + GINL AD
Sbjct: 1927 LDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVEAD 1986
Query: 1145 TVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
TV+FY++D NP +D +A + R+G+ KD+
Sbjct: 1987 TVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 2016
Score = 43 (20.2 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1065 LKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDI 1124
LK L+ R+ L + ++L + +Y Y +DG + +M Q SDI
Sbjct: 2201 LKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQDDSDI 2260
Query: 1125 FV 1126
++
Sbjct: 2261 YL 2262
Score = 42 (19.8 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 674 LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAG 705
+ T+ V SS+QQ F QA+ + +AG
Sbjct: 462 IATQLPPKVSAAFSSQQQPFQQALAGSL-VAG 492
Score = 41 (19.5 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 947 LSNIKLLNATYTFIPQAQAPPINVQ 971
L ++ L T IP+A+ PP+ V+
Sbjct: 2262 LDSVMCLMYEATPIPEAKLPPVYVR 2286
Score = 41 (19.5 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAK 1050
P++P P Q S+ P PA+Q Q P PAK
Sbjct: 2554 PQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAK 2598
Score = 40 (19.1 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 28/113 (24%), Positives = 43/113 (38%)
Query: 371 AQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
AQNA S Q +T TE L A ++ AG L + +P P
Sbjct: 757 AQNATSSQDSSQDTL-TEQITLENQVHQRIA--ELRKAG-----LWSQRRLPKLQEAPRP 808
Query: 431 ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK 483
+ S +Y L+ +QW+ + Q +A L +T+ L EE+
Sbjct: 809 K----SHWDYLLEEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREER 857
Score = 39 (18.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFG 1038
P P P IQ++ + P + +T Q G
Sbjct: 48 PSAPQSPSYQIQQLMNRSPATGQNVNITLQSVG 80
Score = 38 (18.4 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1009 PGGPHQLIQEIDSELPVAKPALQL 1032
PG P+ S+ P +P LQ+
Sbjct: 3120 PGAPNPAQVPASSDSPSQQPKLQM 3143
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 365 (133.5 bits), Expect = 6.5e-66, Sum P(3) = 6.5e-66
Identities = 73/135 (54%), Positives = 94/135 (69%)
Query: 1041 PPMQSFD-PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRY 1099
P Q F +L+T+SGK LD +L L+ H+VL+F+QMT ML+IL DY + R + +
Sbjct: 239 PVTQEFKIDEELVTNSGKFLILDRMLPELKKRCHKVLVFSQMTSMLDILMDYCHLRNFTF 298
Query: 1100 LRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDL 1159
RLDGS + +R + F ++F+FL+STRAGGLGINLTAADTVI Y+SDWNP DL
Sbjct: 299 SRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDL 358
Query: 1160 QAMDRAHRLGQTKDV 1174
QA DR HR+GQTK V
Sbjct: 359 QAQDRCHRIGQTKPV 373
Score = 306 (112.8 bits), Expect = 6.5e-66, Sum P(3) = 6.5e-66
Identities = 61/146 (41%), Positives = 93/146 (63%)
Query: 565 WQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDS 624
W+Y+++DE IK+ + L FN N+LLLTGTP+QNN++ELW+LL+F++P +FD
Sbjct: 4 WKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDD 63
Query: 625 HEQFNEWFS-KGIESHAEH--GGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVM 681
+ F WF + AE ++ L+ LH IL PF+LRR+K DV E+ K EV+
Sbjct: 64 LKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVV 123
Query: 682 VHCKLSSRQQAFYQAIKNKISLAGLF 707
V+ L ++Q+ FY AI N+ ++A +F
Sbjct: 124 VYAPLCNKQEIFYTAIVNR-TIANMF 148
Score = 66 (28.3 bits), Expect = 6.5e-66, Sum P(3) = 6.5e-66
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 720 LNLMNIVIQLRKVCNHPELFE 740
L L NI++ LRK CNHP + E
Sbjct: 214 LKLQNIMMLLRKCCNHPYMIE 234
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 482 (174.7 bits), Expect = 1.7e-65, Sum P(2) = 1.7e-65
Identities = 120/328 (36%), Positives = 181/328 (55%)
Query: 429 TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
+PE+ SLK+YQ G+ WL Y+ ++ ILAD+MGLGKT Q ++F A+L ++ N GP
Sbjct: 567 SPEI---SLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYL-KQINEPGP 622
Query: 489 FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG-FHILI 547
LVV P+S L NW E +F P LK PY+G LQER LR + R+AG + +++
Sbjct: 623 HLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRD------ILERNAGKYDVIV 676
Query: 548 TSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQ 604
T+Y L D + + + +V DE +K+S S R+ L+ RLLLTGTP+Q
Sbjct: 677 TTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQ 736
Query: 605 NNMAELWALLHFIMPTLFDSH-EQFNEWF---SKGIESHAEHGGTLNEHQLNRLHAILKP 660
NN+ EL +LL FIMP LF S E F+ F +K + + H L + + R ++KP
Sbjct: 737 NNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKP 796
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQ-----AIKNKISLA-GLFDNSRGHL 714
F+LRR K V+ L K + +C+L++ Q+ Y +++K + G
Sbjct: 797 FILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEK 856
Query: 715 NEKKILNLMNIVIQLRKVCNHPELFERN 742
++ + + N+++ LRK HP LF RN
Sbjct: 857 SKLQSSSSKNLIMALRKASLHPLLF-RN 883
Score = 275 (101.9 bits), Expect = 1.7e-65, Sum P(2) = 1.7e-65
Identities = 56/122 (45%), Positives = 84/122 (68%)
Query: 1055 SGKLQTLDILLKRLRAENH-RVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
SGK+ L LLK + + +VL+F+ T++L+ILE ++ Y++LRLDGS+ + DR+
Sbjct: 948 SGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQL 1007
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ F DI +F+LST+AGG GINL A+ VI ++ +NP D QA DRAHR+GQTK+
Sbjct: 1008 LIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKE 1067
Query: 1174 VS 1175
V+
Sbjct: 1068 VN 1069
Score = 38 (18.4 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 884 DVFMEAMDGELNEN-HPD 900
DV +EA+D EL ++ H D
Sbjct: 485 DVDLEAIDDELPQSEHED 502
Score = 37 (18.1 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 155 LQVYYVKVLEKGETYEIIER 174
++ YY + E+ E +I+ER
Sbjct: 648 IEPYYGSLQEREELRDILER 667
Score = 37 (18.1 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 928 IGPGYDPCEDLVVSHQERLLSNIK 951
IG Y+ + S +E+LL+N K
Sbjct: 219 IGKSYESSATQLGSAREKLLANRK 242
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 476 (172.6 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 122/333 (36%), Positives = 187/333 (56%)
Query: 417 NPSTMPVT---STVQTPELFKG-SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQA 472
N ST ++ ++ Q + G +LK YQ+ GL WL Y+ L+GILADEMGLGKT Q
Sbjct: 390 NTSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQV 449
Query: 473 MAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNIN 532
++FLA L +EK I LVV P+S L NW E +FCP L+ Y G ER IN
Sbjct: 450 ISFLASL-KEKGIQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSER------IN 502
Query: 533 PKRLYRRDAGFHILITSYQLLVA---DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS 589
KR Y D F +L+T+YQL D + R+ ++ + DE +K+ S R+K L++
Sbjct: 503 -KRYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMN 561
Query: 590 FNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE---HGGTL 646
RLL+TGTP+QNN+ EL +LL F++P +FD++ Q + K I++ ++ L
Sbjct: 562 IPANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYK-IKTTSDGDIERAYL 620
Query: 647 NEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGL 706
++ +++R I+ PF+LRR K++V+S+L K + + +C + Q + Y ++ + L L
Sbjct: 621 SQERISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSV---LELKNL 677
Query: 707 FDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ +R NI++QLRK H LF
Sbjct: 678 VNANRE-----------NILMQLRKAALHQLLF 699
Score = 282 (104.3 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 58/121 (47%), Positives = 84/121 (69%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DS K++ L LLK+ R N R+L+F+Q T++L+ILE +N +LRLDGS+ + R+
Sbjct: 763 DSAKVKKLCSLLKKSRP-NERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQ 821
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++ DF + VFLLST++GG GINLT A+ VI ++ +NP D+QA DRAHR+GQT+
Sbjct: 822 LIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRP 881
Query: 1174 V 1174
V
Sbjct: 882 V 882
Score = 51 (23.0 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 49 YDKLAPSLNLPSFSDIQVEE----FYLKGT-LDL----GSLAAMMANDKRFGPRSRVGMG 99
++K PSL + S+S Q E +YL T D+ LA+ +D+ F + R +
Sbjct: 481 FEKFCPSLRVESYSGTQSERINKRYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDIS 540
Query: 100 ---EPRPQYESLQARLKALVASNSPQKFSLKVSDT 131
E + R K L+ N P F L ++ T
Sbjct: 541 IFDEGHYLKNRMSERYKHLM--NIPANFRLLITGT 573
Score = 39 (18.8 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 66 VEEFYLKGTLDLGSLAAMMANDKRFGP---RSRVGMGEPRPQYESLQARLKALVASNSPQ 122
+++ L G+ S + AN K+FG +SR+ + + +++ A + P
Sbjct: 40 IQQLDLSGSFKNYSTTSSRANGKKFGQLAMQSRIFF-DTTDHKKYVESSYAAYDPHDQPP 98
Query: 123 KFSLKVSDTGNSSIPEGAAGSIQ 145
+ + + ++ N P S Q
Sbjct: 99 ERDVSLKESSNKINPSNFFDSEQ 121
>UNIPROTKB|Q47YP1 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 487 (176.5 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 111/322 (34%), Positives = 182/322 (56%)
Query: 425 STVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
+T+ PE +L+ YQ +GL WL E LNGILAD+MGLGKTIQ +A L ++
Sbjct: 650 TTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNGILADDMGLGKTIQTLAHLLIEKQQGR 709
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQ-ERMVLRKNINPKRLYRRDAGF 543
+ P L+VAP SV+ NWA+EI +F P L G + E+ + + +
Sbjct: 710 LTKPILIVAPTSVIFNWANEIDKFTPQLSYQVLHGNKRHEQFGCLEGVE-----NGENQV 764
Query: 544 HILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPI 603
I+ITSY L+ D ++ K+ Y+VLDEA IK++ + ++ L+ +++L LTGTP+
Sbjct: 765 DIIITSYALITKDLAHYTDRKFYYLVLDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPM 824
Query: 604 QNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFML 663
+N++ E WA +F++P QF + F IE H E L QL L+ +KPF+L
Sbjct: 825 ENHLGEFWAQFNFLLPGFLGGQRQFTKLFRTPIEKHGE----LERKQL--LNQRIKPFIL 878
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR K + +EL KTE++ ++ +Q Y++++ + + L D ++ + ++
Sbjct: 879 RRTKDKIATELPPKTEIIQTLRIEGKQAELYESVRLAMD-SRLKDIIADKGLKRSQIEVL 937
Query: 724 NIVIQLRKVCNHPELFERNEGS 745
+ +++LR+VCNHP+L + EG+
Sbjct: 938 DALLKLRQVCNHPKLLKL-EGA 958
Score = 266 (98.7 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 63/154 (40%), Positives = 95/154 (61%)
Query: 1021 SELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQ 1080
S++ V L+L Q+ P + + AK + S KL L L E ++L+F+Q
Sbjct: 932 SQIEVLDALLKLR-QVCNH-PKLLKLEGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQ 989
Query: 1081 MTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINL 1140
T ML+++ED + Y++L GS+T R+++V FQ R ++ VFL+S RAGG+G+NL
Sbjct: 990 FTSMLSLIEDELIDAGIGYVKLTGSTT--KRQEVVDKFQ-RGEVPVFLISLRAGGVGLNL 1046
Query: 1141 TAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
TAADTVI ++ WNP ++ QA DRA+R+GQ K V
Sbjct: 1047 TAADTVIHFDPWWNPAVENQATDRAYRIGQNKPV 1080
Score = 38 (18.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHG 643
P L + H NEW KG +G
Sbjct: 8 PELLEKHFTKNEW-KKGARIFQANG 31
Score = 37 (18.1 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 65 QVEEFYLKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQ----ARLKALVASNS 120
+++ F L+ T D +A + R+ G+ YES++ +RLK ++A
Sbjct: 872 RIKPFILRRTKD--KIATELPPKTEIIQTLRIE-GKQAELYESVRLAMDSRLKDIIADKG 928
Query: 121 PQKFSLKVSD 130
++ ++V D
Sbjct: 929 LKRSQIEVLD 938
>TIGR_CMR|CPS_3404 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 487 (176.5 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 111/322 (34%), Positives = 182/322 (56%)
Query: 425 STVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 484
+T+ PE +L+ YQ +GL WL E LNGILAD+MGLGKTIQ +A L ++
Sbjct: 650 TTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNGILADDMGLGKTIQTLAHLLIEKQQGR 709
Query: 485 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQ-ERMVLRKNINPKRLYRRDAGF 543
+ P L+VAP SV+ NWA+EI +F P L G + E+ + + +
Sbjct: 710 LTKPILIVAPTSVIFNWANEIDKFTPQLSYQVLHGNKRHEQFGCLEGVE-----NGENQV 764
Query: 544 HILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPI 603
I+ITSY L+ D ++ K+ Y+VLDEA IK++ + ++ L+ +++L LTGTP+
Sbjct: 765 DIIITSYALITKDLAHYTDRKFYYLVLDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPM 824
Query: 604 QNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFML 663
+N++ E WA +F++P QF + F IE H E L QL L+ +KPF+L
Sbjct: 825 ENHLGEFWAQFNFLLPGFLGGQRQFTKLFRTPIEKHGE----LERKQL--LNQRIKPFIL 878
Query: 664 RRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
RR K + +EL KTE++ ++ +Q Y++++ + + L D ++ + ++
Sbjct: 879 RRTKDKIATELPPKTEIIQTLRIEGKQAELYESVRLAMD-SRLKDIIADKGLKRSQIEVL 937
Query: 724 NIVIQLRKVCNHPELFERNEGS 745
+ +++LR+VCNHP+L + EG+
Sbjct: 938 DALLKLRQVCNHPKLLKL-EGA 958
Score = 266 (98.7 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 63/154 (40%), Positives = 95/154 (61%)
Query: 1021 SELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQ 1080
S++ V L+L Q+ P + + AK + S KL L L E ++L+F+Q
Sbjct: 932 SQIEVLDALLKLR-QVCNH-PKLLKLEGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQ 989
Query: 1081 MTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINL 1140
T ML+++ED + Y++L GS+T R+++V FQ R ++ VFL+S RAGG+G+NL
Sbjct: 990 FTSMLSLIEDELIDAGIGYVKLTGSTT--KRQEVVDKFQ-RGEVPVFLISLRAGGVGLNL 1046
Query: 1141 TAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
TAADTVI ++ WNP ++ QA DRA+R+GQ K V
Sbjct: 1047 TAADTVIHFDPWWNPAVENQATDRAYRIGQNKPV 1080
Score = 38 (18.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHG 643
P L + H NEW KG +G
Sbjct: 8 PELLEKHFTKNEW-KKGARIFQANG 31
Score = 37 (18.1 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 65 QVEEFYLKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQ----ARLKALVASNS 120
+++ F L+ T D +A + R+ G+ YES++ +RLK ++A
Sbjct: 872 RIKPFILRRTKD--KIATELPPKTEIIQTLRIE-GKQAELYESVRLAMDSRLKDIIADKG 928
Query: 121 PQKFSLKVSD 130
++ ++V D
Sbjct: 929 LKRSQIEVLD 938
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 530 (191.6 bits), Expect = 4.6e-65, Sum P(4) = 4.6e-65
Identities = 115/299 (38%), Positives = 173/299 (57%)
Query: 402 MLDVS-VAGSGNIDLHNPSTMPVTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNG 458
M D+S VA + + L S+ +T+ V+ TP L G L+EYQ GL WL Y + LNG
Sbjct: 1054 MRDISEVAAAAEVLLPKGSSR-ITTAVKYNTPSLLYGPLREYQKIGLDWLAKLYRKNLNG 1112
Query: 459 ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYW 518
ILADE GLGKT+Q +AF AHLA + WGP LVV + + W E+ R+CP LK L Y+
Sbjct: 1113 ILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILLYF 1172
Query: 519 GGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKS 578
G +E R+ + F++ ITSY+ L F +++W+Y+++DE Q IK+
Sbjct: 1173 GSQRELRAKRQE------WSEPNSFNVCITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKN 1226
Query: 579 SNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIES 638
W+ L S ++RLLL TP+ N + ELW ++HF++P + + F +++
Sbjct: 1227 MTEKHWEALFSLRSQHRLLLIDTPLHNTLMELWTMVHFLIPGISRPYLDFP------VKA 1280
Query: 639 HAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
E + RLH +++PF+LRR K+DV +LT K E ++ C+LSSRQ+A Y+ +
Sbjct: 1281 PNEENQDYCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDV 1339
Score = 333 (122.3 bits), Expect = 1.5e-43, Sum P(4) = 1.5e-43
Identities = 81/260 (31%), Positives = 142/260 (54%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW + R C LK L W GL+ + ++ + KR + F++ ITSY
Sbjct: 1139 NWGPHLVVVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSY 1198
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ L F +++W+Y+++DE Q IK+ W+ L S ++RLLL TP+ N + EL
Sbjct: 1199 KQLFKGHPAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLRSQHRLLLIDTPLHNTLMEL 1258
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ E + RLH +++PF+LRR K+DV
Sbjct: 1259 WTMVHFLIPGISRPYLDFP------VKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDV 1312
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LSSRQ+A Y+ + I G + + GH ++++++++QL
Sbjct: 1313 EKQLTKKYEHVLKCRLSSRQKAMYEDV---ILQPGTQEALKSGHF-----ISVLHVLMQL 1364
Query: 730 RKVCNHPELFE-RNEGSSYL 748
+++CNHP+L R +SY+
Sbjct: 1365 QRICNHPDLINPRLSSTSYV 1384
Score = 260 (96.6 bits), Expect = 4.6e-65, Sum P(4) = 4.6e-65
Identities = 54/150 (36%), Positives = 92/150 (61%)
Query: 1026 AKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKM 1084
A P L +I + P + F +L+ DSGKL+ L +LL +L++E RVL+ +QM M
Sbjct: 1793 AAPHLHQLRRI--TTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILM 1850
Query: 1085 LNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAAD 1144
L+ILE ++N+ ++R+D + R+++++ F IF +LS+ + G+NL AD
Sbjct: 1851 LDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLVEAD 1910
Query: 1145 TVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
TV+FY++D NP +D +A + R+G+ KD+
Sbjct: 1911 TVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 1940
Score = 55 (24.4 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTY 1034
R+FT EEQ + FA ++ P+ P +Q+ Q I S PVA + +T
Sbjct: 18 RSFTGSEGEEQQANLPQSPAASFAPSASPSAPQSPS--YQIQQFIMSRSPVAGQNVNITL 75
Query: 1035 QIFG 1038
Q G
Sbjct: 76 QNVG 79
Score = 48 (22.0 bits), Expect = 4.6e-43, Sum P(4) = 4.6e-43
Identities = 37/175 (21%), Positives = 72/175 (41%)
Query: 958 TFIPQAQAPPI----NVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPH 1013
T P+ P I +++ D R+ E + + ++ L+ + N +P
Sbjct: 2018 TISPKVARPFIEALNSIEQEDEELDDRVQEIRPESSIEPLVSELCESKYN---EEPSPLQ 2074
Query: 1014 QLIQEIDSELPVAKPALQLTYQIFGSCPPMQS-FDPAKLLTDSGKLQTLDILLKRLRAEN 1072
+L+ +D P+ K AL S + + +L T + K+ + L + L+ E
Sbjct: 2075 ELVAVVDQLTPIEKYALNYLELFHVSVDENEPRLNEVELKT-AKKVWEVQHL-RELK-EK 2131
Query: 1073 HRVLLFAQMTKMLNIL-EDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFV 1126
+ +L+ ++L ED N ++Y Y DG + IM Q +DI++
Sbjct: 2132 EQKMLWEDEEELLTYTREDAYN-KEYVYEGPDGQTEIMPLWTPPTPPQDDNDIYI 2185
Score = 44 (20.5 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1023 LPVAKPALQLTYQIFGSCPPMQSFDPAKL 1051
LP K +L +I+ S PP +P KL
Sbjct: 1430 LPKQKVTRKLIEEIYSSPPPPARPNPVKL 1458
Score = 41 (19.5 bits), Expect = 4.6e-65, Sum P(4) = 4.6e-65
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 118 SNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILSEGGI 154
+N PQ + + + + S P+ + IQ+ I+S +
Sbjct: 30 ANLPQSPAASFAPSASPSAPQSPSYQIQQFIMSRSPV 66
Score = 41 (19.5 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 378 QKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSL 437
++M+ F E L+E D +L +VA + + NP P S ++FK SL
Sbjct: 1735 REMIQTLF-REQESLKEVVDRALFVLPAAVAAPPCLYVANPP--PSYS--HRLKVFKHSL 1789
Query: 438 KE 439
K+
Sbjct: 1790 KQ 1791
Score = 38 (18.4 bits), Expect = 4.6e-65, Sum P(4) = 4.6e-65
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 309 IQQTELYSHFMQNKSSSQPSEVLPVGNDKPN 339
IQ T +Q++S +QPS V PV PN
Sbjct: 120 IQVTSPLPQQVQSQSPTQPSPV-PV-QTLPN 148
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 530 (191.6 bits), Expect = 5.2e-65, Sum P(4) = 5.2e-65
Identities = 115/299 (38%), Positives = 173/299 (57%)
Query: 402 MLDVS-VAGSGNIDLHNPSTMPVTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNG 458
M D+S VA + + L S+ +T+ V+ TP L G L+EYQ GL WL Y + LNG
Sbjct: 1054 MRDISEVAAAAEVLLPKGSSR-ITTAVKYNTPSLLYGPLREYQKIGLDWLAKLYRKNLNG 1112
Query: 459 ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYW 518
ILADE GLGKT+Q +AF AHLA + WGP LVV + + W E+ R+CP LK L Y+
Sbjct: 1113 ILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILLYF 1172
Query: 519 GGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKS 578
G +E R+ + F++ ITSY+ L F +++W+Y+++DE Q IK+
Sbjct: 1173 GSQRELRAKRQE------WSEPNSFNVCITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKN 1226
Query: 579 SNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIES 638
W+ L S ++RLLL TP+ N + ELW ++HF++P + + F +++
Sbjct: 1227 MTEKHWEALFSLRSQHRLLLIDTPLHNTLMELWTMVHFLIPGISRPYLDFP------VKA 1280
Query: 639 HAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
E + RLH +++PF+LRR K+DV +LT K E ++ C+LSSRQ+A Y+ +
Sbjct: 1281 PNEENQDYCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDV 1339
Score = 333 (122.3 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 81/260 (31%), Positives = 142/260 (54%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW + R C LK L W GL+ + ++ + KR + F++ ITSY
Sbjct: 1139 NWGPHLVVVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSY 1198
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ L F +++W+Y+++DE Q IK+ W+ L S ++RLLL TP+ N + EL
Sbjct: 1199 KQLFKGHPAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSLRSQHRLLLIDTPLHNTLMEL 1258
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ E + RLH +++PF+LRR K+DV
Sbjct: 1259 WTMVHFLIPGISRPYLDFP------VKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDV 1312
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LSSRQ+A Y+ + I G + + GH ++++++++QL
Sbjct: 1313 EKQLTKKYEHVLKCRLSSRQKAMYEDV---ILQPGTQEALKSGHF-----ISVLHVLMQL 1364
Query: 730 RKVCNHPELFE-RNEGSSYL 748
+++CNHP+L R +SY+
Sbjct: 1365 QRICNHPDLINPRLSSTSYV 1384
Score = 260 (96.6 bits), Expect = 5.2e-65, Sum P(4) = 5.2e-65
Identities = 54/150 (36%), Positives = 92/150 (61%)
Query: 1026 AKPALQLTYQIFGSCPPMQSFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKM 1084
A P L +I + P + F +L+ DSGKL+ L +LL +L++E RVL+ +QM M
Sbjct: 1872 AAPHLHQLRRI--TTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILM 1929
Query: 1085 LNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAAD 1144
L+ILE ++N+ ++R+D + R+++++ F IF +LS+ + G+NL AD
Sbjct: 1930 LDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLVEAD 1989
Query: 1145 TVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
TV+FY++D NP +D +A + R+G+ KD+
Sbjct: 1990 TVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 2019
Score = 55 (24.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 975 RNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTY 1034
R+FT EEQ + FA ++ P+ P +Q+ Q I S PVA + +T
Sbjct: 18 RSFTGSEGEEQQANLPQSPAASFAPSASPSAPQSPS--YQIQQFIMSRSPVAGQNVNITL 75
Query: 1035 QIFG 1038
Q G
Sbjct: 76 QNVG 79
Score = 48 (22.0 bits), Expect = 5.3e-43, Sum P(4) = 5.3e-43
Identities = 37/175 (21%), Positives = 72/175 (41%)
Query: 958 TFIPQAQAPPI----NVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPH 1013
T P+ P I +++ D R+ E + + ++ L+ + N +P
Sbjct: 2097 TISPKVARPFIEALNSIEQEDEELDDRVQEIRPESSIEPLVSELCESKYN---EEPSPLQ 2153
Query: 1014 QLIQEIDSELPVAKPALQLTYQIFGSCPPMQS-FDPAKLLTDSGKLQTLDILLKRLRAEN 1072
+L+ +D P+ K AL S + + +L T + K+ + L + L+ E
Sbjct: 2154 ELVAVVDQLTPIEKYALNYLELFHVSVDENEPRLNEVELKT-AKKVWEVQHL-RELK-EK 2210
Query: 1073 HRVLLFAQMTKMLNIL-EDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFV 1126
+ +L+ ++L ED N ++Y Y DG + IM Q +DI++
Sbjct: 2211 EQKMLWEDEEELLTYTREDAYN-KEYVYEGPDGQTEIMPLWTPPTPPQDDNDIYI 2264
Score = 44 (20.5 bits), Expect = 1.4e-42, Sum P(4) = 1.4e-42
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1023 LPVAKPALQLTYQIFGSCPPMQSFDPAKL 1051
LP K +L +I+ S PP +P KL
Sbjct: 1430 LPKQKVTRKLIEEIYSSPPPPARPNPVKL 1458
Score = 41 (19.5 bits), Expect = 5.2e-65, Sum P(4) = 5.2e-65
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 118 SNSPQKFSLKVSDTGNSSIPEGAAGSIQRSILSEGGI 154
+N PQ + + + + S P+ + IQ+ I+S +
Sbjct: 30 ANLPQSPAASFAPSASPSAPQSPSYQIQQFIMSRSPV 66
Score = 41 (19.5 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 378 QKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSL 437
++M+ F E L+E D +L +VA + + NP P S ++FK SL
Sbjct: 1814 REMIQTLF-REQESLKEVVDRALFVLPAAVAAPPCLYVANPP--PSYS--HRLKVFKHSL 1868
Query: 438 KE 439
K+
Sbjct: 1869 KQ 1870
Score = 38 (18.4 bits), Expect = 5.2e-65, Sum P(4) = 5.2e-65
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 309 IQQTELYSHFMQNKSSSQPSEVLPVGNDKPN 339
IQ T +Q++S +QPS V PV PN
Sbjct: 120 IQVTSPLPQQVQSQSPTQPSPV-PV-QTLPN 148
Score = 38 (18.4 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 127 KVSDTGNSSIPEGAAGSIQRSILSEGGILQVYYVKVLEKGETYEIIERA 175
+ S G + P+ +IQ+S+L + +L L GE +I + A
Sbjct: 1559 QASQLGQAQ-PQPPPHTIQQSVLPQRLVLTSQAQARLPSGEVVKIAQLA 1606
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 426 (155.0 bits), Expect = 2.4e-64, Sum P(2) = 2.4e-64
Identities = 105/284 (36%), Positives = 164/284 (57%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 478 LRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + P + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 593
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ + I ELW LL
Sbjct: 594 KDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDSDTAPSCTIPQ---ELW-LL 649
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 650 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 698
Query: 675 TTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLN 715
K E ++ ++S+ Q+ +Y+ I +N +L+ G ++ G LN
Sbjct: 699 PAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLN 742
Score = 329 (120.9 bits), Expect = 2.4e-64, Sum P(2) = 2.4e-64
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 775 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 834
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 835 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 894
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 895 QKKQVN 900
Score = 148 (57.2 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E+ LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 655 EKFSSW-----EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 709
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 710 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDDN 763
Query: 746 SY 747
+
Sbjct: 764 EF 765
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 622 (224.0 bits), Expect = 2.5e-64, Sum P(2) = 2.5e-64
Identities = 131/328 (39%), Positives = 202/328 (61%)
Query: 419 STMPVTSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
+T T ++P K G L++YQ++GL WL++ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 146 TTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 205
Query: 478 HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLY 537
++ +NI GP +V+ P S L+NW +E R+ P L+ + G +R +++ L
Sbjct: 206 YMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDV----LL 261
Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
+ + + +TSY++L+ ++ F++ W+Y+V+DEA IK+ S + + F NRLL
Sbjct: 262 PGE--WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLL 319
Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL-NRLHA 656
LTGTP+QNN+ ELWALL+F++P +F+S E F+ WF + L + +L RLH
Sbjct: 320 LTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF--------DTNNCLGDQKLVERLHM 371
Query: 657 ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNK-ISLAGLFDNSRGHLN 715
+L+PF+LRR+K DV L K EV ++ LS Q+ +Y I K I + NS G L+
Sbjct: 372 VLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL----NSAGKLD 427
Query: 716 EKKILNLMNIVIQLRKVCNHPELFERNE 743
+ + L+NI++QLRK CNHP LF+ E
Sbjct: 428 K---MRLLNILMQLRKCCNHPYLFDGAE 452
Score = 69 (29.3 bits), Expect = 2.5e-64, Sum P(2) = 2.5e-64
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 304 RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKP 338
R +L++QTEL++HF+Q + P+ L + +P
Sbjct: 76 RFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRP 110
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 423 (154.0 bits), Expect = 5.1e-64, Sum P(2) = 5.1e-64
Identities = 104/284 (36%), Positives = 164/284 (57%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 478 LRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + P + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 593
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ + I ELW+L
Sbjct: 594 KDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDSDTAPSCTIPQ---ELWSL- 649
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E+ LH L+PF+LRRVKKDV L
Sbjct: 650 HFIMPEKFSSWEDFEE----------EHGKG-REYGYASLHKELEPFLLRRVKKDVEKSL 698
Query: 675 TTKTEVMVHCKLSSRQQAFYQAI--KNKISLA-GLFDNSRGHLN 715
K E ++ ++S+ Q+ +Y+ I +N +L+ G ++ G LN
Sbjct: 699 PAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLN 742
Score = 329 (120.9 bits), Expect = 5.1e-64, Sum P(2) = 5.1e-64
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 775 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 834
Query: 1111 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ + F S+ F FLLSTRAGGLGINL +ADTV+ ++SDWNP DLQA RAHR+G
Sbjct: 835 RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG 894
Query: 1170 QTKDVS 1175
Q K V+
Sbjct: 895 QKKQVN 900
Score = 149 (57.5 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 621 LFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEV 680
L+ H E FS + EHG E+ LH L+PF+LRRVKKDV L K E
Sbjct: 646 LWSLHFIMPEKFSSWEDFEEEHGKG-REYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 704
Query: 681 MVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
++ ++S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L +
Sbjct: 705 ILRMEMSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIK 758
Query: 741 RNEGSSY 747
+ + +
Sbjct: 759 PPDDNEF 765
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 529 (191.3 bits), Expect = 5.2e-64, Sum P(2) = 5.2e-64
Identities = 127/338 (37%), Positives = 193/338 (57%)
Query: 418 PSTMPVTSTVQTPELFK---GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
P+ P + PE G+L YQL+GL WL + QG + ILADEMGLGKT+Q
Sbjct: 674 PTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAV 733
Query: 475 FLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNI--- 531
FL L +E + GPFLV AP S + NW E + PD+ + Y G R ++R+N
Sbjct: 734 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTF 793
Query: 532 --NP----KRLYR--RDAG--FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNS 581
N K+ R ++A FH+L+TSY+L+ D + W +++DEA +K++ S
Sbjct: 794 EDNAIRGGKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQS 853
Query: 582 IRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAE 641
++ L ++ +++LLLTGTP+QNN+ EL+ LL+F+ P F + E F E F+
Sbjct: 854 KFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFAD------- 906
Query: 642 HGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI 701
E Q+ +LH +L P MLRR+K DV + +KTE++V +LS Q+ +Y+ I +
Sbjct: 907 ---IAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR- 962
Query: 702 SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
+ L N+RG N+ ++L+N+V+ L+K CNHP LF
Sbjct: 963 NFEAL--NARGGGNQ---VSLLNVVMDLKKCCNHPYLF 995
Score = 220 (82.5 bits), Expect = 5.2e-64, Sum P(2) = 5.2e-64
Identities = 55/137 (40%), Positives = 81/137 (59%)
Query: 1042 PMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLR 1101
P +D + L+ SGKL L +LK L+ HRVL+F+QMTKML++LED++ + Y+Y R
Sbjct: 1006 PNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYER 1065
Query: 1102 LDGSSTIMDRRDMVRDFQHR-SDIFVFLLSTRAGG--LGINLTAADTVIFYESDWNPTLD 1158
+DG T R++ + F + F FLLSTRAGG L L +++ + +S +
Sbjct: 1066 IDGGITGNMRQEAIDRFNAPGAQGFCFLLSTRAGGPCLWSPLRSSERNV--DSSLSRKTM 1123
Query: 1159 LQAMDRAHRLGQTKDVS 1175
+ RAHRLGQ K V+
Sbjct: 1124 QKTYSRAHRLGQNKKVN 1140
Score = 60 (26.2 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 939 VVSHQERLLSNIKLLNATYTFIPQ--AQAPPINV--QCSDRNFTYRMTEEQHDP 988
V+ E LLS++K A T +P A+ PP+ V Q S+RN R+ +P
Sbjct: 1832 VLKQLEELLSDMK---ADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEP 1882
Score = 44 (20.5 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 978 TYRMTEEQHDPWLKRLLI--GFAR 999
TY + +HD WL +I G+AR
Sbjct: 1704 TYEIWHRRHDYWLLAGIINHGYAR 1727
Score = 39 (18.8 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 518 WGGLQERMVLRKNINPK 534
+GG +E+ RKN +PK
Sbjct: 558 FGGEEEKSRKRKNKDPK 574
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/64 (28%), Positives = 24/64 (37%)
Query: 15 RPTNYHETEFTPKVMYEPAYLDIGEGITYRIPLSYDKLAPSLNLPSFSDIQVEEFYLKGT 74
RP + T K +P YLD+ G + L LN FS Q + L
Sbjct: 669 RPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLE------GLNWLRFSWAQGTDTILADE 722
Query: 75 LDLG 78
+ LG
Sbjct: 723 MGLG 726
>UNIPROTKB|I3L7Y4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:CU469318 EMBL:CU469455
Ensembl:ENSSSCT00000027939 Uniprot:I3L7Y4
Length = 2789
Score = 486 (176.1 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 100/268 (37%), Positives = 150/268 (55%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
P L G+L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA + WGP
Sbjct: 1074 PALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPH 1133
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
LV+ + + W E+ R+CP LKTL Y G +E R+ + F+I ITS
Sbjct: 1134 LVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQE------WSEPNSFNICITS 1187
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
Y+ F R +W+ +V+DE Q +K W+ + + + RLLL P+ N E
Sbjct: 1188 YKQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLE 1247
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKD 669
LW ++HF++P + + F +++ +E + RLH + +PF+LRR K+D
Sbjct: 1248 LWTMVHFLIPGISRPYLHFP------LKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRD 1301
Query: 670 VISELTTKTEVMVHCKLSSRQQAFYQAI 697
V +LT K E ++ C+LS+RQ+A Y+ +
Sbjct: 1302 VEKQLTKKYEHVLKCRLSNRQKALYEDV 1329
Score = 310 (114.2 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 97/331 (29%), Positives = 164/331 (49%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW I R C LK L W GL+ + + + + KR + F+I ITSY
Sbjct: 1129 NWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEPNSFNICITSY 1188
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ F R +W+ +V+DE Q +K W+ + + + RLLL P+ N EL
Sbjct: 1189 KQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLEL 1248
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ +E + RLH + +PF+LRR K+DV
Sbjct: 1249 WTMVHFLIPGISRPYLHFP------LKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRDV 1302
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LS+RQ+A Y+ + I G + + GH +++++I+++L
Sbjct: 1303 EKQLTKKYEHVLKCRLSNRQKALYEDV---ILQPGTQEALKSGHF-----VDVLSILLRL 1354
Query: 730 RKVCNHPELFE-RNEGSSY----LYFGEIPNSL--LPPPFGELEDISFSGVRNPIEYKIP 782
+++CNHP L E R SSY L + L L F + D+S + +E K+
Sbjct: 1355 QRICNHPGLVEPRLPESSYTAGPLQYRSASLILKALDRDFWKETDLSIFDLIG-LENKM- 1412
Query: 783 KIVHQEILQSSEILCSAVGHGISRELFQKRF 813
H E +E+LC ++R+LF++ F
Sbjct: 1413 --THHE----AELLCKKK---VTRKLFEELF 1434
Score = 265 (98.3 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 50/121 (41%), Positives = 81/121 (66%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L +LL++LR+E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1809 DSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQE 1868
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF LLST + G++L AD V+FY++D NP +D +A + R+G+ +D
Sbjct: 1869 LMRSFNRDRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 1928
Query: 1174 V 1174
V
Sbjct: 1929 V 1929
Score = 48 (22.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 997 FARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFG 1038
FA ++ P+ PG P +Q++ S PVA + + Q G
Sbjct: 42 FAPSASPSAPQSPGYP---VQQLMSRSPVAGQNVNIALQNVG 80
Score = 46 (21.3 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDP 1048
P++P P Q S+ P PA+Q Q + PP Q P
Sbjct: 2462 PQQPPPPLPQPQATSSQQPTGPPAVQPQAQ---AQPPAQPTQP 2501
>UNIPROTKB|F1MLB1 [details] [associations]
symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
Uniprot:F1MLB1
Length = 3137
Score = 486 (176.1 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 101/271 (37%), Positives = 151/271 (55%)
Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
+ P L G+L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA + W
Sbjct: 1079 LNAPALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNW 1138
Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
GP LV+ + + W E+ R+CP LKTL Y G +E R+ + F+I
Sbjct: 1139 GPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQE------WTEPNSFNIC 1192
Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
ITSY+ F RV+W+ +V+DE Q +K W+ + + + RLLL P+ N
Sbjct: 1193 ITSYKQFFKGFASFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDAPLHNT 1252
Query: 607 MAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRV 666
ELW ++HF++P + + F +++ E + RLH + +PF+LRR
Sbjct: 1253 FLELWTMVHFLIPGISRPYLHFP------LKAPNEENQDYYHKVVIRLHRVTQPFILRRT 1306
Query: 667 KKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
K+DV +LT K E ++ C+LS+RQ+A Y+ +
Sbjct: 1307 KRDVEKQLTKKYEHVLKCRLSNRQKALYEDV 1337
Score = 301 (111.0 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 80/259 (30%), Positives = 133/259 (51%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW I R C LK L W GL+ + + + + KR + F+I ITSY
Sbjct: 1137 NWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEPNSFNICITSY 1196
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ F RV+W+ +V+DE Q +K W+ + + + RLLL P+ N EL
Sbjct: 1197 KQFFKGFASFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDAPLHNTFLEL 1256
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ E + RLH + +PF+LRR K+DV
Sbjct: 1257 WTMVHFLIPGISRPYLHFP------LKAPNEENQDYYHKVVIRLHRVTQPFILRRTKRDV 1310
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LS+RQ+A Y+ + I G + + GH +++++I+++L
Sbjct: 1311 EKQLTKKYEHVLKCRLSNRQKALYEDV---ILQPGTQEALKSGHF-----VDVLSILLRL 1362
Query: 730 RKVCNHPELFE-RNEGSSY 747
+++CNHP L R SSY
Sbjct: 1363 QRICNHPGLVAPRLPESSY 1381
Score = 266 (98.7 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 51/121 (42%), Positives = 80/121 (66%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L ILL++L++E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1895 DSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQE 1954
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF LLST + G++L AD V+FY+ D NP +D +A + R+G+ KD
Sbjct: 1955 LMRSFNRDRRIFCALLSTHSRATGVSLVEADAVVFYDHDLNPVMDAKAQEWCDRIGRRKD 2014
Query: 1174 V 1174
V
Sbjct: 2015 V 2015
Score = 39 (18.8 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDP 1048
P++P P S+ P PA+Q Q + PP Q P
Sbjct: 2551 PQQPPPPLPQPSAAGSQQPAGPPAVQPQAQ---AQPPAQPAPP 2590
Score = 38 (18.4 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 590 FNCRNRLLLTGTPIQNNMAELWALLHFIMP 619
F R+++ G P ++AE+ A+ I+P
Sbjct: 1039 FKAAERVIV-GKPHTRDIAEVTAVAEAILP 1067
Score = 38 (18.4 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 92 PRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGNSSIPEG 139
P S G +P+PQ S A AL PQ L ++ + +P G
Sbjct: 1559 PASAPGPPQPQPQAPSHPAGQSAL-----PQ--GLVLTSQAQARLPSG 1599
Score = 37 (18.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 1004 IGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFG 1038
+ P P P + ++ + PVA + + Q G
Sbjct: 45 VSPSAPQSPGYQVSQLMNRSPVAGQNVNIALQNVG 79
>UNIPROTKB|I3LPX4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:CU469318
EMBL:CU469455 Ensembl:ENSSSCT00000024610 Uniprot:I3LPX4
Length = 2865
Score = 486 (176.1 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 100/268 (37%), Positives = 150/268 (55%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
P L G+L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA + WGP
Sbjct: 1077 PALLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPH 1136
Query: 490 LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
LV+ + + W E+ R+CP LKTL Y G +E R+ + F+I ITS
Sbjct: 1137 LVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQE------WSEPNSFNICITS 1190
Query: 550 YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
Y+ F R +W+ +V+DE Q +K W+ + + + RLLL P+ N E
Sbjct: 1191 YKQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLE 1250
Query: 610 LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKD 669
LW ++HF++P + + F +++ +E + RLH + +PF+LRR K+D
Sbjct: 1251 LWTMVHFLIPGISRPYLHFP------LKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRD 1304
Query: 670 VISELTTKTEVMVHCKLSSRQQAFYQAI 697
V +LT K E ++ C+LS+RQ+A Y+ +
Sbjct: 1305 VEKQLTKKYEHVLKCRLSNRQKALYEDV 1332
Score = 310 (114.2 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 97/331 (29%), Positives = 164/331 (49%)
Query: 500 NWADE--ISRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSY 550
NW I R C LK L W GL+ + + + + KR + F+I ITSY
Sbjct: 1132 NWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEPNSFNICITSY 1191
Query: 551 QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+ F R +W+ +V+DE Q +K W+ + + + RLLL P+ N EL
Sbjct: 1192 KQFFRGHASFPRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLEL 1251
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
W ++HF++P + + F +++ +E + RLH + +PF+LRR K+DV
Sbjct: 1252 WTMVHFLIPGISRPYLHFP------LKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRDV 1305
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQL 729
+LT K E ++ C+LS+RQ+A Y+ + I G + + GH +++++I+++L
Sbjct: 1306 EKQLTKKYEHVLKCRLSNRQKALYEDV---ILQPGTQEALKSGHF-----VDVLSILLRL 1357
Query: 730 RKVCNHPELFE-RNEGSSY----LYFGEIPNSL--LPPPFGELEDISFSGVRNPIEYKIP 782
+++CNHP L E R SSY L + L L F + D+S + +E K+
Sbjct: 1358 QRICNHPGLVEPRLPESSYTAGPLQYRSASLILKALDRDFWKETDLSIFDLIG-LENKM- 1415
Query: 783 KIVHQEILQSSEILCSAVGHGISRELFQKRF 813
H E +E+LC ++R+LF++ F
Sbjct: 1416 --THHE----AELLCKKK---VTRKLFEELF 1437
Score = 265 (98.3 bits), Expect = 1.5e-63, Sum P(2) = 1.5e-63
Identities = 50/121 (41%), Positives = 81/121 (66%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L +LL++LR+E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1885 DSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQE 1944
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF LLST + G++L AD V+FY++D NP +D +A + R+G+ +D
Sbjct: 1945 LMRSFNRDRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 2004
Query: 1174 V 1174
V
Sbjct: 2005 V 2005
Score = 48 (22.0 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 997 FARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFG 1038
FA ++ P+ PG P +Q++ S PVA + + Q G
Sbjct: 42 FAPSASPSAPQSPGYP---VQQLMSRSPVAGQNVNIALQNVG 80
Score = 46 (21.3 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDP 1048
P++P P Q S+ P PA+Q Q + PP Q P
Sbjct: 2538 PQQPPPPLPQPQATSSQQPTGPPAVQPQAQ---AQPPAQPTQP 2577
>UNIPROTKB|E2QWV6 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AAEX03014584 EMBL:AAEX03014585
EMBL:AAEX03014586 Ensembl:ENSCAFT00000010370 Uniprot:E2QWV6
Length = 3002
Score = 469 (170.2 bits), Expect = 7.1e-62, Sum P(2) = 7.1e-62
Identities = 100/277 (36%), Positives = 150/277 (54%)
Query: 423 VTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
V+ TV+ P L G L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA
Sbjct: 1032 VSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLA 1091
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
+ WGP LVV + W E+ R+CP LKTL Y G +E R+ +
Sbjct: 1092 CNEGNWGPHLVVVRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQE------WTEP 1145
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
F++ I Y+ F RV+W+ +V+DE Q ++ W+ + + + RLLL
Sbjct: 1146 NSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLID 1205
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
P+ N ELW ++HF++P + + +++ + + RLH + +P
Sbjct: 1206 APLHNTFLELWTMVHFLIPGIS------RPYLHLPLKAPNDENQDYYHKVVIRLHRVTQP 1259
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
F+LRR K+DV +LT K E ++ C+LSSRQ+A Y+ +
Sbjct: 1260 FILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYEDV 1296
Score = 291 (107.5 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 86/311 (27%), Positives = 151/311 (48%)
Query: 456 LNGILADEMGLGKTIQAMAFLAHL----AEEKNIWGPFLVVAPASVL----NNWADE--I 505
L G+L D +G A + +L A+E + ++A + L NW +
Sbjct: 1044 LYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVV 1103
Query: 506 SRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSYQLLVADEK 558
R C LK L W GL+ + + + + KR + F++ I Y+
Sbjct: 1104 VRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEPNSFNVCIAPYKQFFRGYA 1163
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
F RV+W+ +V+DE Q ++ W+ + + + RLLL P+ N ELW ++HF++
Sbjct: 1164 SFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLIDAPLHNTFLELWTMVHFLI 1223
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P + + +++ + + RLH + +PF+LRR K+DV +LT K
Sbjct: 1224 PGIS------RPYLHLPLKAPNDENQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKY 1277
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQLRKVCNHPE 737
E ++ C+LSSRQ+A Y+ + I G + + GH +++++I+++L+++CNHP
Sbjct: 1278 EHVLKCRLSSRQKALYEDV---ILQPGTQEALKSGHF-----VDVLSILLRLQRICNHPG 1329
Query: 738 LFE-RNEGSSY 747
L E R SSY
Sbjct: 1330 LVEPRLPESSY 1340
Score = 267 (99.0 bits), Expect = 7.1e-62, Sum P(2) = 7.1e-62
Identities = 50/121 (41%), Positives = 81/121 (66%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L ILL++L++E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1769 DSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQE 1828
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF +LST + G++L AD V+FY++D NP +D +A + R+G+ KD
Sbjct: 1829 LMRSFNRDRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1888
Query: 1174 V 1174
V
Sbjct: 1889 V 1889
Score = 43 (20.2 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQ 1044
P++P P Q S+ P PA+Q Q P Q
Sbjct: 2422 PQQPPPPLPQSQAAGSQQPAGPPAVQPQAQAQPQAQPTQ 2460
Score = 40 (19.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 975 RNFTYRMTEEQ--HDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQL 1032
R FT EEQ H + FA ++ P+ PG +Q +Q++ + PV + +
Sbjct: 18 RAFTSSEGEEQQAHPNPPQSPATPFAPSASPSAPQSPG--YQ-VQQLMNRSPVTGQNVNI 74
Query: 1033 TYQIFG 1038
Q G
Sbjct: 75 ALQSVG 80
Score = 37 (18.1 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 952 LLNATY--TFIPQAQAPPINVQ 971
+L TY T IP+++ PP+ V+
Sbjct: 2132 VLCLTYESTPIPESKLPPVYVR 2153
Score = 37 (18.1 bits), Expect = 5.1e-36, Sum P(3) = 5.1e-36
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKP 1028
P+ P GP Q ++ + P P
Sbjct: 2677 PQAPPGPPQPATQVQVQAPPPTP 2699
>UNIPROTKB|L7N089 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] GeneTree:ENSGT00530000063427 EMBL:AAEX03014584
Ensembl:ENSCAFT00000010365 Uniprot:L7N089
Length = 3110
Score = 469 (170.2 bits), Expect = 7.7e-62, Sum P(2) = 7.7e-62
Identities = 100/277 (36%), Positives = 150/277 (54%)
Query: 423 VTSTVQ--TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
V+ TV+ P L G L++YQ GL WL Y + LNGILADE GLGKT+Q +AF AHLA
Sbjct: 1068 VSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLA 1127
Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
+ WGP LVV + W E+ R+CP LKTL Y G +E R+ +
Sbjct: 1128 CNEGNWGPHLVVVRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQE------WTEP 1181
Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
F++ I Y+ F RV+W+ +V+DE Q ++ W+ + + + RLLL
Sbjct: 1182 NSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLID 1241
Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
P+ N ELW ++HF++P + + +++ + + RLH + +P
Sbjct: 1242 APLHNTFLELWTMVHFLIPGIS------RPYLHLPLKAPNDENQDYYHKVVIRLHRVTQP 1295
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
F+LRR K+DV +LT K E ++ C+LSSRQ+A Y+ +
Sbjct: 1296 FILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYEDV 1332
Score = 291 (107.5 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 86/311 (27%), Positives = 151/311 (48%)
Query: 456 LNGILADEMGLGKTIQAMAFLAHL----AEEKNIWGPFLVVAPASVL----NNWADE--I 505
L G+L D +G A + +L A+E + ++A + L NW +
Sbjct: 1080 LYGVLRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVV 1139
Query: 506 SRFCPDLK---TLPYW-GGLQERMVL--RKNINPKRL-YRRDAGFHILITSYQLLVADEK 558
R C LK L W GL+ + + + + KR + F++ I Y+
Sbjct: 1140 VRGCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWTEPNSFNVCIAPYKQFFRGYA 1199
Query: 559 YFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIM 618
F RV+W+ +V+DE Q ++ W+ + + + RLLL P+ N ELW ++HF++
Sbjct: 1200 SFMRVRWRCLVIDEMQRVRGMTERHWEAVFTLRSQQRLLLIDAPLHNTFLELWTMVHFLI 1259
Query: 619 PTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKT 678
P + + +++ + + RLH + +PF+LRR K+DV +LT K
Sbjct: 1260 PGIS------RPYLHLPLKAPNDENQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKY 1313
Query: 679 EVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNEKKILNLMNIVIQLRKVCNHPE 737
E ++ C+LSSRQ+A Y+ + I G + + GH +++++I+++L+++CNHP
Sbjct: 1314 EHVLKCRLSSRQKALYEDV---ILQPGTQEALKSGHF-----VDVLSILLRLQRICNHPG 1365
Query: 738 LFE-RNEGSSY 747
L E R SSY
Sbjct: 1366 LVEPRLPESSY 1376
Score = 267 (99.0 bits), Expect = 7.7e-62, Sum P(2) = 7.7e-62
Identities = 50/121 (41%), Positives = 81/121 (66%)
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
DSGKL+ L ILL++L++E RVL+ +QM ML+ILE ++N+ Y+R+D ++ R++
Sbjct: 1878 DSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQE 1937
Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
++R F IF +LST + G++L AD V+FY++D NP +D +A + R+G+ KD
Sbjct: 1938 LMRSFNRDRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1997
Query: 1174 V 1174
V
Sbjct: 1998 V 1998
Score = 43 (20.2 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQ 1044
P++P P Q S+ P PA+Q Q P Q
Sbjct: 2531 PQQPPPPLPQSQAAGSQQPAGPPAVQPQAQAQPQAQPTQ 2569
Score = 40 (19.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 975 RNFTYRMTEEQ--HDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQL 1032
R FT EEQ H + FA ++ P+ PG +Q +Q++ + PV + +
Sbjct: 18 RAFTSSEGEEQQAHPNPPQSPATPFAPSASPSAPQSPG--YQ-VQQLMNRSPVTGQNVNI 74
Query: 1033 TYQIFG 1038
Q G
Sbjct: 75 ALQSVG 80
Score = 37 (18.1 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 952 LLNATY--TFIPQAQAPPINVQ 971
+L TY T IP+++ PP+ V+
Sbjct: 2241 VLCLTYESTPIPESKLPPVYVR 2262
Score = 37 (18.1 bits), Expect = 5.8e-36, Sum P(3) = 5.8e-36
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 1006 PRKPGGPHQLIQEIDSELPVAKP 1028
P+ P GP Q ++ + P P
Sbjct: 2785 PQAPPGPPQPATQVQVQAPPPTP 2807
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 442 (160.7 bits), Expect = 9.0e-62, Sum P(3) = 9.0e-62
Identities = 109/315 (34%), Positives = 168/315 (53%)
Query: 435 GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
G + +YQ GL WL + + N ILADEMGLGKTIQ + LA L ++ W PFL+V P
Sbjct: 604 GEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHKCW-PFLIVVP 662
Query: 495 ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGF--HILITSYQL 552
S NW E+ + P L+ + Y+G R + +++ + R D H++ITSY+
Sbjct: 663 NSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEH---EMFIRGDPDLRCHVVITSYET 719
Query: 553 LVADE--KYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
+V D K R+ W +++DE Q +KS S ++ L ++L+TGTP+QNN EL
Sbjct: 720 MVDDSCRKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGTPLQNNTKEL 779
Query: 611 WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
+ LL F +Q SK E E GTL++ + LH +++PF LRR K V
Sbjct: 780 FNLLQFC--------DQ-----SKNAEELEEKYGTLSKENIPELHELIRPFFLRRTKAQV 826
Query: 671 ISELTTKTEVMVHCKLSSRQQAFYQAI--KNKISLAGLFDNSRGH--LNEKKILNLMNIV 726
++ L +++V +S Q+ Y++I KN + +F + L + + NL NI+
Sbjct: 827 LTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQPLKQTERHNLNNIL 886
Query: 727 IQLRKVCNHPELFER 741
+QLRK HP +F +
Sbjct: 887 MQLRKCLCHPFIFSK 901
Score = 293 (108.2 bits), Expect = 9.0e-62, Sum P(3) = 9.0e-62
Identities = 57/125 (45%), Positives = 87/125 (69%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ +GKLQ L+++L +L+A HRVL+F+Q + L+++ED+++ + RLDG T ++
Sbjct: 917 LVDAAGKLQLLELMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLE 976
Query: 1111 RRDMVRDFQ-HRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
++ M+ D+ S F FLLSTR+GG+GINL ADTVI + D+NP D+QA+ RAHR+G
Sbjct: 977 KQRMIDDYNAENSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIG 1036
Query: 1170 QTKDV 1174
Q V
Sbjct: 1037 QKNKV 1041
Score = 43 (20.2 bits), Expect = 9.0e-62, Sum P(3) = 9.0e-62
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 76 DLGSLAAMMANDKRF-GPRSRVGMGEPRPQYESL---------QARLKALVASNSPQKFS 125
D G L ++D+ PRSR + RP Y S +R +A S P +++
Sbjct: 152 DDGKLTKSDSSDEDVVAPRSRQSVLRKRPNYHSTLNNGFGANAHSRTRASTRSRKPLRYN 211
Query: 126 L 126
L
Sbjct: 212 L 212
Score = 39 (18.8 bits), Expect = 2.9e-35, Sum P(3) = 2.9e-35
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 884 DVFMEAMDGELNENHPDRGKVRAVTRLLLIPSRSET 919
D ME D + E + KV A R++L+P ++T
Sbjct: 1234 DYSMED-DISVYEGATIKPKVHAFQRVILLPQVAQT 1268
Score = 38 (18.4 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 1180 LCHLFIFS 1187
LCH FIFS
Sbjct: 893 LCHPFIFS 900
Score = 37 (18.1 bits), Expect = 5.6e-19, Sum P(3) = 5.6e-19
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 774 RNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQK 811
R P+ Y + ++ +I + +L + + ++E F K
Sbjct: 205 RKPLRYNLHEMYEDDISEYEAVLSNHRKYVGTKEKFDK 242
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 396 (144.5 bits), Expect = 3.4e-61, Sum P(3) = 3.4e-61
Identities = 99/286 (34%), Positives = 165/286 (57%)
Query: 429 TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
TPE KG L YQL+GL +L + + + ILADEMGLGKTIQ++A LA L EE N+
Sbjct: 265 TPEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEE-NLIPH 323
Query: 489 FLVVAPASVLN------NWADEIS--------RFCPDLKTLPYWGGLQERMVLRKN---I 531
++ +++ N WA +++ + ++ ++ ++ + +K I
Sbjct: 324 LVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQI 383
Query: 532 NPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFN 591
+ + +R F +L+TSY+++ D + +KW+ M++DE +K+ +S + +L ++
Sbjct: 384 SSESKQKR-IKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYS 442
Query: 592 CRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL 651
+R+LLTGTP+QNN+ EL+ L+HF+ F S E+F E F K I E Q+
Sbjct: 443 SNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQI 492
Query: 652 NRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAI 697
+RLH +L P +LRRVKKDV+ ++ K E+++ LSS Q+ +Y+AI
Sbjct: 493 SRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAI 538
Score = 341 (125.1 bits), Expect = 3.4e-61, Sum P(3) = 3.4e-61
Identities = 79/170 (46%), Positives = 104/170 (61%)
Query: 1008 KPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPA--KLLTDSGKLQTLDILL 1065
K GG + I EL K Y + G P + + A +LL GKLQ LD ++
Sbjct: 548 KKGGAQISLNNIMMEL--RKVCCH-PYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMM 604
Query: 1066 KRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHR-SDI 1124
+L+ + HRVL++ Q ML++LEDY ++K++Y R+DG +R+ + F + S+
Sbjct: 605 VKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNK 664
Query: 1125 FVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
F FLLSTRAGGLGINL ADTVI Y+SDWNP DLQAM RAHRLGQT V
Sbjct: 665 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 714
Score = 37 (18.1 bits), Expect = 3.4e-61, Sum P(3) = 3.4e-61
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 10 DISPRRPTNYHETEFTPKVMYEPAYLDIGEGITY 43
++ P + + ++ PK ++ YL +G++Y
Sbjct: 107 EMRPTKSSEQGSSDAEPKPIFVKQYLVKWKGLSY 140
>CGD|CAL0000882 [details] [associations]
symbol:orf19.607 species:5476 "Candida albicans" [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000882 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000108 HOGENOM:HOG000170952 KO:K10841
RefSeq:XP_714234.1 ProteinModelPortal:Q59XB8 STRING:Q59XB8
GeneID:3644142 KEGG:cal:CaO19.607 Uniprot:Q59XB8
Length = 1055
Score = 313 (115.2 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 66/135 (48%), Positives = 91/135 (67%)
Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYM------NYRKYRYL 1100
DPAK SGK+Q L LL+ ++ENH+ LLF Q +ML+ILE ++ N + YL
Sbjct: 608 DPAK----SGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYL 663
Query: 1101 RLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQ 1160
R+DGS+ I R+ +V F D+ VFLL+T+ GGLG+NLT AD VI Y+ DWNP+ D+Q
Sbjct: 664 RMDGSTPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQ 723
Query: 1161 AMDRAHRLGQTKDVS 1175
A +RA RLGQ +D++
Sbjct: 724 ARERAWRLGQKRDIT 738
Score = 270 (100.1 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 75/227 (33%), Positives = 115/227 (50%)
Query: 527 LRKNINPKRLYRR--DAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRW 584
++ IN + + R + G H+L+T+Y L K+ +W Y+VLDE I++ +S
Sbjct: 386 IKSQINAQEIVDRVMEKG-HVLVTTYVGLRIYSKHILPREWGYVVLDEGHKIRNPDSDIS 444
Query: 585 KTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGG 644
T NR++L+GTPIQNN+ ELW+L F+ P + F + FS I GG
Sbjct: 445 LTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINI----GG 500
Query: 645 TLNEHQLNR---------LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQ 695
N + L L ++ P+MLRR+K DV +L K E+++ KL+ QQ Y+
Sbjct: 501 YANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYE 560
Query: 696 AIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERN 742
+ L + +G N LM + I LRK+CNHP+L R+
Sbjct: 561 SFLQSEDLESIL---KGKRNV-----LMGVDI-LRKICNHPDLVYRD 598
Score = 182 (69.1 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 39/80 (48%), Positives = 50/80 (62%)
Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
SL +YQ +QWL Y Q GI+ DEMGLGKTIQ ++FLA L + P LVV PA
Sbjct: 270 SLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLDKPVLVVVPA 329
Query: 496 SVLNNWADEISRFCPDLKTL 515
+VLN W +E R+ P L+ +
Sbjct: 330 TVLNQWVNEFHRWWPPLRCI 349
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 451 (163.8 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 98/273 (35%), Positives = 158/273 (57%)
Query: 465 GLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQER 524
GLGKT+Q +A L +L +NI GP +V+ P S L NW +E R+ P L+ + + G R
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
Query: 525 MV-LRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIR 583
+R + P + + +TSY++++ ++ F++ W+Y+V+DEA IK+ S
Sbjct: 63 AAFIRDEMMPGE-------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 115
Query: 584 WKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHG 643
+ + F NRLLLTGTP+QNN+ ELWALL+F++P +F+S + F+ WF +
Sbjct: 116 SEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF--------DTK 167
Query: 644 GTLNEHQL-NRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS 702
L + +L RLHA+LKPF+LRR+K DV L K E+ V+ LS Q+ ++ +
Sbjct: 168 NCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWF------VI 221
Query: 703 LAGLFDNSRGHLNEKKILNLMNIVIQLR--KVC 733
LA + + N+ L+++N+++ LR K C
Sbjct: 222 LAFFISENSNNSNKNHKLDILNVIMLLREAKCC 254
Score = 243 (90.6 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 50/108 (46%), Positives = 67/108 (62%)
Query: 1068 LRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQH-RSDIFV 1126
LR ++ L L+ L DY ++ Y Y + G + +++ + F S F+
Sbjct: 290 LRQKSRCFLTSDSQFAFLSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNAPNSSKFI 349
Query: 1127 FLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
F+LSTRAGGLGINL +AD VI Y+SDWNP +DLQAMDRAHR+GQ K V
Sbjct: 350 FMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 397
Score = 38 (18.4 bits), Expect = 7.7e-38, Sum P(2) = 7.7e-38
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIPK 783
PP EL + R I YK+P+
Sbjct: 573 PPRLFELLEKEILYYRKTIGYKVPR 597
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 435 (158.2 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
Identities = 108/325 (33%), Positives = 168/325 (51%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA---HLAEE---- 482
P K +L++YQ G+ WL + L+GIL D+MGLGKT+Q + +A +L +E
Sbjct: 1265 PIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEK 1324
Query: 483 -KNIWG---PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYR 538
+++ P L++ P S+ +W +E ++ P LK + Y GG R+ LR ++
Sbjct: 1325 TRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRPQLS------ 1378
Query: 539 RDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLL 598
DA I++TSY + D + ++ Y VLDE IK+S S K + +RL+L
Sbjct: 1379 -DAD--IIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLIL 1435
Query: 599 TGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ-----LNR 653
TGTPIQNN+ ELW+L F+MP + + F E F+K I + + E + L
Sbjct: 1436 TGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEA 1495
Query: 654 LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGH 713
LH + PFMLRR+K+DV+S+L K +C+L Q+ Y K D
Sbjct: 1496 LHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSE 1555
Query: 714 LNEKKILNLMNIVIQLRKVCNHPEL 738
+ + K ++ + +RK+CNHP L
Sbjct: 1556 IADGK-QHIFQALQYMRKLCNHPAL 1579
Score = 273 (101.2 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
Identities = 57/107 (53%), Positives = 74/107 (69%)
Query: 1073 HRVLLFAQMTKMLNILEDYMNYRKYR----YLRLDGSSTIMDRRDMVRDFQHRSDIFVFL 1128
HR L+F Q+ ML+++E+ + ++KY Y+RLDGS DR+ +VR F I L
Sbjct: 1647 HRALIFCQLKDMLDMVENDL-FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLL 1705
Query: 1129 LSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
L+T+ GGLG+NLT ADTVIF E DWNP DLQAMDRAHR+GQ K V+
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVN 1752
Score = 45 (20.9 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 657 ILKP---FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGL 706
ILKP + L KK ISE TT +++ + K + I I+L GL
Sbjct: 661 ILKPSQHYQLHPEKKRSISETTTDSDIPIP-KNNEHINIDAPMIAGDITLLGL 712
Score = 45 (20.9 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 540 DAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
D F + SY+LL +K K + VL + K S +R ++L+ + LL
Sbjct: 871 DKMFKSMNNSYKLLA--KKPLEDSK--HRVLMAINSAKESAKLRTGSILANYASSILLFD 926
Query: 600 GTPIQNN 606
G P++ N
Sbjct: 927 GLPLKLN 933
Score = 40 (19.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 724 NIVIQLRKVCNHPELFERNEGSSYLYFGEIP-NSLLPPPFGELEDISFSGVRNPI 777
+I+ L K+C+H E+ + + + + E SL+P + L S S VR +
Sbjct: 512 SIMDLLAKLCDHQEVLDILKNKALEHPSEWSFKSLVPKLYPFLRH-SISSVRRAV 565
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 432 (157.1 bits), Expect = 4.6e-59, Sum P(3) = 4.6e-59
Identities = 111/334 (33%), Positives = 177/334 (52%)
Query: 430 PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA---HLAEE--KN 484
P K +L++YQ +G+ WL + L+GIL D+MGLGKT+Q + ++ H+ EE K
Sbjct: 1295 PVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREENFKE 1354
Query: 485 IWG------PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYR 538
P LV+ P S++ +W EI+++ P +K L Y G R+ LR I P
Sbjct: 1355 TGSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGSPSIRIPLRGQI-P----- 1408
Query: 539 RDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLL 598
DA +++TSY + D + + + Y VLDE IK+++S K++ +RL+L
Sbjct: 1409 -DAD--VVVTSYDVCRNDVESLTKHDYNYCVLDEGHIIKNASSKLSKSVKRVKAEHRLIL 1465
Query: 599 TGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ-----LNR 653
+GTPIQNN+ ELW+L F+MP + + F+E F+K I + + E + +
Sbjct: 1466 SGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAGALAMES 1525
Query: 654 LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGH 713
LH + PFMLRR+K+DV+S+L K +C+LS Q+ Y+ K + + +G
Sbjct: 1526 LHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFA-KTQKETIKTDVQGS 1584
Query: 714 LNEKKILNLMNIVIQLRKVCNHPELFERNEGSSY 747
E K ++ + +RK+CNHP L + Y
Sbjct: 1585 EKEGKT-HVFQALQYMRKLCNHPALVMSEQHPKY 1617
Score = 283 (104.7 bits), Expect = 4.6e-59, Sum P(3) = 4.6e-59
Identities = 60/107 (56%), Positives = 75/107 (70%)
Query: 1073 HRVLLFAQMTKMLNILEDYMNYRKY----RYLRLDGSSTIMDRRDMVRDFQHRSDIFVFL 1128
HR L+F Q+ ML+I+E+ + RKY ++RLDGS+ DR+ +VR F I V L
Sbjct: 1687 HRALIFCQLKDMLDIVENEL-LRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLL 1745
Query: 1129 LSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
L+T+ GGLG+NLT ADTVIF E DWNP DLQAMDRAHRLGQ K V+
Sbjct: 1746 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVN 1792
Score = 47 (21.6 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 640 AEHGGTLNEHQLNRLHA-IL--KPFMLRRVKKDVISELTTK---TEVMVHCKLSSRQQAF 693
A+HGG L L + IL P M V V+S L + + L+ F
Sbjct: 456 AKHGGILGVRYLVSVRTDILLANPEMFDDVVTMVLSGLKESDDDVQSVAALTLTPIASQF 515
Query: 694 YQAIKNKI-SLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
KN I +L + + +L + ++ +++ L K+C+H E+ E
Sbjct: 516 VTTRKNVIGTLLTVIWDCLVNLRDDLSASIGSVMDLLAKLCSHKEVIE 563
Score = 43 (20.2 bits), Expect = 4.6e-59, Sum P(3) = 4.6e-59
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 160 VKVLEKGETYEIIERALPXXXXXXXDPSVIEKEEMEKIGKVWVNI 204
V V E+ ET I+++ P D +I+KE+ E++ K+ N+
Sbjct: 91 VFVKEEIETDPIVKKEFPE------DEIIIKKEQDEELQKLTKNL 129
Score = 39 (18.8 bits), Expect = 9.4e-17, Sum P(4) = 9.4e-17
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 398 TEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLN 457
+E +L + A SG + + +++ +++ + E + +LKE LK + +V LN
Sbjct: 769 SEETLLKIFEAISGYLKSCHATSVLLSAFIV--EEYATALKERGLKPNEKIVTLLSGSLN 826
Query: 458 GILADEMGL 466
+L + L
Sbjct: 827 KVLQEPESL 835
Score = 38 (18.4 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1014 QLIQEIDSELPVAKPALQLTYQIF 1037
+L E+ L + P LQ Y +F
Sbjct: 1135 ELYPEVIDNLDLFLPGLQSEYSVF 1158
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 641 (230.7 bits), Expect = 5.4e-59, Sum P(3) = 5.4e-59
Identities = 131/321 (40%), Positives = 199/321 (61%)
Query: 428 QTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWG 487
++P +G++++YQ+ GL WL++ +E G++GILADEMGLGKT+Q ++FL +L I G
Sbjct: 177 ESPAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITG 236
Query: 488 PFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILI 547
P LV+ P S L+NW E ++ P++ L G +ER L +RL D F + I
Sbjct: 237 PHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIA----ERLV--DESFDVCI 290
Query: 548 TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
TSY++++ ++ + ++ W+Y+++DEA IK+ S + + FN RNRLL+TGTP+QNN+
Sbjct: 291 TSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNNI 350
Query: 608 AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
ELWALL+F++P +F E F++WFS + T+ + +LH +L+PF+LRRVK
Sbjct: 351 HELWALLNFLLPDVFGDSEAFDQWFS----GEGQDSDTV----VQQLHRVLRPFLLRRVK 402
Query: 668 KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
DV L K EV ++ K++ Q+ +YQ I K + + N E K L+NIV+
Sbjct: 403 ADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEK-DIDAV--NGANGKRESKT-RLLNIVM 458
Query: 728 QLRKVCNHPELFERNE-GSSY 747
QLRK CNHP LFE E G Y
Sbjct: 459 QLRKCCNHPYLFEGAEPGPPY 479
Score = 375 (137.1 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 100/248 (40%), Positives = 138/248 (55%)
Query: 929 GPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDP 988
G G D D VV R+L LL + ++ P V N +MTE Q
Sbjct: 377 GEGQD--SDTVVQQLHRVLRPF-LLRRVKADVEKSLLPKKEV-----NLYLKMTEMQRT- 427
Query: 989 WLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCP-PMQSFD 1047
W +++L ++ L I +L + Y G+ P P + D
Sbjct: 428 WYQKILEKDIDAVNGANGKRESKTRLL--NIVMQL---RKCCNHPYLFEGAEPGPPYTTD 482
Query: 1048 PAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSST 1107
L+ +SGK+ LD LLKRL+A+ RVL+F+QM+++L+ILEDY +R+Y+Y R+DG +
Sbjct: 483 E-HLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTA 541
Query: 1108 IMDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
DR + ++ S+ FVFLL+TRAGGLGINLT AD VI ++SDWNP DLQAMDRAH
Sbjct: 542 HEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAH 601
Query: 1167 RLGQTKDV 1174
R+GQTK V
Sbjct: 602 RIGQTKQV 609
Score = 45 (20.9 bits), Expect = 5.4e-59, Sum P(3) = 5.4e-59
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 759 PPPFGELEDISFSGVRNPIEYKIP 782
PP +L+D + R I YK+P
Sbjct: 797 PPELRDLQDRETAFYRKEIGYKVP 820
Score = 42 (19.8 bits), Expect = 5.4e-59, Sum P(3) = 5.4e-59
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 390 SKLREAADTEAAMLDVS 406
S+ AADT+A+M+D +
Sbjct: 5 SRASAAADTDASMVDAA 21
Score = 41 (19.5 bits), Expect = 6.9e-59, Sum P(3) = 6.9e-59
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 303 QRLNFLIQQTELYSHFMQ 320
+R +L+ T+L+ HF++
Sbjct: 94 RRFRYLLGLTDLFRHFIE 111
Score = 37 (18.1 bits), Expect = 3.7e-58, Sum P(3) = 3.7e-58
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 987 DPWLKRLLIGFARTSENIGPRKPGGPHQL-IQE 1018
D + ++ + G + + P+ P P Q+ IQ+
Sbjct: 760 DKYYRQAIYGHTGQPKEVKPKAPRPPKQVHIQD 792
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 408 (148.7 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 114/349 (32%), Positives = 183/349 (52%)
Query: 399 EAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKG-SLKEYQLKGLQWLVNCYEQGLN 457
E ++ + S NIDL P T P KG +L YQLKGL WL +
Sbjct: 521 ECLWIEKAPTASINIDL--PFTN--LEWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHP 576
Query: 458 GILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPY 517
ILADEMGLGKT+Q ++F++ L + P LV+ P + + NW E+ ++ P L+
Sbjct: 577 CILADEMGLGKTVQVISFISVLFYRHKCF-PVLVIVPHATVANWERELKKWAPFLQINVL 635
Query: 518 WGGLQERMVLR--KNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQA 575
G + R ++R + IN K + H+L+ S + + R+ +W+ +++DE Q
Sbjct: 636 VGSEKNRSLVRDYRLINQKD--PKHVSTHVLVISASNVEREISLLRKFQWKVLIVDEGQR 693
Query: 576 IKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKG 635
+K+ S + L S +LLLTGTP+QNN+ EL+ LL F+ P ++ E + +S
Sbjct: 694 LKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKINAAE-LEKRYS-- 750
Query: 636 IESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQ 695
++ ++ LH ILKPF LRRVK +V+ TK EV++ ++ Q+ Y+
Sbjct: 751 ---------IIDTEKVTELHQILKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYK 801
Query: 696 AIKNKISLAGLFDNSRGHLNE-----KKILNLMNIVIQLRKVCNHPELF 739
+I +K +L+ L N G+ N ++ +L NI++QLRK HP ++
Sbjct: 802 SILSK-NLS-LLRNITGYANTSSSGGQRTTSLNNILMQLRKTLAHPYIY 848
Score = 290 (107.1 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 74/192 (38%), Positives = 111/192 (57%)
Query: 990 LKRLLIGFARTSENIGPRKPGGPHQLIQEIDSEL--P-VAKPALQ---LTYQIFGSCPPM 1043
L R + G+A TS + G R + ++ ++ L P + P ++ L Y++ M
Sbjct: 810 LLRNITGYANTSSSGGQRTTS-LNNILMQLRKTLAHPYIYSPDIEDRNLPYEL-----AM 863
Query: 1044 QSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
+S + A S K L +L+ +L HR+LLF+Q + L+ILED+ Y+ Y R D
Sbjct: 864 RSLEEA-----SCKFLILRLLVPKLITRGHRILLFSQFIQQLDILEDWFEYKNIAYARFD 918
Query: 1104 GSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAM 1162
G+S+ M+R+ + F S++ FLLSTRAGG+GINL +ADTVI + D+NP D+QA+
Sbjct: 919 GASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADTVIILDPDFNPHQDMQAI 978
Query: 1163 DRAHRLGQTKDV 1174
RAHR GQ K V
Sbjct: 979 ARAHRYGQKKKV 990
Score = 50 (22.7 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 792 SSEILCSAVGHGISRELFQK-------RFNIFSAENVYQSIFSLASGS-DASPVKSETFG 843
S + L S + HG +R LF++ ++N +S E + S D S +KS FG
Sbjct: 1029 SEKDLESILRHG-ARALFEEAGDEPSIKYNEYSVELLISEAEKQEDTSTDESDIKSNKFG 1087
Query: 844 FTHLMD 849
F + D
Sbjct: 1088 FFRVWD 1093
Score = 38 (18.4 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 737 ELFERNEGSSYLY 749
E F R++G SYL+
Sbjct: 394 EYFVRSKGKSYLH 406
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 529 (191.3 bits), Expect = 8.6e-58, Sum P(2) = 8.6e-58
Identities = 114/289 (39%), Positives = 177/289 (61%)
Query: 437 LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPAS 496
L++YQL GL WL + + +G + ILADEMGLGKTIQ ++FL +L E ++GPFL+V P S
Sbjct: 156 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLS 215
Query: 497 VLNNWADEISRFCPDLKTLPYWGGLQERMVLRKN--INPKRLYRRDAGFHILITSYQLLV 554
L +W EI + P + + Y G + R ++R + ++P+ + F+IL+T+Y++L+
Sbjct: 216 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT---KRLKFNILLTTYEILL 272
Query: 555 ADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL 614
D+ + + W ++ +DEA +K+ +S+ +KTL+ F +RLL+TGTP+QN++ ELW+LL
Sbjct: 273 KDKSFLGGLNWVFIGIDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 332
Query: 615 HFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISEL 674
HFIMP F S E F E EHG E LH L+PF+LRRVKKDV L
Sbjct: 333 HFIMPEKFSSWEDFEE----------EHGKG-REFGYASLHKELEPFLLRRVKKDVEKSL 381
Query: 675 TTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLM 723
K E ++ ++S+ Q+ +Y+ I + + L S+G + LN+M
Sbjct: 382 PAKVEQILRMEMSALQKQYYKWILTR-NYKALSKGSKG--STSGFLNIM 427
Score = 157 (60.3 bits), Expect = 8.6e-58, Sum P(2) = 8.6e-58
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
L+ SGKL LD LL RLR +RVL+F+QM +ML+IL +Y+ YR++ + RLDGS
Sbjct: 458 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 517
Query: 1111 RRDMVRDF-----QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNP 1155
R+ + F ++ + +F + L+ ++ L +L + WNP
Sbjct: 518 RKQALDHFNAEGSENLTSLFCYHLTRKSLTLKTHLRNGHNIDIIAFFWNP 567
Score = 145 (56.1 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 38/122 (31%), Positives = 63/122 (51%)
Query: 626 EQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCK 685
E+F+ W E E G E LH L+PF+LRRVKKDV L K E ++ +
Sbjct: 338 EKFSSW-----EDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 392
Query: 686 LSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS 745
+S+ Q+ +Y+ I + + L S+G + +NI+++L+K CNH L + + +
Sbjct: 393 MSALQKQYYKWILTR-NYKALSKGSKGSTS-----GFLNIMMELKKCCNHCYLIKPPDDN 446
Query: 746 SY 747
+
Sbjct: 447 EF 448
Score = 40 (19.1 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 1061 LDILLKR-LRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
L+ LL+R ++A +VL ++ ML +L N K ++ L+G S
Sbjct: 1084 LNYLLQRDMKA--FKVLKIKVLSYMLMLLHPSENSCKTKFNELNGDS 1128
Score = 39 (18.8 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 305 LNFLIQQTELYSHFM 319
LN+L + ELY F+
Sbjct: 195 LNYLFHEHELYGPFL 209
>FB|FBgn0022787 [details] [associations]
symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0006963 "positive regulation of antibacterial
peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
Length = 1924
Score = 416 (151.5 bits), Expect = 3.5e-57, Sum P(2) = 3.5e-57
Identities = 111/345 (32%), Positives = 175/345 (50%)
Query: 415 LHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMA 474
L NP ++P + P L+ YQ G+ WL + L+GIL D+MGLGKT+Q +
Sbjct: 1332 LFNPKSIP---NYKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTIC 1388
Query: 475 FLA--HLAEEK-NIWG-PFLVVAPASVLNNWADEISRFCPD---LKTLPYWGGLQERMVL 527
LA H+ + N+ P LV+ P ++ +W E+ +F L+ L Y+G R L
Sbjct: 1389 ILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKL 1448
Query: 528 RKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTL 587
R +I K ++++ SY + D +F + + Y VLDE IK+ + K +
Sbjct: 1449 RSDIGTK--------CNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAI 1500
Query: 588 LSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLN 647
+RL+L+GTPIQNN+ ELW+L F+MP + +QF + FS+ I S + +
Sbjct: 1501 KRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAK 1560
Query: 648 EHQ-----LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKI- 701
E + + LH + PF+LRRVK+DV+ +L K + C+LS Q Y+ NK
Sbjct: 1561 EQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHL 1620
Query: 702 --SLAGLFDNSRGHLNEKKI---LNLMNIVIQLRKVCNHPELFER 741
L L D+S + + + ++ + L+ VCNHP+L R
Sbjct: 1621 KDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLR 1665
Score = 272 (100.8 bits), Expect = 3.5e-57, Sum P(2) = 3.5e-57
Identities = 58/106 (54%), Positives = 70/106 (66%)
Query: 1073 HRVLLFAQMTKMLNILEDYMNYR---KYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLL 1129
HR L+F Q+ ML+I+E + R YLRLDGS R+D+V +F I V LL
Sbjct: 1715 HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLL 1774
Query: 1130 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVS 1175
+T GGLG+NLT ADTVIF E DWNP DLQAMDRAHR+GQ K V+
Sbjct: 1775 TTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVN 1820
Score = 43 (20.2 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 458 GILADEMGLGKTIQAMAFLAHLAEEKNIW 486
G L EM K + + L L + KN W
Sbjct: 419 GTLVKEMEASKVQRIVNILLQLIQHKNEW 447
Score = 38 (18.4 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 652 NRLHAILKPFMLRRVKKDVISELTT-KTEVMVH 683
++L+ ++KP M +K++ +L E +VH
Sbjct: 952 DKLNPVVKPLM-ESIKREQCLQLQQLSAEFLVH 983
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 279 (103.3 bits), Expect = 7.7e-57, Sum P(3) = 7.7e-57
Identities = 74/205 (36%), Positives = 106/205 (51%)
Query: 544 HILITSYQ-LLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
HILIT+Y L + +K + VKWQY VLDE I++ +S T NR++L+GTP
Sbjct: 442 HILITTYVGLRIHSDKLLK-VKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTP 500
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN-----RLHAI 657
IQNN+ ELW+L FI P + F + F I T + Q L +
Sbjct: 501 IQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDL 560
Query: 658 LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
+ P++LRRVK DV +L K E+++ CKL+ Q++ Y L L + +
Sbjct: 561 ISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKY--------LEFLHSSDLNQIQNG 612
Query: 718 KILNLMNIVIQLRKVCNHPELFERN 742
K L I I LRK+CNHP+L +R+
Sbjct: 613 KRNVLFGIDI-LRKICNHPDLLDRD 636
Score = 264 (98.0 bits), Expect = 7.7e-57, Sum P(3) = 7.7e-57
Identities = 54/126 (42%), Positives = 84/126 (66%)
Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRK-----YRYLRLDGSSTIM 1109
SGK+Q + LL + ++ LLF Q +ML+ILE++++ + YLR+DG++ I
Sbjct: 650 SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIK 709
Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
R+ +V F + S VFLL+TR GGLG+NLT A+ +I ++ DWNP+ D+QA +RA R+G
Sbjct: 710 GRQSLVDRFNNES-FDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIG 768
Query: 1170 QTKDVS 1175
Q ++VS
Sbjct: 769 QKREVS 774
Score = 190 (71.9 bits), Expect = 7.7e-57, Sum P(3) = 7.7e-57
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 423 VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
+ S + P L YQ +QWL Y+Q GI+ DEMGLGKTIQ +AF+A L
Sbjct: 283 LNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHS 342
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTL 515
+ GP L+V PA+V+ W +E + P L+T+
Sbjct: 343 GLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTV 375
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 615 (221.5 bits), Expect = 9.5e-57, P = 9.5e-57
Identities = 132/329 (40%), Positives = 202/329 (61%)
Query: 424 TSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
T ++P K G L+EYQ++GL WL++ YE L+GILADEMGLGKT+Q ++FL +L
Sbjct: 125 TVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYI 184
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
K+I GPF+V+ P S L+NW E +++ PD+ + G ++R + K+ +LY A
Sbjct: 185 KHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD----QLYT--AK 238
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F +LITS+++++ ++ ++ +W+Y+V+DEA IK+ +S K + F RNRLL+TGTP
Sbjct: 239 FDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTP 298
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLHAILKP 660
+QNN+ ELWALL+F++P +F +QF+E F E E + ++ LH +L P
Sbjct: 299 LQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSP 358
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-I 719
F+LRRVK DV L K E V+ ++ Q +Y+ + K D G + +++
Sbjct: 359 FLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKD-----IDAVNGVVGKREGK 413
Query: 720 LNLMNIVIQLRKVCNHPELFERNE-GSSY 747
L+NIV+QLRK CNHP LF+ E G Y
Sbjct: 414 TRLLNIVMQLRKCCNHPYLFDGAEPGPPY 442
Score = 385 (140.6 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 101/242 (41%), Positives = 144/242 (59%)
Query: 936 EDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLI 995
+D VS +LLS LL + ++ P I + N MT+ Q + W KRLL
Sbjct: 345 QDKAVSELHQLLSPF-LLRRVKADVEKSLLPKI-----ETNVYIGMTDMQVE-WYKRLLE 397
Query: 996 -GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCP-PMQSFDPAKLLT 1053
+ +G R+ G +L+ I +L + Y G+ P P + D L+
Sbjct: 398 KDIDAVNGVVGKRE--GKTRLLN-IVMQL---RKCCNHPYLFDGAEPGPPYTTDE-HLVY 450
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
+SGK+ LD +LK+ +AE RVL+F+QM+++L+ILEDY +R Y Y R+DGS++ DR +
Sbjct: 451 NSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIE 510
Query: 1114 MVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1172
+ ++ S+ F+FLL+TRAGGLGINLT+AD VI Y+SDWNP DLQAMDRAHR+GQ K
Sbjct: 511 AIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKK 570
Query: 1173 DV 1174
V
Sbjct: 571 QV 572
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 615 (221.5 bits), Expect = 9.5e-57, P = 9.5e-57
Identities = 132/329 (40%), Positives = 202/329 (61%)
Query: 424 TSTVQTPELFK-GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
T ++P K G L+EYQ++GL WL++ YE L+GILADEMGLGKT+Q ++FL +L
Sbjct: 125 TVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYI 184
Query: 483 KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
K+I GPF+V+ P S L+NW E +++ PD+ + G ++R + K+ +LY A
Sbjct: 185 KHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD----QLYT--AK 238
Query: 543 FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
F +LITS+++++ ++ ++ +W+Y+V+DEA IK+ +S K + F RNRLL+TGTP
Sbjct: 239 FDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTP 298
Query: 603 IQNNMAELWALLHFIMPTLFDSHEQFNEWFSK--GIESHAEHGGTLNEHQLNRLHAILKP 660
+QNN+ ELWALL+F++P +F +QF+E F E E + ++ LH +L P
Sbjct: 299 LQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSP 358
Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK-I 719
F+LRRVK DV L K E V+ ++ Q +Y+ + K D G + +++
Sbjct: 359 FLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKD-----IDAVNGVVGKREGK 413
Query: 720 LNLMNIVIQLRKVCNHPELFERNE-GSSY 747
L+NIV+QLRK CNHP LF+ E G Y
Sbjct: 414 TRLLNIVMQLRKCCNHPYLFDGAEPGPPY 442
Score = 385 (140.6 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 101/242 (41%), Positives = 144/242 (59%)
Query: 936 EDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLI 995
+D VS +LLS LL + ++ P I + N MT+ Q + W KRLL
Sbjct: 345 QDKAVSELHQLLSPF-LLRRVKADVEKSLLPKI-----ETNVYIGMTDMQVE-WYKRLLE 397
Query: 996 -GFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCP-PMQSFDPAKLLT 1053
+ +G R+ G +L+ I +L + Y G+ P P + D L+
Sbjct: 398 KDIDAVNGVVGKRE--GKTRLLN-IVMQL---RKCCNHPYLFDGAEPGPPYTTDE-HLVY 450
Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
+SGK+ LD +LK+ +AE RVL+F+QM+++L+ILEDY +R Y Y R+DGS++ DR +
Sbjct: 451 NSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIE 510
Query: 1114 MVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1172
+ ++ S+ F+FLL+TRAGGLGINLT+AD VI Y+SDWNP DLQAMDRAHR+GQ K
Sbjct: 511 AIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKK 570
Query: 1173 DV 1174
V
Sbjct: 571 QV 572
WARNING: HSPs involving 309 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1196 1121 0.00089 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 559
No. of states in DFA: 637 (68 KB)
Total size of DFA: 511 KB (2236 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 90.73u 0.09s 90.82t Elapsed: 00:00:08
Total cpu time: 90.86u 0.09s 90.95t Elapsed: 00:00:09
Start: Tue May 21 02:08:40 2013 End: Tue May 21 02:08:49 2013
WARNINGS ISSUED: 2